BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044251
(686 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protein At5g50280,
chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2
SV=1
Length = 723
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/614 (67%), Positives = 487/614 (79%), Gaps = 32/614 (5%)
Query: 92 DPLLKFFKSQT----PTQDPPALGKLSLQKNRRSSWHLSPHVNSP--------------- 132
DP+LKFFKS+T T DP K SLQKNRR+SWHL+P P
Sbjct: 98 DPILKFFKSRTLTSESTADPARESKFSLQKNRRTSWHLAPDFADPETEIESKPEESVFVT 157
Query: 133 NQS--------ES----DINDISLEDEAKQQMGSLPDGIGR-VSKRECVQLLELMANDGL 179
NQ ES +I +++ + Q +G + G R VS ECV+ L +M G
Sbjct: 158 NQQTLGVHIPFESGVAREILELAKNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGF 217
Query: 180 LGCCLYFYEWMRLQEPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYN 239
+ CLYFYEWM LQEPSL SPRACSVLF +LGR RM D +++L NLP +EFRD +YN
Sbjct: 218 VKSCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYN 277
Query: 240 AAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNR 299
AAISGL RYDDAW+ YEAM+ NV PD+VTC+I+IT +RK GRSAKE WE FEKM+
Sbjct: 278 AAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSE 337
Query: 300 KGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEE 359
KGVK SQ+V G L+KSFCDEGLK EAL+IQ EMEKKGI SN IVYNTL++AY KSN +EE
Sbjct: 338 KGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEE 397
Query: 360 AEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLIS 419
EGLF EM+ KGLKP++AT+NILMDAY+RRMQP+IVE LL E++D+GLEPN KSYTCLIS
Sbjct: 398 VEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLIS 457
Query: 420 AYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIK 479
AYGR +KMSDMAADAFLRMK+VG+KP+SHSYTALIHAYSV GWHEKAYA+FE M +E IK
Sbjct: 458 AYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIK 517
Query: 480 PSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDV 539
PS+ETYT++LDAFRRSGDTG +M+IWKLM+ EK++GTR+T+N LLDGFAKQG Y+EARDV
Sbjct: 518 PSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
Query: 540 VSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVR 599
VSEF K+GLQP++MTYNMLMNAY RGGQ +KLPQLLKEMA LN+KPDS+TYSTMIYAFVR
Sbjct: 578 VSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Query: 600 VRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRRDKSAILGIINSKMGMVK 659
VRDFKRAFFYHK MVKSGQVPD +SYEKLR+IL+ K TKNR+DK+AILGIINSK G VK
Sbjct: 638 VRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKFGRVK 697
Query: 660 AKKKGKKDEFWKYK 673
AK KGKKDEFWKYK
Sbjct: 698 AKTKGKKDEFWKYK 711
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 190/392 (48%), Gaps = 2/392 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y I+G F G D A+ Y M + PD VT + +I A+ K ++ +A E
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK-AQAMDKAMEV 253
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
M + GV +++ +C G EA+ +M G+ + + Y+ L++ CK
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ + EA +F M +GLKP T+ L+ Y+ + + LL + G+ P+
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
++ LI AY + K+ D A F +M++ G+ P + +Y A+I G E A FE M
Sbjct: 374 FSILICAYAKQGKV-DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ E + P Y +L+ ++ M+ + + FN ++D K+G+
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+E+ + +IG++P ++TYN L+N Y G+ + +LL M ++ +KP++VTYST+
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
I + ++ + A K+M SG PD+ +Y
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 215/455 (47%), Gaps = 37/455 (8%)
Query: 206 LFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANN 265
+ L +A+ D M + + ++ D YN+ + G G+ +A + M ++
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 266 VRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEG----- 320
V PD VT S+++ + KNGR EA + F+ M ++G+K G L++ + +G
Sbjct: 297 VEPDVVTYSLLMDYLCKNGR-CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355
Query: 321 -------LKN-----------------------EALIIQMEMEKKGIPSNAIVYNTLINA 350
++N +A+++ +M ++G+ NA+ Y +I
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415
Query: 351 YCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPN 410
CKS ++E+A F++M +GL P + +N L+ + E E+L+LE+ D G+ N
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 411 AKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAF 470
+ +I ++ + ++ + + F M R+G+KP +Y LI+ Y + G ++A
Sbjct: 476 TIFFNSIIDSHCKEGRVIE-SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 471 ENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQ 530
M+ +KP+ TY+ L++ + + + ++K M S V +T+NI+L G +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 531 GQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTY 590
+ A+++ + G Q L TYN++++ + T Q+ + + +++K ++ T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 591 STMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
+ MI A ++V A +G VP+ +Y
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 194/418 (46%), Gaps = 5/418 (1%)
Query: 214 RMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAM---EANNVRPDH 270
R D + ++ + + + + YN + GL R +A + M PD
Sbjct: 137 RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDV 196
Query: 271 VTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQM 330
V+ + +I K G S K A+ + +M +G+ +++ + C ++A+ +
Sbjct: 197 VSYTTVINGFFKEGDSDK-AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 331 EMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRM 390
M K G+ + + YN++++ YC S Q +EA G ++M++ G++P T+++LMD +
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 391 QPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSY 450
+ K+ + GL+P +Y L+ Y + +M L M R GI P + +
Sbjct: 316 RCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL-MVRNGIHPDHYVF 374
Query: 451 TALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMS 510
+ LI AY+ G ++A F M ++ + P+ TY A++ +SG M ++ M+
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 511 EKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSK 570
E + + +N L+ G ++ A +++ E G+ + +N +++++ + G+ +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 571 LPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+L + M + +KP+ +TY+T+I + A MV G P+ +Y L
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 176/378 (46%), Gaps = 6/378 (1%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D +V++ I G+ D A + M + P+ VT +I + K+GR ++A +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR-VEDAMLY 428
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
FE+M +G+ V +L+ C A + +EM +GI N I +N++I+++CK
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
++ E+E LF+ M G+KP T+N L++ Y + + KLL + +GL+PN +
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y+ LI+ Y + +M D A F M+ G+ P +Y ++ A + +
Sbjct: 549 YSTLINGYCKISRMED-ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 607
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWK--LMMSEKVEGTRVTFNILLDGFAKQG 531
+ + TY +L ++ T +++++ +M K+E TFNI++D K G
Sbjct: 608 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEAR--TFNIMIDALLKVG 665
Query: 532 QYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYS 591
+ EA+D+ F GL P TY ++ G +L QL M DS +
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725
Query: 592 TMIYAFVRVRDFKRAFFY 609
++ ++ + RA Y
Sbjct: 726 FIVRELLQRGEITRAGTY 743
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 166/370 (44%), Gaps = 6/370 (1%)
Query: 263 ANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLK 322
A+ V PD T I+I + GR + + +KG ++ L+K C +
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGR-LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRT 138
Query: 323 NEAL-IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEM---KTKGLKPTSAT 378
++A+ I+ M + G N YN L+ C N+ +EA L M + G P +
Sbjct: 139 SDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198
Query: 379 FNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRM 438
+ +++ + + + E+ D G+ P+ +Y +I+A + + M D A + M
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM-DKAMEVLNTM 257
Query: 439 KRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDT 498
+ G+ P +Y +++H Y G ++A + M + ++P + TY+ L+D ++G
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 499 GMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNML 558
KI+ M ++ T+ LL G+A +G +E ++ + G+ P +++L
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 559 MNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQ 618
+ AY + G+ + + +M + P++VTY +I + + A Y +QM+ G
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 619 VPDVKSYEKL 628
P Y L
Sbjct: 438 SPGNIVYNSL 447
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 169/380 (44%), Gaps = 12/380 (3%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y I GR D + A + R D + + ++ + + R++
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL-IIQMEMEKK--GIPSNAIVYNTLINA 350
+M G + L+K CDE EAL ++ M + + G P + + Y T+IN
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 351 YCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPN 410
+ K ++A + EM +G+ P T+N ++ A + + ++L + G+ P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 411 AKSYTCLISAY---GRPRKMSDMAADAFL-RMKRVGIKPTSHSYTALIHAYSVGGWHEKA 466
+Y ++ Y G+P++ A FL +M+ G++P +Y+ L+ G +A
Sbjct: 266 CMTYNSILHGYCSSGQPKE-----AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 467 YAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDG 526
F++M + +KP I TY LL + G M + LM+ + F+IL+
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 527 FAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPD 586
+AKQG+ +A V S+ + GL P +TY ++ + G+ ++M + P
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 587 SVTYSTMIYAFVRVRDFKRA 606
++ Y+++I+ ++RA
Sbjct: 441 NIVYNSLIHGLCTCNKWERA 460
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
+++ L + ++ DD + +F+NL +A +N I L GR D+A + A +
Sbjct: 620 NIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEG 320
N + P++ T +M + G +E + F M G + ++ +++ G
Sbjct: 680 NGLVPNYWTYRLMAENIIGQGL-LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 192/410 (46%), Gaps = 8/410 (1%)
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMR 281
+FK + +S+ + YN I G + G D A ++ ME P+ VT + +I
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 282 KNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNA 341
K R + ++ M KG++ + ++ C EG E + EM ++G +
Sbjct: 252 K-LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 342 IVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLE 401
+ YNTLI YCK +A + EM GL P+ T+ L+ + + + L +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 402 LQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGG 461
++ GL PN ++YT L+ + + M++ A M G P+ +Y ALI+ + V G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNE-AYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 462 WHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFN 521
E A A E+M + + P + +Y+ +L F RS D +++ + M+ + ++ +T++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 522 ILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATL 581
L+ GF +Q + EA D+ E ++GL P TY L+NAY G K QL EM
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 582 NIKPDSVTYSTMIYAF---VRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ PD VTYS +I R R+ KR ++ VP +Y L
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLL---KLFYEESVPSDVTYHTL 596
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 208/474 (43%), Gaps = 54/474 (11%)
Query: 196 SLVSPRACSVLFPVLGRARMG--DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDD 253
S VSP + + G G D + LF + + YN I G + DD
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 254 AWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALM 313
+K +M + P+ ++ +++I + + GR KE +MNR+G L + L+
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGR-MKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 314 KSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLK 373
K +C EG ++AL++ EM + G+ + I Y +LI++ CK+ + A +M+ +GL
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 374 PTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAAD 433
P T+ L+D +S++ ++L E+ D G P+ +Y LI+ + KM D A
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA- 436
Query: 434 AFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFR 493
MK G+ P SY+ ++ + ++A M+ + IKP TY++L+ F
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 494 RSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLM 553
T +++ M+ + T+ L++ + +G +A + +E + G+ P ++
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 554 TYNMLMNAYGRGGQTSKLPQLL---------------------------KEMATL----- 581
TY++L+N + +T + +LL K + +L
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 582 ------------------NIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSG 617
N KPD Y+ MI+ R D ++A+ +K+MVKSG
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 199/410 (48%), Gaps = 3/410 (0%)
Query: 221 VLFKNLPQSKE--FRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMIT 278
++FK+L ++ + + + V++ + D A +A+ P ++ + ++
Sbjct: 118 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 177
Query: 279 AMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIP 338
A ++ R+ A F++M V + L++ FC G + AL + +ME KG
Sbjct: 178 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 237
Query: 339 SNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKL 398
N + YNTLI+ YCK ++++ L + M KGL+P ++N++++ R + + V +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 399 LLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYS 458
L E+ G + +Y LI Y + A M R G+ P+ +YT+LIH+
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ-ALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 459 VGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRV 518
G +A + M + P+ TYT L+D F + G ++ + M + V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 519 TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
T+N L++G G+ +A V+ + + GL P +++Y+ +++ + R + ++ +EM
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 579 ATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
IKPD++TYS++I F R K A +++M++ G PD +Y L
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 154/316 (48%), Gaps = 6/316 (1%)
Query: 331 EMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRM 390
EM + + N YN LI +C + ++ A LF +M+TKG P T+N L+D Y +
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 391 QPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSY 450
+ + KLL + GLEPN SY +I+ R +M +++ M R G +Y
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF-VLTEMNRRGYSLDEVTY 313
Query: 451 TALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMS 510
LI Y G +A MLR + PS+ TYT+L+ + ++G+ M+ M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 511 EKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSK 570
+ T+ L+DGF+++G EA V+ E G P+++TYN L+N + G+
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 571 LPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
+L++M + PD V+YST++ F R D A ++MV+ G PD +Y L
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL-- 491
Query: 631 ILDVKVATKNRRDKSA 646
++ + RR K A
Sbjct: 492 ---IQGFCEQRRTKEA 504
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 176/379 (46%), Gaps = 17/379 (4%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D YN I G G + A + M + + P +T + +I +M K G + A EF
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG-NMNRAMEF 367
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++M +G+ ++ L+ F +G NEA + EM G + + YN LIN +C
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ ++E+A + ++MK KGL P +++ ++ + R + ++ E+ + G++P+ +
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y+ LI + R+ + A D + M RVG+ P +YTALI+AY + G EKA M
Sbjct: 488 YSSLIQGFCEQRRTKE-ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLD-------- 525
+ + + P + TY+ L++ + T ++ + E+ + VT++ L++
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 526 -------GFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
GF +G EA V +P YN++++ + R G K L KEM
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 579 ATLNIKPDSVTYSTMIYAF 597
+VT ++ A
Sbjct: 667 VKSGFLLHTVTVIALVKAL 685
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 22/352 (6%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
YNA I+G G+ +DA E M+ + PD V+ S +++ ++ EA +M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS-YDVDEALRVKREM 476
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
KG+K +L++ FC++ EA + EM + G+P + Y LINAYC L
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
E+A L EM KG+ P T+++L++ +++ + ++LLL+L P+ +Y L
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I + K S +LI + + G +A FE+ML +
Sbjct: 597 IE-----------------NCSNIEFK----SVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
KP Y ++ R+GD ++K M+ VT L+ K+G+ E
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVT 589
V+ + +L+ R G + +L EMA P+ ++
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 201/427 (47%), Gaps = 7/427 (1%)
Query: 220 MVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITA 279
+++F+ P+ + YN I + GR +A ME PD ++ S ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 280 MRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPS 339
+ G K W+ E M RKG+K + + G+++ C EA EM ++GI
Sbjct: 291 YCRFGELDK-VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 340 NAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLL 399
+ +VY TLI+ +CK + A F EM ++ + P T+ ++ + + KL
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 400 LELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSV 459
E+ GLEP++ ++T LI+ Y + M D A M + G P +YT LI
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKD-AFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 460 GGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVT 519
G + A M + ++P+I TY ++++ +SG+ +K+ + + VT
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 520 FNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMA 579
+ L+D + K G+ +A++++ E GLQPT++T+N+LMN + G +LL M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 580 TLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATK 639
I P++ T+++++ + + K A +K M G PD K+YE L VK K
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL-----VKGHCK 643
Query: 640 NRRDKSA 646
R K A
Sbjct: 644 ARNMKEA 650
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 180/395 (45%), Gaps = 2/395 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y+ ++G G D WK E M+ ++P+ +I + + + A EA E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA-EAEEA 338
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M R+G+ V L+ FC G A EM + I + + Y +I+ +C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ EA LF EM KGL+P S TF L++ Y + + ++ + G PN +
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
YT LI + + D A + M ++G++P +Y ++++ G E+A
Sbjct: 459 YTTLIDGLCKEGDL-DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ TYT L+DA+ +SG+ +I K M+ + ++ T VTFN+L++GF G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+ +++ G+ P T+N L+ Y + K+M + + PD TY +
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ + R+ K A+F ++M G V +Y L
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 182/395 (46%), Gaps = 1/395 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D V++ L G +A + +E M + +C++ +T + K+ A
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F + GV + ++ C G EA + + ME KG + I Y+T++N YC+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L++ L + MK KGLKP S + ++ R + E+ E+ G+ P+
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
YT LI + + R A+ F M I P +YTA+I + G +A F M
Sbjct: 354 YTTLIDGFCK-RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ ++P T+T L++ + ++G ++ M+ VT+ L+DG K+G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
A +++ E KIGLQP + TYN ++N + G + +L+ E + D+VTY+T+
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ A+ + + +A K+M+ G P + ++ L
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
YN+ ++GL G ++A K EA + D VT + ++ A K+G K A E ++M
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK-AQEILKEM 552
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
KG++ + LM FC G+ + + M KGI NA +N+L+ YC N L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
+ A ++++M ++G+ P T+ L+ + + + L E++ G + +Y+ L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGI 443
I + + +K + A + F +M+R G+
Sbjct: 673 IKGFLKRKKFLE-AREVFDQMRREGL 697
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 13/179 (7%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMIT--AMRKNGRSAKEAWEFFE 295
+N ++G G +D K M A + P+ T + ++ +R N K A ++
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN---LKAATAIYK 620
Query: 296 KMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSN 355
M +GV + L+K C EA + EM+ KG + Y+ LI + K
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQP--------EIVEKLLLELQDMG 406
+ EA +F +M+ +GL F+ D + +P EI+E L++ Q G
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRG 739
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 210/495 (42%), Gaps = 88/495 (17%)
Query: 221 VLFKNLPQSKEFRDAH----------------VYNAAISGLFWCGRYDDAWKAYEAMEAN 264
+L + Q+++ R+AH NA I L G + AW Y+ + +
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 265 NVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNE 324
V + T +IM+ A+ K+G+ K F ++ KGV L+ ++ +GL E
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEK-VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 325 ALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM- 383
A + M KG YNT+IN CK + E A+ +F EM GL P S T+ L+
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 384 ----------------DAYSRRMQPEIV---------------EKLLL---ELQDMGLEP 409
D SR + P++V +K L+ +++ GL P
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 410 NAKSYTCLISAYGRP----------------------------------RKMSDMAADAF 435
+ YT LI Y R RKM A F
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 436 LRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRS 495
M + P S++ T LI + G + A F+ M + I+ + TY LLD F +
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 496 GDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTY 555
GD +IW M+S+++ T ++++IL++ +G EA V E ++PT+M
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 556 NMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQM-- 613
N ++ Y R G S L++M + PD ++Y+T+IY FVR + +AF K+M
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 614 VKSGQVPDVKSYEKL 628
+ G VPDV +Y +
Sbjct: 649 EQGGLVPDVFTYNSI 663
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 189/377 (50%), Gaps = 4/377 (1%)
Query: 249 GRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEV 308
G + K + M + +V PD V S M++ ++G K A +F + G+ +
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK-ALMYFNSVKEAGLIPDNVI 412
Query: 309 VGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMK 368
L++ +C +G+ + A+ ++ EM ++G + + YNT+++ CK L EA+ LF EM
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 369 TKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMS 428
+ L P S T IL+D + + + +L ++++ + + +Y L+ +G+ +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI- 531
Query: 429 DMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTAL 488
D A + + M I PT SY+ L++A G +A+ ++ M+ + IKP++ ++
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 489 LDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVS--EFGKI 546
+ + RSG+ + M+SE +++N L+ GF ++ +A +V E +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 547 GLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRA 606
GL P + TYN +++ + R Q + +L++M + PD TY+ MI FV + A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 607 FFYHKQMVKSGQVPDVK 623
F H +M++ G PD K
Sbjct: 712 FRIHDEMLQRGFSPDDK 728
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 176/380 (46%), Gaps = 2/380 (0%)
Query: 253 DAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGAL 312
+A +A+ + + C+ +I ++ + G + AW +++++R GV ++ + +
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGW-VELAWGVYQEISRSGVGINVYTLNIM 241
Query: 313 MKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGL 372
+ + C +G + ++++KG+ + + YNTLI+AY +EEA L M KG
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 373 KPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAA 432
P T+N +++ + + E +++ E+ GL P++ +Y L+ + + +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE-TE 360
Query: 433 DAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAF 492
F M+ + P +++++ ++ G +KA F ++ + P YT L+ +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 493 RRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTL 552
R G + M + M+ + VT+N +L G K+ EA + +E + L P
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 553 MTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQ 612
T +L++ + + G +L ++M I+ D VTY+T++ F +V D A
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 613 MVKSGQVPDVKSYEKLRSIL 632
MV +P SY L + L
Sbjct: 541 MVSKEILPTPISYSILVNAL 560
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 154/365 (42%), Gaps = 22/365 (6%)
Query: 265 NVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNE 324
N + ++ S MI + ++GR + + R GV E+V +L +F + G
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVS-RLEIVNSLDSTFSNCG---- 162
Query: 325 ALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMD 384
SN V++ LI Y ++ +L EA F +++KG + N L+
Sbjct: 163 --------------SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208
Query: 385 AYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFL-RMKRVGI 443
+ R E+ + E+ G+ N + +++A + KM + FL +++ G+
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGT--FLSQVQEKGV 266
Query: 444 KPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMK 503
P +Y LI AYS G E+A+ M + P + TY +++ + G +
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 504 IWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYG 563
++ M+ + T+ LL K+G +E V S+ + P L+ ++ +M+ +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 564 RGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVK 623
R G K + + PD+V Y+ +I + R A +M++ G DV
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 624 SYEKL 628
+Y +
Sbjct: 447 TYNTI 451
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 117/226 (51%), Gaps = 5/226 (2%)
Query: 200 PRACSVLFPVLGRARMGD--DLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKA 257
P + ++ + G ++G+ + M LF+ + + + D YN + G G D A +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 258 YEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFC 317
+ M + + P ++ SI++ A+ G A EA+ +++M K +K + + +++K +C
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLA-EAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 318 DEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTK--GLKPT 375
G ++ +M +G + I YNTLI + + + +A GL ++M+ + GL P
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 376 SATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAY 421
T+N ++ + R+ Q + E +L ++ + G+ P+ +YTC+I+ +
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 219/466 (46%), Gaps = 39/466 (8%)
Query: 204 SVLFPVLGRARMGDDLMVL--FKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAM 261
S++ L R+ D +M+L +K + + K D + N I G G A +
Sbjct: 236 SLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMA 295
Query: 262 EANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGL 321
+A + T +I+A+ +GR+ EA FE++ + G+K AL+K + G
Sbjct: 296 QATGLSAKTATLVSIISALADSGRTL-EAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 322 KNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNI 381
+A + EMEK+G+ + Y+ LI+AY + + E A + +EM+ ++P S F+
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 414
Query: 382 LMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRV 441
L+ + R + + ++L E++ +G++P+ + Y +I +G+ + D A F RM
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL-DHAMTTFDRMLSE 473
Query: 442 GIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMM 501
GI+P ++ LI + G H A FE M R P TY +++++ M
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 502 MKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNA 561
++ M S+ + VT L+D + K G++ +A + + E +GL+P+ YN L+NA
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Query: 562 YGRGGQTSKL-------------PQLLKEMATLN----------------------IKPD 586
Y + G + + P LL + +N +KPD
Sbjct: 594 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 653
Query: 587 SVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
VTY+T++ A +RV F++ +++M+ SG PD K+ LRS L
Sbjct: 654 VVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 456 AYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWK-LMMSEKVE 514
AY+V W +K F L Y+ L+ A RS K+++ ++S+K
Sbjct: 150 AYAVVSWLQKHNLCFSYEL---------LYSILIHALGRSE------KLYEAFLLSQKQT 194
Query: 515 GTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSK--LP 572
T +T+N L+ A+ +A +++++ + G Q + Y++++ + R + L
Sbjct: 195 LTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 573 QLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAF 607
+L KE+ ++ D + +I F + D +A
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKAL 289
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 197/394 (50%), Gaps = 4/394 (1%)
Query: 236 HVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFE 295
++Y+ I + G + A ++ M A+ + P + +I + ++ ++ +E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE-KNVRQGYELLV 406
Query: 296 KMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSN 355
+M ++ + +S G ++K C G + A I EM G N ++Y TLI + +++
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
+ +A + +EMK +G+ P +N L+ S+ + + L+E+ + GL+PNA +Y
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 416 CLISAYGRPRKMSDMAADAFLR-MKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENML 474
IS Y + + +AD +++ M+ G+ P T LI+ Y G +A +A+ +M+
Sbjct: 527 AFISGYIEASEFA--SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 475 REEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYL 534
+ I +TYT L++ ++ +I++ M + + ++ +L++GF+K G
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 535 EARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMI 594
+A + E + GL P ++ YNML+ + R G+ K +LL EM+ + P++VTY T+I
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 595 YAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ + D AF +M G VPD Y L
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 177/392 (45%), Gaps = 7/392 (1%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
+A Y A ISG + A K + M V P+ V C+ +I K G+ EA
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK-VIEACSA 579
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
+ M +G+ + LM ++A I EM KGI + Y LIN + K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+++A +F EM +GL P +N+L+ + R + E ++LL E+ GL PNA +
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y +I Y + +++ A F MK G+ P S YT L+ E+A F
Sbjct: 700 YCTIIDGYCKSGDLAE-AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG----TRVTFNILLDGFAK 529
++ S + AL++ + G T + ++ +M + VT+NI++D K
Sbjct: 759 -KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 530 QGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVT 589
+G A+++ + L PT++TY L+N Y + G+ +++ + E I+PD +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 590 YSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPD 621
YS +I AF++ +A QM V D
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 189/405 (46%), Gaps = 11/405 (2%)
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYE---AMEANNVRPDHVTCSIMIT 278
LF + S A Y + I G +C R + + YE M+ N+ T ++
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEG--YC-REKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 279 AMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIP 338
M +G A+ ++M G + + + L+K+F +A+ + EM+++GI
Sbjct: 426 GMCSSG-DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 339 SNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKL 398
+ YN+LI K+ +++EA EM GLKP + T+ + Y + +K
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 399 LLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYS 458
+ E+++ G+ PN T LI+ Y + K+ + A A+ M GI + +YT L++
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIE-ACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 459 VGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRV 518
+ A F M + I P + +Y L++ F + G+ I+ M+ E + +
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 519 TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
+N+LL GF + G+ +A++++ E GL P +TY +++ Y + G ++ +L EM
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 579 ATLNIKPDSVTYSTMIYAFVRVRDFKRA---FFYHKQMVKSGQVP 620
+ PDS Y+T++ R+ D +RA F +K+ S P
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 181/431 (41%), Gaps = 40/431 (9%)
Query: 236 HVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFE 295
+ Y + G+ G D A+ + M A+ RP+ V + +I +N R +A +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG-DAMRVLK 476
Query: 296 KMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSN 355
+M +G+ +L+ +EA +EM + G+ NA Y I+ Y +++
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
+ A+ +EM+ G+ P L++ Y ++ + + D G+ +AK+YT
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 416 CLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLR 475
L++ + K+ D A + F M+ GI P SY LI+ +S G +KA + F+ M+
Sbjct: 597 VLMNGLFKNDKVDD-AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 476 EEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLE 535
E + P++ Y LL F RSG+ ++ M + + VT+ ++DG+ K G E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 536 ARDVVSEFGKIGLQPTLMTY----------------------------------NMLMNA 561
A + E GL P Y N L+N
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINW 775
Query: 562 YGRGGQTSKLPQLLKEMATLNI----KPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSG 617
+ G+T ++L + + KP+ VTY+ MI + + + A QM +
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 618 QVPDVKSYEKL 628
+P V +Y L
Sbjct: 836 LMPTVITYTSL 846
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 162/370 (43%), Gaps = 45/370 (12%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
DA Y ++GLF + DDA + + M + PD + ++I K G K A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK-ASSI 649
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F++M +G+ + + L+ FC G +A + EM KG+ NA+ Y T+I+ YCK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSR------------------------- 388
S L EA LF EMK KGL P S + L+D R
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769
Query: 389 -------------RMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAF 435
++ E++ +L+ D +PN +Y +I + + + A + F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL-EAAKELF 828
Query: 436 LRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRS 495
+M+ + PT +YT+L++ Y G + + F+ + I+P Y+ +++AF +
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 496 GDTGMMMKIWKLMMSEKV--EGTRVTFNI---LLDGFAKQGQYLEARDVVSEFGKIGLQP 550
G T + + M ++ +G +++ + LL GFAK G+ A V+ ++ P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 551 TLMTYNMLMN 560
T L+N
Sbjct: 949 DSATVIELIN 958
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 168/401 (41%), Gaps = 20/401 (4%)
Query: 229 SKEF----RDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNG 284
S+EF D ++ G G ++A + + + P C +++ A+ +
Sbjct: 141 SQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWN 200
Query: 285 RSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVY 344
R W+ ++ M + V + L+ + C G +++ K +++
Sbjct: 201 R-LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG--------NVQLGKD------VLF 245
Query: 345 NTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQD 404
T + ++ A L + M KGL P T+++L+D + + E + LL+E+
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305
Query: 405 MGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHE 464
+G+ + +Y+ LI + R +D A M GI + Y I S G E
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRN-ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 465 KAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILL 524
KA A F+ M+ + P + Y +L++ + R + ++ M + + T+ ++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 525 DGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIK 584
G G A ++V E G +P ++ Y L+ + + + ++LKEM I
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 585 PDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
PD Y+++I + + A + +MV++G P+ +Y
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 128/336 (38%), Gaps = 25/336 (7%)
Query: 327 IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY 386
I++ E G + +++ L + Y +EEA +F L P + +L+DA
Sbjct: 137 IVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDAL 196
Query: 387 SRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPR----------------KMSDM 430
R + ++ + + + + + K+Y LI A+ R + + +
Sbjct: 197 LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL 256
Query: 431 AADAFLRMKRV----GIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYT 486
D L++K G+ P ++Y LI E A + M + TY+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 487 ALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKI 546
L+D + + + M+S + ++ + +K+G +A+ +
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 547 GLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRA 606
GL P Y L+ Y R + +LL EM NI TY T++ D A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 607 FFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRR 642
+ K+M+ SG P+V Y L +K +N R
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTL-----IKTFLQNSR 467
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 169/338 (50%), Gaps = 1/338 (0%)
Query: 291 WEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINA 350
W F+ ++ G L+ V LM FC EG ++A + E+ K+ + + +NTLIN
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 351 YCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPN 410
YCK L+E L +M+ +P T++ L++A + + + L E+ GL PN
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 411 AKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAF 470
+T LI + R ++ D+ +++ +M G++P Y L++ + G A
Sbjct: 345 DVIFTTLIHGHSRNGEI-DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 471 ENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQ 530
+ M+R ++P TYT L+D F R GD ++I K M +E RV F+ L+ G K+
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 531 GQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTY 590
G+ ++A + E + G++P +TY M+M+A+ + G +LLKEM + P VTY
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 591 STMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ ++ ++ K A M+ G VPD +Y L
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 185/373 (49%), Gaps = 11/373 (2%)
Query: 274 SIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEME 333
+I++ K G + +A + F+++ ++ ++ + L+ +C G +E ++ +ME
Sbjct: 244 NILMNKFCKEG-NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 334 KKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPE 393
K + Y+ LINA CK N+++ A GLF EM +GL P F L+ +SR + +
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 394 IVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAA--DAFLRMKRVGIKPTSHSYT 451
++++ ++ GL+P+ Y L++ + K D+ A + M R G++P +YT
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFC---KNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 452 ALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSE 511
LI + GG E A + M + I+ ++AL+ + G + + M+
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 512 KVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKL 571
++ VT+ +++D F K+G ++ E G P+++TYN+L+N + GQ
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 572 PQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSI 631
LL M + + PD +TY+T++ R + + + ++ G V D+ SY+ + +
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIVNE 596
Query: 632 LDVKVATKNRRDK 644
LD A+K+ R++
Sbjct: 597 LD--RASKDHRNR 607
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 168/392 (42%), Gaps = 44/392 (11%)
Query: 275 IMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEK 334
I + RK SA F + + + +V ALM ++ D G +A I + +
Sbjct: 141 IELVVSRKGKNSASSV--FISLVEMRVTPMCGFLVDALMITYTDLGFIPDA-IQCFRLSR 197
Query: 335 K---GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ 391
K +P L++ K N G + E+ G FNILM+ + +
Sbjct: 198 KHRFDVPIRGC--GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 392 PEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYT 451
+K+ E+ L+P S+ LI+ Y + + D +M++ +P +Y+
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL-DEGFRLKHQMEKSRTRPDVFTYS 314
Query: 452 ALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSE 511
ALI+A + A+ F+ M + + P+ +T L+ R+G+ +M + ++ M+S+
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 512 KVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKL 571
++ V +N L++GF K G + AR++V + GL+P +TY L++ + RGG
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 572 PQL-----------------------------------LKEMATLNIKPDSVTYSTMIYA 596
++ L+EM IKPD VTY+ M+ A
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 597 FVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
F + D + F K+M G VP V +Y L
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 151/334 (45%), Gaps = 13/334 (3%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
+N I+G G D+ ++ ME + RPD T S +I A+ K + A F++M
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK-MDGAHGLFDEM 336
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
++G+ + + L+ G + +M KG+ + ++YNTL+N +CK+ L
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
A + M +GL+P T+ L+D + R E ++ E+ G+E + ++ L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
+ + ++ D A A M R GIKP +YT ++ A+ G + + + M +
Sbjct: 457 VCGMCKEGRVID-AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQG----QY 533
PS+ TY LL+ + G + M++ V +T+N LL+G + +Y
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQ 567
++ + IG+ L +Y ++N R +
Sbjct: 576 IQKPE-------IGIVADLASYKSIVNELDRASK 602
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 127/263 (48%), Gaps = 13/263 (4%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
++ I G G D ++Y+ M + ++PD V + ++ KNG A +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG-DLVAARNIVDG 405
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
M R+G++ + L+ FC G AL I+ EM++ GI + + ++ L+ CK +
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
+ +AE +EM G+KP T+ ++MDA+ ++ + KLL E+Q G P+ +Y
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 417 LISAYGRPRKM--SDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENML 474
L++ + +M +DM DA L +G+ P +Y L+ G H A ++ +
Sbjct: 526 LLNGLCKLGQMKNADMLLDAML---NIGVVPDDITYNTLLE-----GHHRHANSSKRYIQ 577
Query: 475 REEIK--PSIETYTALLDAFRRS 495
+ EI + +Y ++++ R+
Sbjct: 578 KPEIGIVADLASYKSIVNELDRA 600
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D +YN ++G G A + M +RPD +T + +I + G + A E
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG-DVETALEI 437
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++M++ G++L + AL+ C EG +A EM + GI + + Y +++A+CK
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ L +EM++ G P+ T+N+L++ + Q + + LL + ++G+ P+ +
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIH 455
Y L+ + R ++ +++ +GI SY ++++
Sbjct: 558 YNTLLEGHHRHAN----SSKRYIQKPEIGIVADLASYKSIVN 595
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 36/209 (17%)
Query: 425 RKMSDMAADAFLRMKRVGIKP-TSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIE 483
RK + A+ F+ + + + P AL+ Y+ G+ A F + I
Sbjct: 147 RKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIR 206
Query: 484 TYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEF 543
LLD + TG IW G Y+E D
Sbjct: 207 GCGNLLDRMMKLNPTG---TIW-------------------------GFYMEILDA---- 234
Query: 544 GKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDF 603
G + +N+LMN + + G S ++ E+ +++P V+++T+I + +V +
Sbjct: 235 ---GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 604 KRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
F QM KS PDV +Y L + L
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINAL 320
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 189/423 (44%), Gaps = 35/423 (8%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
+N + GLF G +DA + M+ PD T SI+ N + A+ A +E
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK-AEAALGVYETA 345
Query: 298 NRKGVKLSQEVVGALMKSFCDEG-LKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
GVK++ L+ + C EG ++ I+ EM K +P N ++YNT+I+ YC+
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP-NEVIYNTMIDGYCRKGD 404
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
L A + M+ +G+KP +N L+ + + E EK + +++ G+ P+ ++Y
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 417 LISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLRE 476
LI YGR + D D M+ G P SY LI+ G +A +M
Sbjct: 465 LIGGYGRKYEF-DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 523
Query: 477 EIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEA 536
+ P + Y L+D G + K M+ + +E VT+N L+DG + G+ EA
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 537 RDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM------------------ 578
D++ E + GL+P + TYN L++ YG G + L +EM
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Query: 579 -------------ATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
+++KPD + Y+ +++ + D ++AF KQM++ D +Y
Sbjct: 644 CTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTY 703
Query: 626 EKL 628
L
Sbjct: 704 NSL 706
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 12/389 (3%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
+YN I G G A EAME ++PDH+ + +I + G + A + K
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGE-MENAEKEVNK 449
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
M KGV S E L+ + + ++ I EME G N + Y TLIN CK ++
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
L EA+ + ++M+ +G+ P +N+L+D + + E + E+ G+E N +Y
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 417 LISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLRE 476
LI K+S+ A D L + R G+KP +Y +LI Y G ++ A +E M R
Sbjct: 570 LIDGLSMTGKLSE-AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 477 EIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSE-KVEGTRVTFNILLDGFAKQGQYLE 535
IKP+++TY L+ + G +++ + + E ++ + +N +L +A G +
Sbjct: 629 GIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 536 ARDVVSEF--GKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
A ++ + IGL T TYN L+ + G+ ++ L+ EM ++P++ TY+ +
Sbjct: 684 AFNLQKQMIEKSIGLDKT--TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDV 622
+ V+D+ A+ ++++M + G + DV
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 199/436 (45%), Gaps = 18/436 (4%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
+VL L + + +D LF + + YN I G G + ++K E M+A
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
+++ P +T + ++ + K G ++A ++M G L +
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGM-VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 324 EALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM 383
AL + G+ NA + L+NA CK ++E+AE + KGL P +N ++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 384 DAYSR-------RMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFL 436
D Y R RM+ E +EK G++P+ +Y CLI + +M + A
Sbjct: 397 DGYCRKGDLVGARMKIEAMEK-------QGMKPDHLAYNCLIRRFCELGEMEN-AEKEVN 448
Query: 437 RMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSG 496
+MK G+ P+ +Y LI Y +K + + M P++ +Y L++ + G
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK-G 507
Query: 497 DTGMMMKIWKLMMSEKVEGTRV-TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTY 555
+ +I K M ++ +V +N+L+DG +G+ +A E K G++ L+TY
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 556 NMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVK 615
N L++ G+ S+ LL E++ +KPD TY+++I + + +R +++M +
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 616 SGQVPDVKSYEKLRSI 631
SG P +K+Y L S+
Sbjct: 628 SGIKPTLKTYHLLISL 643
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 164/350 (46%), Gaps = 8/350 (2%)
Query: 332 MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ 391
M+ I + +YN LI+ CK ++ +AE LF EM + L P+ T+N L+D Y +
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 392 PEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYT 451
PE K+ ++ +EP+ ++ L+ + + D A + MK +G P + +++
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED-AENVLKEMKDLGFVPDAFTFS 323
Query: 452 ALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSE 511
L YS E A +E + +K + T + LL+A + G +I M++
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 512 KVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKL 571
+ V +N ++DG+ ++G + AR + K G++P + YN L+ + G+
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 572 PQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL--- 628
+ + +M + P TY+ +I + R +F + F K+M +G +P+V SY L
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 629 ----RSILDVKVATKNRRDKSAILGIINSKMGMVKAKKKGKKDEFWKYKK 674
+L+ ++ ++ D+ + M + KGK ++ +++ K
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 160/341 (46%), Gaps = 3/341 (0%)
Query: 289 EAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLI 348
+ E F +M + S + L+ C N+A + EM + + + I YNTLI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 349 NAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLE 408
+ YCK+ E++ + + MK ++P+ TFN L+ + E E +L E++D+G
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 409 PNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYA 468
P+A +++ L Y K ++ A + G+K +++ + L++A G EKA
Sbjct: 317 PDAFTFSILFDGYSSNEK-AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 469 AFENMLREEIKPSIETYTALLDAFRRSGD-TGMMMKIWKLMMSEKVEGTRVTFNILLDGF 527
+ + + P+ Y ++D + R GD G MKI + M + ++ + +N L+ F
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI-EAMEKQGMKPDHLAYNCLIRRF 434
Query: 528 AKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDS 587
+ G+ A V++ G+ P++ TYN+L+ YGR + K +LKEM P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 588 VTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
V+Y T+I + A + M G P V+ Y L
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 6/302 (1%)
Query: 235 AHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFF 294
YN I G +D + + ME N P+ V+ +I + K G EA
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK-GSKLLEAQIVK 517
Query: 295 EKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKS 354
M +GV + L+ C +G +A EM KKGI N + YNTLI+ +
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 355 NQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSY 414
+L EAE L E+ KGLKP T+N L+ Y + L E++ G++P K+Y
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 415 TCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENML 474
LIS ++ ++ F M +KP Y ++H Y+V G EKA+ + M+
Sbjct: 638 HLLISLC--TKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 475 REEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYL 534
+ I TY +L+ + G + + M + ++E T+NI++ G + Y+
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYM 752
Query: 535 EA 536
A
Sbjct: 753 SA 754
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 143/325 (44%), Gaps = 45/325 (13%)
Query: 342 IVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLE 401
++ + L+N +S + EA LF ++ +G+ P+S + +L+D + Q + + L
Sbjct: 113 LLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 402 LQDMGLEPNAKSYTCLISAYGRPRKMSDMAA--DAFLRMKRVGIKPTSHSYTALIHAYSV 459
+ + P+ Y I A K+SD+ + F RMK I P+ Y LI
Sbjct: 170 ILESDFRPSKFMYGKAIQA---AVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK 226
Query: 460 GGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVT 519
G A F+ ML + PS+ TY L+D + ++G+ K+ + M ++ +E + +T
Sbjct: 227 GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 520 FNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNML--------------------- 558
FN LL G K G +A +V+ E +G P T+++L
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 559 -----MNAYG---------RGGQTSKLPQLL-KEMATLNIKPDSVTYSTMIYAFVRVRDF 603
MNAY + G+ K ++L +EMA + P+ V Y+TMI + R D
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNTMIDGYCRKGDL 405
Query: 604 KRAFFYHKQMVKSGQVPDVKSYEKL 628
A + M K G PD +Y L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCL 430
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D YN+ ISG + G YE M+ + ++P T ++I+ K G E
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTE--RL 655
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M+ K L V ++ + G +A +Q +M +K I + YN+LI K
Sbjct: 656 FGEMSLKPDLL---VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY 386
+L E L EM + ++P + T+NI++ +
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 745
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D VYN + G + A+ + M ++ D T + +I K G+ E
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC-EVRSL 722
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++MN + ++ + ++K C+ A + EM++KG + + N L++ +
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 354 SNQLEEAEGLFQEMKTKGL 372
+ +EAE + EM + L
Sbjct: 783 EWRSKEAEIVISEMNGRML 801
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 211/445 (47%), Gaps = 20/445 (4%)
Query: 192 LQEPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRY 251
L EP+ S + SVL +L FK+ P+S + A + GL + ++
Sbjct: 106 LIEPNFDSGQLDSVL----------SELFEPFKDKPEST----SSELLAFLKGLGFHKKF 151
Query: 252 DDAWKAYE-AMEANNVRP--DHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEV 308
D A +A++ M+ + + D+ +I+I+ + K GR + A F + G L
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA-NMFNGLQEDGFSLDVYS 210
Query: 309 VGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK-SNQLEEAEGLFQEM 367
+L+ +F + G EA+ + +ME+ G I YN ++N + K + L ++M
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 368 KTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKM 427
K+ G+ P + T+N L+ R + ++ E++ G + +Y L+ YG+ +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 428 SDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTA 487
+ A M G P+ +Y +LI AY+ G ++A M + KP + TYT
Sbjct: 331 KE-AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 488 LLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIG 547
LL F R+G M I++ M + + TFN + + +G++ E + E G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 548 LQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAF 607
L P ++T+N L+ +G+ G S++ + KEM P+ T++T+I A+ R F++A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 608 FYHKQMVKSGQVPDVKSYEKLRSIL 632
+++M+ +G PD+ +Y + + L
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAAL 534
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 195/420 (46%), Gaps = 5/420 (1%)
Query: 187 YEWMRLQEP--SLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISG 244
++W Q+ S++ +++ +LG+ +F L + D + Y + IS
Sbjct: 158 FDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISA 217
Query: 245 LFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKL 304
GRY +A ++ ME + +P +T ++++ K G + EKM G+
Sbjct: 218 FANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP 277
Query: 305 SQEVVGALMKSFCDEG-LKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGL 363
L+ + C G L EA + EM+ G + + YN L++ Y KS++ +EA +
Sbjct: 278 DAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 364 FQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGR 423
EM G P+ T+N L+ AY+R + +L ++ + G +P+ +YT L+S + R
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 424 PRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIE 483
K+ + A F M+ G KP ++ A I Y G + F+ + + P I
Sbjct: 397 AGKV-ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 484 TYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEF 543
T+ LL F ++G + ++K M R TFN L+ +++ G + +A V
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 544 GKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDF 603
G+ P L TYN ++ A RGG + ++L EM KP+ +TY ++++A+ ++
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 228/537 (42%), Gaps = 100/537 (18%)
Query: 165 RECVQLLELMANDGLLGCCLYFYEWMRLQEPSLVSPRACSVLFPVLGRARMG---DDLMV 221
RE V + + M DG +P+L++ +V+ V G+ MG + +
Sbjct: 225 REAVNVFKKMEEDGC--------------KPTLIT---YNVILNVFGK--MGTPWNKITS 265
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMR 281
L + + DA+ YN I+ + +A + +E M+A D VT + ++
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 282 KNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNA 341
K+ R KEA + +M G S +L+ ++ +G+ +EA+ ++ +M +KG +
Sbjct: 326 KSHR-PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 342 IVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLE 401
Y TL++ + ++ ++E A +F+EM+ G KP TFN + Y R + + K+ E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 402 LQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGG 461
+ GL P+ ++ L++ +G+ M + F MKR G P ++ LI AYS G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQ-NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 462 WHEKAYAAFENMLREEIKPSIETYT----------------------------------- 486
E+A + ML + P + TY
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 487 ALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRV---------------------------- 518
+LL A+ + G+M + + + S +E V
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 519 -------TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKL 571
T N ++ + ++ +A V+ + G P++ TYN LM + R K
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 572 PQLLKEMATLNIKPDSVTYSTMIYAF---VRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
++L+E+ IKPD ++Y+T+IYA+ R+RD R F +M SG VPDV +Y
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF---SEMRNSGIVPDVITY 737
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 192/447 (42%), Gaps = 41/447 (9%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
YN+ IS G D+A + M +PD T + +++ + G+ + A FE+
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK-VESAMSIFEE 409
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
M G K + A +K + + G E + I E+ G+ + + +NTL+ + ++
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
E G+F+EMK G P TFN L+ AYSR E + + D G+ P+ +Y
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 417 LISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYS----VGGWH---EKAYA- 468
+++A R M + + M+ KP +Y +L+HAY+ +G H E+ Y+
Sbjct: 530 VLAALARG-GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 469 ---------------------------AFENMLREEIKPSIETYTALLDAFRRSGDTGMM 501
AF + P I T +++ + R
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 502 MKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNA 561
+ M + T+N L+ ++ + ++ +++ E G++P +++YN ++ A
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 562 YGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPD 621
Y R + ++ EM I PD +TY+T I ++ F+ A + M+K G P+
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Query: 622 VKSYEKLRSILDVKVATKNRRDKSAIL 648
+Y SI+D NR+D++ +
Sbjct: 769 QNTYN---SIVD-GYCKLNRKDEAKLF 791
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 190/442 (42%), Gaps = 42/442 (9%)
Query: 195 PSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDA 254
PS+V+ + L R M D+ M L + + D Y +SG G+ + A
Sbjct: 347 PSIVTYNS---LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 255 WKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV--GAL 312
+E M +P+ T + I G+ E + F+++N G LS ++V L
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT-EMMKIFDEINVCG--LSPDIVTWNTL 460
Query: 313 MKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGL 372
+ F G+ +E + EM++ G +NTLI+AY + E+A +++ M G+
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 373 KPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDM-- 430
P +T+N ++ A +R E EK+L E++D +PN +Y L+ AY +++ M
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 431 --------------------------------AADAFLRMKRVGIKPTSHSYTALIHAYS 458
A AF +K G P + +++ Y
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 459 VGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRV 518
KA + M PS+ TY +L+ RS D G +I + ++++ ++ +
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 519 TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
++N ++ + + + +A + SE G+ P ++TYN + +Y + +++ M
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 579 ATLNIKPDSVTYSTMIYAFVRV 600
+P+ TY++++ + ++
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKL 782
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 188/395 (47%), Gaps = 2/395 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D +N I GLF G+ +A + M N +PD VT + ++ + ++G ++ A +
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL-ALDL 215
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
KM + VK ++ S C +G + A+ + EME KGI S+ + YN+L+ CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ + + L ++M ++ + P TFN+L+D + + + + +L E+ G+ PN +
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y L+ Y ++S+ A + M R P ++T+LI Y + + F N+
Sbjct: 336 YNTLMDGYCMQNRLSE-ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + + TY+ L+ F +SG + ++++ M+S V +T+ ILLDG G+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+A ++ + K + ++ Y ++ +GG+ L + +KP+ +TY+ M
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
I + A ++M + G P+ +Y L
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 192/399 (48%), Gaps = 2/399 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D YN+ ++G+ G A ME NV+ D T S +I ++ ++G A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG-CIDAAISL 250
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F++M KG+K S +L++ C G N+ ++ +M + I N I +N L++ + K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L+EA L++EM T+G+ P T+N LMD Y + + +L + P+ +
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
+T LI Y +++ D F + + G+ + +Y+ L+ + G + A F+ M
Sbjct: 371 FTSLIKGYCMVKRVDD-GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + P + TY LLD +G ++I++ + K++ V + +++G K G+
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+A ++ G++P +MTY ++++ + G S+ LL++M P+ TY+T+
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
I A +R D + ++M G D S + + +L
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 5/300 (1%)
Query: 331 EMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRM 390
++E GI N N +IN +C+ + A + ++ G +P + TFN L+ +
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF--L 170
Query: 391 QPEIVEKLLL--ELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSH 448
+ ++ E ++L + + G +P+ +Y +++ R S +A D +M+ +K
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS-LALDLLRKMEERNVKADVF 229
Query: 449 SYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLM 508
+Y+ +I + G + A + F+ M + IK S+ TY +L+ ++G + K M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 509 MSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQT 568
+S ++ +TFN+LLD F K+G+ EA ++ E G+ P ++TYN LM+ Y +
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 569 SKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
S+ +L M PD VT++++I + V+ + + K G V + +Y L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 171/395 (43%), Gaps = 45/395 (11%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHV-YNAAISGLFWCGRYDDAWKAYEAME 262
S + L R D + LFK + ++K + + V YN+ + GL G+++D + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 263 ANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLK 322
+ + P+ +T ++++ K G+ +EA E +++M +G
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGK-LQEANELYKEMITRG--------------------- 328
Query: 323 NEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNIL 382
I N I YNTL++ YC N+L EA + M P TF L
Sbjct: 329 --------------ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 383 MDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVG 442
+ Y + + K+ + GL NA +Y+ L+ + + K+ +A + F M G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK-LAEELFQEMVSHG 433
Query: 443 IKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMM 502
+ P +Y L+ G EKA FE++ + ++ I YT +++ + G
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE--- 490
Query: 503 KIWKLMMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLM 559
W L S +G + +T+ +++ G K+G EA ++ + + G P TYN L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 560 NAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMI 594
A+ R G + +L++EM + D+ + +I
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 173/375 (46%), Gaps = 4/375 (1%)
Query: 252 DDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGA 311
DDA ++ M + P V S +A+ + + +F +++ G+ + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIART-KQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 312 LMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKG 371
++ FC A + ++ K G + +NTLI ++ EA L M G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 372 LKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMA 431
+P T+N +++ R + LL ++++ ++ + +Y+ +I + R + D A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI-DAA 247
Query: 432 ADAFLRMKRVGIKPTSHSYTALIHAYS-VGGWHEKAYAAFENMLREEIKPSIETYTALLD 490
F M+ GIK + +Y +L+ G W++ A ++M+ EI P++ T+ LLD
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL-LKDMVSREIVPNVITFNVLLD 306
Query: 491 AFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQP 550
F + G +++K M++ + +T+N L+DG+ Q + EA +++ + P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 551 TLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYH 610
++T+ L+ Y + ++ + ++ + ++VTYS ++ F + K A
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 611 KQMVKSGQVPDVKSY 625
++MV G +PDV +Y
Sbjct: 427 QEMVSHGVLPDVMTY 441
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 210/448 (46%), Gaps = 1/448 (0%)
Query: 184 LYFYEWMRLQEPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAIS 243
L +++M+ Q + +++ +LGR + D + +F +P R Y A I+
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 244 GLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVK 303
GRY+ + + + M+ + P +T + +I A + G + F +M +G++
Sbjct: 185 AYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Query: 304 LSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGL 363
L+ + GL +EA ++ M GI + Y+ L+ + K +LE+ L
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 364 FQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGR 423
EM + G P ++N+L++AY++ + + ++Q G PNA +Y+ L++ +G+
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 424 PRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIE 483
+ D+ FL MK P + +Y LI + GG+ ++ F +M+ E I+P +E
Sbjct: 365 SGRYDDV-RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 484 TYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEF 543
TY ++ A + G KI + M + + + + +++ F + Y EA +
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 544 GKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDF 603
++G P++ T++ L+ ++ RGG + +L + I + T++ I A+ + F
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 604 KRAFFYHKQMVKSGQVPDVKSYEKLRSI 631
+ A + M KS PD ++ E + S+
Sbjct: 544 EEAVKTYVDMEKSRCDPDERTLEAVLSV 571
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 169/394 (42%), Gaps = 3/394 (0%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
+VL ++ + M +F + + +A+ Y+ ++ GRYDD + + M++
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS 380
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
+N PD T +I+I + G KE F M + ++ E ++ + GL
Sbjct: 381 SNTDPDAATYNILIEVFGEGGY-FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 324 EALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM 383
+A I M I ++ Y +I A+ ++ EEA F M G P+ TF+ L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 384 DAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGI 443
+++R + E +L L D G+ N ++ I AY + K + A ++ M++
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEE-AVKTYVDMEKSRC 558
Query: 444 KPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMK 503
P + A++ YS ++ FE M +I PSI Y +L + ++ + +
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNE 618
Query: 504 IWKLMMSEKVEGTRVTFNILLDG-FAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAY 562
+ + M+S +V ++ G + + V+ + G + YN L++A
Sbjct: 619 LLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDAL 678
Query: 563 GRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA 596
GQ + ++L E + P+ + ++++
Sbjct: 679 WWLGQKERAARVLNEATKRGLFPELFRKNKLVWS 712
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 2/369 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y A I+GL G D A ME + D V S +I ++ K R +A
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY-RHVDDALNL 262
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M+ KG++ +L+ C+ G ++A + +M ++ I N + +N+LI+A+ K
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L EAE LF EM + + P T+N L++ + + + +++ + P+ +
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y LI+ + + +K+ D + F M R G+ + +YT LIH + + A F+ M
Sbjct: 383 YNTLINGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + + P+I TY LLD ++G M +++ + K+E T+NI+ +G K G+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+ D+ G++P ++ YN +++ + + G + L +M PDS TY+T+
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 594 IYAFVRVRD 602
I A +R D
Sbjct: 562 IRAHLRDGD 570
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 200/412 (48%), Gaps = 2/412 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
D+ + LF + +S+ F ++ +S + ++D E ME V + T +IM
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + + + A KM + G S + +L+ FC +EA+ + +M + G
Sbjct: 107 INCLCRRSQLSF-ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ + + TL++ + N+ EA L + M KG +P T+ +++ +R +P++
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ +E + Y+ +I + + R + D A + F M GI+P +Y++LI
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD-ALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
G A +ML +I P++ T+ +L+DAF + G K++ M+ ++
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
VT+N L++GF + EA+ + + P ++TYN L+N + + + +L +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+M+ + ++VTY+T+I+ F + D A KQMV G P++ +Y L
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 172/391 (43%), Gaps = 43/391 (10%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
S + L + R DD + LF + D Y++ IS L GR+ DA + M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
+ P+ VT + +I A K G+ EA + F++M
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLI-EAEKLFDEM-------------------------- 336
Query: 324 EALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM 383
IQ + I N + YN+LIN +C ++L+EA+ +F M +K P T+N L+
Sbjct: 337 ----IQ-----RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 384 DAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGI 443
+ + + + +L ++ GL N +YT LI + + D A F +M G+
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD-CDNAQMVFKQMVSDGV 446
Query: 444 KPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMK 503
P +Y L+ G EKA FE + + +++P I TY + + ++G +
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK---VED 503
Query: 504 IWKLMMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMN 560
W L S ++G + + +N ++ GF K+G EA + + + G P TYN L+
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 561 AYGRGGQTSKLPQLLKEMATLNIKPDSVTYS 591
A+ R G + +L+KEM + D+ TY
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYG 594
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 1/224 (0%)
Query: 409 PNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYA 468
P+ ++ L+SA + +K D+ +M+ +G+ ++Y +I+ A A
Sbjct: 63 PSIVEFSKLLSAIAKMKKF-DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 469 AFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFA 528
M++ PSI T +LL+ F + + M+ + VTF L+ G
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 529 KQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSV 588
+ + EA +V G QP L+TY ++N + G+ LL +M I+ D V
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 589 TYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
YST+I + + R A +M G PDV +Y L S L
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 199/429 (46%), Gaps = 11/429 (2%)
Query: 203 CSVL---FPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYE 259
C+ L F LG+ R ++ + L S D YN ISG G ++A +
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNALSVLD 196
Query: 260 AMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDE 319
M +V PD VT + ++ ++ +G+ K+A E ++M ++ L+++ C +
Sbjct: 197 RM---SVSPDVVTYNTILRSLCDSGK-LKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 320 GLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATF 379
A+ + EM +G + + YN L+N CK +L+EA +M + G +P T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 380 NILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMK 439
NI++ + + EKLL ++ G P+ ++ LI+ R + + A D +M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR-KGLLGRAIDILEKMP 371
Query: 440 RVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTG 499
+ G +P S SY L+H + ++A E M+ P I TY +L A + G
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 500 MMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLM 559
++I + S+ +T+N ++DG AK G+ +A ++ E L+P +TY+ L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 560 NAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQV 619
R G+ + + E + I+P++VT+++++ + R RA + M+ G
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 620 PDVKSYEKL 628
P+ SY L
Sbjct: 552 PNETSYTIL 560
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 168/361 (46%), Gaps = 2/361 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D YN + L G+ A + + M + PD +T +I+I A ++ A +
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS-GVGHAMKL 261
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++M +G L+ C EG +EA+ +M G N I +N ++ + C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ + +AE L +M KG P+ TFNIL++ R+ +L ++ G +PN+ S
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y L+ + + +KM D A + RM G P +Y ++ A G E A +
Sbjct: 382 YNPLLHGFCKEKKM-DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ P + TY ++D ++G TG +K+ M ++ ++ +T++ L+ G +++G+
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
EA EF ++G++P +T+N +M + QT + L M KP+ +Y+ +
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 594 I 594
I
Sbjct: 561 I 561
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 193/424 (45%), Gaps = 25/424 (5%)
Query: 220 MVLFKNLPQSKEFRDAHVYNAAISGLFWC----------GRYDDAWKAYEAMEANNVRPD 269
MV L + +F + VY+ + + C G+ A K E +E + PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 270 HVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV--GALMKSFCDEGLKNEALI 327
+T ++MI+ K G A ++M+ +S +VV +++S CD G +A+
Sbjct: 172 VITYNVMISGYCKAGE-INNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 328 IQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYS 387
+ M ++ + I Y LI A C+ + + A L EM+ +G P T+N+L++
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 388 RRMQPEIVEKLLLELQDMGLEPNAKSYTCLI---SAYGRPRKMSDMAADAFLRMKRVGIK 444
+ + + K L ++ G +PN ++ ++ + GR + AD M R G
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD----MLRKGFS 341
Query: 445 PTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKI 504
P+ ++ LI+ G +A E M + +P+ +Y LL F + ++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 505 WKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGR 564
+ M+S VT+N +L K G+ +A +++++ G P L+TYN +++ +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 565 GGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKS 624
G+T K +LL EM ++KPD++TYS+++ R A + + + G P+ +
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 625 YEKL 628
+ +
Sbjct: 522 FNSI 525
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 153/341 (44%), Gaps = 24/341 (7%)
Query: 340 NAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLL 399
+ I TLI +C+ + +A + + ++ G P T+N+++ Y + + + L
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE---INNAL 192
Query: 400 LELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSV 459
L M + P+ +Y ++ + K+ A + RM + P +YT LI A
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQ-AMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 460 GGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVT 519
A + M P + TY L++ + G +K M S + +T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 520 FNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMA 579
NI+L G++++A ++++ + G P+++T+N+L+N R G + +L++M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 580 TLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL--DVKVA 637
+P+S++Y+ +++ F + + RA Y ++MV G PD+ +Y + + L D KV
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV- 430
Query: 638 TKNRRDKSAILGIINSKM-------------GMVKAKKKGK 665
D IL ++SK G+ KA K GK
Sbjct: 431 ----EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 232 FRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAW 291
+ D YN ++ L G+ +DA + + + P +T + +I + K G++ K A
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK-AI 469
Query: 292 EFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAY 351
+ ++M K +K +L+ EG +EA+ E E+ GI NA+ +N+++
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 352 CKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGL 407
CKS Q + A M +G KP ++ IL++ + + +LL EL + GL
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
YN I GL G+ A K + M A +++PD +T S ++ + + G+ EA +FF +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK-VDEAIKFFHEF 510
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
R G++ + ++M C + A+ + M +G N Y LI
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 358 EEAEGLFQEMKTKGL-KPTSA 377
+EA L E+ KGL K +SA
Sbjct: 571 KEALELLNELCNKGLMKKSSA 591
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 199/423 (47%), Gaps = 7/423 (1%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
+ L L R + D++ ++ + + K + + YN ++G G ++A + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 264 NNVRPDHVTCS--IMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGL 321
+ PD T + IM RK+ S A++ F +M KG + ++ L+ C
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDS---AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 322 KNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNI 381
+EA+ + ++M+ Y LI + C S + EA L +EM+ G+KP T+ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 382 LMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRV 441
L+D+ + + E +LL ++ + GL PN +Y LI+ Y + R M + A D M+
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK-RGMIEDAVDVVELMESR 422
Query: 442 GIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMM 501
+ P + +Y LI Y H KA ML ++ P + TY +L+D RSG+
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 502 MKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNA 561
++ LM + + T+ ++D K + EA D+ + G+ P ++ Y L++
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 562 YGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPD 621
Y + G+ + +L++M + N P+S+T++ +I+ K A ++MVK G P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 622 VKS 624
V +
Sbjct: 602 VST 604
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 195/412 (47%), Gaps = 3/412 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
D +F +P R+ Y I GL R D+A + M+ + P T +++
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I ++ + R + EA ++M G+K + L+ S C + +A + +M +KG
Sbjct: 330 IKSLCGSERKS-EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ N I YN LIN YCK +E+A + + M+++ L P + T+N L+ Y + + +
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM- 447
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
+L ++ + + P+ +Y LI R D A M G+ P +YT++I +
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNF-DSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
E+A F+++ ++ + P++ YTAL+D + ++G + + M+S+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
+TFN L+ G G+ EA + + KIGLQPT+ T +L++ + G +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+M + KPD+ TY+T I + R A +M ++G PD+ +Y L
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 207/472 (43%), Gaps = 56/472 (11%)
Query: 210 LGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPD 269
L AR D+ M LF + + F Y I L R +A + ME ++P+
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 270 HVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQ 329
T +++I ++ + K A E +M KG+ + AL+ +C G+ +A+ +
Sbjct: 358 IHTYTVLIDSLCSQCKFEK-ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 330 MEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRR 389
ME + + N YN LI YCKSN + +A G+ +M + + P T+N L+D R
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 390 MQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPT--- 446
+ +LL + D GL P+ +YT +I + + +++ + A D F +++ G+ P
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE-ACDLFDSLEQKGVNPNVVM 534
Query: 447 --------------------------------SHSYTALIHAYSVGGWHEKAYAAFENML 474
S ++ ALIH G ++A E M+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 475 REEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYL 534
+ ++P++ T T L+ + GD ++ M+S + T+ + + ++G+ L
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 535 EARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMI 594
+A D++++ + G+ P L TY+ L+ YG GQT+ +LK M +P T+ ++I
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 595 YAFVRVR------------------DFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ ++ +F ++MV+ P+ KSYEKL
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 158/316 (50%), Gaps = 6/316 (1%)
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLEL 402
YNTL+N+ + ++E + ++ EM + P T+N +++ Y + E + + ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 403 QDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGW 462
+ GL+P+ +YT LI Y + RK D A F M G + +YT LIH V
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQ-RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 463 HEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNI 522
++A F M +E P++ TYT L+ + S + + K M ++ T+ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 523 LLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLN 582
L+D Q ++ +AR+++ + + GL P ++TYN L+N Y + G +++ M +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 583 IKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRR 642
+ P++ TY+ +I + + + +A +M++ +PDV +Y S++D + + N
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTY---NSLIDGQCRSGNFD 479
Query: 643 DKSAILGIINSKMGMV 658
+L ++N + G+V
Sbjct: 480 SAYRLLSLMNDR-GLV 494
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 156/393 (39%), Gaps = 54/393 (13%)
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMR 281
LF +L Q + +Y A I G G+ D+A E M + N P+ +T + +I +
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 282 KNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNA 341
+G+ KEA EKM + G++ + L+ +G + A +M G +A
Sbjct: 579 ADGK-LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 342 IVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLE 401
Y T I YC+ +L +AE + +M+ G+ P T++ L+ Y Q +L
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 402 LQDMGLEPNAKSYTCLIS-----AYGRPR-------KMSDM-----AADAFLRMKRVGIK 444
++D G EP+ ++ LI YG+ + MS+M + +M +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 445 PTSHSYTALIHAYSVGGWHEKAYAAFENMLREE-IKPSIETYTALLDAFRRSGDTGMMMK 503
P + SY LI G A F++M R E I PS + ALL + K
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 504 IWKLMMS---------------------EKVEGTRVTFN--------------ILLDGFA 528
+ M+ EK GT V N I++DG
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 529 KQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNA 561
KQG ++ + K G + + TY++L+
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 482 IETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVS 541
I Y LL++ R G M +++ M+ +KV T+N +++G+ K G EA VS
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 542 EFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVR 601
+ + GL P TY L+ Y + ++ EM + + V Y+ +I+ R
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 602 DFKRAFFYHKQMVKSGQVPDVKSYEKL 628
A +M P V++Y L
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVL 329
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 198/412 (48%), Gaps = 2/412 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF ++ +S+ F ++ +S + ++D E M+ + + T SI+
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + + A KM + G + + +L+ FC ++A+ + +M + G
Sbjct: 123 INCFCRRSQLSL-ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
++ +NTLI+ + N+ EA L M KG +P T+ I+++ +R ++
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ +EP Y +I A + ++D A + F M GI+P +Y +LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND-ALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
G A +M+ +I P++ T++AL+DAF + G K++ M+ ++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
T++ L++GF + EA+ + P ++TYN L+ + + + + +L +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
EM+ + ++VTY+T+I+ F + R+ A KQMV G +PD+ +Y L
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 182/369 (49%), Gaps = 2/369 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y ++GL G D A + ME + P V + +I A+ N ++ +A
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL-CNYKNVNDALNL 278
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M+ KG++ + +L++ C+ G ++A + +M ++ I N + ++ LI+A+ K
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L EAE L+ EM + + P T++ L++ + + + + + + PN +
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y LI + + +++ D + F M + G+ + +YT LIH + + A F+ M
Sbjct: 399 YNTLIKGFCKAKRV-DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + + P I TY+ LLD +G + +++ + K+E T+NI+++G K G+
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+ D+ G++P ++TY +M+ + R G + L +EM PDS TY+T+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 594 IYAFVRVRD 602
I A +R D
Sbjct: 578 IRAHLRDGD 586
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 2/395 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D+ +N I GLF R +A + M +PD VT I++ + K G A
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG-DIDLALSL 243
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
+KM + ++ + ++ + C+ N+AL + EM+ KGI N + YN+LI C
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ +A L +M + + P TF+ L+DA+ + + EKL E+ ++P+ +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y+ LI+ + ++ D A F M P +Y LI + ++ F M
Sbjct: 364 YSSLINGFCMHDRL-DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + + TYT L+ F ++ + ++K M+S+ V +T++ILLDG G+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
A V + ++P + TYN+++ + G+ L ++ +KP+ VTY+TM
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ F R + A ++M + G +PD +Y L
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 195/419 (46%), Gaps = 3/419 (0%)
Query: 212 RARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHV 271
R+++ L VL K + E D N+ ++G R DA M +PD
Sbjct: 129 RSQLSLALAVLAKMMKLGYE-PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 272 TCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQME 331
T + +I + ++ R A EA ++M KG + G ++ C G + AL + +
Sbjct: 188 TFNTLIHGLFRHNR-ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 332 MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ 391
ME+ I ++YNT+I+A C + +A LF EM KG++P T+N L+ +
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 392 PEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYT 451
+LL ++ + + PN +++ LI A+ + K+ + A + M + I P +Y+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDEMIKRSIDPDIFTYS 365
Query: 452 ALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSE 511
+LI+ + + ++A FE M+ ++ P++ TY L+ F ++ M++++ M
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 512 KVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKL 571
+ G VT+ L+ GF + + A+ V + G+ P +MTY++L++ G+
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 572 PQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
+ + + ++PD TY+ MI + + + + G P+V +Y + S
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 10/386 (2%)
Query: 209 VLGRARMGD-DL-MVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNV 266
V G + GD DL + L K + Q K +YN I L +DA + M+ +
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 267 RPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL 326
RP+ VT + +I + GR + +A M + + + AL+ +F EG EA
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWS-DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 327 IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY 386
+ EM K+ I + Y++LIN +C ++L+EA+ +F+ M +K P T+N L+ +
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 387 SRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPT 446
+ + + +L E+ GL N +YT LI + + R+ D A F +M G+ P
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE-CDNAQIVFKQMVSDGVLPD 465
Query: 447 SHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWK 506
+Y+ L+ G E A FE + R +++P I TY +++ ++G + W
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK---VEDGWD 522
Query: 507 LMMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYG 563
L S ++G + VT+ ++ GF ++G EA + E + G P TYN L+ A+
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 564 RGGQTSKLPQLLKEMATLNIKPDSVT 589
R G + +L++EM + D+ T
Sbjct: 583 RDGDKAASAELIREMRSCRFVGDAST 608
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 6/309 (1%)
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMR 281
L ++ + K + ++A I G+ +A K Y+ M ++ PD T S +I
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 282 KNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNA 341
+ R EA FE M K + L+K FC +E + + EM ++G+ N
Sbjct: 373 MHDR-LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 342 IVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLE 401
+ Y TLI+ + ++ + + A+ +F++M + G+ P T++IL+D + E +
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 402 LQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGG 461
LQ +EP+ +Y +I + K+ D D F + G+KP +YT ++ + G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVED-GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 462 WHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTF- 520
E+A A F M E P TY L+ A R GD ++ + M S + G T
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 610
Query: 521 ---NILLDG 526
N+L DG
Sbjct: 611 LVTNMLHDG 619
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
Query: 429 DMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTAL 488
D A + F M + P+ ++ L+ A + + + E M I ++ TY+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 489 LDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGL 548
++ F R + + + MM E VT N LL+GF + +A +V + ++G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 549 QPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFF 608
QP T+N L++ R + S+ L+ M +PD VTY ++ + D A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 609 YHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRRD 643
K+M + P V Y +I+D KN D
Sbjct: 243 LLKKMEQGKIEPGVVIYN---TIIDALCNYKNVND 274
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 183/391 (46%), Gaps = 2/391 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
+N I GLF + +A + M A +PD VT +++ + K G + A+ KM
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DLAFNLLNKM 247
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
+ ++ + ++ C ++AL + EME KGI N + Y++LI+ C +
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
+A L +M + + P TF+ L+DA+ + + EKL E+ ++P+ +Y+ L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I+ + ++ D A F M P +Y LI + E+ F M +
Sbjct: 368 INGFCMHDRL-DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
+ + TY L+ ++GD M +I+K M+S+ V +T+N LLDG K G+ +A
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
V + ++PT+ TYN+++ + G+ L ++ +KPD V Y+TMI F
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 598 VRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
R + A K+M + G +P+ Y L
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 10/386 (2%)
Query: 209 VLGRARMGD-DLMV-LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNV 266
V G + GD DL L + Q K +YN I GL DDA ++ ME +
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 267 RPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL 326
RP+ VT S +I+ + GR + +A M + + AL+ +F EG EA
Sbjct: 288 RPNVVTYSSLISCLCNYGRWS-DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 327 IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY 386
+ EM K+ I + + Y++LIN +C ++L+EA+ +F+ M +K P T+N L+ +
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 387 SRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPT 446
+ + E ++ E+ GL N +Y LI + DMA + F M G+ P
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD-CDMAQEIFKEMVSDGVPPN 465
Query: 447 SHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWK 506
+Y L+ G EKA FE + R +++P+I TY +++ ++G + W
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK---VEDGWD 522
Query: 507 LMMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYG 563
L + ++G + V +N ++ GF ++G EA + E + G P YN L+ A
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 564 RGGQTSKLPQLLKEMATLNIKPDSVT 589
R G +L+KEM + D+ T
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDAST 608
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 193/412 (46%), Gaps = 2/412 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF + +S+ F ++ +S + ++D E M+ + +H T SI+
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + A KM + G + + + +L+ +C +EA+ + +M G
Sbjct: 123 INCFCRRSQ-LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
N + +NTLI+ N+ EA L M KG +P T+ ++++ +R ++
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ LEP Y +I + + M D A + F M+ GI+P +Y++LI
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD-ALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
G A +M+ +I P + T++AL+DAF + G K++ M+ ++ +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
VT++ L++GF + EA+ + P ++TYN L+ + + + + ++ +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
EM+ + ++VTY+ +I + D A K+MV G P++ +Y L
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 174/363 (47%), Gaps = 16/363 (4%)
Query: 266 VRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEA 325
VR + T S + + S K ++++ EK++R G+ E ++A
Sbjct: 21 VRGNAATVSPSFSFFWRRAFSGKTSYDYREKLSRNGLS---------------ELKLDDA 65
Query: 326 LIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDA 385
+ + EM K + I ++ L++A K N+ + L ++M+ G+ T++IL++
Sbjct: 66 VALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINC 125
Query: 386 YSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKP 445
+ RR Q + +L ++ +G EPN + + L++ Y +++S+ A +M G +P
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA-LVDQMFVTGYQP 184
Query: 446 TSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIW 505
+ ++ LIH + +A A + M+ + +P + TY +++ + GDT + +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 506 KLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRG 565
M K+E + +N ++DG K +A ++ E G++P ++TY+ L++
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 566 GQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
G+ S +LL +M I PD T+S +I AFV+ A + +MVK P + +Y
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 626 EKL 628
L
Sbjct: 365 SSL 367
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 409 PNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYA 468
P+ ++ L+SA + K D+ +M+ +GI ++Y+ LI+ + A A
Sbjct: 79 PSIIEFSKLLSAIAKMNKF-DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 469 AFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFA 528
M++ +P+I T ++LL+ + S + + M + VTFN L+ G
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 529 KQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSV 588
+ EA ++ G QP L+TY +++N + G T LL +M ++P +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 589 TYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
Y+T+I + + A K+M G P+V +Y L S L
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMR 281
+FK + + YN + GL G+ + A +E ++ + + P T +IMI M
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 282 KNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNA 341
K G+ ++ W+ F ++ KGVK ++ FC +G K EA + EM++ G N+
Sbjct: 513 KAGK-VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 342 IVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMD 384
YNTLI A + E + L +EM++ G ++T ++ +
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 177/377 (46%), Gaps = 1/377 (0%)
Query: 254 AWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALM 313
A Y+ M + V PD TCSI++ A ++G K E + G++L+ +L+
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 314 KSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLK 373
+ G + M ++G+ N + Y +LI YCK +EEAE +F+ +K K L
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 374 PTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAAD 433
+ +LMD Y R Q ++ + ++G+ N LI+ Y + ++ + A
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE-AEQ 387
Query: 434 AFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFR 493
F RM +KP H+Y L+ Y G+ ++A + M ++E+ P++ TY LL +
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 494 RSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLM 553
R G ++ +WK+M+ V ++ + LL+ K G + EA + GL +
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
Query: 554 TYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQM 613
T N++++ + + ++ ++L + KP TY + + + +V + K AF + M
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 614 VKSGQVPDVKSYEKLRS 630
+ G P ++ Y L S
Sbjct: 568 ERKGIFPTIEMYNTLIS 584
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 186/436 (42%), Gaps = 45/436 (10%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D H YN + G G D+A K + M V P +T +I++ + G + +
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG-AFHDVLSL 458
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++ M ++GV + L+++ G NEA+ + + +G+ ++ I N +I+ CK
Sbjct: 459 WKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSR--RMQPEIVEKLLLELQDMGLEPNA 411
++ EA+ + + KP T+ L Y + ++ K +E + G+ P
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK--GIFPTI 576
Query: 412 KSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFE 471
+ Y LIS + R ++ +A D + ++ G+ PT +Y ALI + G +KAYA
Sbjct: 577 EMYNTLISGAFKYRHLNKVA-DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCF 635
Query: 472 NMLREEIKPSIETYTALLDAFRRSGDTG----MMMKI--WKLMM---------------- 509
M+ + I ++ + + ++ R ++ KI + L++
Sbjct: 636 EMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATT 695
Query: 510 -------SEKVEGT---------RVTFNILLDGFAKQGQYLEARDVVSEF-GKIGLQPTL 552
+E VE + + +N+ + G K G+ +AR + S+ P
Sbjct: 696 CLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDE 755
Query: 553 MTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQ 612
TY +L++ G +K L EMA I P+ VTY+ +I ++ + RA +
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHK 815
Query: 613 MVKSGQVPDVKSYEKL 628
+ + G P+ +Y L
Sbjct: 816 LPQKGITPNAITYNTL 831
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 190/418 (45%), Gaps = 14/418 (3%)
Query: 211 GRARMG--DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRP 268
G +R+G D++ L+K + + D + + LF G +++A K +E + A +
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 269 DHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALII 328
D +T ++MI+ + K + EA E + +N K + + AL + G EA +
Sbjct: 505 DTITLNVMISGLCKMEK-VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 329 QMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSR 388
+ ME+KGI +YNTLI+ K L + L E++ +GL PT AT+ L+ +
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 389 RMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVG----IK 444
+ E+ + G+ N + + ++ R K+ + A L ++++ +
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDE----ACLLLQKIVDFDLLL 679
Query: 445 PTSHSYTALIHAYSVGGWHEKAYA-AFENML-REEIKPSIETYTALLDAFRRSGDTGMMM 502
P S + A + + A + EN ++ + P+ Y + ++G
Sbjct: 680 PGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 739
Query: 503 KIWK-LMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNA 561
K++ L+ S++ T+ IL+ G A G +A + E G+ P ++TYN L+
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKG 799
Query: 562 YGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQV 619
+ G + +LL ++ I P+++TY+T+I V+ + A ++M++ G V
Sbjct: 800 LCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 4/324 (1%)
Query: 300 KGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG-IPSNAIVYNTLINAYCKSNQLE 358
K S V ++K + ++GL AL + M G IPS + L N K
Sbjct: 149 KEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFV 208
Query: 359 EAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQD-MGLEPNAKSYTCL 417
A ++ +M + + P T +I+++AY R + E + +GLE N +Y L
Sbjct: 209 -ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSL 267
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I+ Y + M L +R G+ +YT+LI Y G E+A FE + ++
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSER-GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
+ Y L+D + R+G +++ M+ V N L++G+ K GQ +EA
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
+ S L+P TYN L++ Y R G + +L +M + P +TY+ ++ +
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 598 VRVRDFKRAFFYHKQMVKSGQVPD 621
R+ F K M+K G D
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNAD 470
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 130/286 (45%)
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLEL 402
V++ ++ Y + ++ A +F M G P+ + N L+ R+ + + + ++
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 403 QDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGW 462
+ P+ + + +++AY R + A +G++ +Y +LI+ Y++ G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 463 HEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNI 522
E M + ++ TYT+L+ + + G +++L+ +K+ + + +
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 523 LLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLN 582
L+DG+ + GQ +A V +IG++ N L+N Y + GQ + Q+ M +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 583 IKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+KPD TY+T++ + R A QM + VP V +Y L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 182/391 (46%), Gaps = 2/391 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
+N I GLF + +A + M A +PD T ++ + K G A +KM
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG-DIDLALSLLKKM 246
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
+ ++ + ++ + C+ N+AL + EM+ KGI N + YN+LI C +
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
+A L +M + + P TF+ L+DA+ + + EKL E+ ++P+ +Y+ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I+ + ++ D A F M P +Y LI + E+ F M +
Sbjct: 367 INGFCMHDRL-DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
+ + TY L+ ++GD M KI+K M+S+ V +T++ILLDG K G+ +A
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
V K ++P + TYN+++ + G+ L ++ +KP+ + Y+TMI F
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 598 VRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
R + A ++M + G +P+ +Y L
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 191/399 (47%), Gaps = 2/399 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y ++GL G D A + ME + D V + +I A+ N ++ +A
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL-CNYKNVNDALNL 277
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M+ KG++ + +L++ C+ G ++A + +M ++ I N + ++ LI+A+ K
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L EAE L+ EM + + P T++ L++ + + + + + + PN +
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y LI + + +++ + + F M + G+ + +Y LI G + A F+ M
Sbjct: 398 YNTLIKGFCKAKRVEE-GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + + P I TY+ LLD + G + +++ + K+E T+NI+++G K G+
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+ D+ G++P ++ Y +++ + R G + L +EM P+S TY+T+
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
I A +R D + K+M G V D + + ++L
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 188/412 (45%), Gaps = 2/412 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF + QS+ +N +S + ++D E M+ + D + +I+
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + A KM + G + + +L+ +C +EA+ + +M
Sbjct: 122 INCFCRRSQ-LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
N + +NTLI+ N+ EA L M +G +P T+ +++ +R ++
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ +E + YT +I A + ++D A + F M GI+P +Y +LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVND-ALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
G A +M+ +I P++ T++AL+DAF + G K++ M+ ++
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
T++ L++GF + EA+ + P ++TYN L+ + + + + +L +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
EM+ + ++VTY+T+I + D A K+MV G PD+ +Y L
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 135/310 (43%), Gaps = 40/310 (12%)
Query: 356 QLEEAEGLFQEMKTKGLKPTSATF-----------------------------------N 380
+L++A LF EM P+ F N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 381 ILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAA--DAFLRM 438
IL++ + RR Q + +L ++ +G EP+ + + L++ Y +++S+ A D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 439 KRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDT 498
+ +P + ++ LIH + +A A + M+ +P + TY +++ + GD
Sbjct: 180 EY---QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 499 GMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNML 558
+ + + K M K+E V + ++D +A ++ +E G++P ++TYN L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 559 MNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQ 618
+ G+ S +LL +M I P+ VT+S +I AFV+ A + +M+K
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 619 VPDVKSYEKL 628
PD+ +Y L
Sbjct: 357 DPDIFTYSSL 366
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 1/208 (0%)
Query: 212 RARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHV 271
+A+ ++ M LF+ + Q + YN I GLF G D A K ++ M ++ V PD +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 272 TCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQME 331
T SI++ + K G+ K A FE + + ++ +++ C G + +
Sbjct: 467 TYSILLDGLCKYGKLEK-ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 332 MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ 391
+ KG+ N I+Y T+I+ +C+ EEA+ LF+EMK G P S T+N L+ A R
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 392 PEIVEKLLLELQDMGLEPNAKSYTCLIS 419
+L+ E++ G +A + + +I+
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 37/180 (20%)
Query: 220 MVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITA 279
+V+F+ L +SK D + YN I G+ G+ +D W + ++ V+P+ + + MI+
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 280 MRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPS 339
FC +GLK EA + EM++ G
Sbjct: 545 ------------------------------------FCRKGLKEEADALFREMKEDGTLP 568
Query: 340 NAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDA-YSRRMQPEIVEKL 398
N+ YNTLI A + + L +EM++ G ++T +++++ + R++ +E L
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 3/215 (1%)
Query: 429 DMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTAL 488
D A D F M + P+ + L+ A + + + E M I + +Y L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 489 LDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGL 548
++ F R + + + MM E VT + LL+G+ + EA +V + +
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 549 QPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFF 608
QP +T+N L++ + S+ L+ M +PD TY T++ + D A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 609 YHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRRD 643
K+M K DV Y +I+D KN D
Sbjct: 242 LLKKMEKGKIEADVVIYT---TIIDALCNYKNVND 273
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 174/328 (53%), Gaps = 2/328 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
+ Y I+GLF G ++ YE M+ + V P+ T + ++ + K+GR+ K+A++
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT-KDAFQV 290
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F++M +GV + L+ C E NEA + +M+ GI N I YNTLI+ +C
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L +A L +++K++GL P+ T+NIL+ + R+ K++ E+++ G++P+ +
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
YT LI + R M + A L M+ +G+ P H+Y+ LIH + + G +A F++M
Sbjct: 411 YTILIDTFARSDNM-EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + +P+ Y ++ + + G + +K+ K M +++ ++ +++ K+ +
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNA 561
EA +V + G+ P+ +++ A
Sbjct: 530 KEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 183/396 (46%), Gaps = 42/396 (10%)
Query: 286 SAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYN 345
S + W FF + N+ V L G L+K C+ G ++ + +E+ + G N ++Y
Sbjct: 144 SFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYT 202
Query: 346 TLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSR------------RMQPE 393
TLI+ CK ++E+A+ LF EM GL T+ +L++ + +MQ +
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 394 IV-----------------------EKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDM 430
V ++ E+++ G+ N +Y LI R K+++
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE- 321
Query: 431 AADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLD 490
A +MK GI P +Y LI + G KA + ++ + PS+ TY L+
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 491 AFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQP 550
F R GDT K+ K M ++ ++VT+ IL+D FA+ +A + ++GL P
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 551 TLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYH 610
+ TY++L++ + GQ ++ +L K M N +P+ V Y+TMI + + RA
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 611 KQMVKSGQVPDVKSYEKLRSILDVKVATKNRRDKSA 646
K+M + P+V SY + ++V K R+ K A
Sbjct: 502 KEMEEKELAPNVASYRYM-----IEVLCKERKSKEA 532
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 166/357 (46%), Gaps = 2/357 (0%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
+Y I G G + A + M + + T +++I + KNG K+ +E +EK
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG-VKKQGFEMYEK 258
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
M GV + +M C +G +A + EM ++G+ N + YNTLI C+ +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
L EA + +MK+ G+ P T+N L+D + + L +L+ GL P+ +Y
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 417 LISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLRE 476
L+S + R S AA M+ GIKP+ +YT LI ++ EKA +M
Sbjct: 379 LVSGFCRKGDTSG-AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 477 EIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEA 536
+ P + TY+ L+ F G +++K M+ + E V +N ++ G+ K+G A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 537 RDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
++ E + L P + +Y ++ + ++ + +L+++M I P + S +
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 182/404 (45%), Gaps = 14/404 (3%)
Query: 223 FKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRK 282
F N +SK D + + I G G + ++ + P+ V + +I K
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 283 NGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAI 342
G K FFE M + G+ ++ L+ G+K + + +M++ G+ N
Sbjct: 211 KGEIEKAKDLFFE-MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLEL 402
YN ++N CK + ++A +F EM+ +G+ T+N L+ R M+ K++ ++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 403 QDMGLEPNAKSYTCLISAY---GRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSV 459
+ G+ PN +Y LI + G+ K + D +K G+ P+ +Y L+ +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD----LKSRGLSPSLVTYNILVSGFCR 385
Query: 460 GGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRV- 518
G A + M IKPS TYT L+D F RS + M K +L +S + G
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN---MEKAIQLRLSMEELGLVPD 442
Query: 519 --TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
T+++L+ GF +GQ EA + + +P + YN ++ Y + G + + +LLK
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVP 620
EM + P+ +Y MI + R K A ++M+ SG P
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 236/541 (43%), Gaps = 74/541 (13%)
Query: 153 GSLPDGIGRVSKRECVQLLELMANDGLLGCCLYFYEWMRLQEPSLVSPRACSVLFPVLGR 212
G L +GR +++ L+ ++ G + C+ ++WM++Q+ +++ + R
Sbjct: 96 GVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHAR 155
Query: 213 ARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRY-------DDAWKAY------- 258
D LF + + DA Y+A I+ G++ DD +A
Sbjct: 156 HNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRST 215
Query: 259 ---------------EAMEA------NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
EA+E N V PD VT +I+++A K+GR +A +FE M
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYFELM 274
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPS--NAIVYNTLINAYCKSN 355
V+ ++ G ++AL + M +K + + + ++++ Y
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
++E +F+ M +GLKP ++N LM AY+ +L +++ G+ P+ SYT
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 416 CLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLR 475
CL+++YGR R+ A + FL M++ KP +Y ALI AY G+ +A F M +
Sbjct: 395 CLLNSYGRSRQPGK-AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 476 EEIKPSIETYTALLDAFRRSG-----DTGM------------------------------ 500
+ IKP++ + LL A RS DT +
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 501 MMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMN 560
+ +++ M +KV+ VTF IL+ G + +Y EA + E + + T Y+ ++
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 573
Query: 561 AYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVP 620
AY + GQ ++ + +M +PD + Y++M++A+ + +A +M +G P
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 633
Query: 621 D 621
D
Sbjct: 634 D 634
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 147/296 (49%), Gaps = 3/296 (1%)
Query: 331 EMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRM 390
EM+K +A Y+ LINA+ ++ Q A L +M + P+ +T+N L++A
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 391 QPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSY 450
++ ++ D G+ P+ ++ ++SAY R+ S A F MK ++P + ++
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK-ALSYFELMKGAKVRPDTTTF 286
Query: 451 TALIHAYSVGGWHEKAYAAFENML--REEIKPSIETYTALLDAFRRSGDTGMMMKIWKLM 508
+I+ S G +A F +M R E +P + T+T+++ + G+ +++ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 509 MSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQT 568
++E ++ V++N L+ +A G A V+ + + G+ P +++Y L+N+YGR Q
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 569 SKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKS 624
K ++ M KP+ VTY+ +I A+ A +QM + G P+V S
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 209/467 (44%), Gaps = 15/467 (3%)
Query: 170 LLELMANDGLLGCCLYFYEWMRLQ--EPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLP 227
++ L + G + C +E M + +P++VS A + V G M + + ++
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG---MSGTALSVLGDIK 382
Query: 228 QSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEA---MEANNVRPDHVTCSIMITAMRKNG 284
Q+ D Y ++ GR KA E M +P+ VT + +I A NG
Sbjct: 383 QNGIIPDVVSYTCLLNSY---GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 285 RSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVY 344
A EA E F +M + G+K + V L+ + K + + +GI N Y
Sbjct: 440 FLA-EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 345 NTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ-PEIVEKLLLELQ 403
N+ I +Y + +LE+A L+Q M+ K +K S TF IL+ R + PE + L E++
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS-YLKEME 557
Query: 404 DMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWH 463
D+ + + Y+ ++ AY + ++++ A F +MK G +P +YT+++HAY+
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTE-AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 464 EKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNIL 523
KA F M I+P +AL+ AF + G + + LM +++ T F +
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 676
Query: 524 LDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNI 583
++ A D++ ++ N +++ +G+ G+ + +L ++ +
Sbjct: 677 FSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGV 736
Query: 584 KPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
+ TY+ ++ + V ++++ + M +G P + Y + S
Sbjct: 737 GINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Query: 450 YTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMM 509
Y +I ++ W ++A F M + KP ETY AL++A R+G M + M+
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 510 SEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTS 569
+ +R T+N L++ G + EA +V + G+ P L+T+N++++AY G Q S
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 570 KLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAF-FYHKQMVKSGQV-PDVKSYEK 627
K + M ++PD+ T++ +IY ++ +A ++ K + PDV ++
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 628 LRSILDVKVATKNRR 642
+ + VK +N R
Sbjct: 326 IMHLYSVKGEIENCR 340
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 150/357 (42%), Gaps = 41/357 (11%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAK--EAW 291
+ YN+AI + A Y++M V+ D VT +I+I+ + R +K EA
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG---SCRMSKYPEAI 550
Query: 292 EFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAY 351
+ ++M + L++EV +++ ++ +G EA I +M+ G + I Y ++++AY
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 352 CKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNA 411
S + +A LF EM+ G++P S + LM A+++ QP V L D+
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV----FVLMDL------ 660
Query: 412 KSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFE 471
M+ I T + + A + ++A +
Sbjct: 661 --------------------------MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQ 694
Query: 472 NMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQG 531
M SI +L F +SG MMK++ +++ V T+ ILL+ G
Sbjct: 695 MMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVG 754
Query: 532 QYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSV 588
+ + +V+ G+QP+ Y +++ R P + +++ +L K + +
Sbjct: 755 NWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLESLRNKGEGL 811
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 191/398 (47%), Gaps = 13/398 (3%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEAN-NVRPDHVTCSIMITAMRKNGRSAKEAWE 292
D+H+ + + G DA K ++ M P+ V+ SI+I + + GR +EA+
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR-LEEAFG 287
Query: 293 FFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYC 352
++M KG + S L+K+ CD GL ++A + EM +G N Y LI+ C
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 353 KSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSR--RMQPEIVEKLLLELQDMGLEPN 410
+ ++EEA G+ ++M + P+ T+N L++ Y + R+ P +LL ++ +PN
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF--ELLTVMEKRACKPN 405
Query: 411 AKSYTCLISA---YGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAY 467
+++ L+ G+P K A RM G+ P SY LI G AY
Sbjct: 406 VRTFNELMEGLCRVGKPYK----AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 468 AAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGF 527
+M +I+P T+TA+++AF + G + LM+ + + VT L+DG
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 528 AKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDS 587
K G+ +A ++ K+ + T + N++++ +G + + +L ++ L + P
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581
Query: 588 VTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
VTY+T++ +R D +F + M SG +P+V Y
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 619
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 178/388 (45%), Gaps = 2/388 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
Y+ I GL GR ++A+ + M +P T +++I A+ G K A+ F++M
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK-AFNLFDEM 327
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
+G K + L+ C +G EA + +M K I + I YN LIN YCK ++
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
A L M+ + KP TFN LM+ R +P LL + D GL P+ SY L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I R M + A M I+P ++TA+I+A+ G + A A MLR+
Sbjct: 448 IDGLCREGHM-NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
I T T L+D + G T + I + ++ ++ T + N++LD +K + E
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
++ + K+GL P+++TY L++ R G + ++L+ M P+ Y+ +I
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 598 VRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
+ + A M SG P+ +Y
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 42/349 (12%)
Query: 254 AWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFF-EKMNRKGVKLSQEVVGAL 312
A+ Y MEA+ + ++ A+ KNG + EA E F K+ + G L + +L
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYT--EAAEMFMSKILKIGFVLDSHIGTSL 236
Query: 313 MKSFCDEGLK-NEALIIQMEMEKKGIPS-NAIVYNTLINAYCKSNQLEEAEGLFQEMKTK 370
+ FC GL +AL + M K+ + N++ Y+ LI+ C+ +LEEA GL +M K
Sbjct: 237 LLGFC-RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 371 GLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDM 430
G +P++ ++YT LI A R + D
Sbjct: 296 GCQPST-----------------------------------RTYTVLIKALC-DRGLIDK 319
Query: 431 AADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLD 490
A + F M G KP H+YT LI G E+A M+++ I PS+ TY AL++
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 491 AFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQP 550
+ + G ++ +M + TFN L++G + G+ +A ++ GL P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 551 TLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVR 599
+++YN+L++ R G + +LL M +I+PD +T++ +I AF +
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 154/331 (46%), Gaps = 6/331 (1%)
Query: 274 SIMITAMRKNGRSAKEA----WEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQ 329
++++ +++ R KE + F E G +L+ +L+ S L A +
Sbjct: 124 AVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTY 183
Query: 330 MEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRR 389
ME G I Y T++NA CK+ E AE ++ G S L+ + R
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 390 MQPEIVEKLL-LELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSH 448
+ K+ + +++ PN+ SY+ LI ++ + A +M G +P++
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE-AFGLKDQMGEKGCQPSTR 302
Query: 449 SYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLM 508
+YT LI A G +KA+ F+ M+ KP++ TYT L+D R G + + M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 509 MSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQT 568
+ +++ + +T+N L++G+ K G+ + A ++++ K +P + T+N LM R G+
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 569 SKLPQLLKEMATLNIKPDSVTYSTMIYAFVR 599
K LLK M + PD V+Y+ +I R
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 165/408 (40%), Gaps = 48/408 (11%)
Query: 200 PRAC-------SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYD 252
PR C +VL L R ++ + + + + + F YNA I+G +C
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING--YC---- 382
Query: 253 DAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGAL 312
K+GR A+E M ++ K + L
Sbjct: 383 -----------------------------KDGRVVP-AFELLTVMEKRACKPNVRTFNEL 412
Query: 313 MKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGL 372
M+ C G +A+ + M G+ + + YN LI+ C+ + A L M +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 373 KPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSD--M 430
+P TF +++A+ ++ + ++ L + G+ + + T LI + K D
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 431 AADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLD 490
+ ++M+ I T HS ++ S G ++ A + + + PS+ TYT L+D
Sbjct: 533 ILETLVKMR---ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 491 AFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQP 550
RSGD +I +LM + I+++G + G+ EA ++S G+ P
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 551 TLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFV 598
+TY +++ Y G+ + + ++ M + + YS+++ FV
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 41/237 (17%)
Query: 211 GRARMGD--------DLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAME 262
G R GD +LM L LP + + Y I+GL GR ++A K AM+
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLP------NVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 263 ANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFC--DEG 320
+ V P+HVT ++M+ NG+ + A E M +G +L+ + +L++ F +G
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDR-ALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Query: 321 LKNE--------AL----------IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEG 362
+ N AL +I + + G S ++ L+ CK + +E+
Sbjct: 703 IDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESND 760
Query: 363 LFQEMKTKGLKPTSATFNILMDAY-SRRMQPEIVEKLLLELQDMGLEPNAKSYTCLI 418
L Q + +G+ A +I+M++Y S++ + +E + L L+ G P+ KS+ CL+
Sbjct: 761 LVQNVLERGVFLEKA-MDIIMESYCSKKKHTKCMELITLVLKS-GFVPSFKSF-CLV 814
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/350 (18%), Positives = 138/350 (39%), Gaps = 48/350 (13%)
Query: 154 SLPDGIGRVSK-RECVQLLELMANDGLLGCCLYFYEWMRLQEPSLVSPRACSVLFPVLGR 212
+L DG+ +V K R+ + +LE + MR+ L +P + +V+ +L +
Sbjct: 516 TLIDGVCKVGKTRDALFILETLVK-------------MRI----LTTPHSLNVILDMLSK 558
Query: 213 ARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVT 272
+ + + + + Y + GL G +++ E M+ + P+
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 273 CSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEM 332
+I+I + + GR +EA + M GV + ++K + + G + AL M
Sbjct: 619 YTIIINGLCQFGR-VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Query: 333 EKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQP 392
++G N +Y++L+ + S KG+ + + + D R P
Sbjct: 678 VERGYELNDRIYSSLLQGFVLSQ--------------KGIDNSEES--TVSDIALRETDP 721
Query: 393 EIVEKLLLELQDMGLEPNAKSYTCL-----ISAYGRPRKMSDMAADAFLRMKRVGIKPTS 447
E + +L+ ++ +G S C+ + GR + +D+ + R G+
Sbjct: 722 ECINELISVVEQLG---GCISGLCIFLVTRLCKEGRTDESNDLVQNVLER----GV-FLE 773
Query: 448 HSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGD 497
+ ++ +Y H K +L+ PS +++ ++ ++ GD
Sbjct: 774 KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGD 823
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 184/391 (47%), Gaps = 6/391 (1%)
Query: 236 HVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFE 295
+ + +SGLF G DA K + M NV+P+ VT ++MI + G +K A+EF +
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK-AFEFLK 566
Query: 296 KMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSN 355
+M KG+ L+ C G +EA + + K N I Y L++ +C+
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
+LEEA + QEM +G+ + +L+D + ++ LL E+ D GL+P+ YT
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686
Query: 416 CLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLR 475
+I A + + A + M G P +YTA+I+ G+ +A M
Sbjct: 687 SMIDAKSKTGDFKE-AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 476 EEIKPSIETYTALLDAFRRSGDTGMM--MKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
P+ TY LD + G+ M +++ ++ + T T+N+L+ GF +QG+
Sbjct: 746 VSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANT-ATYNMLIRGFCRQGRI 803
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
EA ++++ G+ P +TY ++N R K +L M I+PD V Y+T+
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKS 624
I+ + +A +M++ G +P+ K+
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 198/409 (48%), Gaps = 13/409 (3%)
Query: 238 YNAAISGLFWCGRYDDAWKAY---EAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFF 294
YN I GL + W+A + + +++PD VT ++ + K + + E
Sbjct: 265 YNVLIDGLC---KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV-QEFEIGLEMM 320
Query: 295 EKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKS 354
++M S+ V +L++ G EAL + + G+ N VYN LI++ CK
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 355 NQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSY 414
+ EAE LF M GL+P T++IL+D + RR + + L E+ D GL+ + Y
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 415 TCLISAYGRPRKMSDMAADAFL-RMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
LI+ + + +S AA+ F+ M ++PT +YT+L+ Y G KA + M
Sbjct: 441 NSLINGHCKFGDIS--AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ I PSI T+T LL R+G +K++ M V+ RVT+N++++G+ ++G
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+A + + E + G+ P +Y L++ GQ S+ + + N + + + Y+ +
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRR 642
++ F R + A ++MV+ G D+ Y L +D + K+R+
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL---IDGSLKHKDRK 664
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 191/415 (46%), Gaps = 2/415 (0%)
Query: 214 RMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTC 273
R+ D ++V + + + +A + GL + A + + M + +RPD
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 274 SIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEME 333
+ +I ++ + + A E M G ++ L+ C + EA+ I+ ++
Sbjct: 231 TGVIRSLCEL-KDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 334 KKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPE 393
K + + + Y TL+ CK + E + EM P+ A + L++ +R + E
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 394 IVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTAL 453
L+ + D G+ PN Y LI + + RK + A F RM ++G++P +Y+ L
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE-AELLFDRMGKIGLRPNDVTYSIL 408
Query: 454 IHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKV 513
I + G + A + M+ +K S+ Y +L++ + GD M+++K+
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 514 EGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQ 573
E T VT+ L+ G+ +G+ +A + E G+ P++ T+ L++ R G +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 574 LLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
L EMA N+KP+ VTY+ MI + D +AF + K+M + G VPD SY L
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 167/390 (42%), Gaps = 39/390 (10%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
VYNA I L ++ +A ++ M +RP+ VT SI+I + G+ A F +
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK-LDTALSFLGE 427
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
M G+KLS +L+ C G + A EM K + + Y +L+ YC +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
+ +A L+ EM KG+ P+ TF L+ R KL E+ + ++PN +Y
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 417 LISAYGRPRKMSDMAADAFLR-MKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLR 475
+I Y MS A FL+ M GI P ++SY LIH + G +A + + +
Sbjct: 548 MIEGYCEEGDMS--KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 476 EEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLE 535
+ + YT LL F R G + + + M+ V+ V + +L+DG K
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH----- 660
Query: 536 ARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIY 595
+D FG LLKEM +KPD V Y++MI
Sbjct: 661 -KDRKLFFG-----------------------------LLKEMHDRGLKPDDVIYTSMID 690
Query: 596 AFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
A + DFK AF M+ G VP+ +Y
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 142/350 (40%), Gaps = 60/350 (17%)
Query: 335 KGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY-------- 386
+G + + LI+A K+N A L Q + + LKP S FN+L Y
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP-SDVFNVLFSCYEKCKLSSS 156
Query: 387 ------------SRR-MQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAAD 433
SRR + +V K++ + + L P ++ + L+ + R +A +
Sbjct: 157 SSFDLLIQHYVRSRRVLDGVLVFKMM--ITKVSLLPEVRTLSALLHGLVKFRHFG-LAME 213
Query: 434 AFLRMKRVGIKPTSHSYTALIHAYS------------------------------VGGWH 463
F M VGI+P + YT +I + + G
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 464 EK-----AYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRV 518
+K A +++ +++KP + TY L+ + + + +++ M+ + +
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
Query: 519 TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
+ L++G K+G+ EA ++V G+ P L YN L+++ +G + + L M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 579 ATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ ++P+ VTYS +I F R A + +MV +G V Y L
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 194/412 (47%), Gaps = 11/412 (2%)
Query: 217 DDLMVLFKNLPQSKEFR-DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSI 275
D ++++ + + + F+ D +N I +Y +A Y + + P T ++
Sbjct: 136 DSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL 195
Query: 276 MITAMRKNGRSAKEAWEFFEKMNRK------GVKLSQEVVGALMKSFCDEGLKNEALIIQ 329
+I A G + E N GV + + LMK +G EA+ +
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR---KGNTEEAIDVF 252
Query: 330 MEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRR 389
M++ YN +IN Y K+++ + L+ EM++ KP T+ L++A++R
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312
Query: 390 MQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHS 449
E E++ +LQ+ GLEP+ Y L+ +Y R AA+ F M+ +G +P S
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA-GYPYGAAEIFSLMQHMGCEPDRAS 371
Query: 450 YTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMM 509
Y ++ AY G H A A FE M R I P+++++ LL A+ ++ D I K M
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 510 SEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTS 569
VE N +L+ + + GQ+ + +++E + TYN+L+N YG+ G
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 491
Query: 570 KLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPD 621
++ +L E+ N +PD VT+++ I A+ R + + + ++M+ SG PD
Sbjct: 492 RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 198/461 (42%), Gaps = 20/461 (4%)
Query: 146 DEAKQQMGSLP------DGIGRVSKRECVQLLELMANDGLLGCCLYFYEWMRLQEPSLVS 199
D+ +G+LP D + VS VQL D ++ C EW+ L++ S
Sbjct: 103 DKVADVLGALPSTHASWDDLINVS----VQLRLNKKWDSIILVC----EWI-LRKSSFQP 153
Query: 200 PRAC-SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAY 258
C ++L G+ + L+ L +S+ Y I G + A
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 259 EAMEANNVRPDHVTCSIM---ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKS 315
M+ ++V P + ++ I + K + +EA + F++M R K + E ++
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 316 FCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPT 375
+ + + EM N Y L+NA+ + E+AE +F++++ GL+P
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 376 SATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAF 435
+N LM++YSR P ++ +Q MG EP+ SY ++ AYGR SD A F
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA-VF 392
Query: 436 LRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRS 495
MKR+GI PT S+ L+ AYS K A + M ++P ++L+ + R
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 496 GDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTY 555
G M KI M + T+NIL++ + K G ++ E + +P ++T+
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512
Query: 556 NMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA 596
+ AY R K ++ +EM PD T ++ A
Sbjct: 513 TSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 162/344 (47%), Gaps = 38/344 (11%)
Query: 326 LIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDA 385
L+ + + K + I +N LI+AY + Q +EAE L+ ++ PT T+ +L+ A
Sbjct: 140 LVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 199
Query: 386 YSRRMQPEIVEKLLLELQDMGLEP---NAKSYTCLISAYGRPRKMSDMAADAFLRMKRVG 442
Y E E +L+E+Q+ + P Y I + + ++ A D F RMKR
Sbjct: 200 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 259
Query: 443 IKPTSHS-----------------------------------YTALIHAYSVGGWHEKAY 467
KPT+ + YTAL++A++ G EKA
Sbjct: 260 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 319
Query: 468 AAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGF 527
FE + + ++P + Y AL++++ R+G +I+ LM E R ++NI++D +
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 528 AKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDS 587
+ G + +A V E ++G+ PT+ ++ +L++AY + +K ++KEM+ ++PD+
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 588 VTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSI 631
++M+ + R+ F + +M D+ +Y L +I
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 143/311 (45%), Gaps = 6/311 (1%)
Query: 254 AWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALM 313
+WK Y M ++ +P+ T + ++ A + G K A E FE++ G++ V ALM
Sbjct: 283 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK-AEEIFEQLQEDGLEPDVYVYNALM 341
Query: 314 KSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLK 373
+S+ G A I M+ G + YN +++AY ++ +AE +F+EMK G+
Sbjct: 342 ESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA 401
Query: 374 PTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAAD 433
PT + +L+ AYS+ E ++ E+ + G+EP+ +++ YGR + + M
Sbjct: 402 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME-K 460
Query: 434 AFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFR 493
M+ +Y LI+ Y G+ E+ F + + +P + T+T+ + A+
Sbjct: 461 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 520
Query: 494 RSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGK----IGLQ 549
R +++++ M+ T +LL + + Q + V+ K L
Sbjct: 521 RKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLV 580
Query: 550 PTLMTYNMLMN 560
P LM ++ +N
Sbjct: 581 PKLMAKSLTVN 591
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 214/510 (41%), Gaps = 45/510 (8%)
Query: 164 KRECVQLLELMANDGLLGCCLYFYEWMRLQEPS---LVSPRACSVLFPVLGRARMGDDLM 220
+ + V L++ + + G ++ +EW+ L S + + + +LGR
Sbjct: 136 RTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAA 195
Query: 221 VLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAM 280
L +P + D Y + G+Y+ A +E M+ P VT ++++
Sbjct: 196 KLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF 255
Query: 281 RKNGRS-----------------------------------AKEAWEFFEKMNRKGVKLS 305
K GRS +EA EFF ++ G +
Sbjct: 256 GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG 315
Query: 306 QEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQ 365
AL++ F G+ EAL + EME+ P++++ YN L+ AY ++ +EA G+ +
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 366 EMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPR 425
M KG+ P + T+ ++DAY + + + KL +++ G PN +Y ++S G+
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 426 KMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETY 485
+ ++M MK G P ++ ++ G + F M +P +T+
Sbjct: 436 RSNEM-IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Query: 486 TALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGK 545
L+ A+ R G K++ M T+N LL+ A++G + +V+S+
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 546 IGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDF-- 603
G +PT +Y++++ Y +GG + ++ + I P + T++ A + R
Sbjct: 555 KGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG 614
Query: 604 -KRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+RAF K K G PD+ + + SI
Sbjct: 615 SERAFTLFK---KHGYKPDMVIFNSMLSIF 641
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 204/418 (48%), Gaps = 2/418 (0%)
Query: 211 GRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDH 270
G+A D+ + LF ++ ++ + YNA +S L R ++ K M++N P+
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNR 456
Query: 271 VTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQM 330
T + M+ A+ N K F +M G + ++ L+ ++ G + +A +
Sbjct: 457 ATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 331 EMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRM 390
EM + G + YN L+NA + E + +MK+KG KPT ++++++ Y++
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 391 QPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSY 450
+E++ +++ + P+ L+ A + R ++ + AF K+ G KP +
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG-SERAFTLFKKHGYKPDMVIF 634
Query: 451 TALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMS 510
+++ ++ +++A E++ + + P + TY +L+D + R G+ +I K +
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 511 EKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSK 570
+++ V++N ++ GF ++G EA ++SE + G++P + TYN ++ Y G ++
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 571 LPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ +++ MA + +P+ +T+ ++ + R + A + ++ D +S ++L
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRL 812
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 12/298 (4%)
Query: 346 TLINAYCKSNQLEEAEGLFQEM----KTKGLKPTSATFNILMDAYSRRMQPEIVEKLL-- 399
+L+ S E A LF+ + + LK I + R Q + KLL
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 400 LELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSV 459
+ LQ+ L+ ++YT ++ AY R K + A D F RMK +G PT +Y ++ +
Sbjct: 201 IPLQEYLLD--VRAYTTILHAYSRTGKY-EKAIDLFERMKEMGPSPTLVTYNVILDVFGK 257
Query: 460 GG--WHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTR 517
G W K + M + +K T + +L A R G + + + S E
Sbjct: 258 MGRSWR-KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316
Query: 518 VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKE 577
VT+N LL F K G Y EA V+ E + +TYN L+ AY R G + + +++
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 578 MATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVK 635
M + P+++TY+T+I A+ + A M ++G VP+ +Y + S+L K
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 204/437 (46%), Gaps = 28/437 (6%)
Query: 210 LGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPD 269
LGR + ++M++ P K ++N+ + G + A+K + M P
Sbjct: 353 LGRCKRVLNMMMMEGCYPSPK------IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 406
Query: 270 HVTCSIMITAMRKNGRSAKE-----AWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNE 324
+V +I+I ++ + S A + + +M GV L++ V + + C G +
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466
Query: 325 ALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMD 384
A + EM +G + Y+ ++N C ++++E A LF+EMK GL T+ I++D
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 385 AYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIK 444
++ + E K E++++G PN +YT LI AY + +K+S A + F M G
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS-YANELFETMLSEGCL 585
Query: 445 PTSHSYTALIHAYSVGGWHEKAYAAFENMLREEI----------------KPSIETYTAL 488
P +Y+ALI + G EKA FE M + +P++ TY AL
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 489 LDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGL 548
LD F +S K+ M E E ++ ++ L+DG K G+ EA++V +E + G
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 549 QPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFF 608
TL TY+ L++ Y + + ++L +M + P+ V Y+ MI +V A+
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 609 YHKQMVKSGQVPDVKSY 625
+ M + G P+V +Y
Sbjct: 766 LMQMMEEKGCQPNVVTY 782
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 201/479 (41%), Gaps = 58/479 (12%)
Query: 221 VLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAM 280
+LF+ + + D + Y + G + A K + M P+ VT + +I A
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 281 RKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL-IIQMEMEKKGIPS 339
K + A E FE M +G + AL+ C G +A I + K +P
Sbjct: 564 LK-AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 340 ---------------NAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMD 384
N + Y L++ +CKS+++EEA L M +G +P ++ L+D
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 385 AYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIK 444
+ + + +++ E+ + G +Y+ LI Y + ++ D+A+ +M
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR-QDLASKVLSKMLENSCA 741
Query: 445 PTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKI 504
P YT +I G ++AY + M + +P++ TYTA++D F G +++
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 505 WKLMMSEKVEGTRVTFNILLDGFAKQG--------------------------------- 531
+ M S+ V VT+ +L+D K G
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Query: 532 QYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLN--IKPDSVT 589
+++E+ ++ E G+ P L Y +L++ + + +LL+E+AT + + S T
Sbjct: 862 EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSST 921
Query: 590 YSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRRDKSAIL 648
Y+++I + + AF +M K G +P+++S+ L +K +N + A+L
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL-----IKGLFRNSKISEALL 975
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 169/417 (40%), Gaps = 16/417 (3%)
Query: 221 VLFKNLPQSKEFR---DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMI 277
+ + L + K+FR YN I R D A + M N+R D T
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 278 TAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV--GALMKSFCDEGLKNEALIIQMEMEKK 335
++ K G+ +EA E N + V L+ C+ L EA+ M
Sbjct: 278 YSLCKVGK-WREALTLVETEN-----FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRAT 331
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIV 395
N + Y+TL+ QL + + M +G P+ FN L+ AY
Sbjct: 332 SCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAYGRPRK-----MSDMAADAFLRMKRVGIKPTSHSY 450
KLL ++ G P Y LI + + + D+A A+ M G+ +
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 451 TALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMS 510
++ G +EKA++ M+ + P TY+ +L+ + + +++ M
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 511 EKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSK 570
+ T+ I++D F K G +AR +E ++G P ++TY L++AY + + S
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 571 LPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEK 627
+L + M + P+ VTYS +I + ++A ++M S VPDV Y K
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 160/400 (40%), Gaps = 53/400 (13%)
Query: 249 GRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEV 308
G+Y+ A+ M PD T S ++ + N + A+ FE+M R G+
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL-CNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 309 VGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMK 368
++ SFC GL +A EM + G N + Y LI+AY K+ ++ A LF+ M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 369 TKGLKPTSATFNILMDAYSRRMQPE----IVEKL-------------------------- 398
++G P T++ L+D + + Q E I E++
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 399 --------------------LLELQDM-GLEPNAKSYTCLISAYGRPRKMSDMAADAFLR 437
LL+ M G EPN Y LI + K+ D A +
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL-DEAQEVKTE 699
Query: 438 MKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGD 497
M G T ++Y++LI Y + A ML P++ YT ++D + G
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 498 TGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNM 557
T K+ ++M + + VT+ ++DGF G+ +++ G G+ P +TY +
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 558 LMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
L++ + G LL+EM + + Y +I F
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 129/335 (38%), Gaps = 39/335 (11%)
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIV 395
G A VYN L++ + + + E Q+++ + N+L+ + R I
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAY------------GRPRKMSDMAADAF-LR----- 437
+ L L+D P+ +Y CLI A+ R ++++ D F LR
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 438 MKRVG-------------IKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIET 484
+ +VG P + YT LI E+A M P++ T
Sbjct: 280 LCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339
Query: 485 YTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFG 544
Y+ LL G ++ +MM E + FN L+ + G + A ++ +
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 545 KIGLQPTLMTYNMLMNAYGRGGQTSKLPQLL-------KEMATLNIKPDSVTYSTMIYAF 597
K G P + YN+L+ + G + S LL EM + + + S+
Sbjct: 400 KCGHMPGYVVYNILIGSIC-GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458
Query: 598 VRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+++AF ++M+ G +PD +Y K+ + L
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 38/198 (19%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
Y A I G G+ + + E M + V P++VT ++I KNG + A E+M
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG-ALDVAHNLLEEM 840
Query: 298 NRKG----VKLSQEVVGALMKSFCDE-GLKNEA-------------LII-------QMEM 332
+ ++V+ K F + GL +E L+I ++EM
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 333 -----EKKGIPSNAIV-----YNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNIL 382
E+ S +V YN+LI + C +N++E A LF EM KG+ P +F L
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 383 MDAYSRRMQPEIVEKLLL 400
+ R +I E LLL
Sbjct: 961 IKGLFR--NSKISEALLL 976
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 193/413 (46%), Gaps = 2/413 (0%)
Query: 216 GDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSI 275
DD + LF+++ QS+ +N S + +Y+ + ME+ + T SI
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 276 MITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKK 335
MI + R A+ K+ + G + + L+ C E +EAL + M +
Sbjct: 129 MINCFCR-CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIV 395
G I NTL+N C + ++ +A L M G +P T+ +++ + Q +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIH 455
+LL ++++ ++ +A Y+ +I + + D A + F M+ G K +Y LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSL-DNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 456 AYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG 515
+ G + +M++ +I P++ T++ L+D+F + G ++ K MM +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 516 TRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLL 575
+T+N L+DGF K+ + EA +V G P +MT+N+L+N Y + + +L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 576 KEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+EM+ + ++VTY+T++ F + + A ++MV PD+ SY+ L
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 195/415 (46%), Gaps = 2/415 (0%)
Query: 218 DLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMI 277
D +VL + ++ + Y ++ + G+ A + ME N++ D V SI+I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 278 TAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGI 337
+ K+G S A+ F +M KG K L+ FC+ G ++ + +M K+ I
Sbjct: 271 DGLCKDG-SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 338 PSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEK 397
N + ++ LI+++ K +L EA+ L +EM +G+ P + T+N L+D + + + E +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 398 LLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAY 457
++ + G +P+ ++ LI+ Y + ++ D + F M G+ + +Y L+ +
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDD-GLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 458 SVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTR 517
G E A F+ M+ ++P I +Y LLD +G+ ++I+ + K+E
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 518 VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKE 577
+ I++ G + +A D+ G++ YN++++ R SK L ++
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 578 MATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
M PD +TY+ +I A + D A ++M SG DV + + + ++L
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 186/420 (44%), Gaps = 2/420 (0%)
Query: 206 LFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANN 265
LF + + + + ++ L K + + + I+ C + A+ +
Sbjct: 94 LFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153
Query: 266 VRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEA 325
PD V + ++ + R EA E ++M G K + + L+ C G ++A
Sbjct: 154 YEPDTVIFNTLLNGLCLECR-VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 326 LIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDA 385
+++ M + G N + Y ++N CKS Q A L ++M+ + +K + ++I++D
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 386 YSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKP 445
+ + L E++ G + + +Y LI + + D A M + I P
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD-GAKLLRDMIKRKISP 331
Query: 446 TSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIW 505
+++ LI ++ G +A + M++ I P+ TY +L+D F + +++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 506 KLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRG 565
LM+S+ + +TFNIL++G+ K + + ++ E G+ +TYN L+ + +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 566 GQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
G+ +L +EM + ++PD V+Y ++ + ++A ++ KS D+ Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 151/332 (45%), Gaps = 2/332 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D YN I G GR+DD K M + P+ VT S++I + K G+ +EA +
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK-LREADQL 355
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++M ++G+ + +L+ FC E EA+ + M KG + + +N LIN YCK
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+N++++ LF+EM +G+ + T+N L+ + + + E+ +KL E+ + P+ S
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y L+ ++ + A + F ++++ ++ Y +IH + A+ F ++
Sbjct: 476 YKILLDGLCDNGEL-EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ +K Y ++ R +++ M E +T+NIL+
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRG 565
A +++ E G + T M++N G
Sbjct: 595 TTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 81/177 (45%)
Query: 449 SYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLM 508
SY + + VG + A F +M++ P++ + L A ++ +++ + K M
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 509 MSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQT 568
S+ + + T +I+++ F + + A + + K+G +P + +N L+N +
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 569 SKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
S+ +L+ M + KP +T +T++ A +MV++G P+ +Y
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 245/559 (43%), Gaps = 43/559 (7%)
Query: 100 SQTPTQD---PPALGKLSLQKNRRSSWHLSPHV-----------------NSPNQSESDI 139
+QT T + PP ++ L+ R S WH+ HV +PN + + +
Sbjct: 33 AQTSTPESVLPPITSEILLESIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFV 92
Query: 140 NDISLEDEAKQQMGSLPDGIGRVSK-RECVQLLELMANDGLLGCCLYFYEWM----RLQE 194
N I L Q I ++S + QLL+ + F E + RL+
Sbjct: 93 NHIDLYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLET 152
Query: 195 PSLVSPRACSVLFPVLGRA----RMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGR 250
S ++LF +L R RM D+ + F + + + N ++ L R
Sbjct: 153 KS-------TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR 205
Query: 251 YDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVG 310
++AW Y M ++ + T +IMI + K G+ K+A F M G+K +
Sbjct: 206 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK-LKKAKGFLGIMEVFGIKPTIVTYN 264
Query: 311 ALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTK 370
L++ F G A +I EM+ KG + YN +++ C + E + +EMK
Sbjct: 265 TLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEI 321
Query: 371 GLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDM 430
GL P S ++NIL+ S E+ E+ G+ P +Y LI K+
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE-- 379
Query: 431 AADAFLR-MKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALL 489
AA+ +R ++ GI S +Y LI+ Y G +KA+A + M+ + I+P+ TYT+L+
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 490 DAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQ 549
R T ++++ ++ + ++ V N L+DG G A ++ E + +
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 550 PTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFY 609
P +TYN LM G+ + +L+ EM IKPD ++Y+T+I + + D K AF
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Query: 610 HKQMVKSGQVPDVKSYEKL 628
+M+ G P + +Y L
Sbjct: 560 RDEMLSLGFNPTLLTYNAL 578
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 163/359 (45%), Gaps = 5/359 (1%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
YN + G GR + A M++ +PD T + +++ M GR A E +M
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR----ASEVLREM 318
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
G+ L++ + G A + EM K+G+ YNTLI+ N++
Sbjct: 319 KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 378
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
E AE L +E++ KG+ S T+NIL++ Y + + L E+ G++P +YT L
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I R K + A + F ++ G+KP L+ + G ++A++ + M
Sbjct: 439 IYVLCRKNKTRE-ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
I P TY L+ G ++ M ++ +++N L+ G++K+G A
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA 596
V E +G PTL+TYN L+ + + +LL+EM + I P+ ++ ++I A
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 153/338 (45%), Gaps = 12/338 (3%)
Query: 303 KLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEG 362
+L +EVV + S L +E ++ +E K + I+++ L+ C+ ++EA
Sbjct: 123 QLLKEVVTSRKNSI--RNLFDELVLAHDRLETK----STILFDLLVRCCCQLRMVDEAIE 176
Query: 363 LFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYG 422
F MK KG P + T N ++ SR + E ++ M ++ N ++ +I+
Sbjct: 177 CFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLC 236
Query: 423 RPRKMSDMAADAFLRMKRV-GIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPS 481
+ K+ A FL + V GIKPT +Y L+ +S+ G E A M + +P
Sbjct: 237 KEGKLK--KAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPD 294
Query: 482 IETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVS 541
++TY +L G ++ + M + V++NIL+ G + G A
Sbjct: 295 MQTYNPILSWMCNEGRAS---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351
Query: 542 EFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVR 601
E K G+ PT TYN L++ + L++E+ I DSVTY+ +I + +
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 602 DFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATK 639
D K+AF H +M+ G P +Y L +L K T+
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D + N + G G D A+ + M+ ++ PD VT + ++ + G+ +EA E
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK-FEEAREL 524
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
+M R+G+K L+ + +G A +++ EM G + YN L+ K
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYS 387
+ + E AE L +EMK++G+ P ++F +++A S
Sbjct: 585 NQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 195/428 (45%), Gaps = 5/428 (1%)
Query: 194 EPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDD 253
EPS+V+ S L + D + L + + D + I GLF + +
Sbjct: 152 EPSIVTL---SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 254 AWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALM 313
A + M +P+ VT +++ + K G A+ KM ++ + + ++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRG-DIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 314 KSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLK 373
S C +++AL + EME KG+ N I Y++LI+ C + +A L +M + +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 374 PTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAAD 433
P TFN L+DA+ + + EKL E+ ++P+ +Y+ LI+ + ++ D A
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKH 386
Query: 434 AFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFR 493
F M P +Y LI+ + ++ F M + + + TYT L+ F
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 494 RSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLM 553
++ D ++K M+S+ V +T+N LLDG K G+ +A V + ++PT+
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 554 TYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQM 613
TYN+++ + G+ L ++ +KPD + Y+TMI F R + A ++M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 614 VKSGQVPD 621
+ G +PD
Sbjct: 567 REDGPLPD 574
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 195/412 (47%), Gaps = 2/412 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF + +S+ +N +S + ++D E M+ + + T +I+
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + + A KM + G + S + +L+ +C ++A+ + +M + G
Sbjct: 127 INCFCRRSQISL-ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ I + TLI+ N+ EA L M +G +P T+ ++++ +R ++
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ +E N Y+ +I + + R D A + F M+ G++P +Y++LI
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-ALNLFTEMENKGVRPNVITYSSLISC 304
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
A +M+ +I P++ T+ AL+DAF + G K++ M+ ++
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
T++ L++GF + EA+ + P ++TYN L+N + + + + +L +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
EM+ + ++VTY+T+I+ F + RD A KQMV G P++ +Y L
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 172/352 (48%), Gaps = 2/352 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
Y ++GL G D A+ MEA + + V S +I ++ K R +A F +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY-RHEDDALNLFTEM 286
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
KGV+ + +L+ C+ ++A + +M ++ I N + +N LI+A+ K +L
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
EAE L+ EM + + P T++ L++ + + + + + + PN +Y L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I+ + + +++ D + F M + G+ + +YT LIH + + A F+ M+ +
Sbjct: 407 INGFCKAKRI-DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
+ P+I TY LLD ++G M +++ + K+E T T+NI+++G K G+ +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVT 589
D+ G++P ++ YN +++ + R G + L ++M PDS T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 182/381 (47%), Gaps = 2/381 (0%)
Query: 250 RYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV 309
R DA + M RPD +T + +I + + + A EA ++M ++G + +
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVALVDRMVQRGCQPNLVTY 228
Query: 310 GALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKT 369
G ++ C G + A + +ME I +N ++Y+T+I++ CK ++A LF EM+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 370 KGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSD 429
KG++P T++ L+ + +LL ++ + + PN ++ LI A+ + K+ +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 430 MAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALL 489
A + M + I P +Y++LI+ + + ++A FE M+ ++ P++ TY L+
Sbjct: 349 -AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 490 DAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQ 549
+ F ++ +++++ M + G VT+ L+ GF + A+ V + G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 550 PTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFY 609
P +MTYN L++ + G+ K + + + ++P TY+ MI + + +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 610 HKQMVKSGQVPDVKSYEKLRS 630
+ G PDV Y + S
Sbjct: 528 FCSLSLKGVKPDVIIYNTMIS 548
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 145/310 (46%), Gaps = 36/310 (11%)
Query: 354 SNQLEEAEGLF-----------------------------------QEMKTKGLKPTSAT 378
S +L++A GLF ++M+ G+ T
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 379 FNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRM 438
+NIL++ + RR Q + LL ++ +G EP+ + + L++ Y +++SD A +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQM 181
Query: 439 KRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDT 498
+G +P + ++T LIH + +A A + M++ +P++ TY +++ + GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 499 GMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNML 558
+ + M + K+E V ++ ++D K +A ++ +E G++P ++TY+ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 559 MNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQ 618
++ + S +LL +M I P+ VT++ +I AFV+ A + +M+K
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 619 VPDVKSYEKL 628
PD+ +Y L
Sbjct: 362 DPDIFTYSSL 371
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 188/399 (47%), Gaps = 5/399 (1%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCS-IMITAMRKNGRSAKEAWE 292
+ V N +S L G+ D+A + ME+ + P+ V+ + +M+ R+ ++ A
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ--KNMDLARI 499
Query: 293 FFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYC 352
F + KG+K + L+ + AL + M I N +VY T+IN C
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 353 KSNQLEEAEGLFQEM-KTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNA 411
K Q +A L M + K L + ++N ++D + + + + E+ G+ PN
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 412 KSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFE 471
+YT L++ + +M D A + MK G+K +Y ALI + E A A F
Sbjct: 620 ITYTSLMNGLCKNNRM-DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 472 NMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQG 531
+L E + PS Y +L+ FR G+ + ++K M+ + + T+ L+DG K G
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Query: 532 QYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYS 591
+ A ++ +E +GL P + Y +++N + GQ K+ ++ +EM N+ P+ + Y+
Sbjct: 739 NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 592 TMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
+I R + AF H +M+ G +PD +++ L S
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 179/411 (43%), Gaps = 42/411 (10%)
Query: 188 EWMRLQEPSLVSPRACSVLFPVLGRARMGD-DLM-VLFKNLPQSKEFRDAHVYNAAISGL 245
E + E + P S +LG R + DL ++F N+ + + + Y+ I G
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 246 FWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLS 305
F +A + M ++N+ + V +I + K G+++K + K + +S
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 306 QEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQ 365
+++ F EG + A+ EM GI N I Y +L+N CK+N++++A +
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 366 EMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPR 425
EMK KG+K + L+D + +R E L EL + GL P+ Y LIS + R
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF---R 700
Query: 426 KMSDMAA--DAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIE 483
+ +M A D + +M + G+ + +
Sbjct: 701 NLGNMVAALDLYKKMLKDGL-----------------------------------RCDLG 725
Query: 484 TYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEF 543
TYT L+D + G+ + +++ M + + + + ++++G +K+GQ+++ + E
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 544 GKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMI 594
K + P ++ YN ++ + R G + +L EM I PD T+ ++
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 190/456 (41%), Gaps = 76/456 (16%)
Query: 238 YNAAISGLFWCGRYDDAWK-----------------------------------AYEAME 262
Y + I G DDA + ++ ME
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 263 ANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKG--------------------- 301
P+ VT S++I RKNG K A EF++KM G
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEK-ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 302 ---VKLSQE----------VVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLI 348
+KL E V ++ C +G +EA + +ME +GI N + YN ++
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 349 NAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLE 408
+C+ ++ A +F + KGLKP + T++IL+D R + +++ + +E
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 409 PNAKSYTCLISA---YGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEK 465
N Y +I+ G+ K ++ A+ + KR+ + + SY ++I + G +
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLAN-MIEEKRLCV--SCMSYNSIIDGFFKEGEMDS 602
Query: 466 AYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLD 525
A AA+E M I P++ TYT+L++ ++ +++ M ++ V+ + L+D
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 526 GFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKP 585
GF K+ A + SE + GL P+ YN L++ + G L K+M ++
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 586 DSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPD 621
D TY+T+I ++ + A + +M G VPD
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 174/395 (44%), Gaps = 34/395 (8%)
Query: 268 PDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALI 327
PD + S+ + A K A E +K SQE +++ + +G ++A+
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 328 IQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYS 387
++ EM GI N + +LI +CK+N L A LF +M+ +G P S TF++L++ +
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 388 RRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRK--------------------- 426
+ + E + +++ +GL P+ +I + + +K
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFV 445
Query: 427 ------------MSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENML 474
+D A + +M+ GI P SY ++ + + A F N+L
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505
Query: 475 REEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYL 534
+ +KP+ TY+ L+D R+ D +++ M S +E V + +++G K GQ
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 535 EARDVVSE-FGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+AR++++ + L + M+YN +++ + + G+ +EM I P+ +TY+++
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ + +A +M G D+ +Y L
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 146/332 (43%), Gaps = 3/332 (0%)
Query: 286 SAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYN 345
S EA E + +M GV LM++ E EAL + ++G ++++Y+
Sbjct: 213 SLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 346 TLINAYCKSNQLEEAEGLFQEMKTKGL-KPTSATFNILMDAYSRRMQPEIVEKLLLELQD 404
+ A CK+ L A L +EMK K L P+ T+ ++ A ++ + +L E+
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS 332
Query: 405 MGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHE 464
G+ N + T LI+ + + + A F +M++ G P S +++ LI + G E
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVS-ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 465 KAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILL 524
KA ++ M + PS+ ++ + + +K++ + V N +L
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NTIL 450
Query: 525 DGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIK 584
KQG+ EA +++S+ G+ P +++YN +M + R + + +K
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 585 PDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKS 616
P++ TYS +I R D + A M S
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSS 542
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 155/364 (42%), Gaps = 38/364 (10%)
Query: 301 GVKLSQEVVGALMKSFCDEGLKNEAL-IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEE 359
G +++ L+ ++ + + A+ I+ +E IP V TL +A + N L E
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL-SALVQRNSLTE 216
Query: 360 AEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLIS 419
A+ L+ M G+ + T +LM A R +P ++L + G EP++ Y+ +
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 420 AYGRPRKMSDMAADAFLRMKRVGI-KPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEI 478
A + ++ MA MK + P+ +YT++I A G + A + ML + I
Sbjct: 277 ACCKTLDLA-MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGI 335
Query: 479 KPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARD 538
++ T+L+ ++ D + ++ M E VTF++L++ F K G+ +A +
Sbjct: 336 SMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALE 395
Query: 539 VVSEFGKIGLQPTLMTYNMLMNAYGRG--------------------------------- 565
+ +GL P++ + ++ + +G
Sbjct: 396 FYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCK 455
Query: 566 -GQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKS 624
G+T + +LL +M + I P+ V+Y+ ++ R ++ A +++ G P+ +
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 625 YEKL 628
Y L
Sbjct: 516 YSIL 519
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
+YN+ ISG G A Y+ M + +R D T + +I + K+G A E + +
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL-ASELYTE 749
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
M G+ + + ++ +G + + + EM+K + N ++YN +I + +
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQP 392
L+EA L EM KG+ P ATF+IL+ +QP
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQP 845
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 121/291 (41%), Gaps = 37/291 (12%)
Query: 363 LFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYG 422
L K+ G + S FN L++AYS+ Q + ++ ++ ++ + P +SA
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 423 RPRKMSDMAADAFLRMKRVGI------------------KPTSHSYT------------A 452
+ +++ A + + RM +G+ KP +
Sbjct: 210 QRNSLTE-AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 453 LIHAYSVGGWHEKAYAAFENMLREEIK------PSIETYTALLDAFRRSGDTGMMMKIWK 506
L+++ +V + A N L E+K PS ETYT+++ A + G+ +++
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 507 LMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGG 566
M+S+ + V L+ G K + A + + K G P +T+++L+ + + G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 567 QTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSG 617
+ K + K+M L + P T+I +++ + + A + ++G
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 504 IWKLMMSEKVEGTRVT---FNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMN 560
+ KL+ S K G V FN LL+ ++K Q A D+V++ ++ + P N ++
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 561 AYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVP 620
A + ++ +L M + + D+VT ++ A +R A + ++ G P
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 621 DVKSY 625
D Y
Sbjct: 267 DSLLY 271
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 36/69 (52%)
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMR 281
+F+ + ++ + +YNA I+G + G D+A++ ++ M + PD T I+++
Sbjct: 781 MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQV 840
Query: 282 KNGRSAKEA 290
N + + A
Sbjct: 841 GNLQPVRAA 849
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 147/662 (22%), Positives = 269/662 (40%), Gaps = 95/662 (14%)
Query: 29 HLSQSLLHSKPIKAYIALSAITPTTFSTTHSSRQIFLPFL---QQQRQDPNPQNENHEED 85
HLSQ+ + P++ TP + + S + P +Q RQ+PN + +
Sbjct: 44 HLSQTTPNFSPLQ--------TPKSDFSGRQSTRFVSPATNNHRQTRQNPNYNHRPYGAS 95
Query: 86 EEEEAIDPLLKFFKSQTPTQ--DPPALGKLSLQKN--------RRSSWHLSP-------- 127
P + P Q PP L K+ RRS+ +S
Sbjct: 96 SSPRGSAPPPSSVATVAPAQLSQPPNFSPLQTPKSDLSSDFSGRRSTRFVSKMHFGRQKT 155
Query: 128 -----HVNSPNQSESDINDISLEDEAKQQ-MGSLPDGIGRVSKRECVQLLELMANDGLLG 181
H ++ + + D S +DE M S + +C ++ + N
Sbjct: 156 TMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESKL--CGSDDCTYIIRELGNRNECD 213
Query: 182 CCLYFYEW-MRLQEPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNA 240
+ FYE+ ++ + + S + LGR +F+ + ++A
Sbjct: 214 KAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 273
Query: 241 AISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRK 300
IS G +++A + +M+ +RP+ VT + +I A K G K+ +FF++M R
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 301 GVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEA 360
GV+ + +L+ GL A + EM + I + YNTL++A CK Q++ A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 361 EGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISA 420
+ +M K + P +++ ++D +++ + + L E++ +G+ + SY L+S
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 421 YGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKP 480
Y + + S+ A D M VGIK +Y AL+ Y G +++ F M RE + P
Sbjct: 454 YTKVGR-SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 481 SIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVV 540
++ TY+ L+D + + G M+I++ S + V ++ L+D K G A ++
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 541 SEFGKIGLQPTLMTYNMLMNA------------YGRGG---------------------- 566
E K G+ P ++TYN +++A Y GG
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQ 632
Query: 567 ----------------------QTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFK 604
+ S + ++ ++M L IKP+ VT+S ++ A R F+
Sbjct: 633 LFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFE 692
Query: 605 RA 606
A
Sbjct: 693 DA 694
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRR-MQPEI 394
G + ++ LI+AY +S EEA +F MK GL+P T+N ++DA + M+ +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 395 VEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALI 454
V K E+Q G++P+ ++ L++ R + + A + F M I+ SY L+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRG-GLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 455 HAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVE 514
A GG + A+ M + I P++ +Y+ ++D F ++G + ++ M +
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 515 GTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQL 574
RV++N LL + K G+ EA D++ E +G++ ++TYN L+ YG+ G+ ++ ++
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 575 LKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
EM ++ P+ +TYST+I + + +K A ++ +G DV Y L
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 151/312 (48%), Gaps = 3/312 (0%)
Query: 317 CDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTS 376
CD+ + ++ E K + + +I+ + ++ A+ +F+ G T
Sbjct: 212 CDKAVGFYEFAVKRERRKN---EQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTV 268
Query: 377 ATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFL 436
F+ L+ AY R E + +++ GL PN +Y +I A G+ A F
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 437 RMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSG 496
M+R G++P ++ +L+ S GG E A F+ M I+ + +Y LLDA + G
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 497 DTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYN 556
+ +I M +++ V+++ ++DGFAK G++ EA ++ E +G+ ++YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 557 MLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKS 616
L++ Y + G++ + +L+EMA++ IK D VTY+ ++ + + + +M +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 617 GQVPDVKSYEKL 628
+P++ +Y L
Sbjct: 509 HVLPNLLTYSTL 520
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 2/222 (0%)
Query: 411 AKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAF 470
K + +IS GR K++ +A F G T ++++ALI AY G HE+A + F
Sbjct: 233 GKLASAMISTLGRYGKVT-IAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 471 ENMLREEIKPSIETYTALLDAFRRSG-DTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAK 529
+M ++P++ TY A++DA + G + + K + M V+ R+TFN LL ++
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 530 QGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVT 589
G + AR++ E ++ + +YN L++A +GGQ ++L +M I P+ V+
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 590 YSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSI 631
YST+I F + F A +M G D SY L SI
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 28/188 (14%)
Query: 220 MVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITA 279
M +F+ + D +Y+A I L G A + M + P+ VT + +I A
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 280 MRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKS----------------------FC 317
++ + A + N + S + AL ++ C
Sbjct: 594 FGRSATMDRSA----DYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDC 649
Query: 318 DEGLKNEALIIQM--EMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPT 375
+EG++ + I+++ +M + I N + ++ ++NA + N E+A L +E++ K
Sbjct: 650 EEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVY 709
Query: 376 SATFNILM 383
+LM
Sbjct: 710 GVVHGLLM 717
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 183/395 (46%), Gaps = 2/395 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D YNA I+G R DDA + + M + + PD VT +IMI ++ G+ A +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK-LDLALKV 215
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++ + + L+++ EG +EAL + EM +G+ + YNT+I CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
++ A + + ++ KG +P ++NIL+ A + + E EKL+ ++ +PN +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y+ LI+ R K+ + A + MK G+ P ++SY LI A+ G + A E M
Sbjct: 336 YSILITTLCRDGKIEE-AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + P I Y +L ++G ++I+ + ++N + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+ A ++ E G+ P +TYN +++ R G + +LL +M + P VTY+ +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ F + + A + MV +G P+ +Y L
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 172/368 (46%), Gaps = 3/368 (0%)
Query: 228 QSKEFR-DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRS 286
+SK+F D YN I L G+ D A K + ++N +P +T +I+I A G
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG-G 243
Query: 287 AKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNT 346
EA + ++M +G+K +++ C EG+ + A + +E KG + I YN
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 347 LINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMG 406
L+ A + EE E L +M ++ P T++IL+ R + E LL +++ G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 407 LEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKA 466
L P+A SY LI+A+ R ++ D+A + M G P +Y ++ G ++A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRL-DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 467 YAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDG 526
F + P+ +Y + A SGD + + MMS ++ +T+N ++
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 527 FAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPD 586
++G EA +++ + P+++TYN+++ + + + +L+ M +P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Query: 587 SVTYSTMI 594
TY+ +I
Sbjct: 543 ETTYTVLI 550
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 16/365 (4%)
Query: 276 MITAMRKNGRSAK--EAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN--EALIIQME 331
M+ ++ RS E+ E M RKG + L+K F L+N +A+ +
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT--LRNIPKAVRVMEI 149
Query: 332 MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ 391
+EK G P + YN LIN +CK N++++A + M++K P + T+NI++ + R +
Sbjct: 150 LEKFGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 392 PEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLR----MKRVGIKPTS 447
++ K+L +L +P +YT LI A M + D L+ M G+KP
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEA-----TMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 448 HSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKL 507
+Y +I G ++A+ N+ + +P + +Y LL A G K+
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 508 MMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQ 567
M SEK + VT++IL+ + G+ EA +++ + GL P +Y+ L+ A+ R G+
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 568 TSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEK 627
+ L+ M + PD V Y+T++ + +A ++ + G P+ SY
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 628 LRSIL 632
+ S L
Sbjct: 444 MFSAL 448
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 165/386 (42%), Gaps = 7/386 (1%)
Query: 249 GRYDDAWKAYEAMEANNVRPDHVTCSIMITAM--RKNGRSAKEAWEFFEKMNRKGVKLSQ 306
G Y ++ E M PD + C+ +I +N A E EK + V
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF--- 159
Query: 307 EVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQE 366
AL+ FC ++A + M K + + YN +I + C +L+ A + +
Sbjct: 160 -AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 367 MKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRK 426
+ + +PT T+ IL++A + KL+ E+ GL+P+ +Y +I +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK-EG 277
Query: 427 MSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYT 486
M D A + ++ G +P SY L+ A G E+ M E+ P++ TY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 487 ALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKI 546
L+ R G M + KLM + + +++ L+ F ++G+ A + +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 547 GLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRA 606
G P ++ YN ++ + G+ + ++ ++ + P+S +Y+TM A D RA
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 607 FFYHKQMVKSGQVPDVKSYEKLRSIL 632
+M+ +G PD +Y + S L
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCL 483
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 2/282 (0%)
Query: 215 MGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCS 274
M D + +NL D YN + L G++++ K M + P+ VT S
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 275 IMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEK 334
I+IT + ++G+ +EA + M KG+ L+ +FC EG + A+ M
Sbjct: 338 ILITTLCRDGK-IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 335 KGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEI 394
G + + YNT++ CK+ + ++A +F ++ G P S+++N + A
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 395 VEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALI 454
++LE+ G++P+ +Y +IS R M D A + + M+ P+ +Y ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCR-EGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 455 HAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSG 496
+ E A E+M+ +P+ TYT L++ +G
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 194 EPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDD 253
+P++V+ S+L L R ++ M L K + + DA+ Y+ I+ GR D
Sbjct: 330 DPNVVTY---SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 254 AWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALM 313
A + E M ++ PD V + ++ + KNG+ A +A E F K+ G + +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGK-ADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 314 KSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLK 373
+ G K AL + +EM GI + I YN++I+ C+ ++EA L +M++
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 374 PTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYG 422
P+ T+NI++ + + + E +L + G PN +YT LI G
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 187/409 (45%), Gaps = 2/409 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD LF + QS+ + ++ + ++D Y ME + D + +I+
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + A KM + G + S +G+L+ FC EA+ + M+ G
Sbjct: 121 IHCFCR-CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
N ++YNT+IN CK+ L A +F M+ KG++ + T+N L+ S +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
+LL ++ ++PN +T LI + + + + A + + M R + P +Y +LI+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-ARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
+ + G A F+ M+ + P + TY L+ F +S MK++ M + + G
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
T+N L+ G+ + G+ A+ V + G+ P ++TYN+L++ G+ K +++
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
++ + D +TY+ +I R K A+ + + + G PD +Y
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 142/302 (47%), Gaps = 1/302 (0%)
Query: 331 EMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRM 390
+ME GI + + LI+ +C+ ++L A L +M G +P+ T L++ + +
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 163
Query: 391 QPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSY 450
+ + L+ + G PN Y +I+ + R +++ A + F M++ GI+ + +Y
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN-ALEVFYCMEKKGIRADAVTY 222
Query: 451 TALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMS 510
LI S G A +M++ +I P++ +TAL+D F + G+ ++K M+
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 511 EKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSK 570
V T+N L++GF G +A+ + G P ++TYN L+ + + +
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 571 LPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
+L EM + D+ TY+T+I+ + + A +MV G PD+ +Y L
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 631 IL 632
L
Sbjct: 403 CL 404
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 6/221 (2%)
Query: 178 GLLGCCLYFYEWMRLQE--PSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDA 235
G LG Y ++ M + P +V+ + L +++ +D M LF + DA
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTY---NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 236 HVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFE 295
YN I G G+ + A K + M V PD VT +I++ + NG+ K A E
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK-ALVMVE 418
Query: 296 KMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSN 355
+ + + + +++ C EA + + +KG+ +AI Y T+I+ C+
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
EA+ L + MK G P+ ++ + + + E+++
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIK 519
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%)
Query: 464 EKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNIL 523
+ A++ F ML+ PSI +T +L + +++ ++ M + + +F IL
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 524 LDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNI 583
+ F + + A ++ + K+G +P+++T L+N + +G + + L+ M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 584 KPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
P+ V Y+T+I + RD A M K G D +Y L S
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 200/440 (45%), Gaps = 5/440 (1%)
Query: 189 WMRLQEPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWC 248
W EP ++ F + GR + + L + + K+ D + I+GL
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVS---EAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 249 GRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEV 308
GR +A + M +PD VT ++ + K+G SA A + F KM + +K S
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL-ALDLFRKMEERNIKASVVQ 247
Query: 309 VGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMK 368
++ S C +G ++AL + EME KGI ++ + Y++LI C + ++ + +EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 369 TKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMS 428
+ + P TF+ L+D + + + ++L E+ G+ P+ +Y LI + + +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 429 DMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTAL 488
+ A F M G +P +Y+ LI++Y + F + + + P+ TY L
Sbjct: 368 E-ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 489 LDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGL 548
+ F +SG ++++ M+S V + VT+ ILLDG G+ +A ++ + K +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 549 QPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFF 608
+ YN++++ + L ++ +KPD VTY+ MI + A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 609 YHKQMVKSGQVPDVKSYEKL 628
++M + G PD +Y L
Sbjct: 547 LFRKMKEDGCTPDDFTYNIL 566
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 188/404 (46%), Gaps = 5/404 (1%)
Query: 193 QEPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYD 252
Q P LV+ + GR + +VL + + D Y ++ L G
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVS---EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 253 DAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGAL 312
A + ME N++ V SI+I ++ K+G S +A F +M KG+K +L
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDG-SFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 313 MKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGL 372
+ C++G ++ + EM + I + + ++ LI+ + K +L EA+ L+ EM T+G+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 373 KPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAA 432
P + T+N L+D + + ++ + G EP+ +Y+ LI++Y + +++ D
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD-GM 405
Query: 433 DAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAF 492
F + G+ P + +Y L+ + G A F+ M+ + PS+ TY LLD
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 493 RRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTL 552
+G+ ++I++ M ++ +NI++ G + +A + G++P +
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 553 MTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA 596
+TYN+++ + G S+ L ++M PD TY+ +I A
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 183/397 (46%), Gaps = 19/397 (4%)
Query: 208 PVLGR-ARMGDDLMVL--FKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEAN 264
PVL R + G+ + L F+ + + Y+ I L G +DDA + ME
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 265 NVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRK--GVKLSQEVV--GALMKSFCDEG 320
++ D VT S +I + +G+ W+ KM R+ G + +VV AL+ F EG
Sbjct: 275 GIKADVVTYSSLIGGLCNDGK-----WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Query: 321 LKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFN 380
EA + EM +GI + I YN+LI+ +CK N L EA +F M +KG +P T++
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 381 ILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKR 440
IL+++Y + + + +L E+ GL PN +Y L+ + + K+ + A + F M
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL-NAAKELFQEMVS 448
Query: 441 VGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGM 500
G+ P+ +Y L+ G KA FE M + + I Y ++ +
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD- 507
Query: 501 MMKIWKLMMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNM 557
W L S +G + VT+N+++ G K+G EA + + + G P TYN+
Sbjct: 508 --DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 558 LMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMI 594
L+ A+ G +L++EM DS T +I
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 189/410 (46%), Gaps = 4/410 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
+D + LF+++ QS+ +N S + +YD + ME N + D T +IM
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL-IIQMEMEKK 335
I + + A+ + + G + L+ FC EG +EA+ ++ +E K
Sbjct: 112 INCYCRK-KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIV 395
P + + +TLIN C ++ EA L M G +P T+ +++ + +
Sbjct: 171 QRP-DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIH 455
L ++++ ++ + Y+ +I + + D A F M+ GIK +Y++LI
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD-ALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 456 AYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG 515
G + M+ I P + T++AL+D F + G +++ M++ +
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 516 TRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLL 575
+T+N L+DGF K+ EA + G +P ++TY++L+N+Y + + +L
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 576 KEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
+E+++ + P+++TY+T++ F + A ++MV G P V +Y
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 59/284 (20%)
Query: 154 SLPDGIGRVSKRECV----QLLELMANDGLLGCCLYFYEWMRLQEPSLVSPRACSVLFPV 209
SL DG K C+ Q+ +LM + G EP +V+ S+L
Sbjct: 355 SLIDGF---CKENCLHEANQMFDLMVSKGC--------------EPDIVTY---SILINS 394
Query: 210 LGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPD 269
+A+ DD M LF+ + + YN + G G+ + A + ++ M + V P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 270 HVTCSIMITAMRKNGRSAK----------------------------------EAWEFFE 295
VT I++ + NG K +AW F
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 296 KMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSN 355
++ KGVK ++ C +G +EA ++ +M++ G + YN LI A+ +
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYS-RRMQPEIVEKL 398
L + L +EMK G S+T +++D S RR+ ++ L
Sbjct: 575 GLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 516 TRVTFNILLDGFAKQGQYLEARDVVSEFGK----IGLQPTLMTYNMLMNAYGRGGQTSKL 571
T + FN L A+ QY D+V F K G++ + T +++N Y R +
Sbjct: 69 TPIDFNRLCSAVARTKQY----DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 572 PQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSI 631
+L L +PD++T+ST++ F A +MV+ Q PD+ + L +
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 632 LDVK 635
L +K
Sbjct: 185 LCLK 188
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 203/419 (48%), Gaps = 3/419 (0%)
Query: 212 RARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHV 271
R+++ L VL K + E D ++ ++G R DA + M +PD
Sbjct: 131 RSQLSLALAVLAKMMKLGYE-PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 272 TCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQME 331
T + +I + + + A EA ++M ++G + G ++ C G + AL + +
Sbjct: 190 TFTTLIHGLFLHNK-ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 332 MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ 391
MEK I ++ ++YNT+I+ CK +++A LF EM KG++P T++ L+ +
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 392 PEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYT 451
+LL ++ + + PN +++ LI A+ + K+ + A + M + I P +Y+
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDEMIKRSIDPDIFTYS 367
Query: 452 ALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSE 511
+LI+ + + ++A FE M+ ++ P++ TY+ L+ F ++ M++++ M
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 512 KVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKL 571
+ G VT+ L+ GF + A+ V + +G+ P ++TYN+L++ + G+ +K
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 572 PQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
+ + + ++PD TY+ MI + + + + G P+V +Y + S
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 180/372 (48%), Gaps = 4/372 (1%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y ++GL G D A + ME + D V + +I + K + +A
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY-KHMDDALNL 280
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M+ KG++ +L+ C+ G ++A + +M ++ I N + ++ LI+A+ K
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L EAE L+ EM + + P T++ L++ + + + + + + PN +
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y+ LI + + +++ + + F M + G+ + +YT LIH + + A F+ M
Sbjct: 401 YSTLIKGFCKAKRVEE-GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + P+I TY LLD ++G M +++ + +E T+NI+++G K G+
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+ ++ G+ P ++ YN +++ + R G + LLK+M P+S TY+T+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 594 IYAFVRVRDFKR 605
I A R+RD R
Sbjct: 580 IRA--RLRDGDR 589
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 153/295 (51%), Gaps = 2/295 (0%)
Query: 335 KGIPSNAIV-YNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPE 393
K P +IV +N L++A K N+ E L ++M+T G+ T++I ++ + RR Q
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 394 IVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTAL 453
+ +L ++ +G EP+ + + L++ Y +++SD A +M +G KP + ++T L
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA-LVDQMVEMGYKPDTFTFTTL 194
Query: 454 IHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKV 513
IH + +A A + M++ +P + TY +++ + GD + + + K M K+
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 514 EGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQ 573
E V +N ++DG K +A ++ +E G++P + TY+ L++ G+ S +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 574 LLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
LL +M I P+ VT+S +I AFV+ A + +M+K PD+ +Y L
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 180/414 (43%), Gaps = 37/414 (8%)
Query: 250 RYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV 309
+ DDA + M + P V + +++A+ K + + E+M G+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNK-FELVISLGEQMQTLGISHDLYTY 121
Query: 310 GALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKT 369
+ FC + AL + +M K G + + ++L+N YC S ++ +A L +M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 370 KGLKPTSATFNILMDA-----------------YSRRMQPEIVE---------------- 396
G KP + TF L+ R QP++V
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 397 --KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALI 454
LL +++ +E + Y +I + + M D A + F M GI+P +Y++LI
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD-ALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 455 HAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVE 514
G A +M+ +I P++ T++AL+DAF + G K++ M+ ++
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 515 GTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQL 574
T++ L++GF + EA+ + P ++TY+ L+ + + + + +L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 575 LKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+EM+ + ++VTY+T+I+ F + RD A KQMV G P++ +Y L
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
S L +A+ ++ M LF+ + Q + Y I G F D+A ++ M +
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
V P+ +T +I++ + KNG+ AK A FE + R ++ +++ C G
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAK-AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 324 EALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM 383
+ + + KG+ N I YNT+I+ +C+ EEA+ L ++MK G P S T+N L+
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 384 DAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
A R E +L+ E++ G +A +
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 36/277 (12%)
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
++++A LF +M P+ FN L+ A ++ + E+V L ++Q +G+ + +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 416 CLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLR 475
I+ + R ++S +A +M ++G +P + ++L++ Y A A + M+
Sbjct: 123 IFINCFCRRSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 476 EEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLE 535
KP D F TF L+ G + E
Sbjct: 182 MGYKP---------DTF--------------------------TFTTLIHGLFLHNKASE 206
Query: 536 ARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIY 595
A +V + + G QP L+TY ++N + G LLK+M I+ D V Y+T+I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 596 AFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+ + A +M G PDV +Y L S L
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 36/163 (22%)
Query: 220 MVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITA 279
MV+F+ L +S D + YN I G+ G+ +D W+ + + V P+ + + MI+
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 280 MRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPS 339
+ G S+E +L+K +M++ G
Sbjct: 548 FCRKG--------------------SKEEADSLLK----------------KMKEDGPLP 571
Query: 340 NAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNIL 382
N+ YNTLI A + E + L +EM++ G ++T ++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 197/412 (47%), Gaps = 2/412 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF + QS+ F ++ +S + ++D E ME + + T +I+
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + A KM + G + + +L+ FC ++A+ + +M + G
Sbjct: 120 INCFCR-CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ + + TLI+ N+ EA L M +G +P T+ +++ +R ++
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ +E N Y+ +I + + R D A + F M+ G++P +Y++LI
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-ALNLFTEMENKGVRPNVITYSSLISC 297
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
G A +M+ +I P++ T++AL+DAF + G K+++ M+ ++
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
T++ L++GF + EA+ ++ + P ++TYN L+N + + + K +L +
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
EM+ + ++VTY+T+I+ F + RD A KQMV G P++ +Y L
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 185/376 (49%), Gaps = 2/376 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D N+ ++G R DA + M +PD VT + +I + + + A EA
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK-ASEAVAL 205
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
++M ++G + GA++ C G + AL + +ME I +N ++Y+T+I++ CK
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
++A LF EM+ KG++P T++ L+ + +LL ++ + + PN +
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
++ LI A+ + K+ A + M + I P +Y++LI+ + + +A E M
Sbjct: 326 FSALIDAFVKKGKLVK-AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+R++ P++ TY L++ F ++ M++++ M + G VT+ L+ GF +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
A+ V + +G+ P ++TYN+L++ + G+ +K + + + ++PD TY+ M
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 594 IYAFVRVRDFKRAFFY 609
I + +K Y
Sbjct: 505 IEGMCKAGKWKMGGIY 520
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 5/261 (1%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
S + L + R DD + LF + + Y++ IS L GR+ DA + M
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
+ P+ VT S +I A K G+ K A + +E+M ++ + + +L+ FC
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVK-AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 324 EA-LIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNIL 382
EA ++++ + K +P N + YNTLIN +CK+ ++++ LF+EM +GL + T+ L
Sbjct: 376 EAKQMLELMIRKDCLP-NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 383 MDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVG 442
+ + + + + + ++ +G+ PN +Y L+ + K++ A F ++R
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK-AMVVFEYLQRST 493
Query: 443 IKPTSHSYTALIHAYS-VGGW 462
++P ++Y +I G W
Sbjct: 494 MEPDIYTYNIMIEGMCKAGKW 514
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 1/224 (0%)
Query: 409 PNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYA 468
P+ ++ L+SA + K D+ +M+ +GI ++Y LI+ + A A
Sbjct: 76 PSIIEFSKLLSAIAKMNKF-DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134
Query: 469 AFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFA 528
M++ +P I T +LL+ F + + M+ + VTF L+ G
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 529 KQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSV 588
+ EA ++ + G QP L+TY ++N + G T LL +M I+ + V
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254
Query: 589 TYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
YST+I + + R A +M G P+V +Y L S L
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 186/395 (47%), Gaps = 2/395 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
YN I L G+ D A++ ++M+ + P+ T +IM+ + K+ + EA FE+M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS-QKLDEACAMFEEM 438
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
+ K + +L+ G ++A + +M +N+IVY +LI + +
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
E+ ++++M + P N MD + +PE + E++ P+A+SY+ L
Sbjct: 499 EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I + ++ + F MK G + +Y +I + G KAY E M +
Sbjct: 559 IHGLIKA-GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
+P++ TY +++D + +++ S+++E V ++ L+DGF K G+ EA
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
++ E + GL P L T+N L++A + + ++ + M L P+ VTY +I
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 598 VRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+VR F +AF + ++M K G P SY + S L
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 196/430 (45%), Gaps = 9/430 (2%)
Query: 206 LFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANN 265
+ VL +A D+ + +F++L +++ + YN I G G++D+A+ E A
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 266 VRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEA 325
P + + ++T +RK G+ EA + FE+M +K + L+ C G + A
Sbjct: 339 SIPSVIAYNCILTCLRKMGK-VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 326 LIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDA 385
++ M+K G+ N N +++ CKS +L+EA +F+EM K P TF L+D
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 386 YSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKP 445
+ + + K+ ++ D N+ YT LI + + D + M P
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED-GHKIYKDMINQNCSP 515
Query: 446 TSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIW 505
+ G EK A FE + P +Y+ L+ ++G + +
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG---FANETY 572
Query: 506 KLMMSEKVEGTRV---TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAY 562
+L S K +G + +NI++DGF K G+ +A ++ E G +PT++TY +++
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 563 GRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDV 622
+ + + L +E + I+ + V YS++I F +V A+ +++++ G P++
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 623 KSYEKLRSIL 632
++ L L
Sbjct: 693 YTWNSLLDAL 702
Score = 129 bits (324), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 193/425 (45%), Gaps = 2/425 (0%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
++L +L RA D L ++ ++ F + N + L + D+A +E M+
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
PD +T +I + K GR +A++ +EKM + + V +L+K+F + G K
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGR-VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 324 EALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM 383
+ I +M + + + NT ++ K+ + E+ +F+E+K + P + +++IL+
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 384 DAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGI 443
+ +L +++ G + ++Y +I + + K++ A MK G
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK-AYQLLEEMKTKGF 618
Query: 444 KPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMK 503
+PT +Y ++I + ++AY FE + I+ ++ Y++L+D F + G
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 504 IWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYG 563
I + +M + + T+N LLD K + EA ++ P +TY +L+N
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 564 RGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVK 623
+ + +K +EM +KP +++Y+TMI + + A + +G VPD
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 624 SYEKL 628
Y +
Sbjct: 799 CYNAM 803
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 181/394 (45%), Gaps = 2/394 (0%)
Query: 201 RACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEA 260
R +++ L +++ D+ +F+ + D + + I GL GR DDA+K YE
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEK 472
Query: 261 MEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEG 320
M ++ R + + + +I +GR ++ + ++ M + +++ M G
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRK-EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 321 LKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFN 380
+ + E++ + +A Y+ LI+ K+ E LF MK +G + +N
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 381 ILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKR 440
I++D + + + +LL E++ G EP +Y +I + ++ D A F K
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL-DEAYMLFEEAKS 650
Query: 441 VGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGM 500
I+ Y++LI + G ++AY E ++++ + P++ T+ +LLDA ++ +
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 501 MMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMN 560
+ ++ M K +VT+ IL++G K ++ +A E K G++P+ ++Y +++
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 561 AYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMI 594
+ G ++ L PDS Y+ MI
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 2/295 (0%)
Query: 201 RACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEA 260
R+ S+L L +A ++ LF ++ + D YN I G CG+ + A++ E
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 261 MEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEG 320
M+ P VT +I + K R EA+ FE+ K ++L+ + +L+ F G
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDR-LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 321 LKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFN 380
+EA +I E+ +KG+ N +N+L++A K+ ++ EA FQ MK P T+
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 381 ILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKR 440
IL++ + + E+Q G++P+ SYT +IS + +++ A F R K
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA-LFDRFKA 790
Query: 441 VGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRS 495
G P S Y A+I S G A++ FE R + +T LLD ++
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/438 (19%), Positives = 180/438 (41%), Gaps = 3/438 (0%)
Query: 186 FYEWMRLQEPSLVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGL 245
++ W + P + + L V+ R R D L + + + + + G
Sbjct: 84 YFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 246 FWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLS 305
+ + + + M RP + +I A S F++M G + +
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHS-DMMLTLFQQMQELGYEPT 202
Query: 306 QEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQ 365
+ L++ F EG + AL + EM+ + ++ ++YN I+++ K +++ A F
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 366 EMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPR 425
E++ GLKP T+ ++ + + + ++ L+ P +Y +I YG
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 426 KMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETY 485
K D A R + G P+ +Y ++ G ++A FE M +++ P++ TY
Sbjct: 323 KF-DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTY 380
Query: 486 TALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGK 545
L+D R+G ++ M + T NI++D K + EA + E
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 546 IGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKR 605
P +T+ L++ G+ G+ ++ ++M + + +S+ Y+++I F +
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 606 AFFYHKQMVKSGQVPDVK 623
+K M+ PD++
Sbjct: 501 GHKIYKDMINQNCSPDLQ 518
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 28/313 (8%)
Query: 383 MDAYSRRMQPEIVEKLLLELQDMG--------------LEPNAKSYTCLISAYGRPRKMS 428
+ A S + QPE V +L L+D+ L +SY L+ R R
Sbjct: 56 LSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFD 115
Query: 429 DMAADAFL-RMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTA 487
A D L M G P+ ++ ++ + Y + M + + +P+ YT
Sbjct: 116 --ALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTT 173
Query: 488 LLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIG 547
L+ AF + MM+ +++ M E T F L+ GFAK+G+ A ++ E
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 548 LQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAF 607
L ++ YN+ ++++G+ G+ + E+ +KPD VTY++MI + A
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 608 FYHKQMVKSGQVPDVKSYEKLRSILDVKVATK---------NRRDKSAILGIINSKMGMV 658
+ + K+ +VP +Y + I+ A K +R K +I +I +
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTM--IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 659 KAKKKGKKDEFWK 671
+K GK DE K
Sbjct: 352 CLRKMGKVDEALK 364
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 118/289 (40%), Gaps = 2/289 (0%)
Query: 344 YNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQ 403
YN+L+ + + + + EM G P+ T ++ + + ++ ++
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 404 DMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWH 463
P +YT LI A+ SDM F +M+ +G +PT H +T LI ++ G
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNH-SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 464 EKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNIL 523
+ A + + M + I Y +D+F + G M K + + + ++ VT+ +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 524 LDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNI 583
+ K + EA ++ K P YN ++ YG G+ + LL+
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 584 KPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
P + Y+ ++ ++ A ++M K P++ +Y L +L
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDML 387
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 154 SLPDGIGRVSK-RECVQLLELMANDGLLGCCLYFYEWMRLQEPSLVSPRACSVLFPVLGR 212
SL DG G+V + E +LE + GL Y W + L L +
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTP---NLYTW--------------NSLLDALVK 704
Query: 213 ARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVT 272
A ++ +V F+++ + K + Y I+GL +++ A+ ++ M+ ++P ++
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 273 CSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEM 332
+ MI+ + K G A EA F++ G A+++ + +A + E
Sbjct: 765 YTTMISGLAKAGNIA-EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 333 EKKGIPSNAIVYNTLINAYCKSNQLEEA 360
++G+P + L++ K++ LE+A
Sbjct: 824 RRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 7/400 (1%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
DA +N I GL R ++A K M PD +T ++ + K GR A +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDL 344
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKK-GIPSNAIVYNTLINAYC 352
F ++ + + + L+ F G ++A + +M GI + YN+LI Y
Sbjct: 345 FYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 353 KSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAK 412
K + A + +M+ KG KP ++ IL+D + + + + +L E+ GL+PN
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 413 SYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFEN 472
+ CLISA+ + ++ + A + F M R G KP +++ +LI + A +
Sbjct: 461 GFNCLISAFCKEHRIPE-AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 473 MLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQ 532
M+ E + + TY L++AF R G+ K+ M+ + +T+N L+ G + G+
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 533 YLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYST 592
+AR + + + G P+ ++ N+L+N R G + + KEM PD VT+++
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 593 MIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+I R + +++ G PD ++ L S L
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 191/413 (46%), Gaps = 7/413 (1%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
D + L +++ + ++ +Y I L C R ++A + E M PD T + +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + K R EA + +M +G G LM C G + A + + K
Sbjct: 294 ILGLCKFDR-INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTK-GLKPTSATFNILMDAYSRRMQPEIV 395
I +++NTLI+ + +L++A+ + +M T G+ P T+N L+ Y + +
Sbjct: 353 I----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIH 455
++L ++++ G +PN SYT L+ + + K+ D A + M G+KP + + LI
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI-DEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 456 AYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG 515
A+ +A F M R+ KP + T+ +L+ + + + + M+SE V
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 516 TRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLL 575
VT+N L++ F ++G+ EAR +V+E G +TYN L+ R G+ K L
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 576 KEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
++M P +++ + +I R + A + K+MV G PD+ ++ L
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 170/347 (48%), Gaps = 6/347 (1%)
Query: 283 NGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAI 342
+G K A F M + + + G +MK+FC + AL + +M K G N++
Sbjct: 194 SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSV 253
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLEL 402
+Y TLI++ K N++ EA L +EM G P + TFN ++ + + K++ +
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 403 QDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGW 462
G P+ +Y L++ + ++ D A D F R+ KP + LIH + G
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRV-DAAKDLFYRIP----KPEIVIFNTLIHGFVTHGR 368
Query: 463 HEKAYAAFENMLRE-EIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFN 521
+ A A +M+ I P + TY +L+ + + G G+ +++ M ++ + ++
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 522 ILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATL 581
IL+DGF K G+ EA +V++E GL+P + +N L++A+ + + + ++ +EM
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 582 NIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
KPD T++++I V + K A + + M+ G V + +Y L
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 10/402 (2%)
Query: 210 LGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEAN-NVRP 268
+GR DL F +P+ + ++N I G GR DDA M + + P
Sbjct: 335 IGRVDAAKDL---FYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 269 DHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALII 328
D T + +I K G A E M KG K + L+ FC G +EA +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGL-ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 329 QMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSR 388
EM G+ N + +N LI+A+CK +++ EA +F+EM KG KP TFN L+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 389 RMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSH 448
+ + LL ++ G+ N +Y LI+A+ R ++ + A M G
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE-ARKLVNEMVFQGSPLDEI 565
Query: 449 SYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLM 508
+Y +LI G +KA + FE MLR+ PS + L++ RSG ++ K M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 509 MSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQT 568
+ VTFN L++G + G+ + + + G+ P +T+N LM+ +GG
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 569 SKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYH 610
LL E P+ T+S ++ + + R FY+
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYN 727
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 148/358 (41%), Gaps = 8/358 (2%)
Query: 275 IMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEK 334
++I + NG K +M +G+ + + ++M+ + G + + +EM
Sbjct: 116 VLIGKLGANGE-FKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRN 174
Query: 335 K-GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPE 393
YN ++ N + A +F +M ++ + PT TF ++M A+ + +
Sbjct: 175 VYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 394 IVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTAL 453
LL ++ G PN+ Y LI + + ++++ A M +G P + ++ +
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE-ALQLLEEMFLMGCVPDAETFNDV 293
Query: 454 IHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKV 513
I +A ML P TY L++ + G ++ + ++
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 514 EGTRVTFNILLDGFAKQGQYLEARDVVSEF-GKIGLQPTLMTYNMLMNAYGRGGQTSKLP 572
V FN L+ GF G+ +A+ V+S+ G+ P + TYN L+ Y + G
Sbjct: 354 ----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 573 QLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
++L +M KP+ +Y+ ++ F ++ A+ +M G P+ + L S
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 37/269 (13%)
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLEL 402
VY LI + + + + L +MK +G+ + F +M Y + P +L+LE+
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 403 QDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGW 462
+++ Y+C +PT SY ++ G
Sbjct: 173 RNV--------YSC---------------------------EPTFKSYNVVLEILVSGNC 197
Query: 463 HEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNI 522
H+ A F +ML +I P++ T+ ++ AF + + + + M V +
Sbjct: 198 HKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQT 257
Query: 523 LLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLN 582
L+ +K + EA ++ E +G P T+N ++ + + ++ +++ M
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 583 IKPDSVTYSTMIYAFVRVR--DFKRAFFY 609
PD +TY ++ ++ D + FY
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 202/443 (45%), Gaps = 43/443 (9%)
Query: 239 NAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMN 298
N+ ++G R +A + M +PD VT + ++ + ++ + A EA E+M
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK-ASEAVALVERMV 207
Query: 299 RKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLE 358
KG + GA++ C G + AL + +MEK I ++ ++YNT+I+ CK ++
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 359 EAEGLFQEMKTKGLKPTSATFN-----------------ILMDAYSRRMQPEIV------ 395
+A LF +M+TKG+KP T+N +L D + + P++V
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 396 -----EKLLLELQDMGLE--------PNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVG 442
E L+E + + E P+ +Y LI + + +++ + + F M + G
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE-GMEVFREMSQRG 386
Query: 443 IKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMM 502
+ + +YT LIH + + A F+ M+ + + P I TY LLD +G+ +
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 503 KIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAY 562
+++ M ++ VT+ +++ K G+ + D+ G++P ++TY +M+ +
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Query: 563 GRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDV 622
R G + L EM P+S TY+T+I A +R D + K+M G D
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 623 KSYEKLRSILDVKVATKNRRDKS 645
++ + ++L R DKS
Sbjct: 567 STFGLVTNMLH-----DGRLDKS 584
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 184/413 (44%), Gaps = 3/413 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF ++ +S+ F ++ +S + ++D E M+ + + T SI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + + A KM + G S + +L+ FC +EA+ + +M + G
Sbjct: 117 INYFCRRSQLSL-ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ + + TL++ + N+ EA L + M KG +P T+ +++ +R +P++
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ +E + Y +I + + M D A D F +M+ GIKP +Y LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD-AFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEK-VEG 515
G A +ML + I P + + AL+DAF + G K++ M+ K
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 516 TRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLL 575
V +N L+ GF K + E +V E + GL +TY L++ + + +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 576 KEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
K+M + + PD +TY+ ++ + + A + M K D+ +Y +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 7/315 (2%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD LF + D YN IS L GR+ DA + M N+ PD V + +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV-GALMKSFCDEGLKNEALIIQMEMEKK 335
I A K G+ EA + +++M + V L+K FC E + + EM ++
Sbjct: 327 IDAFVKEGKLV-EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIV 395
G+ N + Y TLI+ + ++ + A+ +F++M + G+ P T+NIL+D E
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIH 455
+ +Q ++ + +YT +I A + K+ D D F + G+KP +YT ++
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED-GWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 456 AYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG 515
+ G E+A A F M + P+ TY L+ A R GD ++ K M S G
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 516 TRVTF----NILLDG 526
TF N+L DG
Sbjct: 565 DASTFGLVTNMLHDG 579
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 212 RARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHV 271
+AR D+ ++FK + D YN + GL G + A +E M+ +++ D V
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 272 TCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQME 331
T + MI A+ K G+ ++ W+ F ++ KGVK + +M FC +GLK EA + +E
Sbjct: 463 TYTTMIEALCKAGK-VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 332 MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNIL 382
M++ G N+ YNTLI A + + L +EM++ G ++TF ++
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 36/277 (12%)
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
+L++A GLF +M P+ F+ L+ A ++ + ++V L ++Q++G+ N +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 416 CLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLR 475
I+ + R ++S +A +M ++G P+ + +L++ + G +A A + M+
Sbjct: 115 IFINYFCRRSQLS-LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 476 EEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLE 535
+P DT VTF L+ G + + E
Sbjct: 174 MGYQP----------------DT-------------------VTFTTLVHGLFQHNKASE 198
Query: 536 ARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIY 595
A +V G QP L+TY ++N + G+ LL +M I+ D V Y+T+I
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 596 AFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+ + AF +M G PDV +Y L S L
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 194/399 (48%), Gaps = 2/399 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
+A Y ++ + G+ A + ME N++ D V SI+I + K+G S A+
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG-SLDNAFNL 285
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M KG+ + L+ FC+ G ++ + +M K+ I N + ++ LI+++ K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L EAE L +EM +G+ P + T+ L+D + + + +++ + G +PN ++
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
+ LI+ Y + ++ D + F +M G+ + +Y LI + G A F+ M
Sbjct: 406 FNILINGYCKANRIDD-GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ ++ P+I TY LLD +G++ ++I++ + K+E +NI++ G +
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
+A D+ G++P + TYN+++ + G S+ L ++M PD TY+ +
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
I A + D ++ +++ + G D + + + +L
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 191/413 (46%), Gaps = 2/413 (0%)
Query: 216 GDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSI 275
DD + LF+++ S+ ++ S + +YD + ME + + T SI
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 276 MITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKK 335
MI + R A+ K+ + G + + L+ C EG +EAL + M +
Sbjct: 129 MINCFCR-CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIV 395
G + I NTL+N C S + EA L +M G +P + T+ +++ + Q +
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIH 455
+LL ++++ ++ +A Y+ +I + + D A + F M+ GI +Y LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSL-DNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 456 AYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG 515
+ G + +M++ +I P++ T++ L+D+F + G ++ K M+ +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 516 TRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLL 575
+T+ L+DGF K+ +A +V G P + T+N+L+N Y + + +L
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 576 KEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
++M+ + D+VTY+T+I F + A ++MV P++ +Y+ L
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 189/422 (44%), Gaps = 2/422 (0%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
S LF + + + D ++ L K + + + + I+ C + A+ A +
Sbjct: 92 SRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK 151
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
P+ +T S +I + GR EA E ++M G K + L+ C G +
Sbjct: 152 LGYEPNTITFSTLINGLCLEGR-VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 324 EALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM 383
EA+++ +M + G NA+ Y ++N CKS Q A L ++M+ + +K + ++I++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 384 DAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGI 443
D + + L E++ G+ N +Y LI + + D A M + I
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD-GAKLLRDMIKRKI 329
Query: 444 KPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMK 503
P +++ LI ++ G +A + M+ I P TYT+L+D F + +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 504 IWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYG 563
+ LM+S+ + TFNIL++G+ K + + ++ + G+ +TYN L+ +
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 564 RGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVK 623
G+ + +L +EM + + P+ VTY ++ + ++A +++ KS D+
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 624 SY 625
Y
Sbjct: 510 IY 511
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 164/378 (43%), Gaps = 37/378 (9%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
D+ LF + + YN I G GR+DD K M + P+ VT S++
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + K G+ +EA E ++M +G+ +L+ FC E ++A + M KG
Sbjct: 340 IDSFVKEGK-LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
N +N LIN YCK+N++++ LF++M +G+ + T+N L+ + + + +
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
+L E+ + PN +Y L+ + S+ A + F ++++ ++ Y +IH
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGE-SEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
+ A+ F ++ + +KP ++TY
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTY------------------------------- 546
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
NI++ G K+G EA + + + G P TYN+L+ A+ G +K +L++
Sbjct: 547 ----NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 577 EMATLNIKPDSVTYSTMI 594
E+ D+ T +I
Sbjct: 603 ELKRCGFSVDASTIKMVI 620
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 201 RACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEA 260
R ++L +A DD + LF+ + D YN I G G+ + A + ++
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 261 MEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEG 320
M + V P+ VT I++ + NG S K A E FEK+ + ++L + ++ C+
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEK-ALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 321 LKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFN 380
++A + + KG+ YN +I CK L EAE LF++M+ G P T+N
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 381 ILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAY--GRPRK 426
IL+ A+ KL+ EL+ G +A + +I GR +K
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKK 630
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 79/169 (46%)
Query: 464 EKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNIL 523
+ A F +M+ P++ ++ L A ++ +++ + K M + + T +I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 524 LDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNI 583
++ F + + A + + K+G +P +T++ L+N G+ S+ +L+ M +
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 584 KPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
KPD +T +T++ A +MV+ G P+ +Y + +++
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 158/330 (47%), Gaps = 1/330 (0%)
Query: 288 KEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTL 347
+EA + F KM R V L+ F G ++ +M G YN +
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268
Query: 348 INAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGL 407
I+ CK +E A GLF+EMK +GL P + T+N ++D + + + + E++DM
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 408 EPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAY 467
EP+ +Y LI+ + + K+ + + + MK G+KP SY+ L+ A+ G ++A
Sbjct: 329 EPDVITYNALINCFCKFGKLP-IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 468 AAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGF 527
+ +M R + P+ TYT+L+DA + G+ ++ M+ VE VT+ L+DG
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 528 AKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDS 587
+ EA ++ + G+ P L +YN L++ + + + +LL E+ IKPD
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 588 VTYSTMIYAFVRVRDFKRAFFYHKQMVKSG 617
+ Y T I+ + + A +M + G
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 178/410 (43%), Gaps = 7/410 (1%)
Query: 224 KNLPQSKEFR----DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITA 279
+ L + +FR D YN+ I G GR DD +E M+ PD +T + +I
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 280 MRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPS 339
K G+ EF+ +M G+K + L+ +FC EG+ +A+ ++M + G+
Sbjct: 342 FCKFGK-LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 340 NAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLL 399
N Y +LI+A CK L +A L EM G++ T+ L+D + + E+L
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 400 LELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSV 459
++ G+ PN SY LI + + + M D A + +K GIKP Y I
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKAKNM-DRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 460 GGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVT 519
E A M IK + YT L+DA+ +SG+ + + M +E T VT
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 520 FNILLDGFAKQGQYLEARDVVSEFGK-IGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
F +L+DG K +A D + GLQ + +++ + Q L ++M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 579 ATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ PD Y++++ + + A +M + G D+ +Y L
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 187/444 (42%), Gaps = 33/444 (7%)
Query: 201 RACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEA 260
R+C+ L + DD+ FK++ + YN I + G + A +E
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 261 MEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEG 320
M+ + PD VT + MI K GR + FFE+M + AL+ FC G
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGR-LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 321 LKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFN 380
L EM+ G+ N + Y+TL++A+CK +++A + +M+ GL P T+
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 381 ILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKR 440
L+DA + +L E+ +G+E N +YT LI +M + A + F +M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE-AEELFGKMDT 465
Query: 441 VGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGM 500
G+ P SY ALIH + ++A + IKP + Y
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF------------ 513
Query: 501 MMKIWKLMMSEKVEGTRVTFN---------------ILLDGFAKQGQYLEARDVVSEFGK 545
IW L EK+E +V N L+D + K G E ++ E +
Sbjct: 514 ---IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Query: 546 IGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMAT-LNIKPDSVTYSTMIYAFVRVRDFK 604
+ ++ T++T+ +L++ + SK ++ ++ ++ ++ MI + +
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 605 RAFFYHKQMVKSGQVPDVKSYEKL 628
A +QMV+ G VPD +Y L
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSL 654
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 187/408 (45%), Gaps = 2/408 (0%)
Query: 206 LFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANN 265
LF VL M ++ + F + + + F N + G+ DD + ++ M
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 257
Query: 266 VRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEA 325
RP T +IMI M K G + A FE+M +G+ +++ F G ++
Sbjct: 258 ARPTVFTYNIMIDCMCKEG-DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 326 LIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDA 385
+ EM+ + I YN LIN +CK +L ++EMK GLKP +++ L+DA
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 386 YSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKP 445
+ + + K ++++ +GL PN +YT LI A + +SD A M +VG++
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD-AFRLGNEMLQVGVEW 435
Query: 446 TSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIW 505
+YTALI ++A F M + P++ +Y AL+ F ++ + +++
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 506 KLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRG 565
+ ++ + + + G + A+ V++E + G++ + Y LM+AY +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 566 GQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQM 613
G ++ LL EM L+I+ VT+ +I + + +A Y ++
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 180/415 (43%), Gaps = 38/415 (9%)
Query: 210 LGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPD 269
G+ DD + F+ + D YNA I+ G+ + Y M+ N ++P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 270 HVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQ 329
V+ S ++ A K G ++A +F+ M R G+ ++ +L+ + C G ++A +
Sbjct: 367 VVSYSTLVDAFCKEGM-MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 330 MEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRR 389
EM + G+ N + Y LI+ C + +++EAE LF +M T G+ P A++N L+ + +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 390 MQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHS 449
+ +LL EL+ G++P+ Y I K+ + A MK GIK S
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI-EAAKVVMNEMKECGIKANSLI 544
Query: 450 YTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAF--------------RRS 495
YT L+ AY G + + M +I+ ++ T+ L+D R S
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 496 GDTGMMMK----------------------IWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
D G+ +++ M+ + + R + L+DG KQG
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSV 588
LEA + + +IG++ L+ Y L+ Q K L+EM I PD V
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 149/318 (46%), Gaps = 1/318 (0%)
Query: 308 VVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEM 367
V AL D G+ EA+ +M++ + N L++ + K + ++ + F++M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 368 KTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKM 427
G +PT T+NI++D + E L E++ GL P+ +Y +I +G+ ++
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 428 SDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTA 487
D F MK + +P +Y ALI+ + G + M +KP++ +Y+
Sbjct: 314 DDTVC-FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 488 LLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIG 547
L+DAF + G +K + M + T+ L+D K G +A + +E ++G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 548 LQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAF 607
++ ++TY L++ + + +L +M T + P+ +Y+ +I+ FV+ ++ RA
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 608 FYHKQMVKSGQVPDVKSY 625
++ G PD+ Y
Sbjct: 493 ELLNELKGRGIKPDLLLY 510
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 1/286 (0%)
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLEL 402
V++ L + LEEA F +MK + P + + N L+ +++ + + V++ ++
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 403 QDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGW 462
G P +Y +I + + + A F MK G+ P + +Y ++I + G
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDV-EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 463 HEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNI 522
+ FE M +P + TY AL++ F + G + ++ ++ M ++ V+++
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 523 LLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLN 582
L+D F K+G +A + ++GL P TY L++A + G S +L EM +
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 583 IKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
++ + VTY+ +I K A +M +G +P++ SY L
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 185/396 (46%), Gaps = 2/396 (0%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
+Y+ + G ++ ++ P VT +I K G+ +K A E
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK-ALEVSRV 509
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
M +GVK + + ++ F A + +M K+G+ + I+YN +I+A+C
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
++ A +EM+ +PT+ TF ++ Y++ ++ ++ G P ++
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 417 LISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLRE 476
LI+ R+M + A + M G+ H+YT ++ Y+ G KA+ F + E
Sbjct: 630 LINGLVEKRQM-EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 477 EIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEA 536
+ I TY ALL A +SG + + K M + + +NIL+DG+A++G EA
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 537 RDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA 596
D++ + K G++P + TY ++A + G ++ Q ++EM L +KP+ TY+T+I
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 597 FVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+ R ++A +++M G PD Y L + L
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 168/347 (48%), Gaps = 7/347 (2%)
Query: 283 NGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAI 342
NG + + FEK++ K S+ G ++K + G + A M +GI +
Sbjct: 290 NGDNWQAVISAFEKIS----KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSR 345
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLEL 402
+Y +LI+AY ++EA ++MK +G++ + T+++++ +S+ E + E
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 403 QDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLR-MKRVGIKPTSHSYTALIHAYSVGG 461
+ + NA Y +I A+ + M A+A +R M+ GI Y ++ Y++
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNME--RAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 462 WHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFN 521
+K F+ + P++ TY L++ + + G +++ ++M E V+ T++
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 522 ILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATL 581
++++GF K + A V + K G++P ++ YN +++A+ G + Q +KEM L
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 582 NIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+P + T+ +I+ + + D +R+ M + G VP V ++ L
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 373 KPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAA 432
KP+ F +++ Y RR + ++ G+ P ++ YT LI AY R M D A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM-DEAL 364
Query: 433 DAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAF 492
+MK GI+ + +Y+ ++ +S G E A F+ R + Y ++ A
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424
Query: 493 RRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTL 552
++ + + + M E ++ ++ ++DG+ + V + G PT+
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 553 MTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQ 612
+TY L+N Y + G+ SK ++ + M +K + TYS MI FV+++D+ AF +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 613 MVKSGQVPDVKSYEKLRS 630
MVK G PDV Y + S
Sbjct: 545 MVKEGMKPDVILYNNIIS 562
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 209/466 (44%), Gaps = 34/466 (7%)
Query: 197 LVSPRACSVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWK 256
L S R C+++ VL +RM + +++ + + +N + F G + K
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 257 AYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSF 316
+ M+ N+ VT +I+I KNG+ +EA F M R G ++ L++ +
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGK-MEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 317 CDEGLKNEALIIQMEMEKKGI-PS------------------------------NAIVYN 345
C +GL ++A + EM GI P+ + + YN
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYN 378
Query: 346 TLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDM 405
TL++ Y K + EA LF +++ + P+ T+N L+D E ++L E+
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 438
Query: 406 GLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEK 465
+ P+ +YT L+ + + +S MA + + M R GIKP ++YT G +K
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLS-MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 466 AYAAFENML-REEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILL 524
A+ E M+ + P + Y +D + G+ ++ + + + VT+ ++
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 525 DGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIK 584
G+ + GQ+ AR++ E + L P+++TY +L+ + + G+ + Q EM ++
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 585 PDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
P+ +T++ ++Y + + A+ Y +M + G P+ SY L S
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 198/450 (44%), Gaps = 34/450 (7%)
Query: 257 AYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSF 316
++E M P C+I++ +R + R +A +E M G+ + ++ S
Sbjct: 190 SFEKMIRKGFLPSVRNCNIVLKVLR-DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSC 248
Query: 317 CDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTS 376
G I +EM+++ I + + YN LIN + K+ ++EEA +M+ G T
Sbjct: 249 FKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP 308
Query: 377 ATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT---CLISAYGRPRK----MSD 429
+FN L++ Y ++ + + E+ + G+ P +Y C + +GR +S
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 430 MAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALL 489
MAA P SY L+H Y G +A F+++ +I PSI TY L+
Sbjct: 369 MAA------------PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 490 DAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQ 549
D SG+ ++ + M ++ + +T+ L+ GF K G A +V E + G++
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 550 PTLMTYNMLMNAYGRGGQTSKLPQLLKEM-ATLNIKPDSVTYSTMIYAFVRVRDFKRAFF 608
P Y R G + K +L +EM AT + PD Y+ I +V + +A
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 609 YHKQMVKSGQVPDVKSYEK-LRSILD---VKVATKNRRD----KSAILGIINSKMGMVKA 660
+ +++ + G VPD +Y +R L+ K+A +N D K +I + +
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA-RNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 661 KKKGKKDEFWKY----KKRHPRTQSHAHNG 686
K G+ ++ ++Y KKR R HN
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 6/303 (1%)
Query: 324 EALIIQME-MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNIL 382
E ++ E M +KG + N ++ S + +A +++ M G+ PT TFN +
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244
Query: 383 MDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVG 442
+D+ + E V+K+ LE++ +E + +Y LI+ + + KM + A M+R G
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEE-ARRFHGDMRRSG 303
Query: 443 IKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMM 502
T +S+ LI Y G + A+ + ML I P+ TY + A G
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 503 KIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAY 562
++ M + V V++N L+ G+ K G+++EA + + + P+++TYN L++
Sbjct: 364 ELLSSMAAPDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 563 GRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDV 622
G +L +EM T I PD +TY+T++ FV+ + A + +M++ G PD
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 623 KSY 625
+Y
Sbjct: 480 YAY 482
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 163/396 (41%), Gaps = 48/396 (12%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
+N I G G +DDAW + M + P T +I I A+ GR +A E M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR-IDDARELLSSM 369
Query: 298 NRKGVKLSQEVV--GALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSN 355
+ +VV LM + G EA ++ ++ I + + YNTLI+ C+S
Sbjct: 370 A------APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
LE A+ L +EM T+ + P T+ L+ + + + ++ E+ G++P+ +YT
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 416 CLISAYGRPR------------------------KMSDMAADAFLRMK------------ 439
A G R + ++ D ++
Sbjct: 484 T--RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 440 -RVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDT 498
RVG+ P +YT +I Y G + A ++ MLR+ + PS+ TY L+ ++G
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601
Query: 499 GMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNML 558
+ M V +T N LL G K G EA + + + G+ P +Y ML
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 559 MNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMI 594
++ + ++ +L KEM I+PD T+ +
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 425 RKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIET 484
+ M++ +F +M R G P+ + ++ KA A +E M+ I P++ T
Sbjct: 181 KSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVIT 240
Query: 485 YTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFG 544
+ +LD+ ++GD + KIW M +E + VT+NIL++GF+K G+ EAR +
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 545 KIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA---FVRVR 601
+ G T ++N L+ Y + G + EM I P + TY+ I A F R+
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 602 DFKRAFFYHKQMVKSGQVPDVKSYEKL 628
D ++++ S PDV SY L
Sbjct: 361 D-------ARELLSSMAAPDVVSYNTL 380
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 228 QSKEFR-----DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRK 282
Q K FR D Y I G G++ A Y+ M + P +T ++I K
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 283 NGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAI 342
GR ++A+++ +M ++GV+ + AL+ C G +EA +ME++GIP N
Sbjct: 598 AGR-LEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 343 VYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM-----DAYSRRMQPEIVEK 397
Y LI+ C + EE L++EM K ++P T L D SR + E +E+
Sbjct: 657 SYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESR--EVEFLER 714
Query: 398 LLL 400
LLL
Sbjct: 715 LLL 717
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 197/413 (47%), Gaps = 4/413 (0%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF ++ +S+ F +N +S + +++ E M+ + D T SI
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + + A KM + G + + +L+ +C ++A+ + +M + G
Sbjct: 125 INCFCRRSQLSL-ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ + TLI+ N+ EA L +M +G +P T+ +++ +R ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ ++ N + +I + + R + ++A D F M+ GI+P +Y +LI+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHV-EVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
G A NML ++I P++ T+ AL+DAF + G K+ + M+ ++
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
+T+N+L++GF + EA+ + P + TYN L+N + + + +L +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVP-DVKSYEKL 628
EM+ + ++VTY+T+I F + D A KQMV S +VP D+ +Y L
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV-SNRVPTDIMTYSIL 474
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 196/412 (47%), Gaps = 10/412 (2%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D Y ++GL G D A MEA ++ + V + +I ++ K R + A +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY-RHVEVAVDL 280
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F +M KG++ + +L+ C+ G ++A + M +K I N + +N LI+A+ K
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+L EAE L +EM + + P + T+N+L++ + + + +++ + PN ++
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y LI+ + + +++ D + F M + G+ + +YT +I + G + A F+ M
Sbjct: 401 YNTLINGFCKCKRVED-GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ + I TY+ LL G + I+K + ++E +N +++G K G+
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
EA D+ F + ++P ++TYN +++ + L ++M P+S TY+T+
Sbjct: 520 GEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSILDVKVATKNRRDKS 645
I A +R D + K+M SG V D + + ++L R DKS
Sbjct: 577 IRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH-----DGRLDKS 623
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 203/452 (44%), Gaps = 41/452 (9%)
Query: 212 RARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHV 271
R+++ L VL K + E D ++ ++G R DA + M +PD
Sbjct: 131 RSQLSLALAVLAKMMKLGYE-PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 272 TCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQME 331
T + +I + + + A EA ++M ++G + G ++ C G + AL + +
Sbjct: 190 TFTTLIHGLFLHNK-ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 332 MEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQ 391
ME I +N +++NT+I++ CK +E A LF EM+TKG++P T+N L++ +
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 392 PEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYT 451
+LL + + + PN ++ LI A+ + K+ + A M + I P + +Y
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE-AEKLHEEMIQRSIDPDTITYN 367
Query: 452 ALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRR----------------- 494
LI+ + + ++A F+ M+ ++ P+I+TY L++ F +
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 495 ------------------SGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEA 536
+GD ++K M+S +V +T++ILL G G+ A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 537 RDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA 596
+ K ++ + YN ++ + G+ + L +L+IKPD VTY+TMI
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISG 544
Query: 597 FVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
R + A ++M + G +P+ +Y L
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 177/385 (45%), Gaps = 7/385 (1%)
Query: 209 VLGRARMGD-DLMV-LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNV 266
V G + GD DL + L + ++ + ++N I L + A + ME +
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 267 RPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL 326
RP+ VT + +I + GR + +A M K + + AL+ +F EG EA
Sbjct: 290 RPNVVTYNSLINCLCNYGRWS-DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 327 IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY 386
+ EM ++ I + I YN LIN +C N+L+EA+ +F+ M +K P T+N L++ +
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 387 SRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPT 446
+ + E +L E+ GL N +YT +I + + D A F +M +
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD-CDSAQMVFKQMVSNRVPTD 467
Query: 447 SHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWK 506
+Y+ L+H G + A F+ + + E++ +I Y +++ ++G G + W
Sbjct: 468 IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG---EAWD 524
Query: 507 LMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGG 566
L S ++ VT+N ++ G + EA D+ + + G P TYN L+ A R
Sbjct: 525 LFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDC 584
Query: 567 QTSKLPQLLKEMATLNIKPDSVTYS 591
+ +L+KEM + D+ T S
Sbjct: 585 DRAASAELIKEMRSSGFVGDASTIS 609
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 356 QLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYT 415
++++A LF +M P+ FN L+ A ++ + E+V L ++Q +G+ + +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 416 CLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLR 475
I+ + R ++S +A +M ++G +P + ++L++ Y A A + M+
Sbjct: 123 IFINCFCRRSQLS-LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 476 EEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLE 535
KP D F TF L+ G + E
Sbjct: 182 MGYKP---------DTF--------------------------TFTTLIHGLFLHNKASE 206
Query: 536 ARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIY 595
A +V + + G QP L+TY ++N + G LL +M IK + V ++T+I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 596 AFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRSIL 632
+ + R + A +M G P+V +Y L + L
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 204/451 (45%), Gaps = 12/451 (2%)
Query: 189 WMRLQEPSLVSPRACSVLFPVLGRARMG--DDLMVLFKNLPQSKEFRDAHVYNAAISGLF 246
W RL E S V P + + G ++ G DD + +++ + Q++ +D + Y++ I GL
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 247 WCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQ 306
G D A + ++ D VT + M+ + G+ KE+ E + M K S
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK-IKESLELWRIMEHKN---SV 357
Query: 307 EVV--GALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLF 364
+V L+K + G +EA +I M KG ++ Y I+ C + + +A G+
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 365 QEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRP 424
QE+++ G + ++D ++ + E L+ E+ G+E N+ LI R
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 425 RKMSDMAADAFLR-MKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIE 483
++ + A FLR M + G +PT SY LI G +A A + ML KP ++
Sbjct: 478 SRLGE--ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 484 TYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEF 543
TY+ LL R + +++W + +E + NIL+ G G+ +A V++
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 544 GKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDF 603
L+TYN LM + + G +++ + M + ++PD ++Y+T++ R
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 604 KRAFFYHKQMVKSGQVPDVKSYEKL-RSILD 633
A + G P V ++ L R++++
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 186/456 (40%), Gaps = 26/456 (5%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTC-SIMITAM--RKNGRSAKEA 290
D Y+ I+ L G+ DDA + ++ M V PD VTC +I+I K+ ++A E
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD-VTCYNILIDGFLKEKDHKTAMEL 241
Query: 291 WEFF--EKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLI 348
W+ + VK ++ L K G ++ L I M++ + Y++LI
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKC----GRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 349 NAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKL-LLELQDMGL 407
+ C + +++AE +F E+ + T+N ++ + R +I E L L + +
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR--CGKIKESLELWRIMEHKN 355
Query: 408 EPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAY 467
N SY LI K+ D A + M G +Y IH V G+ KA
Sbjct: 356 SVNIVSYNILIKGLLENGKI-DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 468 AAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGF 527
+ + + Y +++D + + K M VE N L+ G
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 528 AKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDS 587
+ + EA + E GK G +PT+++YN+L+ + G+ + +KEM KPD
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 588 VTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVK----------SYEKLRSILDVKVA 637
TYS ++ R R A Q ++SG DV S KL + V +A
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV-MA 593
Query: 638 TKNRRDKSAILGIINSKM-GMVKAKKKGKKDEFWKY 672
R+ +A L N+ M G K + W Y
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGY 629
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 151/333 (45%), Gaps = 4/333 (1%)
Query: 295 EKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEM-EKKGIPSNAIVYNTLINAYCK 353
E + + K ++V +++K++ + ++AL + M E G YNTL+NA+ +
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ Q + E LF +T G+ P T+N+L+ ++ + E L + G +P+ S
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y+ +I+ + K+ D A + F M G+ P Y LI + H+ A ++ +
Sbjct: 187 YSTVINDLAKAGKLDD-ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 474 LRE-EIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQ 532
L + + P+++T+ ++ + G +KIW+ M + E T++ L+ G G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 533 YLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYST 592
+A V +E + ++TYN ++ + R G+ + +L + M N + V+Y+
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNI 364
Query: 593 MIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
+I + A + M G D +Y
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 154/356 (43%), Gaps = 7/356 (1%)
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRK-GVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKK 335
+ + K+ ++ + A+ F+ R G S V +++ + + N I + +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMK-TKGLKPTSATFNILMDAYSRRMQPEI 394
+ V ++I Y K++ ++A +F+ M+ G +P ++N L++A+ Q
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVK 132
Query: 395 VEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLR-MKRVGIKPTSHSYTAL 453
VE L + G+ PN ++Y LI + ++ A FL M + G KP SY+ +
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFE--KARGFLDWMWKEGFKPDVFSYSTV 190
Query: 454 IHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIW-KLMMSEK 512
I+ + G + A F+ M + P + Y L+D F + D M++W +L+
Sbjct: 191 INDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSS 250
Query: 513 VEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLP 572
V T NI++ G +K G+ + + + + L TY+ L++ G K
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 573 QLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ E+ D VTY+TM+ F R K + + M V ++ SY L
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNIL 365
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 68/186 (36%), Gaps = 36/186 (19%)
Query: 204 SVLFPVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEA 263
S+L L R R D + L+ QS D ++N I GL G+ DDA ME
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 264 NNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKN 323
N + VT LM+ F G N
Sbjct: 598 RNCTANLVT------------------------------------YNTLMEGFFKVGDSN 621
Query: 324 EALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILM 383
A +I M K G+ + I YNT++ C + A F + + G+ PT T+NIL+
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Query: 384 DAYSRR 389
A R
Sbjct: 682 RAVVNR 687
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 205/430 (47%), Gaps = 6/430 (1%)
Query: 210 LGRARMGD----DLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANN 265
L + R+ D D + LF ++ +S+ F +N +S + +YD + ME
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 266 VRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEA 325
+R D T +I+I + A KM + G + + +G+L+ FC ++A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQ-VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 326 LIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDA 385
+ + +M + G + + YN +I++ CK+ ++ +A F+E++ KG++P T+ L++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 386 YSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKP 445
+ +LL ++ + PN +Y+ L+ A+ + K+ + A + F M R+ I P
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE-AKELFEEMVRMSIDP 293
Query: 446 TSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIW 505
+Y++LI+ + ++A F+ M+ + + +Y L++ F ++ MK++
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 506 KLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRG 565
+ M + VT+N L+ GF + G +A++ S+ G+ P + TYN+L+
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 566 GQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSY 625
G+ K + ++M + D VTY+T+I + + A+ + G PD+ +Y
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 626 EKLRSILDVK 635
+ S L K
Sbjct: 474 TTMMSGLCTK 483
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 165/358 (46%), Gaps = 2/358 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D + ++G R DA + M +PD V + +I ++ K R +A++F
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDF 212
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
F+++ RKG++ + AL+ C+ ++A + +M KK I N I Y+ L++A+ K
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ ++ EA+ LF+EM + P T++ L++ + + ++ + G + S
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y LI+ + + +++ D F M + G+ + +Y LI + G +KA F M
Sbjct: 333 YNTLINGFCKAKRVED-GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
I P I TY LL +G+ + I++ M +++ VT+ ++ G K G+
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYS 591
EA + GL+P ++TY +M+ G ++ L +M + + T S
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 183/441 (41%), Gaps = 69/441 (15%)
Query: 149 KQQMGSLPDGIGRVSK-RECVQLLELMANDGLLGCCLYFYEWMRLQEPSLVSPRACSVLF 207
+ +GSL +G R ++ + V L++ M G +P +V+ A +
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG--------------YKPDIVAYNA---II 197
Query: 208 PVLGRARMGDDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVR 267
L + + +D FK + + + Y A ++GL R+ DA + M +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 268 PDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALI 327
P+ +T S ++ A KNG+ EA E FE+M R + +L+ C +EA
Sbjct: 258 PNVITYSALLDAFVKNGK-VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 328 IQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYS 387
+ M KG ++ + YNTLIN +CK+ ++E+ LF+EM +GL + T+N L+ +
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF- 375
Query: 388 RRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTS 447
Q V+K A + F +M GI P
Sbjct: 376 --FQAGDVDK---------------------------------AQEFFSQMDFFGISPDI 400
Query: 448 HSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKL 507
+Y L+ G EKA FE+M + E+ I TYT ++ R TG + + W L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI---RGMCKTGKVEEAWSL 457
Query: 508 MMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGR 564
S ++G + VT+ ++ G +G E + ++ + GL T +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS-------- 509
Query: 565 GGQTSKLPQLLKEMATLNIKP 585
G + +L+K+M + P
Sbjct: 510 DGDITLSAELIKKMLSCGYAP 530
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 189/414 (45%), Gaps = 37/414 (8%)
Query: 250 RYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV 309
R DA + M RPD +T + +I + + + A EA ++M ++G + +
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVALVDRMVQRGCQPNLVTY 153
Query: 310 GALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKT 369
G ++ C G + A + +ME I ++ +++NT+I++ CK +++A LF+EM+T
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 370 KGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSD 429
KG++P T++ L+ + +LL ++ + + PN ++ LI A+ + K +
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 430 MAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALL 489
A M + I P +Y +LI+ + + +KA FE M+ ++ P ++TY L+
Sbjct: 274 -AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 490 DAFRRS-----------------------------------GDTGMMMKIWKLMMSEKVE 514
F +S GD K++K M+S+ V
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 515 GTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQL 574
+T++ILLDG G+ +A +V K ++ + Y ++ + G+ L
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 575 LKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
++ +KP+ VTY+TMI R + A+ K+M + G +PD +Y L
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 182/388 (46%), Gaps = 14/388 (3%)
Query: 209 VLGRARMGD-DLMV-LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNV 266
V G + GD DL L + +K D ++N I L DDA ++ ME +
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 267 RPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL 326
RP+ VT S +I+ + GR + +A + M K + + AL+ +F EG EA
Sbjct: 217 RPNVVTYSSLISCLCSYGRWS-DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 327 IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY 386
+ +M K+ I + YN+LIN +C ++L++A+ +F+ M +K P T+N L+ +
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 387 SRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPT 446
+ + E +L E+ GL + +YT LI D A F +M G+ P
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD-CDNAQKVFKQMVSDGVPPD 394
Query: 447 SHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSG--DTGMMMKI 504
+Y+ L+ G EKA F+ M + EIK I YT +++ ++G D G
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG----- 449
Query: 505 WKLMMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNA 561
W L S ++G + VT+N ++ G + EA ++ + + G P TYN L+ A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 562 YGRGGQTSKLPQLLKEMATLNIKPDSVT 589
+ R G + +L++EM + D+ T
Sbjct: 510 HLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 172/365 (47%), Gaps = 2/365 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
Y ++GL G D A+ MEA + D V + +I ++ K R +A F++M
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY-RHVDDALNLFKEM 211
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
KG++ + +L+ C G ++A + +M +K I N + +N LI+A+ K +
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
EAE L +M + + P T+N L++ + + + +++ + P+ +Y L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I + + +++ D + F M G+ + +YT LI G + A F+ M+ +
Sbjct: 332 IKGFCKSKRVED-GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
+ P I TY+ LLD +G ++++ M +++ + +++G K G+ +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
D+ G++P ++TYN +++ + LLK+M PDS TY+T+I A
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 598 VRVRD 602
+R D
Sbjct: 511 LRDGD 515
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 146/285 (51%), Gaps = 1/285 (0%)
Query: 344 YNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQ 403
+N L++A K + + L ++M+ G+ T+NIL++ + RR Q + LL ++
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 404 DMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWH 463
+G EP+ + + L++ Y +++SD A +M +G +P + ++T LIH +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 464 EKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNIL 523
+A A + M++ +P++ TY +++ + GD + + M + K+E V FN +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 524 LDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNI 583
+D K +A ++ E G++P ++TY+ L++ G+ S QLL +M I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 584 KPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
P+ VT++ +I AFV+ F A H M+K PD+ +Y L
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 205/462 (44%), Gaps = 23/462 (4%)
Query: 220 MVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITA 279
MV + LP EF N +S + ++D E M+ + + T +I+I
Sbjct: 1 MVKSRPLPSIFEF------NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINC 54
Query: 280 MRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPS 339
+ + + A KM + G + S + +L+ +C ++A+ + +M + G
Sbjct: 55 FCRRSQISL-ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 340 NAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLL 399
+ I + TLI+ N+ EA L M +G +P T+ ++++ +R ++ LL
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 400 LELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAY-S 458
+++ +E + + +I + + R + D A + F M+ GI+P +Y++LI S
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 459 VGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRV 518
G W + A +M+ ++I P++ T+ AL+DAF + G K+ M+ ++
Sbjct: 233 YGRWSD-ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 519 TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
T+N L++GF + +A+ + P L TYN L+ + + + +L +EM
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 579 ATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYE----------KL 628
+ + D+VTY+T+I D A KQMV G PD+ +Y KL
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 629 RSILDVKVATKNRRDKSAILGIINSKMGMVKAKKKGKKDEFW 670
L+V + K I GM KA GK D+ W
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA---GKVDDGW 450
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 6/293 (2%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
+NA I G++ +A K ++ M ++ PD T + +I + R K A + FE M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK-AKQMFEFM 316
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
K + L+K FC + + EM +G+ + + Y TLI
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
+ A+ +F++M + G+ P T++IL+D + E ++ +Q ++ + YT +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I + K+ D D F + G+KP +Y +I ++AYA + M +
Sbjct: 437 IEGMCKAGKVDD-GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTF----NILLDG 526
P TY L+ A R GD ++ + M S + G T N+L DG
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 190/414 (45%), Gaps = 37/414 (8%)
Query: 250 RYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV 309
R DA + M RPD +T + +I + + + A EA ++M ++G + +
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVALVDRMVQRGCQPNLVTY 228
Query: 310 GALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKT 369
G ++ C G + AL + +ME I ++ +++NT+I++ CK +++A LF+EM+T
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 370 KGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSD 429
KG++P T++ L+ + +LL ++ + + PN ++ LI A+ + K +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 430 MAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALL 489
A + M + I P +Y +L++ + + +KA FE M+ ++ P + TY L+
Sbjct: 349 -AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 490 DAFRRS-----------------------------------GDTGMMMKIWKLMMSEKVE 514
F +S GD K++K M+S+ V
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 515 GTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQL 574
+T++ILLDG G+ +A +V K ++ + Y ++ + G+ L
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 575 LKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
++ +KP+ VTY+TMI R + A+ K+M + G +P+ +Y L
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 183/388 (47%), Gaps = 14/388 (3%)
Query: 209 VLGRARMGD-DLMV-LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNV 266
V G + GD DL + L + +K D ++N I L DDA ++ ME +
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 267 RPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEAL 326
RP+ VT S +I+ + GR + +A + M K + + AL+ +F EG EA
Sbjct: 292 RPNVVTYSSLISCLCSYGRWS-DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 327 IIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAY 386
+ +M K+ I + YN+L+N +C ++L++A+ +F+ M +K P T+N L+ +
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 387 SRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPT 446
+ + E +L E+ GL + +YT LI D A F +M G+ P
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD-CDNAQKVFKQMVSDGVPPD 469
Query: 447 SHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSG--DTGMMMKI 504
+Y+ L+ G EKA F+ M + EIK I YT +++ ++G D G
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG----- 524
Query: 505 WKLMMSEKVEGTR---VTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNA 561
W L S ++G + VT+N ++ G + EA ++ + + G P TYN L+ A
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 562 YGRGGQTSKLPQLLKEMATLNIKPDSVT 589
+ R G + +L++EM + D+ T
Sbjct: 585 HLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 206/464 (44%), Gaps = 15/464 (3%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD + LF + +S+ +N +S + ++D E M+ + T +I+
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKG 336
I + + + A KM + G + S + +L+ +C ++A+ + +M + G
Sbjct: 127 INCFCRRSQISL-ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ I + TLI+ N+ EA L M +G +P T+ ++++ +R ++
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
LL +++ +E + + +I + + R + D A + F M+ GI+P +Y++LI
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD-ALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 457 YSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGT 516
G A +M+ ++I P++ T+ AL+DAF + G K++ M+ ++
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 517 RVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLK 576
T+N L++GF + +A+ + P ++TYN L+ + + + +L +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 577 EMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYE---------- 626
EM+ + D+VTY+T+I D A KQMV G PD+ +Y
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 627 KLRSILDVKVATKNRRDKSAILGIINSKMGMVKAKKKGKKDEFW 670
KL L+V + K I GM KA GK D+ W
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA---GKVDDGW 525
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 172/365 (47%), Gaps = 2/365 (0%)
Query: 238 YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKM 297
Y ++GL G D A MEA + D V + +I ++ K R +A F++M
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY-RHVDDALNLFKEM 286
Query: 298 NRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQL 357
KG++ + +L+ C G ++A + +M +K I N + +N LI+A+ K +
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 358 EEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCL 417
EAE L+ +M + + P T+N L++ + + + +++ + P+ +Y L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 418 ISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREE 477
I + + +++ D + F M G+ + +YT LI G + A F+ M+ +
Sbjct: 407 IKGFCKSKRVED-GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 478 IKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEAR 537
+ P I TY+ LLD +G ++++ M +++ + +++G K G+ +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 538 DVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAF 597
D+ G++P ++TYN +++ + LLK+M P+S TY+T+I A
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 598 VRVRD 602
+R D
Sbjct: 586 LRDGD 590
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 36/308 (11%)
Query: 356 QLEEAEGLFQEM-KTKGL-------KPTSA---------------------------TFN 380
+L++A GLF M K++ L K SA T+N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 381 ILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKR 440
IL++ + RR Q + LL ++ +G EP+ + + L++ Y +++SD A +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-LVDQMVE 183
Query: 441 VGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGM 500
+G +P + ++T LIH + +A A + M++ +P++ TY +++ + GDT +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 501 MMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMN 560
+ + M + K+E V FN ++D K +A ++ E G++P ++TY+ L++
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 561 AYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVP 620
G+ S QLL +M I P+ VT++ +I AFV+ F A + M+K P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 621 DVKSYEKL 628
D+ +Y L
Sbjct: 364 DIFTYNSL 371
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 43/357 (12%)
Query: 210 LGRARMGDDLMVLFKNLPQSKEFR-DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRP 268
L + R DD + LFK + ++K R + Y++ IS L GR+ DA + M + P
Sbjct: 270 LCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 269 DHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFC-DEGLKNEALI 327
+ VT + +I A K G+ EA + ++ M ++ + +L+ FC + L +
Sbjct: 329 NLVTFNALIDAFVKEGKFV-EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 328 IQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYS 387
+ + K P + + YNTLI +CKS ++E+ LF+EM +GL + T+ L+
Sbjct: 388 FEFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 388 RRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMS------------------- 428
+ +K+ ++ G+ P+ +Y+ L+ K+
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 429 ---------------DMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
D D F + G+KP +Y +I ++AYA + M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTF----NILLDG 526
+ P+ TY L+ A R GD ++ + M S + G T N+L DG
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 191/463 (41%), Gaps = 84/463 (18%)
Query: 236 HV-YNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFF 294
HV +NA I G G + +A K + MEA + P V+ +++ + KN A F+
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE-FDLARGFY 391
Query: 295 EKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKS 354
+M R GV + + ++ C G +EA+++ EM K GI + + Y+ LIN +CK
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451
Query: 355 NQLEEAEGLFQEMKTKGLKPTSA-----------------------------------TF 379
+ + A+ + + GL P TF
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511
Query: 380 NILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMK 439
N+L+ + + + E+ + + G+ PN S+ CLI+ YG + A F M
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE-GLKAFSVFDEMT 570
Query: 440 RVGIKPTSHSYTALIHAYSVGG-----------WHE------------------------ 464
+VG PT +Y +L+ GG H
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 465 KAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG------TRV 518
KA + F M++ I P TYT+L+ R G T + ++ +++ E +V
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT-----VIAILFAKEAEARGNVLPNKV 685
Query: 519 TFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEM 578
+ +DG K GQ+ + +G P ++T N +++ Y R G+ K LL EM
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 579 ATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPD 621
N P+ TY+ +++ + + +D +F ++ ++ +G +PD
Sbjct: 746 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 177/397 (44%), Gaps = 2/397 (0%)
Query: 234 DAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEF 293
D YN I L R + M + P+ VT + +I G+ A +
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK-VLIASQL 320
Query: 294 FEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK 353
+M G+ + AL+ EG EAL + ME KG+ + + Y L++ CK
Sbjct: 321 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 380
Query: 354 SNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKS 413
+ + + A G + MK G+ T+ ++D + + LL E+ G++P+ +
Sbjct: 381 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 440
Query: 414 YTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENM 473
Y+ LI+ + + + A + R+ RVG+ P Y+ LI+ G ++A +E M
Sbjct: 441 YSALINGFCKVGRFKT-AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499
Query: 474 LREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQY 533
+ E T+ L+ + ++G + + M S+ + V+F+ L++G+ G+
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559
Query: 534 LEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTM 593
L+A V E K+G PT TY L+ +GG + + LK + + D+V Y+T+
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Query: 594 IYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLRS 630
+ A + + +A +MV+ +PD +Y L S
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 171/426 (40%), Gaps = 42/426 (9%)
Query: 233 RDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWE 292
RD +N ++ L G+ +A + M ++ + P+ V+ +I +G K A+
Sbjct: 506 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-AFS 564
Query: 293 FFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYC 352
F++M + G + G+L+K C G EA + + ++YNTL+ A C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 353 KSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMG-LEPNA 411
KS L +A LF EM + + P S T+ L+ R+ + I E + G + PN
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 412 KSYTCLISAYGRPRKMSDMAADAFLR--MKRVGIKPTSHSYTALIHAYSVGGWHEKAYAA 469
YTC + K A + R M +G P + A+I YS G EK
Sbjct: 685 VMYTCFVDGM---FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 470 FENMLREEIKPSIETYTALLDAFRRSGDT-------------GMM--------------- 501
M + P++ TY LL + + D G++
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801
Query: 502 -------MKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMT 554
+KI K + VE R TFN+L+ G+ A D+V +G+ T
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Query: 555 YNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMV 614
+ +++ R + + +L EM+ I P+S Y +I RV D K AF ++M+
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921
Query: 615 KSGQVP 620
P
Sbjct: 922 AHKICP 927
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 1/321 (0%)
Query: 308 VVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQLEEAEGLFQEM 367
V L++ + EG+ ++L I M G + N ++ + KS + +EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 368 KTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRKM 427
+ + P ATFNIL++ E L+ +++ G P +Y ++ Y + +
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 428 SDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYTA 487
A + MK G+ +Y LIH K Y +M + I P+ TY
Sbjct: 245 K-AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 488 LLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIG 547
L++ F G + ++ M+S + VTFN L+DG +G + EA + G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 548 LQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAF 607
L P+ ++Y +L++ + + M + +TY+ MI + A
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 608 FYHKQMVKSGQVPDVKSYEKL 628
+M K G PD+ +Y L
Sbjct: 424 VLLNEMSKDGIDPDIVTYSAL 444
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 339 SNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKL 398
SN VY+ LI Y + ++++ +F+ M G P+ T N ++ + + + V
Sbjct: 121 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 399 LLELQDMGLEPNAKSYTCLIS---AYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIH 455
L E+ + P+ ++ LI+ A G K S + +M++ G PT +Y ++H
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQ----KMEKSGYAPTIVTYNTVLH 236
Query: 456 AYSVGGWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEG 515
Y G + A ++M + + + TY L+ RS + + M +
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 516 TRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLL 575
VT+N L++GF+ +G+ L A +++E GL P +T+N L++ + G + ++
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 576 KEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL------R 629
M + P V+Y ++ + +F A ++ +M ++G +Y +
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 630 SILDVKVATKNRRDKSAI 647
LD V N K I
Sbjct: 417 GFLDEAVVLLNEMSKDGI 434
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 171/408 (41%), Gaps = 3/408 (0%)
Query: 222 LFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDA-WKAYEAMEANNVRPDHVTCSIMITAM 280
LF + Q D++ Y + ISGL G+ A A EA NV P+ V + + M
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694
Query: 281 RKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSN 340
K G+ K F E+M+ G A++ + G + + EM + N
Sbjct: 695 FKAGQ-WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753
Query: 341 AIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLL 400
YN L++ Y K + + L++ + G+ P T + L+ EI K+L
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813
Query: 401 ELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVG 460
G+E + ++ LIS ++ + A D M +GI + A++ +
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEI-NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 461 GWHEKAYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTF 520
+++ M ++ I P Y L++ R GD + + M++ K+ V
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 521 NILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMAT 580
+ ++ AK G+ EA ++ K+ L PT+ ++ LM+ + G + +L M+
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 581 LNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+K D V+Y+ +I D AF +++M G + + +Y+ L
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 169/413 (40%), Gaps = 8/413 (1%)
Query: 237 VYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEK 296
+Y + G+F G++ E M+ PD VT + MI + G+ K E
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 297 MNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKSNQ 356
N+ G + L+ + + + ++ + GI + + ++L+ C+SN
Sbjct: 746 GNQNGGP-NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804
Query: 357 LEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTC 416
LE + + +G++ TFN+L+ + L+ + +G+ + +
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 417 LISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLRE 476
++S R + + + M + GI P S Y LI+ G + A+ E M+
Sbjct: 865 MVSVLNRNHRFQE-SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 477 EIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEA 536
+I P +A++ A + G + + M+ K+ T +F L+ K G +EA
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983
Query: 537 RDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYA 596
++ GL+ L++YN+L+ G + +L +EM ++ TY +I
Sbjct: 984 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Query: 597 FV-RVRDFKRAFFYHKQMVKSGQVPDVK----SYEKLRSILD-VKVATKNRRD 643
+ R F A K ++ G + + S+ L+ ++ +K N++D
Sbjct: 1044 LLARETAFSGADIILKDLLARGFITSMSLSQDSHRNLKMAMEKLKALQSNKKD 1096
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 191/385 (49%), Gaps = 11/385 (2%)
Query: 250 RYDDAWKAYEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVV 309
R++ ++A++ + ++C ++ A+ K RSA + + E + RK ++ +
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK-IQPNVFTF 226
Query: 310 GALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCK---SNQLEEAEGLFQE 366
++ + C G N+A + +M+ G N + YNTLI+ YCK + ++ +A+ + +E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 367 MKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSYTCLISAYGRPRK 426
M + P TFNIL+D + + K+ E+ D ++PN SY LI+ K
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 427 MSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENMLREEIKPSIETYT 486
+S+ A +M G++P +Y ALI+ + ++A F ++ + P+ Y
Sbjct: 347 ISE-AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 487 ALLDAFRRSG--DTGMMMKIWKLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFG 544
L+DA+ + G D G +K + M E + T+N L+ G + G A+ + +
Sbjct: 406 MLIDAYCKLGKIDDGFALK--EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 545 KIGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFK 604
GL P L+T+++LM Y R G++ K LLKEM+ + +KP +TY+ ++ + + + K
Sbjct: 464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 605 RAFFYHKQMVKSGQVP-DVKSYEKL 628
A QM K ++ +V SY L
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVL 547
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 164/325 (50%), Gaps = 7/325 (2%)
Query: 238 YNAAISGLFWCGRYDDAWKA---YEAMEANNVRPDHVTCSIMITAMRKNGRSAKEAWEFF 294
YN I G G +KA + M N+V P+ T +I+I K+ + + + F
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD-NLPGSMKVF 319
Query: 295 EKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEKKGIPSNAIVYNTLINAYCKS 354
++M + VK + +L+ C+ G +EA+ ++ +M G+ N I YN LIN +CK+
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 355 NQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVEKLLLELQDMGLEPNAKSY 414
+ L+EA +F +K +G PT+ +N+L+DAY + + + L E++ G+ P+ +Y
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 415 TCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHAYSVGGWHEKAYAAFENML 474
CLI+ R + + A F ++ G+ P ++ L+ Y G KA + M
Sbjct: 440 NCLIAGLCRNGNI-EAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMS 497
Query: 475 REEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSE-KVEGTRVTFNILLDGFAKQGQY 533
+ +KP TY ++ + + G+ + M E ++ ++N+LL G++++G+
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 534 LEARDVVSEFGKIGLQPTLMTYNML 558
+A +++E + GL P +TY ++
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIV 582
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 141/295 (47%), Gaps = 4/295 (1%)
Query: 337 IPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIVE 396
+ N+I+ + L+ AY +++ E F+ G K ++ + LM A + + VE
Sbjct: 149 VCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVE 208
Query: 397 KLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDMAADAFLRMKRVGIKPTSHSYTALIHA 456
+ E+ ++PN ++ +I+A + KM+ A D MK G P SY LI
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK-ARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 457 YSVGGWHEKAY---AAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMMSEKV 513
Y G + K Y A + M+ ++ P++ T+ L+D F + + MK++K M+ + V
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 514 EGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTSKLPQ 573
+ +++N L++G G+ EA + + G+QP L+TYN L+N + + +
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 574 LLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKL 628
+ + P + Y+ +I A+ ++ F ++M + G VPDV +Y L
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 153/328 (46%), Gaps = 15/328 (4%)
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNILMDAYSRRMQPEIV 395
G +A+ L+ A K N+ + E +++EM + ++P TFN++++A + +
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 396 EKLLLELQDMGLEPNAKSYTCLISAYGRPRKMSDM-AADAFLR-MKRVGIKPTSHSYTAL 453
++ +++ G PN SY LI Y + M ADA L+ M + P ++ L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 454 IHAYSVGGWHEK----AYAAFENMLREEIKPSIETYTALLDAFRRSGDTGMMMKIWKLMM 509
I + W + + F+ ML +++KP++ +Y +L++ G + + M+
Sbjct: 303 IDGF----WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 510 SEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGKIGLQPTLMTYNMLMNAYGRGGQTS 569
S V+ +T+N L++GF K EA D+ G PT YNML++AY + G+
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 570 KLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKRAFFYHKQMVKSGQVPDVKSYEKLR 629
L +EM I PD TY+ +I R + + A Q+ G +PD+ ++
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFH--- 474
Query: 630 SILDVKVATKNRRDKSAILGIINSKMGM 657
IL K K+A+L SKMG+
Sbjct: 475 -ILMEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Query: 217 DDLMVLFKNLPQSKEFRDAHVYNAAISGLFWCGRYDDAWKAYEAMEANNVRPDHVTCSIM 276
DD L + + + D YN I+GL G + A K ++ + + + PD VT I+
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHIL 476
Query: 277 ITAMRKNGRSAKEAWEFFEKMNRKGVKLSQEVVGALMKSFCDEGLKNEALIIQMEMEK-K 335
+ + G S K A ++M++ G+K +MK +C EG A ++ +MEK +
Sbjct: 477 MEGYCRKGESRKAAM-LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 336 GIPSNAIVYNTLINAYCKSNQLEEAEGLFQEMKTKGLKPTSATFNIL 382
+ N YN L+ Y + +LE+A L EM KGL P T+ I+
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 487 ALLDAFRRSGDTGMMMKIW-KLMMSEKVEGTRVTFNILLDGFAKQGQYLEARDVVSEFGK 545
+ LD F R+G + I+ + M + V + ++L+ +A ++ + G
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181
Query: 546 IGLQPTLMTYNMLMNAYGRGGQTSKLPQLLKEMATLNIKPDSVTYSTMIYAFVRVRDFKR 605
G + + ++ LM A + +++ + + KEM I+P+ T++ +I A + +
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 606 AFFYHKQMVKSGQVPDVKSYEKL 628
A + M G P+V SY L
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTL 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,660,162
Number of Sequences: 539616
Number of extensions: 10673632
Number of successful extensions: 43531
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 33184
Number of HSP's gapped (non-prelim): 3054
length of query: 686
length of database: 191,569,459
effective HSP length: 124
effective length of query: 562
effective length of database: 124,657,075
effective search space: 70057276150
effective search space used: 70057276150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)