Query 044254
Match_columns 312
No_of_seqs 25 out of 27
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 22:41:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044254.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044254hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x1ga1 b.55.1.1 (A:8-123) Ple 68.7 6.1 0.00044 25.8 5.8 69 152-240 37-111 (116)
2 d2elba2 b.55.1.1 (A:274-374) D 51.0 5.3 0.00039 26.7 2.9 60 158-241 38-97 (101)
3 d1v88a_ b.55.1.1 (A:) Oxystero 46.4 14 0.001 24.8 4.6 16 226-241 104-119 (130)
4 d1fgya_ b.55.1.1 (A:) Grp1 {Mo 35.9 14 0.001 24.4 3.1 76 158-241 35-115 (127)
5 d2cofa1 b.55.1.1 (A:8-102) KIA 30.2 11 0.0008 24.5 1.7 16 226-241 74-89 (95)
6 d2i5fa1 b.55.1.1 (A:244-347) P 29.3 17 0.0012 23.0 2.5 16 226-241 84-99 (104)
7 d1p7aa_ g.37.1.1 (A:) Kruppel- 28.3 15 0.0011 22.3 2.0 25 178-202 1-28 (37)
8 d1t15a2 c.15.1.3 (A:1758-1859) 26.2 41 0.003 21.6 4.1 38 213-250 2-39 (102)
9 d1pyya2 d.11.1.1 (A:693-750) P 24.2 19 0.0014 23.3 2.0 26 223-248 4-29 (58)
10 d1wgqa_ b.55.1.1 (A:) FYVE, Rh 19.7 26 0.0019 22.8 2.0 17 226-242 83-99 (109)
No 1
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.69 E-value=6.1 Score=25.80 Aligned_cols=69 Identities=13% Similarity=0.281 Sum_probs=38.7
Q ss_pred cceeeEeeecCccc--ccccchhhhcccCCCCCCCCCCCccccccchhhhhhhhhhccCCCCCccccceeEeeCC----C
Q 044254 152 ENMYMWVFKERPEN--ALGKMQLRSYMNGHSRQGERPFPFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSP----N 225 (312)
Q Consensus 152 ENMYMWvFKerPeN--ALGKMQLRSyMNGHSR~GE~~FPFS~dkGFvRSHRMQRKHYRGLSNPQCvHGIEvV~sP----n 225 (312)
+.+|+|.+.+..++ ++|.+.|.++-..-......++++... -..|.+.||... -
T Consensus 37 ~~~~~~~~~~~~~~~~p~~~i~L~~~~i~~~~~~~~~~~~~~~--------------------~~~~~f~i~~~~~~~~~ 96 (116)
T d1x1ga1 37 DPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGN--------------------VQGNLFKVITKDDTHYY 96 (116)
T ss_dssp SSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSC--------------------CCSSCEEECCTTCCCEE
T ss_pred CCcEEEEeccccccccceeEEEcCCCEEEEecccCcccccccc--------------------cccceeEEEeCCCeEEE
Confidence 45678877766654 478888877654322223333322211 122334444322 1
Q ss_pred CCCCCHHHHHhhhhh
Q 044254 226 LKGIDEEEQKRWMEL 240 (312)
Q Consensus 226 L~~~~e~d~kRW~EL 240 (312)
|..=+++|+.+|++.
T Consensus 97 f~a~s~ee~~~Wi~a 111 (116)
T d1x1ga1 97 IQASSKAERAEWIEA 111 (116)
T ss_dssp ECCSSHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHH
Confidence 567899999999974
No 2
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.96 E-value=5.3 Score=26.67 Aligned_cols=60 Identities=10% Similarity=0.134 Sum_probs=31.2
Q ss_pred eeecCcccccccchhhhcccCCCCCCCCCCCccccccchhhhhhhhhhccCCCCCccccceeEeeCCCCCCCCHHHHHhh
Q 044254 158 VFKERPENALGKMQLRSYMNGHSRQGERPFPFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLKGIDEEEQKRW 237 (312)
Q Consensus 158 vFKerPeNALGKMQLRSyMNGHSR~GE~~FPFS~dkGFvRSHRMQRKHYRGLSNPQCvHGIEvV~sPnL~~~~e~d~kRW 237 (312)
-||+...-+.|.+.|++..---+...++.|-|.+.- + +++ ++=-|..-+++|++.|
T Consensus 38 y~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~f~i~~-----~-----------~~~--------~~~~l~A~s~~e~~~W 93 (101)
T d2elba2 38 SQARGDVAGGLAMDIDNCSVMAVDCEDRRYCFQITS-----F-----------DGK--------KSSILQAESKKDHEEW 93 (101)
T ss_dssp EECTTCCCE----EEEECCCCCCCCCCSSSSSEECC-----C-----------SSS--------CCCCEECSSHHHHHHH
T ss_pred EEccCCcccceEEEecccccccccccCCcceEEEEe-----e-----------ccc--------ceEEEECCCHHHHHHH
Confidence 467777778889988776543333334444444310 0 010 1113566799999999
Q ss_pred hhhc
Q 044254 238 MELT 241 (312)
Q Consensus 238 ~ELT 241 (312)
++..
T Consensus 94 i~al 97 (101)
T d2elba2 94 ICTI 97 (101)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9753
No 3
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.37 E-value=14 Score=24.78 Aligned_cols=16 Identities=19% Similarity=0.638 Sum_probs=12.8
Q ss_pred CCCCCHHHHHhhhhhc
Q 044254 226 LKGIDEEEQKRWMELT 241 (312)
Q Consensus 226 L~~~~e~d~kRW~ELT 241 (312)
|..=+++|+++|++..
T Consensus 104 l~A~s~~e~~~Wi~al 119 (130)
T d1v88a_ 104 IRATSESDGRCWMDAL 119 (130)
T ss_dssp EECSSHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHH
Confidence 3456899999999865
No 4
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.85 E-value=14 Score=24.44 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=39.0
Q ss_pred eeecC-cccccccchhhhcccCCCCCCCCCCCccccccchhhhhhhhhhccCCCCCccccceeEeeCCC----CCCCCHH
Q 044254 158 VFKER-PENALGKMQLRSYMNGHSRQGERPFPFSVEKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPN----LKGIDEE 232 (312)
Q Consensus 158 vFKer-PeNALGKMQLRSyMNGHSR~GE~~FPFS~dkGFvRSHRMQRKHYRGLSNPQCvHGIEvV~sPn----L~~~~e~ 232 (312)
.||.. .+...|.+.|+++...-.....+++-|..... .+..+. .+.........++.++. |..-+++
T Consensus 35 yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~a~s~~ 106 (127)
T d1fgya_ 35 YFEYTTDKEPRGIIPLENLSIREVLDPRKPNCFELYNP------SHKGQV--IKACKTEADGRVVEGNHVVYRISAPSPE 106 (127)
T ss_dssp EESSTTCSSCSEEEECTTCEEEEECCSSCSSEEEEECS------SSTTCC--CCCEEECTTSCEEECCCSEEEEECSSHH
T ss_pred EEccCCCccccceEeCCCeEEEEccCCCCCceEEEecc------cccccc--ccccccccceeEeeCCCeEEEEECCCHH
Confidence 35444 45568999999876655544455554433211 111000 01112222222333332 5566899
Q ss_pred HHHhhhhhc
Q 044254 233 EQKRWMELT 241 (312)
Q Consensus 233 d~kRW~ELT 241 (312)
|+.+|++..
T Consensus 107 e~~~Wi~aL 115 (127)
T d1fgya_ 107 EKEEWMKSI 115 (127)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
No 5
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.24 E-value=11 Score=24.46 Aligned_cols=16 Identities=31% Similarity=0.603 Sum_probs=13.8
Q ss_pred CCCCCHHHHHhhhhhc
Q 044254 226 LKGIDEEEQKRWMELT 241 (312)
Q Consensus 226 L~~~~e~d~kRW~ELT 241 (312)
|..-+++|+.+|++..
T Consensus 74 l~A~s~~e~~~Wi~~L 89 (95)
T d2cofa1 74 LEAKSSEEMGHWLGLL 89 (95)
T ss_dssp EECSSHHHHHHHHHHH
T ss_pred eeCCCHHHHHHHHHHH
Confidence 6788999999999864
No 6
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.33 E-value=17 Score=23.04 Aligned_cols=16 Identities=19% Similarity=0.576 Sum_probs=12.8
Q ss_pred CCCCCHHHHHhhhhhc
Q 044254 226 LKGIDEEEQKRWMELT 241 (312)
Q Consensus 226 L~~~~e~d~kRW~ELT 241 (312)
|..-+++|+++|++..
T Consensus 84 ~~a~s~~e~~~W~~ai 99 (104)
T d2i5fa1 84 LQAATPKERTEWIKAI 99 (104)
T ss_dssp EECSSHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHH
Confidence 4566999999999853
No 7
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.32 E-value=15 Score=22.34 Aligned_cols=25 Identities=32% Similarity=0.740 Sum_probs=17.5
Q ss_pred CCCC--CCCCCCCcc-ccccchhhhhhh
Q 044254 178 GHSR--QGERPFPFS-VEKGFVRSHRMQ 202 (312)
Q Consensus 178 GHSR--~GE~~FPFS-~dkGFvRSHRMQ 202 (312)
||.| -||+||.-. -+|.|.++.-++
T Consensus 1 gh~R~HTgeKPy~C~~C~k~F~~~~~L~ 28 (37)
T d1p7aa_ 1 GSTRGSTGIKPFQCPDCDRSFSRSDHLA 28 (37)
T ss_dssp CCSSTTCCSSSBCCTTTCCCBSSHHHHH
T ss_pred CCCCccCCccCeEeCCCCCEecCHHHHH
Confidence 6776 488888764 478888776553
No 8
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.19 E-value=41 Score=21.58 Aligned_cols=38 Identities=11% Similarity=0.269 Sum_probs=29.2
Q ss_pred ccccceeEeeCCCCCCCCHHHHHhhhhhccccccccCC
Q 044254 213 QCVHGIEVVSSPNLKGIDEEEQKRWMELTGRDLNFSVP 250 (312)
Q Consensus 213 QCvHGIEvV~sPnL~~~~e~d~kRW~ELTGRd~nFsiP 250 (312)
+...|+.|.-+=.+...+.++.+++++..|-.+.=.++
T Consensus 2 kiF~g~~i~~~g~~~~~~~~~L~~li~~~GG~v~~~~~ 39 (102)
T d1t15a2 2 KIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELS 39 (102)
T ss_dssp CTTTTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSGG
T ss_pred CCCCCcEEEEeCCCCCcCHHHHHHHHHHhCCEEeeccc
Confidence 34567777776667789999999999999998754444
No 9
>d1pyya2 d.11.1.1 (A:693-750) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=24.21 E-value=19 Score=23.30 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=23.6
Q ss_pred CCCCCCCCHHHHHhhhhhcccccccc
Q 044254 223 SPNLKGIDEEEQKRWMELTGRDLNFS 248 (312)
Q Consensus 223 sPnL~~~~e~d~kRW~ELTGRd~nFs 248 (312)
-|||.|++.+|-.+-.+..|-.+++.
T Consensus 4 vPdl~G~s~~~A~~~l~~~gl~v~~~ 29 (58)
T d1pyya2 4 VPDMYGWTKETAETLAKWLNIELEFQ 29 (58)
T ss_dssp CCCCTTCBHHHHHHHHHHTTCEEEEE
T ss_pred CCCcCCCcHHHHHHHHHHcCCEEEEe
Confidence 49999999999999999999888774
No 10
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=19.75 E-value=26 Score=22.83 Aligned_cols=17 Identities=24% Similarity=0.558 Sum_probs=13.3
Q ss_pred CCCCCHHHHHhhhhhcc
Q 044254 226 LKGIDEEEQKRWMELTG 242 (312)
Q Consensus 226 L~~~~e~d~kRW~ELTG 242 (312)
|..-+++|+++|++..-
T Consensus 83 f~a~s~~~~~~Wi~ai~ 99 (109)
T d1wgqa_ 83 FKADDAHSTQRWIDAFQ 99 (109)
T ss_dssp EECSSHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHH
Confidence 44668999999998653
Done!