BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044254
MGEDLLTSLSMENHHPSTLLSMDSSGVSNEELDREMNRSMILSRPPDINLPLSAERSPPP
PSWSTDPFDILDVSLGPQVNESDNLLNASKSGRKCAKRLDSVWGACFFFTYYFKPVLNEK
SKCKVIRDSNGFLEFDKTDLELEVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHS
RQGERPFPFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLKGIDEEEQKRWMEL
TGRDLNFSVPPEASEFSSWRNLPNTEFELDRPLPPLKTHSNSHPKKLLNGSALNLSTRPV
SHSNGDGVDLSH

High Scoring Gene Products

Symbol, full name Information P value
SLT1
AT2G37570
protein from Arabidopsis thaliana 8.7e-127
FYD protein from Arabidopsis thaliana 8.7e-111
AT5G02480 protein from Arabidopsis thaliana 4.3e-109

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044254
        (312 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2040721 - symbol:SLT1 "AT2G37570" species:3702...  1245  8.7e-127  1
TAIR|locus:2101227 - symbol:FYD species:3702 "Arabidopsis...  1094  8.7e-111  1
TAIR|locus:2181803 - symbol:AT5G02480 "AT5G02480" species...  1078  4.3e-109  1


>TAIR|locus:2040721 [details] [associations]
            symbol:SLT1 "AT2G37570" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0042538 "hyperosmotic salinity
            response" evidence=IMP] [GO:0009408 "response to heat"
            evidence=RCA] [GO:0009644 "response to high light intensity"
            evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
            evidence=RCA] EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0042538 UniGene:At.12789 EMBL:AF213400 EMBL:AY054667
            EMBL:AY081508 IPI:IPI00542332 PIR:T02523 RefSeq:NP_565864.1
            UniGene:At.74051 ProteinModelPortal:O80926 SMR:O80926
            EnsemblPlants:AT2G37570.1 GeneID:818333 KEGG:ath:AT2G37570
            TAIR:At2g37570 eggNOG:NOG282356 HOGENOM:HOG000237499
            InParanoid:O80926 OMA:GDRELFI PhylomeDB:O80926
            ProtClustDB:CLSN2688307 ArrayExpress:O80926 Genevestigator:O80926
            Uniprot:O80926
        Length = 494

 Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
 Identities = 231/304 (75%), Positives = 261/304 (85%)

Query:    11 MENHHPSTLLSMDSSGVSNEELDREMN--RSMILSRPPDINLPLSAERSPPPPSWSTDPF 68
             MENHHPSTLLSMDSS  S+EELD EMN  R  +LS PPDINLPLSAERSPPPP W+ D  
Sbjct:     1 MENHHPSTLLSMDSSASSHEELDLEMNNNRQSLLSGPPDINLPLSAERSPPPPPWNLDAC 60

Query:    69 DILDVSLGPQVNESDNLLNA-SKSGRKCAKRLDSVWGACFFFTYYFKPVLNEKSKCKVIR 127
             DILDV LG Q  E++N ++   K GRKCAKR+DS+WGA FFF++YFKP LNEKSK K++R
Sbjct:    61 DILDVGLGSQAYETENYMSVVPKVGRKCAKRVDSIWGAWFFFSFYFKPALNEKSKAKIVR 120

Query:   128 DSNGFLEFDKTDLELEVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPF 187
             DSNG   FDK+DL+L+VFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQG+R F
Sbjct:   121 DSNGISGFDKSDLKLDVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGDRLF 180

Query:   188 PFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLKGIDEEEQKRWMELTGRDLNF 247
             PFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIE+V  PNL  +DEEE+KRWMELTGRDLNF
Sbjct:   181 PFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIELVPLPNLTCLDEEERKRWMELTGRDLNF 240

Query:   248 SVPPEASEFSSWRNLPNTEFELDRPLPPLKTHSNSHPKKLLNGSALNLSTRPVSHSNGDG 307
             ++PPEAS+F SWRNLPNT+FEL+RP P LK  + +H KKLLNGS LNLST+P +HSNG+ 
Sbjct:   241 TIPPEASDFGSWRNLPNTDFELERPTPSLKNPTANHSKKLLNGSGLNLSTQPSNHSNGEA 300

Query:   308 VDLS 311
              DLS
Sbjct:   301 TDLS 304


>TAIR|locus:2101227 [details] [associations]
            symbol:FYD species:3702 "Arabidopsis thaliana"
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006487
            "protein N-linked glycosylation" evidence=RCA] [GO:0009408
            "response to heat" evidence=RCA] [GO:0009644 "response to high
            light intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] EMBL:CP002686 GO:GO:0009941 EMBL:AC069474
            EMBL:AP002055 ProtClustDB:CLSN2688307 EMBL:AF360293 EMBL:AY070020
            IPI:IPI00532970 RefSeq:NP_001030681.1 RefSeq:NP_566427.1
            RefSeq:NP_850571.1 RefSeq:NP_974294.1 UniGene:At.20275
            ProteinModelPortal:Q9LHA9 SMR:Q9LHA9 EnsemblPlants:AT3G12570.1
            EnsemblPlants:AT3G12570.2 EnsemblPlants:AT3G12570.3
            EnsemblPlants:AT3G12570.4 GeneID:820437 KEGG:ath:AT3G12570
            TAIR:At3g12570 InParanoid:Q9LHA9 OMA:VRSPNLM PhylomeDB:Q9LHA9
            ArrayExpress:Q9LHA9 Genevestigator:Q9LHA9 Uniprot:Q9LHA9
        Length = 489

 Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
 Identities = 203/303 (66%), Positives = 249/303 (82%)

Query:     1 MGEDLLTSLSMENHHPSTLLSMDSSGVSNEELDREMNRSMILSRPPDINLPLSAERSPPP 60
             MGE L+T+LSMEN+HPSTLLSMDS   ++EE +R+MN S+IL+ PPDINLPLS+E  P  
Sbjct:     1 MGETLITTLSMENYHPSTLLSMDSGAFTHEESERDMNGSLILTGPPDINLPLSSEARPSL 60

Query:    61 PSWSTDPFDILDVSLGPQVNESDNLLNASKSGRKCAKRLDSVWGACFFFTYYFKPVLNEK 120
               W+ +  DILDV LGPQ+ E + +++  K  +K  KR+DS WGA  FF++YFKPVL+EK
Sbjct:    61 LLWN-EHCDILDVGLGPQLYEPEAVVHVPKVAKKYNKRVDSAWGAWLFFSFYFKPVLDEK 119

Query:   121 SKCKVIRDSNGFLEFDKTDLELEVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHS 180
             SK K+ RDSNG   +DK+DL+L+ FLVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHS
Sbjct:   120 SKSKLTRDSNGLSGYDKSDLQLDSFLVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHS 179

Query:   181 RQGERPFPFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLKGIDEEEQKRWMEL 240
             R+GERPFPFSV+KGFVRSHRMQRKHYRGLSNPQC+HGIEVV SPNL  + E+E+K+W EL
Sbjct:   180 REGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCLHGIEVVYSPNLSVLSEDEKKKWTEL 239

Query:   241 TGRDLNFSVPPEASEFSSWRNLPNTEFELDRPLPPLKTHSNSHPKKLLNGSALNLSTRPV 300
             TGRD+NF++P EAS++ SWRNLPNTEFE +RPLP  K + ++H KKL NG+ LNLST   
Sbjct:   240 TGRDVNFAIPAEASDYGSWRNLPNTEFEAERPLPLAKANGHTHLKKL-NGTCLNLSTHSP 298

Query:   301 SHS 303
              H+
Sbjct:   299 DHA 301


>TAIR|locus:2181803 [details] [associations]
            symbol:AT5G02480 "AT5G02480" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0009408
            "response to heat" evidence=RCA] [GO:0009644 "response to high
            light intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] InterPro:IPR002068 EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR008978 SUPFAM:SSF49764
            PROSITE:PS01031 HOGENOM:HOG000237499 ProtClustDB:CLSN2688307
            EMBL:AF360137 EMBL:AY039991 EMBL:AF412077 IPI:IPI00528328
            RefSeq:NP_568100.1 UniGene:At.23564 ProteinModelPortal:Q9C5N0
            SMR:Q9C5N0 STRING:Q9C5N0 PaxDb:Q9C5N0 PRIDE:Q9C5N0
            EnsemblPlants:AT5G02480.1 GeneID:831883 KEGG:ath:AT5G02480
            TAIR:At5g02480 eggNOG:NOG268863 InParanoid:Q9C5N0 OMA:RIPEEAN
            PhylomeDB:Q9C5N0 ArrayExpress:Q9C5N0 Genevestigator:Q9C5N0
            Uniprot:Q9C5N0
        Length = 508

 Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
 Identities = 215/325 (66%), Positives = 249/325 (76%)

Query:     1 MGEDLLTSLSMENHHPSTLLSMDSSGVSNEELDREMN---RSMILSRPPDINLPLSAERS 57
             M   +LT LSMENHHPSTLLSMDSSG S+EELD EMN   R + L  PPDINLPLS  RS
Sbjct:     1 MKGSILTVLSMENHHPSTLLSMDSSGSSHEELDLEMNNGNRQITLYNPPDINLPLSVGRS 60

Query:    58 PPPPSWSTDPFD-ILDVSLGPQVNESDNLLNA--SKSGRKCAKRLDSVWGACFFFTYYFK 114
              P  SW+ D  D ILDV L   V E++  LN   SK  +KC KR DS+WGA FFF++YF+
Sbjct:    61 SP--SWNLDSCDNILDVGLSSHVYETETFLNVVPSKVAKKCLKRGDSMWGAWFFFSFYFR 118

Query:   115 PVLNEKSKCKVIRDSNG--------FLEFDKTDLELEVFLVQHDMENMYMWVFKERPENA 166
             P LNEKSK KVIR+S G        F  FDK+DL+L+VFLVQHDMENMYMW FK++PENA
Sbjct:   119 PALNEKSKSKVIRESGGGGGGGGGCFTGFDKSDLKLDVFLVQHDMENMYMWAFKDKPENA 178

Query:   167 LGKMQLRSYMNGHSRQGERPFPFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNL 226
             LGKMQLRSYMNGHSRQGERPFPFS EKGFVRSHRMQRKHYRGLSNPQC+HGIE V+SP+L
Sbjct:   179 LGKMQLRSYMNGHSRQGERPFPFSAEKGFVRSHRMQRKHYRGLSNPQCLHGIEFVASPSL 238

Query:   227 KGIDEEEQKRWMELTGRDLNFSVPPEASEFSSWRNLPNTEFELDRPLPPLKTHSNSHPKK 286
              G+ EE++KRWMELTGRDL F++PP+AS+F SWRNLPNT+ EL+RP    K   N+  KK
Sbjct:   239 FGVGEEDKKRWMELTGRDLKFTIPPDASDFGSWRNLPNTDIELERPAHVTKAAPNN-AKK 297

Query:   287 LLNGSALNLSTRPVSHSNGDGVDLS 311
             +LNGS L+L++     SNGD  D S
Sbjct:   298 ILNGSGLHLTSNASFSSNGDSSDQS 322


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      312       312   0.00080  116 3  11 22  0.44    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  240 KB (2129 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.15u 0.11s 29.26t   Elapsed:  00:00:02
  Total cpu time:  29.15u 0.11s 29.26t   Elapsed:  00:00:02
  Start:  Sat May 11 15:24:11 2013   End:  Sat May 11 15:24:13 2013

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