Query 044260
Match_columns 511
No_of_seqs 297 out of 2010
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 12:58:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044260.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044260hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 2E-121 4E-126 975.4 42.4 503 9-511 9-511 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 1E-118 3E-123 955.2 46.6 498 9-507 16-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 3E-116 6E-121 937.9 44.3 497 8-505 4-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 3E-109 6E-114 879.6 42.5 469 36-505 2-476 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 6E-100 1E-104 799.5 40.3 429 77-505 35-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 6E-78 1.3E-82 596.2 24.7 290 94-383 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 3.9E-55 8.5E-60 444.1 22.4 311 100-482 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 3.6E-51 7.8E-56 430.0 30.5 348 100-482 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 2.9E-51 6.3E-56 427.5 29.4 344 102-479 2-361 (361)
10 PLN03168 chalcone synthase; Pr 100.0 2.8E-50 6.1E-55 423.2 31.5 350 100-485 14-389 (389)
11 PLN03169 chalcone synthase fam 100.0 6.9E-50 1.5E-54 420.9 30.9 352 96-482 16-389 (391)
12 PLN03173 chalcone synthase; Pr 100.0 7.3E-50 1.6E-54 419.8 30.9 350 100-483 15-388 (391)
13 PLN03171 chalcone synthase-lik 100.0 1.4E-48 2.9E-53 411.9 31.7 353 99-483 20-396 (399)
14 PLN03170 chalcone synthase; Pr 100.0 8.6E-49 1.9E-53 413.2 29.5 350 100-483 19-392 (401)
15 COG3424 BcsA Predicted naringe 100.0 2.2E-48 4.8E-53 380.4 23.4 346 102-483 2-354 (356)
16 PRK05963 3-oxoacyl-(acyl carri 100.0 1.8E-47 3.8E-52 393.4 28.1 322 101-481 3-326 (326)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 2.2E-46 4.9E-51 389.5 28.5 333 98-483 4-340 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 3.2E-46 7E-51 392.1 27.6 332 100-481 46-379 (379)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 6E-45 1.3E-49 375.1 29.0 325 100-481 3-329 (329)
20 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 3E-45 6.5E-50 377.2 25.8 321 101-481 2-325 (326)
21 PRK12879 3-oxoacyl-(acyl carri 100.0 1.1E-44 2.4E-49 371.9 28.9 321 100-481 3-324 (325)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 1.3E-44 2.8E-49 373.7 27.5 320 99-481 3-338 (338)
23 PRK06840 hypothetical protein; 100.0 8.5E-44 1.8E-48 368.1 28.6 328 99-482 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 1.8E-43 3.9E-48 361.6 28.9 319 101-479 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 4.6E-43 9.9E-48 359.1 27.6 313 101-481 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 1.2E-41 2.6E-46 348.6 28.3 316 100-481 2-318 (319)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 3.4E-41 7.4E-46 353.9 30.2 346 101-482 2-378 (378)
28 PRK04262 hypothetical protein; 100.0 7.7E-42 1.7E-46 354.9 24.7 311 101-486 2-313 (347)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 4.1E-41 8.9E-46 349.2 22.2 315 102-495 2-318 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 7.2E-40 1.6E-44 343.2 29.5 347 100-481 1-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 5.8E-39 1.2E-43 328.9 24.1 321 101-479 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 4.7E-35 1E-39 307.4 25.9 306 102-482 1-318 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 3.7E-33 8.1E-38 296.6 24.7 311 98-483 1-372 (459)
34 PF00195 Chal_sti_synt_N: Chal 100.0 6.3E-32 1.4E-36 261.6 15.6 203 96-300 9-226 (226)
35 COG3425 PksG 3-hydroxy-3-methy 100.0 3E-30 6.4E-35 263.5 23.4 313 101-486 2-315 (377)
36 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 2.7E-30 5.8E-35 274.5 22.0 315 101-483 1-375 (454)
37 cd00327 cond_enzymes Condensin 100.0 7.5E-28 1.6E-32 237.8 15.3 235 176-479 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 6.3E-25 1.4E-29 225.4 13.9 252 176-479 11-332 (332)
39 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.3E-18 2.7E-23 161.5 12.6 168 98-300 1-173 (174)
40 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 1.6E-19 3.5E-24 151.5 5.6 83 396-481 8-90 (90)
41 PF02797 Chal_sti_synt_C: Chal 99.8 8.9E-19 1.9E-23 160.8 9.0 119 336-482 24-150 (151)
42 TIGR02845 spore_V_AD stage V s 99.7 3.5E-15 7.5E-20 150.9 20.0 115 177-301 51-173 (327)
43 KOG1393 Hydroxymethylglutaryl- 99.7 2.5E-15 5.5E-20 151.6 18.7 316 98-486 8-381 (462)
44 PRK06147 3-oxoacyl-(acyl carri 99.7 1.4E-15 3E-20 158.4 16.1 256 175-482 64-343 (348)
45 PRK08304 stage V sporulation p 99.5 4E-13 8.6E-18 136.3 19.8 115 178-301 58-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 1.5E-12 3.3E-17 137.7 19.3 184 100-301 1-243 (406)
47 cd00751 thiolase Thiolase are 99.5 2E-12 4.4E-17 136.5 18.1 93 177-270 23-116 (386)
48 PF08545 ACP_syn_III: 3-Oxoacy 99.4 6.5E-13 1.4E-17 109.1 7.2 66 231-301 1-66 (80)
49 PRK09051 beta-ketothiolase; Pr 99.4 3.1E-11 6.6E-16 127.9 20.3 93 177-270 28-122 (394)
50 PRK05656 acetyl-CoA acetyltran 99.4 3.1E-11 6.7E-16 127.9 20.1 93 177-270 27-120 (393)
51 PRK06064 acetyl-CoA acetyltran 99.3 8.8E-11 1.9E-15 124.2 20.5 91 177-269 23-116 (389)
52 PRK09052 acetyl-CoA acetyltran 99.3 8.4E-11 1.8E-15 124.7 20.0 93 177-270 32-127 (399)
53 PRK08313 acetyl-CoA acetyltran 99.3 1.4E-10 3.1E-15 122.6 20.7 91 177-269 25-117 (386)
54 cd00829 SCP-x_thiolase Thiolas 99.3 1.2E-10 2.7E-15 122.2 20.0 93 176-270 16-109 (375)
55 smart00825 PKS_KS Beta-ketoacy 99.3 7E-11 1.5E-15 126.0 18.1 121 176-301 87-247 (424)
56 cd00828 elong_cond_enzymes "el 99.3 1.7E-10 3.7E-15 122.4 18.7 123 175-301 71-243 (407)
57 TIGR03150 fabF beta-ketoacyl-a 99.3 2.8E-10 6.1E-15 120.6 19.6 121 176-301 71-243 (407)
58 PRK06501 3-oxoacyl-(acyl carri 99.2 8.6E-10 1.9E-14 118.1 22.7 180 101-301 12-257 (425)
59 PRK12404 stage V sporulation p 99.2 7.7E-10 1.7E-14 112.0 19.6 115 178-301 56-177 (334)
60 PRK06025 acetyl-CoA acetyltran 99.2 7.6E-10 1.6E-14 117.3 19.3 94 176-270 29-124 (417)
61 PRK06445 acetyl-CoA acetyltran 99.2 9E-10 2E-14 116.8 18.6 90 177-269 33-126 (394)
62 cd00833 PKS polyketide synthas 99.2 1.8E-09 3.9E-14 114.7 20.7 120 175-301 86-247 (421)
63 PRK07314 3-oxoacyl-(acyl carri 99.2 4.1E-09 9E-14 112.1 22.4 185 100-301 2-244 (411)
64 PRK06690 acetyl-CoA acetyltran 99.1 6.1E-09 1.3E-13 109.0 19.5 90 176-270 25-114 (361)
65 TIGR01930 AcCoA-C-Actrans acet 99.1 4.3E-10 9.2E-15 118.9 11.0 93 177-270 22-115 (386)
66 PRK06333 3-oxoacyl-(acyl carri 99.1 6.1E-09 1.3E-13 111.3 19.6 119 176-301 82-256 (424)
67 PRK07108 acetyl-CoA acetyltran 99.1 6.6E-10 1.4E-14 117.6 10.9 93 177-270 28-122 (392)
68 PRK08256 lipid-transfer protei 99.0 1.1E-08 2.4E-13 108.4 19.6 88 177-269 23-111 (391)
69 PLN02644 acetyl-CoA C-acetyltr 99.0 1.2E-08 2.6E-13 108.3 19.9 92 177-269 26-118 (394)
70 PRK06205 acetyl-CoA acetyltran 99.0 8E-10 1.7E-14 117.5 10.5 93 177-270 27-120 (404)
71 PRK08235 acetyl-CoA acetyltran 99.0 1.1E-09 2.4E-14 116.0 10.8 93 177-270 27-120 (393)
72 PRK08242 acetyl-CoA acetyltran 99.0 1.5E-09 3.2E-14 115.2 11.3 94 176-270 28-123 (402)
73 PRK08439 3-oxoacyl-(acyl carri 99.0 2.3E-08 5E-13 106.5 20.5 120 175-301 71-244 (406)
74 PRK08722 3-oxoacyl-(acyl carri 99.0 5.5E-08 1.2E-12 103.9 21.6 121 176-301 74-246 (414)
75 PRK12578 acetyl-CoA acetyltran 99.0 2.6E-09 5.5E-14 113.0 11.1 92 177-270 22-114 (385)
76 PRK06059 lipid-transfer protei 99.0 2E-09 4.4E-14 114.3 10.4 92 177-270 24-117 (399)
77 PRK08170 acetyl-CoA acetyltran 98.9 3.6E-09 7.8E-14 113.3 11.0 93 177-270 28-121 (426)
78 PRK07103 polyketide beta-ketoa 98.9 2.6E-08 5.7E-13 106.2 16.7 121 176-301 80-251 (410)
79 PRK09116 3-oxoacyl-(acyl carri 98.9 6.1E-08 1.3E-12 103.2 18.8 187 100-301 2-245 (405)
80 cd00826 nondecarbox_cond_enzym 98.9 6E-09 1.3E-13 110.5 10.8 93 176-270 23-117 (393)
81 PRK06954 acetyl-CoA acetyltran 98.9 7.2E-09 1.6E-13 110.0 10.7 93 177-270 32-125 (397)
82 PRK05790 putative acyltransfer 98.9 1E-08 2.2E-13 108.7 11.2 93 177-270 27-120 (393)
83 PF00108 Thiolase_N: Thiolase, 98.9 9.9E-09 2.2E-13 103.1 10.3 95 176-271 26-121 (264)
84 PRK05952 3-oxoacyl-(acyl carri 98.8 1.7E-07 3.6E-12 99.1 19.3 116 179-301 59-222 (381)
85 PLN02787 3-oxoacyl-[acyl-carri 98.8 2.2E-07 4.8E-12 102.1 20.8 181 100-301 129-373 (540)
86 PRK06065 acetyl-CoA acetyltran 98.8 1.4E-08 2.9E-13 107.7 10.4 90 177-268 30-121 (392)
87 cd00832 CLF Chain-length facto 98.8 2E-07 4.4E-12 99.1 19.0 119 176-302 71-242 (399)
88 PRK09185 3-oxoacyl-(acyl carri 98.8 6.7E-07 1.5E-11 94.8 21.4 81 212-299 137-233 (392)
89 PLN02836 3-oxoacyl-[acyl-carri 98.8 8.8E-07 1.9E-11 95.3 22.6 121 176-301 93-267 (437)
90 PRK07661 acetyl-CoA acetyltran 98.8 3E-08 6.5E-13 105.0 11.0 93 177-270 28-122 (391)
91 PTZ00050 3-oxoacyl-acyl carrie 98.8 5E-07 1.1E-11 96.7 19.6 119 176-301 77-251 (421)
92 PRK07967 3-oxoacyl-(acyl carri 98.7 7.5E-07 1.6E-11 94.9 20.5 185 100-301 2-244 (406)
93 PRK13359 beta-ketoadipyl CoA t 98.7 5.3E-08 1.2E-12 103.4 11.2 94 176-270 26-122 (400)
94 PRK08963 fadI 3-ketoacyl-CoA t 98.7 4.6E-08 9.9E-13 104.9 10.1 93 177-270 30-123 (428)
95 PRK08257 acetyl-CoA acetyltran 98.7 7.7E-07 1.7E-11 97.1 19.7 91 177-269 28-120 (498)
96 PLN02287 3-ketoacyl-CoA thiola 98.7 6.7E-08 1.5E-12 104.1 11.1 93 177-270 72-166 (452)
97 PRK07851 acetyl-CoA acetyltran 98.7 8.1E-08 1.8E-12 102.3 11.0 92 177-270 28-122 (406)
98 PRK07516 acetyl-CoA acetyltran 98.7 6.1E-08 1.3E-12 102.7 9.8 92 177-270 23-117 (389)
99 PRK06158 thiolase; Provisional 98.7 5.3E-08 1.1E-12 103.0 9.2 86 177-267 29-115 (384)
100 PRK07910 3-oxoacyl-(acyl carri 98.7 3.2E-06 7E-11 90.5 22.9 186 100-301 12-254 (418)
101 PRK07850 acetyl-CoA acetyltran 98.7 1.1E-07 2.3E-12 100.7 11.0 94 176-270 26-121 (387)
102 PRK09050 beta-ketoadipyl CoA t 98.7 9.7E-08 2.1E-12 101.5 10.6 94 176-270 26-122 (401)
103 PRK06633 acetyl-CoA acetyltran 98.7 7.5E-08 1.6E-12 102.0 9.3 94 176-270 27-121 (392)
104 PRK08131 acetyl-CoA acetyltran 98.7 1.3E-07 2.8E-12 100.5 11.1 94 176-270 26-121 (401)
105 PRK06289 acetyl-CoA acetyltran 98.6 1.1E-07 2.4E-12 101.2 10.1 90 177-270 27-122 (403)
106 TIGR02430 pcaF beta-ketoadipyl 98.6 1.4E-07 3.1E-12 100.1 10.6 94 176-270 25-121 (400)
107 PRK06366 acetyl-CoA acetyltran 98.6 1.7E-07 3.6E-12 99.3 10.8 93 177-270 27-120 (388)
108 PF00109 ketoacyl-synt: Beta-k 98.6 1.1E-07 2.4E-12 94.0 8.6 120 175-299 86-251 (254)
109 TIGR02446 FadI fatty oxidation 98.6 1.6E-07 3.5E-12 100.7 9.8 94 176-270 31-125 (430)
110 PRK06504 acetyl-CoA acetyltran 98.6 3.1E-07 6.6E-12 97.4 11.0 94 176-270 26-121 (390)
111 PRK06157 acetyl-CoA acetyltran 98.5 3.8E-07 8.1E-12 97.0 10.9 92 177-270 28-120 (398)
112 PRK08947 fadA 3-ketoacyl-CoA t 98.5 3.1E-07 6.7E-12 97.3 10.0 94 176-270 27-123 (387)
113 PRK14691 3-oxoacyl-(acyl carri 98.5 3.6E-06 7.9E-11 87.7 16.9 119 176-301 4-174 (342)
114 PTZ00455 3-ketoacyl-CoA thiola 98.5 6.1E-07 1.3E-11 96.4 11.3 93 177-270 49-152 (438)
115 PRK06365 acetyl-CoA acetyltran 98.5 5.2E-07 1.1E-11 96.8 10.4 92 177-270 38-131 (430)
116 PRK06519 3-oxoacyl-(acyl carri 98.5 7.9E-06 1.7E-10 86.9 19.0 183 99-301 5-255 (398)
117 TIGR02445 fadA fatty oxidation 98.5 4.8E-07 1E-11 95.7 9.0 94 176-270 25-121 (385)
118 PRK09268 acetyl-CoA acetyltran 98.4 1.3E-06 2.8E-11 93.7 10.9 93 177-270 32-125 (427)
119 PRK07801 acetyl-CoA acetyltran 98.4 1.2E-06 2.7E-11 92.5 10.1 93 177-270 27-121 (382)
120 TIGR02813 omega_3_PfaA polyket 98.4 1.9E-05 4.1E-10 99.9 21.2 217 214-483 185-463 (2582)
121 PF07451 SpoVAD: Stage V sporu 98.3 2.8E-05 6E-10 78.2 16.1 116 178-302 53-175 (329)
122 PRK07937 lipid-transfer protei 98.2 0.00012 2.6E-09 76.7 19.6 88 178-269 26-114 (352)
123 PRK08142 acetyl-CoA acetyltran 98.1 1.1E-05 2.4E-10 85.5 9.6 87 177-268 26-112 (388)
124 COG0304 FabB 3-oxoacyl-(acyl-c 98.1 0.00018 3.9E-09 76.6 18.7 122 174-302 69-245 (412)
125 PRK07855 lipid-transfer protei 97.9 3.6E-05 7.8E-10 81.6 10.0 83 178-265 26-108 (386)
126 KOG1389 3-oxoacyl CoA thiolase 97.8 0.00025 5.5E-09 71.2 12.6 93 178-272 63-157 (435)
127 PRK06066 acetyl-CoA acetyltran 97.7 0.00017 3.7E-09 76.4 10.8 88 177-269 26-116 (385)
128 COG0183 PaaJ Acetyl-CoA acetyl 97.6 0.00023 5E-09 75.6 9.4 94 177-271 28-125 (392)
129 COG3321 Polyketide synthase mo 97.5 0.0032 6.9E-08 74.9 17.6 193 100-301 4-251 (1061)
130 KOG1390 Acetyl-CoA acetyltrans 97.4 0.00032 7E-09 70.8 7.2 94 176-270 30-124 (396)
131 KOG1406 Peroxisomal 3-ketoacyl 97.0 0.0017 3.7E-08 64.1 6.5 85 181-270 34-119 (408)
132 PF08540 HMG_CoA_synt_C: Hydro 96.5 0.0017 3.6E-08 65.9 3.2 59 425-483 143-203 (282)
133 KOG1394 3-oxoacyl-(acyl-carrie 95.8 0.039 8.5E-07 56.9 8.8 119 175-301 93-269 (440)
134 KOG1391 Acetyl-CoA acetyltrans 95.6 0.023 5E-07 56.1 5.9 91 177-270 29-123 (396)
135 PF08541 ACP_syn_III_C: 3-Oxoa 94.3 0.047 1E-06 45.3 3.6 76 188-267 1-79 (90)
136 PRK06025 acetyl-CoA acetyltran 94.1 0.17 3.6E-06 54.3 8.0 91 181-298 318-416 (417)
137 PRK06816 3-oxoacyl-(acyl carri 93.7 0.32 7E-06 51.4 9.3 90 174-267 268-365 (378)
138 TIGR00748 HMG_CoA_syn_Arc hydr 93.5 0.28 6.1E-06 51.2 8.5 82 177-264 207-293 (345)
139 PRK05963 3-oxoacyl-(acyl carri 93.1 0.24 5.2E-06 51.0 7.2 87 172-265 221-313 (326)
140 KOG1392 Acetyl-CoA acetyltrans 92.9 0.09 1.9E-06 52.7 3.4 93 177-270 67-160 (465)
141 PRK09258 3-oxoacyl-(acyl carri 92.7 0.37 8.1E-06 49.8 7.9 89 172-267 233-327 (338)
142 cd00825 decarbox_cond_enzymes 92.3 0.51 1.1E-05 48.3 8.3 77 179-255 206-286 (332)
143 PRK12879 3-oxoacyl-(acyl carri 91.7 0.72 1.6E-05 47.3 8.5 85 174-265 221-311 (325)
144 PRK07204 3-oxoacyl-(acyl carri 91.6 0.44 9.5E-06 49.1 6.9 84 174-264 226-315 (329)
145 TIGR00747 fabH 3-oxoacyl-(acyl 91.2 0.63 1.4E-05 47.6 7.4 85 174-265 215-305 (318)
146 PRK04262 hypothetical protein; 91.0 0.51 1.1E-05 49.2 6.7 68 178-249 209-281 (347)
147 PRK06840 hypothetical protein; 90.7 0.84 1.8E-05 47.3 7.9 81 178-265 237-322 (339)
148 PLN02326 3-oxoacyl-[acyl-carri 90.5 0.68 1.5E-05 49.0 7.1 85 174-265 276-366 (379)
149 cd00327 cond_enzymes Condensin 90.3 1.2 2.5E-05 43.6 8.2 76 180-255 147-226 (254)
150 PRK09352 3-oxoacyl-(acyl carri 90.0 1.2 2.6E-05 45.5 8.2 85 174-265 215-305 (319)
151 PRK13359 beta-ketoadipyl CoA t 89.9 1.1 2.5E-05 47.8 8.2 93 181-298 299-399 (400)
152 PRK09050 beta-ketoadipyl CoA t 89.7 1.3 2.8E-05 47.4 8.5 69 181-253 300-376 (401)
153 cd00830 KAS_III Ketoacyl-acyl 89.7 1.2 2.5E-05 45.4 7.9 86 173-265 218-309 (320)
154 PRK07515 3-oxoacyl-(acyl carri 89.6 1.1 2.3E-05 47.2 7.7 87 173-265 266-358 (372)
155 PF13723 Ketoacyl-synt_2: Beta 89.6 6.7 0.00015 38.4 12.7 114 176-301 34-172 (218)
156 CHL00203 fabH 3-oxoacyl-acyl-c 88.5 1.6 3.6E-05 44.9 8.0 83 176-265 224-312 (326)
157 TIGR02430 pcaF beta-ketoadipyl 88.1 1.5 3.2E-05 46.9 7.6 77 181-262 299-383 (400)
158 PRK06366 acetyl-CoA acetyltran 87.7 2.2 4.7E-05 45.4 8.5 74 181-262 288-370 (388)
159 PRK07661 acetyl-CoA acetyltran 87.7 2.4 5.1E-05 45.2 8.8 84 396-481 306-390 (391)
160 PRK06954 acetyl-CoA acetyltran 87.3 1.9 4.1E-05 46.0 7.8 84 396-481 312-396 (397)
161 PRK07850 acetyl-CoA acetyltran 86.9 3.3 7.2E-05 44.0 9.3 91 181-298 288-386 (387)
162 PRK09052 acetyl-CoA acetyltran 86.6 2.3 5E-05 45.4 8.0 92 180-298 299-398 (399)
163 PRK06147 3-oxoacyl-(acyl carri 86.6 1.4 3.1E-05 46.1 6.2 87 180-266 236-330 (348)
164 PRK06445 acetyl-CoA acetyltran 86.0 4.1 8.9E-05 43.4 9.5 67 180-252 294-368 (394)
165 PRK05790 putative acyltransfer 85.9 2.8 6.1E-05 44.5 8.2 84 396-480 308-391 (393)
166 PRK09051 beta-ketothiolase; Pr 85.5 3.4 7.4E-05 44.0 8.6 49 181-235 295-343 (394)
167 PRK07801 acetyl-CoA acetyltran 85.5 2.4 5.2E-05 44.9 7.4 84 396-480 297-380 (382)
168 PRK06504 acetyl-CoA acetyltran 85.1 3.3 7.2E-05 44.1 8.3 58 396-454 305-365 (390)
169 PRK06690 acetyl-CoA acetyltran 85.0 4.1 8.8E-05 43.0 8.8 75 180-261 260-342 (361)
170 COG0332 FabH 3-oxoacyl-[acyl-c 84.8 1.8 3.9E-05 44.9 5.9 88 171-264 216-308 (323)
171 PF02803 Thiolase_C: Thiolase, 84.5 3.3 7.2E-05 36.8 6.7 74 181-261 25-106 (123)
172 PRK07851 acetyl-CoA acetyltran 84.2 3.1 6.7E-05 44.5 7.6 85 396-481 320-404 (406)
173 PLN02287 3-ketoacyl-CoA thiola 84.2 3.9 8.5E-05 44.5 8.4 91 396-488 348-441 (452)
174 PRK05656 acetyl-CoA acetyltran 83.8 2.1 4.5E-05 45.6 6.1 49 181-235 294-342 (393)
175 TIGR01930 AcCoA-C-Actrans acet 83.8 2.4 5.2E-05 45.0 6.5 82 396-478 303-384 (386)
176 PRK08242 acetyl-CoA acetyltran 83.7 3.4 7.4E-05 44.2 7.6 54 396-450 317-370 (402)
177 cd00831 CHS_like Chalcone and 83.6 2.8 6.2E-05 43.8 6.9 89 173-265 254-350 (361)
178 PLN03169 chalcone synthase fam 81.6 4.8 0.0001 42.9 7.7 89 174-264 277-374 (391)
179 PRK06205 acetyl-CoA acetyltran 81.6 6 0.00013 42.3 8.5 85 396-482 315-403 (404)
180 PRK07108 acetyl-CoA acetyltran 81.3 4.2 9.1E-05 43.3 7.2 55 396-451 307-361 (392)
181 COG3425 PksG 3-hydroxy-3-methy 80.9 6.1 0.00013 41.7 8.0 82 177-264 208-296 (377)
182 PRK08257 acetyl-CoA acetyltran 80.6 4.6 0.0001 44.5 7.4 79 181-264 295-382 (498)
183 PRK08235 acetyl-CoA acetyltran 80.4 3.8 8.3E-05 43.6 6.5 83 396-480 308-391 (393)
184 PRK06633 acetyl-CoA acetyltran 79.3 7.4 0.00016 41.5 8.2 53 396-449 307-359 (392)
185 cd00827 init_cond_enzymes "ini 77.2 7.2 0.00016 39.7 7.2 92 172-267 217-315 (324)
186 cd00751 thiolase Thiolase are 77.1 8.3 0.00018 40.8 7.9 40 181-225 288-328 (386)
187 TIGR01835 HMG-CoA-S_prok 3-hyd 75.2 7 0.00015 41.4 6.6 75 173-248 200-286 (379)
188 PRK08947 fadA 3-ketoacyl-CoA t 75.0 14 0.0003 39.3 8.9 49 396-445 299-350 (387)
189 cd00829 SCP-x_thiolase Thiolas 74.7 10 0.00023 39.6 7.8 43 180-226 253-295 (375)
190 PF02801 Ketoacyl-synt_C: Beta 74.5 0.98 2.1E-05 39.5 0.0 75 181-255 28-110 (119)
191 PRK08963 fadI 3-ketoacyl-CoA t 74.2 14 0.00031 39.8 8.7 85 396-481 326-427 (428)
192 COG1214 Inactive homolog of me 73.8 9.3 0.0002 37.4 6.6 58 178-235 39-97 (220)
193 PRK12880 3-oxoacyl-(acyl carri 72.9 9.8 0.00021 39.9 7.0 77 174-257 238-318 (353)
194 TIGR01796 CM_mono_aroH monofun 72.6 10 0.00022 33.4 5.8 62 176-241 18-82 (117)
195 PRK09268 acetyl-CoA acetyltran 70.3 25 0.00054 38.0 9.5 25 180-204 311-335 (427)
196 cd00834 KAS_I_II Beta-ketoacyl 68.8 8.2 0.00018 40.7 5.4 76 180-255 277-358 (406)
197 PRK09185 3-oxoacyl-(acyl carri 68.7 16 0.00034 38.9 7.5 74 181-255 263-340 (392)
198 cd00826 nondecarbox_cond_enzym 68.6 13 0.00027 39.7 6.8 68 181-253 272-364 (393)
199 TIGR02445 fadA fatty oxidation 68.2 38 0.00082 36.0 10.3 82 396-481 297-384 (385)
200 PF01135 PCMT: Protein-L-isoas 67.7 7 0.00015 38.0 4.2 42 436-477 49-90 (209)
201 PRK06064 acetyl-CoA acetyltran 67.7 16 0.00036 38.6 7.4 40 181-225 261-301 (389)
202 COG4126 Hydantoin racemase [Am 66.3 34 0.00074 33.5 8.5 101 134-255 118-218 (230)
203 PRK07314 3-oxoacyl-(acyl carri 65.0 10 0.00023 40.2 5.3 44 181-224 279-323 (411)
204 PRK14691 3-oxoacyl-(acyl carri 64.9 16 0.00034 38.3 6.5 45 180-224 208-253 (342)
205 PRK12578 acetyl-CoA acetyltran 64.6 27 0.00059 36.9 8.3 57 396-453 274-348 (385)
206 cd00828 elong_cond_enzymes "el 64.5 12 0.00025 39.8 5.5 44 180-223 276-320 (407)
207 TIGR03725 bact_YeaZ universal 64.4 8.6 0.00019 36.9 4.1 36 177-212 34-69 (202)
208 PRK07516 acetyl-CoA acetyltran 64.0 14 0.0003 39.2 6.0 68 181-253 263-355 (389)
209 PRK06519 3-oxoacyl-(acyl carri 63.7 21 0.00045 38.2 7.3 44 180-224 282-326 (398)
210 KOG2708 Predicted metalloprote 63.0 26 0.00057 34.6 7.0 85 177-267 50-135 (336)
211 PLN02644 acetyl-CoA C-acetyltr 62.9 13 0.00029 39.5 5.7 66 181-252 294-367 (394)
212 TIGR03150 fabF beta-ketoacyl-a 62.6 15 0.00032 38.9 5.9 45 180-224 277-322 (407)
213 PRK07855 lipid-transfer protei 62.6 24 0.00053 37.5 7.5 24 181-204 269-292 (386)
214 PRK14878 UGMP family protein; 62.5 14 0.00031 38.2 5.6 52 172-224 41-97 (323)
215 PRK08256 lipid-transfer protei 62.3 22 0.00047 37.8 7.1 42 181-226 267-308 (391)
216 PRK06059 lipid-transfer protei 61.6 34 0.00074 36.4 8.4 42 181-226 276-317 (399)
217 PRK08131 acetyl-CoA acetyltran 61.3 27 0.00059 37.3 7.6 55 396-451 313-369 (401)
218 PF00814 Peptidase_M22: Glycop 61.1 13 0.00029 37.4 5.0 38 173-211 27-64 (268)
219 PTZ00050 3-oxoacyl-acyl carrie 60.9 23 0.0005 37.9 7.1 45 180-224 285-331 (421)
220 cd02185 AroH Chorismate mutase 60.8 20 0.00043 31.6 5.3 63 176-241 18-82 (117)
221 PRK09604 UGMP family protein; 60.6 32 0.00069 35.8 7.8 48 177-224 52-104 (332)
222 PRK06158 thiolase; Provisional 59.4 28 0.00061 36.9 7.3 40 181-225 257-297 (384)
223 TIGR00329 gcp_kae1 metallohydr 59.4 31 0.00068 35.3 7.5 34 178-211 50-83 (305)
224 smart00825 PKS_KS Beta-ketoacy 58.7 27 0.00059 37.1 7.1 45 180-224 281-326 (424)
225 cd00832 CLF Chain-length facto 58.3 18 0.00039 38.5 5.7 75 180-255 272-351 (399)
226 PTZ00455 3-ketoacyl-CoA thiola 57.8 27 0.00059 37.8 6.9 42 181-226 312-353 (438)
227 PLN02787 3-oxoacyl-[acyl-carri 57.6 24 0.00052 39.4 6.6 44 181-224 408-452 (540)
228 PRK08170 acetyl-CoA acetyltran 56.9 21 0.00045 38.5 5.9 25 180-204 309-333 (426)
229 COG0304 FabB 3-oxoacyl-(acyl-c 56.9 20 0.00042 38.6 5.6 43 181-223 279-322 (412)
230 PRK07937 lipid-transfer protei 56.0 37 0.0008 35.7 7.4 78 181-264 249-334 (352)
231 PRK05952 3-oxoacyl-(acyl carri 55.3 20 0.00043 38.1 5.3 44 180-223 256-300 (381)
232 PF07736 CM_1: Chorismate muta 55.0 34 0.00073 30.3 5.7 57 175-235 17-76 (118)
233 COG0533 QRI7 Metal-dependent p 54.6 40 0.00087 35.2 7.2 83 179-267 53-137 (342)
234 PRK06501 3-oxoacyl-(acyl carri 54.3 29 0.00064 37.3 6.5 44 180-223 291-335 (425)
235 TIGR02446 FadI fatty oxidation 53.9 42 0.00092 36.2 7.6 56 396-452 328-400 (430)
236 TIGR03722 arch_KAE1 universal 53.4 22 0.00047 36.8 5.1 36 172-208 42-77 (322)
237 PRK00768 nadE NAD synthetase; 53.0 2.4E+02 0.0052 28.5 12.3 150 120-294 3-179 (268)
238 KOG2707 Predicted metalloprote 52.9 37 0.00081 35.6 6.5 49 177-225 83-136 (405)
239 TIGR03723 bact_gcp putative gl 52.6 49 0.0011 34.1 7.6 35 177-211 50-84 (314)
240 PRK08313 acetyl-CoA acetyltran 52.5 58 0.0013 34.5 8.3 42 180-226 257-301 (386)
241 PRK08722 3-oxoacyl-(acyl carri 52.4 28 0.00061 37.3 6.0 45 180-224 280-325 (414)
242 PLN03170 chalcone synthase; Pr 52.4 54 0.0012 35.1 8.1 72 174-249 277-354 (401)
243 PF02803 Thiolase_C: Thiolase, 52.0 21 0.00046 31.7 4.1 83 396-480 39-122 (123)
244 PRK06365 acetyl-CoA acetyltran 50.6 68 0.0015 34.6 8.6 41 181-226 296-339 (430)
245 PRK06289 acetyl-CoA acetyltran 50.2 65 0.0014 34.3 8.3 42 180-226 278-320 (403)
246 cd00833 PKS polyketide synthas 49.7 34 0.00074 36.1 6.1 76 180-255 281-365 (421)
247 PRK09585 anmK anhydro-N-acetyl 49.4 43 0.00093 35.5 6.6 88 167-256 60-157 (365)
248 PRK09116 3-oxoacyl-(acyl carri 49.3 27 0.00058 37.3 5.2 43 181-223 278-321 (405)
249 PRK09605 bifunctional UGMP fam 49.0 29 0.00062 38.4 5.5 37 172-209 45-81 (535)
250 PRK07910 3-oxoacyl-(acyl carri 46.3 39 0.00085 36.3 5.9 45 180-224 288-333 (418)
251 PLN03173 chalcone synthase; Pr 46.1 72 0.0016 34.0 7.8 52 173-228 272-323 (391)
252 PRK06333 3-oxoacyl-(acyl carri 45.5 49 0.0011 35.3 6.5 44 180-223 290-334 (424)
253 PF00195 Chal_sti_synt_N: Chal 45.0 1E+02 0.0022 30.5 8.0 68 396-469 119-190 (226)
254 PLN02836 3-oxoacyl-[acyl-carri 44.4 94 0.002 33.5 8.5 44 180-223 301-345 (437)
255 PRK08142 acetyl-CoA acetyltran 43.9 75 0.0016 33.8 7.5 39 181-224 258-297 (388)
256 PLN03171 chalcone synthase-lik 42.9 80 0.0017 33.7 7.6 71 174-249 275-360 (399)
257 PRK06157 acetyl-CoA acetyltran 42.2 1.2E+02 0.0026 32.3 8.8 41 181-226 269-312 (398)
258 PRK06066 acetyl-CoA acetyltran 41.1 1.1E+02 0.0023 32.7 8.1 41 181-226 259-302 (385)
259 PRK08304 stage V sporulation p 40.7 1.1E+02 0.0023 32.1 7.8 89 180-270 210-315 (337)
260 PTZ00340 O-sialoglycoprotein e 39.8 59 0.0013 34.2 5.8 30 179-208 52-81 (345)
261 PRK12404 stage V sporulation p 39.6 1.2E+02 0.0027 31.5 7.9 89 180-270 208-313 (334)
262 PRK13410 molecular chaperone D 37.4 90 0.002 35.8 7.3 67 176-246 307-373 (668)
263 TIGR02435 CobG precorrin-3B sy 36.3 1.5E+02 0.0033 31.5 8.4 95 134-241 269-372 (390)
264 KOG1406 Peroxisomal 3-ketoacyl 36.0 34 0.00073 34.5 3.1 28 177-204 271-298 (408)
265 KOG1389 3-oxoacyl CoA thiolase 36.0 93 0.002 32.3 6.2 69 182-255 324-399 (435)
266 PLN03172 chalcone synthase fam 35.9 1.1E+02 0.0025 32.5 7.4 70 175-248 274-349 (393)
267 PF07451 SpoVAD: Stage V sporu 34.3 44 0.00096 34.4 3.7 99 165-268 193-307 (329)
268 COG2377 Predicted molecular ch 32.5 81 0.0018 33.3 5.3 68 167-234 62-141 (371)
269 TIGR02845 spore_V_AD stage V s 32.0 1.8E+02 0.0038 30.4 7.6 89 180-270 204-308 (327)
270 PRK05183 hscA chaperone protei 31.8 1.2E+02 0.0026 34.4 7.1 66 176-245 307-372 (616)
271 COG1153 FwdD Formylmethanofura 31.0 38 0.00083 30.0 2.3 52 442-500 31-88 (128)
272 TIGR01991 HscA Fe-S protein as 30.8 2.2E+02 0.0047 32.2 8.9 49 176-225 291-339 (599)
273 PLN03184 chloroplast Hsp70; Pr 30.5 1.3E+02 0.0029 34.4 7.3 66 177-246 345-410 (673)
274 COG2518 Pcm Protein-L-isoaspar 30.1 55 0.0012 31.9 3.5 38 436-475 51-88 (209)
275 CHL00094 dnaK heat shock prote 29.9 1.3E+02 0.0029 34.0 7.0 45 180-225 311-355 (621)
276 PRK07103 polyketide beta-ketoa 29.9 1.1E+02 0.0024 32.6 6.1 24 181-204 284-307 (410)
277 TIGR02350 prok_dnaK chaperone 29.8 1.1E+02 0.0025 34.2 6.5 68 175-246 302-369 (595)
278 PRK00290 dnaK molecular chaper 29.3 1.5E+02 0.0032 33.7 7.3 67 176-246 305-371 (627)
279 KOG1794 N-Acetylglucosamine ki 28.1 2.3E+02 0.0051 29.2 7.5 110 179-300 48-165 (336)
280 PTZ00186 heat shock 70 kDa pre 28.0 1.8E+02 0.0039 33.3 7.7 62 180-246 336-398 (657)
281 PRK13411 molecular chaperone D 26.8 1.4E+02 0.0031 34.1 6.6 47 177-224 307-353 (653)
282 PF04241 DUF423: Protein of un 26.4 3.4E+02 0.0073 22.5 7.2 33 19-51 10-42 (89)
283 PTZ00009 heat shock 70 kDa pro 25.0 1.8E+02 0.0039 33.3 7.0 64 180-246 315-378 (653)
284 KOG1394 3-oxoacyl-(acyl-carrie 24.7 84 0.0018 33.2 3.8 45 180-224 303-348 (440)
285 PTZ00400 DnaK-type molecular c 24.1 1.3E+02 0.0029 34.4 5.7 45 180-225 350-394 (663)
286 PRK08329 threonine synthase; V 23.9 68 0.0015 33.5 3.1 34 440-473 312-345 (347)
287 KOG1391 Acetyl-CoA acetyltrans 23.2 1E+02 0.0022 31.1 3.9 49 181-235 296-344 (396)
288 PF03702 UPF0075: Uncharacteri 22.3 94 0.002 32.9 3.8 74 169-242 59-144 (364)
289 KOG1202 Animal-type fatty acid 20.9 59 0.0013 39.5 2.0 125 177-302 88-248 (2376)
290 PLN02854 3-ketoacyl-CoA syntha 20.4 4.5E+02 0.0098 29.3 8.7 42 180-225 387-434 (521)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.9e-121 Score=975.38 Aligned_cols=503 Identities=90% Similarity=1.432 Sum_probs=481.6
Q ss_pred ccccCCCcCCCCCcccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHhhhhHHHHHHHHHHHH
Q 044260 9 SLIQPSCSRKLPDFKQSVKLKYVKLGYHYVITHGMYLFLSPLVALIAAQLSTFSIQDIYDLWEHLRFNFISVILCSTLLV 88 (511)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (511)
..+++++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|+..+|..+++++++++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (511)
T PLN02192 9 PLIEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLV 88 (511)
T ss_pred cccccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666899999999999999999999999999999999999998889999999999998899888888889888888888
Q ss_pred HHHHHHHHhCCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCcc
Q 044260 89 FLSTLYFLTRPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPC 168 (511)
Q Consensus 89 ~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ 168 (511)
+++++|+|+||++|||+||+||+|++++++|.+.++|+....|.|++++++||+||++|||+|++||+|+..++.|+..+
T Consensus 89 ~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~ 168 (511)
T PLN02192 89 FLSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPC 168 (511)
T ss_pred HHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHH
Q 044260 169 MAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLA 248 (511)
Q Consensus 169 ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA 248 (511)
|+++|+|+++++++|+++||+++|++|+|||+||++|++++++||++++|+++||+++++.+|||+||||+||++||++|
T Consensus 169 ~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA 248 (511)
T PLN02192 169 MAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLA 248 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccce
Q 044260 249 KDLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCV 328 (511)
Q Consensus 249 ~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v 328 (511)
+++|+++++++||||++|.+|.+||.++||+++++||+|||||||+||++++.++.+++|+|.+.++++.++|++.|+|+
T Consensus 249 ~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v 328 (511)
T PLN02192 249 KHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACV 328 (511)
T ss_pred HHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccce
Confidence 99999999999999999999999999999999999999999999999999765555678999999999999999999999
Q ss_pred eeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCc
Q 044260 329 TQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGG 408 (511)
Q Consensus 329 ~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g 408 (511)
++++|++|+.|+.|+||+|.++|++++.|++++||+++|.+|+.++++.|.++++|+.+++.|+|+++++|||||+||+|
T Consensus 329 ~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqgg 408 (511)
T PLN02192 329 TQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGG 408 (511)
T ss_pred ecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCC
Confidence 99999999999999999999999999999999999999999999888889999999988988999999999999999999
Q ss_pred hHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEecccCCC
Q 044260 409 RAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTINPA 488 (511)
Q Consensus 409 ~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~ 488 (511)
+++++.++++||++++++++|+++++|||||||+|+||+|++++++|++++||+|||+|||+||+||+++|||+|+++++
T Consensus 409 r~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~ 488 (511)
T PLN02192 409 RAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPA 488 (511)
T ss_pred HHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCCCCCCCC
Q 044260 489 KEKNPWMDEIHQFPVDVPKVSTI 511 (511)
Q Consensus 489 ~~~~~w~~~~~~~p~~~~~~~~~ 511 (511)
.+.|||+||||+|||++|.+..|
T Consensus 489 ~~~~~w~~~i~~yp~~~~~~~~~ 511 (511)
T PLN02192 489 KEKNPWMDEIHEFPVDVPKVSTI 511 (511)
T ss_pred ccCCCchhhHHhCCCCCCCCCCC
Confidence 42499999999999999987654
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.5e-118 Score=955.15 Aligned_cols=498 Identities=67% Similarity=1.125 Sum_probs=474.4
Q ss_pred ccccCCCcCCCCCcccccccchhhhhHHHHHHHH---HHHHHHHHHHHHHHHhcccChHHHHHHHHH--hhhhHHHHHHH
Q 044260 9 SLIQPSCSRKLPDFKQSVKLKYVKLGYHYVITHG---MYLFLSPLVALIAAQLSTFSIQDIYDLWEH--LRFNFISVILC 83 (511)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 83 (511)
+.+++++|++||||++|+|+||||+||||+++|+ ++++++|++++++.++.+++++|+..+|.. +++++++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (521)
T PLN02854 16 SSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELWSNQALHLDTATRLTG 95 (521)
T ss_pred cceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHH
Confidence 3677899999999999999999999999999999 677899998888999999999999889987 78888999998
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCC
Q 044260 84 STLLVFLSTLYFLTRPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRV 163 (511)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~ 163 (511)
++++++++++|+|+||++|||+||+||+|++++++|.+.++|+....|.|++++++||+||++|||+|++||+|+..+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~ 175 (521)
T PLN02854 96 SAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSR 175 (521)
T ss_pred HHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHH
Q 044260 164 PPNPCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLI 243 (511)
Q Consensus 164 ~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~ 243 (511)
|+..+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++||+|++|+++||+++++.+|||+||||+||++
T Consensus 176 ~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~ 255 (521)
T PLN02854 176 PPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLI 255 (521)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCC
Q 044260 244 SIDLAKDLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDK 323 (511)
Q Consensus 244 al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~ 323 (511)
||++|+++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.+++++++++|++
T Consensus 256 aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~ 335 (521)
T PLN02854 256 SIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDK 335 (521)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCC
Confidence 99999999999999999999999999999999999999999999999999999997644456789999999999999999
Q ss_pred cccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEE
Q 044260 324 CFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFC 403 (511)
Q Consensus 324 ~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~ 403 (511)
.|+|+++++|+.|..|+++++++|.+++++++.|++.+||.|+|.+|+++|+...+.+.+.+..++.|+|+|++||||||
T Consensus 336 ~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~ 415 (521)
T PLN02854 336 NYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFC 415 (521)
T ss_pred ccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEE
Confidence 99999999988888899999999999999999999999999999999999888887777777778888999999999999
Q ss_pred ecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEec
Q 044260 404 IHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
Q Consensus 404 ~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~ 483 (511)
+||+|++++++++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||+++|||+|
T Consensus 416 iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~ 495 (521)
T PLN02854 416 IHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALR 495 (521)
T ss_pred ECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC--CCCCCcccccccCCCCCCC
Q 044260 484 TINPA--KEKNPWMDEIHQFPVDVPK 507 (511)
Q Consensus 484 ~~~~~--~~~~~w~~~~~~~p~~~~~ 507 (511)
++++. . +|||+||||+|||++|+
T Consensus 496 ~~~~~~~~-~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 496 EIPTGEST-GNPWADSIDRYPVKVPV 520 (521)
T ss_pred cCCccccC-CCCchhhHhhCCCCCCC
Confidence 99865 5 69999999999999875
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.8e-116 Score=937.89 Aligned_cols=497 Identities=67% Similarity=1.143 Sum_probs=473.7
Q ss_pred cccccCCCcCCCCCcccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHhhhhHHHHHHHHHHH
Q 044260 8 KSLIQPSCSRKLPDFKQSVKLKYVKLGYHYVITHGMYLFLSPLVALIAAQLSTFSIQDIYDLWEHLRFNFISVILCSTLL 87 (511)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (511)
..+++|++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++.+|+..+|..+++++++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (502)
T PLN02377 4 GGEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFL 83 (502)
T ss_pred CceEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999888999999999999889988888888888888888
Q ss_pred HHHHHHHHHhCCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCc
Q 044260 88 VFLSTLYFLTRPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNP 167 (511)
Q Consensus 88 ~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~ 167 (511)
++++++|+|+||++|||+||+||+|++++++|.+.++|+.+..|.|++++++||+||++++||++++|.|+..++.|+..
T Consensus 84 ~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~ 163 (502)
T PLN02377 84 VFGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRP 163 (502)
T ss_pred HHHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHH
Q 044260 168 CMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDL 247 (511)
Q Consensus 168 ~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~l 247 (511)
+|+++++|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++
T Consensus 164 ~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~l 243 (502)
T PLN02377 164 SMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDL 243 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHH
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccc
Q 044260 248 AKDLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSC 327 (511)
Q Consensus 248 A~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~ 327 (511)
|+++++++++++||||++|.+|.+|+.+++++++++|++|||||||+||++++.++++++|++.++++++.++|++.|+|
T Consensus 244 A~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~ 323 (502)
T PLN02377 244 AKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRC 323 (502)
T ss_pred HHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccce
Confidence 99999999999999999999999998888889999999999999999999976555567899999999999999999999
Q ss_pred eeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCC
Q 044260 328 VTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAG 407 (511)
Q Consensus 328 v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~ 407 (511)
+++++|+.|+.|+++++++|.++|++++.|++.+||.|+|.+|++.++.....+++++..++++.|++++||||||+||+
T Consensus 324 i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqg 403 (502)
T PLN02377 324 VYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAG 403 (502)
T ss_pred eeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCC
Confidence 99999988989999999999999999999999999999999999988777777888887777777889999999999999
Q ss_pred chHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEecccCC
Q 044260 408 GRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTINP 487 (511)
Q Consensus 408 g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~ 487 (511)
|++++++++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||+++|||+|++++
T Consensus 404 gr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~ 483 (502)
T PLN02377 404 GRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKP 483 (502)
T ss_pred CHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcccccccCCCCC
Q 044260 488 AKEKNPWMDEIHQFPVDV 505 (511)
Q Consensus 488 ~~~~~~w~~~~~~~p~~~ 505 (511)
+. +|||+||||+|||++
T Consensus 484 ~~-~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 484 SN-NSPWEDCIDKYPVKL 500 (502)
T ss_pred CC-CCCchhhHhhCCCcc
Confidence 76 799999999999974
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.7e-109 Score=879.58 Aligned_cols=469 Identities=59% Similarity=0.988 Sum_probs=447.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEeEEcCCCC
Q 044260 36 HYVITHGMYLFLSPLVALIAAQLSTFSIQDIYDLWEHLRFNFISVILCSTLLVFLSTLYFLTRPQPVYLVNFACYKPEDA 115 (511)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~ 115 (511)
.|+++|+++++++|++++++.++.+++.+|++.+|..++.++++++.+++++++++++|+|+||++|||+||+||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999998889999999999998899888888888888888888889999999999999999999999999
Q ss_pred ceecHHHHHHHhccc---CCCChhh---HHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHHHHHHHHHHH
Q 044260 116 RKCTRQIFMERSGLT---GTFSQEN---LDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVMFGALDELFA 189 (511)
Q Consensus 116 ~~vt~ee~~~~~~~~---~~~~~~~---~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~ 189 (511)
+++|.+.++++.... |.|++++ ++||+||++||||++|||+|+..++.|+..+|+++++|+++++++|+++||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 161 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFR 161 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998655 7898888 9999999999999999999999888888889999999999999999999999
Q ss_pred hCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCC
Q 044260 190 KTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENIT 269 (511)
Q Consensus 190 ~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s 269 (511)
++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.+|
T Consensus 162 ~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S 241 (478)
T PLN02932 162 NTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT 241 (478)
T ss_pred HcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc
Confidence 99999999999999998888999999999999999989999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCcccccchhhHHH
Q 044260 270 LNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIGVSLSKDLMAV 349 (511)
Q Consensus 270 ~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g~~ls~d~~~~ 349 (511)
.+||.+++|++++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|+++++|++|..|+.|+|++|.+
T Consensus 242 ~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~ 321 (478)
T PLN02932 242 QNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMV 321 (478)
T ss_pred cccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHH
Confidence 99998888999999999999999999999775444679999999999999999999999999998898999999999999
Q ss_pred HhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHHcCCCcccccch
Q 044260 350 AGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPS 429 (511)
Q Consensus 350 ~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S 429 (511)
++++++.|++++||.|+|++|++++++++.++++++.+.+.+.++++++|||||+||+|++++++++++||++++++|+|
T Consensus 322 ~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s 401 (478)
T PLN02932 322 AARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEAS 401 (478)
T ss_pred HHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHH
Confidence 99999999999999999999999999999999999988888889999999999999999999999999999999999999
Q ss_pred hhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEecccCCCCCCCCcccccccCCCCC
Q 044260 430 RMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTINPAKEKNPWMDEIHQFPVDV 505 (511)
Q Consensus 430 ~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~~~~~~w~~~~~~~p~~~ 505 (511)
+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||++|++++.. +|||+||||+|||++
T Consensus 402 ~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~-~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 402 RMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSA-NNPWEDCLHKYPVEI 476 (478)
T ss_pred HHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcC-CCCchhhHhhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998876 799999999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.6e-100 Score=799.52 Aligned_cols=429 Identities=59% Similarity=1.034 Sum_probs=404.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEee
Q 044260 77 FISVILCSTLLVFLSTLYFLTRPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYL 156 (511)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~ 156 (511)
+..+-+.+.++++++++|+++||++||++||+||+|++++++|.+.++|+....|.|++++++||+||+++|||++++|.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~ 114 (466)
T PLN00415 35 PFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYS 114 (466)
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeee
Confidence 33344444555666788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC
Q 044260 157 PEAVLRVPPNPCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGM 236 (511)
Q Consensus 157 ~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~ 236 (511)
|+..+..|+..+|+++|+|+++.++.|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||
T Consensus 115 p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gm 194 (466)
T PLN00415 115 PRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGM 194 (466)
T ss_pred CCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccc
Confidence 99999888888999999999999999999999999999999999999898888999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEee
Q 044260 237 GCSAGLISIDLAKDLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRT 316 (511)
Q Consensus 237 gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t 316 (511)
||+|+++||++|+++++++++++||||++|.+|.++|+++|++++++|++|||||||+||++++.++.+++|+|.+++++
T Consensus 195 GCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt 274 (466)
T PLN00415 195 GCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRT 274 (466)
T ss_pred cchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEe
Confidence 99999999999999999999999999999999998889999999999999999999999999876655689999999999
Q ss_pred EecCCCCcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhccccccccc
Q 044260 317 HKGADDKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFK 396 (511)
Q Consensus 317 ~~~~d~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~ 396 (511)
+.+.+++.|.|+++.+|++|..|+.|+|++|.+++++++.|+++++|+++|++|++++....++++.++...+.|+|+++
T Consensus 275 ~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~ 354 (466)
T PLN00415 275 HKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFK 354 (466)
T ss_pred cCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999998888899988877788899998
Q ss_pred ccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhh
Q 044260 397 LAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNS 476 (511)
Q Consensus 397 ~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s 476 (511)
..++|||+|+||++|+|+++++|||+++++++|+++|+|||||||+|+||+|+++++++++++||++||+|||+||+|++
T Consensus 355 ~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es 434 (466)
T PLN00415 355 LCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNS 434 (466)
T ss_pred ccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheEEecccCCCCC--CCCcccccccCCCCC
Q 044260 477 AVWKALRTINPAKE--KNPWMDEIHQFPVDV 505 (511)
Q Consensus 477 ~v~r~~~~~~~~~~--~~~w~~~~~~~p~~~ 505 (511)
+||||+|+++++.. .|||+||||+|||++
T Consensus 435 ~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 435 IVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred hHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 99999999987541 399999999999974
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=6e-78 Score=596.23 Aligned_cols=290 Identities=70% Similarity=1.151 Sum_probs=284.2
Q ss_pred HHHhCCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHH
Q 044260 94 YFLTRPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEAR 173 (511)
Q Consensus 94 ~~~~~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~ 173 (511)
|+|+|+++|||+||+||+|++++++|.++++++++..+.|++++++||+||+++|||+++||+|+..+..|+..+|++++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
+|++++++.|++++|+++|++|+|||+||+|||.|+|+||+++||+|+|||++++.+|||+||||+|++++|++|+++|+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccC
Q 044260 254 VHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQED 333 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d 333 (511)
.+|+++||||++|++|.+||.|+||+|+++||+|||||||+||||++.+++++||+|.|+||||+++||++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred CCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHH
Q 044260 334 PTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKV 383 (511)
Q Consensus 334 ~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v 383 (511)
++|+.|+.|+||++.++|++++.||++|||+|||++|+++|+++++.||+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999998887763
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=3.9e-55 Score=444.09 Aligned_cols=311 Identities=22% Similarity=0.311 Sum_probs=262.4
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECV 179 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 179 (511)
.+++|.++|+|+|+ ++++|+++.+.... ++|| |..++||++||++.+++. .++|+
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sdew------I~~rtGir~R~~a~~~e~----~s~la--------- 56 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDEW------IETRTGIRERRIAADDET----TSDLA--------- 56 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccce------eeeecCCceeeecCCCcc----HHHHH---------
Confidence 46899999999999 99999999866654 7887 889999999999987763 56666
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNS 258 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~ 258 (511)
++|+++||+++|++|+|||+||++| +|+++.|++|++||++||+. ++.+||++ .+|+|+++||++|.+++++|..+
T Consensus 57 -~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 57 -VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999996 68899999999999999999 59999999 69999999999999999999999
Q ss_pred eEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCc
Q 044260 259 YALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRI 338 (511)
Q Consensus 259 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~ 338 (511)
+||||++|++|+ +.+++||.+ ..+|||||+|+||++.+.+. ++..+.+++|+..+++++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 678899975 47999999999999987332 46678889999988777765432110
Q ss_pred ccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccc----------cccccccccEEEecCCc
Q 044260 339 GVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPY----------IPDFKLAFEHFCIHAGG 408 (511)
Q Consensus 339 g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~----------~~~~~~did~~~~H~~g 408 (511)
.+. ... ..++.|.+|++|+.+++.+ ....++|||||++||.|
T Consensus 201 ----~~~------~~~------------------~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan 252 (323)
T COG0332 201 ----PKE------ESG------------------GGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQAN 252 (323)
T ss_pred ----ccc------ccc------------------ccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccccc
Confidence 000 000 0112344555554433221 12236899999999999
Q ss_pred hHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEe
Q 044260 409 RAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKAL 482 (511)
Q Consensus 409 ~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~ 482 (511)
.++++.+.++||++++|+ ..++++|||||++|+|+.|+.+.++|++|+||+|++.+||+|++|+++++||.
T Consensus 253 ~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 253 LRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999999999999999 68999999999999999999999999999999999999999999999999984
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=3.6e-51 Score=429.99 Aligned_cols=348 Identities=18% Similarity=0.225 Sum_probs=270.8
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCC-ChhhHHH-HHHHHHHhCCCcEEeecCc----ccC-----C-CC-C
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTF-SQENLDF-QRKILERSGLGESTYLPEA----VLR-----V-PP-N 166 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~-~~~~~~f-~~ri~~~sGi~~r~~~~~~----~~~-----~-~~-~ 166 (511)
.+++|.++|+..|+ +.++++|+.+.+...... +...++. +++|++++||++|+..-+. ++. . |+ .
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 46899999999999 999999999977642210 1122333 5779999999999875421 110 0 11 3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE-EecCCCchHHHHHH
Q 044260 167 PCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSY-NLGGMGCSAGLISI 245 (511)
Q Consensus 167 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~-dl~g~gCsggl~al 245 (511)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.++ +++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 35667889999999999999999999999999999988765555999999999999999778665 555 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCCCCcCCCC--cchhhhhcccccccEEEEEeccCCcc-ccccceeeeEEeeEe-cCC
Q 044260 246 DLAKDLLQVHPNSYALVISMENITLNWYFGNE--RSMLVSNCLFRMGGAAILLSNKRSDR-WRSKYRLVHTVRTHK-GAD 321 (511)
Q Consensus 246 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lFgDGAaA~lLs~~~~~~-~~~~~~L~~~v~t~~-~~d 321 (511)
++|++++++++.++||||++|.+|.++.+++| ++.++++++|||||+|+||++.+... .++.|++.+...++. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999999999999999999976655555 34667889999999999999865421 234577776644443 344
Q ss_pred CCcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccE
Q 044260 322 DKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEH 401 (511)
Q Consensus 322 ~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~ 401 (511)
+.....+.. +++++.+++++|..+.+.+...+ +++++.. .....|+++
T Consensus 252 ~~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~-----gl~~~di~~ 299 (393)
T PLN03172 252 GAIDGHLRE-----VGLTFHLLKDVPGLISKNIEKSL----------------------VEAFAPI-----GINDWNSIF 299 (393)
T ss_pred ccccceEEc-----CCcEEEEechHHHHHHHHHHHHH----------------------HHHhhhc-----CCCccccce
Confidence 432222221 23456788999987665433222 1222211 111479999
Q ss_pred EEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEeeChHHHH
Q 044260 402 FCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRIKRG---DRTWQIAFGSGFKC 474 (511)
Q Consensus 402 ~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~----~~g~l~~G---d~VlliafGsG~~~ 474 (511)
|++||+|+++++.+++.||++++++.+|+++|++||||||+|+++.|+++. ++|++++| |++++++||+||++
T Consensus 300 ~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~ 379 (393)
T PLN03172 300 WIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTV 379 (393)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCccee
Confidence 999999999999999999999999999999999999999999999999986 45788787 89999999999999
Q ss_pred hhhheEEe
Q 044260 475 NSAVWKAL 482 (511)
Q Consensus 475 ~s~v~r~~ 482 (511)
+++++||.
T Consensus 380 ~~~ll~~~ 387 (393)
T PLN03172 380 ETVVLHSV 387 (393)
T ss_pred eeeeeEec
Confidence 99999995
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=2.9e-51 Score=427.51 Aligned_cols=344 Identities=40% Similarity=0.605 Sum_probs=266.0
Q ss_pred cEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEEeecC--cccC-------CCCCccHH
Q 044260 102 VYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGESTYLPE--AVLR-------VPPNPCMA 170 (511)
Q Consensus 102 v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~--~~~~-------~~~~~~ma 170 (511)
++|.+++.|+|+ ++++|+++.+.+..... +.+...+++++|++++||++|+++.+ ++.. .+.....+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 789999999999 89999999998763211 01234556678999999999999865 3311 11234567
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHH
Q 044260 171 EARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 171 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~ 250 (511)
.+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 78899999999999999999999999999999998877889999999999999997899999997799999999999999
Q ss_pred HHhcCCCCeEEEEEeccCCCCCcCCCC-cchhhhhcccccccEEEEEeccCCccc--cccceeeeEEeeEecCCCCcccc
Q 044260 251 LLQVHPNSYALVISMENITLNWYFGNE-RSMLVSNCLFRMGGAAILLSNKRSDRW--RSKYRLVHTVRTHKGADDKCFSC 327 (511)
Q Consensus 251 lL~~~~~~~aLVVs~E~~s~~~~~~~d-r~~lv~~~lFgDGAaA~lLs~~~~~~~--~~~~~L~~~v~t~~~~d~~~~~~ 327 (511)
++++++.++||||++|..|. +++++| +.+.+++++|||||+|+||++++.... ...+++.+......+..+....
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~- 237 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMG- 237 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCceE-
Confidence 99999999999999999988 667677 777777899999999999998765321 1234443332211111110000
Q ss_pred eeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhccccc--ccccccccEEEec
Q 044260 328 VTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYI--PDFKLAFEHFCIH 405 (511)
Q Consensus 328 v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~--~~~~~did~~~~H 405 (511)
+... .....+.++++++....+. ..+.++..+++ . +...+|||||++|
T Consensus 238 -~~~~--~~~~~~~~~~~v~~~~~~~--------------------------~~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 238 -WHLG--EEGLTFVLSRDVPRLVEKN--------------------------LERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred -EEEE--cceEEEEeChhHHHHHHHH--------------------------HHHHHHHHhcc-ccCCCccccceEEEEC
Confidence 0000 0112222333333222111 12222333332 2 3346899999999
Q ss_pred CCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhhe
Q 044260 406 AGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVW 479 (511)
Q Consensus 406 ~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 479 (511)
|+|+++++.+++.||++++++++|+.++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999987
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=2.8e-50 Score=423.17 Aligned_cols=350 Identities=17% Similarity=0.213 Sum_probs=261.4
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEEeecCcc----cC------CCC-C
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGESTYLPEAV----LR------VPP-N 166 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~~~----~~------~~~-~ 166 (511)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+-++||++++||+.|+..-+.+ +. .|+ .
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 46899999999999 99999999997754321 0122233357899999999998753221 10 011 3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eEEEecCCCchHHHHHH
Q 044260 167 PCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-VSYNLGGMGCSAGLISI 245 (511)
Q Consensus 167 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsggl~al 245 (511)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++.+..|+++++|+++||+++++ +++|++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 34667899999999999999999999999999999999765566899999999999999765 478888 7999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCCCCcCCC--CcchhhhhcccccccEEEEEeccCCcc-ccccceeeeEEeeEec-CC
Q 044260 246 DLAKDLLQVHPNSYALVISMENITLNWYFGN--ERSMLVSNCLFRMGGAAILLSNKRSDR-WRSKYRLVHTVRTHKG-AD 321 (511)
Q Consensus 246 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~--dr~~lv~~~lFgDGAaA~lLs~~~~~~-~~~~~~L~~~v~t~~~-~d 321 (511)
++|++++++++.++||||++|.+|.++.... +.+.++++++|||||+|+||++++... .++.+++.....+... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998654322 244567789999999999999865321 1123444322222222 22
Q ss_pred CCcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccE
Q 044260 322 DKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEH 401 (511)
Q Consensus 322 ~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~ 401 (511)
+. .. ... + +.++.+.+++++|....+.++. +++..++. ......|+++
T Consensus 251 ~~-~~-~~~--~-~~g~~~~l~~~vp~~i~~~~~~--------------------------~l~~~l~~-~~~~~~d~~~ 298 (389)
T PLN03168 251 GA-ID-GHL--T-EAGLIFHLMKDVPGLISKNIEK--------------------------FLNEARKC-VGSPDWNEMF 298 (389)
T ss_pred Cc-cC-ceE--e-cCceEEEECHHHHHHHHHHHHH--------------------------HHHHHHHh-cCCCccccce
Confidence 21 00 001 1 1223456677777655432221 11111111 1111357789
Q ss_pred EEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCC--------CEEEEEeeChHHH
Q 044260 402 FCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRG--------DRTWQIAFGSGFK 473 (511)
Q Consensus 402 ~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~G--------d~VlliafGsG~~ 473 (511)
|++||+|++|++.++++|||++|++..|+.++++||||||+|+++.|+++.++ ++++| |+++++|||+||+
T Consensus 299 ~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t 377 (389)
T PLN03168 299 WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLT 377 (389)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhh
Confidence 99999999999999999999999999899999999999999999999998865 66655 8999999999999
Q ss_pred HhhhheEEeccc
Q 044260 474 CNSAVWKALRTI 485 (511)
Q Consensus 474 ~~s~v~r~~~~~ 485 (511)
|+++++||..++
T Consensus 378 ~~~~llr~~~~~ 389 (389)
T PLN03168 378 LEVLVLRAAANV 389 (389)
T ss_pred hhhhhheecccC
Confidence 999999997653
No 11
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=6.9e-50 Score=420.86 Aligned_cols=352 Identities=19% Similarity=0.251 Sum_probs=260.6
Q ss_pred HhCCCCcEEEEEeEEcCCCCceecHHHHHHHhcc-cCCCChhhHH-HHHHHHHHhCCCcEEeecCcc----c---CCCC-
Q 044260 96 LTRPQPVYLVNFACYKPEDARKCTRQIFMERSGL-TGTFSQENLD-FQRKILERSGLGESTYLPEAV----L---RVPP- 165 (511)
Q Consensus 96 ~~~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~-~~~~~~~~~~-f~~ri~~~sGi~~r~~~~~~~----~---~~~~- 165 (511)
.+.|.+++|.++|+++|+ ++++|+++.+.+.. .+. ++++++ .+++|++++||++|+++.+++ + ..+.
T Consensus 16 ~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 16 AANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKC-DDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred cCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcc-cCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 456788999999999999 99999999985432 211 234433 357899999999999874211 0 0011
Q ss_pred ---CccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eEEEecCCCchHH
Q 044260 166 ---NPCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-VSYNLGGMGCSAG 241 (511)
Q Consensus 166 ---~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsgg 241 (511)
...+..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ .++|++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 123344678899999999999999999999999999999888999999999999999998776 479999 799999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEeccCCCCCcCCC-C-cchhhhhcccccccEEEEEeccCCcc-ccccceeeeEEeeEe
Q 044260 242 LISIDLAKDLLQVHPNSYALVISMENITLNWYFGN-E-RSMLVSNCLFRMGGAAILLSNKRSDR-WRSKYRLVHTVRTHK 318 (511)
Q Consensus 242 l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~-d-r~~lv~~~lFgDGAaA~lLs~~~~~~-~~~~~~L~~~v~t~~ 318 (511)
++||++|.+++++++.++||||++|..|.++.... + ....+++++|||||+|+||++++... ....+++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887553211 1 22345678999999999999865421 112333322211111
Q ss_pred cCCCCcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhccccccccccc
Q 044260 319 GADDKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLA 398 (511)
Q Consensus 319 ~~d~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~d 398 (511)
...+...+. .... .++.+.+++++|..+.+.+... .+++++. .+...+|
T Consensus 252 p~~~~~~~~---~~~~-~g~~~~~g~~v~~~~~~~~~~~----------------------i~~~L~~-----~gl~~~d 300 (391)
T PLN03169 252 PGTEKTIDG---RLTE-EGINFKLGRELPQKIEDNIEGF----------------------CKKLMKK-----AGLVEKD 300 (391)
T ss_pred CCCccccCc---eecC-CceEEEECcHHHHHHHHHHHHH----------------------HHHHHHH-----cCCCCCC
Confidence 111111100 0011 1123455666666543322111 1223321 1112357
Q ss_pred cc--EEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCC---CCCEEEEEeeChHHH
Q 044260 399 FE--HFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIK---RGDRTWQIAFGSGFK 473 (511)
Q Consensus 399 id--~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~---~Gd~VlliafGsG~~ 473 (511)
+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|++++++++++ +||++++++||+||+
T Consensus 301 id~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s 380 (391)
T PLN03169 301 YNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGIT 380 (391)
T ss_pred CCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHh
Confidence 88 9999999999999999999999999988889999999999999999999999888876 699999999999999
Q ss_pred HhhhheEEe
Q 044260 474 CNSAVWKAL 482 (511)
Q Consensus 474 ~~s~v~r~~ 482 (511)
|+++++||.
T Consensus 381 ~~~~ll~~~ 389 (391)
T PLN03169 381 FEGILARNL 389 (391)
T ss_pred HHHHHHhhh
Confidence 999999984
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=7.3e-50 Score=419.85 Aligned_cols=350 Identities=19% Similarity=0.219 Sum_probs=267.2
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEEeecCcc----c---CC---C-CC
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGESTYLPEAV----L---RV---P-PN 166 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~~~----~---~~---~-~~ 166 (511)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+.++||++++||+.|+..-+.+ + .. | ..
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 46899999999999 99999999998764321 1222233368899999999998654211 1 11 1 13
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHH
Q 044260 167 PCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISID 246 (511)
Q Consensus 167 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 246 (511)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++..+.+.++||+|++.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHH
Confidence 34667899999999999999999999999999999998765555899999999999999777655444489999999999
Q ss_pred HHHHHHhcCCCCeEEEEEeccCCCCCcCCCCc--chhhhhcccccccEEEEEeccCCcc-ccccceeeeEEeeEe-cCCC
Q 044260 247 LAKDLLQVHPNSYALVISMENITLNWYFGNER--SMLVSNCLFRMGGAAILLSNKRSDR-WRSKYRLVHTVRTHK-GADD 322 (511)
Q Consensus 247 lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr--~~lv~~~lFgDGAaA~lLs~~~~~~-~~~~~~L~~~v~t~~-~~d~ 322 (511)
+|++++++++.++||||++|.+|.++++++|+ +.++++++|||||+|+||++.+... .++.|++.+...+.. .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 99999999999999999999999766665553 4567889999999999999754321 124577765544333 3343
Q ss_pred CcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEE
Q 044260 323 KCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHF 402 (511)
Q Consensus 323 ~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~ 402 (511)
. +..-... +++.+.+++++|..+.+.+...+ +++++.. +....|+|+|
T Consensus 253 ~-~~~~i~~----~G~~~~l~~~vp~~~~~~~~~~i----------------------~~~L~~~-----gl~~~di~~~ 300 (391)
T PLN03173 253 A-IDGHLRE----VGLTFHLLKDVPGLISKNVEKSL----------------------TEAFKPL-----GISDWNSLFW 300 (391)
T ss_pred c-eeeEEEc----CceEEEEecHHHHHHHHHHHHHH----------------------HHHHHhc-----CCCccccCeE
Confidence 3 2211111 23456788888887654332211 2233221 1124799999
Q ss_pred EecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHc----CCCCCC---CEEEEEeeChHHHHh
Q 044260 403 CIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKRG---DRTWQIAFGSGFKCN 475 (511)
Q Consensus 403 ~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~----g~l~~G---d~VlliafGsG~~~~ 475 (511)
++||+|+++++.+++.|||+++++.+|++++++||||||+|+++.|+++.++ |.+++| ++++++|||+||+++
T Consensus 301 v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e 380 (391)
T PLN03173 301 IAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVE 380 (391)
T ss_pred EECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHH
Confidence 9999999999999999999999999999999999999999999999999853 444443 889999999999999
Q ss_pred hhheEEec
Q 044260 476 SAVWKALR 483 (511)
Q Consensus 476 s~v~r~~~ 483 (511)
+++++|..
T Consensus 381 ~~ll~~~~ 388 (391)
T PLN03173 381 TVVLHSVA 388 (391)
T ss_pred HHHHhhcc
Confidence 99999854
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1.4e-48 Score=411.86 Aligned_cols=353 Identities=17% Similarity=0.207 Sum_probs=259.2
Q ss_pred CCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhh---HHHHHHHHHHhCCCcEEeecCcc----------cCC-C
Q 044260 99 PQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQEN---LDFQRKILERSGLGESTYLPEAV----------LRV-P 164 (511)
Q Consensus 99 ~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~---~~f~~ri~~~sGi~~r~~~~~~~----------~~~-~ 164 (511)
+.+++|+++|+|+|+ ++++|+++.+++..... ++++ .+.+++|++++||++||++.+++ ... .
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 357999999999999 99999999997432100 2222 22346799999999999986542 001 1
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce-EEEecCCCchHHHH
Q 044260 165 PNPCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIV-SYNLGGMGCSAGLI 243 (511)
Q Consensus 165 ~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~-~~dl~g~gCsggl~ 243 (511)
....+..+.+.+.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++. ++++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 13346678889999999999999999999999999999997654458999999999999996653 56666 69999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCCCCCcCCCCc---chhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecC
Q 044260 244 SIDLAKDLLQVHPNSYALVISMENITLNWYFGNER---SMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGA 320 (511)
Q Consensus 244 al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr---~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~ 320 (511)
||++|.+++++++.++||||++|.+|.. +++.|+ ..++++++|||||+|+||++.++...+..+++.+.....
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 9999999999999999999999999984 444444 345567899999999999986643222345665433222
Q ss_pred CCCcccceeeccCCCCCcccccc-hhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccc
Q 044260 321 DDKCFSCVTQQEDPTGRIGVSLS-KDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAF 399 (511)
Q Consensus 321 d~~~~~~v~~~~d~~g~~g~~ls-~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~di 399 (511)
++...+.+....++ ++.-..++ +.+|....+.++..+. +.+...+..-.....+|+
T Consensus 252 ~p~~~~~~~~~~~~-~g~~~~~~~~~vp~~i~~~l~~~l~----------------------~~l~~~~~~~~g~~~~di 308 (399)
T PLN03171 252 IPESDDAINMHFTE-GGLDGNIGTRQVPGLIGDNIERCLL----------------------DAFAPLLGGDGGAEWNDL 308 (399)
T ss_pred ecCCchheEEEEEc-CCceEEECchhHHHHHHHHHHHHHH----------------------HHHHhhcccccCCCcccc
Confidence 33333333221111 12212344 5666555443322111 111100000001124678
Q ss_pred cEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCC--CCCC---CEEEEEeeChHHHH
Q 044260 400 EHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGR--IKRG---DRTWQIAFGSGFKC 474 (511)
Q Consensus 400 d~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~--l~~G---d~VlliafGsG~~~ 474 (511)
+|+ +||+|+++++.+++.||++++|+..|+.++++||||||+|+|+.|+++.++++ +++| |++++++||+|++|
T Consensus 309 ~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~ 387 (399)
T PLN03171 309 FWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTV 387 (399)
T ss_pred eEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHH
Confidence 766 69999999999999999999999888899999999999999999999988764 6888 99999999999999
Q ss_pred hhhheEEec
Q 044260 475 NSAVWKALR 483 (511)
Q Consensus 475 ~s~v~r~~~ 483 (511)
++++|++.+
T Consensus 388 ~~~ll~~~~ 396 (399)
T PLN03171 388 DAMLLHASG 396 (399)
T ss_pred HHHHhhccc
Confidence 999999965
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=8.6e-49 Score=413.19 Aligned_cols=350 Identities=18% Similarity=0.217 Sum_probs=264.8
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCC-ChhhHHH-HHHHHHHhCCCcEEeecCcc----cCC------CC-C
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTF-SQENLDF-QRKILERSGLGESTYLPEAV----LRV------PP-N 166 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~-~~~~~~f-~~ri~~~sGi~~r~~~~~~~----~~~------~~-~ 166 (511)
.+.+|.++|+..|+ +.++++++.+.+...... +....+. ++||++++||+.|+..-+++ +.. |+ .
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 999999999987653210 1122333 68899999999998754211 100 11 3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eEEEecCCCchHHHHHH
Q 044260 167 PCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-VSYNLGGMGCSAGLISI 245 (511)
Q Consensus 167 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~-~~~dl~g~gCsggl~al 245 (511)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ +++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 34667899999999999999999999999999999998765556999999999999999766 478998 7999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCCCCcCCCC--cchhhhhcccccccEEEEEeccCCcc-ccccceeeeEEeeEecCCC
Q 044260 246 DLAKDLLQVHPNSYALVISMENITLNWYFGNE--RSMLVSNCLFRMGGAAILLSNKRSDR-WRSKYRLVHTVRTHKGADD 322 (511)
Q Consensus 246 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~lv~~~lFgDGAaA~lLs~~~~~~-~~~~~~L~~~v~t~~~~d~ 322 (511)
++|++++++++.++||||++|.+|.++.++++ .+..+++++|||||+|+||++++... ..+.|++........ .+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTIL-PDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEe-cCC
Confidence 99999999999999999999999986644433 33566778999999999999865421 112345543322112 111
Q ss_pred CcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEE
Q 044260 323 KCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHF 402 (511)
Q Consensus 323 ~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~ 402 (511)
+.+..... .+.++.+.+++++|....+.+...+ +++++.. +....|+++|
T Consensus 255 ~~~~~~~i---~~~G~~~~l~~~vp~~~~~~i~~~v----------------------~~~L~~~-----gl~~~di~~~ 304 (401)
T PLN03170 255 EGAIDGHL---REVGLTFHLLKDVPGLISKNIERSL----------------------EEAFKPL-----GITDYNSIFW 304 (401)
T ss_pred cccccceE---EcCCeEEEEehHHHHHHHHHHHHHH----------------------HHHHHhc-----CCCccccCeE
Confidence 11100001 1122345667888876654332111 2233221 1124789999
Q ss_pred EecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEeeChHHHHh
Q 044260 403 CIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRIKRG---DRTWQIAFGSGFKCN 475 (511)
Q Consensus 403 ~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~----~~g~l~~G---d~VlliafGsG~~~~ 475 (511)
++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++++++||+||+|+
T Consensus 305 v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 384 (401)
T PLN03170 305 VAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384 (401)
T ss_pred EecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHH
Confidence 99999999999999999999999988999999999999999999999987 46888888 899999999999999
Q ss_pred hhheEEec
Q 044260 476 SAVWKALR 483 (511)
Q Consensus 476 s~v~r~~~ 483 (511)
++++||..
T Consensus 385 ~~ll~~~~ 392 (401)
T PLN03170 385 TVVLHSVP 392 (401)
T ss_pred hHHheecc
Confidence 99999954
No 15
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-48 Score=380.40 Aligned_cols=346 Identities=23% Similarity=0.297 Sum_probs=281.2
Q ss_pred cEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHH-HhCCCcEEeecCcccCCCCC---ccHHHHHHHHH
Q 044260 102 VYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILE-RSGLGESTYLPEAVLRVPPN---PCMAEARKEAE 177 (511)
Q Consensus 102 v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~-~sGi~~r~~~~~~~~~~~~~---~~ma~~~~ea~ 177 (511)
.+|.++++++|+ +++++.|+...+.... ..+..+-+.|.+. ..+|++|+...|.+++..+. ..+..+.|||.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~--~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELP--FQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhc--cccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 8999988877665432 2223444556666 67888888776666654331 23456899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPN 257 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~ 257 (511)
.+.++|+++||+.+++.|+|||+|++.+++...+||+.++|+++||+++++..+.+.||||+|+..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCC-cchhhhhcccccccEEEEEeccCCcc--ccccceeeeEEeeEecCCCCcccceeeccCC
Q 044260 258 SYALVISMENITLNWYFGNE-RSMLVSNCLFRMGGAAILLSNKRSDR--WRSKYRLVHTVRTHKGADDKCFSCVTQQEDP 334 (511)
Q Consensus 258 ~~aLVVs~E~~s~~~~~~~d-r~~lv~~~lFgDGAaA~lLs~~~~~~--~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~ 334 (511)
.+|||||.|.+|.++...++ ++.+++..+||||+||++++.+.... ..-++.+.+.. ++...|++ .++.+.-.
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~-StL~~dse---~~Mgwdv~ 233 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSF-STLYPDSE---DIMGWDVG 233 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccc-cccCCccc---cccceeec
Confidence 99999999999997766554 35889999999999999999865422 12234333332 22222222 23333323
Q ss_pred CCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHH
Q 044260 335 TGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDE 414 (511)
Q Consensus 335 ~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~ 414 (511)
+.+..+.+|+|+|......++.|++++ +... +...+||++|+.|+||++++++
T Consensus 234 d~G~~~vlSrdlp~lIe~~l~~~V~~f---------------------L~~~------~ls~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 234 DQGLKVVLSRDLPNLIESYLAPNVTTF---------------------LATH------GLSIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred CCcEEEEEcCchhHHHHHHhhhhHHHH---------------------HHHc------CCchhhhceeeeCCCCchHHHH
Confidence 334678899999999988888777531 1111 2336899999999999999999
Q ss_pred HHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEec
Q 044260 415 LEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
Q Consensus 415 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~ 483 (511)
+++.|||++|.++.||..|.+|||+||+++++.|.+.++++ .++|.+.++.+||+||+...++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999986 799999999999999999999999975
No 16
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.8e-47 Score=393.40 Aligned_cols=322 Identities=15% Similarity=0.224 Sum_probs=244.7
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
+++|+++|+|+|+ ++++|+|+.+..+. +++ ++.+++||++|+++++++ +..+|+
T Consensus 3 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e----~~~~la---------- 56 (326)
T PRK05963 3 SSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDE----TLSDLA---------- 56 (326)
T ss_pred ccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCC----CHHHHH----------
Confidence 6899999999999 99999999987652 444 378899999999987665 245565
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|+++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CCe
Confidence 9999999999999999999999986 57889999999999999998 689999996 9999999999999999987 489
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCcc
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g 339 (511)
||||++|..+. +.+..++.. ..+|||||+|+||+++++.. .. ++.+...++++.|+.+..+.+...
T Consensus 134 aLVv~~d~~s~-~~~~~~~~~---~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~~--- 199 (326)
T PRK05963 134 VLVVAANILSR-RINMAERAS---AVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGSA--- 199 (326)
T ss_pred EEEEEechhhc-cCCccccCc---eEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCcC---
Confidence 99999999887 445555542 57999999999999866431 12 233445667776765554432110
Q ss_pred cccchhhHHHHhhhhhhhhh-ccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHH
Q 044260 340 VSLSKDLMAVAGDALKTNIT-TLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 418 (511)
Q Consensus 340 ~~ls~d~~~~~g~~l~~ni~-~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~ 418 (511)
.+.+.+.. .+ ...+. ..|+ +.+.+..... .+.++..+++ .+...+|||+|++||+|+++++.+.+.
T Consensus 200 ~~~~~~~~---~~--~~~~~~~~~~------~~~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~~~ 266 (326)
T PRK05963 200 RPFAPERD---AS--EFLMTMQDGR------AVFTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVCET 266 (326)
T ss_pred CCCccccc---cc--ccceEecCCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHHH
Confidence 01110000 00 00000 0000 0111111111 1222222222 223358999999999999999999999
Q ss_pred cCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 419 LQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 419 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
||++++++ ..++++||||+|+|++++|+++++++++++||+|++++||+|++|+++++||
T Consensus 267 l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 267 IGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred cCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999998 5899999999999999999999999999999999999999999999999986
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.2e-46 Score=389.48 Aligned_cols=333 Identities=18% Similarity=0.188 Sum_probs=242.3
Q ss_pred CCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHH
Q 044260 98 RPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAE 177 (511)
Q Consensus 98 ~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~ 177 (511)
|.++++|+++|.|+|+ ++++++++.+.... ++++ ..+++.+++||++|+++.+++. ..+|
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~--~~~~i~~~~Gi~~R~~~~~~e~----~~~l-------- 63 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDIK--TLKRMKKVIGLNTRYICDENTC----VSDL-------- 63 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cchh--hhhhhhhccCceEEEeCCCCCC----HHHH--------
Confidence 4578999999999999 99999975443211 2222 2467889999999999876542 3455
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHP 256 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~ 256 (511)
+.+|+++||+++|++|+|||+||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 64 --a~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 64 --GKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred --HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 49999999999999999999999996 56999999999999999998889999998 599999999999999999999
Q ss_pred CCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCC
Q 044260 257 NSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTG 336 (511)
Q Consensus 257 ~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g 336 (511)
.+ ||||++|.+|. +.++.|+.. ..+|||||+|+||+++++.. . . ....+++..++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~-~~~~~d~~~---~~lFGDGAaA~vl~~~~~~~--~------~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSK-FIHPKNMNL---APIFGDGVSATLIEKTDFNE--A------F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhc-cCCcccCCc---eeeecccceEEEEEecCCCC--c------e--EEEEecCCCCCeEEecCCCcC
Confidence 88 99999999998 445566543 57999999999999755321 1 1 134567777777666543211
Q ss_pred Ccccccch-h-hHHHHhhhhh-hhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHH
Q 044260 337 RIGVSLSK-D-LMAVAGDALK-TNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLD 413 (511)
Q Consensus 337 ~~g~~ls~-d-~~~~~g~~l~-~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~ 413 (511)
..+..... + .+.. ++..+ ..+...|+ +-+.+..... .++++..+++ .+...+|||+|++||+|+++++
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~------~v~~~~~~~~-~~~i~~~L~~-~gl~~~did~~v~HQ~~~~i~~ 276 (353)
T PRK12880 206 IPKADIFNDDSLMQT-EEFRQLENLYMDGA------NIFNMALECE-PKSFKEILEF-SKVDEKDIAFHLFHQSNAYLVD 276 (353)
T ss_pred CCccccccccccccc-cccccCceEEEcCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHH
Confidence 11110000 0 0000 00000 00000011 0111111111 1122222222 2223589999999999999999
Q ss_pred HHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEec
Q 044260 414 ELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
Q Consensus 414 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~ 483 (511)
.+.+.||++++|+. ..++++||||||+|+++.|++..++|+++ +++++||+|++|+++++||.+
T Consensus 277 ~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 277 CIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred HHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 99999999999982 35689999999999999999999887764 999999999999999999943
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=3.2e-46 Score=392.07 Aligned_cols=332 Identities=17% Similarity=0.204 Sum_probs=241.2
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECV 179 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 179 (511)
.+++|+++|.|+|+ ++++|+|+.+.++. +++ +|.+++||++|+++.+++ +..+ |
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~----~~~~----------L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDE----TLTS----------L 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCC----CHHH----------H
Confidence 46899999999999 99999999987652 343 378999999999986654 2344 4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
+.+|+++||+++|++|+|||.||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|.+++++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 5999999999999999999999998754323446788999999998 79999999 599999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCcc
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g 339 (511)
||||++|.+|. +.+++|+.. ..+|||||+|+||++++... .++ ..+.+.+++..++.+..+..+....+
T Consensus 178 vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~----~~i---~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDE----DGL---LGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCC----Cce---EEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 556667654 35999999999999876431 122 23344556655544432211100000
Q ss_pred -cccchhhHHHH-hhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHH
Q 044260 340 -VSLSKDLMAVA-GDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 417 (511)
Q Consensus 340 -~~ls~d~~~~~-g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~ 417 (511)
..-..+..... ...-..++...|+. -+.+.... ..++++..+++ .+...+|||||++||+|+++++.+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~------v~~~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~ 318 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKE------VFKFAVRC-VPQVIESALQK-AGLTAESIDWLLLHQANQRIIDAVAQ 318 (379)
T ss_pred cccccccccccccccccccceEecCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00000000000 00000011111111 11111111 11222322222 22235899999999999999999999
Q ss_pred HcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 418 NLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 418 ~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
.||+++|++ ..++++||||+|+|++++|++++++|++++||+|++++||+||+|++++|+|
T Consensus 319 ~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 319 RLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 999999999 5789999999999999999999999999999999999999999999999986
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6e-45 Score=375.09 Aligned_cols=325 Identities=13% Similarity=0.184 Sum_probs=238.5
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECV 179 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 179 (511)
++++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++. ++ +..+ |
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~----~~~~----------l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GE----TSSY----------M 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CC----CHHH----------H
Confidence 46899999999999 99999999887652 343 377899999999887 43 2344 4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCC-CceEEEecCCCchHHHHHHHHHHHHHhcCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRG-NIVSYNLGGMGCSAGLISIDLAKDLLQVHPN 257 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~-~~~~~dl~g~gCsggl~al~lA~~lL~~~~~ 257 (511)
+.+|+++||+++|++|+|||+||+++ ++++..|+++..|+++||+++ ++.++|++ +||++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 59999999999999999999999986 467778999999999999985 37999999 5999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCC
Q 044260 258 SYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGR 337 (511)
Q Consensus 258 ~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~ 337 (511)
++||||++|..+. .++..++.. ..+|||||+|+||++.+.. .++. .++..++++.++....+....
T Consensus 135 ~~~Lvv~~e~~s~-~~~~~~~~~---~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~~~-- 200 (329)
T PRK07204 135 KRVLIISSEISSV-GLNWGQNES---CILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGGGT-- 200 (329)
T ss_pred CEEEEEEeccccC-CCCcccCcc---eEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecCCc--
Confidence 9999999999886 334444432 4799999999999986542 2333 333344444333221111100
Q ss_pred cccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHH
Q 044260 338 IGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 417 (511)
Q Consensus 338 ~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~ 417 (511)
..+-+.+... ....+ .+...| ++...+.....+++++..+++ .+...+|||+|++||+|+.+++.+++
T Consensus 201 -~~~~~~~~~~-~~~~~--~~~~~~-------~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~~ 268 (329)
T PRK07204 201 -MIHPREYSEE-RKEDF--LFDMNG-------RAIFKLSSKYLMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIRK 268 (329)
T ss_pred -CCCCcccccc-cccCc--eEEECC-------HHHHHHHHHHHHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 0000000000 00000 000000 010000000112333333333 23346899999999999999999999
Q ss_pred HcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 418 NLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 418 ~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
.|++++|++ ..++++||||+|+|++++|+++.++|++++||+|++++||+|++|+++++|+
T Consensus 269 ~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 269 KLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999998 6899999999999999999999999999999999999999999999999985
No 20
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=3e-45 Score=377.22 Aligned_cols=321 Identities=18% Similarity=0.264 Sum_probs=238.1
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
.|+|+++|.|+|+ ++|+|+|+.+.++. +++ +|.+++||++|++..+++. .. +|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~----------~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSSTS----LT----------KLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCCC----HH----------HHH
Confidence 4899999999999 99999999988752 333 4778999999998876542 23 455
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|+++||+++|++|+|||.||++|+ ++.. +..+..++++||++ ++.+++++ +||++++.||++|.++|+++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4433 34578899999998 68899999 599999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCC--
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGR-- 337 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~-- 337 (511)
+|||++|.+|. .++++++.. ..+|||||+|+||++.+.. .+.+ ....+|++.++.+.....+...
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~~---~~~fgDga~A~ll~~~~~~------~~~~---~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRKT---CILFGDGAGAAIIGASYEN------SILG---FKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCCc---eEEEcceeeEEEEEEcCCC------CeEE---EEEEEcCCCcceEEecCCCCCccc
Confidence 99999999987 455566542 5799999999999976542 1222 2344566555443221110000
Q ss_pred cccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHH
Q 044260 338 IGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 417 (511)
Q Consensus 338 ~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~ 417 (511)
.+... .+. + .. ..+...|+ +-+.+.... ..++++..+++ .+...+|||||++||+|+++++.+++
T Consensus 200 ~~~~~---~~~--~-~~-~~~~~~g~------~~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~~ 264 (326)
T CHL00203 200 FGTTK---LPQ--G-QY-QSISMNGK------EVYKFAVFQ-VPAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIAN 264 (326)
T ss_pred ccccc---ccc--C-Cc-ceEEECCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00000 000 0 00 00111111 001111111 12233333333 23336899999999999999999999
Q ss_pred HcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 418 NLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 418 ~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
.||+++|++ ..++++||||+|+|+++.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 265 ~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 265 RLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 999999999 5799999999999999999999999999999999999999999999999998
No 21
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-44 Score=371.93 Aligned_cols=321 Identities=19% Similarity=0.228 Sum_probs=243.3
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECV 179 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 179 (511)
.+++|.++|+|+|+ ++++++|+.+..+. +++ ++.+++||++|++..+++. ..+ |
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~----~~~----------l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY----TSD----------L 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC----HHH----------H
Confidence 46999999999999 99999999987642 333 3788999999999876652 344 4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNS 258 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~ 258 (511)
+.+|+++||+++|++++|||.||+++ ++++..|+.+.+|+++||++ ++.+++++ +||++++.||.+|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 59999999999999999999999986 46788899999999999998 58999999 69999999999999999999999
Q ss_pred eEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCc
Q 044260 259 YALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRI 338 (511)
Q Consensus 259 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~ 338 (511)
+||||++|.++. +.+..++.. .++|||||+|+||++++... + +..+...++++.++.++.+...
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~~---~~~~GDgAaA~ll~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~---- 198 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRTT---CILFGDGAGAVVLEATENEP-----G---FIDYVLGTDGDGGDILYRTGLG---- 198 (325)
T ss_pred EEEEEEehhhcC-cCCccccCc---eEEEeecceEEEEEecCCCC-----C---eEEEEEEEcCCCCCeEEEcCCC----
Confidence 999999999887 334455543 37999999999999876431 2 2334555666666555433211
Q ss_pred ccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHH
Q 044260 339 GVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 418 (511)
Q Consensus 339 g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~ 418 (511)
.....+. .. ....+...|. +.+.+.... ..+.++..+++ .+...+|||+|++||+|+++++.+.+.
T Consensus 199 -~~~~~~~-~~----~~~~~~~~~~------~~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~h~~~~~~~~~~~~~ 264 (325)
T PRK12879 199 -TTMDRDA-LS----GDGYIVQNGR------EVFKWAVRT-MPKGARQVLEK-AGLTKDDIDWVIPHQANLRIIESLCEK 264 (325)
T ss_pred -CCCCccc-cc----cCccEEEcCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 1110000 00 0000000000 000111110 01222222222 222358999999999999999999999
Q ss_pred cCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 419 LQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 419 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
||++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++++++++||
T Consensus 265 lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 265 LGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred cCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 99999998 4689999999999999999999999999999999999999999999999998
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.3e-44 Score=373.74 Aligned_cols=320 Identities=19% Similarity=0.208 Sum_probs=239.8
Q ss_pred CCCcEEEEEeEEcCCCCceecHHHHHHHhcccC---CCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHH
Q 044260 99 PQPVYLVNFACYKPEDARKCTRQIFMERSGLTG---TFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKE 175 (511)
Q Consensus 99 ~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~---~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~e 175 (511)
.++++|.+++.|+|+ ++++++++.+.+.... ..++ +++.+++||++|++.++++ +..
T Consensus 3 ~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~----~~~-------- 62 (338)
T PRK09258 3 YSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT----QLS-------- 62 (338)
T ss_pred ccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC----CHH--------
Confidence 467999999999999 9999999998754211 1122 2467789999999976543 233
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
+|+.+|+++||+++|++++|||.||++| ++++..|+++.+|+++||+++++.+||+++ ||+|++.||++|.+++++
T Consensus 63 --~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~ 139 (338)
T PRK09258 63 --DGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIEL 139 (338)
T ss_pred --HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHc
Confidence 4559999999999999999999999986 468889999999999999987799999995 999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCcCCC------Cc------chhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCC
Q 044260 255 HPNSYALVISMENITLNWYFGN------ER------SMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADD 322 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~~~~~~~------dr------~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~ 322 (511)
++.++||||++|..+. ++++. +. ...+...+|||||+|+||++++... ..+++... ...+++
T Consensus 140 g~~~~~Lvv~~e~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~~---~~~~~~ 213 (338)
T PRK09258 140 GQIDYALVVSGESARE-IVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLGG---VTRAAT 213 (338)
T ss_pred CCCCEEEEEEecccch-hccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeeee---eeecCC
Confidence 9999999999999876 32211 11 1123357899999999999865421 12344332 223344
Q ss_pred CcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEE
Q 044260 323 KCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHF 402 (511)
Q Consensus 323 ~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~ 402 (511)
+.++.+ .+. ...+..+.+.+.... ... ..++++..+++ .+...+|||+|
T Consensus 214 ~~~~~~-~~~------~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~L~~-~g~~~~did~~ 262 (338)
T PRK09258 214 EHHELC-QGG------RDGMRTDAVGLLKEG----------------------VEL-AVDTWEAFLAQ-LGWAVEQVDRV 262 (338)
T ss_pred Cccccc-ccC------ccceEEcHHHHHHHH----------------------HHH-HHHHHHHHHHH-cCCCHHHCCEE
Confidence 433311 110 011222222221111 110 11222222222 12235799999
Q ss_pred EecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 403 CIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 403 ~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
++||+|+++++.+++.||++++|+ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 263 i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 263 ICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 999999999999999999999999 5788999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=8.5e-44 Score=368.12 Aligned_cols=328 Identities=17% Similarity=0.176 Sum_probs=241.8
Q ss_pred CCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHH
Q 044260 99 PQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAEC 178 (511)
Q Consensus 99 ~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~ 178 (511)
|++|+|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. ..+|+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~----~~~la-------- 57 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH----TSDMA-------- 57 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC----HHHHH--------
Confidence 568999999999999 89999999887652 443 3678899999999876542 34554
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeec--CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc-C
Q 044260 179 VMFGALDELFAKTSLKPKDIGILIVNCS--LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV-H 255 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p~dID~LIv~~s--~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~-~ 255 (511)
.+|+++||+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||.+|.+++++ +
T Consensus 58 --~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 58 --IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997743 4778999999999999997 78999999 5999999999999999999 6
Q ss_pred CCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCC
Q 044260 256 PNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPT 335 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~ 335 (511)
..+++|||++|..+. ..+..++.... ...|||||+|+||++.+.. +++ +.+...+|++.++.+..+.++
T Consensus 134 ~~~~~Lvv~~~~~s~-~~~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g- 202 (339)
T PRK06840 134 SIENVLLVGGYRNSD-LVDYDNPRTRF-MFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGG- 202 (339)
T ss_pred CccEEEEEeeccccc-ccCcCCCCeee-eccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCC-
Confidence 688999999999877 33333333210 1248999999999976542 333 344556677666655444321
Q ss_pred CCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHH----HHHHHHHHhhcccccccccccccEEEecCCchHH
Q 044260 336 GRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFAT----LVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAV 411 (511)
Q Consensus 336 g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~----~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~v 411 (511)
...+.+.+.... +.. .+...+|. .+...+. ....++++..+++ .....+|||+|++||+|+++
T Consensus 203 --~~~~~~~~~~~~-~~~---~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~h~~~~~~ 269 (339)
T PRK06840 203 --TKQPASPETVEN-RQH---YLDVIDPE------SMKERLDEVSIPNFLKVIREALRK-SGYTPKDIDYLAILHMKRSA 269 (339)
T ss_pred --cCCCCccccccc-ccc---eEEEcCcH------HHHHHhHhhHHHHHHHHHHHHHHH-cCCCHHHCCEEEECCcCHHH
Confidence 111111110000 000 00000110 0000000 0012233333322 22335899999999999999
Q ss_pred HHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEe
Q 044260 412 LDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKAL 482 (511)
Q Consensus 412 l~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~ 482 (511)
++.+++.||++++++ .++.+||||+|+|++++|.+++++|++++||++++++||+|++|+++++||.
T Consensus 270 ~~~~~~~Lgl~~~~~----~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 270 HIALLEGLGLTEEQA----IYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHcCCCHHHe----EeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 999999999999997 2689999999999999999999999999999999999999999999999994
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.8e-43 Score=361.61 Aligned_cols=319 Identities=20% Similarity=0.294 Sum_probs=241.6
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
+++|.++++|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. ..+| +
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~~----~~~l----------a 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGET----TSDL----------A 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCCC----HHHH----------H
Confidence 5899999999999 89999999998742 333 4788999999999876542 3444 5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 5667899999999999998 79999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCcc
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g 339 (511)
||||++|.++. ..+..++. ..++|||||+|+||++.+.. .++. .+...++++.++.+..+..+..
T Consensus 133 vLvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~---~~~~~~~~~~~~~~~~~~~~~~--- 197 (320)
T cd00830 133 VLVVGAETLSR-ILDWTDRS---TAVLFGDGAGAVVLEATEED-----PGIL---DSVLGSDGSGADLLTIPAGGSR--- 197 (320)
T ss_pred EEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEecCCC-----CcEE---EEEEEEcCCCCCeEEeCCCCcC---
Confidence 99999999887 33334443 25799999999999987642 2343 3445566666666554432111
Q ss_pred cccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHHc
Q 044260 340 VSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 419 (511)
Q Consensus 340 ~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~L 419 (511)
.+. +.... -...+...++.+ ....... .+++++..+++ .+...+|||+|++||+|+++++.+++.|
T Consensus 198 ~~~--~~~~~----~~~~~~~~~~~~------~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 263 (320)
T cd00830 198 SPF--EDAEG----GDPYLVMDGREV------FKFAVRL-MPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKRL 263 (320)
T ss_pred Ccc--ccccc----cCccEEEcChHH------HHHHHHh-hHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 000 00000 000000011100 0000100 12233333322 2233589999999999999999999999
Q ss_pred CCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhhe
Q 044260 420 QLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVW 479 (511)
Q Consensus 420 gl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 479 (511)
|++++++ ..++++|||++|+|++++|+++.++|++++||+|++++||+|++|+++++
T Consensus 264 gl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 264 GLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999998 57999999999999999999999999999999999999999999999875
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=4.6e-43 Score=359.15 Aligned_cols=313 Identities=22% Similarity=0.276 Sum_probs=242.4
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
.++|.++++|+|+ ++++++++.+..+. +++ +|.+++|+++|++..+++. ..+| +
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~~l----------a 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDET----SSTM----------G 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCCC----HHHH----------H
Confidence 4899999999999 89999999987652 232 3778899999998866652 3444 5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|++++|+++|++|+|||.+|+++ ++++..|+.+.++++++|++ ++.+++++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999986 46777899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCC---
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTG--- 336 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g--- 336 (511)
+|||++|..+. +.++.++.. ..+|||||+|+||++.+... + +..+...++++.++.++.+.+...
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~~---~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRGT---CVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTSG 201 (318)
T ss_pred EEEEEehhhcC-cCCcCCCCe---EEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCCC
Confidence 99999999876 444455543 36899999999999876532 2 334455667776666555443211
Q ss_pred CcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHH
Q 044260 337 RIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELE 416 (511)
Q Consensus 337 ~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~ 416 (511)
..++ +...|+. .+...... ..++++..+++ ...-.+||+||++||+++++++.++
T Consensus 202 ~~~~-----------------~~~~~~~------~~~~~~~~-~~~~~~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~ 256 (318)
T TIGR00747 202 PSPF-----------------ITMEGNE------VFKHAVRK-MGDVVEETLEA-NGLDPEDIDWFVPHQANLRIIEALA 256 (318)
T ss_pred CCCc-----------------eEECCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHH
Confidence 0000 0000100 00001110 01122222222 1222579999999999999999999
Q ss_pred HHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 417 KNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 417 ~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
+.||++++|+. .++++||||+|+|+++.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 257 ~~lgi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 257 KRLELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHcCCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999994 789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-41 Score=348.64 Aligned_cols=316 Identities=22% Similarity=0.283 Sum_probs=240.8
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECV 179 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l 179 (511)
..|+|.++++|+|+ ++++++++.+..+. +++ +|.+++|+++|+++.+++. .. +|
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~----~~----------~l 55 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDET----TS----------DL 55 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCCC----HH----------HH
Confidence 36899999999999 99999999997652 332 4778999999988765542 23 45
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNS 258 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~ 258 (511)
+.+|++++|+++|++++|||.+|++++ ++...|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.+++++|+.+
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~ 133 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYK 133 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCC
Confidence 599999999999999999999999864 5666899999999999996 78999999 59999999999999999999999
Q ss_pred eEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCc
Q 044260 259 YALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRI 338 (511)
Q Consensus 259 ~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~ 338 (511)
+|||+++|.++. +++..++.. ..+|||||+|+||++++.. ++ ..++..++++.++.+..+.++...
T Consensus 134 ~vLvv~~e~~s~-~~~~~~~~~---~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~- 199 (319)
T PRK09352 134 NVLVIGAEKLSR-IVDWTDRST---CVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRG- 199 (319)
T ss_pred EEEEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCC-
Confidence 999999999887 444445443 3699999999999987642 22 233445566655544443321110
Q ss_pred ccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHH
Q 044260 339 GVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 418 (511)
Q Consensus 339 g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~ 418 (511)
+.+.. .+...|. +.+...... ..++++..+++ .....+||+||++|++|+.+++.+++.
T Consensus 200 --~~~~~-----------~~~~~~~------~~~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~ 258 (319)
T PRK09352 200 --PASPG-----------YLRMEGR------EVFKFAVRE-LAKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAKK 258 (319)
T ss_pred --CCCCC-----------ceEECCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 00000 0000000 000011111 12233333322 122357999999999999999999999
Q ss_pred cCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEE
Q 044260 419 LQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 419 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
||++++++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 259 lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 259 LGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred hCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 99999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.4e-41 Score=353.93 Aligned_cols=346 Identities=17% Similarity=0.177 Sum_probs=236.4
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
+|+|.++|+|+|+ ++|+|+++.+.++......+ ...++|++++||++|+++.++.- .+.. ...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~--~~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEG--RPTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCC--CCCC-------CHHHHH
Confidence 5899999999999 89999999987764211111 12257999999999998754321 0111 134677
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999987 46788899999999999998 58899998 699999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCC------------cc--h----hhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCC
Q 044260 260 ALVISMENITLNWYFGNE------------RS--M----LVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGAD 321 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~d------------r~--~----lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d 321 (511)
||||++|.+|..+ ++++ +. . -..+++|||||+|+||++.+... ...+ ++...+..++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998733 2211 10 0 01135799999999999866421 1111 1211222333
Q ss_pred CCcccceeeccCC---CC-Ccccc-cchhhHHHHhh-hhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccc
Q 044260 322 DKCFSCVTQQEDP---TG-RIGVS-LSKDLMAVAGD-ALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDF 395 (511)
Q Consensus 322 ~~~~~~v~~~~d~---~g-~~g~~-ls~d~~~~~g~-~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~ 395 (511)
...++.++..... ++ ..++. ...+-+...+. .++.+... + .+ ++.. ...+.++..+++ .+..
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~---~~~~-~~~~~i~~~L~~-~gl~ 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRL----L---NE---NIVV-YTIKPLLELVDK-RNLD 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHH----H---HH---HhHH-HHHHHHHHHHHH-cCCC
Confidence 2223222221100 00 00000 01110000000 00000000 0 00 0000 001122222222 1223
Q ss_pred cccccEEEecCCchHHHHHHHHHc-----CCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeCh
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNL-----QLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGS 470 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~L-----gl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGs 470 (511)
.+|||+|++||+|.++++.+.+.| |++++|+ ..++++||||+|||+|++|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 589999999999999999999987 8999998 68999999999999999999999999999999999998876
Q ss_pred H-HHHhhhheEEe
Q 044260 471 G-FKCNSAVWKAL 482 (511)
Q Consensus 471 G-~~~~s~v~r~~ 482 (511)
| +.++.+++.|.
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 6 99999999874
No 28
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=7.7e-42 Score=354.94 Aligned_cols=311 Identities=19% Similarity=0.203 Sum_probs=231.3
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
.++|.++|.|+|+ ++++|+++.+..+. +++ +|.+++||++|+++++++. ..+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~~----~~~la---------- 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDED----TATIA---------- 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCcC----HHHHH----------
Confidence 5899999999999 99999999988752 554 3888999999999876652 34555
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|+++||+++|++|+|||.||++| ++++..|+.+.+|+++||+++++.++|++ +||++++.||.+|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 46778899999999999998678899998 599999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCcc
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g 339 (511)
||||++|.... +..++.. ..|||||+|+||++.+. ..++.+... ...|. .+.+..+.......+
T Consensus 135 aLVv~~e~~~~---~~~~~~~----~~~GDGA~A~ll~~~~~-----~~~i~~~~~--~~~d~--~d~~~~~~~~~~~~~ 198 (347)
T PRK04262 135 ALAIGADTAQG---APGDALE----YTAAAGGAAFIIGKEEV-----IAEIEATYS--YTTDT--PDFWRREGEPYPRHG 198 (347)
T ss_pred EEEEEEeeecc---CCCCCCC----CcCCCCcEEEEEecCcc-----cceeecccc--ccccc--hhhcCCCCCcCCCcC
Confidence 99999998322 2234332 46899999999997432 133332211 11222 111111000000000
Q ss_pred cccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHHc
Q 044260 340 VSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 419 (511)
Q Consensus 340 ~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~L 419 (511)
..++++ + .++.. ..++++..+++ .....+|||+|++||+|+++++.+++.|
T Consensus 199 ~~~~~~-~--------------------------~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~~L 249 (347)
T PRK04262 199 GRFTGE-P--------------------------AYFKH-IISAAKGLMEK-LGLKPSDYDYAVFHQPNGKFPLRVAKML 249 (347)
T ss_pred ceecch-H--------------------------HHHHH-HHHHHHHHHHH-hCcCHHHhceeecCCCchHHHHHHHHHc
Confidence 011110 0 00000 11222222222 1223589999999999999999999999
Q ss_pred CCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEecccC
Q 044260 420 QLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIN 486 (511)
Q Consensus 420 gl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 486 (511)
|++++++..+. ++++||||||+|+|++|+++++ ++++||+|++++||+|+++.+.+||+.+...
T Consensus 250 gl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 250 GFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred CCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 99999996433 6899999999999999999986 4899999999999999999999999976554
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=4.1e-41 Score=349.21 Aligned_cols=315 Identities=17% Similarity=0.194 Sum_probs=232.0
Q ss_pred cEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHHH
Q 044260 102 VYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVMF 181 (511)
Q Consensus 102 v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~ 181 (511)
++|.++|+|+|+ ++++|+++.+..+. ++++ |.+++||++|+++++++. ..+|+ .
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~~------i~~~~Gi~~r~v~~~~~~----~~~la----------~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPES------ISNGLPVEEKAVPGLDED----TATIG----------V 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHhH------eeeccceeeeecCCCCCC----HHHHH----------H
Confidence 689999999999 99999999887652 4554 778999999999877652 45555 9
Q ss_pred HHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeE
Q 044260 182 GALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYA 260 (511)
Q Consensus 182 ~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~a 260 (511)
+|+++||+++|++|+|||.||++| ++++..|+.+..|++++|+++++.++|+++ ||+|++.||.+|.+++++|..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999986 467778999999999999986789999995 999999999999999999999999
Q ss_pred EEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCC-CcccceeeccCCCCCcc
Q 044260 261 LVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADD-KCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 261 LVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~-~~~~~v~~~~d~~g~~g 339 (511)
|||++|..+. +..|+. ...|||||+|+||++.+.. .++.+.. ...+|+ +.++.........+ +
T Consensus 135 LVv~~d~~~~---~~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~~~~~~~~~~~--~ 198 (345)
T TIGR00748 135 LAIGADTAQG---APGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWRREGEPYPRHG--G 198 (345)
T ss_pred EEEEEeeccc---CCCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceecccccccccCCCcCCCcC--C
Confidence 9999999764 223433 2578999999999965421 1222211 111222 11111000000000 0
Q ss_pred cccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHHc
Q 044260 340 VSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 419 (511)
Q Consensus 340 ~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~L 419 (511)
... +. .+-+.++... .+++++. .....+|||+|++||+|.++++.+.+.|
T Consensus 199 -~~~-------~~----------------~~~~~~~~~~-~~~~L~~-----~gl~~~did~~i~Hq~~~~~~~~~~~~l 248 (345)
T TIGR00748 199 -RFT-------GE----------------PAYFHHVVTA-AKGLMEK-----LGLTPEDFDYAVFHQPNGKFYLVAARML 248 (345)
T ss_pred -eec-------Ch----------------HHHHHHHHHH-HHHHHHH-----cCCCHHHcCEEEeCCCChHHHHHHHHHc
Confidence 000 00 0001111111 1233322 1223579999999999999999999999
Q ss_pred CCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEecccCCCCCCCCcc
Q 044260 420 QLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTINPAKEKNPWM 495 (511)
Q Consensus 420 gl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~~~~~~~~w~ 495 (511)
|++++++..+ ...++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|.+..... .+|+
T Consensus 249 gl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~---~~~~ 318 (345)
T TIGR00748 249 GFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEK---RDLA 318 (345)
T ss_pred CCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHH---hhhh
Confidence 9999998421 13489999999999999999986 689999999999999999999999998665533 3675
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.2e-40 Score=343.17 Aligned_cols=347 Identities=14% Similarity=0.173 Sum_probs=234.0
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccC-CCChhh---H----------HHHHHHHHHhCCCcEEeecCcc----c
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTG-TFSQEN---L----------DFQRKILERSGLGESTYLPEAV----L 161 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~-~~~~~~---~----------~f~~ri~~~sGi~~r~~~~~~~----~ 161 (511)
++|+|+++|+|+|+ ++++|+|+.+.++... .|.++. + ...++|.+++||++|++..+.. .
T Consensus 1 ~~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 36899999999999 8999999988753210 111000 0 0124588899999999985321 0
Q ss_pred CCCCC--ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCc
Q 044260 162 RVPPN--PCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGC 238 (511)
Q Consensus 162 ~~~~~--~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gC 238 (511)
..++. .........+.+|+.+|+++||+++|++++|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VAC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chh
Confidence 00000 0011111245689999999999999999999999999875 5778999999999999996 5789998 699
Q ss_pred hHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEe
Q 044260 239 SAGLISIDLAKDLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHK 318 (511)
Q Consensus 239 sggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~ 318 (511)
++++.||.+|.++|+++..++||||++|.++. +.+..|++. +.+|||||+|+||++.+....+.++++++.. .
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d~~~---~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRDRDS---HFIFGDVATAVIVERADTATSAGGFEILGTR---L 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccCCCC---CEEecCccEEEEEeeccccccCCCceEEEEE---e
Confidence 99999999999999999999999999999887 334456642 4799999999999986543222345554432 1
Q ss_pred cCCCCcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhccccccccccc
Q 044260 319 GADDKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLA 398 (511)
Q Consensus 319 ~~d~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~d 398 (511)
.++ ..+.+..+. | .+.....+-+.... .++..-|+. .+.++... ..+.++..+++ .+...+|
T Consensus 229 ~~~--~~~~~~~~~---G-~~~~~~~~~~~~~~----~~~~~~g~~------~~~~~~~~-~~~~i~~~L~~-~gl~~~d 290 (372)
T PRK07515 229 FTQ--FSNNIRNNF---G-FLNRADPEGIGARD----KLFVQEGRK------VFKEVCPM-VAEHIVEHLAE-NGLTPAD 290 (372)
T ss_pred ecc--cccceecCC---C-CCCCCCcccccccc----ceEEeccHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHH
Confidence 121 111111110 0 00000000000000 000000110 01111111 11233333332 2223589
Q ss_pred ccEEEecCCchHHHHHHHHH-cCCC--cccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHh
Q 044260 399 FEHFCIHAGGRAVLDELEKN-LQLS--DRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 475 (511)
Q Consensus 399 id~~~~H~~g~~vl~~i~~~-Lgl~--~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 475 (511)
||+|++||+|+++++.+.+. ||++ +++. +.++++||||+|+|++++|+++. +++++||+|++++||+|++|+
T Consensus 291 Id~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~ 365 (372)
T PRK07515 291 VKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIG 365 (372)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHH
Confidence 99999999999999999988 5654 4444 67999999999999999999874 578999999999999999999
Q ss_pred hhheEE
Q 044260 476 SAVWKA 481 (511)
Q Consensus 476 s~v~r~ 481 (511)
++++|.
T Consensus 366 ~~ll~~ 371 (372)
T PRK07515 366 SVIVRK 371 (372)
T ss_pred HHHhcc
Confidence 999974
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=5.8e-39 Score=328.90 Aligned_cols=321 Identities=21% Similarity=0.268 Sum_probs=232.9
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
.|+|.++++|+|+ ++++++++.+..+. + ++..++||++|++..+++ +..+ |+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~----~~~~----------l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE----DVPT----------MA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCC----CHHH----------HH
Confidence 4789999999999 99999999987652 1 266789999999986533 2344 45
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|++++|+++|++++|||.||++++ ++...|+.+.+|++++|++ ++.+++++ +||++++.||.+|.++++++..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 5566889999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCcc
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g 339 (511)
+|||++|.++.... ..++ ..++|||||+|+||++.+.. ..+++. .++..+++..+++.....+ +...
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~---~~~~~~~~~~~~~~~~~~~--~~~~ 197 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIV---STHSTSDPGYDFSPYPVMD--GGYP 197 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCce---eeeeecccccccCccceec--cCCC
Confidence 99999999887332 1222 24799999999999987642 123343 3444455543320000000 0000
Q ss_pred cccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCch-HHHHHHHHH
Q 044260 340 VSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGR-AVLDELEKN 418 (511)
Q Consensus 340 ~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~-~vl~~i~~~ 418 (511)
.... ......+..+... . +-....... ..++++..+++ .... +||++|++||+|+ .+++.+++.
T Consensus 198 ~~~~----~~~~~~~~~~~~~--~------~~~~~~~~~-~~~~~~~~l~~-~~~~-~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 198 KPCK----LAYAIRLTAEPAG--R------AVFEAAHKL-IAKVVRKALDR-AGLS-EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred cchh----hhhhcceeecCCc--c------chHHHHhHH-HHHHHHHHHHH-cccc-cccceeeccCchHHHHHHHHHHH
Confidence 0000 0000000000000 0 000011111 12233333332 1112 6899999999999 999999999
Q ss_pred cCCCcccccchhh-ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhhe
Q 044260 419 LQLSDRHMEPSRM-TLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVW 479 (511)
Q Consensus 419 Lgl~~e~~~~S~~-~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~ 479 (511)
|+++++++.+++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++++++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976654 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=4.7e-35 Score=307.40 Aligned_cols=306 Identities=17% Similarity=0.160 Sum_probs=218.4
Q ss_pred cEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHHH
Q 044260 102 VYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVMF 181 (511)
Q Consensus 102 v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~ 181 (511)
|+|.+++.|+|+ ++++++++.+..+. +++ ++....|++++++.++++. ..+|+ .
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~ed----~~~la----------~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDED----IVTMA----------A 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCCC----HHHHH----------H
Confidence 589999999999 99999999987652 554 4777899999988776652 34555 9
Q ss_pred HHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeE
Q 044260 182 GALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYA 260 (511)
Q Consensus 182 ~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~a 260 (511)
+|+++||+++ +|++||.||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||.+|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999996 56777899999999999998889999999 5999999999999999999999999
Q ss_pred EEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEE-eeEecCCCCcccceeeccCCCCCcc
Q 044260 261 LVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTV-RTHKGADDKCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 261 LVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v-~t~~~~d~~~~~~v~~~~d~~g~~g 339 (511)
|||++|+... ...+.. ..+|||||+|+||++.+. +..+. .+...+++. ++. +.+...
T Consensus 132 LVv~~D~a~~---~~~~~~----~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~df-~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY---GLESPG----EPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MDF-WRPNYS----- 189 (379)
T ss_pred EEEEeehhhc---ccCCCC----CccccCccEEEEEecCCC--------eeEEeccceeeecCC-CCc-cCCCCC-----
Confidence 9999998432 111111 258999999999987542 11111 111112221 111 112110
Q ss_pred cccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHH----HHHH
Q 044260 340 VSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAV----LDEL 415 (511)
Q Consensus 340 ~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~v----l~~i 415 (511)
+.+.+.++. ....++... .++++..+++ .+...+|||+||+||++.++ ++.+
T Consensus 190 -----~~~~v~g~~-----------------s~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDGQY-----------------SNEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECcHH-----------------HHHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 001111110 011122111 2233322222 23336899999999997776 3445
Q ss_pred HHHcCCCc-c----cccchhhccccccccccchHHHHHHHHHHcC-CCCCCCEEEEEeeChHHHHhhhheEEe
Q 044260 416 EKNLQLSD-R----HMEPSRMTLYRFGNTSSSSLWYELAYSEAKG-RIKRGDRTWQIAFGSGFKCNSAVWKAL 482 (511)
Q Consensus 416 ~~~Lgl~~-e----~~~~S~~~l~r~GNtsSasi~~~La~~~~~g-~l~~Gd~VlliafGsG~~~~s~v~r~~ 482 (511)
.+.++++. + .+++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|+|++||+|+.......+..
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~ 318 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLV 318 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEc
Confidence 66677773 2 3345667899999999999999999999885 799999999999999977655555543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=3.7e-33 Score=296.58 Aligned_cols=311 Identities=16% Similarity=0.245 Sum_probs=218.0
Q ss_pred CCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEee--cCcccCCCCCccHHHHHHH
Q 044260 98 RPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYL--PEAVLRVPPNPCMAEARKE 175 (511)
Q Consensus 98 ~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~--~~~~~~~~~~~~ma~~~~e 175 (511)
+|++|+|.++|.|+|+ ++|+++++.+..+. +++| + ++||++|+++ +++| ...+|+
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~~------~--~~GI~~r~~ava~~~E----d~~tmA----- 57 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKGK------Y--TIGLGQDCMAFCTDVE----DVISMS----- 57 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHHH------H--hhccceeEeccCCCCC----CHHHHH-----
Confidence 4788999999999999 99999999988763 6665 3 5899999974 3444 245665
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHH---HHcCCCCCceEEEecCCCchHHHHHHHHHHHH
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVI---NHYKLRGNIVSYNLGGMGCSAGLISIDLAKDL 251 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~---~~LGl~~~~~~~dl~g~gCsggl~al~lA~~l 251 (511)
++|+++||+++|++|++||.||++| +++...|++|+.|+ ++||.+ ++.+||++ .+|+||+.||++|.++
T Consensus 58 -----~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 58 -----LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred -----HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 9999999999999999999999997 57788999999886 688876 89999999 5999999999999999
Q ss_pred HhcCC--CCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCC-cccce
Q 044260 252 LQVHP--NSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDK-CFSCV 328 (511)
Q Consensus 252 L~~~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~-~~~~v 328 (511)
++++. .++||||++|+.+... . ..+ ..+||||+|+||+..+. ..+... ..++... .|+ .
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~-~-~~e------~t~GdGA~A~lv~~~~~------~~l~~~---~~g~~~~~~~D-f 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAE-G-PAR------PTGGAGAVAMLVGPNAP------IVFESK---YRGSHMAHVYD-F 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccC-C-CCC------CCCCcceEEEEEccCCC------ceeecc---cccccCcccch-h
Confidence 99986 5999999999965421 1 122 36699999999986442 111111 1111111 122 1
Q ss_pred eeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccc-----cccccccccEEE
Q 044260 329 TQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPY-----IPDFKLAFEHFC 403 (511)
Q Consensus 329 ~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~-----~~~~~~did~~~ 403 (511)
+.|.... +.|.+.|+ +.+.+++..+ .+.++...++. .+...+|||+||
T Consensus 193 ~rP~~~~---------~~~~vdG~-----------------~s~~~yl~~~-~~~~~~~~~k~~~~~~~g~~~~d~d~~v 245 (459)
T PLN02577 193 YKPDLAS---------EYPVVDGK-----------------LSQTCYLMAL-DSCYKRFCEKYEKLEGKQFSISDADYFV 245 (459)
T ss_pred cccCCCC---------CceEEcch-----------------HHHHHHHHHH-HHHHHHHHHHhhcccccCCCHHHcCEEE
Confidence 2222100 01111111 1111222221 11222111110 022468999999
Q ss_pred ecCCchHHHHHHHHHcCCC----------------------------------------------cccccchhhcccccc
Q 044260 404 IHAGGRAVLDELEKNLQLS----------------------------------------------DRHMEPSRMTLYRFG 437 (511)
Q Consensus 404 ~H~~g~~vl~~i~~~Lgl~----------------------------------------------~e~~~~S~~~l~r~G 437 (511)
+||+..++-.+..+.|.+. .+|++||...-++.|
T Consensus 246 fHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 325 (459)
T PLN02577 246 FHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVG 325 (459)
T ss_pred ecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcC
Confidence 9999887777765555311 167777877888999
Q ss_pred ccccchHHHHHHHHHHcCC-CCCCCEEEEEeeChHHHHhhhheEEec
Q 044260 438 NTSSSSLWYELAYSEAKGR-IKRGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
Q Consensus 438 NtsSasi~~~La~~~~~g~-l~~Gd~VlliafGsG~~~~s~v~r~~~ 483 (511)
|+.++|++..|.-+++... ..+|+||.++++|||......-.+...
T Consensus 326 N~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 326 NMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred cccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 9999999999999987542 459999999999999776666665543
No 34
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.98 E-value=6.3e-32 Score=261.59 Aligned_cols=203 Identities=24% Similarity=0.302 Sum_probs=162.0
Q ss_pred HhCCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCCh--hhHHHHHHHHHHhCCCcEEeecCccc-C------CCC-
Q 044260 96 LTRPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQ--ENLDFQRKILERSGLGESTYLPEAVL-R------VPP- 165 (511)
Q Consensus 96 ~~~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~--~~~~f~~ri~~~sGi~~r~~~~~~~~-~------~~~- 165 (511)
.+.+.+.+|+++|+..|+ ++++++++.+.+.+.-..++ +..+++++|++++||++|+..-+.++ . ...
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456778999999999999 99999999886422111122 44567899999999999987643221 0 011
Q ss_pred ---CccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHH
Q 044260 166 ---NPCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGL 242 (511)
Q Consensus 166 ---~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl 242 (511)
...|+.+.+++.+|+.+|++++|+++|++++|||+||++|++....|++..+|+++|||++++..+.|++|||.||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 12467789999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeccCCCCCcCC--CCcchhhhhcccccccEEEEEeccC
Q 044260 243 ISIDLAKDLLQVHPNSYALVISMENITLNWYFG--NERSMLVSNCLFRMGGAAILLSNKR 300 (511)
Q Consensus 243 ~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~--~dr~~lv~~~lFgDGAaA~lLs~~~ 300 (511)
.||..|+++.+++|..+||||+.|.+|.+|... .+++.+++++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999877643 3467899999999999999998754
No 35
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.97 E-value=3e-30 Score=263.52 Aligned_cols=313 Identities=19% Similarity=0.224 Sum_probs=232.8
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVM 180 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~ 180 (511)
.++|.+++.|.|. ++|+.+|+.+..+. +++ ++..-+|++++.+.+.+| ...+|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E----D~vTma---------- 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE----DAVTMA---------- 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch----hHHHHH----------
Confidence 5899999999999 99999999987652 443 578889999999988776 345666
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
++||+++|++.+++|++|+.|+++| |..+..-+.|..|++.||+.+++.++|+.+ +|-++..||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999998 566778889999999999999999999995 99999999999999999999999
Q ss_pred EEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeeccCCCCCcc
Q 044260 260 ALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIG 339 (511)
Q Consensus 260 aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g 339 (511)
+|||++|+ ++ |...+..+ ...|+||+|+|++..+... ..+.... +++..-.+.|+ +++.
T Consensus 135 ~LvI~sD~-a~--~~~~~~~E----~t~GAGavA~lIg~n~~~~----a~~~~~~-syt~d~~DFwR----p~~~----- 193 (377)
T COG3425 135 GLVIGADT-AQ--YAPGDALE----YTAGAGAVAFLIGKNPPIV----AEFEGTG-SYTTDTPDFWR----PDGQ----- 193 (377)
T ss_pred eEEEeehh-hc--cCCCcccC----ccCCCceEEEEEccCCCeE----EEecCce-EEecCCCcccc----cCCC-----
Confidence 99999998 33 22233333 5889999999999853321 1111111 11111122332 2221
Q ss_pred cccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHHc
Q 044260 340 VSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 419 (511)
Q Consensus 340 ~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~L 419 (511)
..|.+.|+ +|+. .|++.+ .+.++.-.++ .+...+|||++|+|+++.++-....+.+
T Consensus 194 -----~yp~~dg~---------------~s~~--~Y~~~~-~~a~~~~~~k-~gls~~dfdy~vfH~P~~k~~~ka~k~l 249 (377)
T COG3425 194 -----PYPYVDGR---------------FSEP--AYFKHV-ENAAKGYMEK-TGLSPDDFDYIVFHQPNGKFPKKAAKSL 249 (377)
T ss_pred -----cccccCce---------------ecHH--HHHHHH-HHHHHHHHHH-hCCChhhhCeEEecCCCCchHHHHHHHh
Confidence 01222111 0100 111111 1111111111 1222589999999999999999999999
Q ss_pred CCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhhheEEecccC
Q 044260 420 QLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIN 486 (511)
Q Consensus 420 gl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 486 (511)
+.+.+++.|+....++.||+.|+|+++.|+.+++..+ .+||||++.+||+|......-.+....+.
T Consensus 250 ~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 250 GFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred CccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 9999999999888899999999999999999998766 79999999999999655544444444443
No 36
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=2.7e-30 Score=274.48 Aligned_cols=315 Identities=15% Similarity=0.232 Sum_probs=211.3
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEe--ecCcccCCCCCccHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTY--LPEAVLRVPPNPCMAEARKEAEC 178 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~--~~~~~~~~~~~~~ma~~~~ea~~ 178 (511)
+|+|.+++.|+|+ ++|+++++.+..+. ++++ + .+||++|+. +++++ ...+|+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~k------~--~~GI~~rr~av~~~~E----d~~tma-------- 54 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAGK------Y--TIGLGQTKMGFCTDRE----DINSLC-------- 54 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHHH------h--eechhheecccCCCCC----CHHHHH--------
Confidence 5899999999999 99999999887653 4443 3 599999984 55544 245555
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHc---CCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 179 VMFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHY---KLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~L---Gl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|++++|++++++|++||.||++| ++++..|+.+..|++.| |.+ ++.+||+. .+|+|++.||.+|.+++++
T Consensus 55 --~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 55 --LTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIES 130 (454)
T ss_pred --HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHc
Confidence 9999999999999999999999997 67889999999999955 455 89999999 5999999999999999998
Q ss_pred CC--CCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeEecCCCCcccceeecc
Q 044260 255 HP--NSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTHKGADDKCFSCVTQQE 332 (511)
Q Consensus 255 ~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~~~~d~~~~~~v~~~~ 332 (511)
+. .++||||++|+. . |. +.+. ..++||||+|+||+..+.- -++. ++..+++....+.|+ |.
T Consensus 131 ~~~~~~~aLVV~sDia-~--y~--~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIA-V--YA--KGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----PD 193 (454)
T ss_pred CCcCCCeEEEEEeccc-c--cc--CCCe---eeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----CC
Confidence 85 699999999992 2 22 2221 2478999999999876541 0111 011122222223332 21
Q ss_pred CCCCCcccccchhhHHHHhhh-hhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccc---cccccccccEEEecCCc
Q 044260 333 DPTGRIGVSLSKDLMAVAGDA-LKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPY---IPDFKLAFEHFCIHAGG 408 (511)
Q Consensus 333 d~~g~~g~~ls~d~~~~~g~~-l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~---~~~~~~did~~~~H~~g 408 (511)
.. .+.|.+.|+. ....+.. +.+- |... .++ ...+++.. .....+|||++|+|++.
T Consensus 194 ~~---------~~~p~vdg~~S~~~Yl~a-------~~~~---y~~y-~~~-~~~a~~~~~~~~~~~~~dfd~~~fH~P~ 252 (454)
T TIGR01833 194 LA---------SEYPVVDGKLSIQCYLSA-------LDRC---YKSY-CKK-IEKQWGKSGGDRKFTLNDFDYMVFHSPY 252 (454)
T ss_pred CC---------CcccccCCccCHHHHHHH-------HHHH---HHHH-HHH-HHHhhhhhccccCCCHhHcCEEeccCCc
Confidence 10 0112221110 0000000 0000 0011 111 11111110 01235799999999997
Q ss_pred hHHHHHH-HHHc---------------------------------------------CCCcccccchhhccccccccccc
Q 044260 409 RAVLDEL-EKNL---------------------------------------------QLSDRHMEPSRMTLYRFGNTSSS 442 (511)
Q Consensus 409 ~~vl~~i-~~~L---------------------------------------------gl~~e~~~~S~~~l~r~GNtsSa 442 (511)
.++-... .+.+ +...+|++||...-++.||+.++
T Consensus 253 ~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yta 332 (454)
T TIGR01833 253 CKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTA 332 (454)
T ss_pred ccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhh
Confidence 7666554 2222 11126788887777799999999
Q ss_pred hHHHHHHHHHHcCC--CCCCCEEEEEeeChHHHHhhhheEEec
Q 044260 443 SLWYELAYSEAKGR--IKRGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
Q Consensus 443 si~~~La~~~~~g~--l~~Gd~VlliafGsG~~~~s~v~r~~~ 483 (511)
|++..|.-+++..+ ...|+||.|++||||........+...
T Consensus 333 Slyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~ 375 (454)
T TIGR01833 333 SLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQ 375 (454)
T ss_pred HHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeC
Confidence 99999999997543 557999999999999776666655554
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=7.5e-28 Score=237.75 Aligned_cols=235 Identities=19% Similarity=0.172 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.++++++ .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 4567799999999999999999999999975 5666899999999999998 79999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCCcccc---ccceeeeEEeeEecCCCCcccceeec
Q 044260 255 HPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRSDRWR---SKYRLVHTVRTHKGADDKCFSCVTQQ 331 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~---~~~~L~~~v~t~~~~d~~~~~~v~~~ 331 (511)
+..+++||+++|. ++|||||+|+||++.+....+ ...++.+ .....++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~----- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS---TAATFDGASMV----- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEE---EEEcCCCCCCC-----
Confidence 9999999999998 589999999999986542211 1112222 12222221110
Q ss_pred cCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHH
Q 044260 332 EDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAV 411 (511)
Q Consensus 332 ~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~v 411 (511)
..... +.+. ...++.++.. ....+|+|+|++|+.+..+
T Consensus 140 --------~~~~~-------~~~~----------------------~~i~~~l~~a-----g~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 140 --------PAVSG-------EGLA----------------------RAARKALEGA-----GLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred --------CCCCh-------HHHH----------------------HHHHHHHHHc-----CCCHHHCCEEEccCCcCcc
Confidence 00000 0000 0112333321 2225799999999999999
Q ss_pred HHHHHHHcCCCccccc--chhhccccccccccchHHHHHHHHHHcCCCC-------CCCEEEEEeeChHHHHhhhhe
Q 044260 412 LDELEKNLQLSDRHME--PSRMTLYRFGNTSSSSLWYELAYSEAKGRIK-------RGDRTWQIAFGSGFKCNSAVW 479 (511)
Q Consensus 412 l~~i~~~Lgl~~e~~~--~S~~~l~r~GNtsSasi~~~La~~~~~g~l~-------~Gd~VlliafGsG~~~~s~v~ 479 (511)
++.+++.+++++++.. +...+..+|||++++|.++.|.......+.+ +||++++.++|.|++++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 178 GDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999999887774 3457889999999999999999998776665 899999999999999988764
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=6.3e-25 Score=225.43 Aligned_cols=252 Identities=17% Similarity=0.141 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCcCEEEEeecC-CCC---------------------CCcHHHHHHHHcCCCCCce
Q 044260 176 AECVMFGALDELFAKTSLK----PKDIGILIVNCSL-FNP---------------------TPSLSAMVINHYKLRGNIV 229 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~----p~dID~LIv~~s~-~~~---------------------~Ps~a~~I~~~LGl~~~~~ 229 (511)
..+|+..|++++|+++|++ +++||.||++++. .+. .|+.+.+|++.+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 3456799999999999999 9999999998753 332 788899999999994 68
Q ss_pred EEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCcCC----------C--Cc--chhhhhcccccccEEEE
Q 044260 230 SYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNWYFG----------N--ER--SMLVSNCLFRMGGAAIL 295 (511)
Q Consensus 230 ~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~----------~--dr--~~lv~~~lFgDGAaA~l 295 (511)
+++++ +||++++.||++|.++|++++.+++||+++|..+..+... . .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 89999 6999999999999999999999999999999876532110 0 00 11123579999999999
Q ss_pred EeccCCcccc---ccceeeeEEeeEecCCCCcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhh
Q 044260 296 LSNKRSDRWR---SKYRLVHTVRTHKGADDKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQL 372 (511)
Q Consensus 296 Ls~~~~~~~~---~~~~L~~~v~t~~~~d~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~ 372 (511)
|++.+....+ ...++.+. ....++..... + ... .+ .
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~---~~~~~~~~~~~------------~--~~~-----~~------------------~- 206 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGT---AATIDGAGMGA------------F--APS-----AE------------------G- 206 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEE---EEccCCCCCCC------------C--CcC-----HH------------------H-
Confidence 9976542111 11222221 12222211100 0 000 00 0
Q ss_pred HHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHHHHHHcCCCcccc--cchhhccccccccccchHHHHHHH
Q 044260 373 LFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDRHM--EPSRMTLYRFGNTSSSSLWYELAY 450 (511)
Q Consensus 373 ~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~--~~S~~~l~r~GNtsSasi~~~La~ 450 (511)
... ..+++++. .....+|||++++|+.|+.+.+.+++.++++.++. .+...+..+|||++++|.++.|..
T Consensus 207 --~~~-~i~~al~~-----agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~ 278 (332)
T cd00825 207 --LAR-AAKEALAV-----AGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDE 278 (332)
T ss_pred --HHH-HHHHHHHH-----cCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHH
Confidence 000 11233332 12235899999999999999999999988876642 133578899999999999999999
Q ss_pred HHHcCCCC-------------------------CCCEEEEEeeChHHHHhhhhe
Q 044260 451 SEAKGRIK-------------------------RGDRTWQIAFGSGFKCNSAVW 479 (511)
Q Consensus 451 ~~~~g~l~-------------------------~Gd~VlliafGsG~~~~s~v~ 479 (511)
+....+.+ +|++++++++|.|.+++++|+
T Consensus 279 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 279 AVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 98765555 889999999999999988764
No 39
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.78 E-value=1.3e-18 Score=161.46 Aligned_cols=168 Identities=23% Similarity=0.266 Sum_probs=125.5
Q ss_pred CCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHH
Q 044260 98 RPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAE 177 (511)
Q Consensus 98 ~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~ 177 (511)
||++|+|.+++.|.|+ .+++.+++.+.-+. +++ |+....|.++..+.++.| ...+|+
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E----D~vTmA------- 57 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE----DIVTMA------- 57 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS-----HHHHH-------
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc----cHHHHH-------
Confidence 7999999999999999 99999999887653 443 344445556667776665 245665
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCC--CCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKL--RGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl--~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
..|++++|++.+++|++|+.|+|+| |.....-+.+.+|++.||+ ..++..+|+. ++|-||..||..|.+++++
T Consensus 58 ---~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 58 ---ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp ---HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred ---HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 5556678899999999999 4568999999 5999999999999999999
Q ss_pred CC--CCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccC
Q 044260 255 HP--NSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKR 300 (511)
Q Consensus 255 ~~--~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~ 300 (511)
++ .+++|||++|+- + |...+ .+ ..-|-||.|+|++...
T Consensus 134 ~~~~g~~aLVVasDiA-~--y~~g~-~e----~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 134 SPWDGRKALVVASDIA-R--YDLGS-AE----PTQGAGAVAMLIGPNA 173 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-TG----GG-EEEEEEEEEECS-
T ss_pred CCCCCCeEEEEecccc-c--cCCCC-cc----ccccceeEEEEecCCC
Confidence 74 689999999994 3 33222 22 5779999999998753
No 40
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.78 E-value=1.6e-19 Score=151.47 Aligned_cols=83 Identities=34% Similarity=0.544 Sum_probs=75.1
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHh
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 475 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 475 (511)
.+|||+|++||.++++++.+.+.+|++++++ ..++++||||+|+|++++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 5899999999999999999999999999998 6799999999999999999999999999999999999999999999
Q ss_pred hhheEE
Q 044260 476 SAVWKA 481 (511)
Q Consensus 476 s~v~r~ 481 (511)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 41
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.77 E-value=8.9e-19 Score=160.76 Aligned_cols=119 Identities=24% Similarity=0.432 Sum_probs=90.7
Q ss_pred CCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHh-hcccccccccccccEEEecCCchHHHHH
Q 044260 336 GRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKL-KIKPYIPDFKLAFEHFCIHAGGRAVLDE 414 (511)
Q Consensus 336 g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~-~~~~~~~~~~~did~~~~H~~g~~vl~~ 414 (511)
.++.+.|++++|.+.++.++..+ ++++.. .++ ..|+.+|++|+||++|+++
T Consensus 24 ~Gf~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~g~~------~~~~~~wavHPGG~~ILd~ 75 (151)
T PF02797_consen 24 TGFHFILSKEVPDLISDNIPPFV----------------------EDLLARHGLS------DWDILFWAVHPGGRKILDA 75 (151)
T ss_dssp TEEEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGGTCC------SGGGSEEEEE-SSHHHHHH
T ss_pred CeEEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhhccc------ccccceeeecCChHHHHHH
Confidence 34788999999998766443222 122221 221 2355699999999999999
Q ss_pred HHHHcCCCcccccchhhccccccccccchHHHHHHHHHH----cCCCCC---CCEEEEEeeChHHHHhhhheEEe
Q 044260 415 LEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEA----KGRIKR---GDRTWQIAFGSGFKCNSAVWKAL 482 (511)
Q Consensus 415 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~----~g~l~~---Gd~VlliafGsG~~~~s~v~r~~ 482 (511)
+++.|+|+++++.+|+.+|++||||||+++++.|+++.+ +|.... +++++++|||+||+..++++|.+
T Consensus 76 v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 76 VEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 999999999999999999999999999999999999887 344333 48999999999999999999975
No 42
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.67 E-value=3.5e-15 Score=150.87 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHP 256 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~ 256 (511)
.+|+.+|+++||+++|++++|||.+|+++.+++ +..+..++++||++ .|++++ +|++++.||.+|..++++|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q--~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQ--IITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCc--ccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhCCC
Confidence 356699999999999999999999998875443 45688999999973 599996 99999999999999999999
Q ss_pred CCeEEEEEeccCCC---C--Cc-CC--CCcchhhhhcccccccEEEEEeccCC
Q 044260 257 NSYALVISMENITL---N--WY-FG--NERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 257 ~~~aLVVs~E~~s~---~--~~-~~--~dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
.++||||++|..|. . +. ++ ++|.. ..+|+|||+|+||++...
T Consensus 124 ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 124 ADRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCC
Confidence 99999999998872 1 11 22 45554 579999999999998654
No 43
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.67 E-value=2.5e-15 Score=151.60 Aligned_cols=316 Identities=17% Similarity=0.244 Sum_probs=210.6
Q ss_pred CCCCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHH
Q 044260 98 RPQPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAE 177 (511)
Q Consensus 98 ~~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~ 177 (511)
+|.+|.|.++-+|.|. .-|+++++..+-+. +.. .-..|+++....-... ||++.
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g--------KytIGLGq~~Mgfcsd------------rEDi~ 61 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG--------KYTIGLGQTQMGFCSD------------REDII 61 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCc----ccc--------ceEeccCcceecccCc------------hhhhh
Confidence 5779999999999999 78999999765432 111 1236777665432111 23344
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcC--CCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYK--LRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LG--l~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+...++.+++++-+|+++.|+-|-|+|. .-.-..|.-..+.+.++ =..++..+|..+ +|-||..||-.|-+++.+
T Consensus 62 Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiES 140 (462)
T KOG1393|consen 62 SLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIES 140 (462)
T ss_pred hhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhh
Confidence 45599999999999999999999999984 44556788788888887 455789999996 999999999999999998
Q ss_pred CC--CCeEEEEEeccCCCCCc-CCCCcchhhhhcccccccEEEEEeccCCccccccceeee-EEeeEecCCCCcccceee
Q 044260 255 HP--NSYALVISMENITLNWY-FGNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVH-TVRTHKGADDKCFSCVTQ 330 (511)
Q Consensus 255 ~~--~~~aLVVs~E~~s~~~~-~~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~-~v~t~~~~d~~~~~~v~~ 330 (511)
+. ++++|||++|+. .| .|+-| +.-|-||.|+|+++...- .+.. ...+|+.. .|+- |.
T Consensus 141 ssWDGr~aivV~gDIA---vY~~G~aR------pTGGAgAVAmLIgPnApi------~ferglr~thM~h---ayDF-yK 201 (462)
T KOG1393|consen 141 SSWDGRYAIVVCGDIA---VYAKGNAR------PTGGAGAVAMLIGPNAPI------IFERGLRATHMQH---AYDF-YK 201 (462)
T ss_pred cccCCceeEEEEeeEE---EecCCCCC------CCCCcceEEEEEcCCCce------Eecccchhhhhhh---hhhc-cC
Confidence 74 899999999983 23 24444 456999999999876542 1111 11223221 2321 22
Q ss_pred ccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHH-------HHHHHHHhhcccccccccccccEEE
Q 044260 331 QEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATL-------VARKVFKLKIKPYIPDFKLAFEHFC 403 (511)
Q Consensus 331 ~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~-------~~r~v~~~~~~~~~~~~~~did~~~ 403 (511)
| .+..+.|.|.|+- .+..|+.. ..+++-+...+. -++-.++||.++
T Consensus 202 P---------dl~SEyPvVDGkl-----------------Si~cYl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~i 254 (462)
T KOG1393|consen 202 P---------DLLSEYPVVDGKL-----------------SIQCYLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYII 254 (462)
T ss_pred C---------CCCCcCceecCee-----------------hHHHHHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeEE
Confidence 2 1223445444431 11112111 112222211111 122246899999
Q ss_pred ecCCchHHHHH------------------------------------------HHHHcCCCcccccchhhcccccccccc
Q 044260 404 IHAGGRAVLDE------------------------------------------LEKNLQLSDRHMEPSRMTLYRFGNTSS 441 (511)
Q Consensus 404 ~H~~g~~vl~~------------------------------------------i~~~Lgl~~e~~~~S~~~l~r~GNtsS 441 (511)
+|.+--++... ++-...+-.+|+.+|.-.-.+.||+.+
T Consensus 255 fHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYT 334 (462)
T KOG1393|consen 255 FHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYT 334 (462)
T ss_pred EeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCcccc
Confidence 99987665544 111223334577776666678999999
Q ss_pred chHHHHHHHHHHcC--CCCCCCEEEEEeeChHHHHhhhheEEecccC
Q 044260 442 SSLWYELAYSEAKG--RIKRGDRTWQIAFGSGFKCNSAVWKALRTIN 486 (511)
Q Consensus 442 asi~~~La~~~~~g--~l~~Gd~VlliafGsG~~~~s~v~r~~~~~~ 486 (511)
+|++..|+-++... .--.|.||.+.++|+|....-.-+|...+..
T Consensus 335 aSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 335 ASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred HHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 99999999988865 3347999999999999987777777666443
No 44
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.66 E-value=1.4e-15 Score=158.45 Aligned_cols=256 Identities=13% Similarity=0.049 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCCCcCEEEEeec------CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHH
Q 044260 175 EAECVMFGALDELFAKTS-LKPKDIGILIVNCS------LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDL 247 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~ag-i~p~dID~LIv~~s------~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~l 247 (511)
...+|+..|++++|++++ +++++||++|+.++ ++...|.++..++.++|+.....++++++ ||++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHHH
Confidence 345788999999999999 89999999997643 22334566889999999964577899995 99999999999
Q ss_pred HHHHHhcCCCCeEEEEEeccCCCC----CcC------CCCcchhhhhcccccccEEEEEeccCCccccccceeeeEEeeE
Q 044260 248 AKDLLQVHPNSYALVISMENITLN----WYF------GNERSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRTH 317 (511)
Q Consensus 248 A~~lL~~~~~~~aLVVs~E~~s~~----~~~------~~dr~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t~ 317 (511)
|.++|+.+..+.+||+++|.++.. ++. ..++.. ..+|||||+++||++.+....+ .-++.. ..
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~---G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSN---GFIPGEAAAAVLLGRPAGGEAP-GLPLLG---LG 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCC---ceeeeceEEEEEEccHhhhhcC-CCceEE---EE
Confidence 999999999999999999987641 110 122221 4699999999999976543211 112222 11
Q ss_pred ecCCCCcccceeeccCCCCCcccccchhhHHHHhhhhhhhhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccc
Q 044260 318 KGADDKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKL 397 (511)
Q Consensus 318 ~~~d~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~ 397 (511)
.+.+...+.. +.+.|. .++.+ .+.++.++++ .....+
T Consensus 216 ~~~~~~~~~~---------------~~~~p~-~g~gl--------------------------~~ai~~AL~~-agl~~~ 252 (348)
T PRK06147 216 LGREPAPVGE---------------SEDLPL-RGDGL--------------------------TQAIRAALAE-AGCGLE 252 (348)
T ss_pred EeecCCCccc---------------CCCCCC-ChHHH--------------------------HHHHHHHHHH-cCCCHH
Confidence 1222111100 000000 00000 0112222221 112257
Q ss_pred cccEEEecCCchHHHHHH-----HHHcCCCcccccchhhccccccccccchHHHHHHHHHH--cCCCCCCCEEEEEeeCh
Q 044260 398 AFEHFCIHAGGRAVLDEL-----EKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEA--KGRIKRGDRTWQIAFGS 470 (511)
Q Consensus 398 did~~~~H~~g~~vl~~i-----~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~--~g~l~~Gd~VlliafGs 470 (511)
|||+++.|..|....+.. .+.++-..+.. +-+.+-..+||+++++-.+++..... +...-+|+++++++-.-
T Consensus 253 dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~-~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 253 DMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFF-DLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HCCEEEcCCCCCccchHHHHHHHHHHhhhccCCC-ceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCC
Confidence 999999999877665443 33454322221 11345667999999999999886443 23455799999999887
Q ss_pred HHHHhhhheEEe
Q 044260 471 GFKCNSAVWKAL 482 (511)
Q Consensus 471 G~~~~s~v~r~~ 482 (511)
.-..++++++..
T Consensus 332 ~g~r~a~~l~~~ 343 (348)
T PRK06147 332 DGARAALVLEYR 343 (348)
T ss_pred CCceEEEEEecc
Confidence 777888888854
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.54 E-value=4e-13 Score=136.33 Aligned_cols=115 Identities=23% Similarity=0.267 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPN 257 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~ 257 (511)
+|+.+|+++||+++|++++|||.+|+++...+ +..+..+++.||+ +.|++.+ +|+++..||.+|..++++|..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCCC
Confidence 45699999999999999999999999875443 3568899999986 5999996 999999999999999999999
Q ss_pred CeEEEEEeccCCC---CCcC----CCCcchhhhhcccccccEEEEEeccCC
Q 044260 258 SYALVISMENITL---NWYF----GNERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 258 ~~aLVVs~E~~s~---~~~~----~~dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
++||||++|..+. .|.. |..|.. +...+++||+|+||++...
T Consensus 131 d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 131 DRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 9999999999875 2322 223332 3579999999999997654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.48 E-value=1.5e-12 Score=137.70 Aligned_cols=184 Identities=14% Similarity=0.167 Sum_probs=117.9
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccC-CCChhhHHHHHHHHHHhCCCcEE--eecCcc--cCCCCCccHHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTG-TFSQENLDFQRKILERSGLGEST--YLPEAV--LRVPPNPCMAEARK 174 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~-~~~~~~~~f~~ri~~~sGi~~r~--~~~~~~--~~~~~~~~ma~~~~ 174 (511)
++|+|+++|+..|. -.+.+++.+.+..-. .+.+-. +| +..+...+. ..+... ...++ .......
T Consensus 1 ~~i~I~G~g~~~p~---g~~~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~ 69 (406)
T cd00834 1 RRVVITGLGAVTPL---GNGVEEFWEALLAGRSGIRPIT-RF-----DASGFPSRIAGEVPDFDPEDYLDR--KELRRMD 69 (406)
T ss_pred CcEEEECcceeCCC---cCCHHHHHHHHHcCCCeeEECC-cc-----cccCCCccEEEEcCCCChhhcCCH--HHhccCC
Confidence 37999999999998 367788877653210 011000 00 011111111 111111 00111 1111122
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecC-C--------------------------CCCCcHHHHHHHHcC
Q 044260 175 EAECVMFGALDELFAKTSLKPKDIGI----LIVNCSL-F--------------------------NPTPSLSAMVINHYK 223 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~dID~----LIv~~s~-~--------------------------~~~Ps~a~~I~~~LG 223 (511)
...+++..|+++||+++|+++++||. ++++++. . ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 46678999999999999999876654 4444322 1 123557889999999
Q ss_pred CCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------------------CcCCC-Ccch
Q 044260 224 LRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN----------------------WYFGN-ERSM 280 (511)
Q Consensus 224 l~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------------------~~~~~-dr~~ 280 (511)
++ ..++.++ .+|++++.||..|.++|++|..++|||+++|..+.. ..+.. +++
T Consensus 150 l~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~- 225 (406)
T cd00834 150 LR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRD- 225 (406)
T ss_pred CC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCC-
Confidence 96 4788999 499999999999999999999999999999987610 11111 122
Q ss_pred hhhhcccccccEEEEEeccCC
Q 044260 281 LVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 281 lv~~~lFgDGAaA~lLs~~~~ 301 (511)
..++||||+|+||++.+.
T Consensus 226 ---g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 226 ---GFVLGEGAGVLVLESLEH 243 (406)
T ss_pred ---CEeeeccEEEEEEecHHH
Confidence 468999999999997654
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.46 E-value=2e-12 Score=136.51 Aligned_cols=93 Identities=12% Similarity=0.184 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|+++||+++|++++|||.+|++++ ++...|..+..+++.+|++.++++++++ ++|++++.+|.+|.+++++|
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~sG 101 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAAG 101 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999998864 4555778888899999998558899999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..++|||+++|.+|.
T Consensus 102 ~~~~vLv~g~e~~s~ 116 (386)
T cd00751 102 EADVVVAGGVESMSR 116 (386)
T ss_pred CCCeEEEeeeecccc
Confidence 999999999998653
No 48
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.39 E-value=6.5e-13 Score=109.14 Aligned_cols=66 Identities=23% Similarity=0.396 Sum_probs=55.4
Q ss_pred EEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCC
Q 044260 231 YNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 231 ~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
|||+ ++|++++.||++|.++++++..++||||++|..+. +.++.++.. ..+|||||+|+||++.++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESS
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCC
Confidence 7999 59999999999999999999999999999999988 555555553 369999999999999743
No 49
>PRK09051 beta-ketothiolase; Provisional
Probab=99.38 E-value=3.1e-11 Score=127.87 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-CcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPT-PSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|++++|+++|++|+|||.+|++|+ ++... +..+..+...+|++.++++++++ .+|++|+.|+.+|.+++++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~s 106 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAILL 106 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHHc
Confidence 356699999999999999999999999865 44433 34556666778997679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+++||+++|.+|.
T Consensus 107 G~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 107 GDADVAIGGGAESMSR 122 (394)
T ss_pred CCCCEEEEEeehhccc
Confidence 9999999999998874
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=3.1e-11 Score=127.86 Aligned_cols=93 Identities=16% Similarity=0.218 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++|+|||.+|++|+ +....|..+..++.++|++..+++++++ .+|++|+.++..|.+++++|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~sG 105 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRCG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHcC
Confidence 456699999999999999999999999875 3334566788899999998558999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+++||+++|.+|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 106 DAEVIIAGGQENMSL 120 (393)
T ss_pred CCCEEEEEEEhhhcc
Confidence 999999999997764
No 51
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=8.8e-11 Score=124.21 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC--CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNP--TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
.+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..++++++ ++|+++..+|..|.++++
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I~ 100 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAVA 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHHH
Confidence 456699999999999999999999998764 3332 467788999999997 68899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 044260 254 VHPNSYALVISMENIT 269 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s 269 (511)
+|..+++||+++|.++
T Consensus 101 sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 101 SGEADVVLAAGVEKMT 116 (389)
T ss_pred CCCCCEEEEEEEEecc
Confidence 9999999999999765
No 52
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=8.4e-11 Score=124.70 Aligned_cols=93 Identities=19% Similarity=0.240 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCcCEEEEeec-CCCCCCcHHHHHH-HHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 177 ECVMFGALDELFAKT-SLKPKDIGILIVNCS-LFNPTPSLSAMVI-NHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~a-gi~p~dID~LIv~~s-~~~~~Ps~a~~I~-~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
.+|+.+|++++|+++ |++|+|||.+|++++ ++...|...++++ ..+|++..+++++++ .+|++|+.|+..|.++++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 110 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRIR 110 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 456699999999997 999999999999864 4555555566654 555998458999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+.+||++.|.+|.
T Consensus 111 sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 111 VGEADVMIAAGVESMSM 127 (399)
T ss_pred CCCCCEEEEEEEecccc
Confidence 99999999999998864
No 53
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=1.4e-10 Score=122.57 Aligned_cols=91 Identities=15% Similarity=0.063 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNP--TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|+++||+++|++++|||.+|++++++.. .+..+..|+++||++ ..+++++++ +|+++..++..|.++|++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~s 102 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQS 102 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHHC
Confidence 3566999999999999999999999988654332 122336899999997 688999995 999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 044260 255 HPNSYALVISMENIT 269 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s 269 (511)
|..++||||++|..+
T Consensus 103 G~~~~vLVvg~e~~s 117 (386)
T PRK08313 103 GVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCEEEEEEEEEcc
Confidence 999999999999764
No 54
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.31 E-value=1.2e-10 Score=122.20 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
..+|+.+|++++|+++|++++|||.++++++ .....|..+.++++++|++ ++.+++++ .+|++++.++..|.+++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 3456799999999999999999999998765 4433577789999999997 78999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..++|||+++|.++.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 55
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.30 E-value=7e-11 Score=125.97 Aligned_cols=121 Identities=14% Similarity=0.157 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC-CCC-------------------CCcHHHHHHHHcCCCCCceEE
Q 044260 176 AECVMFGALDELFAKTSLKPKDIG----ILIVNCSL-FNP-------------------TPSLSAMVINHYKLRGNIVSY 231 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID----~LIv~~s~-~~~-------------------~Ps~a~~I~~~LGl~~~~~~~ 231 (511)
...++..|+++||+++|+++++|| .||++++. ++. .+..+..|+..+|++ ..++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 456899999999999999999999 78877542 221 345678899999997 3789
Q ss_pred EecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------CcC------CCCcchhhhhcccccccEEEE
Q 044260 232 NLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN----------WYF------GNERSMLVSNCLFRMGGAAIL 295 (511)
Q Consensus 232 dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~------~~dr~~lv~~~lFgDGAaA~l 295 (511)
.++. +|++++.||..|.++|++|..+++||+++|..... +.. .-|.. -...++||||+|+|
T Consensus 165 ~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaalV 241 (424)
T smart00825 165 TVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVVV 241 (424)
T ss_pred cccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEEE
Confidence 9995 99999999999999999999999999999974320 000 01111 02468999999999
Q ss_pred EeccCC
Q 044260 296 LSNKRS 301 (511)
Q Consensus 296 Ls~~~~ 301 (511)
|++.+.
T Consensus 242 Le~~e~ 247 (424)
T smart00825 242 LKRLSD 247 (424)
T ss_pred EccHHH
Confidence 997543
No 56
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.27 E-value=1.7e-10 Score=122.44 Aligned_cols=123 Identities=12% Similarity=0.083 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC-cC----EEEEeecCC-----------------------CCC--CcHHHHHHHHcCC
Q 044260 175 EAECVMFGALDELFAKTSLKPKD-IG----ILIVNCSLF-----------------------NPT--PSLSAMVINHYKL 224 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~d-ID----~LIv~~s~~-----------------------~~~--Ps~a~~I~~~LGl 224 (511)
....++..|+++||+++|+++++ ++ .++++++.. ... ...+..|...||+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678999999999999998766 33 233333210 111 4567889999999
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC--------------------CcCCCCcchhhhh
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN--------------------WYFGNERSMLVSN 284 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~--------------------~~~~~dr~~lv~~ 284 (511)
+ .-+++.+++ +|++++.||..|.++|++|..+.+||.++|..+.. ...+.|+.. ..
T Consensus 151 ~-~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~--~G 226 (407)
T cd00828 151 S-HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR--DG 226 (407)
T ss_pred C-CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--Cc
Confidence 3 257899995 99999999999999999999999999999986510 000111110 24
Q ss_pred cccccccEEEEEeccCC
Q 044260 285 CLFRMGGAAILLSNKRS 301 (511)
Q Consensus 285 ~lFgDGAaA~lLs~~~~ 301 (511)
+++||||+|+||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 68999999999998654
No 57
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.26 E-value=2.8e-10 Score=120.63 Aligned_cols=121 Identities=12% Similarity=0.083 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecCC------------------C--------CCC-cHHHHHHHHcCC
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGI----LIVNCSLF------------------N--------PTP-SLSAMVINHYKL 224 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~----LIv~~s~~------------------~--------~~P-s~a~~I~~~LGl 224 (511)
..+++..|++++|+++|+++++||. ++++++.. . ..+ ..+..|...+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4678899999999999999999886 55554211 0 011 245678899999
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------Cc---C--------CCCcchhhh
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN----------WY---F--------GNERSMLVS 283 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~---~--------~~dr~~lv~ 283 (511)
+ ..++.+.. +|++++.||..|.++|++|..+.+||++.|..... .. . .-|... .
T Consensus 151 ~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~--~ 225 (407)
T TIGR03150 151 K--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR--D 225 (407)
T ss_pred C--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC--C
Confidence 6 57888885 99999999999999999999999999999963210 00 0 001110 1
Q ss_pred hcccccccEEEEEeccCC
Q 044260 284 NCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 284 ~~lFgDGAaA~lLs~~~~ 301 (511)
..++||||+|+||++.+.
T Consensus 226 g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 226 GFVMGEGAGVLVLEELEH 243 (407)
T ss_pred cEEEeceEEEEEEeeHHH
Confidence 357899999999997654
No 58
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.25 E-value=8.6e-10 Score=118.05 Aligned_cols=180 Identities=16% Similarity=0.175 Sum_probs=111.6
Q ss_pred CcEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHH
Q 044260 101 PVYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAEC 178 (511)
Q Consensus 101 ~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~ 178 (511)
+|.|.++|+-.|- -.+.+++.+.+.. |. +.+-. + +...++..+....-+.. ++.. .. .......
T Consensus 12 ~VvITG~G~vs~~---G~~~~~~~~~L~~-G~s~i~~~~-~-----~~~~~~~~~~~g~~~~~--~~~~-~~-~~~~~~~ 77 (425)
T PRK06501 12 IVAVTGMGVVTSL---GQGKADNWAALTA-GESGIHTIT-R-----FPTEGLRTRIAGTVDFL--PESP-FG-ASALSEA 77 (425)
T ss_pred CEEEEeeeEECCC---CCCHHHHHHHHHc-CCCceEcCC-c-----ccccCCCCceEEEEeec--cccc-cc-ccCHHHH
Confidence 6999999999987 4678888876542 11 00000 0 01112211110000000 0000 00 0112356
Q ss_pred HHHHHHHHHHHhCCCCCCCcC------------------EEEEeec----------------CCC-------CCCcHHHH
Q 044260 179 VMFGALDELFAKTSLKPKDIG------------------ILIVNCS----------------LFN-------PTPSLSAM 217 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p~dID------------------~LIv~~s----------------~~~-------~~Ps~a~~ 217 (511)
++..|++++|+++|+++.+.+ .++..+. +.. ..|+.+..
T Consensus 78 ~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (425)
T PRK06501 78 LARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADR 157 (425)
T ss_pred HHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHH
Confidence 788999999999999654422 1112111 011 34678999
Q ss_pred HHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEecc---------------CCCCC-------cCC
Q 044260 218 VINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMEN---------------ITLNW-------YFG 275 (511)
Q Consensus 218 I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~---------------~s~~~-------~~~ 275 (511)
|+.+||++ ..+++++. +|++++.||..|.++|++|..+.+||+++|. ++... .+.
T Consensus 158 i~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpf 234 (425)
T PRK06501 158 LADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPF 234 (425)
T ss_pred HHHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCC
Confidence 99999996 57899995 9999999999999999999999999999993 22100 000
Q ss_pred -CCcchhhhhcccccccEEEEEeccCC
Q 044260 276 -NERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 276 -~dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
.+|+ ..++||||+|+||++.+.
T Consensus 235 d~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 235 SKDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCCC----CeeeeccEEEEEECcHHH
Confidence 2333 368999999999997554
No 59
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.23 E-value=7.7e-10 Score=111.99 Aligned_cols=115 Identities=17% Similarity=0.263 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPN 257 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~ 257 (511)
+|+.+|+++||+++|++++|||.+++++......|+ ..++++||++ .+++.+ +||++..||.+|..++++|..
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcCCC
Confidence 477999999999999999999999999877666776 4999999954 599996 999999999999999999999
Q ss_pred CeEEEEEeccCCC---CCcC----CCCcchhhhhcccccccEEEEEeccCC
Q 044260 258 SYALVISMENITL---NWYF----GNERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 258 ~~aLVVs~E~~s~---~~~~----~~dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
++|||+++-..+. .|.. +..|.. +...---||+|+||++...
T Consensus 129 d~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 129 KYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred CEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCCC
Confidence 9999999766542 2322 223331 2334457899999987643
No 60
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.21 E-value=7.6e-10 Score=117.35 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFNP--TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
+++|+..+++.+++++|++|++||-||++|..... .+.++.++.-+-|++.+++++-|+ +.|++++.|+.+|.+.++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 45667999999999999999999999999863322 477889999999999899999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+.+|+.+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999995
No 61
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=9e-10 Score=116.76 Aligned_cols=90 Identities=17% Similarity=0.287 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC---CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNP---TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~---~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
.+|+.+|++++|+++|++|+|||.+|+++. ++.. .++....+...++ .++++++++ ++|++|+.++..|.+++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~I 109 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAMEI 109 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHHH
Confidence 356699999999999999999999999874 3322 2344445555565 468999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCC
Q 044260 253 QVHPNSYALVISMENIT 269 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s 269 (511)
++|..+++||+++|.+|
T Consensus 110 ~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 110 ATGMADIVIAGGVEHMT 126 (394)
T ss_pred HcCCCCEEEEeeecccc
Confidence 99999999999999766
No 62
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.18 E-value=1.8e-09 Score=114.70 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeec-CCC-------------------CCCcHHHHHHHHcCCCCCceE
Q 044260 175 EAECVMFGALDELFAKTSLKPKDIGI----LIVNCS-LFN-------------------PTPSLSAMVINHYKLRGNIVS 230 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~dID~----LIv~~s-~~~-------------------~~Ps~a~~I~~~LGl~~~~~~ 230 (511)
....++..|++++|+++|++++++|. ++++++ .++ ..+..+..|+..+|++ ..+
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 35789999999999999999888774 555543 111 1245678899999997 488
Q ss_pred EEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC-----------------CcCC-CCcchhhhhcccccccE
Q 044260 231 YNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN-----------------WYFG-NERSMLVSNCLFRMGGA 292 (511)
Q Consensus 231 ~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----------------~~~~-~dr~~lv~~~lFgDGAa 292 (511)
+.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ..+. .+++ ..++||||+
T Consensus 164 ~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~----g~~~geGAa 238 (421)
T cd00833 164 LTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADAD----GYVRGEGVG 238 (421)
T ss_pred eeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCC----CeeeeceEE
Confidence 99995 99999999999999999999999999999975310 0011 1122 468999999
Q ss_pred EEEEeccCC
Q 044260 293 AILLSNKRS 301 (511)
Q Consensus 293 A~lLs~~~~ 301 (511)
|+||++.+.
T Consensus 239 alvL~~~~~ 247 (421)
T cd00833 239 VVVLKRLSD 247 (421)
T ss_pred EEEEeeHHH
Confidence 999997654
No 63
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.16 E-value=4.1e-09 Score=112.09 Aligned_cols=185 Identities=11% Similarity=0.058 Sum_probs=115.2
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEE--eecCcc--cCCCCCccHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGEST--YLPEAV--LRVPPNPCMAEAR 173 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~--~~~~~~--~~~~~~~~ma~~~ 173 (511)
++|.|+|+||..|- -.+.+++.+.+.. |. +.+-. +| ...+...+. ..+... ...++ .+ ....
T Consensus 2 ~~v~ItG~g~~~p~---g~~~~~~w~~l~~-g~~~~~~~~-~~-----~~~~~~~~~~g~i~~f~~~~~~~~-~~-~~~~ 69 (411)
T PRK07314 2 RRVVVTGLGAVSPL---GNDVESTWKNLLA-GKSGIGPIT-HF-----DTSDLAVKIAGEVKDFNPDDYMSR-KE-ARRM 69 (411)
T ss_pred CcEEEEcceEECCC---cCCHHHHHHHHHh-CCCcEEECC-cc-----cccCCCccEEEEeCCcChhhcCCH-HH-hhcC
Confidence 47999999999997 4688888886542 11 11000 00 011111110 011000 00111 00 0111
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecCCC--------------------------CCCc-HHHHHHHHc
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIG----ILIVNCSLFN--------------------------PTPS-LSAMVINHY 222 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID----~LIv~~s~~~--------------------------~~Ps-~a~~I~~~L 222 (511)
.....++..|++++|+++|++++++| .++++++... ..++ .+..|...+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 23467889999999999999999888 4666543110 1122 456799999
Q ss_pred CCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC---------------------cCCCCcchh
Q 044260 223 KLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNW---------------------YFGNERSML 281 (511)
Q Consensus 223 Gl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~---------------------~~~~dr~~l 281 (511)
|++ -.++-+.. +|++++.||..|.++|++|..+.|||.+.|..+..+ ...-|+..
T Consensus 150 gl~--Gp~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~- 225 (411)
T PRK07314 150 GAK--GPNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR- 225 (411)
T ss_pred CCC--Cccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC-
Confidence 997 46778884 999999999999999999999999999999743210 00001110
Q ss_pred hhhcccccccEEEEEeccCC
Q 044260 282 VSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 282 v~~~lFgDGAaA~lLs~~~~ 301 (511)
..+++||||+|+||++.+.
T Consensus 226 -dG~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 226 -DGFVMGEGAGILVLEELEH 244 (411)
T ss_pred -CCEeEEceEEEEEEeeHHH
Confidence 1368999999999997653
No 64
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.09 E-value=6.1e-09 Score=109.02 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
+++|+..|++++++ |++ +|||.+|+++.... .+..+..+....|++.+++++.++ .+|++|+.++..|.+.+++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 35677999999865 896 89999999865321 244455688999998679999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+.+||++.|.+|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999874
No 65
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.09 E-value=4.3e-10 Score=118.95 Aligned_cols=93 Identities=17% Similarity=0.257 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|+++||+++|++++|||.+|+++. ++...|..+..++.++|++.++++++++ .+|++++.++.+|.+++++|
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~sG 100 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRAG 100 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999998764 4444577788899999998568999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+++||+++|.+|.
T Consensus 101 ~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 101 EADVVVAGGVESMSR 115 (386)
T ss_pred CCCEEEEEEehhhcc
Confidence 999999999998775
No 66
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.08 E-value=6.1e-09 Score=111.34 Aligned_cols=119 Identities=14% Similarity=0.119 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCc-C----EEEEeecCC----------------------C----CCC-cHHHHHHHHcC
Q 044260 176 AECVMFGALDELFAKTSLKPKDI-G----ILIVNCSLF----------------------N----PTP-SLSAMVINHYK 223 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dI-D----~LIv~~s~~----------------------~----~~P-s~a~~I~~~LG 223 (511)
...++..|++++|+++|++++++ + .++++++.. . ..+ ..+..|...||
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 56788999999999999988776 3 344544311 0 011 23667899999
Q ss_pred CCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------cC------------C--CCcc
Q 044260 224 LRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNW----------YF------------G--NERS 279 (511)
Q Consensus 224 l~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~------------~--~dr~ 279 (511)
++ -+++-++. +|++++.||..|.++|++|..+.+||+++|.....+ +. + .+|+
T Consensus 162 l~--Gp~~~v~~-aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~ 238 (424)
T PRK06333 162 FK--GPLGAPVT-ACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRD 238 (424)
T ss_pred CC--CCCccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCC
Confidence 96 57778884 999999999999999999999999999999732100 00 0 1122
Q ss_pred hhhhhcccccccEEEEEeccCC
Q 044260 280 MLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 280 ~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
..+.||||+++||++.+.
T Consensus 239 ----G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 239 ----GFVMGEGAGILVIETLEH 256 (424)
T ss_pred ----CeEEecceEEEEEeeHHH
Confidence 357899999999987543
No 67
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=6.6e-10 Score=117.65 Aligned_cols=93 Identities=16% Similarity=0.216 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCc-HHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPS-LSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|++++|+++|++|+|||.+|+++. ++...|+ .+..+..++|++.++++++++ ++|++|+.|+.+|.+++++
T Consensus 28 ~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~s 106 (392)
T PRK07108 28 ATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVIA 106 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHHC
Confidence 456699999999999999999999999864 4555554 788999999998779999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.+|+++.|.+|.
T Consensus 107 G~~d~vlagGvE~ms~ 122 (392)
T PRK07108 107 GEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCEEEEEEEeccCC
Confidence 9999999999999985
No 68
>PRK08256 lipid-transfer protein; Provisional
Probab=99.05 E-value=1.1e-08 Score=108.41 Aligned_cols=88 Identities=15% Similarity=0.175 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|+++||+++|++++|||.+++++.. +... ...+...+|++ ++++++++ .+|++++.+|..|.++|++|
T Consensus 23 ~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 23 PDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHCC
Confidence 3566999999999999999999999887643 2211 23567889997 57889999 59999999999999999999
Q ss_pred CCCeEEEEEeccCC
Q 044260 256 PNSYALVISMENIT 269 (511)
Q Consensus 256 ~~~~aLVVs~E~~s 269 (511)
..++|||+++|.++
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999865
No 69
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.05 E-value=1.2e-08 Score=108.26 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLF-NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++++|||.+|+++... ...+..+..+...+|++.+++++.++ .+|+++..++..|.+.+++|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~sG 104 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQLG 104 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHcC
Confidence 45679999999999999999999999876421 11334556788999997668899999 59999999999999999999
Q ss_pred CCCeEEEEEeccCC
Q 044260 256 PNSYALVISMENIT 269 (511)
Q Consensus 256 ~~~~aLVVs~E~~s 269 (511)
..+.+||++.|.+|
T Consensus 105 ~~d~vlv~G~E~~s 118 (394)
T PLN02644 105 INDVVVAGGMESMS 118 (394)
T ss_pred CCCEEEEEeEEecC
Confidence 99999999988775
No 70
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.04 E-value=8e-10 Score=117.52 Aligned_cols=93 Identities=16% Similarity=0.199 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++|+|||.+|++++ +....|..+.+++..+|++.++++++++ .+|++|+.++..|.+++++|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~sG 105 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQTG 105 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHcC
Confidence 456699999999999999999999999975 5556688888999999998678999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+.+||++.|.+|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 106 AADVVIAGGAESMSN 120 (404)
T ss_pred CCCEEEEeeehhhcc
Confidence 999999999999885
No 71
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1.1e-09 Score=116.03 Aligned_cols=93 Identities=14% Similarity=0.151 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++++++++ .+|++|+.|+..|.+++++|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~sG 105 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999999875 3212344556789999997679999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+++||+++|.+|.
T Consensus 106 ~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 106 DASVIVAGGMESMSN 120 (393)
T ss_pred CCCEEEEEeeecccc
Confidence 999999999999886
No 72
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.02 E-value=1.5e-09 Score=115.24 Aligned_cols=94 Identities=13% Similarity=0.238 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-CcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPT-PSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~-Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
+.+|+..|++++|+++|++|+|||.+|++|. +.... +..+.......|++.++++++++ ++|++|+.||.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 3456699999999999999999999999875 43333 34556677888997679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+++||+++|.+|+
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999986
No 73
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.01 E-value=2.3e-08 Score=106.47 Aligned_cols=120 Identities=16% Similarity=0.166 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecCC--------------------------CCCC-cHHHHHHHHcC
Q 044260 175 EAECVMFGALDELFAKTSLKPKDIGI----LIVNCSLF--------------------------NPTP-SLSAMVINHYK 223 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~dID~----LIv~~s~~--------------------------~~~P-s~a~~I~~~LG 223 (511)
....++..|++++|+++|+++++++. ++++++.. ...| ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 35788999999999999999877763 44433210 0112 46778999999
Q ss_pred CCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-CCC---------Cc-----------CC--CCcch
Q 044260 224 LRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENI-TLN---------WY-----------FG--NERSM 280 (511)
Q Consensus 224 l~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~-s~~---------~~-----------~~--~dr~~ 280 (511)
++. .++.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. .. .+ .+|+
T Consensus 151 l~G--p~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~- 226 (406)
T PRK08439 151 LKG--PNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRD- 226 (406)
T ss_pred CCC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCC-
Confidence 984 677888 499999999999999999999999999999963 210 00 00 1223
Q ss_pred hhhhcccccccEEEEEeccCC
Q 044260 281 LVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 281 lv~~~lFgDGAaA~lLs~~~~ 301 (511)
..++|+||+++||++.+.
T Consensus 227 ---G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 227 ---GFVMGEGAGALVLEEYES 244 (406)
T ss_pred ---cEEeeCceEEEEEccHHH
Confidence 368899999999987554
No 74
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.98 E-value=5.5e-08 Score=103.87 Aligned_cols=121 Identities=11% Similarity=0.098 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC-C-----------------C--------CCC-cHHHHHHHHcCC
Q 044260 176 AECVMFGALDELFAKTSLKPKDIG----ILIVNCSL-F-----------------N--------PTP-SLSAMVINHYKL 224 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID----~LIv~~s~-~-----------------~--------~~P-s~a~~I~~~LGl 224 (511)
...++..|+.++|+++|+++++.+ .++++++. . . ..| ..+..|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 456889999999999999754433 24444421 0 0 112 367889999999
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------cC-----------CCCcchhhh
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNW----------YF-----------GNERSMLVS 283 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~-----------~~dr~~lv~ 283 (511)
+. +++.++. +|++++.||..|.++|+.|..+.+||.++|.....+ .. +-|+.. .
T Consensus 154 ~G--p~~ti~~-aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 228 (414)
T PRK08722 154 RG--PNIAIST-ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR--D 228 (414)
T ss_pred CC--Ccccccc-ccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--C
Confidence 84 7888895 999999999999999999999999999999853210 10 001110 1
Q ss_pred hcccccccEEEEEeccCC
Q 044260 284 NCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 284 ~~lFgDGAaA~lLs~~~~ 301 (511)
..+.|||++++||.+...
T Consensus 229 G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred ceEeeceEEEEEEccHHH
Confidence 467899999999987654
No 75
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=2.6e-09 Score=112.97 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++++|||.+|++++. ....+..+..++..+|++ +..+++++ ++|++++.+|..|..++++|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~sG 99 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVASG 99 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHCC
Confidence 3466999999999999999999999988643 222233468899999998 46789999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..++||||++|.+|.
T Consensus 100 ~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 100 LVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999998663
No 76
>PRK06059 lipid-transfer protein; Provisional
Probab=98.97 E-value=2e-09 Score=114.28 Aligned_cols=92 Identities=13% Similarity=0.065 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-C-CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|+++||+++|++++|||.||++++ + .+..+..+..+++++|++ +++++++++ +|++++.+|..|.+++++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHHC
Confidence 456699999999999999999999998764 2 333456678999999997 588999995 999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..++|||+++|.++.
T Consensus 102 G~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 102 GLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCEEEEEEEcccCC
Confidence 9999999999998763
No 77
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.94 E-value=3.6e-09 Score=113.31 Aligned_cols=93 Identities=14% Similarity=0.283 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++++|||.+|++|. +....+..+..++..+|++.++++++++ .+|++++.++..|.+++++|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~sG 106 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIALG 106 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999998864 3223467788899999997568999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+++||+++|.+|.
T Consensus 107 ~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 107 RADLVLAGGVEAMSH 121 (426)
T ss_pred CCCEEEEEEEecccC
Confidence 999999999998775
No 78
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.92 E-value=2.6e-08 Score=106.19 Aligned_cols=121 Identities=15% Similarity=0.263 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCCcCEEEEeec----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 044260 176 AECVMFGALDELFAKTSLK---PKDIGILIVNCS----------------LFNPTP---------SLSAMVINHYKLRGN 227 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~---p~dID~LIv~~s----------------~~~~~P---------s~a~~I~~~LGl~~~ 227 (511)
...++..|++++|+++|++ +++|++++-++. +....| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 4578899999999999986 567777664432 111112 2566788999997
Q ss_pred ceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CCCC----C------------------cCCCCcchhhhh
Q 044260 228 IVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMEN-ITLN----W------------------YFGNERSMLVSN 284 (511)
Q Consensus 228 ~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~-~s~~----~------------------~~~~dr~~lv~~ 284 (511)
.+++.+++ +|++++.||..|.++|++|..+.+||+++|. .+.. + ..+-|+.. ..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--DG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--CC
Confidence 36788995 9999999999999999999999999999864 2110 0 00011110 13
Q ss_pred cccccccEEEEEeccCC
Q 044260 285 CLFRMGGAAILLSNKRS 301 (511)
Q Consensus 285 ~lFgDGAaA~lLs~~~~ 301 (511)
.++||||+|+||++.+.
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 68899999999997654
No 79
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.91 E-value=6.1e-08 Score=103.23 Aligned_cols=187 Identities=14% Similarity=0.143 Sum_probs=111.8
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCCCChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHH--HHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGTFSQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEAR--KEAE 177 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~~~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~--~ea~ 177 (511)
++|.|+|+|+-.|- -.+.+++.+.+.. |. .-++.+.+.-...++..+....-.....+........| ....
T Consensus 2 ~~VvITG~g~vtp~---G~~~~~~~~~L~~-g~---s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~ 74 (405)
T PRK09116 2 RRVVVTGMGGVTAL---GEDWQTIAARLKA-GR---NAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVS 74 (405)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CC---CCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHH
Confidence 46999999999987 4778888876532 11 00000000000012222211110000000000011111 1245
Q ss_pred HHHHHHHHHHHHhCCCCC------CCcCEEEEeecC-C-----------------C--------CCCc-HHHHHHHHcCC
Q 044260 178 CVMFGALDELFAKTSLKP------KDIGILIVNCSL-F-----------------N--------PTPS-LSAMVINHYKL 224 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p------~dID~LIv~~s~-~-----------------~--------~~Ps-~a~~I~~~LGl 224 (511)
.++..|+++||+++|+.. +++++ +++++. . . ..|+ .+..|...||+
T Consensus 75 ~~al~aa~~Al~dAGl~~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 75 LMATRASELALEDAGLLGDPILTDGRMGI-AYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCcEEE-EEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 688999999999999842 33444 444321 0 0 1232 57789999999
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----C-----c-----------CC--CCcchhh
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN----W-----Y-----------FG--NERSMLV 282 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~----~-----~-----------~~--~dr~~lv 282 (511)
+. +++-+++ +|++++.||..|.++|+.|..+.+||.++|.++.. + . .+ .+|+
T Consensus 154 ~G--p~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~--- 227 (405)
T PRK09116 154 KG--RVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRD--- 227 (405)
T ss_pred CC--Ccccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCC---
Confidence 84 7888995 99999999999999999999999999999975420 0 0 00 1122
Q ss_pred hhcccccccEEEEEeccCC
Q 044260 283 SNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 283 ~~~lFgDGAaA~lLs~~~~ 301 (511)
..+.|+||+++||++.+.
T Consensus 228 -G~v~gEGa~~~vLe~~~~ 245 (405)
T PRK09116 228 -GLVIGEGAGTLVLEELEH 245 (405)
T ss_pred -CEeeeccEEEEEEccHHH
Confidence 468899999999996543
No 80
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.90 E-value=6e-09 Score=110.47 Aligned_cols=93 Identities=12% Similarity=0.089 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHH-HHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAM-VINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~-I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
+.+++.+|++++|+++|++|+|||.+|++++ ++...+..+.. +++.+|+. ++++++++ .+|++|+.++..|.++++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 3567799999999999999999999999875 44434555553 67788886 79999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
No 81
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.89 E-value=7.2e-09 Score=109.99 Aligned_cols=93 Identities=16% Similarity=0.191 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
++|+.+|++++|+++|++|+|||.+|++++ +.....+.+......+|++.++++++++ ++|++|+.|+..|.+++++|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~sG 110 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVAG 110 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHCC
Confidence 456699999999999999999999999865 3333334444455567777679999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+++||++.|.+|.
T Consensus 111 ~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 111 SVDVIVAGGMESMTN 125 (397)
T ss_pred CCCEEEEEeeeccCC
Confidence 999999999999884
No 82
>PRK05790 putative acyltransferase; Provisional
Probab=98.87 E-value=1e-08 Score=108.69 Aligned_cols=93 Identities=10% Similarity=0.132 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|+++||+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++ .+|++++.++..|.+++++|
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~sG 105 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHcC
Confidence 456699999999999999999999998864 2222344455677788997568899999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+++||++.|.+|.
T Consensus 106 ~~d~vLv~G~e~~s~ 120 (393)
T PRK05790 106 DADIVVAGGQESMSQ 120 (393)
T ss_pred CCCEEEEEeeecccc
Confidence 999999999998754
No 83
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.87 E-value=9.9e-09 Score=103.09 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.++|+..|++++|++++++|++||.||++|. +....+..+..+.-..|++.+++++.++ +.|++|+.|+..|...+++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 4567799999999999999999999999985 4444777888888899998889999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCCC
Q 044260 255 HPNSYALVISMENITLN 271 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~~ 271 (511)
|..+.+|+++.|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999873
No 84
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85 E-value=1.7e-07 Score=99.07 Aligned_cols=116 Identities=19% Similarity=0.261 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhCCCCC--CCcCEEEEeecCC----------------------------CCCC-cHHHHHHHHcCCCCC
Q 044260 179 VMFGALDELFAKTSLKP--KDIGILIVNCSLF----------------------------NPTP-SLSAMVINHYKLRGN 227 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p--~dID~LIv~~s~~----------------------------~~~P-s~a~~I~~~LGl~~~ 227 (511)
++..|+++||+++|+++ +++++++-.+... ...| ..+..|...+|++.
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G- 137 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG- 137 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC-
Confidence 44688999999999964 5666554322110 0122 24677899999984
Q ss_pred ceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CCCCC---------------cCC-CCcchhhhhcccccc
Q 044260 228 IVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMEN-ITLNW---------------YFG-NERSMLVSNCLFRMG 290 (511)
Q Consensus 228 ~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~-~s~~~---------------~~~-~dr~~lv~~~lFgDG 290 (511)
+++-+.+ +|++++.||..|.++|+.|..+.+||.++|. ++... .+. .+|+ ..++|||
T Consensus 138 -p~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~gEG 211 (381)
T PRK05952 138 -PVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLGEG 211 (381)
T ss_pred -ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Ccccccc
Confidence 7888995 9999999999999999999999999999996 43210 011 1223 3689999
Q ss_pred cEEEEEeccCC
Q 044260 291 GAAILLSNKRS 301 (511)
Q Consensus 291 AaA~lLs~~~~ 301 (511)
|+++||++.+.
T Consensus 212 aa~lvLe~~~~ 222 (381)
T PRK05952 212 GAILVLESAEL 222 (381)
T ss_pred EEEEEEeeHHH
Confidence 99999997653
No 85
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.85 E-value=2.2e-07 Score=102.06 Aligned_cols=181 Identities=15% Similarity=0.163 Sum_probs=110.8
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEEe--ec---CcccCCCCCccHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGESTY--LP---EAVLRVPPNPCMAEA 172 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~--~~---~~~~~~~~~~~ma~~ 172 (511)
++|.|+|+|+..|- -.+.+++.+.+.. |. +.+- -+| ....+..+.. .+ +..+ . .......
T Consensus 129 ~rVvITG~G~vtp~---G~~~~~~w~~L~~-G~s~i~~~-~~f-----~~~~~~~~~ag~i~~f~~~~~-l--~~k~~r~ 195 (540)
T PLN02787 129 RRVVVTGMGVVSPL---GHDPDVFYNNLLE-GVSGISEI-ERF-----DCSQFPTRIAGEIKSFSTDGW-V--APKLSKR 195 (540)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCccccc-Ccc-----chhhCCccccccccccChhhc-C--CHHHHHh
Confidence 58999999999998 3677888776532 11 1100 000 0011111100 00 0000 0 0111111
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCC--------CcCEEEEeecCC-------------------CC------CC-cHHHHH
Q 044260 173 RKEAECVMFGALDELFAKTSLKPK--------DIGILIVNCSLF-------------------NP------TP-SLSAMV 218 (511)
Q Consensus 173 ~~ea~~l~~~Aa~~aL~~agi~p~--------dID~LIv~~s~~-------------------~~------~P-s~a~~I 218 (511)
......++..|++++|+++|++++ .++ |+++++.. .+ .+ ..+.+|
T Consensus 196 md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 274 (540)
T PLN02787 196 MDKFMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAML 274 (540)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHH
Confidence 123456888999999999999764 233 44544310 00 11 235678
Q ss_pred HHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-CCC----C-----c-----------CC--
Q 044260 219 INHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENI-TLN----W-----Y-----------FG-- 275 (511)
Q Consensus 219 ~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~-s~~----~-----~-----------~~-- 275 (511)
...+|++ -+++.+++ +|++++.||..|.++|+.|..+.+||.++|.. +.. + . .+
T Consensus 275 a~~~gl~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD 351 (540)
T PLN02787 275 AMDLGWM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWD 351 (540)
T ss_pred HHHhCCC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcc
Confidence 9999997 47888895 99999999999999999999999999999962 210 0 0 00
Q ss_pred CCcchhhhhcccccccEEEEEeccCC
Q 044260 276 NERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 276 ~dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
.+|+ ..++|+||+++||++.+.
T Consensus 352 ~~rd----Gfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 352 MNRD----GFVMGEGAGVLLLEELEH 373 (540)
T ss_pred cCCC----CcccccceEEEEEeeHHH
Confidence 1223 468899999999997543
No 86
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=1.4e-08 Score=107.68 Aligned_cols=90 Identities=10% Similarity=0.026 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNP--TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~--~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++.+ ||+++..++..|...+++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~s 107 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVAS 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhC
Confidence 3466999999999999999999999987644322 466788899999997 588999995 899999999999999999
Q ss_pred CCCCeEEEEEeccC
Q 044260 255 HPNSYALVISMENI 268 (511)
Q Consensus 255 ~~~~~aLVVs~E~~ 268 (511)
|..++||||+.|.+
T Consensus 108 G~ad~vLVvg~e~~ 121 (392)
T PRK06065 108 GLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCEEEEEEeecc
Confidence 99999999999974
No 87
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.82 E-value=2e-07 Score=99.06 Aligned_cols=119 Identities=12% Similarity=0.080 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC-C-----------------CCC--------C-cHHHHHHHHcCC
Q 044260 176 AECVMFGALDELFAKTSLKPKDIG----ILIVNCSL-F-----------------NPT--------P-SLSAMVINHYKL 224 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID----~LIv~~s~-~-----------------~~~--------P-s~a~~I~~~LGl 224 (511)
...++..|++++|+++|+++++++ .|+++++. . ... + ..+..|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467889999999999999875433 24444321 1 001 1 246789999999
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC----------CcC----------C--CCcchhh
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN----------WYF----------G--NERSMLV 282 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~----------~--~dr~~lv 282 (511)
+ -+++-++. +|++++.||..|.++|+.+. +.+||.++|..... ... + .+|+
T Consensus 151 ~--Gp~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~--- 223 (399)
T cd00832 151 R--GPSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA--- 223 (399)
T ss_pred C--CCcccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC---
Confidence 7 47788885 99999999999999999999 99999999873210 000 0 0122
Q ss_pred hhcccccccEEEEEeccCCc
Q 044260 283 SNCLFRMGGAAILLSNKRSD 302 (511)
Q Consensus 283 ~~~lFgDGAaA~lLs~~~~~ 302 (511)
..+.|+||++++|++.+..
T Consensus 224 -G~~~gEGa~~lvLe~~~~A 242 (399)
T cd00832 224 -GYVPGEGGAILVLEDAAAA 242 (399)
T ss_pred -CEeeeceEEEEEEeeHHHH
Confidence 4688999999999976543
No 88
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.78 E-value=6.7e-07 Score=94.84 Aligned_cols=81 Identities=20% Similarity=0.186 Sum_probs=64.9
Q ss_pred CcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC---------------cCC-
Q 044260 212 PSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNW---------------YFG- 275 (511)
Q Consensus 212 Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~---------------~~~- 275 (511)
++.+..|+..||++. .++.++. +|++++.||..|.++|++|..+.|||+++|..+... .+.
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~~-acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIST-ACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--CcccccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 357888999999973 7888994 999999999999999999999999999999654310 001
Q ss_pred CCcchhhhhcccccccEEEEEecc
Q 044260 276 NERSMLVSNCLFRMGGAAILLSNK 299 (511)
Q Consensus 276 ~dr~~lv~~~lFgDGAaA~lLs~~ 299 (511)
.+++ ..++|||++++||++.
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~ 233 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLERE 233 (392)
T ss_pred CCCC----ccceeceEEEEEEEEc
Confidence 1222 3689999999999987
No 89
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.78 E-value=8.8e-07 Score=95.30 Aligned_cols=121 Identities=12% Similarity=0.038 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCC-----CcCEEEEeecCCC------------------C--------CC-cHHHHHHHHcC
Q 044260 176 AECVMFGALDELFAKTSLKPK-----DIGILIVNCSLFN------------------P--------TP-SLSAMVINHYK 223 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~-----dID~LIv~~s~~~------------------~--------~P-s~a~~I~~~LG 223 (511)
...++..|+.+||+++|+++. +...++++++... . .+ ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457889999999999998542 3556666653110 0 12 24568999999
Q ss_pred CCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC-----------C-----------cCCCCcchh
Q 044260 224 LRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN-----------W-----------YFGNERSML 281 (511)
Q Consensus 224 l~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----------~-----------~~~~dr~~l 281 (511)
++ -.++-+++ +|++++.||..|.++|++|..+.+||.++|..... + ...-|+..
T Consensus 173 l~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 87 57888895 99999999999999999999999999998863210 0 00001110
Q ss_pred hhhcccccccEEEEEeccCC
Q 044260 282 VSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 282 v~~~lFgDGAaA~lLs~~~~ 301 (511)
..++.||||+|+||++.+.
T Consensus 249 -~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred -CCeeeecCEEEEEEeeHHH
Confidence 1468899999999997654
No 90
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.78 E-value=3e-08 Score=105.04 Aligned_cols=93 Identities=15% Similarity=0.155 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNP-TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|++++|+++|+.++|||.+|++++ ++.. .+.++.+++..+|++.++++++++ .+|++|+.|+..|.+.+++
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~s 106 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIML 106 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 456699999999999988899999999864 3333 367777899999998569999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.+||++.|.+|.
T Consensus 107 G~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 107 GHSEAVIAGGAESMSL 122 (391)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999999875
No 91
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.76 E-value=5e-07 Score=96.70 Aligned_cols=119 Identities=14% Similarity=0.105 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCcCE----EEEeecCCC------------------C--------CC-cHHHHHHHHcC
Q 044260 176 AECVMFGALDELFAKTSLK-PKDIGI----LIVNCSLFN------------------P--------TP-SLSAMVINHYK 223 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~-p~dID~----LIv~~s~~~------------------~--------~P-s~a~~I~~~LG 223 (511)
..+++..|+++||+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 3567799999999999998 666653 333322110 0 11 24567888899
Q ss_pred CCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------c------C--------CCCcc
Q 044260 224 LRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNW----------Y------F--------GNERS 279 (511)
Q Consensus 224 l~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~------~--------~~dr~ 279 (511)
++ -+++.++. +|++++.||..|.++|++|..+.+||.++|.....+ + . ..+++
T Consensus 157 l~--Gp~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~ 233 (421)
T PTZ00050 157 LK--GPSGSAVT-ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRA 233 (421)
T ss_pred CC--Cccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCC
Confidence 97 47788884 999999999999999999999999999999732100 0 0 01122
Q ss_pred hhhhhcccccccEEEEEeccCC
Q 044260 280 MLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 280 ~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
..+.||||+|+||++.+.
T Consensus 234 ----G~~~gEGAaalvLe~~~~ 251 (421)
T PTZ00050 234 ----GFVMGEGAGILVLEELEH 251 (421)
T ss_pred ----CEeeccceEEEEEeeHHH
Confidence 467899999999987654
No 92
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.75 E-value=7.5e-07 Score=94.92 Aligned_cols=185 Identities=12% Similarity=0.191 Sum_probs=112.1
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEEeecCccc-CCCCCccHHHHHHHH
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGESTYLPEAVL-RVPPNPCMAEARKEA 176 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~~~~~~~~-~~~~~~~ma~~~~ea 176 (511)
++|.|.++|+.-|- -.+.+++.+.+.. |. +.+- .+ ++..+...+.....+.. ...............
T Consensus 2 ~rVvITG~G~vsp~---G~~~~~~w~~l~~-G~sgi~~~-----~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSI---GNNQQEVLASLRE-GRSGITFS-----PE-FAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCC---CCCHHHHHHHHHc-CCCceeEC-----Cc-ccccCCCCceEEEcCCChhhcCCHHHhhcCCHH
Confidence 57999999999987 4778888876532 11 1100 00 11223333322111000 000000000011124
Q ss_pred HHHHHHHHHHHHHhCCCCCCC-----cCEEEEeecCC------------------C--------CCC-cHHHHHHHHcCC
Q 044260 177 ECVMFGALDELFAKTSLKPKD-----IGILIVNCSLF------------------N--------PTP-SLSAMVINHYKL 224 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~d-----ID~LIv~~s~~------------------~--------~~P-s~a~~I~~~LGl 224 (511)
..++..|++++|+++|+++++ +++++-.+... . ..| ..+..|...||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 567889999999999987543 44444222110 0 111 257789999999
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCc---------------------CC--CCcchh
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNWY---------------------FG--NERSML 281 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~---------------------~~--~dr~~l 281 (511)
+. +++.++. +|++++.||..|.++|+.|..+.+||.++|..+...+ .+ .+|+
T Consensus 152 ~G--p~~tvs~-aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~-- 226 (406)
T PRK07967 152 KG--VNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRD-- 226 (406)
T ss_pred CC--Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCC--
Confidence 84 7778894 9999999999999999999999999999987543110 00 1122
Q ss_pred hhhcccccccEEEEEeccCC
Q 044260 282 VSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 282 v~~~lFgDGAaA~lLs~~~~ 301 (511)
..+.|+||+++||++.+.
T Consensus 227 --G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 227 --GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred --ceeeeceEEEEEEeeHHH
Confidence 357899999999987543
No 93
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.74 E-value=5.3e-08 Score=103.40 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 176 AECVMFGALDELFAKT-SLKPKDIGILIVNCSL--FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~a-gi~p~dID~LIv~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
+++|+..|++++|+|. |++|++||.+|++|.. ....+..+..+....|++.+++++.++ +.|++|+.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 4567799999999974 9999999999999753 222377888999999999789999999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCC
Q 044260 253 QVHPNSYALVISMENITL 270 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~ 270 (511)
++|..+.+|+++.|.+|+
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 94
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.72 E-value=4.6e-08 Score=104.88 Aligned_cols=93 Identities=10% Similarity=0.176 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCC-CCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFN-PTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
++|+.+|++++|+++|++|++||.+|+++.... ..+.++.+++..+|++..++++.++ ++|++++.|+..|.+.+++|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~sG 108 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMAG 108 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHCC
Confidence 456799999999999999999999999975322 2355677799999998669999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+.+||++.|.+|.
T Consensus 109 ~~dvvLvgG~Esms~ 123 (428)
T PRK08963 109 TIDIGIAGGADSSSV 123 (428)
T ss_pred CCCEEEEecccccCC
Confidence 999999999999885
No 95
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.72 E-value=7.7e-07 Score=97.14 Aligned_cols=91 Identities=13% Similarity=-0.004 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHhCCCC--CCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLK--PKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~--p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|+++||+++|++ ++|||.++++.............+++++|+.+ ....... .||+++..++..|...|++
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ias 105 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIAA 105 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHHC
Confidence 457799999999999999 99999998764321122234578999999974 4555555 5898999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 044260 255 HPNSYALVISMENIT 269 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s 269 (511)
|..+.|||+++|.++
T Consensus 106 G~advVLv~G~E~~~ 120 (498)
T PRK08257 106 GEADVALVAGAEAQS 120 (498)
T ss_pred CCCCEEEEeeeeecc
Confidence 999999999999753
No 96
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.71 E-value=6.7e-08 Score=104.06 Aligned_cols=93 Identities=15% Similarity=0.209 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCc-HHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPS-LSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps-~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|++++|+++|++++|||.+|+++. .....+. .+.++...+|++..+++++++ .+|++|+.++..|.+.|++
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~s 150 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIKA 150 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHHc
Confidence 456699999999999999999999998865 4443344 344666778998668999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.|||++.|.+|.
T Consensus 151 G~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 151 GFYDIGIGAGVESMTT 166 (452)
T ss_pred CCCCeEEEEeEEecCC
Confidence 9999999999999875
No 97
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.69 E-value=8.1e-08 Score=102.28 Aligned_cols=92 Identities=14% Similarity=0.197 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 177 ECVMFGALDELFAKT-SLKPKDIGILIVNCS-LF-NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~a-gi~p~dID~LIv~~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
.+|+.+|+++||+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.++ .+|++|..++..|.+.++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I~ 105 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAIK 105 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHHH
Confidence 456799999999996 999999999998753 22 22356678899999996 68999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+.|||++.|.+|.
T Consensus 106 sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 106 AGEGDVFISAGVETVSR 122 (406)
T ss_pred CCCCCEEEEeeEEeccc
Confidence 99999999999998765
No 98
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.69 E-value=6.1e-08 Score=102.69 Aligned_cols=92 Identities=17% Similarity=0.193 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CC-C-CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSL-FN-P-TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~-~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
.+|+.+|++++|+++|++++|||.+|++++. .. . .+..+..+...+|++ ++++++++ ++|++++.||.+|.++++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I~ 100 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAIE 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHHH
Confidence 4567999999999999999999999988642 11 1 111122334456776 68899999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+++||++.|.+|.
T Consensus 101 sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 101 AGRARIVLVVGAEKMTA 117 (389)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998753
No 99
>PRK06158 thiolase; Provisional
Probab=98.68 E-value=5.3e-08 Score=103.01 Aligned_cols=86 Identities=16% Similarity=0.037 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHP 256 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~ 256 (511)
.+|+.+|+++||+++|++++|||.+|+++. +...|+ ..+++++|++ ..+.+++. .||+++..++..|..++++|.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcCC
Confidence 356699999999999999999999998763 233443 5799999998 57888998 599999999999999999999
Q ss_pred CCeEEEE-Eecc
Q 044260 257 NSYALVI-SMEN 267 (511)
Q Consensus 257 ~~~aLVV-s~E~ 267 (511)
.++|||+ +.|.
T Consensus 104 ~d~vLV~~g~~~ 115 (384)
T PRK06158 104 CDVALICYGSNQ 115 (384)
T ss_pred CCEEEEeecccc
Confidence 9999998 4443
No 100
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.68 E-value=3.2e-06 Score=90.46 Aligned_cols=186 Identities=13% Similarity=0.037 Sum_probs=113.0
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccCC--CChhhHHHHHHHHHHhCCCcEE--eecCcccCCCCCccHHHHH--
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTGT--FSQENLDFQRKILERSGLGEST--YLPEAVLRVPPNPCMAEAR-- 173 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~~--~~~~~~~f~~ri~~~sGi~~r~--~~~~~~~~~~~~~~ma~~~-- 173 (511)
++|.|+|+|+..|- -.+.+++.+.+.. |. +.+-. ++ -.++.++..+. ..+.+ .. +..+..+++
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~-~~---~~~~~~~~~~~~g~i~~~-~d--~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLD-DP---FVEEFDLPVRIGGHLLEE-FD--HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCC-hh---hhhccCCCcceEEEeccC-cc--ccCCHHHHhhc
Confidence 57999999999987 5688888887642 11 11100 00 01112222221 11111 10 001111222
Q ss_pred HHHHHHHHHHHHHHHHhCCC---CCCCcCEEEEeecCCC-------------------------CCC-cHHHHHHHHcCC
Q 044260 174 KEAECVMFGALDELFAKTSL---KPKDIGILIVNCSLFN-------------------------PTP-SLSAMVINHYKL 224 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi---~p~dID~LIv~~s~~~-------------------------~~P-s~a~~I~~~LGl 224 (511)
.-...++..|++++|+++|+ +++++++++-.+.... ..| ..+..|...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 23456889999999999996 5566765543321100 012 245667888888
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC-----------cC-----C------CCcchhh
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNW-----------YF-----G------NERSMLV 282 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~-----------~~-----~------~dr~~lv 282 (511)
+. .++.++. +|++++.||..|.++|+.|..+.++|.++|.....+ .. . -|+..
T Consensus 161 ~G--~~~ti~t-aCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 KA--GVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred CC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 74 5677784 999999999999999999999999999999742100 10 0 01110
Q ss_pred hhcccccccEEEEEeccCC
Q 044260 283 SNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 283 ~~~lFgDGAaA~lLs~~~~ 301 (511)
...++|+|++++||++.+.
T Consensus 236 ~G~v~gEGaa~vvLe~~~~ 254 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEH 254 (418)
T ss_pred CCEeeeceEEEEEEeeHHH
Confidence 2468999999999997654
No 101
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.67 E-value=1.1e-07 Score=100.73 Aligned_cols=94 Identities=12% Similarity=0.203 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
+.+|+.+|++++|+++|++|+|||.++++|.. ... ....+..+....|++.+++++.++ ++|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 35677999999999999999999999998753 222 234566777889998679999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 102
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.66 E-value=9.7e-08 Score=101.48 Aligned_cols=94 Identities=13% Similarity=0.166 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 176 AECVMFGALDELFAK-TSLKPKDIGILIVNCSLF--NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~-agi~p~dID~LIv~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
+++|+..|++++|++ +|++|++||.+|+++... ...+..+..+....|++.+++++.++ ++|++|..|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 346779999999996 699999999999987532 21356777799999998779999999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCC
Q 044260 253 QVHPNSYALVISMENITL 270 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~ 270 (511)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999986
No 103
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=7.5e-08 Score=102.00 Aligned_cols=94 Identities=16% Similarity=0.282 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
+++|+..|++++|+++|++|+|||.+|+++.. ....+..+.+++..+|++.+++++.++ .+|++|+.|+..|.+.+++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 45667999999999999999999999998753 222456677788999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999999885
No 104
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.3e-07 Score=100.52 Aligned_cols=94 Identities=14% Similarity=0.195 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCS-LF-NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
.++|+.+|++++|+++|++|+|||.+|+++. +. ...+..+.+++...|++.+++++.++ ++|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 3567799999999999999999999999865 22 22356677799999998779999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+.+||++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999885
No 105
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1.1e-07 Score=101.21 Aligned_cols=90 Identities=18% Similarity=0.141 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-----CcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHH
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPT-----PSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~-----Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~ 250 (511)
.+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. +++++++++ +|++++.+|..|..
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~~-~Casg~~al~~Aa~ 102 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHEA-ACASGSVATLAAMA 102 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeeccc-ccHHHHHHHHHHHH
Confidence 345699999999999999999999998854 43222 23233222 3443 467999994 99999999999999
Q ss_pred HHhcCCCCeEEEEEeccCCC
Q 044260 251 LLQVHPNSYALVISMENITL 270 (511)
Q Consensus 251 lL~~~~~~~aLVVs~E~~s~ 270 (511)
++++|..++|||+++|..|.
T Consensus 103 ~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 103 DLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHcCCCCEEEEEEEEecCC
Confidence 99999999999999998653
No 106
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.63 E-value=1.4e-07 Score=100.12 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 176 AECVMFGALDELFAK-TSLKPKDIGILIVNCSL--FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~-agi~p~dID~LIv~~s~--~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
+++|+..|++++|++ +|++|+|||.+|+++.. ....+..+..+...+|++.+++++.++ ++|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 356779999999996 69999999999998643 222366777899999998779999999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCC
Q 044260 253 QVHPNSYALVISMENITL 270 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~ 270 (511)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999985
No 107
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.62 E-value=1.7e-07 Score=99.34 Aligned_cols=93 Identities=14% Similarity=0.230 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++|+|||.+|+++.. ....+..+..++..+|++.+++++.++ .+|++++.++..|.+.+++|
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~sG 105 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIMLG 105 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhcC
Confidence 4567999999999999999999999988642 112334567799999998568899999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+.+||++.|.+|.
T Consensus 106 ~~d~vla~G~e~ms~ 120 (388)
T PRK06366 106 ERDLVIAGGMENMSN 120 (388)
T ss_pred CCCEEEEEeeEcccc
Confidence 999999988898774
No 108
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.61 E-value=1.1e-07 Score=94.01 Aligned_cols=120 Identities=21% Similarity=0.346 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC------cCEEEEeecCCC-----------------C------CC-cHHHHHHHHcCC
Q 044260 175 EAECVMFGALDELFAKTSLKPKD------IGILIVNCSLFN-----------------P------TP-SLSAMVINHYKL 224 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~d------ID~LIv~~s~~~-----------------~------~P-s~a~~I~~~LGl 224 (511)
....++..|+.+||+++|+++++ +++++-++..++ + .| ..+..|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 46788999999999999999853 444443322210 1 23 257789999999
Q ss_pred CCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEec-cCCCC---------CcCCC------Ccchhhhhcccc
Q 044260 225 RGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISME-NITLN---------WYFGN------ERSMLVSNCLFR 288 (511)
Q Consensus 225 ~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E-~~s~~---------~~~~~------dr~~lv~~~lFg 288 (511)
+. +++-+++ +|++++.||..|.++|++|..+.+||.++| .++.. ....+ |+.. ...++|
T Consensus 166 ~G--~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 RG--PSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp -S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred CC--ccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 84 6778885 999999999999999999999999999999 44431 11111 1111 347999
Q ss_pred cccEEEEEecc
Q 044260 289 MGGAAILLSNK 299 (511)
Q Consensus 289 DGAaA~lLs~~ 299 (511)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999864
No 109
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.59 E-value=1.6e-07 Score=100.66 Aligned_cols=94 Identities=13% Similarity=0.187 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
..+|+.+|++++|+++|++|++||.+|+++.. ....+.++..+.-..|++..++++.++ ++|++|+.|+.+|.+.+++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 34667999999999999999999999998753 222355666777778998779999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 110
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.57 E-value=3.1e-07 Score=97.35 Aligned_cols=94 Identities=14% Similarity=0.222 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
.++|+..|++++|+++|++|+|||.+|+++.. ... .+..+..+.-.-|++.+++++.++ .+|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 35677999999999999999999999998753 211 245555555555887689999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 044260 254 VHPNSYALVISMENITL 270 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s~ 270 (511)
+|..+.+||++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999985
No 111
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.54 E-value=3.8e-07 Score=97.00 Aligned_cols=92 Identities=20% Similarity=0.167 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLF-NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++++|||.+++++... +........+.+.+|++ ..+++.+. ++|++++.++..|...+++|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~sG 105 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVASG 105 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHCC
Confidence 45679999999999999999999999876422 21122235688899998 58899999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+.+||++.|.+|.
T Consensus 106 ~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 106 AYDIALALGVEKLKD 120 (398)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999998753
No 112
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.54 E-value=3.1e-07 Score=97.28 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 176 AECVMFGALDELFAK-TSLKPKDIGILIVNCSLF-NP-TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~-agi~p~dID~LIv~~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
+++|+..+++++|++ +|++|+|||.+|+++... .. .+..+..+....|++.+++++.++ ++|++|+.|+..|...+
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 356679999999997 699999999999997542 22 244566788899998679999999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCC
Q 044260 253 QVHPNSYALVISMENITL 270 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~ 270 (511)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999875
No 113
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.51 E-value=3.6e-06 Score=87.68 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCcCEEEEeecCC-----------------CCCC---------cHHHHHHHHcCCCCC
Q 044260 176 AECVMFGALDELFAKTSL--KPKDIGILIVNCSLF-----------------NPTP---------SLSAMVINHYKLRGN 227 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi--~p~dID~LIv~~s~~-----------------~~~P---------s~a~~I~~~LGl~~~ 227 (511)
..+++..|++++++++|+ +++++++++-.+... ...| ..+..|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 345668999999999996 677887766443111 0011 35678899999984
Q ss_pred ceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCC----------cC------------C--CCcchhhh
Q 044260 228 IVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNW----------YF------------G--NERSMLVS 283 (511)
Q Consensus 228 ~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~------------~--~dr~~lv~ 283 (511)
+++-++. +|++++.||..|.++|+.|..+.+||.++|.....+ .. + .+|+
T Consensus 83 -p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~---- 156 (342)
T PRK14691 83 -PIGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD---- 156 (342)
T ss_pred -Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----
Confidence 7788885 999999999999999999999999999998732100 00 0 1222
Q ss_pred hcccccccEEEEEeccCC
Q 044260 284 NCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 284 ~~lFgDGAaA~lLs~~~~ 301 (511)
..++||||+++||++.+.
T Consensus 157 G~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEH 174 (342)
T ss_pred CccccceEEEEEEeeHHH
Confidence 468899999999987654
No 114
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.50 E-value=6.1e-07 Score=96.42 Aligned_cols=93 Identities=19% Similarity=0.240 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCC--cCEEEEeecC---CCCCCcHHHHHHHHcCCC------CCceEEEecCCCchHHHHHH
Q 044260 177 ECVMFGALDELFAKTSLKPKD--IGILIVNCSL---FNPTPSLSAMVINHYKLR------GNIVSYNLGGMGCSAGLISI 245 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~d--ID~LIv~~s~---~~~~Ps~a~~I~~~LGl~------~~~~~~dl~g~gCsggl~al 245 (511)
++|+.+|++++|+++|++++| ||.+|+++.. +...+..+..+...+|++ ..++++.++ .+|++|+.|+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~Ai 127 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLAV 127 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHHH
Confidence 456699999999999999999 9999988642 112355566777665554 368899999 5999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCCC
Q 044260 246 DLAKDLLQVHPNSYALVISMENITL 270 (511)
Q Consensus 246 ~lA~~lL~~~~~~~aLVVs~E~~s~ 270 (511)
..|.+.+++|..+.|||++.|.+|.
T Consensus 128 ~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 128 QSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999998775
No 115
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.49 E-value=5.2e-07 Score=96.82 Aligned_cols=92 Identities=15% Similarity=0.065 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHHH-HHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLF-NPTPSLSA-MVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~-~~~Ps~a~-~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
++|+.+|+++||+++|++++|||.+++++... ...+..+. .++..+|++ .++++.+. .+|+++..+|..|...|++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~s 115 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIAS 115 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHHc
Confidence 46779999999999999999999988776332 21223333 467999998 48999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.|||+++|..|.
T Consensus 116 G~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 116 GRMDCVAVYGFETMSH 131 (430)
T ss_pred CCCCEEEEEEeeeccc
Confidence 9999999999997653
No 116
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.48 E-value=7.9e-06 Score=86.89 Aligned_cols=183 Identities=14% Similarity=0.074 Sum_probs=111.8
Q ss_pred CCCcEEEEEeEEcCCCCceecHHHHHHHhcc--cC-CCChhhHHHHHHHHHHhCC-CcEEeecCcccCCCCCccHHHHHH
Q 044260 99 PQPVYLVNFACYKPEDARKCTRQIFMERSGL--TG-TFSQENLDFQRKILERSGL-GESTYLPEAVLRVPPNPCMAEARK 174 (511)
Q Consensus 99 ~~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~--~~-~~~~~~~~f~~ri~~~sGi-~~r~~~~~~~~~~~~~~~ma~~~~ 174 (511)
+++|.|.++|+-.|- =.+.+++.+.+.. .+ .++.. +|- . ...+. ++- ....+ .+..... ...+
T Consensus 5 ~~rVvITGiG~vsp~---G~~~e~~w~aL~~G~sg~~~~~~--~~~--~-~~~~~~~~~---~~~~~-~~~~~~~-r~~~ 71 (398)
T PRK06519 5 PNDVVITGIGLVSSL---GEGLDAHWNALSAGRPQPNVDTE--TFA--P-YPVHPLPEI---DWSQQ-IPKRGDQ-RQME 71 (398)
T ss_pred CCCEEEEcceEECCC---CCCHHHHHHHHHcCCCCCCCCcc--ccc--C-cCccccccc---Chhhc-CCchhhh-hccC
Confidence 568999999999987 5788888886632 11 11110 000 0 00000 000 00000 0000000 0112
Q ss_pred HHHHHHHHHHHHHHHhCCCCC-----CCcCEEEEeecCC--C-----------------------------------CCC
Q 044260 175 EAECVMFGALDELFAKTSLKP-----KDIGILIVNCSLF--N-----------------------------------PTP 212 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p-----~dID~LIv~~s~~--~-----------------------------------~~P 212 (511)
....++..|++++|+++|+++ +++++++-.+... . ..|
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 345678999999999999854 3455555433211 0 012
Q ss_pred -cHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-CC---------CCcC------C
Q 044260 213 -SLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENI-TL---------NWYF------G 275 (511)
Q Consensus 213 -s~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~-s~---------~~~~------~ 275 (511)
..+..|...+|++. +++-+++ +|++++.||..|.++|+.|..+.+||.++|.. +. .... .
T Consensus 152 n~~a~~is~~~gl~G--p~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVTG--SSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCCC--ccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 24667899999984 7888995 99999999999999999999999999999862 21 0110 0
Q ss_pred C-----CcchhhhhcccccccEEEEEeccCC
Q 044260 276 N-----ERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 276 ~-----dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
. +|+ ..+.|+||+++||++.+.
T Consensus 229 ~d~~~~~r~----G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 229 WSRGGEDGG----GFILGSGGAFLVLESREH 255 (398)
T ss_pred hccCccCCC----CeeeeceEEEEEEeeHHH
Confidence 1 133 367899999999998654
No 117
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.46 E-value=4.8e-07 Score=95.72 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 176 AECVMFGALDELFAK-TSLKPKDIGILIVNCSLF-NP-TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~-agi~p~dID~LIv~~s~~-~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
+.+|+.+|++++|++ +|++|++||.+++++... .. .+..+..+....|++..++++.++ .+|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 356779999999997 599999999999997532 21 234666666688998779999999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCC
Q 044260 253 QVHPNSYALVISMENITL 270 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~ 270 (511)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999875
No 118
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.41 E-value=1.3e-06 Score=93.68 Aligned_cols=93 Identities=16% Similarity=0.224 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLF-NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~-~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+|+.+|++++|+++|++++|||.+|+++... ...+..+..+.-..|++...+++.++ ++|++|+.++..|.+.|++|
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~sG 110 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIALG 110 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHCC
Confidence 46679999999999999999999999987432 11244566666666676568999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+.+||++.|.+|.
T Consensus 111 ~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 111 QIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCEEEEeeEEccCC
Confidence 999999999999885
No 119
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.39 E-value=1.2e-06 Score=92.53 Aligned_cols=93 Identities=13% Similarity=0.211 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~-~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
.+|+.+|++++|+++|++++|||.+|+++.. ... .+..+..+.-..|++..+.++.++ .+|++++.++..|.+.|++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~s 105 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVMS 105 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHHC
Confidence 4567999999999999999999999987642 111 233344444457776568899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.|||++.|.+|.
T Consensus 106 G~~d~vLv~G~e~ms~ 121 (382)
T PRK07801 106 GTQDLVVAGGVQNMSQ 121 (382)
T ss_pred CCCCEEEEcchhhhcC
Confidence 9999999999997654
No 120
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.37 E-value=1.9e-05 Score=99.88 Aligned_cols=217 Identities=15% Similarity=0.123 Sum_probs=126.6
Q ss_pred HHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCC-CC---------cC--C----CC
Q 044260 214 LSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITL-NW---------YF--G----NE 277 (511)
Q Consensus 214 ~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~-~~---------~~--~----~d 277 (511)
.+.+|.++||+++ +++-+. .+|++++.||++|.+.|++|..+.+||.+++.... .. +. + -|
T Consensus 185 ~A~RIS~~f~L~G--ps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGG--MNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 4788999999984 788899 49999999999999999999999999998876321 10 10 1 01
Q ss_pred cchhhhhcccccccEEEEEeccCCccccccceeeeEEee-EecCCCCcccceeeccCCCCCcccccchhhHHHHhhhhhh
Q 044260 278 RSMLVSNCLFRMGGAAILLSNKRSDRWRSKYRLVHTVRT-HKGADDKCFSCVTQQEDPTGRIGVSLSKDLMAVAGDALKT 356 (511)
Q Consensus 278 r~~lv~~~lFgDGAaA~lLs~~~~~~~~~~~~L~~~v~t-~~~~d~~~~~~v~~~~d~~g~~g~~ls~d~~~~~g~~l~~ 356 (511)
.+. ...++|+|+++++|.+-....++ +=++...++. ...+|++. ..++. |...+.
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~-~~ita----------------P~~~gq---- 317 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKF-KSIYA----------------PRPEGQ---- 317 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCC-CCCcC----------------CCHHHH----
Confidence 110 14688999999999875543211 1122222222 22233321 11111 100010
Q ss_pred hhhccCCCcccchhhhHHHHHHHHHHHHHhhcccccccccccccEEEecCCchHHHHH-----HHHHcCCCcc---cccc
Q 044260 357 NITTLGPLVLPMSEQLLFFATLVARKVFKLKIKPYIPDFKLAFEHFCIHAGGRAVLDE-----LEKNLQLSDR---HMEP 428 (511)
Q Consensus 357 ni~~lgp~vlP~se~~~~~~~~~~r~v~~~~~~~~~~~~~~did~~~~H~~g~~vl~~-----i~~~Lgl~~e---~~~~ 428 (511)
.++++.+++. .+...++|+++..|-.|..+-|. +.+.++-... .+ +
T Consensus 318 ------------------------~~~i~~Al~~-Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~-~ 371 (2582)
T TIGR02813 318 ------------------------AKALKRAYDD-AGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHI-A 371 (2582)
T ss_pred ------------------------HHHHHHHHHH-cCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCc-e
Confidence 1122222221 12224799999999987766444 4555653221 11 1
Q ss_pred hhhccccccccccchHHHHHHHH---HHcCCCC--------------------------------CC--CEEEEEeeChH
Q 044260 429 SRMTLYRFGNTSSSSLWYELAYS---EAKGRIK--------------------------------RG--DRTWQIAFGSG 471 (511)
Q Consensus 429 S~~~l~r~GNtsSasi~~~La~~---~~~g~l~--------------------------------~G--d~VlliafGsG 471 (511)
--.+=..+||+-+++=...|... ++.|.+. .| .++..-+||-|
T Consensus 372 vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfG 451 (2582)
T TIGR02813 372 LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFG 451 (2582)
T ss_pred eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCC
Confidence 01222468999998887777543 2232211 11 35777889988
Q ss_pred HHHhhhheEEec
Q 044260 472 FKCNSAVWKALR 483 (511)
Q Consensus 472 ~~~~s~v~r~~~ 483 (511)
-+..+++++--.
T Consensus 452 GtN~hvvlee~~ 463 (2582)
T TIGR02813 452 GTNFHMVLEEYS 463 (2582)
T ss_pred CeeEEEEEeecC
Confidence 888888888653
No 121
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.29 E-value=2.8e-05 Score=78.18 Aligned_cols=116 Identities=23% Similarity=0.267 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPN 257 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~ 257 (511)
.|..+|++.+|+|++++++|||.++-+--..+.++ ++..++.|++ +-+.+.| +||....+|.+|.-++..+-.
T Consensus 53 ~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg~a 125 (329)
T PF07451_consen 53 KMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGGFA 125 (329)
T ss_dssp HHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCCCc
Confidence 46789999999999999999999986654444443 4778888875 5899997 999999999999999999999
Q ss_pred CeEEEEEeccCCC---CCcC----CCCcchhhhhcccccccEEEEEeccCCc
Q 044260 258 SYALVISMENITL---NWYF----GNERSMLVSNCLFRMGGAAILLSNKRSD 302 (511)
Q Consensus 258 ~~aLVVs~E~~s~---~~~~----~~dr~~lv~~~lFgDGAaA~lLs~~~~~ 302 (511)
+++|+.++-.... .|.. +..|.. +...---||+|+||++....
T Consensus 126 ~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 126 DYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred ceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 9999988766542 2222 223321 23344578999999977653
No 122
>PRK07937 lipid-transfer protein; Provisional
Probab=98.20 E-value=0.00012 Score=76.71 Aligned_cols=88 Identities=16% Similarity=0.072 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHP 256 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~-~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~ 256 (511)
+|+.+|+++||+++|++++|||.++.+++. ..........+...+|+.+......+.+ +|..++..|...+++|.
T Consensus 26 el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~----~g~~a~~~A~~aI~sG~ 101 (352)
T PRK07937 26 EMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHVEM----DAAWALYEAWVKLLTGE 101 (352)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEecC----cHHHHHHHHHHHHhcCC
Confidence 466999999999999999999988543331 1111111234567788753445555553 57779999999999999
Q ss_pred CCeEEEEEeccCC
Q 044260 257 NSYALVISMENIT 269 (511)
Q Consensus 257 ~~~aLVVs~E~~s 269 (511)
.++|||++.|..+
T Consensus 102 ~d~VLv~g~~k~~ 114 (352)
T PRK07937 102 VDTALVYGFGKSS 114 (352)
T ss_pred CCEEEEEEecccC
Confidence 9999999999654
No 123
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.11 E-value=1.1e-05 Score=85.53 Aligned_cols=87 Identities=14% Similarity=0.020 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHP 256 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~ 256 (511)
.+|+.+|+++||+++||+++|||.++.++.. .+.....+++.+|++ ..+..++. .||+++..++..|...+++|.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcCC
Confidence 3567999999999999999999998753211 111124589999997 47888888 599999999999999999999
Q ss_pred CCeEEEEEeccC
Q 044260 257 NSYALVISMENI 268 (511)
Q Consensus 257 ~~~aLVVs~E~~ 268 (511)
.+.||||+.|..
T Consensus 101 ~d~vLvvg~e~~ 112 (388)
T PRK08142 101 CSVALITLAGRP 112 (388)
T ss_pred CCEEEEEeeeec
Confidence 999999999964
No 124
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.11 E-value=0.00018 Score=76.62 Aligned_cols=122 Identities=16% Similarity=0.177 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCC-CCCcC--EEE-EeecC---C----C--------------------CCC-cHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLK-PKDIG--ILI-VNCSL---F----N--------------------PTP-SLSAMVINH 221 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~-p~dID--~LI-v~~s~---~----~--------------------~~P-s~a~~I~~~ 221 (511)
.-...++..|+++|++++|++ ..+.+ .-+ +.++. . . ..| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 345778999999999999997 34443 222 22221 1 0 122 245678889
Q ss_pred cCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CCC--------------C-------CcC-CCCc
Q 044260 222 YKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMEN-ITL--------------N-------WYF-GNER 278 (511)
Q Consensus 222 LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~-~s~--------------~-------~~~-~~dr 278 (511)
+|++ -..+.+++ +|+++..||..|.++|+.|..+.+++.++|. ++. . +.+ ..+|
T Consensus 149 ~g~~--G~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~R 225 (412)
T COG0304 149 FGLK--GPNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225 (412)
T ss_pred hCCC--CCcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCC
Confidence 9997 47888995 9999999999999999999999999999977 221 1 001 1234
Q ss_pred chhhhhcccccccEEEEEeccCCc
Q 044260 279 SMLVSNCLFRMGGAAILLSNKRSD 302 (511)
Q Consensus 279 ~~lv~~~lFgDGAaA~lLs~~~~~ 302 (511)
+ ..++|.||+++||+..+..
T Consensus 226 d----Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 226 D----GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred C----CEEEecceeEEEecChhhH
Confidence 4 3689999999999987653
No 125
>PRK07855 lipid-transfer protein; Provisional
Probab=97.95 E-value=3.6e-05 Score=81.58 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPN 257 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~ 257 (511)
+|+.+|+++||+++||+++|||.+++++.. ..+. ..+++.+|+++-....++. .||+++..++..|...+++|..
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG~~ 100 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATGVA 100 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCCCC
Confidence 466999999999999999999999874322 1222 4588999997424556888 4999999999999999999999
Q ss_pred CeEEEEEe
Q 044260 258 SYALVISM 265 (511)
Q Consensus 258 ~~aLVVs~ 265 (511)
+.|||+++
T Consensus 101 d~vLv~g~ 108 (386)
T PRK07855 101 DVVVCYRA 108 (386)
T ss_pred CEEEEEee
Confidence 99999987
No 126
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.82 E-value=0.00025 Score=71.23 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeec--CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCS--LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s--~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
+|...+.+..+++++++|+.|+-+++++. +..- -+.+.+-+-.-|++..++.--++ --|++|+.|+.....-+++|
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~G 140 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRAG 140 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhcC
Confidence 35578899999999999999999999864 3322 23344455566888767666667 69999999999999999999
Q ss_pred CCCeEEEEEeccCCCCC
Q 044260 256 PNSYALVISMENITLNW 272 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~~~ 272 (511)
.+.-.|-.+.|.+|.++
T Consensus 141 ~ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 141 FYDIGLAAGVESMTTNY 157 (435)
T ss_pred ceeeecccchhhhcccC
Confidence 99999999999998753
No 127
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.74 E-value=0.00017 Score=76.41 Aligned_cols=88 Identities=13% Similarity=0.124 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHhCC-CCC-CCcCEEEEeecCCC-CCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHh
Q 044260 177 ECVMFGALDELFAKTS-LKP-KDIGILIVNCSLFN-PTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~ag-i~p-~dID~LIv~~s~~~-~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
.+|+.+|+++||+++| +++ +|||.+++++.... ........++..+|+. ....+.+ |+++..++..|...++
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHIN 100 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHHH
Confidence 3567999999999999 998 79999987542111 1111223467889985 2344444 7789999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 044260 254 VHPNSYALVISMENIT 269 (511)
Q Consensus 254 ~~~~~~aLVVs~E~~s 269 (511)
+|..++|||++.|..+
T Consensus 101 sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 101 SGLANVVVVEAHSKPS 116 (385)
T ss_pred cCCCCEEEEEEEeecc
Confidence 9999999999998643
No 128
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.60 E-value=0.00023 Score=75.61 Aligned_cols=94 Identities=16% Similarity=0.287 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCcCEEEEeecCC--CCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 177 ECVMFGALDELFAKT--SLKPKDIGILIVNCSLF--NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~a--gi~p~dID~LIv~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
+++.....+..+++. ++++.+||.+|.+|... ...+..+..++...|++.+++.+.++ .+|++|+.++..|...+
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~I 106 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHHH
Confidence 334455555555443 68888899999987432 34667888999999999779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCCCC
Q 044260 253 QVHPNSYALVISMENITLN 271 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~~ 271 (511)
++|..+.+|+++.|.+|..
T Consensus 107 ~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 107 ASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HCCCCCEEEEEeeeeccCC
Confidence 9999999999999999874
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.48 E-value=0.0032 Score=74.88 Aligned_cols=193 Identities=15% Similarity=0.182 Sum_probs=117.4
Q ss_pred CCcEEEEEeEEcCCCCceecHHHHHHHhcccC----CCChhhHHHHHHHHH-HhCCCcEEeecCc------------ccC
Q 044260 100 QPVYLVNFACYKPEDARKCTRQIFMERSGLTG----TFSQENLDFQRKILE-RSGLGESTYLPEA------------VLR 162 (511)
Q Consensus 100 ~~v~I~~~~~y~P~~~~~vt~ee~~~~~~~~~----~~~~~~~~f~~ri~~-~sGi~~r~~~~~~------------~~~ 162 (511)
.+|=|+|++|.+|. --+.++|.+.+..-. .++++..+. ++... .-+...++|...+ .+.
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~rwd~-~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFg 79 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADRWDV-DAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFG 79 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhhhhH-hhccCCccccccccccccccccCCccccCHHHcC
Confidence 34899999999999 567788888765311 122221010 00000 0011222222111 111
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CCCCCC-------------------cHHHHH
Q 044260 163 VPPNPCMAEARKEAECVMFGALDELFAKTSLKPKDIG----ILIVNCS-LFNPTP-------------------SLSAMV 218 (511)
Q Consensus 163 ~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID----~LIv~~s-~~~~~P-------------------s~a~~I 218 (511)
++ +..+++.+-...|..+.+-++|+++|+.|+.+. .|+.+.+ .+|... -.+.+|
T Consensus 80 is--PrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Ri 157 (1061)
T COG3321 80 IS--PREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRI 157 (1061)
T ss_pred CC--HHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHH
Confidence 11 112222233355889999999999999999888 4555543 343322 157889
Q ss_pred HHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCC--CCc--------C--CCCcc--hhhhh
Q 044260 219 INHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITL--NWY--------F--GNERS--MLVSN 284 (511)
Q Consensus 219 ~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~--~~~--------~--~~dr~--~lv~~ 284 (511)
...|+++ -+++.|. .+||+.+.|+++|.+.|+.|....||+-+....-. .++ . +.-+. .--..
T Consensus 158 sy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG 234 (1061)
T COG3321 158 SYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADG 234 (1061)
T ss_pred HHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCC
Confidence 9999997 5888999 59999999999999999999988888777655421 111 1 11010 00124
Q ss_pred cccccccEEEEEeccCC
Q 044260 285 CLFRMGGAAILLSNKRS 301 (511)
Q Consensus 285 ~lFgDGAaA~lLs~~~~ 301 (511)
++.|.|+++++|.+-..
T Consensus 235 ~v~geG~g~vvLKrl~~ 251 (1061)
T COG3321 235 YVRGEGAGVVVLKRLSD 251 (1061)
T ss_pred EEEeeeEEEEEEEEhHH
Confidence 68899999999977543
No 130
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.44 E-value=0.00032 Score=70.76 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
|.+|+.-|++.+|+|++++|+|++-+|+++- .-+.--..+.+.+---||+-++.++-++ +.|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 4456699999999999999999999998853 3333334456676677888889999999 8999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 044260 255 HPNSYALVISMENITL 270 (511)
Q Consensus 255 ~~~~~aLVVs~E~~s~ 270 (511)
|..+.++..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 131
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.96 E-value=0.0017 Score=64.09 Aligned_cols=85 Identities=16% Similarity=0.268 Sum_probs=71.1
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSY 259 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~ 259 (511)
.+|+.++|++++++-++|+--+++-. .+... ..+-..++||. .++.||+++ .|+.|-.||-+|++++++|...+
T Consensus 34 ~ea~tkal~da~ikys~vqqa~vgyvfgdstc---gqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn~dc 108 (408)
T KOG1406|consen 34 KEAITKALQDAGIKYSEVQQAVVGYVFGDSTC---GQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGNSDC 108 (408)
T ss_pred HHHHHHHHHhcCCCHHHHHhhhheeeecCCcc---chHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCCcce
Confidence 99999999999999999987665422 22212 23455689998 699999996 99999999999999999999999
Q ss_pred EEEEEeccCCC
Q 044260 260 ALVISMENITL 270 (511)
Q Consensus 260 aLVVs~E~~s~ 270 (511)
||..+-|.+++
T Consensus 109 vlalgfekm~~ 119 (408)
T KOG1406|consen 109 VLALGFEKMER 119 (408)
T ss_pred EEeechhhhCC
Confidence 99999999876
No 132
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.55 E-value=0.0017 Score=65.88 Aligned_cols=59 Identities=25% Similarity=0.287 Sum_probs=42.7
Q ss_pred cccchhhccccccccccchHHHHHHHHH--HcCCCCCCCEEEEEeeChHHHHhhhheEEec
Q 044260 425 HMEPSRMTLYRFGNTSSSSLWYELAYSE--AKGRIKRGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
Q Consensus 425 ~~~~S~~~l~r~GNtsSasi~~~La~~~--~~g~l~~Gd~VlliafGsG~~~~s~v~r~~~ 483 (511)
+++||...-.+.||+.++|++..|+-++ ..+..-.|+||.|.++|||......-.+...
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~ 203 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQP 203 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-T
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeC
Confidence 5667776778899999999999999988 3444458999999999999765544544444
No 133
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.85 E-value=0.039 Score=56.94 Aligned_cols=119 Identities=16% Similarity=0.195 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC---CcC-----EEEEeecCC----------------------CCCC----cH-HHHHH
Q 044260 175 EAECVMFGALDELFAKTSLKPK---DIG-----ILIVNCSLF----------------------NPTP----SL-SAMVI 219 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~---dID-----~LIv~~s~~----------------------~~~P----s~-a~~I~ 219 (511)
....++..|+++||+++++.+. +.| .+| ++..+ +..| ++ +.+|.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~i-Gtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vs 171 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLI-GTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVS 171 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEe-ccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhh
Confidence 4677899999999999998765 222 222 22110 1123 22 57899
Q ss_pred HHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCC-----C-------c---CC--------C
Q 044260 220 NHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLN-----W-------Y---FG--------N 276 (511)
Q Consensus 220 ~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----~-------~---~~--------~ 276 (511)
-+||++ -+.+.++ .+|+.+..+|.-|.++|+.|..+..|--++|.+-.. | . ++ .
T Consensus 172 m~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~ 248 (440)
T KOG1394|consen 172 MKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDK 248 (440)
T ss_pred hhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCcc
Confidence 999998 4788899 599999999999999999998877777778863210 0 0 01 1
Q ss_pred CcchhhhhcccccccEEEEEeccCC
Q 044260 277 ERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 277 dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
+|+ ..+.|.|++.++|+.-+.
T Consensus 249 ~Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 249 KRD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CCC----ceeeccceeEEehHhHHH
Confidence 233 368899999999986544
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.59 E-value=0.023 Score=56.08 Aligned_cols=91 Identities=14% Similarity=0.070 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee----cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHH
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNC----SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~----s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL 252 (511)
.++..-|++.+|+.+++.++.+|.+|++. |.+- --++..|--+-|.+.+.+++.++ -=|.+|..++-.+.+-+
T Consensus 29 TdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDg--IYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~I 105 (396)
T KOG1391|consen 29 TDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDG--IYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQEI 105 (396)
T ss_pred hhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCc--eEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHHh
Confidence 44558999999999999999999999763 3331 11223344445556678899999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCCC
Q 044260 253 QVHPNSYALVISMENITL 270 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~ 270 (511)
..+..+-+|.-++|++|+
T Consensus 106 ~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 106 CVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hcCcceEEEecCcccccc
Confidence 999889999999999996
No 135
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.30 E-value=0.047 Score=45.31 Aligned_cols=76 Identities=14% Similarity=0.257 Sum_probs=47.2
Q ss_pred HHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCCchHHHHHHHHHHHHHhcCCCCeEEEEE
Q 044260 188 FAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSY---NLGGMGCSAGLISIDLAKDLLQVHPNSYALVIS 264 (511)
Q Consensus 188 L~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs 264 (511)
|+++|++++|||.+|.... .......+.+++|++++.... +..+++|+.-..+|..+.+-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999997642 234456689999998553333 334567777777776655532334678888888
Q ss_pred ecc
Q 044260 265 MEN 267 (511)
Q Consensus 265 ~E~ 267 (511)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 654
No 136
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=94.05 E-value=0.17 Score=54.30 Aligned_cols=91 Identities=20% Similarity=0.245 Sum_probs=63.9
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC--------CchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGM--------GCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~lL 252 (511)
..|++++|+++|++++|||.+.++-. .........+++|++. ..+|++|- |++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 57999999999999999999986621 1233456778899864 35666653 6777777788888887
Q ss_pred hcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEec
Q 044260 253 QVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSN 298 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~ 298 (511)
+.+ .++.|+. .|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~~--------------------~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLVT--------------------MCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEEE--------------------EEeeccceeEEEEEe
Confidence 654 4454322 256666677888764
No 137
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.68 E-value=0.32 Score=51.42 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHc-----CCCCCce---EEEecCCCchHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHY-----KLRGNIV---SYNLGGMGCSAGLISI 245 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~L-----Gl~~~~~---~~dl~g~gCsggl~al 245 (511)
+.+...+.++++++|+++|++++|||.++.... .+..-..+.++| |++++-. --++++++|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 334556688999999999999999999995532 334456677776 7864321 2256667788888888
Q ss_pred HHHHHHHhcCCCCeEEEEEecc
Q 044260 246 DLAKDLLQVHPNSYALVISMEN 267 (511)
Q Consensus 246 ~lA~~lL~~~~~~~aLVVs~E~ 267 (511)
..|..-=+-.+++++++++.|.
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEecc
Confidence 7663311123578899988886
No 138
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.51 E-value=0.28 Score=51.20 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----EEecCCCchHHHHHHHHHHHH
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS-----YNLGGMGCSAGLISIDLAKDL 251 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~dl~g~gCsggl~al~lA~~l 251 (511)
...+.++++++|+++|++++|||.+++... .+.+-..+.++||++++-.. -+++++++++-..+|..+...
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~ 282 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI 282 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence 344558899999999999999999996632 22345668999999743222 267778888888888766542
Q ss_pred HhcCCCCeEEEEE
Q 044260 252 LQVHPNSYALVIS 264 (511)
Q Consensus 252 L~~~~~~~aLVVs 264 (511)
+ .+++++|+++
T Consensus 283 ~--~~Gd~vll~~ 293 (345)
T TIGR00748 283 A--EPGDRILAVS 293 (345)
T ss_pred c--CCCCEEEEEE
Confidence 2 2344444443
No 139
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.13 E-value=0.24 Score=50.98 Aligned_cols=87 Identities=17% Similarity=0.190 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCCchHHHHHHHHH
Q 044260 172 ARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS---YNLGGMGCSAGLISIDLA 248 (511)
Q Consensus 172 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~al~lA 248 (511)
..+++.....++++++|+++|++++|||.++.... .+.+-..+.++||++++-.. -+.+++++++-..+|+.+
T Consensus 221 ~~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~ 296 (326)
T PRK05963 221 VFTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH
Confidence 34556677788999999999999999999886432 24556778999999754322 233444555555555433
Q ss_pred HHHHhcC---CCCeEEEEEe
Q 044260 249 KDLLQVH---PNSYALVISM 265 (511)
Q Consensus 249 ~~lL~~~---~~~~aLVVs~ 265 (511)
++.+ +++++|+++.
T Consensus 297 ---~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 ---NLEQPLREGERLLFAAA 313 (326)
T ss_pred ---HHhCCCCCCCEEEEEEE
Confidence 3332 4677887775
No 140
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=92.91 E-value=0.09 Score=52.75 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.+++-+|...+|+++.++.+.||.+|+++. ...-+..++..-+-.-|.+..+++--+. |+|-+.-.|+-..-.++.++
T Consensus 67 hdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliatg 145 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIATG 145 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEeeC
Confidence 455699999999999999999999999875 3555666666666677888788999999 89999999999999999998
Q ss_pred CCCeEEEEEeccCCC
Q 044260 256 PNSYALVISMENITL 270 (511)
Q Consensus 256 ~~~~aLVVs~E~~s~ 270 (511)
..+.++.-+.|.+|.
T Consensus 146 ~~dvivaggvelmsd 160 (465)
T KOG1392|consen 146 NADVIVAGGVELMSD 160 (465)
T ss_pred CcCEEEEcceeeccc
Confidence 776666667888885
No 141
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.72 E-value=0.37 Score=49.76 Aligned_cols=89 Identities=13% Similarity=0.210 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEE---ecCCCchHHHHHHHHH
Q 044260 172 ARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYN---LGGMGCSAGLISIDLA 248 (511)
Q Consensus 172 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~al~lA 248 (511)
..+++...+.++.+++|+++|++++|||.+++... .+..-..+.+++|++++-...+ .+++++++-..+|..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 34455667778899999999999999999886642 2345568999999974332222 4555555555565544
Q ss_pred HHHHhc---CCCCeEEEEEecc
Q 044260 249 KDLLQV---HPNSYALVISMEN 267 (511)
Q Consensus 249 ~~lL~~---~~~~~aLVVs~E~ 267 (511)
++. .+++++|+++...
T Consensus 309 ---~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 ---AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred ---HHhCCCCCCCEEEEEEech
Confidence 333 2467888887654
No 142
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=92.32 E-value=0.51 Score=48.28 Aligned_cols=77 Identities=16% Similarity=0.112 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCC---CceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 179 VMFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRG---NIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
...++++++|+++|++++|||.++... +......-........++.++ ....-++.++++++++..|..+...++.
T Consensus 206 ~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~ 285 (332)
T cd00825 206 GLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEH 285 (332)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhc
Confidence 346899999999999999999999774 333222333333444454320 1122366777888888888888777765
Q ss_pred C
Q 044260 255 H 255 (511)
Q Consensus 255 ~ 255 (511)
+
T Consensus 286 ~ 286 (332)
T cd00825 286 G 286 (332)
T ss_pred C
Confidence 5
No 143
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.70 E-value=0.72 Score=47.25 Aligned_cols=85 Identities=15% Similarity=0.131 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCCchHHHHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS---YNLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~al~lA~~ 250 (511)
+++.....++++++|+++|++++|||.+++.. +.+.+-..+.+++|++.+-.. -++++++|++...+|. +
T Consensus 221 ~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~ 293 (325)
T PRK12879 221 KWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---L 293 (325)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---H
Confidence 34455667889999999999999999998663 234556789999999743222 2344455556666664 3
Q ss_pred HHhcC---CCCeEEEEEe
Q 044260 251 LLQVH---PNSYALVISM 265 (511)
Q Consensus 251 lL~~~---~~~~aLVVs~ 265 (511)
+++.+ +++++|+++.
T Consensus 294 ~~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 294 ALEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 34543 3566776664
No 144
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.64 E-value=0.44 Score=49.10 Aligned_cols=84 Identities=10% Similarity=0.131 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCCchHHHHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSY---NLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~al~lA~~ 250 (511)
+.+.....++.+++|+++|++++|||.++..... ...-..++++||++++.... +.++++|++...+|+.
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---
Confidence 3455667789999999999999999999966431 12356889999998543322 3344444444445443
Q ss_pred HHhcC---CCCeEEEEE
Q 044260 251 LLQVH---PNSYALVIS 264 (511)
Q Consensus 251 lL~~~---~~~~aLVVs 264 (511)
+++.+ +++++|+++
T Consensus 299 ~~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 299 AIKQKKVQRGNKILLLG 315 (329)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 34443 456777665
No 145
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=91.15 E-value=0.63 Score=47.57 Aligned_cols=85 Identities=18% Similarity=0.280 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce--EE-EecCCCchHHHHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIV--SY-NLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~--~~-dl~g~gCsggl~al~lA~~ 250 (511)
++....+.++++++|+++|++++|||.+++... .+..-..++++||++.+-. .+ .+++++|+.-+.+|..+
T Consensus 215 ~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~-- 288 (318)
T TIGR00747 215 KHAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL-- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH--
Confidence 344555778899999999999999999996432 3445678999999984322 22 23345555666666443
Q ss_pred HHhcC---CCCeEEEEEe
Q 044260 251 LLQVH---PNSYALVISM 265 (511)
Q Consensus 251 lL~~~---~~~~aLVVs~ 265 (511)
++.+ +++++|+++.
T Consensus 289 -~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 -LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 3567777664
No 146
>PRK04262 hypothetical protein; Provisional
Probab=91.05 E-value=0.51 Score=49.22 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE--E---EecCCCchHHHHHHHHHH
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS--Y---NLGGMGCSAGLISIDLAK 249 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~--~---dl~g~gCsggl~al~lA~ 249 (511)
..+.++++++|+++|++++|||.+++.. +.+.+-..++++||++++-.. + +.+++++++-..+|..+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 3567789999999999999999988662 223455678999999744222 2 556666666666665543
No 147
>PRK06840 hypothetical protein; Validated
Probab=90.66 E-value=0.84 Score=47.26 Aligned_cols=81 Identities=20% Similarity=0.271 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce--EEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIV--SYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
....++++++|+++|++++|||.++.... .+..-..++++||++++-. .-+..+++|++-+.+|..+ ++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 45678999999999999999999875321 2344467899999984321 1144555555556555433 4443
Q ss_pred ---CCCeEEEEEe
Q 044260 256 ---PNSYALVISM 265 (511)
Q Consensus 256 ---~~~~aLVVs~ 265 (511)
+++++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4566666664
No 148
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=90.52 E-value=0.68 Score=48.98 Aligned_cols=85 Identities=14% Similarity=0.159 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCCchHHHHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS---YNLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~---~dl~g~gCsggl~al~lA~~ 250 (511)
+.+...+-++++++|+++|++++|||.++.... .+.+-..++++||++++-.. -+.+++++++-..+|+.+
T Consensus 276 ~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~-- 349 (379)
T PLN02326 276 KFAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA-- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH--
Confidence 344555678899999999999999999886643 22344568999999854322 245556666666666544
Q ss_pred HHhcC---CCCeEEEEEe
Q 044260 251 LLQVH---PNSYALVISM 265 (511)
Q Consensus 251 lL~~~---~~~~aLVVs~ 265 (511)
++.+ +++++|+++.
T Consensus 350 -~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 -VRSGKVKKGDVIATAGF 366 (379)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3433 4566766653
No 149
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=90.34 E-value=1.2 Score=43.65 Aligned_cols=76 Identities=17% Similarity=0.077 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCC---CCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLR---GNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~---~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
..++++++|+++|++++|||.++... .+...............+.+ .....-.+.++++++++..+..+..-++..
T Consensus 147 ~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~ 226 (254)
T cd00327 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE 226 (254)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCC
Confidence 46889999999999999999988663 33322222222333333332 011223455566777777776665555554
No 150
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.97 E-value=1.2 Score=45.53 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCCchHHHHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSY---NLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~al~lA~~ 250 (511)
+.....+.++.+++|+++|++++|||.++.... .+..-.++.+++|++.+-... +..+++|+..+..|. +
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~ 287 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---E 287 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---H
Confidence 445556778999999999999999999986532 345557789999997532222 234444555555553 3
Q ss_pred HHhcC---CCCeEEEEEe
Q 044260 251 LLQVH---PNSYALVISM 265 (511)
Q Consensus 251 lL~~~---~~~~aLVVs~ 265 (511)
+++.+ +++++|+++.
T Consensus 288 ~~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 288 AVRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 34443 3567777664
No 151
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=89.89 E-value=1.1 Score=47.79 Aligned_cols=93 Identities=19% Similarity=0.217 Sum_probs=57.8
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC--------CchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGM--------GCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~lL 252 (511)
..|++++|+++|++|+|||.+-.+- ......-...+.||+.++-..+|.+|- |++|...-+.++++|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 6899999999999999999887431 122334456678888433356676652 3445555555665554
Q ss_pred hcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEec
Q 044260 253 QVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSN 298 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~ 298 (511)
.. ..++.|+. .|.-|..+.|+||++
T Consensus 375 ~~-~~~~g~~~--------------------~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 375 RT-GGRFALCT--------------------MCIGVGQGIAIAIER 399 (400)
T ss_pred hc-CCCeEEEE--------------------EcccCCceeEEEEEe
Confidence 32 24454432 255566677777764
No 152
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=89.75 E-value=1.3 Score=47.41 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC--------CchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGM--------GCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~lL 252 (511)
..|++++|+++|++|+|||++-++- ..+...-+..+.||+.++-..+|.+|- |++|....++++++|-
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH
Confidence 6799999999999999999887431 122333456678998543456677762 3334444455555554
Q ss_pred h
Q 044260 253 Q 253 (511)
Q Consensus 253 ~ 253 (511)
.
T Consensus 376 ~ 376 (401)
T PRK09050 376 R 376 (401)
T ss_pred h
Confidence 3
No 153
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=89.70 E-value=1.2 Score=45.42 Aligned_cols=86 Identities=20% Similarity=0.261 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEE---ecCCCchHHHHHHHHHH
Q 044260 173 RKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYN---LGGMGCSAGLISIDLAK 249 (511)
Q Consensus 173 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~d---l~g~gCsggl~al~lA~ 249 (511)
.+.+.....++++++|+++|++++|||.++.... .+..-..+.+++|++++-...+ .++++++....+|..+
T Consensus 218 ~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~- 292 (320)
T cd00830 218 FKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA- 292 (320)
T ss_pred HHHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH-
Confidence 3455667789999999999999999999886632 3345567899999974332222 3344455555555443
Q ss_pred HHHhcC---CCCeEEEEEe
Q 044260 250 DLLQVH---PNSYALVISM 265 (511)
Q Consensus 250 ~lL~~~---~~~~aLVVs~ 265 (511)
++.+ +++++|+++.
T Consensus 293 --~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 --IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred --HHcCCCCCCCEEEEEEE
Confidence 3443 5678888775
No 154
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.64 E-value=1.1 Score=47.25 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHH-cCCCC-Cce----EEEecCCCchHHHHHHH
Q 044260 173 RKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINH-YKLRG-NIV----SYNLGGMGCSAGLISID 246 (511)
Q Consensus 173 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~-LGl~~-~~~----~~dl~g~gCsggl~al~ 246 (511)
.+++...+.++++++|+++|++++|||.++..... +.+-..+.++ ||+.. .-. --..++++|++...+|+
T Consensus 266 ~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~ 341 (372)
T PRK07515 266 FKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFH 341 (372)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHH
Confidence 35677778899999999999999999999876321 1222334566 56532 111 22556678888888887
Q ss_pred HHHHHHhcCCCCeEEEEEe
Q 044260 247 LAKDLLQVHPNSYALVISM 265 (511)
Q Consensus 247 lA~~lL~~~~~~~aLVVs~ 265 (511)
.+.+-+ .+++++|+++.
T Consensus 342 ~~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 342 KHSDDL--AAGDLGVICSF 358 (372)
T ss_pred HHhccC--CCCCEEEEEEe
Confidence 764432 35677777764
No 155
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=89.64 E-value=6.7 Score=38.42 Aligned_cols=114 Identities=14% Similarity=-0.029 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCC----------------CCCc-HH--------HHHHHHcCCCCCceE
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFN----------------PTPS-LS--------AMVINHYKLRGNIVS 230 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~----------------~~Ps-~a--------~~I~~~LGl~~~~~~ 230 (511)
...|++.++.+++++. +++|.+|++|..+. ..|. ++ ..+.-..|. ....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 4456688888888653 57888998875321 2341 22 222223333 3567
Q ss_pred EEecCCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEeccCC
Q 044260 231 YNLGGMGCSAGLISIDLAKDLLQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSNKRS 301 (511)
Q Consensus 231 ~dl~g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~~~~ 301 (511)
.-|.. |=.++-.||.-|..+|+.+ .+.||||..|-.....|.....+. ....--|.|++|+++..
T Consensus 108 tal~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~~----~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPER----DPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhccccc----CCCcCEEEEEEecCCCC
Confidence 77774 7788999999999999999 899999999997654444321110 12234477788886554
No 156
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=88.47 E-value=1.6 Score=44.90 Aligned_cols=83 Identities=10% Similarity=0.160 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCCchHHHHHHHHHHHHH
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSY---NLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~---dl~g~gCsggl~al~lA~~lL 252 (511)
+....-++++++|+++|++++|||.+++.... +.....+.++||++++-... +.++++|++...+|..+ +
T Consensus 224 ~~~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~ 296 (326)
T CHL00203 224 AVFQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---I 296 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---H
Confidence 33456778899999999999999999866432 34556789999998443222 34445566666666544 3
Q ss_pred hcC---CCCeEEEEEe
Q 044260 253 QVH---PNSYALVISM 265 (511)
Q Consensus 253 ~~~---~~~~aLVVs~ 265 (511)
+.+ +++++|+++.
T Consensus 297 ~~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 297 QNNKIQPGQIIVLSGF 312 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 433 4567777663
No 157
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=88.11 E-value=1.5 Score=46.91 Aligned_cols=77 Identities=19% Similarity=0.281 Sum_probs=48.4
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC--------CchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGM--------GCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~--------gCsggl~al~lA~~lL 252 (511)
..|++++|+++|++|+|||.+-++ ...+...-+..+.||+.++-..+|.+|- |++|....++++.+|-
T Consensus 299 ~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr 374 (400)
T TIGR02430 299 VPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHH
Confidence 689999999999999999987733 1123344556778998544456677651 2344455556666664
Q ss_pred hcCCCCeEEE
Q 044260 253 QVHPNSYALV 262 (511)
Q Consensus 253 ~~~~~~~aLV 262 (511)
.. ..++.|+
T Consensus 375 ~~-~~~~g~~ 383 (400)
T TIGR02430 375 RS-GGRYALC 383 (400)
T ss_pred hc-CCCEEEE
Confidence 32 2344443
No 158
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=87.67 E-value=2.2 Score=45.41 Aligned_cols=74 Identities=22% Similarity=0.269 Sum_probs=51.0
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CCchHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIVSYNLGG--------MGCSAGLISIDLAKDL 251 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 251 (511)
..|++++++++|++|+|||++=++ +- ....-+-.+.||+..+ .+|.+| .||+|....+.++.+|
T Consensus 288 ~~A~~~al~~Agl~~~DiDv~Ei~daF-----a~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~qL 360 (388)
T PRK06366 288 IPATRKLLEKQNKSIDYYDLVEHNEAF-----SIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINAL 360 (388)
T ss_pred HHHHHHHHHHcCCCHHHcceeeccchh-----HHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHHH
Confidence 689999999999999999988765 31 2233455677887643 566665 3667777777777777
Q ss_pred HhcCCCCeEEE
Q 044260 252 LQVHPNSYALV 262 (511)
Q Consensus 252 L~~~~~~~aLV 262 (511)
-+.+ .++.|+
T Consensus 361 ~~~~-~~~g~~ 370 (388)
T PRK06366 361 KTRH-MKTGLA 370 (388)
T ss_pred HhcC-CCeEEE
Confidence 6543 345443
No 159
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=87.66 E-value=2.4 Score=45.23 Aligned_cols=84 Identities=8% Similarity=0.027 Sum_probs=49.7
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeeChHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQ-IAFGSGFKC 474 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG~~~ 474 (511)
.+|||.|-+|-.-...--...+.||+.++++.+| -..-.+||...+|=...+.++..+=+-+.|.+.+. +..|.|. -
T Consensus 306 ~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~~~c~~gg~-g 383 (391)
T PRK07661 306 LSDIGLFELNEAFASQSIQVIRELGLDEEKVNVN-GGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGM-G 383 (391)
T ss_pred HHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCCC-CChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccCh-h
Confidence 4899999999877666666678999988777543 33445788777665555444443212133344332 3334443 2
Q ss_pred hhhheEE
Q 044260 475 NSAVWKA 481 (511)
Q Consensus 475 ~s~v~r~ 481 (511)
.+++|+.
T Consensus 384 ~a~~~e~ 390 (391)
T PRK07661 384 AAGVFEL 390 (391)
T ss_pred hEEEEEe
Confidence 4566654
No 160
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=87.31 E-value=1.9 Score=46.02 Aligned_cols=84 Identities=15% Similarity=0.069 Sum_probs=51.1
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCE-EEEEeeChHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDR-TWQIAFGSGFKC 474 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~-VlliafGsG~~~ 474 (511)
.+|||.+=+|-......-...+.||+.++++.+| -..--+||...++-...+.++..+=+-+.|++ |.-+..|.|..
T Consensus 312 ~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g- 389 (397)
T PRK06954 312 AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVN-GGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA- 389 (397)
T ss_pred HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcC-CChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh-
Confidence 5899999888776555455568899998887543 34555899888885544444433211145555 33444555543
Q ss_pred hhhheEE
Q 044260 475 NSAVWKA 481 (511)
Q Consensus 475 ~s~v~r~ 481 (511)
.+++++.
T Consensus 390 ~a~~~e~ 396 (397)
T PRK06954 390 TAMGIEL 396 (397)
T ss_pred hEEEEEe
Confidence 4455553
No 161
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=86.87 E-value=3.3 Score=44.02 Aligned_cols=91 Identities=16% Similarity=0.179 Sum_probs=56.1
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CCchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG--------MGCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~lL 252 (511)
..|++++|+++|++|+|||++=++-. .+...-+..+.||+.. ..+|.+| .||+|....+.++.+|-
T Consensus 288 ~~a~~~al~~agl~~~did~~ei~d~----F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 361 (387)
T PRK07850 288 VQATAKVLEKAGMKIGDIDLVEINEA----FASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHELE 361 (387)
T ss_pred HHHHHHHHHHcCCCHHHcCeeeeccc----chHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHHHH
Confidence 68999999999999999999876521 1222234457788753 3566665 13344445555666664
Q ss_pred hcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEec
Q 044260 253 QVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSN 298 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~ 298 (511)
+. ..++.|+. .|.-|..++|++|++
T Consensus 362 ~~-~~~~g~~~--------------------~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 362 RT-DKSTALIT--------------------MCAGGALSTGTIIER 386 (387)
T ss_pred hc-CCCeEEEE--------------------EccccCceeEEEEEe
Confidence 43 23444432 255566677777764
No 162
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=86.63 E-value=2.3 Score=45.43 Aligned_cols=92 Identities=21% Similarity=0.273 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CCchHHHHHHHHHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG--------MGCSAGLISIDLAKDL 251 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 251 (511)
...|+++||+++|++|+|||++-.+- ......-...+.||+.+ ..+|.+| .|++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 37899999999999999999986331 12233345567788753 2344443 1444555555555555
Q ss_pred HhcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEEEEec
Q 044260 252 LQVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAILLSN 298 (511)
Q Consensus 252 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~lLs~ 298 (511)
-..+ .++.|+ +.|.-|-.++|+||++
T Consensus 373 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYGMV--------------------TMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeEEE--------------------EEcccCCceeEEEEEe
Confidence 4332 234332 2355566677777764
No 163
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=86.57 E-value=1.4 Score=46.08 Aligned_cols=87 Identities=13% Similarity=0.147 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC-C--c--eEEEecCCCchHHHHHHHHHHHHHh
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG-N--I--VSYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~-~--~--~~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
..++.+++|+++|++|+|||.|+.. ++..+.....+..+.+-+|-.. . + ..-.+...+.++|...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998865 4332222222334444454311 1 1 1112332334444444545555555
Q ss_pred cC--CCCeEEEEEec
Q 044260 254 VH--PNSYALVISME 266 (511)
Q Consensus 254 ~~--~~~~aLVVs~E 266 (511)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 65 46789988854
No 164
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=85.96 E-value=4.1 Score=43.36 Aligned_cols=67 Identities=24% Similarity=0.278 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CCchHHHHHHHHHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG--------MGCSAGLISIDLAKDL 251 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~l 251 (511)
...|++++|+++|++|+|||.+=++- ..+...-+-.+.||+.+ ..+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 36899999999999999999886552 12334455677788763 2355554 2566666667777777
Q ss_pred H
Q 044260 252 L 252 (511)
Q Consensus 252 L 252 (511)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 165
>PRK05790 putative acyltransferase; Provisional
Probab=85.87 E-value=2.8 Score=44.50 Aligned_cols=84 Identities=12% Similarity=-0.016 Sum_probs=51.8
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHh
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 475 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 475 (511)
.+|||.+=+|-.-....-...+.||+.+..+.++ --.--+||...++=...+.++..+=+=+.+.+.+.-.-|.|....
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~g~ 386 (393)
T PRK05790 308 LADLDLIEINEAFAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQGV 386 (393)
T ss_pred HHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCcee
Confidence 4799999999866555555678899987776432 234458999877766666555443111233344444445555555
Q ss_pred hhheE
Q 044260 476 SAVWK 480 (511)
Q Consensus 476 s~v~r 480 (511)
+++++
T Consensus 387 ~~~~e 391 (393)
T PRK05790 387 ALIVE 391 (393)
T ss_pred EEEEE
Confidence 66665
No 166
>PRK09051 beta-ketothiolase; Provisional
Probab=85.46 E-value=3.4 Score=44.04 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=36.4
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG 235 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 235 (511)
..|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+ ..+|.+|
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~G 343 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNG 343 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCc
Confidence 6899999999999999999987641 12344556678899863 4666665
No 167
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=85.45 E-value=2.4 Score=44.92 Aligned_cols=84 Identities=11% Similarity=-0.025 Sum_probs=52.6
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHh
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 475 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 475 (511)
.+|||.+=+|-.-....-...+.||+.++.+.++ --+--+||...++-...+.++..+=+-+.+.+.+....|.|-...
T Consensus 297 ~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~ 375 (382)
T PRK07801 297 IDDIDVVEINEAFAPVVLAWLKETGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTAN 375 (382)
T ss_pred HHHcCEeeecccchHHHHHHHHHhCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccccee
Confidence 5799999999988777777889999998877543 234448888777766655554442111223333434445454444
Q ss_pred hhheE
Q 044260 476 SAVWK 480 (511)
Q Consensus 476 s~v~r 480 (511)
+++++
T Consensus 376 ~~vl~ 380 (382)
T PRK07801 376 VTIIE 380 (382)
T ss_pred EEEEE
Confidence 55554
No 168
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=85.12 E-value=3.3 Score=44.09 Aligned_cols=58 Identities=9% Similarity=-0.040 Sum_probs=43.5
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchH---HHHHHHHHHc
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSL---WYELAYSEAK 454 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi---~~~La~~~~~ 454 (511)
.+|||.+=+|-.-....-...+.||+.++++.+| --+--+||...++- ...|.+.+++
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~-GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVN-GGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC-CcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 5899999999998877778889999998877543 23445788886666 6666666654
No 169
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=85.05 E-value=4.1 Score=43.01 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEec--------CCCchHHHHHHHHHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLG--------GMGCSAGLISIDLAKDL 251 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~--------g~gCsggl~al~lA~~l 251 (511)
...|++++|+++|++|+|||.+..+- ..........+.||+.+ ..+|.+ -.|++|......+..++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 47899999999999999999997642 12233455667888863 234443 13667777777777777
Q ss_pred HhcCCCCeEE
Q 044260 252 LQVHPNSYAL 261 (511)
Q Consensus 252 L~~~~~~~aL 261 (511)
-+.+ .++.+
T Consensus 334 ~~~~-~~~g~ 342 (361)
T PRK06690 334 KRED-MKYGI 342 (361)
T ss_pred HHhC-CCEEE
Confidence 5543 34433
No 170
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=84.84 E-value=1.8 Score=44.91 Aligned_cols=88 Identities=22% Similarity=0.254 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce--EEEecCCCchHHHHHHHHH
Q 044260 171 EARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIV--SYNLGGMGCSAGLISIDLA 248 (511)
Q Consensus 171 ~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~--~~dl~g~gCsggl~al~lA 248 (511)
+-.+++...+.++++++|+++|++++|||.+|... .-..+-..+++++|++++-. ..+-.| .+++..+-|.+.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~ 290 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALD 290 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHH
Confidence 56678999999999999999999999999998542 23345577999999975433 333333 344443333333
Q ss_pred HHHHhcCC---CCeEEEEE
Q 044260 249 KDLLQVHP---NSYALVIS 264 (511)
Q Consensus 249 ~~lL~~~~---~~~aLVVs 264 (511)
. +++.++ +.++|+++
T Consensus 291 ~-~~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 291 E-ALREGRIKPGDLVLLEA 308 (323)
T ss_pred H-HhhhCCCCCCCEEEEEe
Confidence 2 233333 44555444
No 171
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=84.49 E-value=3.3 Score=36.83 Aligned_cols=74 Identities=22% Similarity=0.350 Sum_probs=47.9
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CCchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG--------MGCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~lL 252 (511)
..|++++|+++|++++|||.+=++-. .-...-...+.||+.+ ..+|.+| .||+|....+.++.+|-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 68999999999999999999876621 1233445677788763 4555554 36777778888888876
Q ss_pred hcCCCCeEE
Q 044260 253 QVHPNSYAL 261 (511)
Q Consensus 253 ~~~~~~~aL 261 (511)
+.+ .++.+
T Consensus 99 ~~~-~~~gl 106 (123)
T PF02803_consen 99 RRG-GRYGL 106 (123)
T ss_dssp HHT-TSEEE
T ss_pred Hhc-hhhhh
Confidence 643 34433
No 172
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=84.23 E-value=3.1 Score=44.54 Aligned_cols=85 Identities=8% Similarity=-0.090 Sum_probs=50.1
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHh
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 475 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 475 (511)
.+|||.+=+|-.-....-...+.||+.++.+.+| -..--+||...++-...+.++..+=+-+.|.+.+...-+.|-.-.
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g~ 398 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGM 398 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhh
Confidence 4789988777655444444568899977666432 334558999888777776666553222344444443333333344
Q ss_pred hhheEE
Q 044260 476 SAVWKA 481 (511)
Q Consensus 476 s~v~r~ 481 (511)
+++++.
T Consensus 399 a~~~e~ 404 (406)
T PRK07851 399 AMVLER 404 (406)
T ss_pred EEEEEe
Confidence 566654
No 173
>PLN02287 3-ketoacyl-CoA thiolase
Probab=84.22 E-value=3.9 Score=44.47 Aligned_cols=91 Identities=12% Similarity=0.049 Sum_probs=54.5
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCC--CEEE-EEeeChHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRG--DRTW-QIAFGSGF 472 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~G--d~Vl-liafGsG~ 472 (511)
.+|||.+=+|-.-...--...+.||+.++++.+| -..--+||...+|=...+.++..+=+-+.| .+.+ .+..|.|.
T Consensus 348 ~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~s-GG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~ 426 (452)
T PLN02287 348 LDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVN-GGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGM 426 (452)
T ss_pred HHHCCEEEecchHHHHHHHHHHHcCCCccccCCC-CcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccCc
Confidence 5799999999665444444578999988777543 234447888666655444444332111223 3333 33334333
Q ss_pred HHhhhheEEecccCCC
Q 044260 473 KCNSAVWKALRTINPA 488 (511)
Q Consensus 473 ~~~s~v~r~~~~~~~~ 488 (511)
-.+++++.++.++.-
T Consensus 427 -g~a~~ie~~~~~~~~ 441 (452)
T PLN02287 427 -GAAAVFERGDSVDEL 441 (452)
T ss_pred -eeEEEEEecCchhhh
Confidence 357899999888743
No 174
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=83.79 E-value=2.1 Score=45.60 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=34.5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG 235 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 235 (511)
..|++++|+++|++|+|||.+-++-. .+...-+..+.||+.. ..+|++|
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d~----f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANEA----FAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCc----cHHHHHHHHHHhCCCC--ccCCcCC
Confidence 68999999999999999999886421 2333455677888752 2345553
No 175
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=83.78 E-value=2.4 Score=45.01 Aligned_cols=82 Identities=12% Similarity=-0.038 Sum_probs=49.7
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHh
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 475 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 475 (511)
.+|||.+-+|-...-..-...+.||+....+.++ -.+--+||+..++-...+.++..+=+=+.+.+.+.-+.+.|-.-.
T Consensus 303 ~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~~-GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~ 381 (386)
T TIGR01930 303 ISDIDLFEINEAFAAQVLACIKELGLDLEKVNVN-GGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGI 381 (386)
T ss_pred HHHCCeeehcchhHHHHHHHHHHhCCChhhcCCC-CChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceE
Confidence 4799999999877655555678899865555322 234457999877777666665543111245666654455443333
Q ss_pred hhh
Q 044260 476 SAV 478 (511)
Q Consensus 476 s~v 478 (511)
+++
T Consensus 382 ~~~ 384 (386)
T TIGR01930 382 AVI 384 (386)
T ss_pred EEE
Confidence 343
No 176
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=83.72 E-value=3.4 Score=44.21 Aligned_cols=54 Identities=9% Similarity=0.051 Sum_probs=38.0
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAY 450 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~ 450 (511)
.+|||.|-+|-.-....-...+.||++++++.++ -..--+||...++=...+.+
T Consensus 317 ~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~-GG~la~GHP~GAsG~~~~~~ 370 (402)
T PRK08242 317 VDDIDLFELNEAFASVVLRFMQALDIPHDKVNVN-GGAIAMGHPLGATGAMILGT 370 (402)
T ss_pred HHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcC-CCHHhcCCcHHHHHHHHHHH
Confidence 5899999999887777777889999998877542 23344677766554444333
No 177
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=83.56 E-value=2.8 Score=43.78 Aligned_cols=89 Identities=18% Similarity=0.106 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHhC--CCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc------eEEEecCCCchHHHHH
Q 044260 173 RKEAECVMFGALDELFAKT--SLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI------VSYNLGGMGCSAGLIS 244 (511)
Q Consensus 173 ~~ea~~l~~~Aa~~aL~~a--gi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~------~~~dl~g~gCsggl~a 244 (511)
.+.+.....++++++|+++ |++++|||.+++.... ..+-..+.++||++++- ..-+.+++++++-..+
T Consensus 254 ~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~ 329 (361)
T cd00831 254 PRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYV 329 (361)
T ss_pred HHHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHH
Confidence 3455666788899999999 9999999999876532 23445689999997432 1236677777777777
Q ss_pred HHHHHHHHhcCCCCeEEEEEe
Q 044260 245 IDLAKDLLQVHPNSYALVISM 265 (511)
Q Consensus 245 l~lA~~lL~~~~~~~aLVVs~ 265 (511)
|+.+.+-=+..+++++|+++.
T Consensus 330 L~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 330 LAYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHHhCCCCCCCEEEEEEE
Confidence 776643211124567777664
No 178
>PLN03169 chalcone synthase family protein; Provisional
Probab=81.59 E-value=4.8 Score=42.90 Aligned_cols=89 Identities=15% Similarity=0.207 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE------EEecCCCchHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS------YNLGGMGCSAGLISIDL 247 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gCsggl~al~l 247 (511)
+.+....-+.++++|+++|++++|||.+.+...+. ...+-..++++||++++-.. -+.+++++++-..+|+.
T Consensus 277 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~--n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~ 354 (391)
T PLN03169 277 QKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPG--GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEY 354 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence 34555666778999999999999999443322222 24566778999999854322 26677788888888876
Q ss_pred HHHH--Hh-cCCCCeEEEEE
Q 044260 248 AKDL--LQ-VHPNSYALVIS 264 (511)
Q Consensus 248 A~~l--L~-~~~~~~aLVVs 264 (511)
+..- ++ ..+++++|+++
T Consensus 355 ~~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 355 MREELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHHhhcccCCCCCcEEEEEE
Confidence 5432 11 11346666665
No 179
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=81.55 E-value=6 Score=42.30 Aligned_cols=85 Identities=11% Similarity=0.039 Sum_probs=48.5
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcc---cccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeeChH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDR---HMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQ-IAFGSG 471 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e---~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG 471 (511)
.+|||.+-+|-.-....-...+.||+.++ ++.++ -..--+||...++=...+.++..+=+-+.|.+.+. +..|.|
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg 393 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGG 393 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Confidence 47999999998877666667888998763 44322 22344788876665544444433211123334332 333333
Q ss_pred HHHhhhheEEe
Q 044260 472 FKCNSAVWKAL 482 (511)
Q Consensus 472 ~~~~s~v~r~~ 482 (511)
. -.+++++.+
T Consensus 394 ~-g~a~~~e~~ 403 (404)
T PRK06205 394 Q-GLAAVFERV 403 (404)
T ss_pred h-hhEEEEEec
Confidence 3 345666654
No 180
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=81.28 E-value=4.2 Score=43.33 Aligned_cols=55 Identities=5% Similarity=-0.112 Sum_probs=35.8
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYS 451 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~ 451 (511)
.+|||.+-+|-......-...+.||+.++++.++ -..--+||...++=...+..+
T Consensus 307 ~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 307 VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHHH
Confidence 4789998888665444444578899988877543 234457887776654444433
No 181
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=80.93 E-value=6.1 Score=41.72 Aligned_cols=82 Identities=18% Similarity=0.236 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC-----CCceEE-EecCCCchHHHHHHHHHHH
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR-----GNIVSY-NLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~-----~~~~~~-dl~g~gCsggl~al~lA~~ 250 (511)
..-...|+++.+++.|.+|+|.|.+++.. |.|-+....+..+|.+ +..... .++++.|.+...+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 34567899999999999999999998764 3455556667777665 334444 68888998888665 333
Q ss_pred HHhcC-CCCeEEEEE
Q 044260 251 LLQVH-PNSYALVIS 264 (511)
Q Consensus 251 lL~~~-~~~~aLVVs 264 (511)
|=++. +++++|+++
T Consensus 282 L~~a~~~G~rIl~~S 296 (377)
T COG3425 282 LDNAKLPGDRILLFS 296 (377)
T ss_pred HhhcCCCCCEEEEEe
Confidence 33333 456666554
No 182
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=80.56 E-value=4.6 Score=44.46 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=49.5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCCchH--------HHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-IVSYNLGGMGCSA--------GLISIDLAKDL 251 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~-~~~~dl~g~gCsg--------gl~al~lA~~l 251 (511)
..|++++++++|++++|||++=+..+ .|...-+-.+.||+.++ -..+|++| |.-+ ++.++--+..-
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHHH
Confidence 46999999999999999999864422 23444556788998743 23566665 4332 44454444444
Q ss_pred HhcCCCCeEEEEE
Q 044260 252 LQVHPNSYALVIS 264 (511)
Q Consensus 252 L~~~~~~~aLVVs 264 (511)
|+..+.+++||.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 4444456666644
No 183
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=80.39 E-value=3.8 Score=43.64 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=51.6
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeeChHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQ-IAFGSGFKC 474 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG~~~ 474 (511)
.+|||.+=+|-.-...--...+.||+.++.+.++ --.--+||...++=...+.++..+=+-+.|++.+. +..|.| .-
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG-~g 385 (393)
T PRK08235 308 VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGG-QG 385 (393)
T ss_pred HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-ce
Confidence 4789999888777666667788999988777542 23444788877776655555544322245566544 334444 33
Q ss_pred hhhheE
Q 044260 475 NSAVWK 480 (511)
Q Consensus 475 ~s~v~r 480 (511)
.+++|+
T Consensus 386 ~a~~~e 391 (393)
T PRK08235 386 DAVLIE 391 (393)
T ss_pred EEEEEE
Confidence 455554
No 184
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=79.31 E-value=7.4 Score=41.55 Aligned_cols=53 Identities=9% Similarity=-0.048 Sum_probs=32.5
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELA 449 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La 449 (511)
.+|||++=+|-.-....-...+.|+++.+++.+| -..--+||.-.++=...+.
T Consensus 307 p~DID~~ei~dafa~~~l~~~~~l~~~~~~vN~s-Gg~~a~GHplgAtG~~~~~ 359 (392)
T PRK06633 307 VNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNIN-GGAIAIGHPIGASGGRVLI 359 (392)
T ss_pred HHHcCeeehhhHHHHHHHHHHhhhCCCccccCCC-CchHhhCCcHHHHHHHHHH
Confidence 4799999988443222122367788877666543 3455689997777433333
No 185
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=77.22 E-value=7.2 Score=39.71 Aligned_cols=92 Identities=11% Similarity=0.092 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC-Cce------EEEecCCCchHHHHH
Q 044260 172 ARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG-NIV------SYNLGGMGCSAGLIS 244 (511)
Q Consensus 172 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~-~~~------~~dl~g~gCsggl~a 244 (511)
..+.+.....++++++|+++|++ +|||.++...... +..-..+.++++++. .+. .-++++++|+....+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 44567778899999999999999 9999887553221 155677889999742 111 224555566666666
Q ss_pred HHHHHHHHhcCCCCeEEEEEecc
Q 044260 245 IDLAKDLLQVHPNSYALVISMEN 267 (511)
Q Consensus 245 l~lA~~lL~~~~~~~aLVVs~E~ 267 (511)
|..+-.--+-.+++++|+++.-.
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEecc
Confidence 65442211112467888887543
No 186
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=77.12 E-value=8.3 Score=40.83 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 225 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~ 225 (511)
..|++++++++|++|+|||.+-.. +. +....+..+.||+.
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~d~f-----~~~~~~~~e~lg~~ 328 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINEAF-----AAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeechh-----HHHHHHHHHHhCCC
Confidence 589999999999999999988654 21 12334456778875
No 187
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=75.17 E-value=7 Score=41.37 Aligned_cols=75 Identities=9% Similarity=0.082 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCC-----------ceEEEecCCCchH
Q 044260 173 RKEAECVMFGALDELFAKTSLKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGN-----------IVSYNLGGMGCSA 240 (511)
Q Consensus 173 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s-~~~~~Ps~a~~I~~~LGl~~~-----------~~~~dl~g~gCsg 240 (511)
.+...+...++.+++|+++|++++|||.+++... +.....+. .++.++++.+.+ ...=.+++++|++
T Consensus 200 ~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas 278 (379)
T TIGR01835 200 NEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGS 278 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHH
Confidence 3445566788999999999999999999887652 11111222 235566665421 1122666667777
Q ss_pred HHHHHHHH
Q 044260 241 GLISIDLA 248 (511)
Q Consensus 241 gl~al~lA 248 (511)
-..+|..+
T Consensus 279 ~~l~L~~~ 286 (379)
T TIGR01835 279 LYLGLASL 286 (379)
T ss_pred HHHHHHHH
Confidence 77666544
No 188
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=75.05 E-value=14 Score=39.28 Aligned_cols=49 Identities=16% Similarity=0.019 Sum_probs=33.5
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCc---ccccchhhccccccccccchHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSD---RHMEPSRMTLYRFGNTSSSSLW 445 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSasi~ 445 (511)
.+|||.+=+|-.-....-...+.||+-+ +.+.++ --+--+||...++=.
T Consensus 299 ~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~GhP~GAtG~ 350 (387)
T PRK08947 299 ISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLN-GGAIALGHPLGCSGA 350 (387)
T ss_pred HHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCC-CchhhcCCCccccHH
Confidence 4899999999988887778889999844 455432 123346776555443
No 189
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=74.72 E-value=10 Score=39.65 Aligned_cols=43 Identities=9% Similarity=0.089 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
...|++++|+++|++++|||++=++.. .+...-+..+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 368999999999999999998865522 2334455667788764
No 190
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=74.55 E-value=0.98 Score=39.51 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=44.3
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC---CceEE----EecCCCchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG---NIVSY----NLGGMGCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~---~~~~~----dl~g~gCsggl~al~lA~~lL 252 (511)
.++++++|+++|++|+|||.|... +++....+.-+.-+.+-|+-.. .+..- .++....++|+.++..+--.+
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l 107 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLAL 107 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHHH
Confidence 788999999999999999999865 4332223444555666666431 12221 233345667777777776666
Q ss_pred hcC
Q 044260 253 QVH 255 (511)
Q Consensus 253 ~~~ 255 (511)
+.+
T Consensus 108 ~~~ 110 (119)
T PF02801_consen 108 EHG 110 (119)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 191
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=74.16 E-value=14 Score=39.82 Aligned_cols=85 Identities=9% Similarity=-0.045 Sum_probs=46.7
Q ss_pred cccccEEEecCCchHHHHHHHHHcC-----------------CCcccccchhhccccccccccchHHHHHHHHHHcCCCC
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQ-----------------LSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIK 458 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~ 458 (511)
.+|||.+-+|-.-....-...+.|+ ++.+.+.++ --+--+||...++-...+.++..+=+-+
T Consensus 326 ~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gasG~~~~~e~~~qLrg~ 404 (428)
T PRK08963 326 LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVL-GGSIAYGHPFAATGARMITQTLHELRRR 404 (428)
T ss_pred HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHHHHhhc
Confidence 5899999999886554444444442 333344321 1123378877666555555544432224
Q ss_pred CCCEEEEEeeChHHHHhhhheEE
Q 044260 459 RGDRTWQIAFGSGFKCNSAVWKA 481 (511)
Q Consensus 459 ~Gd~VlliafGsG~~~~s~v~r~ 481 (511)
.|++.+...-+.|-...+++++.
T Consensus 405 ~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 405 GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCCEEEEEEccccChhhEEEEEe
Confidence 67776654444444445666653
No 192
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=73.79 E-value=9.3 Score=37.43 Aligned_cols=58 Identities=17% Similarity=0.145 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTP-SLSAMVINHYKLRGNIVSYNLGG 235 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~P-s~a~~I~~~LGl~~~~~~~dl~g 235 (511)
+.....++++|.++|++++|||.++|++.|+..+- -++.-+++-|.+..+++.+.++.
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 34578899999999999999999999998875543 34444555566555677888873
No 193
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=72.91 E-value=9.8 Score=39.87 Aligned_cols=77 Identities=13% Similarity=0.087 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-E--E-ecCCCchHHHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS-Y--N-LGGMGCSAGLISIDLAK 249 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~-~--d-l~g~gCsggl~al~lA~ 249 (511)
+.+....-++++++|+++|++++|||.+++... .+.+-..+.++||++++-.. . + .++++.++...+|+.+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~- 312 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL- 312 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH-
Confidence 345566678899999999999999999997642 23455789999999853322 1 2 3445555555555533
Q ss_pred HHHhcCCC
Q 044260 250 DLLQVHPN 257 (511)
Q Consensus 250 ~lL~~~~~ 257 (511)
+..++.
T Consensus 313 --~~~~~~ 318 (353)
T PRK12880 313 --DTPKEF 318 (353)
T ss_pred --HHcCCc
Confidence 444443
No 194
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=72.61 E-value=10 Score=33.43 Aligned_cols=62 Identities=15% Similarity=0.141 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHc-CCCCCceEEEecCCCchHH
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLF--NPTPSLSAMVINHY-KLRGNIVSYNLGGMGCSAG 241 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g~gCsgg 241 (511)
..+-..+-.++.+++++++++||--+++..++| ...| +..++++ |+. +++-++...|.=-|.
T Consensus 18 I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~Gw~-~Vplmc~qEm~V~gs 82 (117)
T TIGR01796 18 IGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFP---AAAARGLPGWT-DVPVMCAQEIPVEGS 82 (117)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccCh---HHHHHhccCCC-CcceeccCcCCCCCC
Confidence 333344555677789999999999999998765 4466 4556666 987 788777776554443
No 195
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=70.26 E-value=25 Score=37.97 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN 204 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~ 204 (511)
...|++++++++|++|+|||++=++
T Consensus 311 ~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 311 PAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec
Confidence 3579999999999999999999766
No 196
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=68.84 E-value=8.2 Score=40.69 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC-CCce----EEEecCCCchHHHHHHHHHHHHHh
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR-GNIV----SYNLGGMGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~-~~~~----~~dl~g~gCsggl~al~lA~~lL~ 253 (511)
..++++++|+++|++++|||.+... +++..-.+.-+..+.+-++-+ +.+. .-.++...+++|+.++-.+...|+
T Consensus 277 ~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 356 (406)
T cd00834 277 AARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALR 356 (406)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHh
Confidence 3678999999999999999999866 444333444455566666642 1111 112333456677777777777777
Q ss_pred cC
Q 044260 254 VH 255 (511)
Q Consensus 254 ~~ 255 (511)
.+
T Consensus 357 ~~ 358 (406)
T cd00834 357 DG 358 (406)
T ss_pred cC
Confidence 65
No 197
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=68.75 E-value=16 Score=38.86 Aligned_cols=74 Identities=18% Similarity=0.105 Sum_probs=43.5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC---CceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG---NIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~---~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
.++++++|+++|++|+|||.+... +++..-.+.-...|.+.+|-+. ..+. .+....+++|+..+..+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~-~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKG-LTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCc-ccccChhhcchHHHHHHHHHHhcC
Confidence 589999999999999999998755 4433223444556677776321 1111 133334445555554444445544
No 198
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=68.62 E-value=13 Score=39.69 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC----------------ceEEEecC--------
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGN----------------IVSYNLGG-------- 235 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g-------- 235 (511)
..|+++||+++|++++|||++=++ +- +...-+..+.||+.+. -..+|.+|
T Consensus 272 ~~A~~~al~~Agi~~~DID~~Ei~d~F-----a~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDAF-----AANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHcCCCHHHcCeeehhhhh-----HHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 689999999999999999988655 31 2233445566666531 13455554
Q ss_pred CCchHHHHHHHHHHHHHh
Q 044260 236 MGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 236 ~gCsggl~al~lA~~lL~ 253 (511)
.||+|....++++.+|-.
T Consensus 347 ~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 347 IGASGAAICAELCFELKG 364 (393)
T ss_pred ccccHHHHHHHHHHHHhh
Confidence 256666666777777754
No 199
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=68.22 E-value=38 Score=35.99 Aligned_cols=82 Identities=12% Similarity=-0.013 Sum_probs=47.2
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCc---ccccchhhccccccccccc---hHHHHHHHHHHcCCCCCCCEEEEEeeC
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSD---RHMEPSRMTLYRFGNTSSS---SLWYELAYSEAKGRIKRGDRTWQIAFG 469 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSa---si~~~La~~~~~g~l~~Gd~VlliafG 469 (511)
.+|||.+=+|-.-...--...+.||+-+ +++.++= -+--+||...+ .+...|.+...+ +.+.+.+....|
T Consensus 297 p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~G-G~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~ 372 (385)
T TIGR02445 297 ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCI 372 (385)
T ss_pred HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEec
Confidence 4799999999988777777789999843 4554432 23335665444 444555554433 334444443333
Q ss_pred hHHHHhhhheEE
Q 044260 470 SGFKCNSAVWKA 481 (511)
Q Consensus 470 sG~~~~s~v~r~ 481 (511)
.|-.-.+++++.
T Consensus 373 g~g~g~a~~~e~ 384 (385)
T TIGR02445 373 GLGQGIATVFER 384 (385)
T ss_pred ccChhheEEEEe
Confidence 333334566654
No 200
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=67.68 E-value=7 Score=37.98 Aligned_cols=42 Identities=26% Similarity=0.264 Sum_probs=29.1
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHhhh
Q 044260 436 FGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSA 477 (511)
Q Consensus 436 ~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~s~ 477 (511)
.|+-.+.|.|...+.+++.=.+++||+|+=+|-|+|+....+
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 455566777888888888777999999999999999875543
No 201
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=67.65 E-value=16 Score=38.58 Aligned_cols=40 Identities=18% Similarity=0.335 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 225 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~ 225 (511)
..|++++++++|++|+|||.+-.. +.+ ...-+..+.||+.
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 579999999999999999998654 322 2345567778773
No 202
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=66.26 E-value=34 Score=33.54 Aligned_cols=101 Identities=14% Similarity=0.229 Sum_probs=68.1
Q ss_pred ChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCc
Q 044260 134 SQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPS 213 (511)
Q Consensus 134 ~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps 213 (511)
+++|...++.+.++.|+.+++..-.... -+..++..-.++++.+....+++++++-| -|++|.+|... -+
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrstd--l~vL~l~~~~~~~~~~l~~~~~~a~~edg-----AeaIiLGCAGm---s~ 187 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRSTD--LPVLALEGPPEEAEALLVIEAAEALKEDG-----AEAIILGCAGM---SD 187 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeCC--CCcccccCChHHHHHHHHHHHHHHhhhcC-----CCEEEEcCccH---HH
Confidence 5667666677888888877765311110 01233333456778888888888877654 78899999764 35
Q ss_pred HHHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 214 LSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 214 ~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
++.+++..+|++ . +. |-..++.+|-.+++.+
T Consensus 188 la~~Lq~~~gvP----V--ID-----gv~Aav~~a~~L~~~~ 218 (230)
T COG4126 188 LADQLQKAFGVP----V--ID-----GVAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHhCCC----c--cc-----chHHHHHHHHHHHhhc
Confidence 689999999965 1 33 3566778888888765
No 203
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.03 E-value=10 Score=40.20 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=31.9
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
.+|++++|+++|++|+|||.+-.. +++..-.+.-...+.+.||-
T Consensus 279 ~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 279 ARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 589999999999999999998755 44433344444556666763
No 204
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=64.91 E-value=16 Score=38.26 Aligned_cols=45 Identities=9% Similarity=0.083 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
..+|++++|+++|++|+|||.+-.. |++..-.+.-...|.+-||-
T Consensus 208 ~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 208 AYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 3789999999999999999987644 54443345556777777774
No 205
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=64.59 E-value=27 Score=36.91 Aligned_cols=57 Identities=9% Similarity=-0.094 Sum_probs=37.7
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcc------------------cccchhhccccccccccchHHHHHHHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDR------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 453 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSasi~~~La~~~~ 453 (511)
.+|||.+-+|-.....--...+.||+.+. .+.+| --+--+||...++-...+.++..
T Consensus 274 ~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GhP~gatG~~~v~e~~~ 348 (385)
T PRK12578 274 PNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLF-GGLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred HHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCC-CCcccCCCCccHHHHHHHHHHHH
Confidence 58999999999988777778889998763 23211 11233788776665555555433
No 206
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=64.48 E-value=12 Score=39.75 Aligned_cols=44 Identities=16% Similarity=0.134 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LG 223 (511)
..+|++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|
T Consensus 276 ~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 276 IARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 4789999999999999999998755 5443333444455555555
No 207
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=64.39 E-value=8.6 Score=36.94 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTP 212 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~P 212 (511)
.+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 345577899999999999999999999998876554
No 208
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=64.02 E-value=14 Score=39.19 Aligned_cols=68 Identities=15% Similarity=0.177 Sum_probs=44.1
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC----------------ceEEEecC--------
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGN----------------IVSYNLGG-------- 235 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~~----------------~~~~dl~g-------- 235 (511)
..|++++++++|++|+|||++-++ +. +...-+..+.||+.+. -..+|.+|
T Consensus 263 ~~a~~~a~~~agl~~~did~~e~~d~f-----~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp 337 (389)
T PRK07516 263 RRAWQRALAQAGVTLDDLSFVETHDCF-----TIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHP 337 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCC-----CHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCC
Confidence 579999999999999999998655 32 2233455666776532 11455543
Q ss_pred CCchHHHHHHHHHHHHHh
Q 044260 236 MGCSAGLISIDLAKDLLQ 253 (511)
Q Consensus 236 ~gCsggl~al~lA~~lL~ 253 (511)
.||+|....+..+.+|..
T Consensus 338 ~gasG~~~~~e~~~QL~g 355 (389)
T PRK07516 338 IGATGVSMHVLAAMQLTG 355 (389)
T ss_pred ccHHHHHHHHHHHHHhcC
Confidence 245566666666666654
No 209
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=63.74 E-value=21 Score=38.17 Aligned_cols=44 Identities=11% Similarity=0.003 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
+.+|.+++|+++|+ |+|||.|... |++..-...-+..|.+.|+.
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 47899999999999 8999998755 54433334445667777774
No 210
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=62.95 E-value=26 Score=34.59 Aligned_cols=85 Identities=15% Similarity=0.183 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcH-HHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSL-SAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVH 255 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~-a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~ 255 (511)
......-++++|++++++++|||.+.+.-.|..-.|-. .+.+++-+.+=-+.+-..++ .|-|-+ ...+ ++...
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR-~iTgA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGR-EITGA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcc-eeccC
Confidence 34556677889999999999999998887776656633 34444444432245555666 576543 2222 22222
Q ss_pred CCCeEEEEEecc
Q 044260 256 PNSYALVISMEN 267 (511)
Q Consensus 256 ~~~~aLVVs~E~ 267 (511)
.+-.+|-||+-+
T Consensus 124 ~nPvvLYvSGGN 135 (336)
T KOG2708|consen 124 QNPVVLYVSGGN 135 (336)
T ss_pred CCCEEEEEeCCc
Confidence 356788888766
No 211
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=62.92 E-value=13 Score=39.48 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CCchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG--------MGCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g--------~gCsggl~al~lA~~lL 252 (511)
..+++++++++|++|+|||.+=++-. .+...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~----f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEA----FSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999875411 1223344566778742 2334443 14555555555555554
No 212
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=62.64 E-value=15 Score=38.86 Aligned_cols=45 Identities=9% Similarity=0.099 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
..+|++++|+++|++|+|||.+... +.+..-.+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 3689999999999999999998755 54433345555566777764
No 213
>PRK07855 lipid-transfer protein; Provisional
Probab=62.58 E-value=24 Score=37.47 Aligned_cols=24 Identities=29% Similarity=0.357 Sum_probs=21.4
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN 204 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~ 204 (511)
..|+++|++++|++|+|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998654
No 214
>PRK14878 UGMP family protein; Provisional
Probab=62.49 E-value=14 Score=38.18 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCC
Q 044260 172 ARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKL 224 (511)
Q Consensus 172 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~P-----s~a~~I~~~LGl 224 (511)
+|...+.+. .+.+++|+++|++++|||.+.++..|...+. +.|..++..++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 355555555 9999999999999999999999988764332 123445555554
No 215
>PRK08256 lipid-transfer protein; Provisional
Probab=62.30 E-value=22 Score=37.76 Aligned_cols=42 Identities=12% Similarity=0.228 Sum_probs=30.2
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
..|++++++++|++++|||.+-+.-. .+...-+..+.||+.+
T Consensus 267 ~~a~~~a~~~ag~~~~DiD~~ei~d~----f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 267 RAAAQQVYEQAGIGPEDIDVVELHDC----FSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEeeccC----CcHHHHHHHHHcCCCC
Confidence 57999999999999999999865511 1233345566777764
No 216
>PRK06059 lipid-transfer protein; Provisional
Probab=61.57 E-value=34 Score=36.38 Aligned_cols=42 Identities=21% Similarity=0.208 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
..|++++++++|++++|||++=+.-. | ....-...+.||+.+
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~-f---~~~~l~~~e~lGl~~ 317 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL-S---TALELDWYEHLGLCP 317 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc-C---hHHHHHHHHHcCCCC
Confidence 47899999999999999999865522 1 112233347777753
No 217
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=61.29 E-value=27 Score=37.33 Aligned_cols=55 Identities=11% Similarity=-0.072 Sum_probs=33.3
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCc--ccccchhhccccccccccchHHHHHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSD--RHMEPSRMTLYRFGNTSSSSLWYELAYS 451 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~--e~~~~S~~~l~r~GNtsSasi~~~La~~ 451 (511)
.+|||.+=+|-.-....-...+.||+.. .++.++ --+--+||...++=...+.++
T Consensus 313 ~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el 369 (401)
T PRK08131 313 LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTA 369 (401)
T ss_pred HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHH
Confidence 4799999998776555445678899853 344322 112247888755544444433
No 218
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=61.14 E-value=13 Score=37.37 Aligned_cols=38 Identities=21% Similarity=0.234 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCC
Q 044260 173 RKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPT 211 (511)
Q Consensus 173 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~ 211 (511)
|+..+.+ ...++++|+++|++++|||.+.++..|+..+
T Consensus 27 r~H~~~L-~~~i~~~l~~~~~~~~did~iavt~GPGsft 64 (268)
T PF00814_consen 27 RQHSENL-PPLIEELLKEAGISLSDIDAIAVTRGPGSFT 64 (268)
T ss_dssp HHHHHHH-HHHHHHHHHHHTS-GGGESEEEEEEESS-HH
T ss_pred HHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCccc
Confidence 4444444 5889999999999999999999999886544
No 219
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=60.85 E-value=23 Score=37.95 Aligned_cols=45 Identities=4% Similarity=-0.017 Sum_probs=32.3
Q ss_pred HHHHHHHHHHh-CCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAK-TSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~-agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
..+|++++|++ +|++|+|||.+-.. |.+..-.+.-...+.+-+|-
T Consensus 285 ~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 285 ARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 47899999999 99999999998755 54432233334456777764
No 220
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=60.78 E-value=20 Score=31.60 Aligned_cols=63 Identities=16% Similarity=0.113 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHcCCCCCceEEEecCCCchHH
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLF--NPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAG 241 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~--~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsgg 241 (511)
..+-..+-.++.+++++++++||--+++..++| ...| +..++++|.-.+++-++...|.=-|.
T Consensus 18 I~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~~V~gs 82 (117)
T cd02185 18 ILEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEMDVPGS 82 (117)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcCCCCCC
Confidence 333344555677789999999999999998765 4456 55666774434787777776554443
No 221
>PRK09604 UGMP family protein; Validated
Probab=60.59 E-value=32 Score=35.80 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKL 224 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~P-----s~a~~I~~~LGl 224 (511)
.+.....++++|+++|++++|||.+.++..|...+. +.|.-++..++.
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 345578899999999999999999999988764333 234445545544
No 222
>PRK06158 thiolase; Provisional
Probab=59.45 E-value=28 Score=36.88 Aligned_cols=40 Identities=15% Similarity=0.195 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 225 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~ 225 (511)
..|++++++++|++|+|||.+=+. |- +...-+..+.||+.
T Consensus 257 ~~aa~~A~~~AGi~p~DId~~ElyD~F-----s~~~l~~~E~lG~~ 297 (384)
T PRK06158 257 AESGPRAFAMAGLTPADIDVVELYDAF-----TINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEecCCc-----hHHHHHHHHHcCCC
Confidence 579999999999999999998644 32 22234445666664
No 223
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=59.43 E-value=31 Score=35.34 Aligned_cols=34 Identities=6% Similarity=-0.007 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCC
Q 044260 178 CVMFGALDELFAKTSLKPKDIGILIVNCSLFNPT 211 (511)
Q Consensus 178 ~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~ 211 (511)
+.....++++|+++|++++|||.+.++..|...+
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~t 83 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGG 83 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchh
Confidence 4456788999999999999999999998886443
No 224
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=58.72 E-value=27 Score=37.11 Aligned_cols=45 Identities=9% Similarity=0.131 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
...|++++|+++|++|+|||.+... +++..-...-...+.+-||.
T Consensus 281 ~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 281 QARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 3679999999999999999999866 44322223334455666654
No 225
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=58.34 E-value=18 Score=38.53 Aligned_cols=75 Identities=13% Similarity=0.173 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEE----EecCCCchHHHHHHHHHHHHHhc
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIVSY----NLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~~~~~~----dl~g~gCsggl~al~lA~~lL~~ 254 (511)
..+|.+++|+++|++|+|||.|... |++..-.+.-+..|.+-||-. +++.. .+....+++|+..+..+...|+.
T Consensus 272 ~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~ 350 (399)
T cd00832 272 LARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRD 350 (399)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhC
Confidence 4688999999999999999988755 444444455556677777743 22211 22223344555555455545554
Q ss_pred C
Q 044260 255 H 255 (511)
Q Consensus 255 ~ 255 (511)
+
T Consensus 351 ~ 351 (399)
T cd00832 351 G 351 (399)
T ss_pred C
Confidence 4
No 226
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=57.77 E-value=27 Score=37.83 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
..|++++++++|++|+|||++=++-. .+...-+..+.||+.+
T Consensus 312 ~~A~~~a~~~AGl~~~DiD~~Ei~da----Fa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 312 RAAAQKALSMAGVKPSDLQVAEVHDC----FTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHcCCCHHHCcEeeeccc----ChHHHHHHHHHcCCCC
Confidence 68999999999999999999866521 1233445567777764
No 227
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=57.61 E-value=24 Score=39.36 Aligned_cols=44 Identities=7% Similarity=0.114 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
.+|.+++|+++|++|+|||.|-.. |++..-.+.-...|.+-||-
T Consensus 408 ~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 408 ILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 689999999999999999988644 54432234445567777774
No 228
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=56.92 E-value=21 Score=38.49 Aligned_cols=25 Identities=20% Similarity=0.301 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN 204 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~ 204 (511)
...|++++|+++|++|+|||++=++
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 3689999999999999999998766
No 229
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.87 E-value=20 Score=38.64 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LG 223 (511)
.+|.+.||+++|++|+|||.+-.. |++..-...-+..|..-+|
T Consensus 279 ~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 279 IRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 699999999999999999999854 6665444555566666667
No 230
>PRK07937 lipid-transfer protein; Provisional
Probab=56.04 E-value=37 Score=35.66 Aligned_cols=78 Identities=10% Similarity=-0.017 Sum_probs=45.3
Q ss_pred HHHHHHHHHh-CCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC-------CchHHHHHHHHHHHHH
Q 044260 181 FGALDELFAK-TSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGM-------GCSAGLISIDLAKDLL 252 (511)
Q Consensus 181 ~~Aa~~aL~~-agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~-------gCsggl~al~lA~~lL 252 (511)
..++++++++ +|++|+|||++=+.- ..+...-+..+.||+..+ ..+|.+|- ||+|...-++++.+|.
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~ 323 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHh
Confidence 3444555555 599999999986541 123344567788998532 35666652 4444444455555554
Q ss_pred hcCCCCeEEEEE
Q 044260 253 QVHPNSYALVIS 264 (511)
Q Consensus 253 ~~~~~~~aLVVs 264 (511)
.. ..+++|+.+
T Consensus 324 g~-~a~~~l~~~ 334 (352)
T PRK07937 324 DG-SARRALAHA 334 (352)
T ss_pred cc-CCCEEEEec
Confidence 33 345666543
No 231
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.34 E-value=20 Score=38.07 Aligned_cols=44 Identities=14% Similarity=0.268 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LG 223 (511)
..+|++++|+++|++|+|||.+-.. +++..-.+.-...|.+-+|
T Consensus 256 ~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 256 AIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 4789999999999999999998755 5443333444445666666
No 232
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=54.98 E-value=34 Score=30.29 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCcHHHHHHHHc-CCCCCceEEEecC
Q 044260 175 EAECVMFGALDELFAKTSLKPKDIGILIVNCSLF--NPTPSLSAMVINHY-KLRGNIVSYNLGG 235 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~--~~~Ps~a~~I~~~L-Gl~~~~~~~dl~g 235 (511)
|..+-..+-.++.+++++++++||-.+++.+++| ...|+.+ ++++ |+. +++-+...-
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 17 EILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccCc
Confidence 3344445556677889999999999999998875 4567544 4445 776 677666554
No 233
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=54.60 E-value=40 Score=35.23 Aligned_cols=83 Identities=17% Similarity=0.095 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcH--HHHHHHHcCCCCCceEEEecCCCchHHHHHHHHHHHHHhcCC
Q 044260 179 VMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSL--SAMVINHYKLRGNIVSYNLGGMGCSAGLISIDLAKDLLQVHP 256 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~--a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~lA~~lL~~~~ 256 (511)
.+....+++|+++|++.+|||+|-+...|+- .|++ ....++.|.+.-+.+-+.++ -|-|=+.+-.+.... ..
T Consensus 53 ~i~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~~~---~~ 126 (342)
T COG0533 53 NIPPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLETGL---AF 126 (342)
T ss_pred HHHHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhccCC---CC
Confidence 4467889999999999999999998887763 2322 23334444433345677787 566665544433321 11
Q ss_pred CCeEEEEEecc
Q 044260 257 NSYALVISMEN 267 (511)
Q Consensus 257 ~~~aLVVs~E~ 267 (511)
.--+|+||+-.
T Consensus 127 p~v~LlVSGGH 137 (342)
T COG0533 127 PPVALLVSGGH 137 (342)
T ss_pred CcEEEEEecCc
Confidence 23577777655
No 234
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.27 E-value=29 Score=37.26 Aligned_cols=44 Identities=16% Similarity=0.168 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LG 223 (511)
..++++++|+++|++|+|||.+... +++....+.-...|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 4688999999999999999999865 4433333444445666665
No 235
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=53.86 E-value=42 Score=36.25 Aligned_cols=56 Identities=5% Similarity=-0.089 Sum_probs=31.8
Q ss_pred cccccEEEecCCchHHHHHHHHHcC-----------------CCcccccchhhccccccccccchHHHHHHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQ-----------------LSDRHMEPSRMTLYRFGNTSSSSLWYELAYSE 452 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSasi~~~La~~~ 452 (511)
.+|||.+-+|-.-....-...+.|| ++.+++.+|= -+--+||...++=...+.++.
T Consensus 328 ~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~G-G~la~GhP~gatG~~~v~e~~ 400 (430)
T TIGR02446 328 LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLG-GSIAYGHPFAATGARMITQTL 400 (430)
T ss_pred HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCC-CHHhcCCCccccHHHHHHHHH
Confidence 4799999999886555444455554 4444443221 123378887665544444433
No 236
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=53.38 E-value=22 Score=36.80 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC
Q 044260 172 ARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLF 208 (511)
Q Consensus 172 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~ 208 (511)
+|+.++.+... ++++|+++|++++|||.+.++..|.
T Consensus 42 ~~~H~~~l~~~-i~~~l~~~~~~~~did~Iavt~gPg 77 (322)
T TIGR03722 42 AEHHAEVAPKL-IKEALEEAGVSLEDIDAVAFSQGPG 77 (322)
T ss_pred HHHHHHHHHHH-HHHHHHHcCCCHHHCCEEEEecCCc
Confidence 34555555444 9999999999999999999998765
No 237
>PRK00768 nadE NAD synthetase; Reviewed
Probab=53.01 E-value=2.4e+02 Score=28.55 Aligned_cols=150 Identities=15% Similarity=0.164 Sum_probs=74.1
Q ss_pred HHHHHHHhcccCCCChhh-----HHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 044260 120 RQIFMERSGLTGTFSQEN-----LDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVMFGALDELFAKTSLK 194 (511)
Q Consensus 120 ~ee~~~~~~~~~~~~~~~-----~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~ 194 (511)
++++++.++-...++.+. .+|++.-++++|.+.--+--.+-. ++.+. ..-+.+++..-+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~VlGlSGGI----DSav~----------a~L~~~A~~~~~~~ 68 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSLVLGISGGQ----DSTLA----------GRLAQLAVEELRAE 68 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCH----HHHHH----------HHHHHHHHHHhccc
Confidence 456666555433344332 467777788888665432222211 22221 22233444433322
Q ss_pred CCCcCEEEEe-ecCCC--CCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHHH--------HHH-----------HH
Q 044260 195 PKDIGILIVN-CSLFN--PTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISIDL--------AKD-----------LL 252 (511)
Q Consensus 195 p~dID~LIv~-~s~~~--~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~l--------A~~-----------lL 252 (511)
-...+..+++ +.|.. .....+..+++.+|+. +...+||.. -..++...+.. |.+ +.
T Consensus 69 ~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~~-~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly~ 146 (268)
T PRK00768 69 TGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIKP-AVDASVAALEAAGIELSDFVKGNIKARERMIAQYA 146 (268)
T ss_pred ccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECHH-HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence 1111222222 44432 2345677899999984 367888883 66666554421 111 11
Q ss_pred hcCCCCeEEEEEeccCCCCCcCCCCcchhhhhcccccccEEE
Q 044260 253 QVHPNSYALVISMENITLNWYFGNERSMLVSNCLFRMGGAAI 294 (511)
Q Consensus 253 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~lv~~~lFgDGAaA~ 294 (511)
-++ ....||+++.+.|..+ -| -.+.+|||++.+
T Consensus 147 ~An-~~~~lvlgT~N~sE~~-~G-------y~TkyGD~~~d~ 179 (268)
T PRK00768 147 IAG-ATGGLVVGTDHAAEAV-TG-------FFTKFGDGGADI 179 (268)
T ss_pred HHc-cCCCEEEcCCcccHHH-hC-------ceeccCCccccc
Confidence 122 2356888877765411 11 125778888776
No 238
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=52.88 E-value=37 Score=35.59 Aligned_cols=49 Identities=14% Similarity=0.126 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLR 225 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~P-----s~a~~I~~~LGl~ 225 (511)
.+-.-++.+++|+++|.+|+|+|++-|...|+.+.+ +.|-.++.++..+
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 344568889999999999999999998888765443 3455566666543
No 239
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=52.62 E-value=49 Score=34.15 Aligned_cols=35 Identities=17% Similarity=0.071 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPT 211 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~ 211 (511)
.+.....++++|+++|++++|||.+.++..|...+
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsft 84 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIG 84 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHH
Confidence 34557888999999999999999999998887543
No 240
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=52.46 E-value=58 Score=34.53 Aligned_cols=42 Identities=10% Similarity=0.092 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 044260 180 MFGALDELFAKTSLK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~--p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
...|++++++++|++ ++|||++=+. |- +...-+..+.||+.+
T Consensus 257 ~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 257 GRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCCC
Confidence 357999999999997 6999987544 32 223344556666653
No 241
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.44 E-value=28 Score=37.29 Aligned_cols=45 Identities=9% Similarity=-0.044 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
..+|++++|+++|++|+|||.+-.. |.+..-.+.-+..|.+-||-
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~ 325 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGE 325 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcc
Confidence 3678999999999999999988654 55444445556667777763
No 242
>PLN03170 chalcone synthase; Provisional
Probab=52.41 E-value=54 Score=35.06 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----E-EecCCCchHHHHHHHH
Q 044260 174 KEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS-----Y-NLGGMGCSAGLISIDL 247 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsggl~al~l 247 (511)
+-+.....+.++++|+++|++++|||..++.-. -+.+-..+.++||++++-.. + +.++|+.++-+.+|+.
T Consensus 277 ~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~ 352 (401)
T PLN03170 277 GLISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDE 352 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHH
Confidence 345666677889999999999999998775432 34555678999999854321 2 3445555555566655
Q ss_pred HH
Q 044260 248 AK 249 (511)
Q Consensus 248 A~ 249 (511)
+.
T Consensus 353 ~~ 354 (401)
T PLN03170 353 MR 354 (401)
T ss_pred HH
Confidence 43
No 243
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=52.05 E-value=21 Score=31.70 Aligned_cols=83 Identities=16% Similarity=0.105 Sum_probs=48.4
Q ss_pred cccccEEEecCCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeeChHHHH
Q 044260 396 KLAFEHFCIHAGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQ-IAFGSGFKC 474 (511)
Q Consensus 396 ~~did~~~~H~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~Vll-iafGsG~~~ 474 (511)
.+|||.|=+|-.-....-...+.||++++++.++=-.+. +||...+|=...+.++..+=+-+.|++.+. +..|.|..
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g- 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQG- 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEE-
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHhcccceee-
Confidence 589999999999998888899999999999865433333 788766654443333332211134566443 44444432
Q ss_pred hhhheE
Q 044260 475 NSAVWK 480 (511)
Q Consensus 475 ~s~v~r 480 (511)
.+++++
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 334443
No 244
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=50.56 E-value=68 Score=34.63 Aligned_cols=41 Identities=12% Similarity=0.119 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 044260 181 FGALDELFAKTSLK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 181 ~~Aa~~aL~~agi~--p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
..|+++|++++|++ ++|||++=+. |- +...-+..+.||+.+
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~D~F-----a~~~l~~lE~lGl~~ 339 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELHDAY-----TSSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEeecCC-----cHHHHHHHHHcCCCC
Confidence 57999999999997 7999998655 32 122334456666653
No 245
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=50.21 E-value=65 Score=34.34 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
...|+++|++++|++|+|||++-+. +- +...-+..+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~f-----a~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDCF-----TPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeeccc-----hHHHHHHHHHcCCCC
Confidence 3579999999999999999998755 32 233455667788753
No 246
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=49.71 E-value=34 Score=36.11 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC----CceE----EEecCCCchHHHHHHHHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG----NIVS----YNLGGMGCSAGLISIDLAKD 250 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~----~~~~----~dl~g~gCsggl~al~lA~~ 250 (511)
..+|++++|+++|++++|||.+... +++..-.+.-...|.+-|+-.. .+.. -.+.....++++..+-.+..
T Consensus 281 ~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~ 360 (421)
T cd00833 281 QAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVL 360 (421)
T ss_pred HHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHH
Confidence 4689999999999999999999866 4432222333344555554321 1111 11333334455555555555
Q ss_pred HHhcC
Q 044260 251 LLQVH 255 (511)
Q Consensus 251 lL~~~ 255 (511)
.++.+
T Consensus 361 ~l~~~ 365 (421)
T cd00833 361 ALEHG 365 (421)
T ss_pred HHhcC
Confidence 55554
No 247
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=49.41 E-value=43 Score=35.47 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=57.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC--------cHHHHHHHHcCCC--CCceEEEecCC
Q 044260 167 PCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTP--------SLSAMVINHYKLR--GNIVSYNLGGM 236 (511)
Q Consensus 167 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~P--------s~a~~I~~~LGl~--~~~~~~dl~g~ 236 (511)
.++.+...+...+..+|++++++++|+++++||+|=....+-+..| +..+.|+++.|++ .|-++-|+.-.
T Consensus 60 ~~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~G 139 (365)
T PRK09585 60 ERLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAG 139 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcC
Confidence 3566667778888999999999999999999998876654433333 2467888888876 23345555543
Q ss_pred CchHHHHHHHHHHHHHhcCC
Q 044260 237 GCSAGLISIDLAKDLLQVHP 256 (511)
Q Consensus 237 gCsggl~al~lA~~lL~~~~ 256 (511)
|=.+-+..+- ..+|-.++
T Consensus 140 GqGAPLvp~~--~~~Lf~~~ 157 (365)
T PRK09585 140 GQGAPLVPAF--HQALFGHP 157 (365)
T ss_pred CCCCCchHHH--HHHHhcCC
Confidence 4444454433 33444444
No 248
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.33 E-value=27 Score=37.33 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=33.7
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LG 223 (511)
.++++++|+++|++|+|||.+... |++..-.+.-+..|.+-||
T Consensus 278 ~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 278 QIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 689999999999999999998754 5554334555667888887
No 249
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=48.99 E-value=29 Score=38.43 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCC
Q 044260 172 ARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFN 209 (511)
Q Consensus 172 ~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~ 209 (511)
.+..++.+. .+++++|+++|++++|||.|.|+..|..
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~ 81 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL 81 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc
Confidence 455566555 9999999999999999999999887764
No 250
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=46.31 E-value=39 Score=36.29 Aligned_cols=45 Identities=13% Similarity=0.003 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
..++.+++|+++|++|+|||.+-.. |++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 3689999999999999999998644 55433345556777888874
No 251
>PLN03173 chalcone synthase; Provisional
Probab=46.15 E-value=72 Score=34.03 Aligned_cols=52 Identities=13% Similarity=0.053 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc
Q 044260 173 RKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI 228 (511)
Q Consensus 173 ~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~ 228 (511)
.+.+...+-+.++++|+++|++++|||..++.-. -+..-..++++||++++-
T Consensus 272 p~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ek 323 (391)
T PLN03173 272 PGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEK 323 (391)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHH
Confidence 3446667778889999999999999999775432 245567799999998553
No 252
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.48 E-value=49 Score=35.33 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LG 223 (511)
..+|++++|+++|++|+|||.+-.. |.+..-.+.-...+.+.||
T Consensus 290 ~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 290 ARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 3789999999999999999998754 5443333444566777777
No 253
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=44.97 E-value=1e+02 Score=30.49 Aligned_cols=68 Identities=12% Similarity=0.126 Sum_probs=42.2
Q ss_pred cccccEEEec----CCchHHHHHHHHHcCCCcccccchhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeeC
Q 044260 396 KLAFEHFCIH----AGGRAVLDELEKNLQLSDRHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFG 469 (511)
Q Consensus 396 ~~did~~~~H----~~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafG 469 (511)
.+||+|++.- ...+.+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.++.+. .||.+|++++.=
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 6899999952 234455567999999998644 5666667766666655333343333 589999998764
No 254
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=44.43 E-value=94 Score=33.52 Aligned_cols=44 Identities=9% Similarity=0.110 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 223 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LG 223 (511)
..+|++++|+++|++|+|||.+-.. +.+..-.+.-...+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 3678999999999999999998755 4432223333344555554
No 255
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=43.92 E-value=75 Score=33.83 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=27.7
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl 224 (511)
..|++++++++|++|+|||.+=+. |- +...-+..+.||+
T Consensus 258 ~~aa~~a~~~AGi~~~did~~elyD~F-----s~~~~~~~E~lGl 297 (388)
T PRK08142 258 AWSGPAAFAEAGVTPADIKYASIYDSF-----TITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccc-----hHHHHHHHHHcCC
Confidence 579999999999999999977544 31 2223444566666
No 256
>PLN03171 chalcone synthase-like protein; Provisional
Probab=42.89 E-value=80 Score=33.72 Aligned_cols=71 Identities=8% Similarity=0.062 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHh---------CCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE------EEecCCCc
Q 044260 174 KEAECVMFGALDELFAK---------TSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS------YNLGGMGC 238 (511)
Q Consensus 174 ~ea~~l~~~Aa~~aL~~---------agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~------~dl~g~gC 238 (511)
++...++.+++++++++ .|++++||+.+++ +. .+.+-..+.++||++++-.. -+.+++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H---q~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH---PG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc---CC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 45556666666666665 5888999987641 11 23566779999999754321 24555566
Q ss_pred hHHHHHHHHHH
Q 044260 239 SAGLISIDLAK 249 (511)
Q Consensus 239 sggl~al~lA~ 249 (511)
++-..+|+.+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66666776553
No 257
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=42.22 E-value=1.2e+02 Score=32.27 Aligned_cols=41 Identities=10% Similarity=0.201 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 044260 181 FGALDELFAKTSLK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 181 ~~Aa~~aL~~agi~--p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
..|++++++++|++ ++|||++=+. +- ....-+..+.||+.+
T Consensus 269 ~~aa~~a~~~AGl~~~~~Did~~Ei~D~F-----s~~~l~~~e~lGl~~ 312 (398)
T PRK06157 269 RIAARKAYREAGITDPREELSMAEVHDCF-----SITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHcCCCCchhcCCEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 57999999999998 7999998654 31 223345566777654
No 258
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=41.07 E-value=1.1e+02 Score=32.72 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC
Q 044260 181 FGALDELFAKTSLK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 226 (511)
Q Consensus 181 ~~Aa~~aL~~agi~--p~dID~LIv~-~s~~~~~Ps~a~~I~~~LGl~~ 226 (511)
..|++++++++|++ ++|||.+-++ +- +...-+..+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~F-----t~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDRY-----SYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecCC-----hHHHHHHHHHcCCCC
Confidence 36999999999997 6999998766 31 222344556677653
No 259
>PRK08304 stage V sporulation protein AD; Validated
Probab=40.69 E-value=1.1e+02 Score=32.07 Aligned_cols=89 Identities=17% Similarity=0.227 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC--C---C--ceEEEec---------CCCchHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR--G---N--IVSYNLG---------GMGCSAGLI 243 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~--~---~--~~~~dl~---------g~gCsggl~ 243 (511)
++..+.+=|+++|.+|+|-|++|.+--. ..--.+...+..+-|+. . | +.-||.. |-|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGDlg-~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGDLG-RVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcchH-HHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 4566667788999999999999866211 11123344444444542 1 1 3566632 336777666
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC-CC
Q 044260 244 SIDLAKDLLQVHPNSYALVISMENI-TL 270 (511)
Q Consensus 244 al~lA~~lL~~~~~~~aLVVs~E~~-s~ 270 (511)
.=.+-+. |+.+..+++|+|+|-.+ |+
T Consensus 289 ~~~~~~~-~~~g~~~rvl~v~tGaLls~ 315 (337)
T PRK08304 289 YGYLLKE-LQKGKLKRVLVVATGALLSP 315 (337)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhhcCc
Confidence 5555444 45677899999998774 44
No 260
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=39.75 E-value=59 Score=34.18 Aligned_cols=30 Identities=13% Similarity=0.268 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeecCC
Q 044260 179 VMFGALDELFAKTSLKPKDIGILIVNCSLF 208 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p~dID~LIv~~s~~ 208 (511)
.....++++|+++|++++|||.+.++..|.
T Consensus 52 ~l~~~i~~~l~~a~~~~~did~Iavt~GPG 81 (345)
T PTZ00340 52 HILSLVKEALEEAKITPSDISLICYTKGPG 81 (345)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 346778999999999999999999988876
No 261
>PRK12404 stage V sporulation protein AD; Provisional
Probab=39.56 E-value=1.2e+02 Score=31.55 Aligned_cols=89 Identities=10% Similarity=0.184 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC------C--ceEEEe--------cCCCchHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG------N--IVSYNL--------GGMGCSAGLI 243 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~------~--~~~~dl--------~g~gCsggl~ 243 (511)
++..+.+=|+++|.+|+|-|++|.+-- ...--.+...+..+-|+.- | +.-||- +|-|||+.+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGDL-g~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGDL-GHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcch-HHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 456667778899999999999986621 1111233444555545421 1 234443 2346766665
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC-CC
Q 044260 244 SIDLAKDLLQVHPNSYALVISMENI-TL 270 (511)
Q Consensus 244 al~lA~~lL~~~~~~~aLVVs~E~~-s~ 270 (511)
.=.+-+. |+.+..+++|+|++-.+ |+
T Consensus 287 ~g~~~~~-~~~g~~~rvL~v~TGALlS~ 313 (334)
T PRK12404 287 YGHLLNR-MKRGELKRILVVATGALLSP 313 (334)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhhcCc
Confidence 5444444 45677899999998774 44
No 262
>PRK13410 molecular chaperone DnaK; Provisional
Probab=37.36 E-value=90 Score=35.81 Aligned_cols=67 Identities=13% Similarity=0.114 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHH
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISID 246 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 246 (511)
..+-....++++|+++|+++++||.|+..... ..+|.+-.+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 34445666889999999999999999876432 24788999999999854 233445434544444443
No 263
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=36.35 E-value=1.5e+02 Score=31.46 Aligned_cols=95 Identities=18% Similarity=0.175 Sum_probs=52.5
Q ss_pred ChhhHHHHHHHHHHhCCCcEEeecCcccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEE--EEeec--CCC
Q 044260 134 SQENLDFQRKILERSGLGESTYLPEAVLRVPPNPCMAEARKEAECVMFGALDELFAKTSLKPKDIGIL--IVNCS--LFN 209 (511)
Q Consensus 134 ~~~~~~f~~ri~~~sGi~~r~~~~~~~~~~~~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~L--Iv~~s--~~~ 209 (511)
+++.++.+..+.++.|.++-+..+.....++.-..=. .+++.+.|++.|+....-+.. +++|. +.+
T Consensus 269 ~~~~l~~la~ia~~~g~~~irlT~~Q~l~i~~i~~~~----------~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~C 338 (390)
T TIGR02435 269 TAAQLRGLAQLAQALGDGDLRLTPWRALLVLGLPPER----------ADAAQRALAALGLVTSASDPRARIIACTGAPGC 338 (390)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCcceEEcCCCHHH----------HHHHHHHHHHCCCCcCCCCCeeeEEECCCcccc
Confidence 4444444455777788777666654322222111111 456667777888865443333 45553 222
Q ss_pred -----CCCcHHHHHHHHcCCCCCceEEEecCCCchHH
Q 044260 210 -----PTPSLSAMVINHYKLRGNIVSYNLGGMGCSAG 241 (511)
Q Consensus 210 -----~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsgg 241 (511)
.+-.++..|.+.++.... ..+.++ ||..+
T Consensus 339 ~~~~~~t~~~a~~l~~~~~~~~~-~~i~vS--GC~n~ 372 (390)
T TIGR02435 339 ASALADTRADAEALAAYCEPTAP-ITVHLS--GCAKG 372 (390)
T ss_pred ccchhhHHHHHHHHHHHhcccCC-cEEEEe--CCccc
Confidence 344567788888875432 566666 78754
No 264
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=36.05 E-value=34 Score=34.53 Aligned_cols=28 Identities=29% Similarity=0.387 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVN 204 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~ 204 (511)
-+|...|++++++++|++|.||+.+=..
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEee
Confidence 4677899999999999999999988654
No 265
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=35.95 E-value=93 Score=32.27 Aligned_cols=69 Identities=14% Similarity=0.185 Sum_probs=41.6
Q ss_pred HHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-------ceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 182 GALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-------IVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 182 ~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
-|+..+|+++|++.+|||+.=.|-. .-|-+.+-.++||+.++ +.++.-- .||+|.=.-.-+-+.|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINEA----FAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINEA----FASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhHH----HHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 4778899999999999997654421 12334456788888632 2333333 4677655444444444333
Q ss_pred C
Q 044260 255 H 255 (511)
Q Consensus 255 ~ 255 (511)
+
T Consensus 399 g 399 (435)
T KOG1389|consen 399 G 399 (435)
T ss_pred c
Confidence 3
No 266
>PLN03172 chalcone synthase family protein; Provisional
Probab=35.87 E-value=1.1e+02 Score=32.54 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----E-EecCCCchHHHHHHHHH
Q 044260 175 EAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVS-----Y-NLGGMGCSAGLISIDLA 248 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~-----~-dl~g~gCsggl~al~lA 248 (511)
.+...+.+.++++|+++|++..|||..++.-. -+..-..|+++||++++-.. + +.++|+.++-+.+|+.+
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqg----g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAHPG----GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEecCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 35556667778899999999999998765432 24556779999999854332 2 34445555555666544
No 267
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=34.33 E-value=44 Score=34.44 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=50.9
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-------ceEEEec---
Q 044260 165 PNPCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-------IVSYNLG--- 234 (511)
Q Consensus 165 ~~~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~-------~~~~dl~--- 234 (511)
.+.+|..| +..-++..+.+=|+++|.+|+|-|++|.+--. ..--.+...+.++-|+.-. +.-||..
T Consensus 193 D~~nMGaA---MAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg-~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qd 268 (329)
T PF07451_consen 193 DPNNMGAA---MAPAAADTIEQHFKDTGRSPDDYDLIVTGDLG-KVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQD 268 (329)
T ss_dssp -TT-HHHH---HHHHHHHHHHHHHHHCT--GGG-SEEEESS-H-HHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S-
T ss_pred Ccccchhh---HhHHHHHHHHHHHHHhCCChhhcCeEEecchH-HHHHHHHHHHHHHcCCCCccccccCCeEeecCCccc
Confidence 34566532 22234556667788999999999999966210 0011344555566665311 1223333
Q ss_pred ------CCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccC
Q 044260 235 ------GMGCSAGLISIDLAKDLLQVHPNSYALVISMENI 268 (511)
Q Consensus 235 ------g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~ 268 (511)
|-|||+.+..=.+-+. |+.+..+++|+|++-.+
T Consensus 269 v~aGGSGcgCSA~V~~g~ll~~-l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 269 VHAGGSGCGCSAVVLCGYLLPK-LRKGELKRVLFVATGAL 307 (329)
T ss_dssp -TT-EESHHHHHHHHHHCHHHH-HHTTS-SEEEEEEEEE-
T ss_pred cccCCCCcchHHHHHHHHHHHH-HHcCCceEEEEEEchhh
Confidence 3456666655444444 45677899999998764
No 268
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=32.49 E-value=81 Score=33.32 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=49.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC----------cHHHHHHHHcCCCC--CceEEEec
Q 044260 167 PCMAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTP----------SLSAMVINHYKLRG--NIVSYNLG 234 (511)
Q Consensus 167 ~~ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~P----------s~a~~I~~~LGl~~--~~~~~dl~ 234 (511)
..+++.+++-..+-+.|+..++++.++.|+||+.+.+...+..+.| ....+|+++.|++. |.++=|+.
T Consensus 62 ~~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 62 AELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 4566777788889999999999999999999997665533322222 34688999999872 23344554
No 269
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=31.97 E-value=1.8e+02 Score=30.43 Aligned_cols=89 Identities=12% Similarity=0.186 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC--C---C--ceEEEe--------cCCCchHHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR--G---N--IVSYNL--------GGMGCSAGLIS 244 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~--~---~--~~~~dl--------~g~gCsggl~a 244 (511)
++..+.+=|+++|.+|+|-|++|.+-- ...--.+...+..+-|+. . | ..-||- +|-|||+.+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgdl-g~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGDL-ARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecch-HHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 456667778899999999999986621 111112334444444442 1 1 234433 23466666655
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccC-CC
Q 044260 245 IDLAKDLLQVHPNSYALVISMENI-TL 270 (511)
Q Consensus 245 l~lA~~lL~~~~~~~aLVVs~E~~-s~ 270 (511)
=.+-+. |+.+..+++|+|+|-.+ |+
T Consensus 283 ~~~~~~-~~~g~~~r~l~v~tgalls~ 308 (327)
T TIGR02845 283 GHILKE-MLRGKLKKVLVVATGALLSP 308 (327)
T ss_pred HHHHHH-HhcCcceEEEEEEchhhcCc
Confidence 444444 44577899999998774 44
No 270
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=31.83 E-value=1.2e+02 Score=34.39 Aligned_cols=66 Identities=8% Similarity=0.001 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHH
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISI 245 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al 245 (511)
..+=....++++|+++|++++|||.|+..... ...|.+..+|.+.+|... . .+++..-|.+.-.|+
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi 372 (616)
T PRK05183 307 LVKRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAI 372 (616)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHH
Confidence 33345566789999999999999999976422 237889999999998652 2 245543444433333
No 271
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=31.03 E-value=38 Score=29.95 Aligned_cols=52 Identities=17% Similarity=0.220 Sum_probs=33.5
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEe-eChHHHHhhhheEEecccC-CCC----CCCCccccccc
Q 044260 442 SSLWYELAYSEAKGRIKRGDRTWQIA-FGSGFKCNSAVWKALRTIN-PAK----EKNPWMDEIHQ 500 (511)
Q Consensus 442 asi~~~La~~~~~g~l~~Gd~Vllia-fGsG~~~~s~v~r~~~~~~-~~~----~~~~w~~~~~~ 500 (511)
|.++++=+++.+- .++.||+|.+-+ || .+|+++-.+-. .+. ..+||++++-+
T Consensus 31 a~~~inp~D~~~L-gv~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi~ 88 (128)
T COG1153 31 AVCEINPEDMKQL-GVSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVID 88 (128)
T ss_pred eEEEECHHHHHHh-CCCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceeeC
Confidence 4445555555554 468999999987 87 57777765421 111 16899998743
No 272
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=30.80 E-value=2.2e+02 Score=32.21 Aligned_cols=49 Identities=8% Similarity=0.062 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 225 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~ 225 (511)
..+=..+.++++|+++|++++|||.|+..... ...|.+-.+|.+.+|..
T Consensus 291 ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 291 LVQKTLSICRRALRDAGLSVEEIKGVVLVGGS-TRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEECCc-CCChHHHHHHHHHhCCC
Confidence 33345567789999999999999999866321 24789999999999864
No 273
>PLN03184 chloroplast Hsp70; Provisional
Probab=30.45 E-value=1.3e+02 Score=34.42 Aligned_cols=66 Identities=12% Similarity=0.026 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHH
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISID 246 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 246 (511)
.+-....++++|++++++++|||.|+..... ..+|.+-.+|.+.+|.. ....++..-|.+.-.|+.
T Consensus 345 ~~r~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 345 LDRCKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 3344556788999999999999999977422 23799999999999864 234455444444444443
No 274
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=30.12 E-value=55 Score=31.88 Aligned_cols=38 Identities=32% Similarity=0.351 Sum_probs=28.3
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHHHh
Q 044260 436 FGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCN 475 (511)
Q Consensus 436 ~GNtsSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~~~ 475 (511)
+|-|-|. +...+.+.+.=.+++||+|+=||-|+||..+
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 4555444 5566666666678999999999999998754
No 275
>CHL00094 dnaK heat shock protein 70
Probab=29.93 E-value=1.3e+02 Score=34.05 Aligned_cols=45 Identities=11% Similarity=0.171 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 225 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~ 225 (511)
....++++|+++|+++++||.|+..... ...|.+-.++.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3455789999999999999999976432 34799999999999854
No 276
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=29.90 E-value=1.1e+02 Score=32.63 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=21.4
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe
Q 044260 181 FGALDELFAKTSLKPKDIGILIVN 204 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~ 204 (511)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 589999999999999999988754
No 277
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=29.82 E-value=1.1e+02 Score=34.24 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHH
Q 044260 175 EAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISID 246 (511)
Q Consensus 175 ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 246 (511)
+..+-....++++|+++|+++++||.|++.... ...|.+-..|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 302 ~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 302 DLVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 334445666789999999999999999976432 23799999999999843 223444334444444443
No 278
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=29.30 E-value=1.5e+02 Score=33.70 Aligned_cols=67 Identities=12% Similarity=0.070 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHH
Q 044260 176 AECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISID 246 (511)
Q Consensus 176 a~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 246 (511)
..+-....++++|+++|+++++||.|+..... ...|.+-.+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 305 l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 305 LVERTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 33345566789999999999999999876422 237999999999998642 23444445555444443
No 279
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=28.07 E-value=2.3e+02 Score=29.19 Aligned_cols=110 Identities=11% Similarity=0.089 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhCCCCCCC-cCEEEEe-ecCCCCCCcHHHHHHHHcC--CCCCceEEEecCCCchHHHHHHHHHHHHHhc
Q 044260 179 VMFGALDELFAKTSLKPKD-IGILIVN-CSLFNPTPSLSAMVINHYK--LRGNIVSYNLGGMGCSAGLISIDLAKDLLQV 254 (511)
Q Consensus 179 l~~~Aa~~aL~~agi~p~d-ID~LIv~-~s~~~~~Ps~a~~I~~~LG--l~~~~~~~dl~g~gCsggl~al~lA~~lL~~ 254 (511)
-...++++|++|+|+++++ +..|.+. +..+. |+.-..+.+.+. .+..+..|-+.. +....+...
T Consensus 48 rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~--e~~~~~lv~~~R~~fps~ae~~~v~s----------Da~~sl~a~ 115 (336)
T KOG1794|consen 48 RIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQ--EDKNRKLVTEFRDKFPSVAENFYVTS----------DADGSLAAA 115 (336)
T ss_pred HHHHHHHHHHhhcCCCccCccceeeeecccCCc--hhHHHHHHHHHHHhccchhheeeeeh----------hHHHHHhhc
Confidence 3467788899999999999 8888877 33443 333344444432 222355666664 111122222
Q ss_pred ---CCCCeEEEEEeccCCCCCc-CCCCcchhhhhcccccccEEEEEeccC
Q 044260 255 ---HPNSYALVISMENITLNWY-FGNERSMLVSNCLFRMGGAAILLSNKR 300 (511)
Q Consensus 255 ---~~~~~aLVVs~E~~s~~~~-~~~dr~~lv~~~lFgDGAaA~lLs~~~ 300 (511)
+.+..||+-++....+-.. +|....--......|||+.|.-+++..
T Consensus 116 t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 116 TPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred CCCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 2357888888887655221 232221111235779999998887644
No 280
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=27.99 E-value=1.8e+02 Score=33.32 Aligned_cols=62 Identities=8% Similarity=0.025 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISID 246 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~-s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 246 (511)
....++++|+++|++++|||.||... ++ .+|.+-.+|.+.+|..+ . .+++-.-|.+.-.|+.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGss--riP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGMT--RMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCcc--cChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHHH
Confidence 44567889999999999999998764 33 47999999999998642 2 3455444544444443
No 281
>PRK13411 molecular chaperone DnaK; Provisional
Probab=26.80 E-value=1.4e+02 Score=34.06 Aligned_cols=47 Identities=15% Similarity=0.264 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCC
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl 224 (511)
.+-..+.++++|+++|+++++||.|+..... ...|.+-.+|.+.+|-
T Consensus 307 ~~~~~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~f~~ 353 (653)
T PRK13411 307 VEATIEPMQQALKDAGLKPEDIDRVILVGGS-TRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCcchHHHHHHHHcCC
Confidence 3334567789999999999999988866321 2478999999999974
No 282
>PF04241 DUF423: Protein of unknown function (DUF423); InterPro: IPR006696 This is a potential integral membrane protein with no known function.
Probab=26.42 E-value=3.4e+02 Score=22.50 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=22.0
Q ss_pred CCCcccccccchhhhhHHHHHHHHHHHHHHHHH
Q 044260 19 LPDFKQSVKLKYVKLGYHYVITHGMYLFLSPLV 51 (511)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 51 (511)
|.+-......+....+-+|.+-|.+.++.++++
T Consensus 10 l~~~~~~~~~~~~~tA~~y~~~Halall~~~~~ 42 (89)
T PF04241_consen 10 LKDQLSPEQLEWFQTAVQYQFIHALALLALGLL 42 (89)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333345566788889998898887777643
No 283
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=25.00 E-value=1.8e+02 Score=33.27 Aligned_cols=64 Identities=3% Similarity=0.152 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCCchHHHHHHH
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGGMGCSAGLISID 246 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g~gCsggl~al~ 246 (511)
....++++|+++++++++||.|+..... ...|.+-.+|.+.+|-.. ...+++..-|.+.-.|+.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~ 378 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGS-TRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQ 378 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCC-CCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhh
Confidence 3456889999999999999999876421 247899999999997431 233444434444444444
No 284
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.69 E-value=84 Score=33.20 Aligned_cols=45 Identities=13% Similarity=0.109 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEE-EeecCCCCCCcHHHHHHHHcCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILI-VNCSLFNPTPSLSAMVINHYKL 224 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LI-v~~s~~~~~Ps~a~~I~~~LGl 224 (511)
+..|.+++|+++|+.|+|||.|= ++||+..-.-.-+..|.+-|+-
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 48899999999999999999886 4466432122233445555653
No 285
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=24.06 E-value=1.3e+02 Score=34.38 Aligned_cols=45 Identities=11% Similarity=0.215 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 044260 180 MFGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 225 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~ 225 (511)
....++++|+++|+++++||.|+..... ...|.+-.+|.+.+|..
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGM-TRMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 3556789999999999999999976421 24789999999999864
No 286
>PRK08329 threonine synthase; Validated
Probab=23.88 E-value=68 Score=33.52 Aligned_cols=34 Identities=24% Similarity=0.202 Sum_probs=29.7
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEeeChHHH
Q 044260 440 SSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFK 473 (511)
Q Consensus 440 sSasi~~~La~~~~~g~l~~Gd~VlliafGsG~~ 473 (511)
+|+..+..+..+.++|.+++|++|+++--|+|+|
T Consensus 312 ssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 312 TSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred cHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 4677788888888899999999999999999976
No 287
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=23.18 E-value=1e+02 Score=31.07 Aligned_cols=49 Identities=31% Similarity=0.392 Sum_probs=31.6
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 044260 181 FGALDELFAKTSLKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIVSYNLGG 235 (511)
Q Consensus 181 ~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~~~~~~~dl~g 235 (511)
+.|++.+|+++|++.+|||++=+|-. ..|. .-.+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 46778888888888888888777632 1121 23466677774 55666665
No 288
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=22.27 E-value=94 Score=32.92 Aligned_cols=74 Identities=18% Similarity=0.282 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCC-----C-----cHHHHHHHHcCCC--CCceEEEecCC
Q 044260 169 MAEARKEAECVMFGALDELFAKTSLKPKDIGILIVNCSLFNPT-----P-----SLSAMVINHYKLR--GNIVSYNLGGM 236 (511)
Q Consensus 169 ma~~~~ea~~l~~~Aa~~aL~~agi~p~dID~LIv~~s~~~~~-----P-----s~a~~I~~~LGl~--~~~~~~dl~g~ 236 (511)
+.+...+..++..+|++++++++++++++||++=....+-+.. | +..+.|+++.|++ .|-+.-|+.-.
T Consensus 59 ~~~l~~~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~vV~DFR~~Dia~G 138 (364)
T PF03702_consen 59 LCELDRELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGITVVSDFRSADIAAG 138 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-EEE--CHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcCEEeechHHHHhcc
Confidence 4445566677889999999999999999999986554322212 2 2478899999986 12234455532
Q ss_pred CchHHH
Q 044260 237 GCSAGL 242 (511)
Q Consensus 237 gCsggl 242 (511)
|=.+-+
T Consensus 139 GqGAPL 144 (364)
T PF03702_consen 139 GQGAPL 144 (364)
T ss_dssp S-S---
T ss_pred CCCCCc
Confidence 333333
No 289
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=20.91 E-value=59 Score=39.48 Aligned_cols=125 Identities=19% Similarity=0.201 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCE----EEEeec-CC-----CCCC----------cHHHHHHHHcCC--CCCceEEEec
Q 044260 177 ECVMFGALDELFAKTSLKPKDIGI----LIVNCS-LF-----NPTP----------SLSAMVINHYKL--RGNIVSYNLG 234 (511)
Q Consensus 177 ~~l~~~Aa~~aL~~agi~p~dID~----LIv~~s-~~-----~~~P----------s~a~~I~~~LGl--~~~~~~~dl~ 234 (511)
..|..+|.-+|+-++||+|.++.. +.+.|+ +. ...| -.-+|.+||+.. .-.-++|.+.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 457789999999999999987642 344443 11 1111 123566666542 1124677777
Q ss_pred CCCchHHHHHHHHHHHHHhcCCCCeEEEEEeccCCC-C----CcC-------CCCc--chhhhhcccccccEEEEEeccC
Q 044260 235 GMGCSAGLISIDLAKDLLQVHPNSYALVISMENITL-N----WYF-------GNER--SMLVSNCLFRMGGAAILLSNKR 300 (511)
Q Consensus 235 g~gCsggl~al~lA~~lL~~~~~~~aLVVs~E~~s~-~----~~~-------~~dr--~~lv~~~lFgDGAaA~lLs~~~ 300 (511)
.+|++.+.++..|.+-++.+...+|+|-++-.+-. + |.+ |.-+ +.--....=.||.+|++|.++.
T Consensus 168 -tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~ 246 (2376)
T KOG1202|consen 168 -TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKS 246 (2376)
T ss_pred -hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhH
Confidence 59999999999999999999999999988776432 1 111 1111 0100123346999999999877
Q ss_pred Cc
Q 044260 301 SD 302 (511)
Q Consensus 301 ~~ 302 (511)
..
T Consensus 247 ~A 248 (2376)
T KOG1202|consen 247 LA 248 (2376)
T ss_pred HH
Confidence 54
No 290
>PLN02854 3-ketoacyl-CoA synthase
Probab=20.44 E-value=4.5e+02 Score=29.30 Aligned_cols=42 Identities=10% Similarity=0.176 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCC------CCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 044260 180 MFGALDELFAKTSLKP------KDIGILIVNCSLFNPTPSLSAMVINHYKLR 225 (511)
Q Consensus 180 ~~~Aa~~aL~~agi~p------~dID~LIv~~s~~~~~Ps~a~~I~~~LGl~ 225 (511)
+...+++.|.++|+++ +|||+.+.... ....-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5678899999999997 68988775432 124456789999996
Done!