Query 044262
Match_columns 399
No_of_seqs 388 out of 3336
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 12:58:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044262.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044262hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF01657 Stress-antifung: Salt 99.9 6.5E-25 1.4E-29 172.8 8.7 100 12-114 2-106 (106)
2 PF01657 Stress-antifung: Salt 99.8 5.8E-21 1.3E-25 150.3 8.4 93 133-228 14-106 (106)
3 KOG1187 Serine/threonine prote 99.6 5.1E-16 1.1E-20 148.4 10.1 92 308-399 61-153 (361)
4 KOG1026 Nerve growth factor re 99.5 2.6E-14 5.6E-19 143.3 9.5 85 315-399 479-570 (774)
5 KOG3653 Transforming growth fa 99.5 1.8E-13 3.9E-18 128.7 9.1 75 321-399 209-289 (534)
6 KOG1094 Discoidin domain recep 99.4 4E-13 8.6E-18 129.2 7.8 81 319-399 535-616 (807)
7 KOG0196 Tyrosine kinase, EPH ( 99.4 2.3E-13 4.9E-18 134.8 6.1 78 322-399 629-711 (996)
8 KOG0595 Serine/threonine-prote 99.4 1.1E-12 2.4E-17 121.5 9.1 78 322-399 10-90 (429)
9 KOG0197 Tyrosine kinases [Sign 99.3 4E-12 8.6E-17 121.7 4.5 83 316-399 200-282 (468)
10 KOG0194 Protein tyrosine kinas 99.2 1.9E-11 4.1E-16 118.7 7.7 85 315-399 150-242 (474)
11 KOG2052 Activin A type IB rece 99.2 1.9E-11 4.2E-16 114.4 6.6 74 322-399 211-290 (513)
12 PLN00113 leucine-rich repeat r 99.2 2.1E-10 4.5E-15 124.7 13.7 75 321-399 689-764 (968)
13 KOG0192 Tyrosine kinase specif 99.2 4.3E-11 9.3E-16 114.0 7.2 74 325-399 44-121 (362)
14 KOG1095 Protein tyrosine kinas 99.2 6.7E-11 1.5E-15 123.2 8.6 80 320-399 690-776 (1025)
15 KOG0600 Cdc2-related protein k 99.1 6E-11 1.3E-15 112.8 6.3 77 323-399 118-199 (560)
16 KOG0593 Predicted protein kina 99.1 3.1E-11 6.8E-16 107.9 3.5 76 324-399 4-82 (396)
17 KOG1025 Epidermal growth facto 99.1 4.8E-11 1E-15 119.2 4.6 74 324-398 698-777 (1177)
18 KOG4278 Protein tyrosine kinas 99.1 4.8E-11 1E-15 115.8 3.7 84 315-399 260-344 (1157)
19 KOG0659 Cdk activating kinase 99.1 1.5E-10 3.3E-15 101.8 5.7 77 323-399 3-82 (318)
20 KOG0580 Serine/threonine prote 99.1 6.8E-11 1.5E-15 102.5 2.8 79 321-399 21-103 (281)
21 KOG4257 Focal adhesion tyrosin 99.1 2.5E-10 5.5E-15 111.0 6.6 81 318-399 385-471 (974)
22 KOG0597 Serine-threonine prote 99.0 1.3E-10 2.8E-15 111.9 4.4 78 322-399 2-82 (808)
23 KOG0615 Serine/threonine prote 99.0 5.2E-10 1.1E-14 104.1 7.3 78 322-399 172-257 (475)
24 KOG0575 Polo-like serine/threo 99.0 1.1E-09 2.5E-14 106.5 8.4 78 322-399 18-99 (592)
25 KOG0193 Serine/threonine prote 98.9 1.1E-09 2.4E-14 106.4 6.0 82 314-398 384-467 (678)
26 cd05064 PTKc_EphR_A10 Catalyti 98.9 2.7E-09 5.9E-14 98.2 8.0 78 322-399 5-87 (266)
27 cd05105 PTKc_PDGFR_alpha Catal 98.9 3.4E-09 7.3E-14 103.6 8.2 84 316-399 31-122 (400)
28 cd06624 STKc_ASK Catalytic dom 98.9 6.7E-09 1.5E-13 95.5 9.5 83 317-399 3-86 (268)
29 cd05096 PTKc_DDR1 Catalytic do 98.9 7.1E-09 1.5E-13 97.4 9.4 78 322-399 5-100 (304)
30 PF07714 Pkinase_Tyr: Protein 98.9 4.3E-09 9.4E-14 96.6 7.5 74 326-399 3-82 (259)
31 cd05104 PTKc_Kit Catalytic dom 98.9 3.6E-09 7.8E-14 102.6 6.3 82 318-399 31-120 (375)
32 KOG0199 ACK and related non-re 98.8 1.4E-09 3E-14 107.2 3.0 76 323-399 111-191 (1039)
33 cd05626 STKc_LATS2 Catalytic d 98.8 1.2E-08 2.7E-13 99.1 9.2 77 323-399 2-82 (381)
34 KOG0586 Serine/threonine prote 98.8 1.1E-08 2.4E-13 99.8 8.6 79 321-399 55-136 (596)
35 PLN00034 mitogen-activated pro 98.8 1.1E-08 2.5E-13 98.2 8.9 77 323-399 75-153 (353)
36 cd06650 PKc_MEK1 Catalytic dom 98.8 1.8E-08 3.9E-13 96.1 10.1 79 321-399 4-84 (333)
37 cd05107 PTKc_PDGFR_beta Cataly 98.8 7.7E-09 1.7E-13 101.1 7.7 83 317-399 32-122 (401)
38 KOG0662 Cyclin-dependent kinas 98.8 2.6E-09 5.5E-14 88.9 3.3 76 324-399 4-82 (292)
39 cd05148 PTKc_Srm_Brk Catalytic 98.8 7.3E-09 1.6E-13 94.8 6.4 80 320-399 4-83 (261)
40 KOG4236 Serine/threonine prote 98.8 9E-09 1.9E-13 98.6 7.0 72 327-398 569-643 (888)
41 cd05102 PTKc_VEGFR3 Catalytic 98.8 6.4E-09 1.4E-13 99.3 6.1 81 319-399 4-93 (338)
42 KOG0663 Protein kinase PITSLRE 98.8 5.1E-09 1.1E-13 95.2 4.9 79 321-399 75-158 (419)
43 PTZ00263 protein kinase A cata 98.8 1.6E-08 3.4E-13 96.3 8.6 78 322-399 18-99 (329)
44 cd05599 STKc_NDR_like Catalyti 98.8 1.7E-08 3.7E-13 97.4 8.9 77 323-399 2-82 (364)
45 KOG0605 NDR and related serine 98.8 1.2E-08 2.6E-13 98.1 7.5 80 320-399 139-222 (550)
46 KOG0591 NIMA (never in mitosis 98.8 3.4E-10 7.5E-15 100.4 -2.7 78 322-399 19-101 (375)
47 cd05114 PTKc_Tec_Rlk Catalytic 98.8 1.4E-08 3.1E-13 92.7 7.9 76 323-399 5-80 (256)
48 cd05629 STKc_NDR_like_fungal C 98.8 1.9E-08 4.1E-13 97.6 9.1 77 323-399 2-82 (377)
49 KOG0611 Predicted serine/threo 98.8 2.6E-09 5.7E-14 99.2 2.9 76 324-399 55-134 (668)
50 cd06649 PKc_MEK2 Catalytic dom 98.8 3.1E-08 6.7E-13 94.4 10.2 78 322-399 5-84 (331)
51 cd07869 STKc_PFTAIRE1 Catalyti 98.8 2.5E-08 5.5E-13 93.6 9.4 78 322-399 5-84 (303)
52 cd05600 STKc_Sid2p_Dbf2p Catal 98.8 2.4E-08 5.1E-13 95.2 9.0 77 323-399 2-82 (333)
53 cd05085 PTKc_Fer Catalytic dom 98.8 3E-08 6.6E-13 90.0 9.4 72 328-399 1-73 (250)
54 cd05068 PTKc_Frk_like Catalyti 98.8 1.6E-08 3.5E-13 92.6 7.6 79 320-399 4-82 (261)
55 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.8 1.5E-08 3.3E-13 93.8 7.4 71 329-399 2-97 (274)
56 cd06611 STKc_SLK_like Catalyti 98.8 2E-08 4.4E-13 93.0 8.3 79 321-399 4-83 (280)
57 cd07871 STKc_PCTAIRE3 Catalyti 98.8 2.6E-08 5.7E-13 92.8 8.9 78 322-399 5-84 (288)
58 cd05625 STKc_LATS1 Catalytic d 98.8 2.8E-08 6E-13 96.6 9.2 77 323-399 2-82 (382)
59 KOG0661 MAPK related serine/th 98.8 1.5E-09 3.3E-14 102.7 0.3 77 322-399 10-91 (538)
60 cd07872 STKc_PCTAIRE2 Catalyti 98.8 2.9E-08 6.3E-13 93.5 9.0 78 322-399 6-85 (309)
61 cd06646 STKc_MAP4K5 Catalytic 98.8 4.2E-08 9.1E-13 90.1 9.8 78 322-399 9-87 (267)
62 cd05033 PTKc_EphR Catalytic do 98.8 3.1E-08 6.7E-13 91.0 8.9 78 322-399 4-86 (266)
63 cd07848 STKc_CDKL5 Catalytic d 98.8 2.1E-08 4.6E-13 93.2 7.8 77 323-399 2-81 (287)
64 cd06615 PKc_MEK Catalytic doma 98.8 4.8E-08 1E-12 92.0 10.3 77 323-399 2-80 (308)
65 cd05106 PTKc_CSF-1R Catalytic 98.7 1.4E-08 2.9E-13 98.6 6.4 82 318-399 34-123 (374)
66 PTZ00426 cAMP-dependent protei 98.7 2.9E-08 6.3E-13 94.9 8.6 78 322-399 30-112 (340)
67 cd05612 STKc_PRKX_like Catalyt 98.7 1.7E-08 3.8E-13 94.2 6.9 77 323-399 2-82 (291)
68 PHA02988 hypothetical protein; 98.7 3.6E-08 7.9E-13 91.7 8.8 72 327-399 25-103 (283)
69 cd05598 STKc_LATS Catalytic do 98.7 3.6E-08 7.8E-13 95.6 9.1 77 323-399 2-82 (376)
70 cd05090 PTKc_Ror1 Catalytic do 98.7 3.5E-08 7.5E-13 91.6 8.6 77 323-399 6-88 (283)
71 cd05072 PTKc_Lyn Catalytic dom 98.7 2.5E-08 5.4E-13 91.3 7.6 78 321-399 5-82 (261)
72 cd06619 PKc_MKK5 Catalytic dom 98.7 6.6E-08 1.4E-12 89.6 10.5 77 323-399 2-80 (279)
73 cd05034 PTKc_Src_like Catalyti 98.7 3.9E-08 8.4E-13 90.0 8.3 79 320-399 4-82 (261)
74 cd05113 PTKc_Btk_Bmx Catalytic 98.7 2.8E-08 6.2E-13 90.8 7.3 76 323-399 5-80 (256)
75 cd06644 STKc_STK10_LOK Catalyt 98.7 5.6E-08 1.2E-12 90.7 9.4 79 321-399 11-90 (292)
76 cd05605 STKc_GRK4_like Catalyt 98.7 4E-08 8.6E-13 91.4 8.3 76 324-399 2-81 (285)
77 KOG0585 Ca2+/calmodulin-depend 98.7 3.7E-08 8E-13 93.5 7.9 80 320-399 95-191 (576)
78 cd05628 STKc_NDR1 Catalytic do 98.7 5.1E-08 1.1E-12 94.1 9.1 78 322-399 1-82 (363)
79 cd05084 PTKc_Fes Catalytic dom 98.7 5.3E-08 1.1E-12 88.6 8.7 72 328-399 1-74 (252)
80 KOG4721 Serine/threonine prote 98.7 7.2E-09 1.6E-13 100.1 2.9 73 319-399 121-193 (904)
81 KOG0581 Mitogen-activated prot 98.7 5.2E-08 1.1E-12 89.9 8.4 76 324-399 81-159 (364)
82 cd08228 STKc_Nek6 Catalytic do 98.7 7.9E-08 1.7E-12 88.2 9.8 78 322-399 2-83 (267)
83 cd05631 STKc_GRK4 Catalytic do 98.7 4.8E-08 1E-12 90.9 8.4 76 324-399 2-81 (285)
84 cd05050 PTKc_Musk Catalytic do 98.7 4E-08 8.8E-13 91.4 7.9 79 321-399 4-89 (288)
85 cd05571 STKc_PKB Catalytic dom 98.7 6.8E-08 1.5E-12 91.6 9.5 72 328-399 1-76 (323)
86 cd05061 PTKc_InsR Catalytic do 98.7 4.2E-08 9.1E-13 91.4 7.9 81 319-399 3-90 (288)
87 cd07853 STKc_NLK Catalytic dom 98.7 5E-08 1.1E-12 94.5 8.7 76 324-399 2-85 (372)
88 KOG0032 Ca2+/calmodulin-depend 98.7 4.6E-08 9.9E-13 94.2 8.2 79 321-399 34-117 (382)
89 cd06632 STKc_MEKK1_plant Catal 98.7 8E-08 1.7E-12 87.5 9.5 76 324-399 2-83 (258)
90 cd05062 PTKc_IGF-1R Catalytic 98.7 4.1E-08 8.9E-13 90.8 7.6 80 320-399 4-90 (277)
91 KOG0598 Ribosomal protein S6 k 98.7 2.6E-08 5.7E-13 91.8 6.1 79 321-399 24-106 (357)
92 cd05595 STKc_PKB_beta Catalyti 98.7 7.2E-08 1.6E-12 91.5 9.3 72 328-399 1-76 (323)
93 cd05596 STKc_ROCK Catalytic do 98.7 4.1E-08 8.9E-13 95.0 7.7 80 320-399 41-124 (370)
94 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.7 7.7E-08 1.7E-12 89.3 9.2 78 322-399 4-88 (284)
95 cd05066 PTKc_EphR_A Catalytic 98.7 6E-08 1.3E-12 89.2 8.4 78 322-399 4-86 (267)
96 cd05621 STKc_ROCK2 Catalytic d 98.7 5.1E-08 1.1E-12 94.4 8.2 83 317-399 38-124 (370)
97 cd05049 PTKc_Trk Catalytic dom 98.7 4.6E-08 1E-12 90.5 7.6 78 322-399 5-89 (280)
98 cd05597 STKc_DMPK_like Catalyt 98.7 7.8E-08 1.7E-12 91.6 9.3 77 323-399 2-82 (331)
99 cd06643 STKc_SLK Catalytic dom 98.7 6.8E-08 1.5E-12 89.6 8.7 76 324-399 7-83 (282)
100 cd07873 STKc_PCTAIRE1 Catalyti 98.7 8.2E-08 1.8E-12 90.0 9.2 78 322-399 6-85 (301)
101 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.7 7.5E-08 1.6E-12 88.6 8.8 72 328-399 1-76 (269)
102 cd06620 PKc_MAPKK_Byr1_like Ca 98.7 6.3E-08 1.4E-12 89.9 8.3 77 323-399 6-84 (284)
103 cd06641 STKc_MST3 Catalytic do 98.7 1.1E-07 2.3E-12 88.0 9.8 76 324-399 6-83 (277)
104 cd05593 STKc_PKB_gamma Catalyt 98.7 9.6E-08 2.1E-12 90.9 9.7 72 328-399 1-76 (328)
105 cd06613 STKc_MAP4K3_like Catal 98.7 1.1E-07 2.5E-12 86.8 9.7 79 321-399 2-81 (262)
106 cd05039 PTKc_Csk_like Catalyti 98.7 7.4E-08 1.6E-12 87.9 8.4 76 322-399 6-81 (256)
107 cd06631 STKc_YSK4 Catalytic do 98.7 1.3E-07 2.8E-12 86.8 10.0 76 324-399 2-83 (265)
108 cd06645 STKc_MAP4K3 Catalytic 98.7 6.9E-08 1.5E-12 88.7 8.0 78 322-399 9-87 (267)
109 cd05065 PTKc_EphR_B Catalytic 98.7 6.5E-08 1.4E-12 89.0 7.8 77 323-399 5-86 (269)
110 cd08224 STKc_Nek6_Nek7 Catalyt 98.6 1.2E-07 2.6E-12 86.9 9.4 78 322-399 2-83 (267)
111 cd05067 PTKc_Lck_Blk Catalytic 98.6 6.2E-08 1.3E-12 88.7 7.4 78 320-399 4-81 (260)
112 cd05585 STKc_YPK1_like Catalyt 98.6 9.6E-08 2.1E-12 90.2 8.9 70 330-399 1-74 (312)
113 cd05077 PTK_Jak1_rpt1 Pseudoki 98.6 7.5E-08 1.6E-12 88.4 7.9 72 328-399 1-85 (262)
114 cd05622 STKc_ROCK1 Catalytic d 98.6 7.7E-08 1.7E-12 93.2 8.3 85 315-399 36-124 (371)
115 cd06656 STKc_PAK3 Catalytic do 98.6 1.3E-07 2.7E-12 88.6 9.5 78 322-399 19-97 (297)
116 cd05036 PTKc_ALK_LTK Catalytic 98.6 7.2E-08 1.6E-12 89.2 7.7 80 320-399 4-90 (277)
117 cd05097 PTKc_DDR_like Catalyti 98.6 6.2E-08 1.3E-12 90.6 7.3 78 322-399 5-98 (295)
118 cd06607 STKc_TAO Catalytic dom 98.6 1.1E-07 2.3E-12 89.6 8.9 79 321-399 14-96 (307)
119 cd07836 STKc_Pho85 Catalytic d 98.6 1E-07 2.3E-12 88.3 8.8 77 323-399 1-79 (284)
120 cd05042 PTKc_Aatyk Catalytic d 98.6 1.1E-07 2.4E-12 87.4 8.8 72 328-399 1-76 (269)
121 cd05582 STKc_RSK_N N-terminal 98.6 1.3E-07 2.7E-12 89.6 9.3 72 328-399 2-79 (318)
122 cd05093 PTKc_TrkB Catalytic do 98.6 9.6E-08 2.1E-12 88.9 8.4 78 322-399 5-88 (288)
123 KOG0594 Protein kinase PCTAIRE 98.6 4.8E-08 1E-12 89.8 6.0 77 323-399 12-98 (323)
124 cd06622 PKc_MAPKK_PBS2_like Ca 98.6 7.3E-08 1.6E-12 89.5 7.4 77 323-399 2-80 (286)
125 cd05624 STKc_MRCK_beta Catalyt 98.6 1.1E-07 2.5E-12 90.5 8.9 77 323-399 2-82 (331)
126 cd05584 STKc_p70S6K Catalytic 98.6 1.3E-07 2.9E-12 89.6 9.3 72 328-399 2-81 (323)
127 cd07844 STKc_PCTAIRE_like Cata 98.6 1.1E-07 2.3E-12 88.7 8.5 78 322-399 5-84 (291)
128 KOG0577 Serine/threonine prote 98.6 1.1E-08 2.4E-13 99.2 1.9 76 324-399 28-107 (948)
129 cd05043 PTK_Ryk Pseudokinase d 98.6 9.5E-08 2.1E-12 88.4 8.1 79 321-399 5-90 (280)
130 PRK13184 pknD serine/threonine 98.6 1.4E-07 3.1E-12 99.0 10.2 78 322-399 2-83 (932)
131 cd07870 STKc_PFTAIRE2 Catalyti 98.6 1.1E-07 2.5E-12 88.5 8.7 79 321-399 4-84 (291)
132 cd08529 STKc_FA2-like Catalyti 98.6 1.3E-07 2.9E-12 86.0 8.9 76 324-399 2-80 (256)
133 cd05103 PTKc_VEGFR2 Catalytic 98.6 6.5E-08 1.4E-12 92.6 6.8 80 320-399 5-93 (343)
134 cd07859 STKc_TDY_MAPK_plant Ca 98.6 1.1E-07 2.4E-12 90.5 8.4 76 324-399 2-85 (338)
135 cd07861 STKc_CDK1_euk Catalyti 98.6 1.6E-07 3.4E-12 87.1 9.2 76 324-399 2-80 (285)
136 cd05045 PTKc_RET Catalytic dom 98.6 1.5E-07 3.2E-12 87.8 8.9 76 324-399 2-84 (290)
137 cd07860 STKc_CDK2_3 Catalytic 98.6 8E-08 1.7E-12 89.1 7.1 77 323-399 1-80 (284)
138 cd05627 STKc_NDR2 Catalytic do 98.6 1.4E-07 2.9E-12 91.0 8.9 77 323-399 2-82 (360)
139 cd05573 STKc_ROCK_NDR_like Cat 98.6 7.4E-08 1.6E-12 92.3 7.1 77 323-399 2-82 (350)
140 cd07846 STKc_CDKL2_3 Catalytic 98.6 6.2E-08 1.3E-12 89.9 6.4 77 323-399 2-81 (286)
141 cd05092 PTKc_TrkA Catalytic do 98.6 1.6E-07 3.5E-12 87.0 9.1 78 322-399 5-88 (280)
142 KOG4250 TANK binding protein k 98.6 1.6E-08 3.5E-13 100.2 2.4 76 324-399 15-98 (732)
143 cd06640 STKc_MST4 Catalytic do 98.6 2.1E-07 4.5E-12 86.1 9.7 77 323-399 5-83 (277)
144 cd05601 STKc_CRIK Catalytic do 98.6 1.4E-07 3E-12 89.7 8.7 77 323-399 2-82 (330)
145 cd05594 STKc_PKB_alpha Catalyt 98.6 2E-07 4.2E-12 88.6 9.6 72 328-399 1-76 (325)
146 cd06630 STKc_MEKK1 Catalytic d 98.6 1.7E-07 3.6E-12 86.0 8.9 77 323-399 1-84 (268)
147 cd05063 PTKc_EphR_A2 Catalytic 98.6 1.2E-07 2.6E-12 87.1 7.9 78 322-399 5-87 (268)
148 cd07847 STKc_CDKL1_4 Catalytic 98.6 1.8E-07 4E-12 86.7 9.2 77 323-399 2-81 (286)
149 cd06654 STKc_PAK1 Catalytic do 98.6 2.1E-07 4.5E-12 87.1 9.6 78 322-399 20-98 (296)
150 cd05632 STKc_GRK5 Catalytic do 98.6 1.8E-07 3.9E-12 87.0 9.1 76 324-399 2-81 (285)
151 cd05073 PTKc_Hck Catalytic dom 98.6 1.3E-07 2.8E-12 86.6 8.0 78 320-399 4-81 (260)
152 cd05623 STKc_MRCK_alpha Cataly 98.6 1.6E-07 3.4E-12 89.5 8.8 77 323-399 2-82 (332)
153 cd06642 STKc_STK25-YSK1 Cataly 98.6 7.7E-08 1.7E-12 89.0 6.5 76 324-399 6-83 (277)
154 cd05046 PTK_CCK4 Pseudokinase 98.6 1.2E-07 2.5E-12 87.6 7.6 78 322-399 5-89 (275)
155 cd08227 PK_STRAD_alpha Pseudok 98.6 2.1E-07 4.6E-12 88.4 9.6 73 327-399 3-80 (327)
156 cd05052 PTKc_Abl Catalytic dom 98.6 1E-07 2.2E-12 87.4 7.1 76 323-399 7-83 (263)
157 cd05095 PTKc_DDR2 Catalytic do 98.6 1.3E-07 2.8E-12 88.5 7.9 79 321-399 4-100 (296)
158 KOG0658 Glycogen synthase kina 98.6 2.9E-08 6.3E-13 91.4 3.3 72 324-399 26-103 (364)
159 cd05059 PTKc_Tec_like Catalyti 98.6 1.5E-07 3.2E-12 86.0 8.1 76 323-399 5-80 (256)
160 cd08229 STKc_Nek7 Catalytic do 98.6 1.4E-07 3.1E-12 86.5 8.0 77 323-399 3-83 (267)
161 cd05108 PTKc_EGFR Catalytic do 98.6 1.3E-07 2.9E-12 89.3 8.0 77 322-399 7-89 (316)
162 cd05580 STKc_PKA Catalytic dom 98.6 2E-07 4.3E-12 86.9 9.1 77 323-399 2-82 (290)
163 cd06635 STKc_TAO1 Catalytic do 98.6 2E-07 4.4E-12 88.1 9.2 76 324-399 27-106 (317)
164 PLN00009 cyclin-dependent kina 98.6 1.7E-07 3.7E-12 87.4 8.6 78 322-399 2-82 (294)
165 cd06612 STKc_MST1_2 Catalytic 98.6 1.8E-07 4E-12 85.1 8.6 76 322-399 3-79 (256)
166 cd06609 STKc_MST3_like Catalyt 98.6 2.5E-07 5.4E-12 85.4 9.5 77 323-399 2-80 (274)
167 KOG0578 p21-activated serine/t 98.6 3.4E-08 7.4E-13 95.6 3.8 80 320-399 271-351 (550)
168 cd05589 STKc_PKN Catalytic dom 98.6 1.7E-07 3.6E-12 89.0 8.6 75 325-399 2-83 (324)
169 cd05588 STKc_aPKC Catalytic do 98.6 2.4E-07 5.1E-12 88.2 9.5 72 328-399 1-77 (329)
170 cd06617 PKc_MKK3_6 Catalytic d 98.6 2E-07 4.3E-12 86.4 8.7 77 323-399 2-81 (283)
171 cd05048 PTKc_Ror Catalytic Dom 98.6 1.8E-07 3.8E-12 86.7 8.4 77 323-399 6-89 (283)
172 cd07841 STKc_CDK7 Catalytic do 98.6 1.7E-07 3.7E-12 87.6 8.3 76 324-399 2-83 (298)
173 cd05055 PTKc_PDGFR Catalytic d 98.6 1.7E-07 3.6E-12 88.1 8.1 79 321-399 34-120 (302)
174 cd05051 PTKc_DDR Catalytic dom 98.6 2.1E-07 4.6E-12 86.8 8.9 79 321-399 4-100 (296)
175 cd05112 PTKc_Itk Catalytic dom 98.6 1.9E-07 4.1E-12 85.1 8.3 76 323-399 5-80 (256)
176 cd05035 PTKc_Axl_like Catalyti 98.6 2.3E-07 4.9E-12 85.3 8.9 76 324-399 1-88 (273)
177 cd06625 STKc_MEKK3_like Cataly 98.6 3E-07 6.5E-12 84.1 9.6 78 322-399 2-85 (263)
178 cd06626 STKc_MEKK4 Catalytic d 98.6 2.6E-07 5.7E-12 84.5 9.2 76 324-399 2-80 (264)
179 cd06647 STKc_PAK_I Catalytic d 98.6 1.9E-07 4E-12 87.3 8.4 78 322-399 19-97 (293)
180 cd05041 PTKc_Fes_like Catalyti 98.6 2.3E-07 5.1E-12 84.3 8.7 72 328-399 1-73 (251)
181 cd05071 PTKc_Src Catalytic dom 98.6 1.3E-07 2.9E-12 86.7 7.2 77 321-399 5-81 (262)
182 cd06629 STKc_MAPKKK_Bck1_like 98.6 1.9E-07 4.2E-12 85.9 8.3 76 324-399 3-89 (272)
183 KOG0583 Serine/threonine prote 98.6 1.8E-07 3.9E-12 90.0 8.3 79 321-399 16-101 (370)
184 cd05070 PTKc_Fyn_Yrk Catalytic 98.6 1.5E-07 3.2E-12 86.1 7.4 76 322-399 6-81 (260)
185 cd05032 PTKc_InsR_like Catalyt 98.6 1.5E-07 3.1E-12 87.0 7.3 79 321-399 5-90 (277)
186 cd05086 PTKc_Aatyk2 Catalytic 98.6 2.5E-07 5.5E-12 85.1 8.9 72 328-399 1-76 (268)
187 cd05053 PTKc_FGFR Catalytic do 98.6 1.5E-07 3.4E-12 87.6 7.6 82 318-399 8-97 (293)
188 cd05630 STKc_GRK6 Catalytic do 98.6 2.8E-07 6.2E-12 85.7 9.3 76 324-399 2-81 (285)
189 cd06655 STKc_PAK2 Catalytic do 98.6 2.3E-07 5E-12 86.9 8.7 78 322-399 19-97 (296)
190 cd07842 STKc_CDK8_like Catalyt 98.6 2.4E-07 5.3E-12 87.2 8.9 76 324-399 2-85 (316)
191 cd08219 STKc_Nek3 Catalytic do 98.6 3.8E-07 8.2E-12 83.1 9.9 76 324-399 2-79 (255)
192 cd05608 STKc_GRK1 Catalytic do 98.6 2.4E-07 5.2E-12 85.9 8.7 70 330-399 1-74 (280)
193 cd06637 STKc_TNIK Catalytic do 98.6 2.3E-07 4.9E-12 85.4 8.4 80 319-399 3-90 (272)
194 cd08225 STKc_Nek5 Catalytic do 98.6 1.5E-07 3.3E-12 85.7 7.2 76 324-399 2-80 (257)
195 cd08218 STKc_Nek1 Catalytic do 98.6 2.9E-07 6.3E-12 83.9 9.0 76 324-399 2-80 (256)
196 cd07864 STKc_CDK12 Catalytic d 98.5 1.9E-07 4.1E-12 87.4 7.9 80 320-399 5-97 (302)
197 cd06623 PKc_MAPKK_plant_like C 98.5 3.6E-07 7.9E-12 83.5 9.6 77 323-399 2-80 (264)
198 PHA03212 serine/threonine kina 98.5 2.4E-07 5.1E-12 90.4 8.7 72 322-399 92-164 (391)
199 cd05618 STKc_aPKC_iota Catalyt 98.5 3.6E-07 7.8E-12 87.0 9.8 72 328-399 1-77 (329)
200 cd06628 STKc_MAPKKK_Byr2_like 98.5 3.4E-07 7.4E-12 84.0 9.4 76 324-399 2-87 (267)
201 PTZ00267 NIMA-related protein 98.5 2.7E-07 5.9E-12 92.4 9.3 76 324-399 69-146 (478)
202 KOG0198 MEKK and related serin 98.5 1.7E-07 3.6E-12 87.2 7.2 78 322-399 17-97 (313)
203 cd07832 STKc_CCRK Catalytic do 98.5 3.2E-07 7E-12 85.0 9.2 76 324-399 2-80 (286)
204 cd08221 STKc_Nek9 Catalytic do 98.5 3.7E-07 8E-12 83.2 9.4 76 324-399 2-80 (256)
205 cd07876 STKc_JNK2 Catalytic do 98.5 2.7E-07 5.9E-12 88.9 8.8 79 321-399 20-107 (359)
206 cd05091 PTKc_Ror2 Catalytic do 98.5 2.1E-07 4.5E-12 86.3 7.6 76 324-399 7-89 (283)
207 cd05609 STKc_MAST Catalytic do 98.5 3.6E-07 7.8E-12 85.9 9.4 77 323-399 2-82 (305)
208 cd05591 STKc_nPKC_epsilon Cata 98.5 3.3E-07 7.1E-12 86.9 9.2 72 328-399 1-77 (321)
209 cd07833 STKc_CDKL Catalytic do 98.5 1.8E-07 4E-12 86.7 7.3 77 323-399 2-81 (288)
210 cd05088 PTKc_Tie2 Catalytic do 98.5 2.4E-07 5.1E-12 87.1 8.0 78 322-399 7-89 (303)
211 cd05038 PTKc_Jak_rpt2 Catalyti 98.5 3.3E-07 7.2E-12 84.8 8.9 77 323-399 5-89 (284)
212 cd05098 PTKc_FGFR1 Catalytic d 98.5 2.7E-07 5.8E-12 86.8 8.3 79 321-399 17-105 (307)
213 cd05603 STKc_SGK2 Catalytic do 98.5 3.7E-07 8E-12 86.5 9.2 72 328-399 1-77 (321)
214 cd05607 STKc_GRK7 Catalytic do 98.5 3.5E-07 7.6E-12 84.7 8.8 70 330-399 1-74 (277)
215 cd06638 STKc_myosinIIIA Cataly 98.5 2.2E-07 4.8E-12 86.2 7.5 85 314-399 10-101 (286)
216 cd06657 STKc_PAK4 Catalytic do 98.5 4.6E-07 9.9E-12 84.7 9.5 73 327-399 25-98 (292)
217 PRK09188 serine/threonine prot 98.5 4.7E-07 1E-11 86.6 9.6 78 319-399 15-99 (365)
218 smart00219 TyrKc Tyrosine kina 98.5 3.9E-07 8.5E-12 82.9 8.8 75 325-399 2-82 (258)
219 cd05094 PTKc_TrkC Catalytic do 98.5 2.8E-07 6E-12 86.0 8.0 77 323-399 6-88 (291)
220 cd06659 STKc_PAK6 Catalytic do 98.5 2.2E-07 4.8E-12 87.0 7.3 74 326-399 25-99 (297)
221 cd05578 STKc_Yank1 Catalytic d 98.5 1.6E-07 3.4E-12 85.8 6.1 77 323-399 1-81 (258)
222 cd06605 PKc_MAPKK Catalytic do 98.5 3.3E-07 7.2E-12 83.9 8.3 77 323-399 2-80 (265)
223 cd06621 PKc_MAPKK_Pek1_like Ca 98.5 4.4E-07 9.5E-12 84.4 9.2 77 323-399 2-82 (287)
224 cd05570 STKc_PKC Catalytic dom 98.5 3.8E-07 8.2E-12 86.4 8.8 72 328-399 1-77 (318)
225 cd06610 STKc_OSR1_SPAK Catalyt 98.5 5.9E-07 1.3E-11 82.2 9.9 77 323-399 2-80 (267)
226 cd05040 PTKc_Ack_like Catalyti 98.5 3.3E-07 7.1E-12 83.6 8.2 71 328-399 1-76 (257)
227 cd06614 STKc_PAK Catalytic dom 98.5 4.4E-07 9.6E-12 84.3 9.2 80 319-399 16-96 (286)
228 cd05037 PTK_Jak_rpt1 Pseudokin 98.5 2.7E-07 5.9E-12 84.1 7.6 70 328-399 1-81 (259)
229 cd06658 STKc_PAK5 Catalytic do 98.5 1.9E-07 4.1E-12 87.2 6.7 76 324-399 24-100 (292)
230 cd05116 PTKc_Syk Catalytic dom 98.5 4.2E-07 9E-12 83.1 8.8 70 329-399 2-76 (257)
231 KOG0607 MAP kinase-interacting 98.5 6.1E-08 1.3E-12 87.7 3.1 80 314-398 75-156 (463)
232 PTZ00266 NIMA-related protein 98.5 3.7E-07 8E-12 96.5 9.4 82 318-399 9-95 (1021)
233 cd08220 STKc_Nek8 Catalytic do 98.5 5E-07 1.1E-11 82.2 9.3 76 324-399 2-80 (256)
234 cd07843 STKc_CDC2L1 Catalytic 98.5 3.1E-07 6.8E-12 85.6 8.1 78 322-399 5-87 (293)
235 cd06652 STKc_MEKK2 Catalytic d 98.5 5.3E-07 1.2E-11 82.7 9.5 78 322-399 2-87 (265)
236 cd05089 PTKc_Tie1 Catalytic do 98.5 3.4E-07 7.4E-12 85.7 8.2 78 322-399 2-84 (297)
237 cd06633 STKc_TAO3 Catalytic do 98.5 7E-07 1.5E-11 84.3 10.4 76 324-399 23-102 (313)
238 cd07856 STKc_Sty1_Hog1 Catalyt 98.5 3.4E-07 7.4E-12 87.1 8.2 83 317-399 5-91 (328)
239 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.5 1E-07 2.2E-12 87.2 4.5 72 328-399 1-80 (258)
240 cd05115 PTKc_Zap-70 Catalytic 98.5 4.2E-07 9.2E-12 83.1 8.6 70 329-399 2-75 (257)
241 cd08528 STKc_Nek10 Catalytic d 98.5 5.3E-07 1.1E-11 82.9 9.2 76 324-399 2-90 (269)
242 KOG0582 Ste20-like serine/thre 98.5 3.6E-07 7.8E-12 86.3 8.0 79 321-399 25-105 (516)
243 cd05604 STKc_SGK3 Catalytic do 98.5 5.2E-07 1.1E-11 85.7 9.4 72 328-399 1-77 (325)
244 cd05619 STKc_nPKC_theta Cataly 98.5 5.1E-07 1.1E-11 85.4 9.2 72 328-399 1-77 (316)
245 cd05075 PTKc_Axl Catalytic dom 98.5 5.3E-07 1.1E-11 83.0 9.0 75 325-399 2-87 (272)
246 PF00069 Pkinase: Protein kina 98.5 3.5E-07 7.7E-12 83.3 7.8 75 325-399 2-79 (260)
247 cd06616 PKc_MKK4 Catalytic dom 98.5 3.8E-07 8.3E-12 84.8 8.1 77 323-399 5-84 (288)
248 cd07835 STKc_CDK1_like Catalyt 98.5 3.7E-07 8E-12 84.6 8.0 75 325-399 2-79 (283)
249 cd05054 PTKc_VEGFR Catalytic d 98.5 2.2E-07 4.7E-12 88.8 6.6 81 319-399 4-93 (337)
250 cd05575 STKc_SGK Catalytic dom 98.5 5.7E-07 1.2E-11 85.3 9.4 72 328-399 1-77 (323)
251 cd05101 PTKc_FGFR2 Catalytic d 98.5 3.7E-07 8.1E-12 85.7 8.0 79 321-399 14-102 (304)
252 cd05610 STKc_MASTL Catalytic d 98.5 5.5E-07 1.2E-11 93.8 10.0 78 322-399 4-85 (669)
253 KOG0574 STE20-like serine/thre 98.5 1.9E-08 4.2E-13 90.1 -0.8 75 323-399 34-109 (502)
254 cd05099 PTKc_FGFR4 Catalytic d 98.5 3.5E-07 7.6E-12 86.3 7.8 80 320-399 10-99 (314)
255 cd05057 PTKc_EGFR_like Catalyt 98.5 4.5E-07 9.8E-12 83.9 8.4 77 322-399 7-89 (279)
256 cd05574 STKc_phototropin_like 98.5 5.7E-07 1.2E-11 84.9 9.2 77 323-399 2-82 (316)
257 cd07840 STKc_CDK9_like Catalyt 98.5 4.7E-07 1E-11 83.8 8.5 75 325-399 2-81 (287)
258 cd06917 STKc_NAK1_like Catalyt 98.5 6E-07 1.3E-11 82.9 9.2 76 324-399 3-83 (277)
259 cd05590 STKc_nPKC_eta Catalyti 98.5 4.6E-07 1E-11 85.8 8.6 72 328-399 1-77 (320)
260 cd05592 STKc_nPKC_theta_delta 98.5 5.5E-07 1.2E-11 85.2 9.0 72 328-399 1-77 (316)
261 cd06651 STKc_MEKK3 Catalytic d 98.5 9.1E-07 2E-11 81.3 10.2 77 323-399 3-87 (266)
262 cd05056 PTKc_FAK Catalytic dom 98.5 3.4E-07 7.3E-12 84.3 7.3 77 322-399 6-87 (270)
263 cd05079 PTKc_Jak1_rpt2 Catalyt 98.5 5.2E-07 1.1E-11 83.8 8.6 77 323-399 5-89 (284)
264 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.5 7.8E-07 1.7E-11 82.5 9.6 76 324-399 6-89 (283)
265 cd07862 STKc_CDK6 Catalytic do 98.5 6.7E-07 1.5E-11 83.2 9.2 77 323-399 2-90 (290)
266 cd05100 PTKc_FGFR3 Catalytic d 98.5 4E-07 8.6E-12 86.8 7.6 78 322-399 12-99 (334)
267 cd07837 STKc_CdkB_plant Cataly 98.5 5.2E-07 1.1E-11 84.1 8.3 77 323-399 2-87 (295)
268 cd06627 STKc_Cdc7_like Catalyt 98.5 1.1E-06 2.3E-11 79.8 10.1 76 324-399 2-80 (254)
269 cd07845 STKc_CDK10 Catalytic d 98.5 5.9E-07 1.3E-11 84.5 8.5 79 321-399 6-89 (309)
270 cd07875 STKc_JNK1 Catalytic do 98.5 5.9E-07 1.3E-11 86.7 8.7 79 321-399 23-110 (364)
271 PHA03211 serine/threonine kina 98.5 4.9E-07 1.1E-11 89.8 8.3 72 322-399 169-241 (461)
272 cd07868 STKc_CDK8 Catalytic do 98.4 6.7E-07 1.5E-11 84.4 8.8 71 327-399 6-81 (317)
273 PTZ00036 glycogen synthase kin 98.4 6.3E-07 1.4E-11 88.8 8.9 76 320-399 64-148 (440)
274 cd05587 STKc_cPKC Catalytic do 98.4 6.7E-07 1.4E-11 84.9 8.8 76 324-399 2-82 (324)
275 cd06634 STKc_TAO2 Catalytic do 98.4 7.1E-07 1.5E-11 84.0 8.8 76 324-399 17-96 (308)
276 cd00192 PTKc Catalytic domain 98.4 7.4E-07 1.6E-11 81.1 8.6 72 328-399 1-77 (262)
277 cd06606 STKc_MAPKKK Catalytic 98.4 1E-06 2.2E-11 79.9 9.5 76 324-399 2-82 (260)
278 cd05047 PTKc_Tie Catalytic dom 98.4 7.7E-07 1.7E-11 82.0 8.8 72 328-399 1-77 (270)
279 cd05069 PTKc_Yes Catalytic dom 98.4 4.8E-07 1E-11 82.8 7.3 76 322-399 6-81 (260)
280 cd07839 STKc_CDK5 Catalytic do 98.4 2.5E-07 5.5E-12 85.7 5.5 76 324-399 2-80 (284)
281 cd05617 STKc_aPKC_zeta Catalyt 98.4 9.1E-07 2E-11 84.1 9.4 72 328-399 1-77 (327)
282 KOG0201 Serine/threonine prote 98.4 7.8E-08 1.7E-12 90.5 2.0 77 323-399 14-92 (467)
283 KOG0200 Fibroblast/platelet-de 98.4 3.1E-07 6.8E-12 94.4 6.6 84 316-399 290-383 (609)
284 cd06618 PKc_MKK7 Catalytic dom 98.4 6.8E-07 1.5E-11 83.6 8.3 79 321-399 14-95 (296)
285 KOG1989 ARK protein kinase fam 98.4 3.1E-07 6.8E-12 93.3 6.4 79 321-399 36-123 (738)
286 cd07874 STKc_JNK3 Catalytic do 98.4 5.7E-07 1.2E-11 86.5 8.0 80 320-399 15-103 (355)
287 cd06608 STKc_myosinIII_like Ca 98.4 9.2E-07 2E-11 81.2 9.0 80 319-399 3-90 (275)
288 cd06639 STKc_myosinIIIB Cataly 98.4 7.5E-07 1.6E-11 83.0 8.5 86 313-399 13-105 (291)
289 cd05122 PKc_STE Catalytic doma 98.4 1.3E-06 2.9E-11 78.8 9.9 76 324-399 2-78 (253)
290 KOG0694 Serine/threonine prote 98.4 4.4E-07 9.4E-12 90.0 6.9 80 320-399 366-450 (694)
291 cd07865 STKc_CDK9 Catalytic do 98.4 7.2E-07 1.6E-11 83.7 8.3 78 322-399 12-100 (310)
292 cd07880 STKc_p38gamma_MAPK12 C 98.4 8.5E-07 1.8E-11 84.9 8.8 82 318-399 11-101 (343)
293 cd06648 STKc_PAK_II Catalytic 98.4 1.2E-06 2.6E-11 81.4 9.6 76 324-399 21-97 (285)
294 cd05616 STKc_cPKC_beta Catalyt 98.4 9.2E-07 2E-11 83.9 8.9 76 324-399 2-82 (323)
295 cd07867 STKc_CDC2L6 Catalytic 98.4 8.1E-07 1.8E-11 83.8 8.5 71 327-399 6-81 (317)
296 cd05614 STKc_MSK2_N N-terminal 98.4 1E-06 2.2E-11 83.8 9.3 76 324-399 2-86 (332)
297 cd06653 STKc_MEKK3_like_1 Cata 98.4 1.4E-06 2.9E-11 80.0 9.8 78 322-399 2-87 (264)
298 KOG1035 eIF-2alpha kinase GCN2 98.4 9.4E-08 2E-12 99.9 2.2 73 320-392 477-551 (1351)
299 cd05044 PTKc_c-ros Catalytic d 98.4 3.8E-07 8.3E-12 83.8 6.0 72 328-399 1-80 (269)
300 cd05620 STKc_nPKC_delta Cataly 98.4 9E-07 1.9E-11 83.7 8.6 72 328-399 1-77 (316)
301 PTZ00024 cyclin-dependent prot 98.4 8.2E-07 1.8E-11 84.6 8.4 74 326-399 13-101 (335)
302 cd05058 PTKc_Met_Ron Catalytic 98.4 1E-06 2.2E-11 80.5 8.7 72 328-399 1-78 (262)
303 KOG0616 cAMP-dependent protein 98.4 5.1E-07 1.1E-11 81.1 6.2 78 322-399 44-125 (355)
304 cd05577 STKc_GRK Catalytic dom 98.4 1.2E-06 2.6E-11 81.0 9.0 70 330-399 1-74 (277)
305 PHA03209 serine/threonine kina 98.4 7.3E-07 1.6E-11 85.9 7.4 73 321-399 65-138 (357)
306 cd05074 PTKc_Tyro3 Catalytic d 98.4 1.2E-06 2.6E-11 80.6 8.6 75 325-399 2-88 (273)
307 cd07878 STKc_p38beta_MAPK11 Ca 98.4 7.2E-07 1.6E-11 85.3 7.3 80 320-399 13-101 (343)
308 cd07879 STKc_p38delta_MAPK13 C 98.4 9.6E-07 2.1E-11 84.5 7.9 78 322-399 15-101 (342)
309 cd05602 STKc_SGK1 Catalytic do 98.4 1.6E-06 3.5E-11 82.3 9.4 72 328-399 1-77 (325)
310 cd07849 STKc_ERK1_2_like Catal 98.4 8.9E-07 1.9E-11 84.4 7.7 79 321-399 4-89 (336)
311 cd05615 STKc_cPKC_alpha Cataly 98.4 1.2E-06 2.7E-11 83.0 8.5 76 324-399 2-82 (323)
312 cd07831 STKc_MOK Catalytic dom 98.4 1.4E-06 3.1E-11 80.5 8.6 75 325-399 2-81 (282)
313 cd08217 STKc_Nek2 Catalytic do 98.4 1.9E-06 4E-11 78.7 9.3 76 324-399 2-82 (265)
314 cd07877 STKc_p38alpha_MAPK14 C 98.4 1.5E-06 3.3E-11 83.2 9.0 85 315-399 10-103 (345)
315 cd06636 STKc_MAP4K4_6 Catalyti 98.4 1.2E-06 2.7E-11 81.1 8.1 86 313-399 7-100 (282)
316 cd07852 STKc_MAPK15 Catalytic 98.4 9.4E-07 2E-11 84.3 7.5 79 321-399 6-90 (337)
317 PHA03207 serine/threonine kina 98.4 1.2E-06 2.5E-11 85.6 8.2 73 322-399 92-167 (392)
318 cd08215 STKc_Nek Catalytic dom 98.4 2.2E-06 4.7E-11 77.8 9.4 76 324-399 2-80 (258)
319 cd05060 PTKc_Syk_like Catalyti 98.3 1.9E-06 4E-11 78.7 8.9 71 328-399 1-76 (257)
320 PLN03224 probable serine/threo 98.3 7.9E-07 1.7E-11 88.7 6.8 80 320-399 143-266 (507)
321 KOG0660 Mitogen-activated prot 98.3 6E-07 1.3E-11 82.7 5.4 78 322-399 22-107 (359)
322 cd05572 STKc_cGK_PKG Catalytic 98.3 2E-06 4.3E-11 78.7 8.9 70 330-399 1-74 (262)
323 cd08226 PK_STRAD_beta Pseudoki 98.3 2.1E-06 4.5E-11 81.6 9.3 72 328-399 4-80 (328)
324 cd07854 STKc_MAPK4_6 Catalytic 98.3 9.5E-07 2.1E-11 84.5 6.9 78 322-399 5-97 (342)
325 cd05581 STKc_PDK1 Catalytic do 98.3 7.7E-07 1.7E-11 82.1 6.1 77 323-399 2-83 (280)
326 cd07830 STKc_MAK_like Catalyti 98.3 8E-07 1.7E-11 82.3 6.0 76 324-399 1-79 (283)
327 PTZ00283 serine/threonine prot 98.3 1.4E-06 3.1E-11 87.5 8.2 83 317-399 27-120 (496)
328 cd05083 PTKc_Chk Catalytic dom 98.3 1.2E-06 2.6E-11 79.8 6.9 73 323-399 7-79 (254)
329 cd08530 STKc_CNK2-like Catalyt 98.3 1.3E-06 2.8E-11 79.4 7.1 76 324-399 2-80 (256)
330 cd05579 STKc_MAST_like Catalyt 98.3 1.4E-06 3.1E-11 79.4 7.3 70 330-399 1-74 (265)
331 cd05082 PTKc_Csk Catalytic dom 98.3 2.1E-06 4.5E-11 78.3 8.4 74 323-399 7-81 (256)
332 cd07850 STKc_JNK Catalytic dom 98.3 2.2E-06 4.8E-11 82.3 8.9 79 321-399 15-102 (353)
333 KOG0579 Ste20-like serine/thre 98.3 5.1E-08 1.1E-12 95.5 -2.5 78 322-399 32-110 (1187)
334 cd05613 STKc_MSK1_N N-terminal 98.3 2.4E-06 5.2E-11 79.5 8.8 76 324-399 2-86 (290)
335 cd05111 PTK_HER3 Pseudokinase 98.3 2E-06 4.3E-11 79.7 8.1 76 323-399 8-89 (279)
336 cd07866 STKc_BUR1 Catalytic do 98.3 1.2E-06 2.5E-11 82.3 6.4 79 321-399 7-96 (311)
337 cd07863 STKc_CDK4 Catalytic do 98.3 2.1E-06 4.6E-11 79.7 8.0 76 324-399 2-88 (288)
338 cd05109 PTKc_HER2 Catalytic do 98.3 2.5E-06 5.4E-11 78.9 8.3 77 322-399 7-89 (279)
339 KOG4717 Serine/threonine prote 98.3 7E-07 1.5E-11 85.7 4.5 77 323-399 19-98 (864)
340 cd07855 STKc_ERK5 Catalytic do 98.3 1.4E-06 3E-11 83.0 6.7 78 322-399 5-89 (334)
341 cd05110 PTKc_HER4 Catalytic do 98.3 2.1E-06 4.5E-11 80.6 7.7 77 322-399 7-89 (303)
342 cd07834 STKc_MAPK Catalytic do 98.3 1.5E-06 3.2E-11 82.6 6.6 76 324-399 2-85 (330)
343 smart00221 STYKc Protein kinas 98.3 3.7E-06 8E-11 74.6 8.8 75 325-399 2-78 (225)
344 KOG0587 Traf2- and Nck-interac 98.3 2.4E-06 5.3E-11 86.9 8.1 87 312-399 9-102 (953)
345 cd08223 STKc_Nek4 Catalytic do 98.3 3.5E-06 7.7E-11 76.7 8.6 76 324-399 2-81 (257)
346 cd07858 STKc_TEY_MAPK_plant Ca 98.3 1.8E-06 3.9E-11 82.4 6.9 78 322-399 5-90 (337)
347 KOG0588 Serine/threonine prote 98.3 1.1E-06 2.4E-11 86.8 5.2 77 323-399 13-93 (786)
348 KOG1152 Signal transduction se 98.2 8.1E-07 1.8E-11 86.4 3.9 76 323-398 562-649 (772)
349 KOG0667 Dual-specificity tyros 98.2 1.8E-06 3.8E-11 85.3 6.3 76 323-399 187-269 (586)
350 cd07829 STKc_CDK_like Catalyti 98.2 1.6E-06 3.5E-11 80.0 5.7 75 325-399 2-79 (282)
351 cd07838 STKc_CDK4_6_like Catal 98.2 4.1E-06 8.9E-11 77.5 8.3 75 325-399 2-87 (287)
352 KOG1024 Receptor-like protein 98.2 1.4E-06 3.1E-11 81.1 4.8 84 315-398 277-368 (563)
353 cd05583 STKc_MSK_N N-terminal 98.2 3.1E-06 6.7E-11 78.7 7.2 76 324-399 2-86 (288)
354 PRK10345 hypothetical protein; 98.2 5.9E-06 1.3E-10 73.0 8.5 74 324-399 4-86 (210)
355 cd05586 STKc_Sck1_like Catalyt 98.2 5E-06 1.1E-10 79.0 8.7 70 330-399 1-77 (330)
356 cd05118 STKc_CMGC Catalytic do 98.2 3.1E-06 6.7E-11 78.2 6.7 75 325-399 2-79 (283)
357 KOG0666 Cyclin C-dependent kin 98.2 3.8E-07 8.3E-12 82.4 0.5 77 323-399 25-109 (438)
358 KOG0589 Serine/threonine prote 98.2 1.7E-06 3.6E-11 83.1 4.8 78 322-399 4-85 (426)
359 KOG4279 Serine/threonine prote 98.2 1.1E-06 2.3E-11 87.4 3.5 71 328-398 581-652 (1226)
360 cd08222 STKc_Nek11 Catalytic d 98.2 1.9E-06 4.2E-11 78.7 4.8 76 324-399 2-83 (260)
361 PHA03210 serine/threonine kina 98.2 2.6E-06 5.7E-11 85.8 6.0 77 322-399 148-244 (501)
362 KOG0033 Ca2+/calmodulin-depend 98.1 6.5E-08 1.4E-12 84.5 -5.0 78 322-399 11-91 (355)
363 cd07851 STKc_p38 Catalytic dom 98.1 2.4E-06 5.3E-11 81.7 5.2 80 320-399 13-101 (343)
364 cd05123 STKc_AGC Catalytic dom 98.1 5.4E-06 1.2E-10 75.0 7.1 70 330-399 1-74 (250)
365 KOG0610 Putative serine/threon 98.1 3.8E-06 8.3E-11 78.8 5.8 77 323-399 78-158 (459)
366 cd05611 STKc_Rim15_like Cataly 98.1 1.5E-05 3.3E-10 72.7 9.2 72 328-399 2-78 (260)
367 KOG2345 Serine/threonine prote 98.1 9E-07 2E-11 77.7 0.4 83 317-399 16-104 (302)
368 cd08216 PK_STRAD Pseudokinase 98.1 9.9E-06 2.1E-10 76.3 7.3 71 328-399 8-80 (314)
369 KOG1006 Mitogen-activated prot 98.0 1.2E-06 2.7E-11 77.5 0.8 77 323-399 65-144 (361)
370 PTZ00284 protein kinase; Provi 98.0 1.3E-05 2.7E-10 80.2 8.1 82 317-399 124-213 (467)
371 cd05147 RIO1_euk RIO kinase fa 98.0 1.1E-05 2.3E-10 70.5 5.6 71 327-399 2-98 (190)
372 KOG0592 3-phosphoinositide-dep 98.0 6.7E-06 1.5E-10 79.7 4.6 78 322-399 73-155 (604)
373 cd07857 STKc_MPK1 Catalytic do 98.0 2.5E-05 5.4E-10 74.4 8.5 76 324-399 2-87 (332)
374 cd00180 PKc Catalytic domain o 98.0 4.3E-05 9.4E-10 66.4 9.3 70 330-399 1-72 (215)
375 cd05633 STKc_GRK3 Catalytic do 98.0 4E-05 8.7E-10 71.0 9.2 71 329-399 1-78 (279)
376 KOG0576 Mitogen-activated prot 97.9 9.3E-07 2E-11 87.4 -2.1 81 319-399 12-93 (829)
377 KOG0596 Dual specificity; seri 97.9 7.8E-06 1.7E-10 79.4 4.2 78 322-399 361-441 (677)
378 cd05606 STKc_beta_ARK Catalyti 97.9 5.7E-05 1.2E-09 69.9 8.7 71 329-399 1-78 (278)
379 PRK09605 bifunctional UGMP fam 97.9 8.9E-05 1.9E-09 75.4 10.5 77 322-399 333-417 (535)
380 cd05145 RIO1_like RIO kinase f 97.8 5.4E-05 1.2E-09 66.0 7.6 71 327-399 2-98 (190)
381 KOG0668 Casein kinase II, alph 97.8 2.7E-06 5.9E-11 73.8 -0.7 76 321-399 37-116 (338)
382 smart00220 S_TKc Serine/Threon 97.8 5.2E-05 1.1E-09 67.7 7.4 66 334-399 1-68 (244)
383 PRK14879 serine/threonine prot 97.8 5.9E-05 1.3E-09 66.7 7.3 71 328-399 2-80 (211)
384 PHA03390 pk1 serine/threonine- 97.8 0.00012 2.6E-09 67.3 8.7 73 322-399 14-90 (267)
385 KOG0690 Serine/threonine prote 97.7 1.8E-05 3.8E-10 72.2 2.8 78 322-399 168-249 (516)
386 PRK10359 lipopolysaccharide co 97.7 7.7E-05 1.7E-09 66.5 6.3 78 321-399 30-124 (232)
387 TIGR03724 arch_bud32 Kae1-asso 97.7 8.8E-05 1.9E-09 65.0 6.6 70 329-399 1-78 (199)
388 KOG4645 MAPKKK (MAP kinase kin 97.6 9.8E-06 2.1E-10 85.8 -1.2 79 321-399 1234-1315(1509)
389 KOG0612 Rho-associated, coiled 97.6 1.2E-05 2.5E-10 84.2 -0.9 86 314-399 67-156 (1317)
390 cd05144 RIO2_C RIO kinase fami 97.4 0.00044 9.5E-09 60.6 7.5 72 324-399 17-112 (198)
391 KOG1290 Serine/threonine prote 97.4 0.00028 6.1E-09 67.9 6.3 77 322-399 78-167 (590)
392 KOG0584 Serine/threonine prote 97.4 9.2E-05 2E-09 73.1 2.4 75 324-398 42-123 (632)
393 KOG0669 Cyclin T-dependent kin 97.4 2.6E-06 5.5E-11 75.0 -7.6 77 323-399 18-105 (376)
394 PHA02882 putative serine/threo 97.3 0.00081 1.7E-08 62.8 8.2 77 322-398 12-107 (294)
395 KOG1151 Tousled-like protein k 97.3 7.5E-05 1.6E-09 70.9 0.9 77 323-399 464-549 (775)
396 cd05120 APH_ChoK_like Aminogly 97.3 0.0006 1.3E-08 56.1 6.3 70 327-399 3-74 (155)
397 KOG1167 Serine/threonine prote 97.2 0.00018 3.9E-09 67.9 2.5 78 320-399 34-116 (418)
398 cd05576 STKc_RPK118_like Catal 97.2 0.00075 1.6E-08 60.8 6.4 62 333-399 4-66 (237)
399 smart00090 RIO RIO-like kinase 97.2 0.001 2.2E-08 60.2 6.8 73 323-399 29-129 (237)
400 KOG1027 Serine/threonine prote 97.1 0.0003 6.5E-09 71.8 3.1 72 324-399 511-584 (903)
401 cd05119 RIO RIO kinase family, 96.9 0.0023 5E-08 55.2 6.2 31 327-357 2-32 (187)
402 KOG0696 Serine/threonine prote 96.8 0.00017 3.7E-09 68.0 -1.3 78 322-399 349-431 (683)
403 KOG0984 Mitogen-activated prot 96.8 0.00097 2.1E-08 57.5 3.2 80 319-398 43-125 (282)
404 KOG0608 Warts/lats-like serine 96.8 0.00081 1.8E-08 66.8 3.0 78 322-399 629-710 (1034)
405 KOG1163 Casein kinase (serine/ 96.8 0.0011 2.5E-08 58.3 3.6 76 322-399 15-92 (341)
406 PLN03225 Serine/threonine-prot 96.7 0.0021 4.6E-08 65.7 5.3 38 320-357 130-172 (566)
407 KOG0983 Mitogen-activated prot 96.6 0.0014 3.1E-08 58.8 2.9 74 325-398 95-171 (391)
408 TIGR01982 UbiB 2-polyprenylphe 96.5 0.0045 9.8E-08 61.2 5.9 31 327-357 122-152 (437)
409 KOG0664 Nemo-like MAPK-related 96.5 0.0012 2.5E-08 59.2 1.6 65 324-388 55-122 (449)
410 KOG0599 Phosphorylase kinase g 96.5 0.0012 2.5E-08 59.3 1.4 78 322-399 17-104 (411)
411 COG0515 SPS1 Serine/threonine 96.3 0.019 4.1E-07 53.0 8.5 74 324-399 2-79 (384)
412 KOG0986 G protein-coupled rece 96.3 0.002 4.3E-08 61.7 1.7 77 322-398 185-265 (591)
413 PRK12274 serine/threonine prot 96.2 0.018 3.8E-07 50.7 7.3 69 326-399 6-79 (218)
414 KOG1164 Casein kinase (serine/ 96.2 0.0093 2E-07 56.5 5.9 77 323-399 19-102 (322)
415 PRK04750 ubiB putative ubiquin 96.0 0.0046 9.9E-08 62.3 3.1 35 322-357 120-155 (537)
416 KOG0670 U4/U6-associated splic 95.9 0.0052 1.1E-07 59.9 2.7 75 323-398 433-514 (752)
417 KOG0695 Serine/threonine prote 95.7 0.0044 9.6E-08 57.1 1.3 78 322-399 250-332 (593)
418 KOG0195 Integrin-linked kinase 95.6 0.0018 3.9E-08 58.0 -1.6 72 327-399 195-268 (448)
419 KOG0671 LAMMER dual specificit 95.6 0.0074 1.6E-07 56.6 2.2 77 321-398 88-171 (415)
420 KOG1165 Casein kinase (serine/ 95.2 0.021 4.5E-07 52.9 4.0 75 322-398 28-104 (449)
421 KOG0603 Ribosomal protein S6 k 95.0 0.013 2.8E-07 58.5 2.2 75 321-399 321-397 (612)
422 KOG0604 MAP kinase-activated p 94.7 0.01 2.2E-07 54.1 0.5 67 328-399 68-140 (400)
423 PF04478 Mid2: Mid2 like cell 94.7 0.048 1E-06 44.5 4.2 30 264-293 49-78 (154)
424 cd05154 ACAD10_11_like Acyl-Co 94.5 0.08 1.7E-06 46.7 5.7 72 328-399 4-81 (223)
425 PRK01723 3-deoxy-D-manno-octul 94.3 0.14 3.1E-06 46.2 6.9 72 327-399 36-127 (239)
426 KOG1345 Serine/threonine kinas 93.8 0.031 6.8E-07 50.4 1.7 77 322-399 24-103 (378)
427 PF03109 ABC1: ABC1 family; I 93.2 0.037 8E-07 44.1 0.9 31 327-357 16-46 (119)
428 cd05151 ChoK Choline Kinase (C 93.2 0.17 3.6E-06 42.6 5.1 68 328-399 4-72 (170)
429 KOG1166 Mitotic checkpoint ser 92.9 0.043 9.3E-07 58.5 1.3 76 321-399 697-775 (974)
430 KOG0614 cGMP-dependent protein 92.3 0.012 2.6E-07 57.4 -3.5 77 322-398 420-500 (732)
431 PF15102 TMEM154: TMEM154 prot 92.1 0.53 1.1E-05 38.3 6.1 15 264-278 56-70 (146)
432 PF01102 Glycophorin_A: Glycop 92.0 0.064 1.4E-06 42.5 0.9 31 264-294 64-94 (122)
433 COG2112 Predicted Ser/Thr prot 91.9 0.27 5.9E-06 41.9 4.6 55 325-382 25-79 (201)
434 PTZ00382 Variant-specific surf 91.4 0.23 4.9E-06 37.8 3.2 32 261-292 63-94 (96)
435 KOG1243 Protein kinase [Genera 91.2 0.29 6.4E-06 49.7 4.8 55 344-398 35-89 (690)
436 KOG1033 eIF-2alpha kinase PEK/ 88.9 0.098 2.1E-06 51.4 -0.7 71 320-390 47-119 (516)
437 KOG0665 Jun-N-terminal kinase 87.2 0.17 3.6E-06 46.8 -0.3 74 325-399 20-102 (369)
438 KOG4258 Insulin/growth factor 85.4 0.45 9.7E-06 49.4 1.7 32 312-344 985-1016(1025)
439 KOG3741 Poly(A) ribonuclease s 84.2 1.4 3E-05 43.9 4.3 64 336-399 290-358 (655)
440 COG0661 AarF Predicted unusual 83.3 1.2 2.6E-05 44.9 3.7 31 327-357 130-160 (517)
441 PF13095 FTA2: Kinetochore Sim 83.2 2.7 5.8E-05 36.8 5.3 66 322-388 37-129 (207)
442 PF02480 Herpes_gE: Alphaherpe 81.6 0.45 9.8E-06 46.8 0.0 12 180-191 239-250 (439)
443 PF10707 YrbL-PhoP_reg: PhoP r 81.6 7.1 0.00015 34.1 7.4 72 325-398 4-97 (199)
444 PF06697 DUF1191: Protein of u 78.1 2.9 6.3E-05 38.2 4.0 8 29-36 12-19 (278)
445 PF01034 Syndecan: Syndecan do 74.9 0.95 2.1E-05 31.2 -0.0 7 268-274 13-19 (64)
446 PLN02876 acyl-CoA dehydrogenas 74.3 8.5 0.00018 41.6 7.0 73 327-399 43-125 (822)
447 PRK10593 hypothetical protein; 73.3 14 0.0003 34.5 7.4 73 324-399 16-94 (297)
448 PF03302 VSP: Giardia variant- 69.9 4.7 0.0001 39.3 3.5 33 260-292 363-395 (397)
449 PF13908 Shisa: Wnt and FGF in 68.7 8.3 0.00018 33.0 4.4 6 219-224 33-38 (179)
450 PF12877 DUF3827: Domain of un 68.4 8.8 0.00019 39.1 5.0 29 57-85 78-106 (684)
451 PF15345 TMEM51: Transmembrane 67.6 12 0.00027 33.0 5.2 26 262-288 56-81 (233)
452 PF02009 Rifin_STEVOR: Rifin/s 67.3 2 4.3E-05 40.0 0.3 14 28-41 35-48 (299)
453 PF05454 DAG1: Dystroglycan (D 67.1 1.8 3.9E-05 39.9 0.0 10 194-203 64-73 (290)
454 COG0478 RIO-like serine/threon 67.1 20 0.00043 33.0 6.6 70 326-399 95-188 (304)
455 PF01299 Lamp: Lysosome-associ 67.1 2.3 4.9E-05 40.0 0.7 31 264-294 270-300 (306)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 66.2 17 0.00037 32.4 6.1 67 328-399 7-75 (226)
457 PF14610 DUF4448: Protein of u 65.9 11 0.00024 32.6 4.7 21 263-283 156-176 (189)
458 cd05146 RIO3_euk RIO kinase fa 63.7 27 0.00058 30.5 6.6 68 328-399 3-105 (197)
459 PF01636 APH: Phosphotransfera 63.1 23 0.00051 30.8 6.5 69 328-399 3-76 (239)
460 PRK09550 mtnK methylthioribose 62.8 34 0.00074 33.4 7.9 70 328-399 32-112 (401)
461 PF08374 Protocadherin: Protoc 61.5 9 0.00019 33.4 3.2 20 264-283 38-57 (221)
462 KOG0601 Cyclin-dependent kinas 60.0 4.8 0.0001 40.4 1.5 76 324-399 116-199 (524)
463 TIGR01478 STEVOR variant surfa 58.5 6.8 0.00015 35.7 2.0 11 29-39 59-69 (295)
464 PF01163 RIO1: RIO1 family; I 57.4 45 0.00098 28.8 6.9 59 337-399 1-87 (188)
465 PTZ00370 STEVOR; Provisional 57.0 7.5 0.00016 35.5 2.0 11 29-39 58-68 (296)
466 PF12768 Rax2: Cortical protei 56.7 20 0.00042 33.2 4.8 25 259-283 222-246 (281)
467 PF14531 Kinase-like: Kinase-l 55.7 18 0.0004 33.5 4.5 52 324-375 14-69 (288)
468 PF05393 Hum_adeno_E3A: Human 55.7 8.3 0.00018 28.3 1.7 22 273-294 39-60 (94)
469 PTZ00046 rifin; Provisional 55.3 5.2 0.00011 37.9 0.8 10 80-89 131-140 (358)
470 KOG1235 Predicted unusual prot 54.9 20 0.00043 36.4 4.9 31 327-357 166-196 (538)
471 TIGR01477 RIFIN variant surfac 54.8 5.3 0.00012 37.7 0.8 17 80-96 134-153 (353)
472 PF14991 MLANA: Protein melan- 52.5 4.1 8.8E-05 31.5 -0.3 19 274-292 32-50 (118)
473 PHA03265 envelope glycoprotein 52.4 10 0.00022 35.6 2.1 29 265-293 348-376 (402)
474 cd05150 APH Aminoglycoside 3'- 52.1 43 0.00094 29.8 6.3 66 330-399 6-73 (244)
475 KOG1240 Protein kinase contain 49.0 15 0.00033 40.3 3.0 61 323-384 24-87 (1431)
476 PF12273 RCR: Chitin synthesis 49.0 13 0.00029 29.9 2.1 7 291-297 22-28 (130)
477 PF06809 NPDC1: Neural prolife 48.8 39 0.00084 31.4 5.2 15 27-41 13-27 (341)
478 PF02480 Herpes_gE: Alphaherpe 48.4 5.9 0.00013 39.1 0.0 6 193-198 213-218 (439)
479 PF03881 Fructosamin_kin: Fruc 47.8 69 0.0015 29.8 7.0 72 324-399 19-93 (288)
480 PHA03281 envelope glycoprotein 47.2 63 0.0014 32.4 6.7 12 328-339 622-633 (642)
481 PF15069 FAM163: FAM163 family 46.1 24 0.00052 28.7 3.1 9 346-354 111-119 (143)
482 COG3889 Predicted solute bindi 46.0 28 0.0006 36.4 4.2 8 175-182 728-735 (872)
483 COG3642 Mn2+-dependent serine/ 45.9 76 0.0017 27.6 6.3 71 328-399 2-80 (204)
484 PF05568 ASFV_J13L: African sw 45.4 13 0.00028 30.1 1.5 25 269-294 34-58 (189)
485 PF15050 SCIMP: SCIMP protein 45.0 8.1 0.00017 30.2 0.3 10 375-384 102-111 (133)
486 TIGR03154 sulfolob_CbsA cytoch 44.6 29 0.00063 32.6 3.8 17 264-280 440-456 (465)
487 KOG3087 Serine/threonine prote 43.6 73 0.0016 27.8 5.8 73 326-399 11-91 (229)
488 PF04689 S1FA: DNA binding pro 41.7 55 0.0012 22.5 3.8 30 259-288 8-37 (69)
489 PF15102 TMEM154: TMEM154 prot 41.6 13 0.00028 30.4 1.0 7 263-269 58-64 (146)
490 PF01102 Glycophorin_A: Glycop 39.5 16 0.00035 29.1 1.2 32 267-298 64-95 (122)
491 PF07213 DAP10: DAP10 membrane 38.8 27 0.00058 25.3 2.1 14 280-293 49-62 (79)
492 PF05510 Sarcoglycan_2: Sarcog 38.6 24 0.00052 34.0 2.4 11 216-226 234-244 (386)
493 KOG0603 Ribosomal protein S6 k 37.5 6.4 0.00014 40.0 -1.6 71 329-399 1-78 (612)
494 PF15330 SIT: SHP2-interacting 35.3 20 0.00043 27.9 1.1 33 265-297 1-33 (107)
495 KOG0590 Checkpoint kinase and 34.4 9.5 0.00021 39.5 -1.0 76 324-399 22-102 (601)
496 PF11857 DUF3377: Domain of un 34.4 74 0.0016 22.8 3.7 35 258-292 23-57 (74)
497 PHA03283 envelope glycoprotein 34.1 50 0.0011 33.0 3.8 56 242-297 376-431 (542)
498 PF05545 FixQ: Cbb3-type cytoc 34.0 39 0.00084 21.9 2.2 26 270-295 12-37 (49)
499 PF03229 Alpha_GJ: Alphavirus 31.6 1.1E+02 0.0023 24.0 4.5 66 230-295 48-113 (126)
500 PHA03099 epidermal growth fact 30.8 37 0.00079 27.1 1.9 47 254-300 89-135 (139)
No 1
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.92 E-value=6.5e-25 Score=172.77 Aligned_cols=100 Identities=42% Similarity=0.814 Sum_probs=77.8
Q ss_pred ccCC-C-CCcc-cCCChHHHHHHHHHHHhhhccCCC--CCeeeeeecCCCceEEEEEEccCCCChhhHHHHHHHHHHHHh
Q 044262 12 QTCY-D-TGNF-TTNSTYGKNRDLFLSSLASNVTAN--KGFYTSTIGQIPDAVYGLALCRGDSTPESCASCLNFTVRDMM 86 (399)
Q Consensus 12 ~~c~-~-~~~~-~~~~~~~~~l~~ll~~l~~~a~~~--~~f~~~~~~~~~~~vygl~~C~~d~~~~~C~~Cl~~a~~~~~ 86 (399)
+.|+ + ..++ +++++|++||+.||++|.++++.. .+|++++.|.++++||||+||++|+++.+|..||+.|+..+.
T Consensus 2 ~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~ 81 (106)
T PF01657_consen 2 HFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANIS 81 (106)
T ss_dssp --E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHH
T ss_pred CcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHH
Confidence 4688 4 3456 578889999999999999987654 579999988889999999999999999999999999999999
Q ss_pred hcCCCCccEEEEeCCCCCeEEEEccccc
Q 044262 87 KNCPNQKEAISWGGMDFPCVVRYSNRSF 114 (399)
Q Consensus 87 ~~C~~~~~~~~~~~~~~~C~~ry~~~~f 114 (399)
+.|+..++|+||++. |+|||++++|
T Consensus 82 ~~C~~~~g~~v~~~~---C~lRY~~~~F 106 (106)
T PF01657_consen 82 SCCPGSRGGRVWYDS---CFLRYENYPF 106 (106)
T ss_dssp HHTTSBSSEEEEESS---EEEEEESS--
T ss_pred HhCCCCceEEEECCC---EEEEEECCCC
Confidence 999999999999999 9999999998
No 2
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function. The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.
Probab=99.84 E-value=5.8e-21 Score=150.26 Aligned_cols=93 Identities=39% Similarity=0.777 Sum_probs=76.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhcCCCCcceeeeecccCCCcceEEEeccCCCCChHhHHHHHHHHHHhhhhhcCCCCce
Q 044262 133 TSSLTQFDRIWRSLMDRVLAKASSGNSKLKFATEEANLTSSETIYALMQCTPDISQSDCEFCLRQSMADLQSCCYGKKGS 212 (399)
Q Consensus 133 ~~~~~~f~~~~~~ll~~l~~~a~~~~~~~~fa~~~~~~~~~~~vy~l~qC~~dl~~~~C~~Cl~~a~~~~~~~c~~~~g~ 212 (399)
+.+ ..|+.++..||..|+..++... +.+|++++.+ .++++||||+||++||+++||..||..++..+..+|+++.|+
T Consensus 14 ~~~-~~f~~~l~~ll~~l~~~a~~~~-~~~f~~~~~~-~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~ 90 (106)
T PF01657_consen 14 TDN-STFEQNLNSLLSSLVSNAASSS-SKGFATGSAG-SGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGG 90 (106)
T ss_dssp -TT--THHHHHHHHHHHHHHHGGGTT--TEEEEEE---ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSE
T ss_pred CCC-chHHHHHHHHHHHHHHHHhhcc-ccCcEEeecC-CCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceE
Confidence 344 4599999999999999988654 5799999875 678899999999999999999999999999999999999999
Q ss_pred eEeCcccccccccccc
Q 044262 213 YVLGPSCIFRWEMYPF 228 (399)
Q Consensus 213 ~v~~~~C~~r~~~~~f 228 (399)
+|+++.|++||+.++|
T Consensus 91 ~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 91 RVWYDSCFLRYENYPF 106 (106)
T ss_dssp EEEESSEEEEEESS--
T ss_pred EEECCCEEEEEECCCC
Confidence 9999999999999987
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.65 E-value=5.1e-16 Score=148.41 Aligned_cols=92 Identities=58% Similarity=0.943 Sum_probs=82.9
Q ss_pred cccccChhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262 308 ESLQFDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFS 387 (399)
Q Consensus 308 ~~~~~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~ 387 (399)
....|++.++..+|++|+..++||+|+||.||+|.+++++.||||++.....+..++|.+|+.++.+++|||||+|+|+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 44568999999999999999999999999999999999999999998765433145699999999999999999999999
Q ss_pred EeCC-eEEEEEeC
Q 044262 388 FEGT-ERLLIYEF 399 (399)
Q Consensus 388 ~~~~-~~~lv~Ey 399 (399)
.+.+ +.+|||||
T Consensus 141 ~e~~~~~~LVYEy 153 (361)
T KOG1187|consen 141 LEGGEHRLLVYEY 153 (361)
T ss_pred ecCCceEEEEEEc
Confidence 9988 59999998
No 4
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.53 E-value=2.6e-14 Score=143.31 Aligned_cols=85 Identities=32% Similarity=0.556 Sum_probs=73.7
Q ss_pred hhHHhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFS 387 (399)
Q Consensus 315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~ 387 (399)
...+..+.++...+.||+|.||+||+|+.. +.+.||||.|++.... ...+|.+|+++|.+++|||||+|+|+|
T Consensus 479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 344556677778899999999999999863 2457999999887544 678999999999999999999999999
Q ss_pred EeCCeEEEEEeC
Q 044262 388 FEGTERLLIYEF 399 (399)
Q Consensus 388 ~~~~~~~lv~Ey 399 (399)
.++++++||+||
T Consensus 559 ~~~~P~~MvFEY 570 (774)
T KOG1026|consen 559 REGDPLCMVFEY 570 (774)
T ss_pred ccCCeeEEEEEe
Confidence 999999999998
No 5
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.46 E-value=1.8e-13 Score=128.71 Aligned_cols=75 Identities=31% Similarity=0.550 Sum_probs=61.2
Q ss_pred cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHh--cCCCCCccceeEEEEeCC----eEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVA--RLQHRNLVRLLGFSFEGT----ERL 394 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~--~l~H~niv~l~g~~~~~~----~~~ 394 (399)
...+...++||+|+||.||||++ +++.||||++.. +....|++|-.+.. .++|+||+++++.-..++ +.+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 34566779999999999999999 568999999854 34456777766544 679999999999987766 799
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
||+||
T Consensus 285 LVt~f 289 (534)
T KOG3653|consen 285 LVTEF 289 (534)
T ss_pred EEeee
Confidence 99997
No 6
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.41 E-value=4e-13 Score=129.24 Aligned_cols=81 Identities=27% Similarity=0.458 Sum_probs=72.0
Q ss_pred hhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
.++..+...++||+|.||.|...+...+..||||+++... ...+++|.+|+++|.+++|||||+|+|+|..++++++|+
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 3445566789999999999999999777999999998764 444589999999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 615 EY 616 (807)
T KOG1094|consen 615 EY 616 (807)
T ss_pred HH
Confidence 97
No 7
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.41 E-value=2.3e-13 Score=134.81 Aligned_cols=78 Identities=26% Similarity=0.497 Sum_probs=69.5
Q ss_pred CCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
..+.++++||.|.||.|++|.++- ...||||.|+.. .++.+.+|+.|..+|.+++||||++|.|+.....+.+||
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 345678999999999999999853 457999999987 556677999999999999999999999999999999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
.||
T Consensus 709 TEy 711 (996)
T KOG0196|consen 709 TEY 711 (996)
T ss_pred hhh
Confidence 998
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.39 E-value=1.1e-12 Score=121.46 Aligned_cols=78 Identities=29% Similarity=0.526 Sum_probs=69.4
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.+|...+.||+|.|+.||+|.++. +..||||.+... ..+..+-+..|+.+|++++|||||+|+.++..++..+||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 456667789999999999999854 789999999765 55666778999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 90 y 90 (429)
T KOG0595|consen 90 Y 90 (429)
T ss_pred e
Confidence 8
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.25 E-value=4e-12 Score=121.72 Aligned_cols=83 Identities=24% Similarity=0.444 Sum_probs=71.3
Q ss_pred hHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
.++...+.+...+.||+|.||.||.|.++....||+|.++... ...++|.+|+.+|.+|+|+|||+|+|+|..+++++|
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEE
Confidence 3444455566678999999999999999777799999998753 334689999999999999999999999999899999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 279 VtE~ 282 (468)
T KOG0197|consen 279 VTEY 282 (468)
T ss_pred EEEe
Confidence 9998
No 10
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.23 E-value=1.9e-11 Score=118.66 Aligned_cols=85 Identities=28% Similarity=0.457 Sum_probs=71.7
Q ss_pred hhHHhhcCCCcccCcccccCceEEEEEEEcCC-----cEEEEEEecC---CChhhHHHHHHHHHHHhcCCCCCccceeEE
Q 044262 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSHG-----QEIAVKRLSK---NSVQGELEFKNEVLLVARLQHRNLVRLLGF 386 (399)
Q Consensus 315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g-----~~vavK~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~ 386 (399)
..++...+++...++||+|+||.||+|.+..+ ..||||..+. .......+|++|.++|++++|||||+|+|+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 44555566777779999999999999998542 2389999875 245667899999999999999999999999
Q ss_pred EEeCCeEEEEEeC
Q 044262 387 SFEGTERLLIYEF 399 (399)
Q Consensus 387 ~~~~~~~~lv~Ey 399 (399)
+....+++||||+
T Consensus 230 a~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 230 AVLEEPLMLVMEL 242 (474)
T ss_pred EcCCCccEEEEEe
Confidence 9999999999996
No 11
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=1.9e-11 Score=114.40 Aligned_cols=74 Identities=24% Similarity=0.500 Sum_probs=60.8
Q ss_pred CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhc--CCCCCccceeEEEEeC----CeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVAR--LQHRNLVRLLGFSFEG----TERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~l 395 (399)
..+...+.||+|.||.||+|.+ .|+.||||++...++ ..|.+|.++... |+|+||+.|++.-..+ .++||
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeeccc-cCCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 4566789999999999999999 789999999976543 367777777664 6999999999987654 35899
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|.||
T Consensus 287 vTdY 290 (513)
T KOG2052|consen 287 VTDY 290 (513)
T ss_pred eeec
Confidence 9998
No 12
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.18 E-value=2.1e-10 Score=124.72 Aligned_cols=75 Identities=28% Similarity=0.490 Sum_probs=62.9
Q ss_pred cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
...+...++||+|+||.||+|.. .++..||||+++..... ...|++.|++++|||||+++|++..++..+|||||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 34567788999999999999997 46889999998654321 23468889999999999999999999999999998
No 13
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.17 E-value=4.3e-11 Score=114.05 Aligned_cols=74 Identities=32% Similarity=0.624 Sum_probs=63.1
Q ss_pred cccCcccccCceEEEEEEEcCCcE-EEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-eEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLSHGQE-IAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-ERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~g~~-vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey 399 (399)
...+.||+|+||+||+|.+. |+. ||||.+..... ...++|.+|+.+|.+++|||||+|+|+|.++. .+.|||||
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred hhhhhcccCCceeEEEEEeC-CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 34466999999999999994 555 99999976532 22568999999999999999999999999887 79999998
No 14
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.16 E-value=6.7e-11 Score=123.16 Aligned_cols=80 Identities=35% Similarity=0.633 Sum_probs=70.2
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC--C----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH--G----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE 392 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~--g----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 392 (399)
+.+++.....||+|.||.||+|.+.+ + ..||||.+++. +.+...+|++|..+|++++|||||+|+|+|....+
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 35667778999999999999999854 3 24999999876 56667899999999999999999999999999999
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.+|++||
T Consensus 770 ~~i~ley 776 (1025)
T KOG1095|consen 770 PLILLEY 776 (1025)
T ss_pred cEEEehh
Confidence 9999997
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=6e-11 Score=112.80 Aligned_cols=77 Identities=26% Similarity=0.489 Sum_probs=65.4
Q ss_pred CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIY 397 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 397 (399)
.|+..++||+|.||.|||+.- ..|..||+|++.-.. ........+||.+|++|+||||++|.+...+. ..+|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 456678999999999999985 468999999986543 34455678999999999999999999998876 6799999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 198 eY 199 (560)
T KOG0600|consen 198 EY 199 (560)
T ss_pred ec
Confidence 98
No 16
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.12 E-value=3.1e-11 Score=107.93 Aligned_cols=76 Identities=26% Similarity=0.441 Sum_probs=66.3
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+...++|+|+||.|||...++ |+.||||++..... .-.+-.++||++|++++|+|||.|+.+|.....++||+||
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 4556789999999999999866 89999999976533 3345689999999999999999999999999999999998
No 17
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.11 E-value=4.8e-11 Score=119.18 Aligned_cols=74 Identities=39% Similarity=0.610 Sum_probs=59.7
Q ss_pred CcccCcccccCceEEEEEEE-cCC----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRL-SHG----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~-~~g----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
+...++||+|+||.||||.+ +.| .+||+|.+... ..+..++++.|+..|.+++||||++|+|+|.... +.||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34568999999999999987 333 36999998765 4556679999999999999999999999997654 44444
Q ss_pred e
Q 044262 398 E 398 (399)
Q Consensus 398 E 398 (399)
+
T Consensus 777 q 777 (1177)
T KOG1025|consen 777 Q 777 (1177)
T ss_pred H
Confidence 3
No 18
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.10 E-value=4.8e-11 Score=115.84 Aligned_cols=84 Identities=30% Similarity=0.493 Sum_probs=73.4
Q ss_pred hhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER 393 (399)
Q Consensus 315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 393 (399)
++++-.+.++...++||-|.||.||.|.|+. ...||||.|+... ...++|+.|..+|+.++|||+|+|+|+|....+.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 4455556667788999999999999999975 6789999997643 4467999999999999999999999999999999
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
|||+||
T Consensus 339 YIiTEf 344 (1157)
T KOG4278|consen 339 YIITEF 344 (1157)
T ss_pred EEEEec
Confidence 999997
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.08 E-value=1.5e-10 Score=101.81 Aligned_cols=77 Identities=27% Similarity=0.518 Sum_probs=66.2
Q ss_pred CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChh--hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.|...++||+|.||.||+|.- ..|+.||||+++..... -....++||+.|++++|+||+.|++++...+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 355678999999999999985 45899999999876332 235689999999999999999999999999999999997
No 20
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=6.8e-11 Score=102.52 Aligned_cols=79 Identities=32% Similarity=0.532 Sum_probs=68.7
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
.++|.+++.||+|.||.||.+..+. +-.||+|.+.+.. .+...++.+|+++-..|+||||++++|++.+....+|+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 3568889999999999999998754 6789999997642 23346799999999999999999999999999999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 101 lEy 103 (281)
T KOG0580|consen 101 LEY 103 (281)
T ss_pred EEe
Confidence 998
No 21
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.05 E-value=2.5e-10 Score=111.01 Aligned_cols=81 Identities=22% Similarity=0.459 Sum_probs=66.6
Q ss_pred HhhcCCCcccCcccccCceEEEEEEEcC---C--cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262 318 RDATNNFSTDNKLGQGGFGAVYKGRLSH---G--QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT 391 (399)
Q Consensus 318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~---g--~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 391 (399)
+..++.+...++||+|.||.||+|.+.+ | .-||||.-+.. .....+.|+.|..+|++++|||||+|+|+|. ..
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~ 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQ 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-cc
Confidence 3445566778999999999999999733 3 35899998764 4455778999999999999999999999995 56
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
+.|||||.
T Consensus 464 P~WivmEL 471 (974)
T KOG4257|consen 464 PMWIVMEL 471 (974)
T ss_pred ceeEEEec
Confidence 78999984
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.05 E-value=1.3e-10 Score=111.91 Aligned_cols=78 Identities=27% Similarity=0.451 Sum_probs=68.4
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
++|...+.||+|.||.||||.-+. .+.||+|.+.+. .++..+...+|++++++++|||||.++.++....++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 356677899999999999998764 678999999775 44556679999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (808)
T KOG0597|consen 82 Y 82 (808)
T ss_pred h
Confidence 7
No 23
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=5.2e-10 Score=104.07 Aligned_cols=78 Identities=24% Similarity=0.459 Sum_probs=65.2
Q ss_pred CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChh-------hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQ-------GELEFKNEVLLVARLQHRNLVRLLGFSFEGTER 393 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~-------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 393 (399)
+.+...+.||+|+||.|-+|.- +.|+.||||.+.+.... ......+|+++|.+|+|||||++.+++..++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 4456679999999999999975 45899999999764211 122357999999999999999999999999999
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
||||||
T Consensus 252 YmVlE~ 257 (475)
T KOG0615|consen 252 YMVLEY 257 (475)
T ss_pred EEEEEE
Confidence 999997
No 24
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=1.1e-09 Score=106.48 Aligned_cols=78 Identities=26% Similarity=0.466 Sum_probs=69.3
Q ss_pred CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
..|...+.||+|+|..+|++.- ..|+.||+|++.+. .....+...+||++.+.|+|||||+|++++.+.+..|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4577789999999999999997 67999999999764 3345667999999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
|+
T Consensus 98 EL 99 (592)
T KOG0575|consen 98 EL 99 (592)
T ss_pred Ee
Confidence 95
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.93 E-value=1.1e-09 Score=106.37 Aligned_cols=82 Identities=26% Similarity=0.483 Sum_probs=68.1
Q ss_pred hhhHHhhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262 314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT 391 (399)
Q Consensus 314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 391 (399)
.+++++..+.+...+.||+|.||+||+|.+.+ .||||.|... ..+..+.|.+|+..+++.+|.||+-|.|+|.++.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 35566666777788999999999999999943 5999999764 4456778999999999999999999999998776
Q ss_pred eEEEEEe
Q 044262 392 ERLLIYE 398 (399)
Q Consensus 392 ~~~lv~E 398 (399)
. .||+-
T Consensus 462 ~-AIiTq 467 (678)
T KOG0193|consen 462 L-AIITQ 467 (678)
T ss_pred e-eeeeh
Confidence 5 66653
No 26
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.92 E-value=2.7e-09 Score=98.17 Aligned_cols=78 Identities=27% Similarity=0.498 Sum_probs=66.5
Q ss_pred CCCcccCcccccCceEEEEEEEc----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
++|...+.||+|+||.||+|.++ .+..||+|.++.. .......|.+|+..+.+++||||++++|++..++..+||
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45677899999999999999864 3568999998765 333445799999999999999999999999999999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 85 ~e~ 87 (266)
T cd05064 85 TEY 87 (266)
T ss_pred EEe
Confidence 997
No 27
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.90 E-value=3.4e-09 Score=103.56 Aligned_cols=84 Identities=25% Similarity=0.355 Sum_probs=69.2
Q ss_pred hHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCC-CCCccceeEEE
Q 044262 316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQ-HRNLVRLLGFS 387 (399)
Q Consensus 316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~ 387 (399)
.+....+.|...++||+|+||.||+|.... +..||||.++.. .....+.|++|+.+|.++. |||||+++|++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 344556778889999999999999998521 346999999754 3333467999999999996 99999999999
Q ss_pred EeCCeEEEEEeC
Q 044262 388 FEGTERLLIYEF 399 (399)
Q Consensus 388 ~~~~~~~lv~Ey 399 (399)
...+..+|||||
T Consensus 111 ~~~~~~~lv~Ey 122 (400)
T cd05105 111 TKSGPIYIITEY 122 (400)
T ss_pred ccCCceEEEEEe
Confidence 999999999997
No 28
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.89 E-value=6.7e-09 Score=95.55 Aligned_cols=83 Identities=25% Similarity=0.322 Sum_probs=72.2
Q ss_pred HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
++.+++++.....||+|+||.||+|... ++..|++|.+........+.+.+|+.++..++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 4556677777789999999999999865 467899999877666666789999999999999999999999999999999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+||
T Consensus 83 v~e~ 86 (268)
T cd06624 83 FMEQ 86 (268)
T ss_pred EEec
Confidence 9997
No 29
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.88 E-value=7.1e-09 Score=97.39 Aligned_cols=78 Identities=29% Similarity=0.476 Sum_probs=65.5
Q ss_pred CCCcccCcccccCceEEEEEEEcC-----------------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccce
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-----------------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRL 383 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-----------------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l 383 (399)
+.|...++||+|+||.||++..++ +..||+|.+... ......+|.+|+.+|.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 456677899999999999997532 236999998764 33445679999999999999999999
Q ss_pred eEEEEeCCeEEEEEeC
Q 044262 384 LGFSFEGTERLLIYEF 399 (399)
Q Consensus 384 ~g~~~~~~~~~lv~Ey 399 (399)
++++...+..+|||||
T Consensus 85 ~~~~~~~~~~~lv~e~ 100 (304)
T cd05096 85 LGVCVDEDPLCMITEY 100 (304)
T ss_pred EEEEecCCceEEEEec
Confidence 9999988999999997
No 30
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.88 E-value=4.3e-09 Score=96.55 Aligned_cols=74 Identities=36% Similarity=0.662 Sum_probs=62.4
Q ss_pred ccCcccccCceEEEEEEEc-----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 326 TDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 326 ~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+.||.|.||.||+|.+. .+..|+||.++.. .....+.|.+|++.+.+++||||++++|++...++.++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999986 2468999999654 344467899999999999999999999999988889999997
No 31
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.85 E-value=3.6e-09 Score=102.61 Aligned_cols=82 Identities=29% Similarity=0.432 Sum_probs=67.8
Q ss_pred HhhcCCCcccCcccccCceEEEEEEE------cCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262 318 RDATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFE 389 (399)
Q Consensus 318 ~~~~~~~~~~~~iG~G~fG~Vykg~~------~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 389 (399)
....++|...++||+|+||.||++.. ..+..||||.++... ....+.+.+|+.++..+ +||||++++|++..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34455788889999999999999974 124579999997542 33445789999999999 89999999999999
Q ss_pred CCeEEEEEeC
Q 044262 390 GTERLLIYEF 399 (399)
Q Consensus 390 ~~~~~lv~Ey 399 (399)
++..++||||
T Consensus 111 ~~~~~lv~E~ 120 (375)
T cd05104 111 GGPTLVITEY 120 (375)
T ss_pred CCcceeeehh
Confidence 9999999997
No 32
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.84 E-value=1.4e-09 Score=107.25 Aligned_cols=76 Identities=30% Similarity=0.569 Sum_probs=63.5
Q ss_pred CCcccCcccccCceEEEEEEEcC--Cc--EEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH--GQ--EIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~--g~--~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
.+...++||+|.||.|++|.|.. |. .||||.|+..... ...+|++|+.+|.+|+|+|+++|+|+... .+..||+
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 34456899999999999999853 43 6899999876443 56789999999999999999999999976 6778888
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
|+
T Consensus 190 EL 191 (1039)
T KOG0199|consen 190 EL 191 (1039)
T ss_pred hh
Confidence 74
No 33
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.83 E-value=1.2e-08 Score=99.10 Aligned_cols=77 Identities=21% Similarity=0.219 Sum_probs=66.0
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.|...+.||+|+||.||++... .++.+|+|.+... .......+.+|+.++.+++|+||+++++++...+..+||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 4667789999999999999874 4789999999653 22334578999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (381)
T cd05626 82 Y 82 (381)
T ss_pred c
Confidence 7
No 34
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.83 E-value=1.1e-08 Score=99.84 Aligned_cols=79 Identities=24% Similarity=0.391 Sum_probs=68.9
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
...|.+...||+|.|+.|..+... .+..||+|.+++. .......+.+|+++|..+.|||||+|+.+......++|||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 345677899999999999999875 4889999999876 3344456999999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 135 ey 136 (596)
T KOG0586|consen 135 EY 136 (596)
T ss_pred Ee
Confidence 98
No 35
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.83 E-value=1.1e-08 Score=98.22 Aligned_cols=77 Identities=23% Similarity=0.304 Sum_probs=66.0
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...++||+|+||.||++... +++.||||.+... .......+.+|++++..++|+||+++++++...+..++||||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 3455689999999999999875 4789999998654 333456799999999999999999999999999999999997
No 36
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.83 E-value=1.8e-08 Score=96.07 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=68.1
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.++|...++||+|+||.||++... .+..+|+|.+... .......+.+|++++.+++|+||+++++++...+..+||||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 356778899999999999999876 4778999988654 33344679999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 84 ~ 84 (333)
T cd06650 84 H 84 (333)
T ss_pred c
Confidence 7
No 37
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.82 E-value=7.7e-09 Score=101.06 Aligned_cols=83 Identities=27% Similarity=0.414 Sum_probs=68.5
Q ss_pred HHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEE
Q 044262 317 IRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSF 388 (399)
Q Consensus 317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~ 388 (399)
++.+.+++...++||+|+||.||++.+.. +..||+|.++... ....+.+++|+.+|..+. |||||+++|++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 44555677788999999999999998632 3579999997542 233457899999999997 999999999999
Q ss_pred eCCeEEEEEeC
Q 044262 389 EGTERLLIYEF 399 (399)
Q Consensus 389 ~~~~~~lv~Ey 399 (399)
.....++|+||
T Consensus 112 ~~~~~~iv~E~ 122 (401)
T cd05107 112 KGGPIYIITEY 122 (401)
T ss_pred cCCCcEEEEec
Confidence 88899999997
No 38
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.82 E-value=2.6e-09 Score=88.92 Aligned_cols=76 Identities=28% Similarity=0.496 Sum_probs=63.6
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+...++||+|.||+|+|+...+ ++.||+|+.+-. ++......++||-+++++.|+|||+|+.+...+..+-||+||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3445899999999999998654 788999988643 333345789999999999999999999999888889999986
No 39
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.81 E-value=7.3e-09 Score=94.81 Aligned_cols=80 Identities=29% Similarity=0.544 Sum_probs=71.0
Q ss_pred hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+..+|...++||+|+||.||++...++..+++|.+..........+..|+.++..++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34557778999999999999999988889999999776655566899999999999999999999999999999999997
No 40
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.80 E-value=9e-09 Score=98.62 Aligned_cols=72 Identities=32% Similarity=0.543 Sum_probs=64.4
Q ss_pred cCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 327 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+++||.|.||.||-|... .|+.||||.+.+. ..+....+.+|+.+|.+++||.||.|.-++...+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence 689999999999999874 5999999999775 34455689999999999999999999999999999999998
No 41
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.80 E-value=6.4e-09 Score=99.28 Aligned_cols=81 Identities=25% Similarity=0.384 Sum_probs=64.9
Q ss_pred hhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG 390 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 390 (399)
.+.++|...++||+|+||.||++... .+..||||.++... ......+.+|+.++.++ +||||++++|++...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 34566788899999999999999741 24679999997542 23345799999999999 899999999988764
Q ss_pred -CeEEEEEeC
Q 044262 391 -TERLLIYEF 399 (399)
Q Consensus 391 -~~~~lv~Ey 399 (399)
...++||||
T Consensus 84 ~~~~~lv~ey 93 (338)
T cd05102 84 NGPLMVIVEF 93 (338)
T ss_pred CCceEEEEec
Confidence 458899997
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.80 E-value=5.1e-09 Score=95.18 Aligned_cols=79 Identities=19% Similarity=0.373 Sum_probs=63.6
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh--hHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--GELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLL 395 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l 395 (399)
.++|+..+.|++|.||.||+|.-+ .++.||+|+++-.... -...-++||.+|.+.+|||||.+.-+... -+..||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 345777899999999999999864 4789999999654221 12356899999999999999999887764 366999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 155 VMe~ 158 (419)
T KOG0663|consen 155 VMEY 158 (419)
T ss_pred eHHH
Confidence 9997
No 43
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.80 E-value=1.6e-08 Score=96.33 Aligned_cols=78 Identities=23% Similarity=0.377 Sum_probs=66.7
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|...+.||+|+||.||++.... ++.||+|.+.... ....+.+.+|+.++.+++||||+++++.+..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 456778999999999999999854 7899999986532 223456899999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 98 e~ 99 (329)
T PTZ00263 98 EF 99 (329)
T ss_pred cC
Confidence 97
No 44
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.79 E-value=1.7e-08 Score=97.37 Aligned_cols=77 Identities=23% Similarity=0.302 Sum_probs=66.2
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...++||+|+||.||++... .++.||||.+... .......+.+|+.+|..++|+||+++++.+..++..+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 5777899999999999999875 4789999999653 22334568899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (364)
T cd05599 82 Y 82 (364)
T ss_pred C
Confidence 7
No 45
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.79 E-value=1.2e-08 Score=98.07 Aligned_cols=80 Identities=24% Similarity=0.293 Sum_probs=70.3
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
..++|....+||+|+||.||.++-++ |..+|+|+|++.. ....+....|-.+|...++++||+|+-.+-+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45678899999999999999998765 8899999998763 3445678899999999999999999999999999999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 219 iMEy 222 (550)
T KOG0605|consen 219 IMEY 222 (550)
T ss_pred EEEe
Confidence 9998
No 46
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.79 E-value=3.4e-10 Score=100.40 Aligned_cols=78 Identities=27% Similarity=0.508 Sum_probs=63.8
Q ss_pred CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEE-EeCCe-EEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFS-FEGTE-RLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~-~~lv 396 (399)
.+|.+.++||+|.||.|||+.. .+|..||.|.++-. +.+..++...|+.+|++|+|||||++.++. .+..+ +.||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3566779999999999999974 67999999998743 445567899999999999999999999843 44455 7888
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 99 mE~ 101 (375)
T KOG0591|consen 99 MEL 101 (375)
T ss_pred HHh
Confidence 886
No 47
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.79 E-value=1.4e-08 Score=92.67 Aligned_cols=76 Identities=26% Similarity=0.483 Sum_probs=65.9
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.|...+.||+|+||.||++.++++..+|+|.+.... ....+|.+|+.++.+++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 356678899999999999999877889999886443 2345799999999999999999999999999999999997
No 48
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.79 E-value=1.9e-08 Score=97.65 Aligned_cols=77 Identities=27% Similarity=0.269 Sum_probs=65.7
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...++||+|+||.||++... +++.||+|.+... .......+.+|+.++.+++||||+++++++...+..+||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 5667899999999999999864 5789999998653 22234568899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (377)
T cd05629 82 F 82 (377)
T ss_pred C
Confidence 7
No 49
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=98.79 E-value=2.6e-09 Score=99.21 Aligned_cols=76 Identities=20% Similarity=0.455 Sum_probs=66.6
Q ss_pred CcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..+.||+|.||+|-++.- ..|+.||||.+++. ++++.-...+||++|..|+||||++++.++.+.+.+.|||||
T Consensus 55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY 134 (668)
T KOG0611|consen 55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY 134 (668)
T ss_pred HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence 45568999999999999874 56999999999875 445555688999999999999999999999999999999998
No 50
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.79 E-value=3.1e-08 Score=94.36 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=67.7
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|...+.||+|+||.||++... .+..+|+|.+... .......+.+|+++|.+++|+||+++++++...+..+|||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 56777899999999999999975 4788999998754 333456799999999999999999999999999999999997
No 51
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.78 E-value=2.5e-08 Score=93.60 Aligned_cols=78 Identities=26% Similarity=0.460 Sum_probs=66.8
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|...++||+|+||.||++... +++.+|+|.+..... .....+.+|+.+++.++||||+++.+++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 56777899999999999999975 578999999875432 2234678999999999999999999999999999999997
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.77 E-value=2.4e-08 Score=95.19 Aligned_cols=77 Identities=25% Similarity=0.383 Sum_probs=66.3
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...++||+|+||.||++.... ++.||+|.+.... ......+.+|+.++..++||||+++++.+..++..+||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 46778999999999999999864 7899999996531 2334578899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (333)
T cd05600 82 Y 82 (333)
T ss_pred C
Confidence 7
No 53
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.77 E-value=3e-08 Score=90.05 Aligned_cols=72 Identities=28% Similarity=0.545 Sum_probs=63.1
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++...++..+|+|.+.... ......|.+|+.++..++|+||+++++++...+..++||||
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEEC
Confidence 4789999999999998888899999987653 33345799999999999999999999999988899999997
No 54
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.77 E-value=1.6e-08 Score=92.59 Aligned_cols=79 Identities=24% Similarity=0.415 Sum_probs=68.5
Q ss_pred hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.++.|...+.||+|+||.||++...++..||+|.++... ...+++.+|+.++.+++|+||+++.+++...+..+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 345677789999999999999998777889999986543 2356799999999999999999999999988899999997
No 55
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.77 E-value=1.5e-08 Score=93.76 Aligned_cols=71 Identities=28% Similarity=0.474 Sum_probs=59.8
Q ss_pred cccccCceEEEEEEEcC-------------------------CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccce
Q 044262 329 KLGQGGFGAVYKGRLSH-------------------------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRL 383 (399)
Q Consensus 329 ~iG~G~fG~Vykg~~~~-------------------------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l 383 (399)
+||+|+||.||+|.+.. ...|++|.+.........+|.+|+.++..++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 13589999866544445678999999999999999999
Q ss_pred eEEEEeCCeEEEEEeC
Q 044262 384 LGFSFEGTERLLIYEF 399 (399)
Q Consensus 384 ~g~~~~~~~~~lv~Ey 399 (399)
+|++......+|||||
T Consensus 82 ~~~~~~~~~~~lv~ey 97 (274)
T cd05076 82 HGVCVRGSENIMVEEF 97 (274)
T ss_pred EEEEEeCCceEEEEec
Confidence 9999999999999997
No 56
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.77 E-value=2e-08 Score=92.95 Aligned_cols=79 Identities=27% Similarity=0.397 Sum_probs=70.1
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.++|...+.||+|+||.||++... ++..+++|.+........+.|.+|++++.+++|+||+++++.+..++..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 456777899999999999999975 4789999999776666667899999999999999999999999999999999997
No 57
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.77 E-value=2.6e-08 Score=92.81 Aligned_cols=78 Identities=26% Similarity=0.421 Sum_probs=65.7
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.|...++||+|+||.||++... ++..||+|.++... ......+.+|+.++.+++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 34677899999999999999875 47899999986542 22344688999999999999999999999888889999997
No 58
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.76 E-value=2.8e-08 Score=96.61 Aligned_cols=77 Identities=23% Similarity=0.257 Sum_probs=65.8
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.|...++||+|+||.||++... .++.+|+|.+.... ......+.+|+.++.+++|+|||++++.+...+..+||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 4667889999999999999874 47889999986532 2334578899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (382)
T cd05625 82 Y 82 (382)
T ss_pred C
Confidence 7
No 59
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.76 E-value=1.5e-09 Score=102.68 Aligned_cols=77 Identities=27% Similarity=0.478 Sum_probs=64.6
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHH--HHHHHHHHhcCC-CCCccceeEEEEeCC-eEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELE--FKNEVLLVARLQ-HRNLVRLLGFSFEGT-ERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~--f~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lv 396 (399)
++|...++||.|.||.||+|+-.. +..||||++++.... +++ -+||+..|++|. |||||+|..++.+.+ .+++|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 345667899999999999999754 788999999765322 333 578999999999 999999999999888 89999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 89 fE~ 91 (538)
T KOG0661|consen 89 FEF 91 (538)
T ss_pred HHh
Confidence 997
No 60
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.76 E-value=2.9e-08 Score=93.48 Aligned_cols=78 Identities=26% Similarity=0.431 Sum_probs=65.9
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.|...++||+|+||.||++..+ .+..||+|.++... ......+.+|+.++.+++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 34677789999999999999875 47789999987542 22334688999999999999999999999999999999997
No 61
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.76 E-value=4.2e-08 Score=90.12 Aligned_cols=78 Identities=23% Similarity=0.402 Sum_probs=67.4
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|...+.||+|+||.||+|... +++.+|+|.+..........+.+|+.++.+++|+||+++++.+...+..++|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 45777899999999999999974 5788999998765444455688999999999999999999999999999999997
No 62
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.76 E-value=3.1e-08 Score=91.02 Aligned_cols=78 Identities=28% Similarity=0.546 Sum_probs=66.3
Q ss_pred CCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
++|...+.||+|+||.||+|.++. ...|++|.++.. ......+|.+|+.++.+++|+||+++.+.+...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 457778999999999999999743 357999998754 334456799999999999999999999999888899999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 84 ~e~ 86 (266)
T cd05033 84 TEY 86 (266)
T ss_pred EEc
Confidence 997
No 63
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.75 E-value=2.1e-08 Score=93.19 Aligned_cols=77 Identities=21% Similarity=0.357 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...+.||+|+||.||++..+. ++.+|+|++.... ....+.+.+|+.++..++|+||+++.+++...+..+|||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 46778899999999999999864 7889999987542 23345688999999999999999999999999999999997
No 64
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.75 E-value=4.8e-08 Score=91.99 Aligned_cols=77 Identities=19% Similarity=0.187 Sum_probs=66.2
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...++||+|+||.||++... .+..+++|.+... ......++.+|++++.+++||||+++++.+..++..+||+||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 5777899999999999999875 4778899988654 333445789999999999999999999999999999999997
No 65
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.74 E-value=1.4e-08 Score=98.56 Aligned_cols=82 Identities=29% Similarity=0.447 Sum_probs=67.6
Q ss_pred HhhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262 318 RDATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE 389 (399)
Q Consensus 318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 389 (399)
....++|...++||+|+||.||++... .+..||+|.++.. .......+.+|+.++..+ +|+|||+++|++..
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 344567888899999999999998742 2357999999754 333345789999999999 89999999999999
Q ss_pred CCeEEEEEeC
Q 044262 390 GTERLLIYEF 399 (399)
Q Consensus 390 ~~~~~lv~Ey 399 (399)
.+..+|||||
T Consensus 114 ~~~~~lv~ey 123 (374)
T cd05106 114 GGPVLVITEY 123 (374)
T ss_pred CCCeEEeHhh
Confidence 9999999997
No 66
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.74 E-value=2.9e-08 Score=94.93 Aligned_cols=78 Identities=24% Similarity=0.318 Sum_probs=65.6
Q ss_pred CCCcccCcccccCceEEEEEEEcC--CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH--GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~--g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
++|...++||+|+||.||++.... +..||+|.+... .....+.+.+|+.++..++||||+++++++...+..+||
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 457778999999999999998644 358999998643 223345788999999999999999999999999999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 110 ~Ey 112 (340)
T PTZ00426 110 LEF 112 (340)
T ss_pred EeC
Confidence 997
No 67
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.74 E-value=1.7e-08 Score=94.21 Aligned_cols=77 Identities=19% Similarity=0.280 Sum_probs=65.7
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...++||+|+||.||++... .++.+|+|.+.... ....+.+.+|+.++.+++||||+++++.+...+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 4667789999999999999975 47899999986432 2334568899999999999999999999988899999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (291)
T cd05612 82 Y 82 (291)
T ss_pred C
Confidence 7
No 68
>PHA02988 hypothetical protein; Provisional
Probab=98.74 E-value=3.6e-08 Score=91.72 Aligned_cols=72 Identities=19% Similarity=0.346 Sum_probs=60.7
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCCChhh---HHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEEEEEeC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQG---ELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERLLIYEF 399 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey 399 (399)
...||+|++|.||+|.+ +|+.||||.++...... .+.|.+|+.+|.+++|||||+++|++.. ....+|||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 68899999997643222 4578899999999999999999999876 3467899997
No 69
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.73 E-value=3.6e-08 Score=95.60 Aligned_cols=77 Identities=21% Similarity=0.236 Sum_probs=65.6
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.|...++||+|+||.||++... .++.+|+|.+.+.. ......+.+|+.+|.+++|+||+++++.+..++..+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 4677899999999999999875 47899999986532 2234568899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (376)
T cd05598 82 Y 82 (376)
T ss_pred C
Confidence 7
No 70
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.73 E-value=3.5e-08 Score=91.59 Aligned_cols=77 Identities=35% Similarity=0.550 Sum_probs=65.0
Q ss_pred CCcccCcccccCceEEEEEEE-----cCCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~-----~~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
.|+..++||+|+||.||+|.. ..+..+++|.+... .......|.+|+.+++.++|+||+++++++..++..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 466678999999999999985 23568999999754 334446799999999999999999999999988999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 86 ~e~ 88 (283)
T cd05090 86 FEY 88 (283)
T ss_pred EEc
Confidence 997
No 71
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.73 E-value=2.5e-08 Score=91.29 Aligned_cols=78 Identities=31% Similarity=0.467 Sum_probs=67.8
Q ss_pred cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.++|...++||+|+||.||++...++..|++|.+.... ...+.+.+|+.++..++|+||+++++.+...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 34577789999999999999998888889999986543 2356799999999999999999999999888889999996
No 72
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.73 E-value=6.6e-08 Score=89.60 Aligned_cols=77 Identities=21% Similarity=0.304 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..++||+|+||.||++... .+..+|+|.+... .....+++.+|+.++.+++||||+++++.+...+..+||+||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 4566789999999999999863 5788999998654 334456799999999999999999999999999999999997
No 73
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.72 E-value=3.9e-08 Score=89.97 Aligned_cols=79 Identities=27% Similarity=0.478 Sum_probs=68.7
Q ss_pred hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..++|...++||+|+||.||++..+++..+++|.+.... ...+++.+|+.++.+++|+||+++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 456778889999999999999998777889999987543 2346799999999999999999999999888889999996
No 74
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.71 E-value=2.8e-08 Score=90.83 Aligned_cols=76 Identities=28% Similarity=0.477 Sum_probs=65.3
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...+.||+|+||.||++...++..+|+|.+.... ....+|.+|+.++.+++||||+++++++...+..+++|||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 355678899999999999998777789999987543 2345799999999999999999999999888889999997
No 75
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.71 E-value=5.6e-08 Score=90.68 Aligned_cols=79 Identities=27% Similarity=0.434 Sum_probs=70.0
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.+.|...++||+|+||.||++.... +..+++|.+........+.+.+|+.++..++|+||+++++.+......++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 3557778899999999999999854 789999999877666677899999999999999999999999988999999997
No 76
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.71 E-value=4e-08 Score=91.45 Aligned_cols=76 Identities=28% Similarity=0.389 Sum_probs=64.1
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..++||+|+||.||++... +++.||+|.+..... .....+.+|+.++..++|+||+++.+.+..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 556789999999999999874 578999999865321 2234578999999999999999999999888999999997
No 77
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.71 E-value=3.7e-08 Score=93.47 Aligned_cols=80 Identities=24% Similarity=0.428 Sum_probs=64.9
Q ss_pred hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh--------------hHHHHHHHHHHHhcCCCCCcccee
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ--------------GELEFKNEVLLVARLQHRNLVRLL 384 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~--------------~~~~f~~E~~~l~~l~H~niv~l~ 384 (399)
..+.|.+...||+|.||.|-++.-. +++.||||.|.+.... ..+...+||.+|++++|+|||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4466788899999999999999853 5889999999653211 124688999999999999999999
Q ss_pred EEEEeC--CeEEEEEeC
Q 044262 385 GFSFEG--TERLLIYEF 399 (399)
Q Consensus 385 g~~~~~--~~~~lv~Ey 399 (399)
.+.-++ +.+|||+||
T Consensus 175 EvLDDP~s~~~YlVley 191 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEY 191 (576)
T ss_pred EeecCcccCceEEEEEe
Confidence 987553 569999998
No 78
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.71 E-value=5.1e-08 Score=94.12 Aligned_cols=78 Identities=22% Similarity=0.266 Sum_probs=66.0
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|+..++||+|+||.||++... .++.+|+|.+.... ......+.+|+.++.+++|+||+++++.+...+..+|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 35677899999999999999875 47899999996532 223356888999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 81 E~ 82 (363)
T cd05628 81 EF 82 (363)
T ss_pred cC
Confidence 97
No 79
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.70 E-value=5.3e-08 Score=88.63 Aligned_cols=72 Identities=28% Similarity=0.558 Sum_probs=62.3
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... +++.+|+|.+... .......|.+|++++..++|+||+++++++......+||+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEee
Confidence 46899999999999875 5888999987654 334456799999999999999999999999988899999997
No 80
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.70 E-value=7.2e-09 Score=100.14 Aligned_cols=73 Identities=29% Similarity=0.487 Sum_probs=61.5
Q ss_pred hhcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
++.+.+...+.||.|+-|.||.|.+ .++.||||+++... ..+|+.|++|+|+||+.|.|+|....-.+||||
T Consensus 121 iPFe~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME 192 (904)
T KOG4721|consen 121 IPFEEISELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME 192 (904)
T ss_pred CCHHHhhhhhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence 3334455678999999999999999 56889999875432 357889999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 193 f 193 (904)
T KOG4721|consen 193 F 193 (904)
T ss_pred c
Confidence 8
No 81
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=98.70 E-value=5.2e-08 Score=89.89 Aligned_cols=76 Identities=24% Similarity=0.283 Sum_probs=66.5
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-eEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-ERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~Ey 399 (399)
+...++||+|..|.|||+.++. ++.+|+|.+... +....++..+|++++.+.+||+||+++|++.... +..|+|||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4456899999999999999864 788999999544 5566778999999999999999999999999888 59999998
No 82
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.70 E-value=7.9e-08 Score=88.22 Aligned_cols=78 Identities=24% Similarity=0.465 Sum_probs=66.7
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|...++||+|+||.||++... +++.||||.+... .......+.+|+++++.++||||+++++.+...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 45777899999999999999875 5789999987642 3344457899999999999999999999999889999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 e~ 83 (267)
T cd08228 82 EL 83 (267)
T ss_pred Ee
Confidence 97
No 83
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.70 E-value=4.8e-08 Score=90.88 Aligned_cols=76 Identities=28% Similarity=0.360 Sum_probs=64.2
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.+++|+||+++.+.+...+..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 556789999999999999874 58899999986532 22234688999999999999999999999999999999997
No 84
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.70 E-value=4e-08 Score=91.39 Aligned_cols=79 Identities=34% Similarity=0.579 Sum_probs=66.9
Q ss_pred cCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER 393 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 393 (399)
.++|...+.||+|+||.||++..+ .+..+|+|.+... ......+|.+|+.++.+++||||+++++++..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 456778899999999999999863 3568999998754 334456799999999999999999999999988889
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 84 ~lv~e~ 89 (288)
T cd05050 84 CLLFEY 89 (288)
T ss_pred EEEEec
Confidence 999997
No 85
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.69 E-value=6.8e-08 Score=91.65 Aligned_cols=72 Identities=24% Similarity=0.221 Sum_probs=61.6
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... +++.+|+|.++.. .......+.+|+.++.+++||||+++.+.+...+..+|||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 76 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeC
Confidence 46899999999999875 5889999998753 223345688999999999999999999999999999999997
No 86
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=98.69 E-value=4.2e-08 Score=91.37 Aligned_cols=81 Identities=30% Similarity=0.550 Sum_probs=66.7
Q ss_pred hhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT 391 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 391 (399)
...++|...++||+|+||.||+|...+ +..||+|.+.... ......+.+|+.++..++|+||+++++.+...+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 345667888999999999999997532 4479999886542 233456889999999999999999999998888
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
..++||||
T Consensus 83 ~~~lv~e~ 90 (288)
T cd05061 83 PTLVVMEL 90 (288)
T ss_pred CcEEEEeC
Confidence 99999997
No 87
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.69 E-value=5e-08 Score=94.50 Aligned_cols=76 Identities=20% Similarity=0.352 Sum_probs=64.3
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----ERLL 395 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l 395 (399)
|+..++||+|+||.||++... +++.||+|.+... .....+.+.+|++++..++|+||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 667899999999999999864 5889999998653 2234467899999999999999999999987766 7899
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+||
T Consensus 82 v~e~ 85 (372)
T cd07853 82 VTEL 85 (372)
T ss_pred Eeec
Confidence 9997
No 88
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.69 E-value=4.6e-08 Score=94.18 Aligned_cols=79 Identities=28% Similarity=0.495 Sum_probs=68.6
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChh---hHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l 395 (399)
...|...+.||+|.||.||++..+. |+.+|+|.+.+.... ....+.+|+.+|.++. |||||.+.+.+...+..+|
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3456677999999999999999866 899999999775332 3458999999999998 9999999999999999999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|||+
T Consensus 114 vmEL 117 (382)
T KOG0032|consen 114 VMEL 117 (382)
T ss_pred EEEe
Confidence 9996
No 89
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.69 E-value=8e-08 Score=87.53 Aligned_cols=76 Identities=32% Similarity=0.527 Sum_probs=65.4
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-----VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
|...+.||+|+||.||+|... ++..|++|.+.... .+..+.+.+|+.++..++|+||+++.+++..++..++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 455689999999999999986 68899999986532 234567999999999999999999999999889999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 e~ 83 (258)
T cd06632 82 EL 83 (258)
T ss_pred Ee
Confidence 97
No 90
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.69 E-value=4.1e-08 Score=90.81 Aligned_cols=80 Identities=33% Similarity=0.592 Sum_probs=66.8
Q ss_pred hcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE 392 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 392 (399)
..++|+..++||+|+||.||++... .+..||+|.+... ......+|.+|+.++..++|+||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4566888899999999999998753 2457999998653 23345679999999999999999999999988889
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++||||
T Consensus 84 ~~lv~e~ 90 (277)
T cd05062 84 TLVIMEL 90 (277)
T ss_pred eEEEEec
Confidence 9999997
No 91
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=98.69 E-value=2.6e-08 Score=91.77 Aligned_cols=79 Identities=23% Similarity=0.385 Sum_probs=68.4
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
.++|...++||+|+||+|+....++ ++..|+|.+++. .....+....|..+|.+++||.||+|+-.+..++.++||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4578889999999999999988755 788999999775 233456788999999999999999999998889999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 104 ld~ 106 (357)
T KOG0598|consen 104 LDY 106 (357)
T ss_pred Eec
Confidence 997
No 92
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.68 E-value=7.2e-08 Score=91.49 Aligned_cols=72 Identities=24% Similarity=0.224 Sum_probs=61.6
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++... +|..||+|.++.. .......+.+|+.++..++||||+++.+.+...+..+|||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~ 76 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 76 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeC
Confidence 46899999999999864 5889999999753 223345678999999999999999999999999999999997
No 93
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.68 E-value=4.1e-08 Score=95.05 Aligned_cols=80 Identities=24% Similarity=0.237 Sum_probs=67.1
Q ss_pred hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
..++|...++||+|+||.||++... .+..+|+|.+... .......+.+|+.++..++||||+++++++..++..+|
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3456778899999999999999875 4789999998642 22233457899999999999999999999999999999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 121 v~Ey 124 (370)
T cd05596 121 VMEY 124 (370)
T ss_pred EEcC
Confidence 9997
No 94
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.68 E-value=7.7e-08 Score=89.25 Aligned_cols=78 Identities=28% Similarity=0.537 Sum_probs=65.4
Q ss_pred CCCcccCcccccCceEEEEEEEc-----CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERL 394 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 394 (399)
.++...+.||+|+||.||++.++ .+..|++|.+........+.|.+|++++..++|+||+++.+++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 35667789999999999999853 4678999999776666667899999999999999999999987543 4588
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
||+||
T Consensus 84 lv~e~ 88 (284)
T cd05081 84 LVMEY 88 (284)
T ss_pred EEEEe
Confidence 99997
No 95
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.68 E-value=6e-08 Score=89.18 Aligned_cols=78 Identities=23% Similarity=0.477 Sum_probs=65.0
Q ss_pred CCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
.+|...+.||+|+||.||+|.... +..+|+|.++.. .....+.|.+|+.++..++||||+++.+++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 356677999999999999998642 336999998654 233456799999999999999999999999988999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 84 ~e~ 86 (267)
T cd05066 84 TEY 86 (267)
T ss_pred EEc
Confidence 997
No 96
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.68 E-value=5.1e-08 Score=94.41 Aligned_cols=83 Identities=20% Similarity=0.225 Sum_probs=68.8
Q ss_pred HHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262 317 IRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE 392 (399)
Q Consensus 317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 392 (399)
+....++|...++||+|+||.||++.... ++.+|+|.+.+. .......+.+|+.++..++||||+++++++..++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 33445678888999999999999999854 788999998642 22234468899999999999999999999999999
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++||||
T Consensus 118 ~~lv~Ey 124 (370)
T cd05621 118 LYMVMEY 124 (370)
T ss_pred EEEEEcC
Confidence 9999997
No 97
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.68 E-value=4.6e-08 Score=90.47 Aligned_cols=78 Identities=29% Similarity=0.631 Sum_probs=66.4
Q ss_pred CCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 394 (399)
.+|...+.||+|+||.||++...+ +..||+|.+...... ..+.|.+|++++.+++|+||+++.+++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 346667899999999999998643 368999999765433 4568999999999999999999999999999999
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+||||
T Consensus 85 lv~e~ 89 (280)
T cd05049 85 MVFEY 89 (280)
T ss_pred EEEec
Confidence 99997
No 98
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.68 E-value=7.8e-08 Score=91.59 Aligned_cols=77 Identities=22% Similarity=0.292 Sum_probs=65.5
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++.... ++.+|+|.+.+. .....+.+.+|+.++..++|+||+++.+++..++..+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 56678999999999999999754 789999998642 22234568899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (331)
T cd05597 82 Y 82 (331)
T ss_pred c
Confidence 7
No 99
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.67 E-value=6.8e-08 Score=89.57 Aligned_cols=76 Identities=28% Similarity=0.445 Sum_probs=66.5
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..++||+|+||.||++.... +..+++|.+........+.+.+|++++..++|+||+++.+.+..++..++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 3456889999999999999864 678899998766666667899999999999999999999999999999999997
No 100
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.67 E-value=8.2e-08 Score=90.00 Aligned_cols=78 Identities=27% Similarity=0.445 Sum_probs=65.8
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.|...++||+|+||.||++... .+..||+|.+.... ......+.+|+.++.+++|+||+++++++...+..++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 34667789999999999999875 47889999986542 22344678999999999999999999999999999999997
No 101
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.67 E-value=7.5e-08 Score=88.63 Aligned_cols=72 Identities=36% Similarity=0.542 Sum_probs=60.5
Q ss_pred CcccccCceEEEEEEEcC---CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||+|...+ +..+++|.++... ......+.+|+.++..++||||++++|++......++||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 76 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEF 76 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEEC
Confidence 368999999999998754 3568999886543 33345789999999999999999999999888889999997
No 102
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.67 E-value=6.3e-08 Score=89.93 Aligned_cols=77 Identities=19% Similarity=0.241 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..++||+|+||.||++... ++..+|+|.+... .....+.+.+|++++..++|+||+++++.+...+..+|||||
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4566789999999999999875 4788999988654 233456799999999999999999999999999999999997
No 103
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.67 E-value=1.1e-07 Score=88.04 Aligned_cols=76 Identities=21% Similarity=0.422 Sum_probs=65.0
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|+||.||++... ++..+|+|.+.... ......+.+|+.++.+++|+||+++++++..++..++||||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 556788999999999999864 57899999886542 33445789999999999999999999999999999999997
No 104
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.67 E-value=9.6e-08 Score=90.87 Aligned_cols=72 Identities=24% Similarity=0.224 Sum_probs=61.9
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++... ++..+|+|.+... .......+.+|+.++..++||||+++.+.+...+..+|||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey 76 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEY 76 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeC
Confidence 46899999999999864 4889999999753 223345788999999999999999999999999999999997
No 105
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.66 E-value=1.1e-07 Score=86.78 Aligned_cols=79 Identities=20% Similarity=0.412 Sum_probs=69.2
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.++|...++||+|+||.||++... .+..+++|.+........+.+.+|+.++..++||||+++++.+...+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 356777899999999999999875 4678999999776555567899999999999999999999999999999999997
No 106
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.66 E-value=7.4e-08 Score=87.89 Aligned_cols=76 Identities=33% Similarity=0.599 Sum_probs=66.6
Q ss_pred CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|...+.||+|.||.||++.. .++.|++|.+..... ..+.+.+|+.++.+++|+||+++++++...+..++||||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 4567789999999999999987 478899999976543 456899999999999999999999999888889999996
No 107
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.66 E-value=1.3e-07 Score=86.77 Aligned_cols=76 Identities=32% Similarity=0.552 Sum_probs=64.8
Q ss_pred CcccCcccccCceEEEEEEEcCCcEEEEEEecCCC------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS------VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
|...+.||+|.||.||++...+++.+|+|.++... ......+.+|++++..++|+||+++.+++...+..++++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 45678999999999999988778899999886432 122346889999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 e~ 83 (265)
T cd06631 82 EF 83 (265)
T ss_pred ec
Confidence 97
No 108
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.66 E-value=6.9e-08 Score=88.68 Aligned_cols=78 Identities=23% Similarity=0.436 Sum_probs=67.2
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|...++||+|+||.||++... +++.+++|.++.........+.+|+.++..++||||+++++.+...+..++|+||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 35666789999999999999874 4788999998765544455688999999999999999999999999999999997
No 109
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.65 E-value=6.5e-08 Score=88.98 Aligned_cols=77 Identities=27% Similarity=0.518 Sum_probs=65.4
Q ss_pred CCcccCcccccCceEEEEEEEcC-C---cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-G---QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
.+...+.||+|+||.||+|.... + ..|++|.+... ......+|..|+.+++.++||||+++.+++..+...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 35567899999999999999753 2 36999998754 4445668999999999999999999999998888999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 85 e~ 86 (269)
T cd05065 85 EF 86 (269)
T ss_pred ec
Confidence 97
No 110
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.65 E-value=1.2e-07 Score=86.93 Aligned_cols=78 Identities=27% Similarity=0.489 Sum_probs=67.5
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|...++||+|+||.||++... +++.+++|.++.. .....+.+.+|++++.+++|+|++++++.+...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 46777899999999999999986 6889999988642 2333567999999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 e~ 83 (267)
T cd08224 82 EL 83 (267)
T ss_pred ec
Confidence 97
No 111
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.65 E-value=6.2e-08 Score=88.67 Aligned_cols=78 Identities=31% Similarity=0.475 Sum_probs=65.7
Q ss_pred hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+.|...++||+|+||.||++..++++.+|+|.+..... ....|.+|+.++..++|+||+++.++. ..+..++++||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence 3456777899999999999999988889999999875432 345799999999999999999999886 45668999986
No 112
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.65 E-value=9.6e-08 Score=90.16 Aligned_cols=70 Identities=23% Similarity=0.229 Sum_probs=60.3
Q ss_pred ccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|+||.||++...+ ++.||+|.+... .......+.+|+.++.+++||||+++++.+...+..+|||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcC
Confidence 6999999999998754 788999998653 233345788999999999999999999999999999999997
No 113
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.65 E-value=7.5e-08 Score=88.43 Aligned_cols=72 Identities=24% Similarity=0.439 Sum_probs=60.3
Q ss_pred CcccccCceEEEEEEEcC-------------CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262 328 NKLGQGGFGAVYKGRLSH-------------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-------------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 394 (399)
+.||+|+||.||+|.+.. ...|++|.+..........|..|+.++..++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998632 2258999887655455567899999999999999999999999888899
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+||||
T Consensus 81 lv~e~ 85 (262)
T cd05077 81 MVEEF 85 (262)
T ss_pred EEEec
Confidence 99997
No 114
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.64 E-value=7.7e-08 Score=93.16 Aligned_cols=85 Identities=21% Similarity=0.221 Sum_probs=70.5
Q ss_pred hhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG 390 (399)
Q Consensus 315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 390 (399)
.++....++|...+.||+|+||.||++.... ++.+|+|.+... .......+.+|+.++..++||||+++++.+..+
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 4445556788889999999999999999864 788999998642 222334578899999999999999999999999
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
+..++||||
T Consensus 116 ~~~~lv~Ey 124 (371)
T cd05622 116 RYLYMVMEY 124 (371)
T ss_pred CEEEEEEcC
Confidence 999999997
No 115
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.64 E-value=1.3e-07 Score=88.65 Aligned_cols=78 Identities=27% Similarity=0.437 Sum_probs=68.3
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..|...+.||+|+||.||++... ++..||+|.+........+.+.+|+.+++.++|+||+++++.+..++..++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 55777899999999999999864 5889999999765545556789999999999999999999999999999999997
No 116
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.64 E-value=7.2e-08 Score=89.20 Aligned_cols=80 Identities=36% Similarity=0.658 Sum_probs=67.1
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE 392 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 392 (399)
.+++|...+.||+|+||.||++...+ +..|++|.+... .......|.+|+.++..++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 34567888999999999999998853 457899988654 33344579999999999999999999999988888
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++||||
T Consensus 84 ~~lv~e~ 90 (277)
T cd05036 84 RFILLEL 90 (277)
T ss_pred cEEEEec
Confidence 9999997
No 117
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.64 E-value=6.2e-08 Score=90.57 Aligned_cols=78 Identities=28% Similarity=0.466 Sum_probs=64.6
Q ss_pred CCCcccCcccccCceEEEEEEEcC---------------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH---------------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLG 385 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~---------------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g 385 (399)
..|...++||+|+||.||++...+ ...||+|.+... .......|.+|++++.+++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 456778999999999999886532 235899998654 3344567999999999999999999999
Q ss_pred EEEeCCeEEEEEeC
Q 044262 386 FSFEGTERLLIYEF 399 (399)
Q Consensus 386 ~~~~~~~~~lv~Ey 399 (399)
++...+..++||||
T Consensus 85 ~~~~~~~~~lv~e~ 98 (295)
T cd05097 85 VCVSDDPLCMITEY 98 (295)
T ss_pred EEcCCCccEEEEec
Confidence 99988999999997
No 118
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.64 E-value=1.1e-07 Score=89.57 Aligned_cols=79 Identities=27% Similarity=0.442 Sum_probs=66.9
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
...|...++||+|.||.||++... +++.|++|.+... .....+++.+|++++..++||||+++.+++...+..+||
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 345777899999999999999875 4789999998643 223345789999999999999999999999999999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 94 ~e~ 96 (307)
T cd06607 94 MEY 96 (307)
T ss_pred HHh
Confidence 986
No 119
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.64 E-value=1e-07 Score=88.26 Aligned_cols=77 Identities=31% Similarity=0.547 Sum_probs=65.7
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..++||+|++|.||++... ++..|++|.++.... .....+.+|+.++.+++|+||+++++.+...+..+|||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 3567789999999999999985 478999999875432 2345678899999999999999999999999999999997
No 120
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.64 E-value=1.1e-07 Score=87.42 Aligned_cols=72 Identities=32% Similarity=0.508 Sum_probs=59.7
Q ss_pred CcccccCceEEEEEEEcC---CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH---GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||+|...+ ...+++|.+... .......|++|+.+++.++|+||+++++.+...+..+|||||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~ 76 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEF 76 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEe
Confidence 368999999999998644 346888887644 233345789999999999999999999999989999999997
No 121
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.63 E-value=1.3e-07 Score=89.59 Aligned_cols=72 Identities=33% Similarity=0.406 Sum_probs=60.4
Q ss_pred CcccccCceEEEEEEE----cCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++.. ..|+.+|+|.+.... ......+..|++++.+++||||+++++.+..++..+|||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999998864 247899999997532 22334678899999999999999999999999999999997
No 122
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.63 E-value=9.6e-08 Score=88.93 Aligned_cols=78 Identities=29% Similarity=0.565 Sum_probs=67.0
Q ss_pred CCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
.+|...+.||+|+||.||++... ++..+++|.+........+.+.+|++++.+++|+||+++.+++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 45677899999999999999752 235689999877665566789999999999999999999999998899999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+||
T Consensus 85 v~e~ 88 (288)
T cd05093 85 VFEY 88 (288)
T ss_pred EEEc
Confidence 9997
No 123
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.63 E-value=4.8e-08 Score=89.76 Aligned_cols=77 Identities=31% Similarity=0.523 Sum_probs=63.9
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCC-ccceeEEEEeCC------e
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRN-LVRLLGFSFEGT------E 392 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~------~ 392 (399)
.|...++||+|.||.||+|..+ .|..||+|++.-... .-.....+|+.++.+++|+| ||+|.+++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 3455678999999999999864 488999999976533 23345799999999999999 999999998876 7
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
++||+||
T Consensus 92 l~lvfe~ 98 (323)
T KOG0594|consen 92 LYLVFEF 98 (323)
T ss_pred EEEEEEe
Confidence 8899997
No 124
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.63 E-value=7.3e-08 Score=89.52 Aligned_cols=77 Identities=19% Similarity=0.297 Sum_probs=66.6
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..+.||+|+||.||++... .+..+|+|.+... .......+.+|+.++.+++|+||+++++.+...+..++|+||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 4667789999999999999986 5889999988654 334456799999999999999999999999999999999997
No 125
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.63 E-value=1.1e-07 Score=90.47 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++... .++.+|+|.+.+. .......+..|+.++..++|+||+++.+++...+..+||||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5677899999999999999875 4778999998653 22233458889999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 y 82 (331)
T cd05624 82 Y 82 (331)
T ss_pred C
Confidence 7
No 126
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.63 E-value=1.3e-07 Score=89.62 Aligned_cols=72 Identities=29% Similarity=0.432 Sum_probs=60.5
Q ss_pred CcccccCceEEEEEEEc----CCcEEEEEEecCC----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... .++.||+|.++.. .......+..|+.+|..++||||+++++.+..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 67999999999998752 4678999998653 122334678999999999999999999999999999999997
No 127
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.63 E-value=1.1e-07 Score=88.67 Aligned_cols=78 Identities=28% Similarity=0.494 Sum_probs=65.8
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|...++||+|+||.||++..+ +++.||+|.+..... .....+.+|+.++..++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 45677789999999999999875 478999999865422 2234578899999999999999999999989999999997
No 128
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.63 E-value=1.1e-08 Score=99.22 Aligned_cols=76 Identities=29% Similarity=0.477 Sum_probs=65.4
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|.....||.|+||.||-+.-. +.+.||||++.-. +...+.+.+.|+..|.+++|||++...|++.....-||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 555678999999999998753 4678999998654 334567899999999999999999999999999999999998
No 129
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.63 E-value=9.5e-08 Score=88.44 Aligned_cols=79 Identities=24% Similarity=0.439 Sum_probs=65.6
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTER 393 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~ 393 (399)
.++|...++||+|+||.||+|...+ +..|++|.+... .......+.+|+.++.+++|+||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4567778999999999999999865 678999998754 34445679999999999999999999998876 4667
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 85 ~~~~~~ 90 (280)
T cd05043 85 FVLYPY 90 (280)
T ss_pred EEEEEc
Confidence 888876
No 130
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.63 E-value=1.4e-07 Score=99.03 Aligned_cols=78 Identities=19% Similarity=0.367 Sum_probs=66.9
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|...++||+|+||.||++... .++.||+|++... .....+.|.+|++++.+++||||+++++++..++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 35677899999999999999875 4789999998653 2233457999999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 EY 83 (932)
T PRK13184 82 PY 83 (932)
T ss_pred Ec
Confidence 97
No 131
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.63 E-value=1.1e-07 Score=88.47 Aligned_cols=79 Identities=27% Similarity=0.426 Sum_probs=66.7
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+.+|...+.||+|+||.||++... ++..+++|.+..... .....+.+|+.++..++|+||+++.+++..++..++|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 456778899999999999999874 478999999865422 223467899999999999999999999998889999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 84 ~ 84 (291)
T cd07870 84 Y 84 (291)
T ss_pred c
Confidence 7
No 132
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.62 E-value=1.3e-07 Score=85.99 Aligned_cols=76 Identities=22% Similarity=0.368 Sum_probs=65.8
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++... ++..+++|.+... .......+.+|++++++++|+||+++++.+...+..++|+||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 556789999999999999975 4789999998643 344566899999999999999999999999999999999997
No 133
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.61 E-value=6.5e-08 Score=92.64 Aligned_cols=80 Identities=25% Similarity=0.429 Sum_probs=64.0
Q ss_pred hcCCCcccCcccccCceEEEEEEE------cCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC-
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRL------SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG- 390 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~------~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~- 390 (399)
+.++|...++||+|+||.||++.. ..++.||||.++... ......+.+|+.++.++ +|+||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 345678889999999999999973 236789999997542 23345788999999999 789999999988654
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
...+++|||
T Consensus 85 ~~~~lv~ey 93 (343)
T cd05103 85 GPLMVIVEF 93 (343)
T ss_pred CceEEEEec
Confidence 567899997
No 134
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.61 E-value=1.1e-07 Score=90.54 Aligned_cols=76 Identities=18% Similarity=0.456 Sum_probs=61.8
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----ERLL 395 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l 395 (399)
|...++||+|+||.||++... ++..||+|.+... .......+.+|+.++.+++||||+++.+++...+ ..+|
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 556789999999999999865 4789999998643 2233456899999999999999999999876432 4799
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 82 v~e~ 85 (338)
T cd07859 82 VFEL 85 (338)
T ss_pred EEec
Confidence 9997
No 135
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.61 E-value=1.6e-07 Score=87.12 Aligned_cols=76 Identities=34% Similarity=0.547 Sum_probs=64.8
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++... ++..|++|.+.... ....+.+.+|+.++..++|+||+++++++..++..++|+||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 556789999999999999975 48899999986432 22345788999999999999999999999999999999997
No 136
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.61 E-value=1.5e-07 Score=87.77 Aligned_cols=76 Identities=28% Similarity=0.409 Sum_probs=63.3
Q ss_pred CcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
|...+.||+|+||.||+|... ....+++|.+.... ......+.+|+.++..++||||+++++.+...+..+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 566789999999999999853 12468999886543 33456799999999999999999999999988889999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 82 ~e~ 84 (290)
T cd05045 82 VEY 84 (290)
T ss_pred EEe
Confidence 997
No 137
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.61 E-value=8e-08 Score=89.09 Aligned_cols=77 Identities=31% Similarity=0.557 Sum_probs=65.3
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...+.||+|+||.||++... ++..|+||.+.... ......+.+|++++.+++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 3667789999999999999875 47899999886432 22335789999999999999999999999988999999997
No 138
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.61 E-value=1.4e-07 Score=91.03 Aligned_cols=77 Identities=22% Similarity=0.281 Sum_probs=65.5
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++... .++.+|+|.+... .......+..|+.++..++|+||+++++.+...+..+||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 4667789999999999999875 4789999999643 22234568889999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (360)
T cd05627 82 F 82 (360)
T ss_pred C
Confidence 7
No 139
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.61 E-value=7.4e-08 Score=92.32 Aligned_cols=77 Identities=25% Similarity=0.311 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++... +++.||+|.+.... ......+..|+.++..++|+||+++++.+..++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 4667889999999999999975 48899999996531 1334578899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (350)
T cd05573 82 Y 82 (350)
T ss_pred C
Confidence 7
No 140
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.61 E-value=6.2e-08 Score=89.89 Aligned_cols=77 Identities=25% Similarity=0.430 Sum_probs=65.8
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..++||+|+||.||++..++ ++.+|+|.+.... ....+.+.+|++++..++|+||+++++++..++..++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 46677999999999999999864 7899999886532 22345788999999999999999999999989999999997
No 141
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.61 E-value=1.6e-07 Score=87.05 Aligned_cols=78 Identities=31% Similarity=0.556 Sum_probs=67.1
Q ss_pred CCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
.++...++||+|+||.||++... .+..+++|.+..........|.+|++++..++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45667799999999999999742 245799999877666667789999999999999999999999998888999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
++||
T Consensus 85 v~e~ 88 (280)
T cd05092 85 VFEY 88 (280)
T ss_pred EEec
Confidence 9997
No 142
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.61 E-value=1.6e-08 Score=100.22 Aligned_cols=76 Identities=32% Similarity=0.624 Sum_probs=62.4
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------CeEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TERLL 395 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l 395 (399)
+...+.||+|+||.||+|..+ .|+.||||.+... .....+.+.+|+++|++++|+|||++++.-... ....|
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 345688999999999999964 5999999998764 344456799999999999999999999876543 35788
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 95 vmEy 98 (732)
T KOG4250|consen 95 VMEY 98 (732)
T ss_pred EEee
Confidence 9987
No 143
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.60 E-value=2.1e-07 Score=86.09 Aligned_cols=77 Identities=22% Similarity=0.434 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.|+..++||+|+||.||++... .+..||+|.+.... ......+.+|+.++..++|+||+++++.+...+..+|||||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 3555688999999999999875 47889999987542 34456799999999999999999999999999999999997
No 144
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.60 E-value=1.4e-07 Score=89.74 Aligned_cols=77 Identities=21% Similarity=0.242 Sum_probs=65.6
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++... +++.+|+|.++... ....+.+..|+.++..++|+||+++.+++...+..+||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 5677899999999999999875 47899999997532 2234568899999999999999999999988899999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (330)
T cd05601 82 Y 82 (330)
T ss_pred C
Confidence 7
No 145
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.60 E-value=2e-07 Score=88.57 Aligned_cols=72 Identities=22% Similarity=0.203 Sum_probs=61.3
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++... .+..+|+|.+... .......+..|++++..++||||+++.+++...+..+|||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~ 76 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 76 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeC
Confidence 46899999999999864 5889999999753 223345678899999999999999999999999999999997
No 146
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.60 E-value=1.7e-07 Score=86.05 Aligned_cols=77 Identities=29% Similarity=0.500 Sum_probs=65.0
Q ss_pred CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS------VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
+|+..+.||+|+||.||++.. .+++.+|+|.+.... ....+.+.+|+.+++.++|+||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 356678999999999999986 457899999986432 1234678999999999999999999999999999999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+||
T Consensus 81 v~e~ 84 (268)
T cd06630 81 FVEW 84 (268)
T ss_pred EEec
Confidence 9997
No 147
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.60 E-value=1.2e-07 Score=87.14 Aligned_cols=78 Identities=26% Similarity=0.543 Sum_probs=65.8
Q ss_pred CCCcccCcccccCceEEEEEEEcC-C---cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-G---QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g---~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
.+|...+.||+|+||.||++.... + ..+++|.++.. .....+.+..|++++.+++|+||+++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 356678999999999999999753 3 36999998654 334456799999999999999999999999988999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 85 ~e~ 87 (268)
T cd05063 85 TEY 87 (268)
T ss_pred EEc
Confidence 997
No 148
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.60 E-value=1.8e-07 Score=86.66 Aligned_cols=77 Identities=26% Similarity=0.458 Sum_probs=65.5
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..++||+|.||.||++... +++.||+|++.... ....+.+.+|+.++..++|+||+++++.+..+...++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 4667789999999999999986 47899999986432 22335688999999999999999999999999999999997
No 149
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.60 E-value=2.1e-07 Score=87.13 Aligned_cols=78 Identities=26% Similarity=0.441 Sum_probs=67.9
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.+|...+.||+|.||.||++... ++..+++|.+........+.+.+|+.++..++|+||+++++.+..+...++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 45677789999999999999864 5789999999765545556789999999999999999999999999999999997
No 150
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.60 E-value=1.8e-07 Score=86.99 Aligned_cols=76 Identities=28% Similarity=0.357 Sum_probs=63.5
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|+||.||++... +++.+|+|.+.... ......+.+|+.+|..++|+|++++.+.+..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 445678999999999999875 47899999986542 22234578899999999999999999999889999999997
No 151
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.60 E-value=1.3e-07 Score=86.58 Aligned_cols=78 Identities=28% Similarity=0.440 Sum_probs=65.9
Q ss_pred hcCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+.+...++||+|+||.||++...++..+++|.+.... .....|.+|+.+++.++|+||+++.+.+.. ...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 345677889999999999999998777889999886543 334579999999999999999999999876 678899987
No 152
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.59 E-value=1.6e-07 Score=89.52 Aligned_cols=77 Identities=19% Similarity=0.258 Sum_probs=64.8
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...++||+|+||.||++..+. ++.+|+|.+.+. .......+..|+.++..++|+||+++.+.+...+..+||||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 56778999999999999999865 678999998643 12223458889999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 y 82 (332)
T cd05623 82 Y 82 (332)
T ss_pred c
Confidence 7
No 153
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.59 E-value=7.7e-08 Score=88.96 Aligned_cols=76 Identities=24% Similarity=0.473 Sum_probs=64.6
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..+.||+|.||.||+|... .+..||+|.+.... ....+.+.+|+.++.+++|+||+++++++...+..++|+||
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 445678999999999999875 47789999987542 33456799999999999999999999999999999999997
No 154
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.59 E-value=1.2e-07 Score=87.58 Aligned_cols=78 Identities=32% Similarity=0.548 Sum_probs=65.6
Q ss_pred CCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 394 (399)
++|.....||+|+||.||++..+. ...+++|.+...... ....+.+|++++.+++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 457778899999999999998642 357999988665433 4567999999999999999999999998888899
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+||||
T Consensus 85 lv~e~ 89 (275)
T cd05046 85 MILEY 89 (275)
T ss_pred EEEEe
Confidence 99997
No 155
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.59 E-value=2.1e-07 Score=88.41 Aligned_cols=73 Identities=18% Similarity=0.265 Sum_probs=61.6
Q ss_pred cCccccc--CceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 327 DNKLGQG--GFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 327 ~~~iG~G--~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.++||+| +|+.||++..+ +|+.||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|+||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 5789999 78999999874 5889999999654 223345677899999999999999999999999999999997
No 156
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.59 E-value=1e-07 Score=87.43 Aligned_cols=76 Identities=33% Similarity=0.559 Sum_probs=65.7
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.|...++||+|+||.||++...+ ++.|++|.+.... ....++.+|+.++..++|+||+++++++...+..+++|||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 46667899999999999999754 7889999987543 3356799999999999999999999999988899999996
No 157
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.59 E-value=1.3e-07 Score=88.48 Aligned_cols=79 Identities=27% Similarity=0.455 Sum_probs=65.3
Q ss_pred cCCCcccCcccccCceEEEEEEEc-----------------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-----------------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVR 382 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-----------------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~ 382 (399)
.++|+..++||+|+||.||++... +...+|+|.+... ......+|.+|+.++.+++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 345778899999999999987532 1346899998754 3344568999999999999999999
Q ss_pred eeEEEEeCCeEEEEEeC
Q 044262 383 LLGFSFEGTERLLIYEF 399 (399)
Q Consensus 383 l~g~~~~~~~~~lv~Ey 399 (399)
+++++...+..+++|||
T Consensus 84 ~~~~~~~~~~~~lv~e~ 100 (296)
T cd05095 84 LLAVCITSDPLCMITEY 100 (296)
T ss_pred EEEEEecCCccEEEEEe
Confidence 99999998999999996
No 158
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.59 E-value=2.9e-08 Score=91.41 Aligned_cols=72 Identities=32% Similarity=0.579 Sum_probs=55.8
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----EEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE-----RLLIY 397 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----~~lv~ 397 (399)
+...+++|.|+||.||+|.+.. ++.||||+...... ---+|+++|+++.|||||+|+-++....+ +.|||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 4556899999999999999854 68999998755432 23478999999999999999988765322 34566
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 102 ey 103 (364)
T KOG0658|consen 102 EY 103 (364)
T ss_pred Hh
Confidence 65
No 159
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.59 E-value=1.5e-07 Score=86.00 Aligned_cols=76 Identities=26% Similarity=0.488 Sum_probs=65.0
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...+.||+|.||.||++..+.+..+++|.+..... ....|.+|+.++..++|+||+++.+++...+..++|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 3566789999999999999987777899999865432 344788999999999999999999999888889999996
No 160
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.59 E-value=1.4e-07 Score=86.49 Aligned_cols=77 Identities=25% Similarity=0.474 Sum_probs=65.8
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++... ++..++||.+... ......++.+|+.++..++|+||+++++++..++..+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 4667789999999999999964 6889999988653 22334578999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 83 ~ 83 (267)
T cd08229 83 L 83 (267)
T ss_pred e
Confidence 6
No 161
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.59 E-value=1.3e-07 Score=89.29 Aligned_cols=77 Identities=31% Similarity=0.546 Sum_probs=61.5
Q ss_pred CCCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
.+|+..+.||+|+||.||+|.+.. +. .||+|.++.. .....+++.+|+.++..++|+||++++|++... ...+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 347778999999999999998643 33 4899998654 334456799999999999999999999998764 4567
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
++||
T Consensus 86 v~e~ 89 (316)
T cd05108 86 ITQL 89 (316)
T ss_pred eeec
Confidence 7775
No 162
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.59 E-value=2e-07 Score=86.87 Aligned_cols=77 Identities=30% Similarity=0.404 Sum_probs=66.0
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++... +++.+|+|.+.... ....+.+.+|++++..++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 4667789999999999999875 47899999986532 2334578999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (290)
T cd05580 82 Y 82 (290)
T ss_pred c
Confidence 7
No 163
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.58 E-value=2e-07 Score=88.13 Aligned_cols=76 Identities=28% Similarity=0.475 Sum_probs=64.9
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|+||.||++... ++..+++|.+... .......+.+|+.++++++|+|++++++++...+..+|||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 556788999999999999875 4789999998643 223345789999999999999999999999999999999997
No 164
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.58 E-value=1.7e-07 Score=87.44 Aligned_cols=78 Identities=27% Similarity=0.485 Sum_probs=66.3
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
++|...+.||+|.+|.||++... +++.+++|.+.... ......+.+|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 35677889999999999999975 57899999986532 2233568899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (294)
T PLN00009 82 Y 82 (294)
T ss_pred c
Confidence 7
No 165
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.58 E-value=1.8e-07 Score=85.10 Aligned_cols=76 Identities=26% Similarity=0.470 Sum_probs=67.0
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|...++||+|.||.||++.... +..+++|.+..... .+++.+|++++++++|+||+++.+.+......++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 567778999999999999999865 78899999865432 56899999999999999999999999999999999997
No 166
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.58 E-value=2.5e-07 Score=85.37 Aligned_cols=77 Identities=21% Similarity=0.393 Sum_probs=65.9
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...+.||.|+||.||++... +++.+++|.+.... ......+.+|+.++++++|+||+++.+.+..+...++|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 4566789999999999999975 47899999986542 33445789999999999999999999999999999999997
No 167
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.58 E-value=3.4e-08 Score=95.59 Aligned_cols=80 Identities=31% Similarity=0.510 Sum_probs=69.0
Q ss_pred hcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+...|...++||+|.-|.||.+.- ..+..||||++........+-.++|+.+|+..+|+|||+++..+...+++|+|||
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 345567778999999999999874 4578899999977655555568999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 351 y 351 (550)
T KOG0578|consen 351 Y 351 (550)
T ss_pred e
Confidence 8
No 168
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.58 E-value=1.7e-07 Score=88.98 Aligned_cols=75 Identities=23% Similarity=0.267 Sum_probs=59.9
Q ss_pred cccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHH---hcCCCCCccceeEEEEeCCeEEEEE
Q 044262 325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLV---ARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
...+.||+|+||.||++... .++.||||.++... ....+.+.+|+.++ ..++||||+++++++...+..+|||
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~ 81 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM 81 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence 45688999999999999875 47899999997531 22234566666554 5678999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 E~ 83 (324)
T cd05589 82 EY 83 (324)
T ss_pred cC
Confidence 97
No 169
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.58 E-value=2.4e-07 Score=88.19 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=60.7
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... .+..||+|.++.. .......+..|..++..+ +||||+++++++...+..+|||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~ 77 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEF 77 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeC
Confidence 46899999999999875 4789999999753 223345688899999888 799999999999999999999997
No 170
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.58 E-value=2e-07 Score=86.36 Aligned_cols=77 Identities=22% Similarity=0.330 Sum_probs=62.6
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLL-VARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...+.||+|+||.||++... +|+.||+|.++... .....++..|+.. ++.++|+||+++++++...+..+++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 5677789999999999999875 48899999987642 2333456667665 6667999999999999988999999987
No 171
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.58 E-value=1.8e-07 Score=86.73 Aligned_cols=77 Identities=35% Similarity=0.618 Sum_probs=64.7
Q ss_pred CCcccCcccccCceEEEEEEEcC-C-----cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-G-----QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g-----~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
.|...+.||+|+||.||+|.... + ..|++|.+... .......|.+|+.++.+++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 46677999999999999998643 2 47999998754 33345579999999999999999999999988888999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
+|||
T Consensus 86 ~~e~ 89 (283)
T cd05048 86 LFEY 89 (283)
T ss_pred EEec
Confidence 9997
No 172
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.57 E-value=1.7e-07 Score=87.59 Aligned_cols=76 Identities=28% Similarity=0.495 Sum_probs=64.5
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh-----hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ-----GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
|...++||+|+||.||+|... +++.|++|.+...... ....+..|++++..++|+||+++++++...+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 556688999999999999975 4889999999754322 2345788999999999999999999999988999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 e~ 83 (298)
T cd07841 82 EF 83 (298)
T ss_pred cc
Confidence 97
No 173
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.57 E-value=1.7e-07 Score=88.11 Aligned_cols=79 Identities=32% Similarity=0.458 Sum_probs=65.6
Q ss_pred cCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTE 392 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 392 (399)
.++|...++||+|+||.||++... .+..||+|.++... ....+.+.+|+.++.++ +|+||+++++.+...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 356778899999999999999741 24579999987542 33445799999999999 79999999999998899
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.+|++||
T Consensus 114 ~~lv~e~ 120 (302)
T cd05055 114 ILVITEY 120 (302)
T ss_pred eEEEEEc
Confidence 9999997
No 174
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.57 E-value=2.1e-07 Score=86.78 Aligned_cols=79 Identities=30% Similarity=0.410 Sum_probs=65.7
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-----------------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-----------------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVR 382 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-----------------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~ 382 (399)
...|...++||+|+||.||++.... +..||+|.+... .....+++.+|+.++.+++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3457778999999999999987642 245899998765 3344568999999999999999999
Q ss_pred eeEEEEeCCeEEEEEeC
Q 044262 383 LLGFSFEGTERLLIYEF 399 (399)
Q Consensus 383 l~g~~~~~~~~~lv~Ey 399 (399)
+++++...+..++++||
T Consensus 84 ~~~~~~~~~~~~lv~e~ 100 (296)
T cd05051 84 LLGVCTVDPPLCMIMEY 100 (296)
T ss_pred EEEEEecCCCcEEEEec
Confidence 99999988889999986
No 175
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.57 E-value=1.9e-07 Score=85.10 Aligned_cols=76 Identities=28% Similarity=0.548 Sum_probs=65.5
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.|...+.||+|+||.||++...++..+++|.+..... ...+|.+|++++..++|||++++++.+......++|+||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 4566789999999999999987788899999865432 345799999999999999999999999888889999997
No 176
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.57 E-value=2.3e-07 Score=85.34 Aligned_cols=76 Identities=30% Similarity=0.570 Sum_probs=61.4
Q ss_pred CcccCcccccCceEEEEEEEcC----CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE----- 392 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----- 392 (399)
|...++||+|+||.||+|.... +..||+|.++.. .......+.+|+..+..++|+||+++++.+...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 3457899999999999998743 367999998753 33345679999999999999999999999876554
Q ss_pred -EEEEEeC
Q 044262 393 -RLLIYEF 399 (399)
Q Consensus 393 -~~lv~Ey 399 (399)
.++++||
T Consensus 81 ~~~~v~e~ 88 (273)
T cd05035 81 KPMVILPF 88 (273)
T ss_pred ccEEEEec
Confidence 6888886
No 177
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.57 E-value=3e-07 Score=84.12 Aligned_cols=78 Identities=28% Similarity=0.448 Sum_probs=66.0
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-----VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
++|...+.||+|+||.||++... .+..+++|.+.... ......+.+|+.++.+++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46778899999999999999864 47899999986432 1223568899999999999999999999999999999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+||
T Consensus 82 v~e~ 85 (263)
T cd06625 82 FMEY 85 (263)
T ss_pred EEEE
Confidence 9996
No 178
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.57 E-value=2.6e-07 Score=84.48 Aligned_cols=76 Identities=28% Similarity=0.474 Sum_probs=66.3
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++... ++..+++|.++.... ...+.+.+|+.+++.++|+||+++++.+...+..++|+||
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 556789999999999999875 578999999876543 3566899999999999999999999999889999999997
No 179
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.57 E-value=1.9e-07 Score=87.32 Aligned_cols=78 Identities=28% Similarity=0.460 Sum_probs=67.2
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.+|...+.||+|+||.||++... ++..+++|.+........+.+.+|+.++.+++|||++++.+.+...+..++|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 45677789999999999999864 5788999998655444456789999999999999999999999999999999997
No 180
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.57 E-value=2.3e-07 Score=84.25 Aligned_cols=72 Identities=31% Similarity=0.548 Sum_probs=63.3
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++...+++.|++|.+..... .....+.+|+.++.+++|+||+++++++......++|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEc
Confidence 46899999999999987789999999876433 3456899999999999999999999999999999999996
No 181
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.57 E-value=1.3e-07 Score=86.71 Aligned_cols=77 Identities=26% Similarity=0.459 Sum_probs=63.6
Q ss_pred cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.+.|...++||+|+||.||++...+...||+|.+.... ...+.|.+|+.++..++|+||+++.+... .+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 34577789999999999999988766789999987532 23457999999999999999999999864 4567899987
No 182
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.56 E-value=1.9e-07 Score=85.94 Aligned_cols=76 Identities=24% Similarity=0.416 Sum_probs=62.7
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh----------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV----------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE 392 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~----------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 392 (399)
|...+.||+|+||.||+|... +++.+|+|.++.... ...+.+.+|+.++..++|+|++++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 455789999999999999864 588999998853211 112467889999999999999999999998899
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++|+||
T Consensus 83 ~~lv~e~ 89 (272)
T cd06629 83 LSIFLEY 89 (272)
T ss_pred eEEEEec
Confidence 9999997
No 183
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=1.8e-07 Score=89.96 Aligned_cols=79 Identities=25% Similarity=0.482 Sum_probs=65.7
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC----Ch-hhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN----SV-QGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTER 393 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~ 393 (399)
...+...+.||+|.||.|+.|... .++.||+|.+... .. ...+...+|+.+|+.++ ||||+++..+.......
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 456777899999999999999764 4799999977653 11 22345668999999999 99999999999999999
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++||||
T Consensus 96 ~ivmEy 101 (370)
T KOG0583|consen 96 YIVMEY 101 (370)
T ss_pred EEEEEe
Confidence 999998
No 184
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.56 E-value=1.5e-07 Score=86.15 Aligned_cols=76 Identities=26% Similarity=0.473 Sum_probs=63.7
Q ss_pred CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.|...++||+|+||.||++..+++..+++|.+..... ..+.|.+|+.++.+++|+|++++++++. .+..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 45667789999999999999987788899999865432 3457999999999999999999999874 5567899986
No 185
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.56 E-value=1.5e-07 Score=86.96 Aligned_cols=79 Identities=30% Similarity=0.569 Sum_probs=66.5
Q ss_pred cCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER 393 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 393 (399)
.++|...+.||+|+||.||++.... +..||+|.+.... ......+.+|+.++..++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 3457778999999999999998743 3579999987553 34456799999999999999999999999988999
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++||||
T Consensus 85 ~~v~e~ 90 (277)
T cd05032 85 LVVMEL 90 (277)
T ss_pred EEEEec
Confidence 999997
No 186
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.56 E-value=2.5e-07 Score=85.15 Aligned_cols=72 Identities=29% Similarity=0.462 Sum_probs=59.0
Q ss_pred CcccccCceEEEEEEEcCC---cEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHG---QEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g---~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++...++ ..+++|.+.... ....+.|.+|+.++..++||||+++++.+......+|||||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~ 76 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEY 76 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEec
Confidence 3689999999999986443 346677765442 34456899999999999999999999999988899999997
No 187
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.56 E-value=1.5e-07 Score=87.64 Aligned_cols=82 Identities=22% Similarity=0.421 Sum_probs=67.4
Q ss_pred HhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262 318 RDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE 389 (399)
Q Consensus 318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 389 (399)
....++|...+.||+|+||.||++.... ...+|+|.+... .......+.+|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 3445567778999999999999998642 357999998754 333445789999999999 89999999999998
Q ss_pred CCeEEEEEeC
Q 044262 390 GTERLLIYEF 399 (399)
Q Consensus 390 ~~~~~lv~Ey 399 (399)
....+++|||
T Consensus 88 ~~~~~li~e~ 97 (293)
T cd05053 88 EGPLYVVVEY 97 (293)
T ss_pred CCCeEEEEEe
Confidence 8899999997
No 188
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.56 E-value=2.8e-07 Score=85.72 Aligned_cols=76 Identities=28% Similarity=0.364 Sum_probs=63.6
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..++||+|+||.||++... .++.+|+|.+.... ......+.+|+.++..++|+|++++.+.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 455688999999999999875 47899999986532 22234578899999999999999999999989999999997
No 189
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.56 E-value=2.3e-07 Score=86.85 Aligned_cols=78 Identities=27% Similarity=0.491 Sum_probs=67.8
Q ss_pred CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.+|...+.||.|.||.||++.. .+++.|++|.+........+.+.+|+.+++.++|+||+++++.+...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 4577788999999999999985 45889999998765444556789999999999999999999999999999999997
No 190
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.56 E-value=2.4e-07 Score=87.21 Aligned_cols=76 Identities=25% Similarity=0.526 Sum_probs=64.2
Q ss_pred CcccCcccccCceEEEEEEEcC---CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLL 395 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 395 (399)
|...++||+|+||.||++.... +..+|+|.+.... ......+.+|+.++.+++||||+++.+++... +..+|
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 4566889999999999999754 6899999997632 33345688999999999999999999999887 77999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 82 v~e~ 85 (316)
T cd07842 82 LFDY 85 (316)
T ss_pred EEeC
Confidence 9997
No 191
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.56 E-value=3.8e-07 Score=83.12 Aligned_cols=76 Identities=20% Similarity=0.314 Sum_probs=64.9
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|+||.||++... .+..+++|.++.. .....+.+.+|+.++..++|+||+++++.+...+..++++||
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 456789999999999999875 4788999998643 333456788999999999999999999999999999999997
No 192
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.56 E-value=2.4e-07 Score=85.94 Aligned_cols=70 Identities=29% Similarity=0.383 Sum_probs=59.3
Q ss_pred ccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|+||.||++... +++.+|+|.+..... ...+.+..|+.++..++|+||+++.+++......+|||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeC
Confidence 699999999999875 578999999865322 2235678899999999999999999999888899999997
No 193
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.55 E-value=2.3e-07 Score=85.41 Aligned_cols=80 Identities=31% Similarity=0.529 Sum_probs=65.2
Q ss_pred hhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC------
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG------ 390 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~------ 390 (399)
.+.+.|...+.||+|+||.||+|.... ++.+|+|.+.... .....+.+|+.++.++ +|+||+++++.+...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 455667778999999999999998754 7889999986543 3345788999999998 799999999998753
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
+..+++|||
T Consensus 82 ~~~~iv~e~ 90 (272)
T cd06637 82 DQLWLVMEF 90 (272)
T ss_pred cEEEEEEEc
Confidence 457899997
No 194
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.55 E-value=1.5e-07 Score=85.71 Aligned_cols=76 Identities=24% Similarity=0.503 Sum_probs=64.9
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++..+. +..+++|.+... .....+.+.+|+.+++.++|+||+++++.+...+..++|+||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5667899999999999999864 788999998653 223345788999999999999999999999989999999997
No 195
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.55 E-value=2.9e-07 Score=83.87 Aligned_cols=76 Identities=20% Similarity=0.387 Sum_probs=65.3
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..++||+|.||.+|++... +++.+++|.+... .....+++.+|+.++++++|+||+++.+++...+..+||+||
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 556789999999999999864 4789999998643 334456799999999999999999999999989999999997
No 196
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.55 E-value=1.9e-07 Score=87.41 Aligned_cols=80 Identities=25% Similarity=0.493 Sum_probs=65.6
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT----- 391 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----- 391 (399)
..++|+..++||+|.||.||+|..+. ++.|++|.++... ......+.+|++++..++||||+++++++...+
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 34567788999999999999999864 7899999996542 223346788999999999999999999887654
Q ss_pred -----eEEEEEeC
Q 044262 392 -----ERLLIYEF 399 (399)
Q Consensus 392 -----~~~lv~Ey 399 (399)
..+||+||
T Consensus 85 ~~~~~~~~lv~e~ 97 (302)
T cd07864 85 KKDKGAFYLVFEY 97 (302)
T ss_pred cccCCcEEEEEcc
Confidence 68899987
No 197
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.55 E-value=3.6e-07 Score=83.46 Aligned_cols=77 Identities=22% Similarity=0.332 Sum_probs=67.8
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...+.||+|++|.||++.... +..+++|.+..... .....+.+|+..+.+++|+||+++.+.+...+..++|+||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 56777999999999999999865 88999999876543 4456899999999999999999999999999999999997
No 198
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.55 E-value=2.4e-07 Score=90.41 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=62.3
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..|...++||+|+||.||++... .++.||+|... ...+.+|+.++.+++|||||++++++......++|+||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 45788899999999999999864 47889999753 23578999999999999999999999888889999986
No 199
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.55 E-value=3.6e-07 Score=86.97 Aligned_cols=72 Identities=19% Similarity=0.231 Sum_probs=60.0
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++.... ++.+|+|.+++. .......+.+|+.++.++ +||||+++++++...+..+|||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 77 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 77 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeC
Confidence 468999999999999754 788999999753 223345678898888776 899999999999999999999997
No 200
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.55 E-value=3.4e-07 Score=83.97 Aligned_cols=76 Identities=32% Similarity=0.512 Sum_probs=63.2
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChh---------hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQ---------GELEFKNEVLLVARLQHRNLVRLLGFSFEGTER 393 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~---------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 393 (399)
|.....||+|+||.||+|... ++..+++|.+...... ..+.+.+|+.++.+++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 455689999999999999874 4788999988653211 124688999999999999999999999999999
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 82 ~lv~e~ 87 (267)
T cd06628 82 NIFLEY 87 (267)
T ss_pred EEEEEe
Confidence 999997
No 201
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.55 E-value=2.7e-07 Score=92.45 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=65.3
Q ss_pred CcccCcccccCceEEEEEEEc-C-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-H-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++... + +..|++|.+..........+.+|+.++..++|||||++++++...+..+|||||
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 667789999999999999753 3 567889987655555556788999999999999999999999999999999998
No 202
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.54 E-value=1.7e-07 Score=87.21 Aligned_cols=78 Identities=29% Similarity=0.500 Sum_probs=63.9
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT--ERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~E 398 (399)
.++...+.||+|.||.||.+...+ |...|||.....+....+.+.+|+.+|.+++|||||+..|...... ...|.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 345667999999999999999865 8899999987653222567899999999999999999999844433 6889999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 97 y 97 (313)
T KOG0198|consen 97 Y 97 (313)
T ss_pred c
Confidence 8
No 203
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.54 E-value=3.2e-07 Score=85.00 Aligned_cols=76 Identities=22% Similarity=0.380 Sum_probs=65.7
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|.||.||++... ++..|++|.+.... ......+.+|+.++..++|+||+++++++..+...++|+||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 556788999999999999975 58899999987543 33356799999999999999999999999999999999997
No 204
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.54 E-value=3.7e-07 Score=83.20 Aligned_cols=76 Identities=21% Similarity=0.340 Sum_probs=65.1
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..++||+|.||.||.+... ++..+++|.+... +......+.+|+.++++++|+||+++++++...+..+++|||
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 566789999999999888754 4788999987643 344556799999999999999999999999999999999997
No 205
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.54 E-value=2.7e-07 Score=88.88 Aligned_cols=79 Identities=23% Similarity=0.354 Sum_probs=64.7
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------ 391 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 391 (399)
.++|...+.||+|+||.||++... .+..||+|.+... .......+.+|+.++..++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 356788899999999999999864 4789999998653 2334557889999999999999999999886432
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
..++||||
T Consensus 100 ~~~lv~e~ 107 (359)
T cd07876 100 DVYLVMEL 107 (359)
T ss_pred eeEEEEeC
Confidence 47899997
No 206
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.54 E-value=2.1e-07 Score=86.34 Aligned_cols=76 Identities=36% Similarity=0.552 Sum_probs=63.1
Q ss_pred CcccCcccccCceEEEEEEEcC------CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
|...++||+|+||.||+|...+ +..||+|.+..... .....|..|+.++..++||||+++++++...+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 4556889999999999998632 46799999975432 3345688999999999999999999999888889999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 87 ~e~ 89 (283)
T cd05091 87 FSY 89 (283)
T ss_pred EEc
Confidence 986
No 207
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.53 E-value=3.6e-07 Score=85.86 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=65.7
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|.||.||++.... ++.|++|.+.... ......+.+|+.++..++|+||+++++.+..++..+||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 56677999999999999998754 6889999987543 2234578899999999999999999999998899999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (305)
T cd05609 82 Y 82 (305)
T ss_pred c
Confidence 7
No 208
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.53 E-value=3.3e-07 Score=86.86 Aligned_cols=72 Identities=24% Similarity=0.254 Sum_probs=59.9
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++.... ++.||+|.++.. .....+.+..|.+++..+ +||||+++++++...+..+|||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~ 77 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEY 77 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeC
Confidence 468999999999998754 789999998653 223345678898888865 899999999999999999999997
No 209
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.53 E-value=1.8e-07 Score=86.74 Aligned_cols=77 Identities=23% Similarity=0.402 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..++||+|.||.||++..++ ++.|++|.++.. .....+.+.+|++++..++|+||+++++++..++..++++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 46677899999999999998764 789999998653 223346789999999999999999999999999999999997
No 210
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.53 E-value=2.4e-07 Score=87.08 Aligned_cols=78 Identities=29% Similarity=0.549 Sum_probs=64.2
Q ss_pred CCCcccCcccccCceEEEEEEEcC-Cc--EEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ--EIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 396 (399)
++|...+.||+|+||.||++.... +. .+++|.++.. .......+.+|++++.++ +|+||+++.+++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 356777999999999999998743 43 4688877654 334456789999999999 899999999999888889999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 87 ~e~ 89 (303)
T cd05088 87 IEY 89 (303)
T ss_pred EEe
Confidence 997
No 211
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.53 E-value=3.3e-07 Score=84.77 Aligned_cols=77 Identities=30% Similarity=0.524 Sum_probs=64.1
Q ss_pred CCcccCcccccCceEEEEEEEc-----CCcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERL 394 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 394 (399)
.|...+.||+|+||.||++.+. .+..+|||.+...... ..+.|.+|+.++..++|+||+++.+++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4556689999999999999864 2578999999765432 45689999999999999999999999876 55789
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
++|||
T Consensus 85 lv~e~ 89 (284)
T cd05038 85 LIMEY 89 (284)
T ss_pred EEEec
Confidence 99997
No 212
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.53 E-value=2.7e-07 Score=86.80 Aligned_cols=79 Identities=23% Similarity=0.397 Sum_probs=65.5
Q ss_pred cCCCcccCcccccCceEEEEEEEcC--------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG 390 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 390 (399)
.+.|...+.||+|+||.||++...+ ...+|+|.++.. ......++..|+.++..+ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 4567888999999999999987521 246999998754 234455788999999999 799999999999999
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
+..++||||
T Consensus 97 ~~~~lv~e~ 105 (307)
T cd05098 97 GPLYVIVEY 105 (307)
T ss_pred CceEEEEec
Confidence 999999997
No 213
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.52 E-value=3.7e-07 Score=86.48 Aligned_cols=72 Identities=25% Similarity=0.324 Sum_probs=58.2
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... +++.+|+|.+.+.. ......+..|.. ++..++||||+++++.+...+..+|||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 77 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDY 77 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcC
Confidence 46999999999999975 47899999986532 122345666664 57889999999999999999999999997
No 214
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.52 E-value=3.5e-07 Score=84.68 Aligned_cols=70 Identities=27% Similarity=0.336 Sum_probs=58.5
Q ss_pred ccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|+||.||++..+. |+.+|+|.+.... ......+..|++++.+++||||+++.+.+..+...++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSL 74 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEec
Confidence 6999999999998754 8899999986431 12233567799999999999999999999888999999997
No 215
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.52 E-value=2.2e-07 Score=86.23 Aligned_cols=85 Identities=26% Similarity=0.491 Sum_probs=68.6
Q ss_pred hhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe--
Q 044262 314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE-- 389 (399)
Q Consensus 314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~-- 389 (399)
++.+..+.++|...+.||+|+||.||++... .++.+++|.+.... .....+.+|+.++.++ +|+||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 4556677888999999999999999999875 47889999886532 2234688899999998 69999999998742
Q ss_pred ---CCeEEEEEeC
Q 044262 390 ---GTERLLIYEF 399 (399)
Q Consensus 390 ---~~~~~lv~Ey 399 (399)
++..++||||
T Consensus 89 ~~~~~~~~lv~e~ 101 (286)
T cd06638 89 VKNGDQLWLVLEL 101 (286)
T ss_pred cCCCCeEEEEEee
Confidence 3568999997
No 216
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.52 E-value=4.6e-07 Score=84.69 Aligned_cols=73 Identities=29% Similarity=0.419 Sum_probs=64.2
Q ss_pred cCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 327 DNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+||+|+||.||++... ++..|++|.+..........+.+|+.++..++|+||+++++.+..++..++||||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 367999999999999875 5889999998655555566799999999999999999999999999999999997
No 217
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.52 E-value=4.7e-07 Score=86.56 Aligned_cols=78 Identities=17% Similarity=0.155 Sum_probs=60.0
Q ss_pred hhcCCCcccCcccccCceEEEEEEEc--CCcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLS--HGQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT 391 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~--~g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 391 (399)
...+.|...++||+|+||.||++... +++.+|||++... .....+.|.+|+++|.+++|+|++..+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 34466888999999999999999875 4677899987533 12234569999999999999999964322 24
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
..+|||||
T Consensus 92 ~~~LVmE~ 99 (365)
T PRK09188 92 KDGLVRGW 99 (365)
T ss_pred CcEEEEEc
Confidence 57999997
No 218
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.51 E-value=3.9e-07 Score=82.88 Aligned_cols=75 Identities=37% Similarity=0.641 Sum_probs=64.4
Q ss_pred cccCcccccCceEEEEEEEcC-----CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 325 STDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
...+.||+|+||.||++...+ +..||+|.+...... ..+.+..|+.++..++|+||+++++.+...+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456889999999999999854 378999999765332 56689999999999999999999999998889999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (258)
T smart00219 82 Y 82 (258)
T ss_pred c
Confidence 6
No 219
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.51 E-value=2.8e-07 Score=85.95 Aligned_cols=77 Identities=26% Similarity=0.550 Sum_probs=65.8
Q ss_pred CCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
+|...+.||+|+||.||++... ++..+++|.+........+.+.+|+.++.+++|+||+++.+++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4666789999999999999752 2456899998766655567899999999999999999999999998999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 86 ~e~ 88 (291)
T cd05094 86 FEY 88 (291)
T ss_pred Eec
Confidence 997
No 220
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.51 E-value=2.2e-07 Score=87.04 Aligned_cols=74 Identities=30% Similarity=0.422 Sum_probs=64.2
Q ss_pred ccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 326 TDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 326 ~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
....||+|+||.||++... ++..|++|.+........+.+.+|+.++..++||||+++++.+..++..++|+||
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 3457999999999999875 5789999999765444556789999999999999999999999999999999997
No 221
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.51 E-value=1.6e-07 Score=85.81 Aligned_cols=77 Identities=22% Similarity=0.259 Sum_probs=65.9
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...++||+|+||.||++... .+..+++|.+.... ....+.+.+|++++.+++||||+++.+.+..++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 3566789999999999999975 47899999986532 2345679999999999999999999999988899999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 81 ~ 81 (258)
T cd05578 81 L 81 (258)
T ss_pred C
Confidence 7
No 222
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.51 E-value=3.3e-07 Score=83.89 Aligned_cols=77 Identities=18% Similarity=0.242 Sum_probs=66.4
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..+.||+|+||.||++... +++.+++|.+.... .....++.+|++++.+++|+||+++++.+...+..+|++||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 4556789999999999999986 47889999987653 34456799999999999999999999999999999999996
No 223
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.51 E-value=4.4e-07 Score=84.43 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=63.8
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E 398 (399)
+|...++||.|.+|.||++... .++.+|+|.+... .......+.+|++++..++|+||+++++++... +..+||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 4666789999999999999985 4788999998754 223456799999999999999999999988653 46899999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (287)
T cd06621 82 Y 82 (287)
T ss_pred e
Confidence 7
No 224
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.51 E-value=3.8e-07 Score=86.36 Aligned_cols=72 Identities=25% Similarity=0.274 Sum_probs=60.1
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++.... +..+|+|.+++. .......+..|.+++..+ +||||+++++++...+..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 77 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEY 77 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence 468999999999998864 778999999753 223345678888888877 799999999999999999999997
No 225
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.51 E-value=5.9e-07 Score=82.19 Aligned_cols=77 Identities=21% Similarity=0.349 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|+..+.||.|+||.||++... ++..+++|.+.... ......+.+|++.++.++|+||+++.+.+..++..++|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 5677899999999999999965 47789999986542 23456799999999999999999999999999999999986
No 226
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.51 E-value=3.3e-07 Score=83.58 Aligned_cols=71 Identities=34% Similarity=0.581 Sum_probs=60.7
Q ss_pred CcccccCceEEEEEEEcC--C--cEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH--G--QEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~--g--~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|++|.||++.+.. + ..||+|.+..... ...+.+.+|+.++.+++|+||+++++.+.. ...++|+||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEe
Confidence 468999999999998743 2 3689999977654 556789999999999999999999999887 888999986
No 227
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.51 E-value=4.4e-07 Score=84.28 Aligned_cols=80 Identities=26% Similarity=0.461 Sum_probs=69.6
Q ss_pred hhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
..++.|...+.||+|.||.||++..+ .+..+++|.+..... ....+.+|++++..++|+|++++++.+...+..++++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 45566777899999999999999986 478899999976543 4567899999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 95 e~ 96 (286)
T cd06614 95 EY 96 (286)
T ss_pred ec
Confidence 97
No 228
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.51 E-value=2.7e-07 Score=84.09 Aligned_cols=70 Identities=31% Similarity=0.602 Sum_probs=58.0
Q ss_pred CcccccCceEEEEEEEcCCc-----------EEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 328 NKLGQGGFGAVYKGRLSHGQ-----------EIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~-----------~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
++||+|+||.||+|...+.. .+++|.+...... ...|.+|+.++++++|+||++++|++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46899999999999985432 4788877654333 5689999999999999999999999887 778999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 79 ~e~ 81 (259)
T cd05037 79 EEY 81 (259)
T ss_pred EEc
Confidence 997
No 229
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.51 E-value=1.9e-07 Score=87.23 Aligned_cols=76 Identities=26% Similarity=0.410 Sum_probs=65.6
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.....||+|+||.||++... ++..||+|.+........+.+.+|+..+..++|+||+++++.+..++..++||||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 344577999999999999874 4789999998765555566799999999999999999999999999999999997
No 230
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.51 E-value=4.2e-07 Score=83.06 Aligned_cols=70 Identities=29% Similarity=0.471 Sum_probs=57.8
Q ss_pred cccccCceEEEEEEEc---CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 329 KLGQGGFGAVYKGRLS---HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 329 ~iG~G~fG~Vykg~~~---~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+||+|+||.||+|.++ ++..+|+|.++.. .....+++.+|+.++..++|+||++++|++. .+..++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEec
Confidence 6899999999999763 4678999998644 2334567999999999999999999999874 5567899987
No 231
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.51 E-value=6.1e-08 Score=87.73 Aligned_cols=80 Identities=26% Similarity=0.409 Sum_probs=68.8
Q ss_pred hhhHHhhcCCCcccCcccccCceEEEEEE-EcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 044262 314 FSTIRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT 391 (399)
Q Consensus 314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~-~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 391 (399)
++++-+-+ .++||+|+++.|-..+ +..|.++|||++.+.....+....+|++++... .|+||++|+.++.++.
T Consensus 75 F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 45555444 4789999999998776 467899999999988777788899999998876 5999999999999999
Q ss_pred eEEEEEe
Q 044262 392 ERLLIYE 398 (399)
Q Consensus 392 ~~~lv~E 398 (399)
..|||||
T Consensus 150 ~FYLVfE 156 (463)
T KOG0607|consen 150 RFYLVFE 156 (463)
T ss_pred eEEEEEe
Confidence 9999998
No 232
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.51 E-value=3.7e-07 Score=96.54 Aligned_cols=82 Identities=22% Similarity=0.380 Sum_probs=66.8
Q ss_pred HhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCe
Q 044262 318 RDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTE 392 (399)
Q Consensus 318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~ 392 (399)
......|.+.++||+|+||.||++.... +..+|+|.+... .......|..|+.+|..++|||||++++++.. ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3444678888999999999999998754 678999988653 33345679999999999999999999998764 356
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
++|||||
T Consensus 89 lyIVMEY 95 (1021)
T PTZ00266 89 LYILMEF 95 (1021)
T ss_pred EEEEEeC
Confidence 8999997
No 233
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.51 E-value=5e-07 Score=82.19 Aligned_cols=76 Identities=20% Similarity=0.370 Sum_probs=65.1
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++... .+..+++|.+... .......+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 566789999999999999874 4788999998654 333456799999999999999999999999888999999997
No 234
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.50 E-value=3.1e-07 Score=85.61 Aligned_cols=78 Identities=22% Similarity=0.437 Sum_probs=64.7
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv 396 (399)
++|...+.||+|.||.||++..+. ++.+++|.++.... .....+.+|+.++.+++||||+++.+++... +..+||
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 356777999999999999999864 78899999975422 2234578899999999999999999998877 789999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 85 ~e~ 87 (293)
T cd07843 85 MEY 87 (293)
T ss_pred ehh
Confidence 997
No 235
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.50 E-value=5.3e-07 Score=82.70 Aligned_cols=78 Identities=27% Similarity=0.414 Sum_probs=62.9
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TER 393 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 393 (399)
.+|...++||+|+||.||++...+ +..|++|.+... .....+.+.+|+.++.+++|+||+++.+++... ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 357778999999999999998754 789999988532 122345788999999999999999999987653 457
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 82 ~~v~e~ 87 (265)
T cd06652 82 SIFMEH 87 (265)
T ss_pred EEEEEe
Confidence 789986
No 236
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.50 E-value=3.4e-07 Score=85.66 Aligned_cols=78 Identities=24% Similarity=0.473 Sum_probs=64.6
Q ss_pred CCCcccCcccccCceEEEEEEEcC-C--cEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-G--QEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g--~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 396 (399)
++|...++||+|+||.||++...+ + ..+++|.++.. .....+.|.+|+.++.++ +||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 457778999999999999998854 3 24788888753 334456799999999999 799999999999888889999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 82 ~e~ 84 (297)
T cd05089 82 IEY 84 (297)
T ss_pred EEe
Confidence 997
No 237
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.50 E-value=7e-07 Score=84.30 Aligned_cols=76 Identities=28% Similarity=0.457 Sum_probs=64.1
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|+||.||+|... .+..+++|.+... .......+.+|+.++..++|+|++++.+++...+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 444578999999999999874 4788999998643 223345788999999999999999999999999999999997
No 238
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.50 E-value=3.4e-07 Score=87.09 Aligned_cols=83 Identities=24% Similarity=0.374 Sum_probs=67.5
Q ss_pred HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCe
Q 044262 317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTE 392 (399)
Q Consensus 317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~ 392 (399)
+...+++|...++||+|+||.||++... ++..||+|++... .....+.+..|+.++..++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3445677888999999999999999864 5889999988643 22334578899999999999999999998865 456
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++++||
T Consensus 85 ~~lv~e~ 91 (328)
T cd07856 85 IYFVTEL 91 (328)
T ss_pred EEEEeeh
Confidence 8899986
No 239
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.50 E-value=1e-07 Score=87.22 Aligned_cols=72 Identities=28% Similarity=0.475 Sum_probs=60.5
Q ss_pred CcccccCceEEEEEEEcC--------CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++.... ...+++|.+........+.+..|+.++..++|||++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 468999999999998642 234888888655545556799999999999999999999999998899999997
No 240
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.50 E-value=4.2e-07 Score=83.12 Aligned_cols=70 Identities=27% Similarity=0.464 Sum_probs=57.3
Q ss_pred cccccCceEEEEEEEc---CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 329 KLGQGGFGAVYKGRLS---HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 329 ~iG~G~fG~Vykg~~~---~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.||+|+||.||+|.+. .+..||+|.+.... ....+.|.+|+.++.+++|+||+++++++. .+..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEe
Confidence 4899999999999864 34579999987653 333467999999999999999999999874 5578899997
No 241
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.50 E-value=5.3e-07 Score=82.88 Aligned_cols=76 Identities=25% Similarity=0.446 Sum_probs=62.4
Q ss_pred CcccCcccccCceEEEEEEEcC--CcEEEEEEecCC----------ChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH--GQEIAVKRLSKN----------SVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEG 390 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~--g~~vavK~l~~~----------~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~ 390 (399)
|+..+.||+|+||.||++.... +..+|+|.+... ......++.+|+.++.+ ++|+||+++++.+...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5667899999999999999865 578999987532 12233567889988875 7999999999999999
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
+..+++|||
T Consensus 82 ~~~~lv~e~ 90 (269)
T cd08528 82 DRLYIVMDL 90 (269)
T ss_pred CeEEEEEec
Confidence 999999997
No 242
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.49 E-value=3.6e-07 Score=86.28 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=67.6
Q ss_pred cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.+.|+..++||.|.-+.||+|.. +.++.||||++.-... .....+.+|+..|..++||||++....+..+.++|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 35677789999999999999985 4579999999965422 225689999999999999999999999999999999997
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 105 f 105 (516)
T KOG0582|consen 105 F 105 (516)
T ss_pred h
Confidence 6
No 243
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.49 E-value=5.2e-07 Score=85.65 Aligned_cols=72 Identities=25% Similarity=0.325 Sum_probs=58.2
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... +|+.+|+|.+... .......+..|.. ++..++||||+++++.+...+..+|||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~ 77 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDF 77 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcC
Confidence 46899999999999874 4889999998653 2223345666665 46779999999999999999999999997
No 244
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.49 E-value=5.1e-07 Score=85.39 Aligned_cols=72 Identities=24% Similarity=0.281 Sum_probs=58.8
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++.... ++.||+|.++... ......+..|..++.. ++||||+++++++...+..+|||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey 77 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEY 77 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeC
Confidence 468999999999999754 7889999997531 1223456778877775 5999999999999999999999997
No 245
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.49 E-value=5.3e-07 Score=82.98 Aligned_cols=75 Identities=27% Similarity=0.551 Sum_probs=59.4
Q ss_pred cccCcccccCceEEEEEEEcCC-c--EEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------CeE
Q 044262 325 STDNKLGQGGFGAVYKGRLSHG-Q--EIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TER 393 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~g-~--~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~ 393 (399)
...++||+|+||.||+|..... . .+|+|.++.. +....+.|.+|+.++..++|+||+++++.+... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4568999999999999998543 2 5899988653 344456799999999999999999999987542 246
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 82 ~~v~e~ 87 (272)
T cd05075 82 VVILPF 87 (272)
T ss_pred EEEEEe
Confidence 788886
No 246
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.49 E-value=3.5e-07 Score=83.34 Aligned_cols=75 Identities=35% Similarity=0.597 Sum_probs=63.5
Q ss_pred cccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhH--HHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGE--LEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~--~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+..+.||+|+||.||++.... ++.+|+|.+........ ....+|+.++.+++|+||++++++.......++||||
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 346789999999999999865 56899999987754433 2346699999999999999999999999999999986
No 247
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.49 E-value=3.8e-07 Score=84.77 Aligned_cols=77 Identities=22% Similarity=0.348 Sum_probs=63.9
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+|...++||+|+||.||++... .++.+|+|.+.... ......+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3445678999999999999875 47899999987542 234557899999999996 99999999999888889999986
No 248
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.49 E-value=3.7e-07 Score=84.58 Aligned_cols=75 Identities=31% Similarity=0.524 Sum_probs=64.0
Q ss_pred cccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+..++||+|.+|.||++... +|..|++|++.... ......+.+|++.+.+++|+|++++++++..++..+++|||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 45688999999999999875 58899999986542 22335688999999999999999999999999999999997
No 249
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.49 E-value=2.2e-07 Score=88.79 Aligned_cols=81 Identities=23% Similarity=0.377 Sum_probs=63.9
Q ss_pred hhcCCCcccCcccccCceEEEEEEEc------CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLS------HGQEIAVKRLSKNS-VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG 390 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~------~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 390 (399)
.+.++|...++||+|+||.||++... .++.||+|.++... ....+.+..|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 34456788899999999999999642 24689999987542 23345688999999999 899999999988654
Q ss_pred -CeEEEEEeC
Q 044262 391 -TERLLIYEF 399 (399)
Q Consensus 391 -~~~~lv~Ey 399 (399)
...++++||
T Consensus 84 ~~~~~~v~ey 93 (337)
T cd05054 84 GGPLMVIVEY 93 (337)
T ss_pred CCCEEEEEec
Confidence 567888987
No 250
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.48 E-value=5.7e-07 Score=85.28 Aligned_cols=72 Identities=24% Similarity=0.324 Sum_probs=58.0
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... +++.||+|.+.... ......++.|.. ++..++||||+++++.+...+..+|||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~ 77 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDY 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcC
Confidence 46899999999999985 48899999986531 122345566655 56789999999999999999999999997
No 251
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.48 E-value=3.7e-07 Score=85.67 Aligned_cols=79 Identities=23% Similarity=0.423 Sum_probs=65.0
Q ss_pred cCCCcccCcccccCceEEEEEEEc--------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG 390 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~--------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 390 (399)
.++|...+.||+|+||.||++... ++..|++|.+... ......++.+|+.++..+ +|+||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 445677899999999999999741 2347999988654 234456799999999999 899999999999988
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
...+|+|||
T Consensus 94 ~~~~lv~e~ 102 (304)
T cd05101 94 GPLYVIVEY 102 (304)
T ss_pred CceEEEEec
Confidence 899999997
No 252
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.48 E-value=5.5e-07 Score=93.79 Aligned_cols=78 Identities=23% Similarity=0.271 Sum_probs=66.9
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|...++||+|+||.||++... .++.||+|.++... ......+..|+.++..++|+||+++++.+...+..+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 45777899999999999999986 47899999986542 233457889999999999999999999998899999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 84 Ey 85 (669)
T cd05610 84 EY 85 (669)
T ss_pred eC
Confidence 97
No 253
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.48 E-value=1.9e-08 Score=90.11 Aligned_cols=75 Identities=23% Similarity=0.462 Sum_probs=66.1
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
-|...++||+|.||.|||+..+. |..||||..... .+.++.+.|+.+|.+...+.+|+.+|.+.....+|+||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 35567899999999999999865 889999988654 3456899999999999999999999999999999999998
No 254
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.48 E-value=3.5e-07 Score=86.33 Aligned_cols=80 Identities=25% Similarity=0.435 Sum_probs=65.2
Q ss_pred hcCCCcccCcccccCceEEEEEEEc--------CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS--------HGQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE 389 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~--------~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 389 (399)
..++|...++||+|+||.||++... ....+|+|.++.. ......++.+|+.++..+ +|+||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3456777899999999999998742 2356899998754 333456789999999999 69999999999988
Q ss_pred CCeEEEEEeC
Q 044262 390 GTERLLIYEF 399 (399)
Q Consensus 390 ~~~~~lv~Ey 399 (399)
....++++||
T Consensus 90 ~~~~~lv~e~ 99 (314)
T cd05099 90 EGPLYVIVEY 99 (314)
T ss_pred CCceEEEEec
Confidence 8889999997
No 255
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.48 E-value=4.5e-07 Score=83.90 Aligned_cols=77 Identities=31% Similarity=0.566 Sum_probs=63.0
Q ss_pred CCCcccCcccccCceEEEEEEEcC-Cc----EEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
..|...+.||+|+||.||+|..+. +. .+++|.+.... .....++.+|+.++..++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 345667899999999999998743 32 58999886653 3445679999999999999999999999876 77889
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+||
T Consensus 86 v~e~ 89 (279)
T cd05057 86 ITQL 89 (279)
T ss_pred EEec
Confidence 9986
No 256
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.48 E-value=5.7e-07 Score=84.85 Aligned_cols=77 Identities=27% Similarity=0.332 Sum_probs=66.3
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+|...+.||+|+||.||++.... +..+|+|.+..... ...+.+..|++++..++|+||+++++.+...+..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 46677899999999999998764 88999999976432 244578999999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (316)
T cd05574 82 Y 82 (316)
T ss_pred e
Confidence 6
No 257
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.48 E-value=4.7e-07 Score=83.82 Aligned_cols=75 Identities=25% Similarity=0.478 Sum_probs=63.9
Q ss_pred cccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~Ey 399 (399)
...++||+|+||.||++...+ +..+++|.+.... ......+.+|++++..++|+|++++++++... +..++|+||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY 81 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence 456789999999999999764 7899999997652 33345788999999999999999999999877 789999997
No 258
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.48 E-value=6e-07 Score=82.86 Aligned_cols=76 Identities=25% Similarity=0.534 Sum_probs=64.4
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeEEEEEe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQ---HRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~E 398 (399)
|+..++||+|+||.||+|... ++..+++|.+... ......++.+|+.+++.++ |+|++++.+++..+...+||||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 556789999999999999974 5889999998654 3344567889999999886 9999999999998899999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 83 ~ 83 (277)
T cd06917 83 Y 83 (277)
T ss_pred c
Confidence 7
No 259
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.48 E-value=4.6e-07 Score=85.84 Aligned_cols=72 Identities=28% Similarity=0.327 Sum_probs=59.7
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++..+. ++.||+|.+.+. .....+.+..|..++..+ +||||+++++++...+..+|||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey 77 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEF 77 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcC
Confidence 468999999999999754 789999998653 223345678888888776 799999999999999999999997
No 260
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.48 E-value=5.5e-07 Score=85.20 Aligned_cols=72 Identities=24% Similarity=0.267 Sum_probs=57.5
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++.... ++.||+|.++.. .....+.+..|..++.. .+||||+++++.+..++..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~ 77 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEY 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence 468999999999999854 778999998753 12233456667776664 5899999999999889999999997
No 261
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.47 E-value=9.1e-07 Score=81.26 Aligned_cols=77 Identities=27% Similarity=0.444 Sum_probs=62.6
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-----VQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERL 394 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 394 (399)
+|...++||+|+||.||++... .+..+++|.+.... .+....+.+|+.++..++|+||+++.+++.. ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 5777899999999999999875 47899999886431 2234568899999999999999999998865 35678
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+++||
T Consensus 83 l~~e~ 87 (266)
T cd06651 83 IFMEY 87 (266)
T ss_pred EEEeC
Confidence 89986
No 262
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.47 E-value=3.4e-07 Score=84.26 Aligned_cols=77 Identities=23% Similarity=0.449 Sum_probs=62.5
Q ss_pred CCCcccCcccccCceEEEEEEEcCC----cEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g----~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
+++...++||+|+||.||+|...+. ..|++|...... ....+.+.+|+.++.+++|+||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 3466779999999999999986432 468999886553 4455689999999999999999999998754 557899
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 85 ~e~ 87 (270)
T cd05056 85 MEL 87 (270)
T ss_pred EEc
Confidence 986
No 263
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.47 E-value=5.2e-07 Score=83.77 Aligned_cols=77 Identities=31% Similarity=0.459 Sum_probs=63.3
Q ss_pred CCcccCcccccCceEEEEEEEc-----CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-----HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERL 394 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-----~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 394 (399)
.|+..++||+|+||.||.+.+. .+..|++|.++.. .......+.+|+.+++.++|+||+++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 3566789999999999999752 3678999998754 234456799999999999999999999998764 5688
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+||||
T Consensus 85 lv~e~ 89 (284)
T cd05079 85 LIMEF 89 (284)
T ss_pred EEEEc
Confidence 99997
No 264
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.47 E-value=7.8e-07 Score=82.50 Aligned_cols=76 Identities=30% Similarity=0.430 Sum_probs=61.0
Q ss_pred CcccCcccccCceEEEEEEE-----cCCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRL-----SHGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLL 395 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~-----~~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 395 (399)
+...+.||+|+||.||.+.+ .++..||+|.+.... ......|.+|++++.+++||||+++.+++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 35678999999999988654 246789999987542 23456789999999999999999999988653 35789
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
+|||
T Consensus 86 v~e~ 89 (283)
T cd05080 86 IMEY 89 (283)
T ss_pred EecC
Confidence 9987
No 265
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.46 E-value=6.7e-07 Score=83.19 Aligned_cols=77 Identities=29% Similarity=0.470 Sum_probs=58.1
Q ss_pred CCcccCcccccCceEEEEEEEc--CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcC---CCCCccceeEEEEe-----C
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS--HGQEIAVKRLSKNS--VQGELEFKNEVLLVARL---QHRNLVRLLGFSFE-----G 390 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~--~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~ 390 (399)
.|...+.||+|+||.||++... ++..||+|.++... ......+.+|+.++..+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 4666789999999999999863 36789999986532 22234567777776655 79999999998853 3
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
...++|+||
T Consensus 82 ~~~~lv~e~ 90 (290)
T cd07862 82 TKLTLVFEH 90 (290)
T ss_pred CcEEEEEcc
Confidence 458899986
No 266
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.46 E-value=4e-07 Score=86.79 Aligned_cols=78 Identities=22% Similarity=0.396 Sum_probs=64.1
Q ss_pred CCCcccCcccccCceEEEEEEEcC--------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT 391 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 391 (399)
..|...+.||+|+||.||++.... ...||+|.++.. .....+++.+|+.++.++ +|+||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 346778999999999999997421 236899988754 334456899999999999 8999999999999888
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
..++++||
T Consensus 92 ~~~lv~e~ 99 (334)
T cd05100 92 PLYVLVEY 99 (334)
T ss_pred ceEEEEec
Confidence 89999997
No 267
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.46 E-value=5.2e-07 Score=84.09 Aligned_cols=77 Identities=26% Similarity=0.406 Sum_probs=62.7
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCe-----E
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTE-----R 393 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~-----~ 393 (399)
+|+..+.||+|+||.||++... +++.||+|.++... ......+.+|+.++..++ |+||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 5677889999999999999975 47899999876542 223357889999999995 6999999999876655 8
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++||||
T Consensus 82 ~lv~e~ 87 (295)
T cd07837 82 YLVFEY 87 (295)
T ss_pred EEEeec
Confidence 999997
No 268
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.46 E-value=1.1e-06 Score=79.78 Aligned_cols=76 Identities=28% Similarity=0.516 Sum_probs=65.8
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|+..++||+|.+|.||++... .+..+++|.+..... .....+.+|++++.+++|+|++++++++...+..++++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 556789999999999999875 478899999976543 4456799999999999999999999999988999999986
No 269
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.45 E-value=5.9e-07 Score=84.50 Aligned_cols=79 Identities=25% Similarity=0.477 Sum_probs=64.0
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLL 395 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 395 (399)
.++|...+.||+|.||.||++... .|+.||+|.++.... .....+.+|+.++.+++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 356778899999999999999975 488999999864321 2223567899999999999999999998654 56899
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+||
T Consensus 86 v~e~ 89 (309)
T cd07845 86 VMEY 89 (309)
T ss_pred EEec
Confidence 9997
No 270
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.45 E-value=5.9e-07 Score=86.70 Aligned_cols=79 Identities=19% Similarity=0.333 Sum_probs=64.2
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------T 391 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 391 (399)
.++|...++||+|+||.||++... .++.||||.+... .......+.+|+.++..++|+||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 456788899999999999999864 4788999998653 233345788999999999999999999987543 3
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
..++||||
T Consensus 103 ~~~lv~e~ 110 (364)
T cd07875 103 DVYIVMEL 110 (364)
T ss_pred eEEEEEeC
Confidence 47999997
No 271
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.45 E-value=4.9e-07 Score=89.77 Aligned_cols=72 Identities=24% Similarity=0.267 Sum_probs=61.7
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..|.....||+|+||.||++.... ++.||||.... ..+.+|+.+|.+++|+|||++++++..+...+|||||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 357778999999999999999865 78899996422 2467899999999999999999999999999999985
No 272
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.45 E-value=6.7e-07 Score=84.42 Aligned_cols=71 Identities=23% Similarity=0.480 Sum_probs=57.8
Q ss_pred cCcccccCceEEEEEEEc---CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEEEeC
Q 044262 327 DNKLGQGGFGAVYKGRLS---HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLIYEF 399 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~---~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey 399 (399)
..+||+|+||.||++... .+..+|+|.+.... ....+.+|+.+|.+++||||+++++++.. ....++++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999864 35789999986542 23457899999999999999999998854 3557899986
No 273
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.45 E-value=6.3e-07 Score=88.84 Aligned_cols=76 Identities=22% Similarity=0.459 Sum_probs=60.2
Q ss_pred hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--------
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-------- 390 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-------- 390 (399)
....|...++||+|+||.||+|... .++.||||.+.... ....+|+.+|..++|+|||++.+++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3456888899999999999999875 47899999885432 1345799999999999999998876432
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
..+++||||
T Consensus 140 ~~l~lvmE~ 148 (440)
T PTZ00036 140 IFLNVVMEF 148 (440)
T ss_pred eEEEEEEec
Confidence 236789997
No 274
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.45 E-value=6.7e-07 Score=84.87 Aligned_cols=76 Identities=21% Similarity=0.152 Sum_probs=62.0
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCC-CccceeEEEEeCCeEEEEEe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHR-NLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~E 398 (399)
|...+.||+|+||.||++...+ ++.||+|.+... .....+.+..|.+++..++|+ +|+++.+++...+..++|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 5667899999999999998754 678999998753 223345688899999998765 58888888888889999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (324)
T cd05587 82 Y 82 (324)
T ss_pred C
Confidence 7
No 275
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.44 E-value=7.1e-07 Score=84.02 Aligned_cols=76 Identities=29% Similarity=0.489 Sum_probs=64.3
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||+|... ++..+++|.+... ......++.+|+.+++.++|+|++++.+++...+..++|+||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 555688999999999999975 4778999998642 223345788999999999999999999999999999999997
No 276
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.44 E-value=7.4e-07 Score=81.12 Aligned_cols=72 Identities=40% Similarity=0.696 Sum_probs=62.4
Q ss_pred CcccccCceEEEEEEEcC----CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++.... +..+++|.+...... ..+.+.+|++.+..++|+||+++++++......++|+||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEe
Confidence 478999999999999854 678999999765332 356899999999999999999999999988899999997
No 277
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.44 E-value=1e-06 Score=79.88 Aligned_cols=76 Identities=26% Similarity=0.447 Sum_probs=65.5
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeEEEEEe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TERLLIYE 398 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E 398 (399)
|...+.||+|++|.||++... ++..|++|.+..... ...+.+.+|+..+++++|+||+++++.+... ...++++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 556789999999999999986 588999999876542 4456799999999999999999999999887 78999998
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (260)
T cd06606 82 Y 82 (260)
T ss_pred e
Confidence 6
No 278
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.44 E-value=7.7e-07 Score=81.95 Aligned_cols=72 Identities=31% Similarity=0.568 Sum_probs=60.1
Q ss_pred CcccccCceEEEEEEEcC-Cc--EEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQ--EIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~--~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++...+ +. .+++|.+... .....+.+.+|+.++.++ +||||+++++++...+..+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEe
Confidence 468999999999999854 33 4788888653 334456799999999999 899999999999988889999996
No 279
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.44 E-value=4.8e-07 Score=82.78 Aligned_cols=76 Identities=29% Similarity=0.460 Sum_probs=62.9
Q ss_pred CCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.+...++||+|+||.||++....+..+++|.+.... ...+.|.+|+.++..++|+|++++.+++. .+..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 4466778999999999999998777789999886543 23457899999999999999999998874 5567899987
No 280
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.44 E-value=2.5e-07 Score=85.74 Aligned_cols=76 Identities=25% Similarity=0.479 Sum_probs=64.0
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|.||.||++... .|..+++|.++... ......+.+|+.++.+++|+||+++++++......++++||
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 556688999999999999975 48899999986532 22234678899999999999999999999988999999997
No 281
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.43 E-value=9.1e-07 Score=84.12 Aligned_cols=72 Identities=21% Similarity=0.213 Sum_probs=60.4
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++.... ++.+|+|.++... ....+.+.+|+.++.++ +|+||+++.+++...+..+|||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 77 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEY 77 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 469999999999998754 6889999997542 23345688999998887 699999999999999999999997
No 282
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.43 E-value=7.8e-08 Score=90.46 Aligned_cols=77 Identities=21% Similarity=0.406 Sum_probs=66.9
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.|...+.||+|.||.||||.-.. ++.||+|.+... .....++...|+.++.+++|+||.+.+|.+..+..+|++|||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 45667899999999999999744 788999999754 444567899999999999999999999999999999999987
No 283
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.43 E-value=3.1e-07 Score=94.36 Aligned_cols=84 Identities=30% Similarity=0.406 Sum_probs=70.5
Q ss_pred hHHhhcCCCcccCcccccCceEEEEEEEcC--------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeE
Q 044262 316 TIRDATNNFSTDNKLGQGGFGAVYKGRLSH--------GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLG 385 (399)
Q Consensus 316 ~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~--------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g 385 (399)
.++...+++...+.||+|.||.|++|.+.. ...||||.++.. .....+.+..|+++|..+ +|+||+.|+|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 466667777777899999999999998631 347999999865 334567899999999998 6999999999
Q ss_pred EEEeCCeEEEEEeC
Q 044262 386 FSFEGTERLLIYEF 399 (399)
Q Consensus 386 ~~~~~~~~~lv~Ey 399 (399)
+|....+.++|.||
T Consensus 370 ~~t~~~~~~~v~Ey 383 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEY 383 (609)
T ss_pred eeccCCceEEEEEe
Confidence 99998999999997
No 284
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.43 E-value=6.8e-07 Score=83.56 Aligned_cols=79 Identities=20% Similarity=0.404 Sum_probs=65.2
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 397 (399)
.++|...++||+|.||.||++..+. +..+|||.++... .....++..|+.++.+.+ |+||+++++++......+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3556778999999999999999865 8899999997542 233456778888777765 999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 94 e~ 95 (296)
T cd06618 94 EL 95 (296)
T ss_pred ec
Confidence 97
No 285
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.43 E-value=3.1e-07 Score=93.27 Aligned_cols=79 Identities=27% Similarity=0.450 Sum_probs=66.3
Q ss_pred cCCCcccCcccccCceEEEEEEEcCC-cEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEE-EEe------CC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSHG-QEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGF-SFE------GT 391 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~g-~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~-~~~------~~ 391 (399)
.-++.+.++|.+|+|+.||.+....+ ..+|+|++-..++...+...+||.+|++|. |+|||.+++. ... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 33456679999999999999998765 999999998878888889999999999997 9999999993 222 24
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
+.+|.|||
T Consensus 116 EvllLmEy 123 (738)
T KOG1989|consen 116 EVLLLMEY 123 (738)
T ss_pred EEEeehhh
Confidence 67899997
No 286
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.43 E-value=5.7e-07 Score=86.49 Aligned_cols=80 Identities=20% Similarity=0.341 Sum_probs=64.4
Q ss_pred hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------ 390 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------ 390 (399)
..++|...+.||+|+||.||++... .++.||||.+... .......+.+|+.++..++|+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3456888899999999999999864 4788999998653 233345788999999999999999999987643
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
...++||||
T Consensus 95 ~~~~lv~e~ 103 (355)
T cd07874 95 QDVYLVMEL 103 (355)
T ss_pred ceeEEEhhh
Confidence 346899986
No 287
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.43 E-value=9.2e-07 Score=81.25 Aligned_cols=80 Identities=29% Similarity=0.451 Sum_probs=66.6
Q ss_pred hhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC-----
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT----- 391 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~----- 391 (399)
.++++|...+.||+|+||.||++..+ .++.+++|.+..... ....+.+|+.++.++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 45677888999999999999999985 467899999876543 345799999999998 7999999999987644
Q ss_pred -eEEEEEeC
Q 044262 392 -ERLLIYEF 399 (399)
Q Consensus 392 -~~~lv~Ey 399 (399)
..++||||
T Consensus 82 ~~~~lv~e~ 90 (275)
T cd06608 82 DQLWLVMEL 90 (275)
T ss_pred eEEEEEEEc
Confidence 48999997
No 288
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.43 E-value=7.5e-07 Score=82.96 Aligned_cols=86 Identities=27% Similarity=0.444 Sum_probs=69.7
Q ss_pred ChhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 044262 313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG 390 (399)
Q Consensus 313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 390 (399)
...++..+.++|...+.||+|.||.||++... +++.+|+|.+..... ....+.+|+.++.++ +|+|++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 44566677888999999999999999999874 478899999865432 234678899999988 899999999998754
Q ss_pred -----CeEEEEEeC
Q 044262 391 -----TERLLIYEF 399 (399)
Q Consensus 391 -----~~~~lv~Ey 399 (399)
...++|+||
T Consensus 92 ~~~~~~~~~lv~ey 105 (291)
T cd06639 92 DKLVGGQLWLVLEL 105 (291)
T ss_pred cccCCCeeEEEEEE
Confidence 357999997
No 289
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.42 E-value=1.3e-06 Score=78.79 Aligned_cols=76 Identities=33% Similarity=0.611 Sum_probs=66.8
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|++|.||++... ++..+++|++..........+.+|+..+.+++|+|++++++.+......++++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 455688999999999999986 5788999999776544567899999999999999999999999988999999997
No 290
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=4.4e-07 Score=89.96 Aligned_cols=80 Identities=23% Similarity=0.290 Sum_probs=67.7
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 394 (399)
..++|....+||+|.||+|+.++++. ++..|||.|++. .....+..+.|-.++.-. +||-|++|++++-..+.++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 34578888999999999999999865 778999999876 344556778888776655 6999999999999999999
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
.||||
T Consensus 446 fvmey 450 (694)
T KOG0694|consen 446 FVMEY 450 (694)
T ss_pred EEEEe
Confidence 99998
No 291
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.42 E-value=7.2e-07 Score=83.67 Aligned_cols=78 Identities=27% Similarity=0.451 Sum_probs=62.7
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-------
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------- 391 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------- 391 (399)
++|...++||+|+||.||++... ++..||+|.+.... ......+.+|+.++.+++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 45777899999999999999875 47899999986432 222345678999999999999999999987643
Q ss_pred -eEEEEEeC
Q 044262 392 -ERLLIYEF 399 (399)
Q Consensus 392 -~~~lv~Ey 399 (399)
..++||||
T Consensus 92 ~~~~lv~e~ 100 (310)
T cd07865 92 GSFYLVFEF 100 (310)
T ss_pred ceEEEEEcC
Confidence 34899987
No 292
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.42 E-value=8.5e-07 Score=84.89 Aligned_cols=82 Identities=21% Similarity=0.357 Sum_probs=65.1
Q ss_pred HhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC---
Q 044262 318 RDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT--- 391 (399)
Q Consensus 318 ~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--- 391 (399)
....++|...+.||+|+||.||++... ++..||||.+... .......+.+|+.+|.+++|+||+++++++....
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 334567888899999999999999864 5889999998543 2233456889999999999999999999886543
Q ss_pred ---eEEEEEeC
Q 044262 392 ---ERLLIYEF 399 (399)
Q Consensus 392 ---~~~lv~Ey 399 (399)
..++|+||
T Consensus 91 ~~~~~~lv~e~ 101 (343)
T cd07880 91 RFHDFYLVMPF 101 (343)
T ss_pred ccceEEEEEec
Confidence 35889886
No 293
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.42 E-value=1.2e-06 Score=81.44 Aligned_cols=76 Identities=28% Similarity=0.411 Sum_probs=65.4
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+...++||+|++|.||++... +++.+++|.+........+.+.+|+.++..++|+||+++++++..++..++++||
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 444579999999999999864 5788999998765545556789999999999999999999999989999999997
No 294
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.42 E-value=9.2e-07 Score=83.88 Aligned_cols=76 Identities=21% Similarity=0.152 Sum_probs=61.4
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E 398 (399)
|...++||+|+||.||++.... +..+|+|.+.+.. ....+.+..|..++..+ +|++|+++.+++...+..+||||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 5667899999999999998754 6789999987532 22334577788887776 58999999999988899999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (323)
T cd05616 82 Y 82 (323)
T ss_pred C
Confidence 7
No 295
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.42 E-value=8.1e-07 Score=83.75 Aligned_cols=71 Identities=24% Similarity=0.478 Sum_probs=57.9
Q ss_pred cCcccccCceEEEEEEEcC---CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEEEeC
Q 044262 327 DNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLIYEF 399 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~Ey 399 (399)
..+||+|+||.||++...+ +..+|+|.+.... ....+.+|+.++.+++||||+++.+++.. ....++|+||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 4689999999999998753 4689999986542 23468899999999999999999998854 4567899986
No 296
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.42 E-value=1e-06 Score=83.83 Aligned_cols=76 Identities=25% Similarity=0.280 Sum_probs=62.5
Q ss_pred CcccCcccccCceEEEEEEE----cCCcEEEEEEecCC----ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKN----SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~----~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 394 (399)
|...++||+|+||.||++.. ..+..+|+|.+.+. .....+.+..|+.++..+ +|+||+++.+++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 56678999999999998875 24788999998643 122345688899999999 5999999999998889999
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
|||||
T Consensus 82 lv~e~ 86 (332)
T cd05614 82 LILDY 86 (332)
T ss_pred EEEeC
Confidence 99997
No 297
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.42 E-value=1.4e-06 Score=79.99 Aligned_cols=78 Identities=26% Similarity=0.434 Sum_probs=63.2
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--TER 393 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 393 (399)
.+|...+.||+|+||.||++... ++..+++|.+... .......+.+|++++.+++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 45777899999999999999864 4889999987532 223345789999999999999999999988654 457
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 82 ~~v~e~ 87 (264)
T cd06653 82 SIFVEY 87 (264)
T ss_pred EEEEEe
Confidence 889886
No 298
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.41 E-value=9.4e-08 Score=99.94 Aligned_cols=73 Identities=38% Similarity=0.493 Sum_probs=60.2
Q ss_pred hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE 392 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 392 (399)
...+|+..+.||+|+||.|||...+ +|+.+|||+|... +.+......+|++++++|+|||||+++..+.+...
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 3456888899999999999999865 6999999999765 33334568899999999999999999988766543
No 299
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.41 E-value=3.8e-07 Score=83.76 Aligned_cols=72 Identities=38% Similarity=0.616 Sum_probs=60.2
Q ss_pred CcccccCceEEEEEEEcC-------CcEEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-------GQEIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-------g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++...+ +..+++|.+.... ......|.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998743 2578999886542 23456799999999999999999999999888889999997
No 300
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.41 E-value=9e-07 Score=83.72 Aligned_cols=72 Identities=26% Similarity=0.286 Sum_probs=58.7
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||++... .+..||+|.++... ......+..|..++.. ++|+||+++++.+...+..+|||||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~ 77 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEF 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECC
Confidence 46999999999999986 47899999997531 1233456778877765 4899999999999999999999997
No 301
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.41 E-value=8.2e-07 Score=84.58 Aligned_cols=74 Identities=22% Similarity=0.406 Sum_probs=61.5
Q ss_pred ccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhh--------------HHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262 326 TDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQG--------------ELEFKNEVLLVARLQHRNLVRLLGFSFEG 390 (399)
Q Consensus 326 ~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 390 (399)
..+.||+|+||.||++... .++.||+|.+....... ...+.+|++++..++|+||+++++++...
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3578999999999999865 48899999986532111 12478999999999999999999999999
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
+..++||||
T Consensus 93 ~~~~lv~e~ 101 (335)
T PTZ00024 93 DFINLVMDI 101 (335)
T ss_pred CcEEEEEec
Confidence 999999997
No 302
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.41 E-value=1e-06 Score=80.53 Aligned_cols=72 Identities=28% Similarity=0.532 Sum_probs=57.8
Q ss_pred CcccccCceEEEEEEEcC----CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH----GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey 399 (399)
+.||+|+||.||+|...+ ...+|+|.+... .....+.+..|+.+++.++||||+++++++.. ++..++++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 468999999999998632 357999998643 33445688999999999999999999998764 4457889986
No 303
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.40 E-value=5.1e-07 Score=81.13 Aligned_cols=78 Identities=28% Similarity=0.409 Sum_probs=66.9
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|.....||.|+||.|.....+. |...|+|.|.+.. .+..+...+|..+|..+.||.+++|.+.+...+.++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 346667899999999999988754 7789999997753 234556889999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 124 ey 125 (355)
T KOG0616|consen 124 EY 125 (355)
T ss_pred ec
Confidence 97
No 304
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.40 E-value=1.2e-06 Score=80.98 Aligned_cols=70 Identities=29% Similarity=0.396 Sum_probs=59.1
Q ss_pred ccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|+||.||++... +++.+++|.+.... ......+..|++++..++||||+++.+.+...+..+||+||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEec
Confidence 689999999999865 47899999986532 22244578899999999999999999999888999999997
No 305
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.38 E-value=7.3e-07 Score=85.86 Aligned_cols=73 Identities=15% Similarity=0.233 Sum_probs=61.9
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+|...+.||+|+||.||++.... +..||+|..... ....|+.++.+++|+||+++++++..++..++|+||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 3468888999999999999999854 678999975432 245689999999999999999999999999999986
No 306
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.38 E-value=1.2e-06 Score=80.62 Aligned_cols=75 Identities=31% Similarity=0.499 Sum_probs=58.5
Q ss_pred cccCcccccCceEEEEEEEc----CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------e
Q 044262 325 STDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------E 392 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~ 392 (399)
...++||+|+||.||++.+. .+..||+|.+... .....+++.+|+.+++.++||||+++++++...+ .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45688999999999999864 2578999998654 3344567899999999999999999999876532 2
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++++||
T Consensus 82 ~~~~~~~ 88 (273)
T cd05074 82 PMVILPF 88 (273)
T ss_pred eEEEEec
Confidence 3566664
No 307
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.38 E-value=7.2e-07 Score=85.31 Aligned_cols=80 Identities=23% Similarity=0.358 Sum_probs=63.0
Q ss_pred hcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------ 390 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------ 390 (399)
..+.|...+.||+|+||.||++... .+..||||.+.... ....+.+.+|+.++..++|+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3466888899999999999999864 47889999986532 22345688999999999999999999877532
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
...++++|+
T Consensus 93 ~~~~~~~~~ 101 (343)
T cd07878 93 NEVYLVTNL 101 (343)
T ss_pred CcEEEEeec
Confidence 346788775
No 308
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.37 E-value=9.6e-07 Score=84.47 Aligned_cols=78 Identities=23% Similarity=0.416 Sum_probs=63.2
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------Ce
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TE 392 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~ 392 (399)
.+|...+.||+|+||.||+|... .++.||+|.+... .......+.+|+.++..++|+||+++++++... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 56777899999999999999864 5889999998653 222335688999999999999999999988653 24
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++|+||
T Consensus 95 ~~lv~e~ 101 (342)
T cd07879 95 FYLVMPY 101 (342)
T ss_pred EEEEecc
Confidence 6888886
No 309
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.37 E-value=1.6e-06 Score=82.28 Aligned_cols=72 Identities=25% Similarity=0.302 Sum_probs=57.0
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVL-LVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++.... ++.+|+|.+.... ......+..|.. ++..++|+||+++++.+...+..++||||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~ 77 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDY 77 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeC
Confidence 468999999999998754 6789999986532 122234555554 56789999999999999999999999997
No 310
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.37 E-value=8.9e-07 Score=84.44 Aligned_cols=79 Identities=18% Similarity=0.339 Sum_probs=63.8
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CeE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TER 393 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 393 (399)
.++|...++||+|+||.||++... +++.||+|.+... .......+..|+.++.+++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 356788899999999999999864 5889999998643 223345688999999999999999999887654 347
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 84 ~lv~e~ 89 (336)
T cd07849 84 YIVQEL 89 (336)
T ss_pred EEEehh
Confidence 899886
No 311
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.37 E-value=1.2e-06 Score=83.04 Aligned_cols=76 Identities=21% Similarity=0.162 Sum_probs=61.0
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E 398 (399)
|...+.||+|+||.||++... +++.||+|.+... .....+.+..|..++..+. |++|+++.+++...+..+||||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 456689999999999999875 4789999998753 2223456788888888875 5678889888888889999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 y 82 (323)
T cd05615 82 Y 82 (323)
T ss_pred C
Confidence 7
No 312
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.36 E-value=1.4e-06 Score=80.47 Aligned_cols=75 Identities=27% Similarity=0.443 Sum_probs=60.4
Q ss_pred cccCcccccCceEEEEEEEc-CCcEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeC--CeEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEG--TERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~Ey 399 (399)
...++||+|.||.||++... ++..+|+|.++... ........+|+..+.++. |+|++++++++... +..++|+||
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 44678999999999999875 47889999986542 222234568898899885 99999999999877 789999997
No 313
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.36 E-value=1.9e-06 Score=78.65 Aligned_cols=76 Identities=22% Similarity=0.429 Sum_probs=61.9
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeEEEEEe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE--GTERLLIYE 398 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E 398 (399)
|...+.||+|+||.||++... ++..+++|.+... .....+.+..|+.++.+++|+||+++++.+.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 556788999999999999864 4788999998643 33445678999999999999999999997764 345789998
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 82 ~ 82 (265)
T cd08217 82 Y 82 (265)
T ss_pred h
Confidence 6
No 314
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.36 E-value=1.5e-06 Score=83.25 Aligned_cols=85 Identities=24% Similarity=0.396 Sum_probs=67.2
Q ss_pred hhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-
Q 044262 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG- 390 (399)
Q Consensus 315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~- 390 (399)
.++...+++|...+.||+|+||.||++... ++..||+|++... .....+.+.+|+.++.+++|+||+++.+++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 456667788999999999999999999864 5889999998753 223345688999999999999999999987543
Q ss_pred -----CeEEEEEeC
Q 044262 391 -----TERLLIYEF 399 (399)
Q Consensus 391 -----~~~~lv~Ey 399 (399)
...++++|+
T Consensus 90 ~~~~~~~~~lv~~~ 103 (345)
T cd07877 90 SLEEFNDVYLVTHL 103 (345)
T ss_pred cccccccEEEEehh
Confidence 235677664
No 315
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.36 E-value=1.2e-06 Score=81.06 Aligned_cols=86 Identities=33% Similarity=0.545 Sum_probs=68.8
Q ss_pred ChhhHHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe-
Q 044262 313 DFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE- 389 (399)
Q Consensus 313 ~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~- 389 (399)
++.++..+.+.|+..++||+|+||.||++... .++.+|+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 34555566778888899999999999999974 47889999886543 3345688999999988 79999999999853
Q ss_pred -----CCeEEEEEeC
Q 044262 390 -----GTERLLIYEF 399 (399)
Q Consensus 390 -----~~~~~lv~Ey 399 (399)
.+..+++|||
T Consensus 86 ~~~~~~~~~~iv~e~ 100 (282)
T cd06636 86 SPPGHDDQLWLVMEF 100 (282)
T ss_pred cccCCCCEEEEEEEe
Confidence 3568999997
No 316
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.36 E-value=9.4e-07 Score=84.27 Aligned_cols=79 Identities=23% Similarity=0.447 Sum_probs=63.8
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC--CeEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG--TERL 394 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~ 394 (399)
.++|...+.||+|+||.||+|... .+..+++|++... .......+.+|+.++.++ +|+||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 345777899999999999999875 4788999988542 223345678899999999 999999999988653 3689
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
||+||
T Consensus 86 lv~e~ 90 (337)
T cd07852 86 LVFEY 90 (337)
T ss_pred EEecc
Confidence 99997
No 317
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.36 E-value=1.2e-06 Score=85.58 Aligned_cols=73 Identities=14% Similarity=0.179 Sum_probs=61.7
Q ss_pred CCCcccCcccccCceEEEEEEEcC---CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
..|...++||+|+||.||++...+ +..|++|.+... ..+.+|+.+|.+++|+|||++++++......+++||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 457788999999999999997633 467999988543 245689999999999999999999988889999998
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 167 ~ 167 (392)
T PHA03207 167 K 167 (392)
T ss_pred h
Confidence 5
No 318
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.35 E-value=2.2e-06 Score=77.82 Aligned_cols=76 Identities=22% Similarity=0.403 Sum_probs=65.6
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||++... ++..+++|.+.... ......+.+|++++..++|+|++++.+.+..++..+||+||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 556788999999999999985 47899999987643 24556799999999999999999999999888999999986
No 319
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.35 E-value=1.9e-06 Score=78.69 Aligned_cols=71 Identities=38% Similarity=0.641 Sum_probs=58.1
Q ss_pred CcccccCceEEEEEEEcC----CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|+||.||+|.+.. +..+++|.+..... ...+++.+|+.++..+.|+|||++++++. .+..++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEe
Confidence 479999999999998633 26899999876533 34567999999999999999999999874 5567899986
No 320
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.35 E-value=7.9e-07 Score=88.72 Aligned_cols=80 Identities=20% Similarity=0.455 Sum_probs=57.7
Q ss_pred hcCCCcccCcccccCceEEEEEEE-----------------cCCcEEEEEEecCCChhhHHH--------------HHHH
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRL-----------------SHGQEIAVKRLSKNSVQGELE--------------FKNE 368 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~-----------------~~g~~vavK~l~~~~~~~~~~--------------f~~E 368 (399)
..++|...++||+|+||.||+|.. ..++.||||++........++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467889999999999999999964 134679999986543322233 4456
Q ss_pred HHHHhcCCCCCc-----cceeEEEEe--------CCeEEEEEeC
Q 044262 369 VLLVARLQHRNL-----VRLLGFSFE--------GTERLLIYEF 399 (399)
Q Consensus 369 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~Ey 399 (399)
+.++.+++|.++ ++++|++.. ....+|||||
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey 266 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKF 266 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEc
Confidence 777777777654 677887753 3568999997
No 321
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.34 E-value=6e-07 Score=82.70 Aligned_cols=78 Identities=21% Similarity=0.397 Sum_probs=63.0
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-----CCeE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-----GTER 393 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-----~~~~ 393 (399)
..+...+.||+|+||.|.++..+ .|+.||||++... ..-..+.-.+|+++|+.++|+||+.++..... -+..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 34444688999999999999875 4899999999732 44445678999999999999999999988765 2558
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++|+|+
T Consensus 102 YiV~el 107 (359)
T KOG0660|consen 102 YLVFEL 107 (359)
T ss_pred EEehhH
Confidence 999885
No 322
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.34 E-value=2e-06 Score=78.71 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=60.6
Q ss_pred ccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||.|+||.||++.... ++.+++|.+.... ....+.+.+|+.++..++|+||+++++.+..+...++++||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEec
Confidence 6999999999999854 7899999986542 23345799999999999999999999999988999999997
No 323
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.34 E-value=2.1e-06 Score=81.61 Aligned_cols=72 Identities=22% Similarity=0.329 Sum_probs=60.3
Q ss_pred Cccccc--CceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQG--GFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G--~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.+||+| +||.||++... .++.||+|.+... .....+.+.+|+.++..++||||+++++++..++..++|+||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~ 80 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPF 80 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEec
Confidence 456776 89999999874 5899999998653 333446788999999999999999999999999999999987
No 324
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.34 E-value=9.5e-07 Score=84.52 Aligned_cols=78 Identities=22% Similarity=0.328 Sum_probs=64.5
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC----------
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG---------- 390 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~---------- 390 (399)
.+|...+.||+|+||.||++... .+..|++|.+........+.+.+|++++.+++|+||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 45777899999999999999875 4789999998766555566789999999999999999998766543
Q ss_pred ----CeEEEEEeC
Q 044262 391 ----TERLLIYEF 399 (399)
Q Consensus 391 ----~~~~lv~Ey 399 (399)
...++|+||
T Consensus 85 ~~~~~~~~lv~e~ 97 (342)
T cd07854 85 LTELNSVYIVQEY 97 (342)
T ss_pred ccccceEEEEeec
Confidence 347899987
No 325
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.33 E-value=7.7e-07 Score=82.07 Aligned_cols=77 Identities=22% Similarity=0.336 Sum_probs=65.3
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ 397 (399)
+|...+.||+|+||.||++... ++..+++|.+... .......+.+|..++.+++ |+||+++++.+...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 4667789999999999999975 5889999998653 2233457889999999998 999999999998888999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 e~ 83 (280)
T cd05581 82 EY 83 (280)
T ss_pred cC
Confidence 96
No 326
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.33 E-value=8e-07 Score=82.27 Aligned_cols=76 Identities=30% Similarity=0.486 Sum_probs=62.5
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh-hhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV-QGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||+|+||.||+|...+ ++.|++|.+..... .......+|+..+.+++ |+||+++++.+..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 3456889999999999999864 78899999865422 22234567999999999 99999999999999999999997
No 327
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.32 E-value=1.4e-06 Score=87.55 Aligned_cols=83 Identities=17% Similarity=0.213 Sum_probs=65.8
Q ss_pred HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC--
Q 044262 317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-- 391 (399)
Q Consensus 317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-- 391 (399)
.....++|...++||+|+||.||++... +++.||||.+... .......+.+|+..+..++|+||+++...+...+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 3444567888999999999999999864 5889999998654 3444567899999999999999999887664332
Q ss_pred ------eEEEEEeC
Q 044262 392 ------ERLLIYEF 399 (399)
Q Consensus 392 ------~~~lv~Ey 399 (399)
..++||||
T Consensus 107 ~~~~~~~i~lV~Ey 120 (496)
T PTZ00283 107 NPENVLMIALVLDY 120 (496)
T ss_pred CcccceEEEEEEeC
Confidence 26789987
No 328
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.32 E-value=1.2e-06 Score=79.82 Aligned_cols=73 Identities=33% Similarity=0.625 Sum_probs=60.9
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.|...+.||+|+||.||++.. .+..+++|.++... ....+.+|+.++..++|+|++++++.+.. +..+++|||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~ 79 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMEL 79 (254)
T ss_pred HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEEC
Confidence 466779999999999999976 67789999986532 23578999999999999999999998864 457899987
No 329
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.32 E-value=1.3e-06 Score=79.43 Aligned_cols=76 Identities=26% Similarity=0.446 Sum_probs=64.6
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...++||+|.||.||++... ++..+++|.+... ......++.+|+++++.++|+||+++.+.+......++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 566789999999999999764 4788999998653 334455788999999999999999999999888999999986
No 330
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.31 E-value=1.4e-06 Score=79.43 Aligned_cols=70 Identities=19% Similarity=0.283 Sum_probs=60.8
Q ss_pred ccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|+||.||++.... ++.+++|.+..... ...+.+.+|+.++..++|+||+++.+.+..+...++++||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 74 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEY 74 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEec
Confidence 6899999999999865 88999999865432 3455789999999999999999999999888899999997
No 331
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.31 E-value=2.1e-06 Score=78.32 Aligned_cols=74 Identities=30% Similarity=0.537 Sum_probs=61.7
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey 399 (399)
+|...+.||+|+||.||++.. .+..+++|.++... ..+.|.+|+.++..++|+|++++++++.. ++..++++||
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred hCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 566779999999999999987 47789999986432 24579999999999999999999998654 4568999997
No 332
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.31 E-value=2.2e-06 Score=82.30 Aligned_cols=79 Identities=24% Similarity=0.403 Sum_probs=64.2
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------T 391 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 391 (399)
...|...+.||+|+||.||++... .++.||+|.+... .......+.+|+.++..++|+||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 356778899999999999999864 5889999998643 333445788999999999999999999987543 3
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
..+||+||
T Consensus 95 ~~~lv~e~ 102 (353)
T cd07850 95 DVYLVMEL 102 (353)
T ss_pred cEEEEEec
Confidence 46899997
No 333
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.31 E-value=5.1e-08 Score=95.46 Aligned_cols=78 Identities=24% Similarity=0.379 Sum_probs=66.8
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.|.+...||.|+||+|||++.++ +...|.|.|...+....++|+-||++|....||+||+|++.+.-.+.+||+.||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 334455788999999999999765 445678888877778888999999999999999999999988888889999887
No 334
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.31 E-value=2.4e-06 Score=79.49 Aligned_cols=76 Identities=26% Similarity=0.316 Sum_probs=62.8
Q ss_pred CcccCcccccCceEEEEEEE----cCCcEEEEEEecCCC----hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRL----SHGQEIAVKRLSKNS----VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~----~~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 394 (399)
|+..+.||+|+||.||++.. .+|..+|+|.+.... ....+.+.+|+.++..+ +|+||+++.+++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 55678999999999999875 357889999986532 12345688999999999 6999999999988888899
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+|+||
T Consensus 82 lv~e~ 86 (290)
T cd05613 82 LILDY 86 (290)
T ss_pred EEEec
Confidence 99997
No 335
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.30 E-value=2e-06 Score=79.71 Aligned_cols=76 Identities=32% Similarity=0.478 Sum_probs=58.4
Q ss_pred CCcccCcccccCceEEEEEEEc-CCc----EEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv 396 (399)
.|...+.||+|+||.||+|.+. ++. .+++|.+.... .....++..|+..+.+++|+||++++|++. +...+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence 4566789999999999999874 343 47888875442 233457888888999999999999999875 4456778
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 87 ~e~ 89 (279)
T cd05111 87 TQL 89 (279)
T ss_pred EEe
Confidence 876
No 336
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.29 E-value=1.2e-06 Score=82.30 Aligned_cols=79 Identities=25% Similarity=0.478 Sum_probs=62.8
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGT------ 391 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 391 (399)
.++|...++||+|+||.||++... +++.+++|.+..... .....+.+|++++..++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 457788899999999999999975 478899999865322 22346789999999999999999998875433
Q ss_pred --eEEEEEeC
Q 044262 392 --ERLLIYEF 399 (399)
Q Consensus 392 --~~~lv~Ey 399 (399)
..++|+||
T Consensus 87 ~~~~~lv~~~ 96 (311)
T cd07866 87 RGSVYMVTPY 96 (311)
T ss_pred CceEEEEEec
Confidence 36889886
No 337
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.29 E-value=2.1e-06 Score=79.68 Aligned_cols=76 Identities=32% Similarity=0.506 Sum_probs=57.2
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcC---CCCCccceeEEEEe-----CCe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARL---QHRNLVRLLGFSFE-----GTE 392 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~~~ 392 (399)
|...+.||+|+||.||++... +++.||+|.++... ......+.+|+.++..+ +|+||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 556789999999999999875 47899999986532 12223566777766654 79999999998764 244
Q ss_pred EEEEEeC
Q 044262 393 RLLIYEF 399 (399)
Q Consensus 393 ~~lv~Ey 399 (399)
.++++||
T Consensus 82 ~~lv~e~ 88 (288)
T cd07863 82 VTLVFEH 88 (288)
T ss_pred EEEEEcc
Confidence 7899986
No 338
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.29 E-value=2.5e-06 Score=78.90 Aligned_cols=77 Identities=30% Similarity=0.513 Sum_probs=61.0
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCc----EEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQ----EIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~----~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
..|...++||+|+||.||+|.+. ++. .||+|.++.. ......++.+|+.++..++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 34667799999999999999863 343 4899998754 33445679999999999999999999999865 44667
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
++||
T Consensus 86 ~~~~ 89 (279)
T cd05109 86 VTQL 89 (279)
T ss_pred EEEc
Confidence 7775
No 339
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.28 E-value=7e-07 Score=85.74 Aligned_cols=77 Identities=30% Similarity=0.380 Sum_probs=64.1
Q ss_pred CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
-|..++.||+|.|..|-.+.. =.|..||||.+.+.. .-....++.|++.|+-++|||||+|+.+.-.+..+|||+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 355668999999999987653 258999999998763 33445789999999999999999999998888889999984
No 340
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.28 E-value=1.4e-06 Score=83.04 Aligned_cols=78 Identities=13% Similarity=0.305 Sum_probs=63.5
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERL 394 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~ 394 (399)
.+|...++||+|+||.||++... .+..|++|++.... ......+.+|+.+|..++|+||+++.+++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 56777899999999999999875 48899999987542 2334568889999999999999999987653 34588
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+|+||
T Consensus 85 lv~e~ 89 (334)
T cd07855 85 VVMDL 89 (334)
T ss_pred EEEeh
Confidence 99987
No 341
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.28 E-value=2.1e-06 Score=80.64 Aligned_cols=77 Identities=34% Similarity=0.629 Sum_probs=59.5
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCc----EEEEEEecCCC-hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQ----EIAVKRLSKNS-VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~----~vavK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
+.|...+.||+|+||.||++... ++. .+|+|.+.... .....++.+|+.++..++|+||++++|++... ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 34566789999999999999864 343 57899886542 23344789999999999999999999998654 4567
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
++||
T Consensus 86 v~e~ 89 (303)
T cd05110 86 VTQL 89 (303)
T ss_pred eehh
Confidence 7775
No 342
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.27 E-value=1.5e-06 Score=82.60 Aligned_cols=76 Identities=21% Similarity=0.411 Sum_probs=64.4
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCC-----eEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGT-----ERLL 395 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~l 395 (399)
|...+.||+|+||.||++.... +..+++|.+.... ....+.+.+|+..+..++|+||+++.+++...+ ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 5667899999999999999754 8899999987643 334567999999999999999999999987765 6899
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
+|||
T Consensus 82 v~e~ 85 (330)
T cd07834 82 VTEL 85 (330)
T ss_pred Eecc
Confidence 9986
No 343
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.27 E-value=3.7e-06 Score=74.57 Aligned_cols=75 Identities=35% Similarity=0.570 Sum_probs=65.3
Q ss_pred cccCcccccCceEEEEEEEcC-CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
...+.||+|.+|.||++...+ +..+++|.+...... ..+.+.+|++.+.+++|+|++++++.+...+..++++||
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 446789999999999999875 789999999765443 566899999999999999999999999888889999986
No 344
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.26 E-value=2.4e-06 Score=86.87 Aligned_cols=87 Identities=30% Similarity=0.525 Sum_probs=69.0
Q ss_pred cChhhHHhhcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 044262 312 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFE 389 (399)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 389 (399)
..++.+..+++-|.+.++||+|.+|.||++.. ++++.+|+|++.... ...++...|..++..+ +|||++.+.|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 34556667778888999999999999999985 458889999886543 3334566777777765 79999999999864
Q ss_pred -----CCeEEEEEeC
Q 044262 390 -----GTERLLIYEF 399 (399)
Q Consensus 390 -----~~~~~lv~Ey 399 (399)
++.+||||||
T Consensus 88 ~~~~~~DqLWLVMEf 102 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEF 102 (953)
T ss_pred ecCCCCCeEEEEeec
Confidence 5789999998
No 345
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.26 E-value=3.5e-06 Score=76.67 Aligned_cols=76 Identities=21% Similarity=0.301 Sum_probs=61.6
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~Ey 399 (399)
|...+.||+|++|.||++.... ++.+++|.+... .....+.+.+|++++++++|+|++++.+.+.. ....+++|||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 5667899999999999998754 678999998643 23345578999999999999999999988754 3457899986
No 346
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.26 E-value=1.8e-06 Score=82.38 Aligned_cols=78 Identities=18% Similarity=0.404 Sum_probs=62.8
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----CeE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG-----TER 393 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 393 (399)
..|...+.||+|+||.||++... .+..||||.+... .......+.+|+.++..++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 45777889999999999999864 4789999998653 223345678899999999999999999987643 247
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
+||+||
T Consensus 85 ~lv~e~ 90 (337)
T cd07858 85 YIVYEL 90 (337)
T ss_pred EEEEeC
Confidence 999987
No 347
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.25 E-value=1.1e-06 Score=86.83 Aligned_cols=77 Identities=23% Similarity=0.387 Sum_probs=65.7
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
-|..++.||.|+-|.|-.|+.. .|+.+|||.+.+... .......+||.+|+-+.|||+++|+.++.+..++|||+|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 3566799999999999999864 599999999976522 223357899999999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 93 y 93 (786)
T KOG0588|consen 93 Y 93 (786)
T ss_pred e
Confidence 8
No 348
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.24 E-value=8.1e-07 Score=86.41 Aligned_cols=76 Identities=25% Similarity=0.392 Sum_probs=62.0
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCC---CCCccceeEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQ---HRNLVRLLGFSFEG 390 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~ 390 (399)
.|...+++|+|+||+|+.+.++. ...|.||.+.+..- ........||.+|..++ |+||++++.++.++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 46778999999999999999865 46799999865421 01113567999999997 99999999999999
Q ss_pred CeEEEEEe
Q 044262 391 TERLLIYE 398 (399)
Q Consensus 391 ~~~~lv~E 398 (399)
+..+|++|
T Consensus 642 d~yyl~te 649 (772)
T KOG1152|consen 642 DYYYLETE 649 (772)
T ss_pred CeeEEEec
Confidence 99999987
No 349
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.23 E-value=1.8e-06 Score=85.33 Aligned_cols=76 Identities=24% Similarity=0.421 Sum_probs=63.6
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-C-----CCccceeEEEEeCCeEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-H-----RNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~l 395 (399)
.|.+.+.||+|.||+|.|+.-. .++.||||+++... .-..+-..|+.+|..|+ | -|+|++++++.-.++++|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 5677899999999999999864 48999999996543 33446778999999886 4 399999999999999999
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
|+|.
T Consensus 266 VfEL 269 (586)
T KOG0667|consen 266 VFEL 269 (586)
T ss_pred eehh
Confidence 9984
No 350
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.23 E-value=1.6e-06 Score=80.02 Aligned_cols=75 Identities=29% Similarity=0.504 Sum_probs=64.1
Q ss_pred cccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
...+.||+|.||.||++.... ++.+++|.+.... ....+.+..|+.+++.++|+||+++.+++...+..++|+||
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 345789999999999999864 8899999987652 33345788999999999999999999999988899999997
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.22 E-value=4.1e-06 Score=77.54 Aligned_cols=75 Identities=29% Similarity=0.465 Sum_probs=59.1
Q ss_pred cccCcccccCceEEEEEEEcC-CcEEEEEEecCCC--hhhHHHHHHHHHHHhcC---CCCCccceeEEEEeCCe-----E
Q 044262 325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS--VQGELEFKNEVLLVARL---QHRNLVRLLGFSFEGTE-----R 393 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~-----~ 393 (399)
...++||+|.||.||++..+. +..+|+|.+.... ......+.+|+.++.++ +|+|++++++++...+. .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 456889999999999999865 8899999997432 12234567787766555 69999999999987766 8
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
+++|||
T Consensus 82 ~l~~e~ 87 (287)
T cd07838 82 TLVFEH 87 (287)
T ss_pred EEEehh
Confidence 999986
No 352
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.21 E-value=1.4e-06 Score=81.07 Aligned_cols=84 Identities=25% Similarity=0.382 Sum_probs=64.4
Q ss_pred hhHHhhcCCCcccCcccccCceEEEEEEEcC------CcEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEE
Q 044262 315 STIRDATNNFSTDNKLGQGGFGAVYKGRLSH------GQEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFS 387 (399)
Q Consensus 315 ~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~------g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~ 387 (399)
.++...++++....++-+|.||.||+|.|.+ .+.|-||.++.. +.-...-++.|..++..+.|||+++..|++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 4555566778888999999999999997743 345778887665 333445689999999999999999999999
Q ss_pred EeC-CeEEEEEe
Q 044262 388 FEG-TERLLIYE 398 (399)
Q Consensus 388 ~~~-~~~~lv~E 398 (399)
.+. +.++++|.
T Consensus 357 ie~~~~P~V~y~ 368 (563)
T KOG1024|consen 357 IEDYATPFVLYP 368 (563)
T ss_pred eeccCcceEEEe
Confidence 875 34555554
No 353
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.21 E-value=3.1e-06 Score=78.66 Aligned_cols=76 Identities=25% Similarity=0.286 Sum_probs=62.3
Q ss_pred CcccCcccccCceEEEEEEEc----CCcEEEEEEecCCC----hhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS----HGQEIAVKRLSKNS----VQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~----~g~~vavK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 394 (399)
|...+.||+|+||.||++... +++.+|||.++... ....+.+.+|+.++..+ +|+||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 456789999999999998752 46789999986432 22345688999999999 5999999999998888899
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
|||||
T Consensus 82 lv~e~ 86 (288)
T cd05583 82 LILDY 86 (288)
T ss_pred EEEec
Confidence 99997
No 354
>PRK10345 hypothetical protein; Provisional
Probab=98.21 E-value=5.9e-06 Score=73.05 Aligned_cols=74 Identities=20% Similarity=0.276 Sum_probs=55.8
Q ss_pred CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-----CCCCccceeEEEEeCC---e-EE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-----QHRNLVRLLGFSFEGT---E-RL 394 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~ 394 (399)
+...+.||+|+||.||. .+.....+||.+........+.+.+|+..+..+ .||||++++|++..+. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34568999999999996 433333469988665444556799999999999 5799999999998763 3 33
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+|+||
T Consensus 82 ~I~e~ 86 (210)
T PRK10345 82 VIADF 86 (210)
T ss_pred EEecC
Confidence 77886
No 355
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.21 E-value=5e-06 Score=79.04 Aligned_cols=70 Identities=24% Similarity=0.285 Sum_probs=55.6
Q ss_pred ccccCceEEEEEEEc-CCcEEEEEEecCCC---hhhHHHHHHHHHHHhcC---CCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLS-HGQEIAVKRLSKNS---VQGELEFKNEVLLVARL---QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~-~g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|+||.||++... .++.||+|.+.... ......+..|..++..+ +||||+++.+.+...+..+|||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcC
Confidence 799999999999875 48899999986431 12233456677766654 699999999999999999999997
No 356
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.19 E-value=3.1e-06 Score=78.19 Aligned_cols=75 Identities=28% Similarity=0.464 Sum_probs=63.7
Q ss_pred cccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 325 STDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
...+.||+|++|.||++... +++.+++|.+..... .....+.+|+.+++.++|+||+++.+.+..++..++|+||
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 34578999999999999875 578899999865422 2345788999999999999999999999988999999997
No 357
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.19 E-value=3.8e-07 Score=82.41 Aligned_cols=77 Identities=22% Similarity=0.452 Sum_probs=61.4
Q ss_pred CCcccCcccccCceEEEEEEEcC-----CcEEEEEEecCCCh--hhHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKNSV--QGELEFKNEVLLVARLQHRNLVRLLGFSFE-GTERL 394 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~ 394 (399)
.|+....||+|.||.|||+.-++ ...+|+|.++.... .-.....+|+.++++++||||+.|.-++.+ +...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 45667889999999999996533 23689999875422 223467899999999999999999998887 66789
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
|++||
T Consensus 105 l~fdY 109 (438)
T KOG0666|consen 105 LLFDY 109 (438)
T ss_pred EEehh
Confidence 99998
No 358
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.19 E-value=1.7e-06 Score=83.10 Aligned_cols=78 Identities=19% Similarity=0.312 Sum_probs=63.8
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-EEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE-RLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lv~ 397 (399)
+++...++||+|+||.++....+ ++..+++|.+.-. ....++...+|+.++++++|||||.....+.+.+. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 34566789999999999876654 4678999988643 33344578999999999999999999999988877 99999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 84 ~Y 85 (426)
T KOG0589|consen 84 EY 85 (426)
T ss_pred ee
Confidence 98
No 359
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.19 E-value=1.1e-06 Score=87.36 Aligned_cols=71 Identities=30% Similarity=0.447 Sum_probs=62.2
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
-+||+|.||+||.|.-.+ -..+|||.+........+.+..||.+.+.|+|.|||+.+|.+.++..+.|.||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME 652 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME 652 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence 479999999999998544 45789999987766666789999999999999999999999999998888887
No 360
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.17 E-value=1.9e-06 Score=78.65 Aligned_cols=76 Identities=24% Similarity=0.385 Sum_probs=58.9
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC-----ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-----SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
|...++||+|+||.||++.... +..+++|.++.. ......++..|+.++.+++||||+++++.+...+..++|+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 5567899999999999998643 344555555431 2223346778999999999999999999998888899999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 82 e~ 83 (260)
T cd08222 82 EY 83 (260)
T ss_pred Ee
Confidence 97
No 361
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.16 E-value=2.6e-06 Score=85.80 Aligned_cols=77 Identities=21% Similarity=0.407 Sum_probs=57.3
Q ss_pred CCCcccCcccccCceEEEEEEEcC--CcEEEEE------------------EecCCChhhHHHHHHHHHHHhcCCCCCcc
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH--GQEIAVK------------------RLSKNSVQGELEFKNEVLLVARLQHRNLV 381 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~--g~~vavK------------------~l~~~~~~~~~~f~~E~~~l~~l~H~niv 381 (399)
+.|...++||+|+||.||++.++. +...++| .+. ........+.+|+.+|.+++|+|||
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCcC
Confidence 568888999999999999987532 1112222 111 1122345688999999999999999
Q ss_pred ceeEEEEeCCeEEEEEeC
Q 044262 382 RLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 382 ~l~g~~~~~~~~~lv~Ey 399 (399)
++++++...+..++|+|+
T Consensus 227 ~l~~~~~~~~~~~lv~e~ 244 (501)
T PHA03210 227 KIEEILRSEANTYMITQK 244 (501)
T ss_pred cEeEEEEECCeeEEEEec
Confidence 999999999999999874
No 362
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.15 E-value=6.5e-08 Score=84.53 Aligned_cols=78 Identities=27% Similarity=0.452 Sum_probs=63.4
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+.++..++||+|.|+.|++.... .|+..|+|.+... +..+.+++.+|+.+-+.|+|||||+|.....+....+||+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 44566789999999999987653 4777788776432 33456789999999999999999999998888888999998
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
+
T Consensus 91 ~ 91 (355)
T KOG0033|consen 91 L 91 (355)
T ss_pred c
Confidence 5
No 363
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.15 E-value=2.4e-06 Score=81.72 Aligned_cols=80 Identities=21% Similarity=0.389 Sum_probs=64.6
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe----
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE---- 392 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---- 392 (399)
..++|.....||+|+||.||++.... +..+|+|.+... .......+.+|+.++++++|+||+++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 34567788999999999999999854 788999998653 22334568889999999999999999987765554
Q ss_pred --EEEEEeC
Q 044262 393 --RLLIYEF 399 (399)
Q Consensus 393 --~~lv~Ey 399 (399)
.++|+||
T Consensus 93 ~~~~lv~e~ 101 (343)
T cd07851 93 QDVYLVTHL 101 (343)
T ss_pred ccEEEEEec
Confidence 8899986
No 364
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.14 E-value=5.4e-06 Score=75.05 Aligned_cols=70 Identities=27% Similarity=0.357 Sum_probs=60.2
Q ss_pred ccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|+||.||++.... ++.+++|.+..... .....+..|+.+++.++|+||+++++.+..++..+++|||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEec
Confidence 6999999999999754 78999999876422 2345789999999999999999999999888999999996
No 365
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=98.13 E-value=3.8e-06 Score=78.81 Aligned_cols=77 Identities=25% Similarity=0.278 Sum_probs=65.5
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCCh---hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSV---QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.|...+.||.|.-|.||.+.+.+ +...|+|.+.+... +.....+.|-++|..++||-|..|++.+......+|+||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45566899999999999999965 57899999977533 333456778899999999999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 158 y 158 (459)
T KOG0610|consen 158 Y 158 (459)
T ss_pred c
Confidence 8
No 366
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.10 E-value=1.5e-05 Score=72.71 Aligned_cols=72 Identities=21% Similarity=0.308 Sum_probs=55.8
Q ss_pred CcccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHHH-hcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLLV-ARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.||+|+||.||++... .++.||+|.+..... .....+..|..++ ...+|+|++++++.+...+..++|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEec
Confidence 56899999999999874 478999999865422 2223345555443 456899999999999999999999997
No 367
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.07 E-value=9e-07 Score=77.66 Aligned_cols=83 Identities=23% Similarity=0.327 Sum_probs=68.7
Q ss_pred HHhhcCCCcccCcccccCceEEEEEE-EcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC-----
Q 044262 317 IRDATNNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG----- 390 (399)
Q Consensus 317 l~~~~~~~~~~~~iG~G~fG~Vykg~-~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----- 390 (399)
+....++|.+.+.||+|+|..||.++ +.++..+|+|++...+.++.+..++|++.-++++|||+++++.+...+
T Consensus 16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 34445667888999999999999887 456889999999888777788899999999999999999999876543
Q ss_pred CeEEEEEeC
Q 044262 391 TERLLIYEF 399 (399)
Q Consensus 391 ~~~~lv~Ey 399 (399)
.+.||++.|
T Consensus 96 ~~~yll~Py 104 (302)
T KOG2345|consen 96 HEAYLLLPY 104 (302)
T ss_pred eeEEEEeeh
Confidence 347888765
No 368
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.06 E-value=9.9e-06 Score=76.27 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=57.5
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.+|.|+++.|+++.. .++.+|+|++... .....+.+.+|+.++..++|+||+++++++...+..+++|||
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEec
Confidence 4455566666666655 6889999998654 334456799999999999999999999999999999999997
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.04 E-value=1.2e-06 Score=77.55 Aligned_cols=77 Identities=25% Similarity=0.347 Sum_probs=62.7
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC-hhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS-VQGELEFKNEVLL-VARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+++....||.|.||.|+|-..+. |+..|||++.... ....+.++.|.+. |+.-+-||||+++|.+..+...|+-||+
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34455789999999999988754 8999999998763 3556678888874 5566789999999999998889998873
No 370
>PTZ00284 protein kinase; Provisional
Probab=98.04 E-value=1.3e-05 Score=80.24 Aligned_cols=82 Identities=18% Similarity=0.224 Sum_probs=59.8
Q ss_pred HHhhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC------CCccceeEEEEe
Q 044262 317 IRDATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH------RNLVRLLGFSFE 389 (399)
Q Consensus 317 l~~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H------~niv~l~g~~~~ 389 (399)
+....++|...++||+|+||.||++... .++.||||+++... ....++..|+.++.+++| .+++++..++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3345577888999999999999999874 47889999996532 223355667777666654 458888888765
Q ss_pred C-CeEEEEEeC
Q 044262 390 G-TERLLIYEF 399 (399)
Q Consensus 390 ~-~~~~lv~Ey 399 (399)
. ...+||||+
T Consensus 203 ~~~~~~iv~~~ 213 (467)
T PTZ00284 203 ETGHMCIVMPK 213 (467)
T ss_pred CCceEEEEEec
Confidence 4 568888875
No 371
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.99 E-value=1.1e-05 Score=70.49 Aligned_cols=71 Identities=20% Similarity=0.218 Sum_probs=50.0
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCCChh--h-------H-----------------HHHHHHHHHHhcCCCCCc
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ--G-------E-----------------LEFKNEVLLVARLQHRNL 380 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~--~-------~-----------------~~f~~E~~~l~~l~H~ni 380 (399)
...||+|+||.||+|...+|+.||||.++..... . . .....|++.|.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999888999999999654210 0 0 112348999999988876
Q ss_pred cceeEEEEeCCeEEEEEeC
Q 044262 381 VRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 381 v~l~g~~~~~~~~~lv~Ey 399 (399)
....... ....+|||||
T Consensus 82 ~~p~~~~--~~~~~iVmE~ 98 (190)
T cd05147 82 PCPEPIL--LKSHVLVMEF 98 (190)
T ss_pred CCCcEEE--ecCCEEEEEE
Confidence 4433322 2234899997
No 372
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=97.98 E-value=6.7e-06 Score=79.66 Aligned_cols=78 Identities=24% Similarity=0.342 Sum_probs=64.3
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 396 (399)
.+|..++.||+|.|.+|+++.-. .++.+|||++.+. .....+-..+|-..|..| .||.|++|+--+.+...+|.|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 45777899999999999999864 4889999999764 222333467788888888 899999999998888899999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 153 Le~ 155 (604)
T KOG0592|consen 153 LEY 155 (604)
T ss_pred EEe
Confidence 997
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=97.98 E-value=2.5e-05 Score=74.35 Aligned_cols=76 Identities=22% Similarity=0.335 Sum_probs=58.1
Q ss_pred CcccCcccccCceEEEEEEEcC---CcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeC----CeE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH---GQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEG----TER 393 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~---g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~----~~~ 393 (399)
|...+.||+|+||.||++.... +..+|+|.+... .....+.+.+|+.++.++ +|+||+++++.+... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 5567889999999999999743 678999998643 222345688999999999 599999999876433 346
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
++++||
T Consensus 82 ~~~~e~ 87 (332)
T cd07857 82 YLYEEL 87 (332)
T ss_pred EEEEec
Confidence 777775
No 374
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.97 E-value=4.3e-05 Score=66.38 Aligned_cols=70 Identities=33% Similarity=0.588 Sum_probs=60.7
Q ss_pred ccccCceEEEEEEEcC-CcEEEEEEecCCChh-hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ-GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
||+|.+|.||++.... +..+++|.+...... ....+.+|+..+..++|+++++++++.......++++||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~ 72 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEY 72 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEec
Confidence 6899999999999865 889999998765432 345799999999999999999999999888889999986
No 375
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=97.95 E-value=4e-05 Score=70.99 Aligned_cols=71 Identities=30% Similarity=0.389 Sum_probs=53.3
Q ss_pred cccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHHHH---HhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 329 KLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEVLL---VARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 329 ~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~~~---l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.||+|+||.||++... +++.+|+|.+..... .....+.+|..+ +...+|+||+.+.+.+..++..++||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence 4899999999999875 478999998865321 112234455433 3345799999999999888899999997
No 376
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.94 E-value=9.3e-07 Score=87.35 Aligned_cols=81 Identities=21% Similarity=0.382 Sum_probs=70.1
Q ss_pred hhcCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
.+.++|.....+|.|.+|.|||+.-. .++..|||.++-.........+.|+.+++..+|+|||.++|.+...+.+|+.|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 45566778899999999999999864 47889999997665555667788999999999999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 92 Ey 93 (829)
T KOG0576|consen 92 EY 93 (829)
T ss_pred Ee
Confidence 98
No 377
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.94 E-value=7.8e-06 Score=79.39 Aligned_cols=78 Identities=22% Similarity=0.357 Sum_probs=67.2
Q ss_pred CCCcccCcccccCceEEEEEEEcCCcEEEEEEecC--CChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSK--NSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~--~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E 398 (399)
..|++.++||.|+-..|||....+.+.+|+|++.. .+.+....|.+|+.+|.+| .|.+||+|+++-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 34677899999999999999987778888887643 3556677899999999999 58999999999999999999999
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 441 ~ 441 (677)
T KOG0596|consen 441 C 441 (677)
T ss_pred c
Confidence 7
No 378
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=97.87 E-value=5.7e-05 Score=69.86 Aligned_cols=71 Identities=31% Similarity=0.365 Sum_probs=53.4
Q ss_pred cccccCceEEEEEEEc-CCcEEEEEEecCCCh---hhHHHHHHHH---HHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 329 KLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV---QGELEFKNEV---LLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 329 ~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~---~~~~~f~~E~---~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+||+|+||.||++... .++.||+|.+..... .....+..|. ..+....|+||+++.+.+...+..++|+||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEec
Confidence 4899999999999864 478999999865421 1122244443 344556899999999999988999999997
No 379
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=97.86 E-value=8.9e-05 Score=75.39 Aligned_cols=77 Identities=14% Similarity=0.236 Sum_probs=56.5
Q ss_pred CCCcccCcccccCceEEEEEEEcCCcEEEEEEe-cCC-Ch------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRL-SKN-SV------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTER 393 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l-~~~-~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 393 (399)
..+...++||+|+||.||++.+... .+++|.. .+. .. ...+.+.+|++++..++|++++....+....+..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3445678999999999999988544 3444432 211 10 1234688999999999999999888887777778
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
+|||||
T Consensus 412 ~lv~E~ 417 (535)
T PRK09605 412 TIVMEY 417 (535)
T ss_pred EEEEEe
Confidence 999997
No 380
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.85 E-value=5.4e-05 Score=66.00 Aligned_cols=71 Identities=21% Similarity=0.280 Sum_probs=52.2
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCCChh---------------------h-----HHHHHHHHHHHhcCCCCCc
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ---------------------G-----ELEFKNEVLLVARLQHRNL 380 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~---------------------~-----~~~f~~E~~~l~~l~H~ni 380 (399)
...||+|+||.||++...+|+.||||.++..... . ...+..|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999998754210 0 1124578899999999988
Q ss_pred cceeEEEEeCCeEEEEEeC
Q 044262 381 VRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 381 v~l~g~~~~~~~~~lv~Ey 399 (399)
.....+... ..+|||||
T Consensus 82 ~~p~~~~~~--~~~lVmE~ 98 (190)
T cd05145 82 PVPEPILLK--KNVLVMEF 98 (190)
T ss_pred CCceEEEec--CCEEEEEE
Confidence 655444332 24799997
No 381
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.84 E-value=2.7e-06 Score=73.83 Aligned_cols=76 Identities=21% Similarity=0.466 Sum_probs=61.5
Q ss_pred cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCC--eEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGT--ERLLI 396 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~lv 396 (399)
.+++++.+++|+|.++.|+.|.. .+.+.+.||.|++-. .+...+|+.+|..|. ||||++|+....++. ...||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 35677789999999999999973 467889999997543 347889999999997 999999999887653 36777
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
+||
T Consensus 114 FE~ 116 (338)
T KOG0668|consen 114 FEY 116 (338)
T ss_pred hhh
Confidence 775
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.83 E-value=5.2e-05 Score=67.75 Aligned_cols=66 Identities=27% Similarity=0.497 Sum_probs=57.8
Q ss_pred CceEEEEEEEcC-CcEEEEEEecCCChhh-HHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 334 GFGAVYKGRLSH-GQEIAVKRLSKNSVQG-ELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 334 ~fG~Vykg~~~~-g~~vavK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+||.||++.... ++.+++|.+....... .+.+.+|++.+.+++|+|++++.+.+......++++||
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 68 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEY 68 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeC
Confidence 589999999865 8899999997654433 57899999999999999999999999988999999986
No 383
>PRK14879 serine/threonine protein kinase; Provisional
Probab=97.81 E-value=5.9e-05 Score=66.70 Aligned_cols=71 Identities=11% Similarity=0.204 Sum_probs=56.7
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++||+|.+|.||+|.. .|..+++|....... .....+.+|+.++..++|+++.....++...+..+|+|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999988 677899998654321 1123588999999999999998888777777788999987
No 384
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=97.75 E-value=0.00012 Score=67.26 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=52.1
Q ss_pred CCCcccCc--ccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNK--LGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~--iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
+++...+. ||+|.||.||++..+ ++..+++|.+........ |+..... .+|+||+++++.+...+..++||
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~ 88 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIM 88 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEE
Confidence 34444455 499999999999874 477899998865321111 2222221 26999999999999999999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 89 e~ 90 (267)
T PHA03390 89 DY 90 (267)
T ss_pred Ec
Confidence 97
No 385
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.74 E-value=1.8e-05 Score=72.24 Aligned_cols=78 Identities=23% Similarity=0.234 Sum_probs=64.3
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
++|...++||+|.||+|....-+ .++..|+|+|++. .......-+.|-++|...+||-+..|.-.+...+.++.||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 45666799999999999987654 4788999999764 3334446788999999999999999987777889999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 248 ey 249 (516)
T KOG0690|consen 248 EY 249 (516)
T ss_pred EE
Confidence 97
No 386
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=97.70 E-value=7.7e-05 Score=66.55 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=60.3
Q ss_pred cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhH---H------HHHHHHHHHhcCCCCCccceeEEEEeC-
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGE---L------EFKNEVLLVARLQHRNLVRLLGFSFEG- 390 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~---~------~f~~E~~~l~~l~H~niv~l~g~~~~~- 390 (399)
..+|...+++|+|+||.||.... ++..+++|.+........ . .+.+|+..+.+++|++|..+..+....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 46788899999999999998665 566899999965422111 1 267899999999999999998875532
Q ss_pred -------CeEEEEEeC
Q 044262 391 -------TERLLIYEF 399 (399)
Q Consensus 391 -------~~~~lv~Ey 399 (399)
...+|+|||
T Consensus 109 ~~~~~~~~~~~lvmEy 124 (232)
T PRK10359 109 RKTLRYAHTYIMLIEY 124 (232)
T ss_pred cccccccCCeEEEEEE
Confidence 357899997
No 387
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=97.70 E-value=8.8e-05 Score=64.97 Aligned_cols=70 Identities=16% Similarity=0.303 Sum_probs=53.3
Q ss_pred cccccCceEEEEEEEcCCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 329 KLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV--------QGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 329 ~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.||+|+||.||+|.+ ++..+++|....... .....+.+|++++..++|+++.....+....+..+|||||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 489999999999996 678899998654311 1124578899999999998876666666666777899986
No 388
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.59 E-value=9.8e-06 Score=85.84 Aligned_cols=79 Identities=27% Similarity=0.415 Sum_probs=64.7
Q ss_pred cCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
+-+++....||.|.||.||-+.- .+|+..|+|.++-. .......+.+|+.++..|+|||+|+.+|+-...+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 34566789999999999999985 45888999988654 2233356889999999999999999999988888888888
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 1314 Ey 1315 (1509)
T KOG4645|consen 1314 EY 1315 (1509)
T ss_pred HH
Confidence 76
No 389
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=97.57 E-value=1.2e-05 Score=84.18 Aligned_cols=86 Identities=20% Similarity=0.200 Sum_probs=71.3
Q ss_pred hhhHHhhcCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 044262 314 FSTIRDATNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFE 389 (399)
Q Consensus 314 ~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 389 (399)
..+++-..++|.+.++||+|+||.|.....+. ++.+|.|+|.++. .....-|..|-.+|..-+.+.||+|.-.+-+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 34556667889999999999999999988855 7788999998742 2233458888889998899999999988888
Q ss_pred CCeEEEEEeC
Q 044262 390 GTERLLIYEF 399 (399)
Q Consensus 390 ~~~~~lv~Ey 399 (399)
...+||||||
T Consensus 147 ~~~LYlVMdY 156 (1317)
T KOG0612|consen 147 ERYLYLVMDY 156 (1317)
T ss_pred ccceEEEEec
Confidence 9999999998
No 390
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.45 E-value=0.00044 Score=60.63 Aligned_cols=72 Identities=18% Similarity=0.233 Sum_probs=51.4
Q ss_pred CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChh----------------------hHHHHHHHHHHHhcCCCCC--
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ----------------------GELEFKNEVLLVARLQHRN-- 379 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~----------------------~~~~f~~E~~~l~~l~H~n-- 379 (399)
+...+.||+|+||.||++..++|+.||||.+...... ....+..|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 5567899999999999999888999999987543200 0123667888888888774
Q ss_pred ccceeEEEEeCCeEEEEEeC
Q 044262 380 LVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 380 iv~l~g~~~~~~~~~lv~Ey 399 (399)
+.+.++ ....++||||
T Consensus 97 v~~~~~----~~~~~lv~e~ 112 (198)
T cd05144 97 VPKPID----WNRHAVVMEY 112 (198)
T ss_pred CCceee----cCCceEEEEE
Confidence 444443 2445888886
No 391
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.43 E-value=0.00028 Score=67.87 Aligned_cols=77 Identities=19% Similarity=0.325 Sum_probs=61.2
Q ss_pred CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-----C---CCccceeEEEEe---
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-----H---RNLVRLLGFSFE--- 389 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~niv~l~g~~~~--- 389 (399)
..|....+||.|.|.+||.+.- .+.+.||+|+.+.. ....+..+.||++|.+++ | .+||+|+..+..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 4577789999999999999975 45678999998653 344567899999999873 3 479999998864
Q ss_pred -CCeEEEEEeC
Q 044262 390 -GTERLLIYEF 399 (399)
Q Consensus 390 -~~~~~lv~Ey 399 (399)
+.+.+||+|+
T Consensus 157 NG~HVCMVfEv 167 (590)
T KOG1290|consen 157 NGQHVCMVFEV 167 (590)
T ss_pred CCcEEEEEehh
Confidence 4679999986
No 392
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.37 E-value=9.2e-05 Score=73.14 Aligned_cols=75 Identities=28% Similarity=0.390 Sum_probs=54.7
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEec--C--CChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCe--EEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLS--K--NSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTE--RLLI 396 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~--~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~lv 396 (399)
+...++||+|.|-+||||.-.. |..||=-.++ . .+....+.|..|+.+|+.|+|+|||+++..+..... .-+|
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 3456899999999999998632 5556522221 1 133445679999999999999999999998887655 4555
Q ss_pred Ee
Q 044262 397 YE 398 (399)
Q Consensus 397 ~E 398 (399)
+|
T Consensus 122 TE 123 (632)
T KOG0584|consen 122 TE 123 (632)
T ss_pred ee
Confidence 55
No 393
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.36 E-value=2.6e-06 Score=75.03 Aligned_cols=77 Identities=27% Similarity=0.507 Sum_probs=56.8
Q ss_pred CCcccCcccccCceEEEEEEEcC-CcEEEEEEecC-C-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC--------C
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSK-N-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG--------T 391 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~-~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~ 391 (399)
.+....+||+|.||.||++..++ |+.||+|+..- . ...-...-++|+.+|..+.|+|++.++..|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34556899999999999998755 67788876532 2 222234678999999999999999999877531 2
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
.++||++|
T Consensus 98 t~ylVf~~ 105 (376)
T KOG0669|consen 98 TFYLVFDF 105 (376)
T ss_pred eeeeeHHH
Confidence 36788754
No 394
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.33 E-value=0.00081 Score=62.76 Aligned_cols=77 Identities=17% Similarity=0.289 Sum_probs=48.8
Q ss_pred CCCcccCcccccCceEEEEEEEcCC----cEEEEEEecCCChhh-----------HHHHHHHHHHHhcCCCCCccceeEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHG----QEIAVKRLSKNSVQG-----------ELEFKNEVLLVARLQHRNLVRLLGF 386 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g----~~vavK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~niv~l~g~ 386 (399)
+.|...++||+|+||.||++...++ ..+++|......... ......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4677889999999999999997543 355666533221110 0112333445667799999999987
Q ss_pred EEeCC----eEEEEEe
Q 044262 387 SFEGT----ERLLIYE 398 (399)
Q Consensus 387 ~~~~~----~~~lv~E 398 (399)
..... ..++++|
T Consensus 92 ~~~~~~~~~~~~~~~~ 107 (294)
T PHA02882 92 GSFKRCRMYYRFILLE 107 (294)
T ss_pred eeEecCCceEEEEEEe
Confidence 65443 2355555
No 395
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=97.30 E-value=7.5e-05 Score=70.89 Aligned_cols=77 Identities=23% Similarity=0.287 Sum_probs=58.8
Q ss_pred CCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC---Ch----hhHHHHHHHHHHHhcCCCCCccceeEEEE-eCCeE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN---SV----QGELEFKNEVLLVARLQHRNLVRLLGFSF-EGTER 393 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~---~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~-~~~~~ 393 (399)
.|-..++||+|+|..|||+.- ...+-||||+-... .. ...+...+|-.+...|+||.||+++.++. +.+.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 355678999999999999973 34577999975432 11 11245778999999999999999999886 45668
Q ss_pred EEEEeC
Q 044262 394 LLIYEF 399 (399)
Q Consensus 394 ~lv~Ey 399 (399)
+-|+||
T Consensus 544 CTVLEY 549 (775)
T KOG1151|consen 544 CTVLEY 549 (775)
T ss_pred eeeeee
Confidence 888887
No 396
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.30 E-value=0.0006 Score=56.05 Aligned_cols=70 Identities=16% Similarity=0.106 Sum_probs=57.1
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC--CCccceeEEEEeCCeEEEEEeC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH--RNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~Ey 399 (399)
.+.||+|.++.||++...+ ..+++|....... ...+..|+..+..++| .++.++++.....+..++++||
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 4679999999999999844 7899998865433 4578999999999976 4888988887766778999986
No 397
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.23 E-value=0.00018 Score=67.90 Aligned_cols=78 Identities=24% Similarity=0.422 Sum_probs=64.8
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC----CcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEE
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH----GQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERL 394 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~----g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 394 (399)
..+.+...++||+|.|+.||++.... .+.||+|.+...+. .....+|+++|..+ .|.||+++.++...++...
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 34557778999999999999998643 56899999865432 23588999999988 5899999999999999999
Q ss_pred EEEeC
Q 044262 395 LIYEF 399 (399)
Q Consensus 395 lv~Ey 399 (399)
+|+||
T Consensus 112 ivlp~ 116 (418)
T KOG1167|consen 112 IVLPY 116 (418)
T ss_pred EEecc
Confidence 99997
No 398
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=97.21 E-value=0.00075 Score=60.76 Aligned_cols=62 Identities=23% Similarity=0.225 Sum_probs=50.4
Q ss_pred cCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 333 GGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 333 G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|.||.||++... +++.+|+|.+.... .+.+|...+....||||+++++++...+..+|||||
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 66 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQH 66 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEec
Confidence 889999999864 47899999986543 344555556666799999999999989999999997
No 399
>smart00090 RIO RIO-like kinase.
Probab=97.17 E-value=0.001 Score=60.16 Aligned_cols=73 Identities=21% Similarity=0.256 Sum_probs=50.6
Q ss_pred CCcccCcccccCceEEEEEE--EcCCcEEEEEEecCCChh------------------------hHHHHHHHHHHHhcCC
Q 044262 323 NFSTDNKLGQGGFGAVYKGR--LSHGQEIAVKRLSKNSVQ------------------------GELEFKNEVLLVARLQ 376 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~--~~~g~~vavK~l~~~~~~------------------------~~~~f~~E~~~l~~l~ 376 (399)
.+...+.||+|+||.||+|. ..+|+.||+|.++..... ....+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35567899999999999998 567999999998643210 0123568999999987
Q ss_pred CCC--ccceeEEEEeCCeEEEEEeC
Q 044262 377 HRN--LVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 377 H~n--iv~l~g~~~~~~~~~lv~Ey 399 (399)
|.+ +.+.++. ...+|||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~ 129 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEF 129 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEE
Confidence 633 3333332 234799986
No 400
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.13 E-value=0.0003 Score=71.76 Aligned_cols=72 Identities=29% Similarity=0.403 Sum_probs=56.4
Q ss_pred CcccCcccccCce-EEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFG-AVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG-~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+++|.|.-| .||+|.+ +|+.||||++-... ..-..+||..|..- .|||||++++.-......||..|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 4556788999886 5699999 78899999985432 22357899988765 799999998887777888888773
No 401
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=96.88 E-value=0.0023 Score=55.24 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=27.2
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~ 357 (399)
.+.||+|+||.||++...+++.||||.+...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~ 32 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG 32 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence 4679999999999999877999999998653
No 402
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.84 E-value=0.00017 Score=67.98 Aligned_cols=78 Identities=22% Similarity=0.179 Sum_probs=59.6
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 396 (399)
.+|....+||+|+||+|..++-+. .+..|||+|++. ...+.+--+.|-++|.-. +-|-+|+|..++..-+.++.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 356778999999999999998754 567999999764 222233345666666644 567899999888888999999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 429 MEy 431 (683)
T KOG0696|consen 429 MEY 431 (683)
T ss_pred EEE
Confidence 998
No 403
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=96.82 E-value=0.00097 Score=57.47 Aligned_cols=80 Identities=21% Similarity=0.319 Sum_probs=62.6
Q ss_pred hhcCCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCC-ChhhHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeEEE
Q 044262 319 DATNNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN-SVQGELEFKNEVLL-VARLQHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 319 ~~~~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~-~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~l 395 (399)
.+.+.+.....||+|++|.|-+-.+ .+|+..|||++... ..+..+..++|+.+ ++....|-+|+++|........|+
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 3444455568899999999977665 46899999999765 44555678888875 556688999999999888888898
Q ss_pred EEe
Q 044262 396 IYE 398 (399)
Q Consensus 396 v~E 398 (399)
-||
T Consensus 123 cME 125 (282)
T KOG0984|consen 123 CME 125 (282)
T ss_pred eHH
Confidence 887
No 404
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.81 E-value=0.00081 Score=66.84 Aligned_cols=78 Identities=23% Similarity=0.250 Sum_probs=63.3
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChh---hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
.-|...+.||-|+||.|-.+...+ ...+|.|.|++.+.- .......|-.+|.+-+.+.||+|+-.+.+.+.+|.||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 347778999999999999876534 456899999775432 2335678889999999999999998888899999999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 709 dY 710 (1034)
T KOG0608|consen 709 DY 710 (1034)
T ss_pred ec
Confidence 98
No 405
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.81 E-value=0.0011 Score=58.35 Aligned_cols=76 Identities=22% Similarity=0.385 Sum_probs=56.6
Q ss_pred CCCcccCcccccCceEEEEEEE-cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC-CCccceeEEEEeCCeEEEEEeC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH-RNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+...++||.|+||.+|.|.. .+|+.||||.=.... ...++..|..+...|+| ..|.++.-+..+.+.-.||||.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 4577789999999999999985 569999999754332 22357888888888876 3555555566677777888874
No 406
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.70 E-value=0.0021 Score=65.68 Aligned_cols=38 Identities=32% Similarity=0.628 Sum_probs=32.0
Q ss_pred hcCCCcccCcccccCceEEEEEEEcC-----CcEEEEEEecCC
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSH-----GQEIAVKRLSKN 357 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~-----g~~vavK~l~~~ 357 (399)
..++|...++||+|+||.||+|...+ +..||+|++...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~ 172 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEY 172 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEeccc
Confidence 45678889999999999999999854 578999998653
No 407
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=96.63 E-value=0.0014 Score=58.79 Aligned_cols=74 Identities=23% Similarity=0.386 Sum_probs=56.6
Q ss_pred cccCcccccCceEEEEEEEcC-CcEEEEEEecCC-ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEEEe
Q 044262 325 STDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN-SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E 398 (399)
+....||.|..|.|+|..+.. |..+|||.+... .....+..+..+.++.+- ..|.||+.+|++......++-||
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 345789999999999999854 789999999775 444455677777766654 47999999999988766555444
No 408
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=96.51 E-value=0.0045 Score=61.17 Aligned_cols=31 Identities=32% Similarity=0.509 Sum_probs=28.0
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~ 357 (399)
.+.||.|++|+||+|.+++|+.||||..+..
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~ 152 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPG 152 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence 4679999999999999999999999998654
No 409
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.51 E-value=0.0012 Score=59.22 Aligned_cols=65 Identities=22% Similarity=0.433 Sum_probs=51.6
Q ss_pred CcccCcccccCceEEEEEEEc-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSF 388 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 388 (399)
++.+..||-|.||.||...-+ +|+.||.|++..- +....+.+.+|+++|.-++|.|++.+++...
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQ 122 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQ 122 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcC
Confidence 345688999999999987764 4889999988542 3334567999999999999999999887653
No 410
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.0012 Score=59.31 Aligned_cols=78 Identities=17% Similarity=0.286 Sum_probs=61.1
Q ss_pred CCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCCh--------hhHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSV--------QGELEFKNEVLLVARL-QHRNLVRLLGFSFEGT 391 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 391 (399)
..+...+.||.|..+.|-+...+ .|...|+|++..... ...+.-.+|+.+|+++ .||+|+.|.+++..+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 34566789999999998888765 478899999864311 1234567899999987 7999999999998888
Q ss_pred eEEEEEeC
Q 044262 392 ERLLIYEF 399 (399)
Q Consensus 392 ~~~lv~Ey 399 (399)
..++|+|.
T Consensus 97 F~FlVFdl 104 (411)
T KOG0599|consen 97 FVFLVFDL 104 (411)
T ss_pred hhhhhhhh
Confidence 88888873
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=96.26 E-value=0.019 Score=53.04 Aligned_cols=74 Identities=32% Similarity=0.514 Sum_probs=59.9
Q ss_pred CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChh---hHHHHHHHHHHHhcCCCC-CccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ---GELEFKNEVLLVARLQHR-NLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~---~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~Ey 399 (399)
|...+.||.|.||.||++... ..+++|.+...... ....|.+|+.++..+.|+ +++++..........++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 345678999999999999986 77899998765222 366899999999999988 799999998666667888875
No 412
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=96.25 E-value=0.002 Score=61.74 Aligned_cols=77 Identities=27% Similarity=0.346 Sum_probs=62.0
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCC---hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNS---VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
+.|..-.+||+|+||.|+-.+... |...|.|.|.+.. .+...-.++|-.+|.+++.+-||.|--.+...+.++||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 346777899999999999988754 8888998886542 223345788999999999999999987888888899987
Q ss_pred e
Q 044262 398 E 398 (399)
Q Consensus 398 E 398 (399)
.
T Consensus 265 t 265 (591)
T KOG0986|consen 265 T 265 (591)
T ss_pred E
Confidence 5
No 413
>PRK12274 serine/threonine protein kinase; Provisional
Probab=96.23 E-value=0.018 Score=50.72 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=50.1
Q ss_pred ccCcccccCceEEEEEEEcCCcEEEEEEecCCChh----hHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262 326 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQ----GELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 326 ~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~----~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
....|++|.||.|+...- .+..++.+.+.....- ...-|.+|+++|.+++ |+++.+++++ +..+++|||
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 457899999999995554 5677877777543221 1124789999999995 5789999876 346888886
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.19 E-value=0.0093 Score=56.54 Aligned_cols=77 Identities=23% Similarity=0.350 Sum_probs=55.9
Q ss_pred CCcccCcccccCceEEEEEEEcCC--cEEEEEEecCCChhhHHHHHHHHHHHhcCCC----CCccceeEEE-EeCCeEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHG--QEIAVKRLSKNSVQGELEFKNEVLLVARLQH----RNLVRLLGFS-FEGTERLL 395 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g--~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l 395 (399)
.|...++||+|+||.||++.-... ..+|+|.-..........+..|+.++..+.+ +++.+++... ......+|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 678889999999999999986443 4788887655422222257788888888763 4777777776 35667888
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||+.
T Consensus 99 VM~l 102 (322)
T KOG1164|consen 99 VMSL 102 (322)
T ss_pred EEec
Confidence 8863
No 415
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=96.03 E-value=0.0046 Score=62.32 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=29.9
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN 357 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~ 357 (399)
..|.. +.||.|++|+||++.+++ |+.||||.+++.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 34554 789999999999999987 999999999754
No 416
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=95.89 E-value=0.0052 Score=59.92 Aligned_cols=75 Identities=24% Similarity=0.357 Sum_probs=60.0
Q ss_pred CCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCC------CCCccceeEEEEeCCeEEE
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ------HRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~------H~niv~l~g~~~~~~~~~l 395 (399)
.|......|+|-|+.|-++.-. .|..||||+|..+.. ..+.=+.|+++|.+|+ .-|.++|+-.+...++++|
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl 511 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL 511 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence 3555667899999999999753 478999999976543 2345678999999985 3488999988888999999
Q ss_pred EEe
Q 044262 396 IYE 398 (399)
Q Consensus 396 v~E 398 (399)
|+|
T Consensus 512 VFE 514 (752)
T KOG0670|consen 512 VFE 514 (752)
T ss_pred Eeh
Confidence 998
No 417
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.72 E-value=0.0044 Score=57.11 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=60.8
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv 396 (399)
.+|....+||+|+|.+|....++. .+.+|+|.+++. ........+.|-.++..- +||-+|.|..++.....++.|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 467788999999999999988754 678999998764 333344456666555543 799999999998888889999
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
.||
T Consensus 330 iey 332 (593)
T KOG0695|consen 330 IEY 332 (593)
T ss_pred EEE
Confidence 987
No 418
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.58 E-value=0.0018 Score=58.03 Aligned_cols=72 Identities=22% Similarity=0.402 Sum_probs=56.1
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+|.+..-|..|+|.++ |..+.+|+|... .....++|..|...|+-+.||||+..+|.|..+..+.++..|
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~ 268 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY 268 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence 457788888999999994 555667777544 333345799999999999999999999999888777776554
No 419
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=95.56 E-value=0.0074 Score=56.64 Aligned_cols=77 Identities=17% Similarity=0.241 Sum_probs=58.7
Q ss_pred cCCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcCCCC------CccceeEEEEeCCeE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARLQHR------NLVRLLGFSFEGTER 393 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~------niv~l~g~~~~~~~~ 393 (399)
+..|.+...+|+|.||.|-+..-.. +..||||+++.-. ...+..+-|++++.++.+. -+|++.+++.-.+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 4567788999999999999887543 6889999986432 3345678899999998432 366777777777888
Q ss_pred EEEEe
Q 044262 394 LLIYE 398 (399)
Q Consensus 394 ~lv~E 398 (399)
+||+|
T Consensus 167 Civfe 171 (415)
T KOG0671|consen 167 CIVFE 171 (415)
T ss_pred EEEEe
Confidence 99988
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.24 E-value=0.021 Score=52.93 Aligned_cols=75 Identities=21% Similarity=0.451 Sum_probs=48.3
Q ss_pred CCCcccCcccccCceEEEEEE-EcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGR-LSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~-~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E 398 (399)
-+|...++||+|.||.++.|. +-+++.||||.=...+ ..-++..|-+..+.|. -++|-..+-+-.++..-.||+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 357778999999999999997 3468999999643322 2234556665555543 4566665433334444556655
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=95.05 E-value=0.013 Score=58.53 Aligned_cols=75 Identities=31% Similarity=0.391 Sum_probs=58.4
Q ss_pred cCCCcccCcccccCceEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhc-CCCCCccceeEEEEeCCeEEEEEe
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVAR-LQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
++.+.....+|+|+|+.|-.+... .++..+||++.+.. .+-.+|+.++.. -+|+||+++.+.+..+.+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 345556677999999999988864 47788999997652 234566655444 479999999999999999999998
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
+
T Consensus 397 ~ 397 (612)
T KOG0603|consen 397 L 397 (612)
T ss_pred h
Confidence 4
No 422
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=94.71 E-value=0.01 Score=54.14 Aligned_cols=67 Identities=22% Similarity=0.247 Sum_probs=51.7
Q ss_pred CcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHH-HhcCCCCCccceeEEEEeC----CeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLL-VARLQHRNLVRLLGFSFEG----TERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~----~~~~lv~Ey 399 (399)
++||-|-.|+|.....+. ++..|+|.|.... ...+|+++ +..-.|||||+++.++.+. .-+++|||+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~ 140 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMEC 140 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeec
Confidence 789999999999888754 7889999986543 45677875 3344799999999988653 447889985
No 423
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=94.67 E-value=0.048 Score=44.53 Aligned_cols=30 Identities=30% Similarity=0.299 Sum_probs=15.9
Q ss_pred ceEEEeehHHHHHHHHHHHHHhhhhhheec
Q 044262 264 GTVIIIVVSTSIFIIALVALVTCVFLRRRK 293 (399)
Q Consensus 264 ~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r 293 (399)
.+++.++|++.++++++++++++++++|+|
T Consensus 49 nIVIGvVVGVGg~ill~il~lvf~~c~r~k 78 (154)
T PF04478_consen 49 NIVIGVVVGVGGPILLGILALVFIFCIRRK 78 (154)
T ss_pred cEEEEEEecccHHHHHHHHHhheeEEEecc
Confidence 467777777665555444444344433333
No 424
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=94.48 E-value=0.08 Score=46.67 Aligned_cols=72 Identities=13% Similarity=0.218 Sum_probs=52.8
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCCCh-hhHHHHHHHHHHHhcCCCC--CccceeEEEEeCC---eEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSV-QGELEFKNEVLLVARLQHR--NLVRLLGFSFEGT---ERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~-~~~~~f~~E~~~l~~l~H~--niv~l~g~~~~~~---~~~lv~Ey 399 (399)
+.|+.|..+.+|+....+|..+++|....... .....+..|.+++..+++. ++.+++.+..... ..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 56899999999999987668899998754322 1345788999999988764 4566777665432 45789886
No 425
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=94.26 E-value=0.14 Score=46.22 Aligned_cols=72 Identities=15% Similarity=0.137 Sum_probs=49.9
Q ss_pred cCccc-ccCceEEEEEEEcCCcEEEEEEecCCC-------------hhhHHHHHHHHHHHhcCCCCCc--cceeEEEEeC
Q 044262 327 DNKLG-QGGFGAVYKGRLSHGQEIAVKRLSKNS-------------VQGELEFKNEVLLVARLQHRNL--VRLLGFSFEG 390 (399)
Q Consensus 327 ~~~iG-~G~fG~Vykg~~~~g~~vavK~l~~~~-------------~~~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~ 390 (399)
..+|| .|+.|.||+... .+..++||.+.... ......+.+|+.++..++|+++ .+.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45787 888999998887 46788998875321 1122457889999999998875 6777764432
Q ss_pred Ce----EEEEEeC
Q 044262 391 TE----RLLIYEF 399 (399)
Q Consensus 391 ~~----~~lv~Ey 399 (399)
.. .+||+||
T Consensus 115 ~~~~~~~~lV~e~ 127 (239)
T PRK01723 115 HGLFYRADILIER 127 (239)
T ss_pred cCcceeeeEEEEe
Confidence 21 2488875
No 426
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=93.84 E-value=0.031 Score=50.38 Aligned_cols=77 Identities=18% Similarity=0.417 Sum_probs=54.5
Q ss_pred CCCcccCcccccCceEEEEEEEcC-CcEEEEEEecCCChhhHHHHHHHHHHHhcC-CCCCccceeEEEE-eCCeEEEEEe
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKNSVQGELEFKNEVLLVARL-QHRNLVRLLGFSF-EGTERLLIYE 398 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~-~~~~~~lv~E 398 (399)
+.|.+.+.||+|.||.+..++.+. .+.+++|.+.... ....+|.+|-----.| .|.||+.-+.+.. ..+....++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 346677999999999999999865 5678999886543 3356899987533334 5889998765433 3455666777
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 103 ~ 103 (378)
T KOG1345|consen 103 F 103 (378)
T ss_pred c
Confidence 5
No 427
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=93.18 E-value=0.037 Score=44.15 Aligned_cols=31 Identities=29% Similarity=0.432 Sum_probs=28.1
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~ 357 (399)
.+.|+.|+.|+||+|.+++|+.||||..+..
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~ 46 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG 46 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchH
Confidence 4689999999999999999999999998664
No 428
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=93.18 E-value=0.17 Score=42.58 Aligned_cols=68 Identities=18% Similarity=0.165 Sum_probs=47.1
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCcc-ceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLV-RLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~Ey 399 (399)
+.|+.|.++.||+.... +..+++|....... ....+..|...+..+.+.+++ ++++.. ....++||||
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~ 72 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEF 72 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEe
Confidence 56889999999998874 77899998754421 223567888888888665554 444432 3345788886
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.92 E-value=0.043 Score=58.54 Aligned_cols=76 Identities=21% Similarity=0.384 Sum_probs=46.4
Q ss_pred cCCCcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeEEEEE
Q 044262 321 TNNFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ---HRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 321 ~~~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 397 (399)
.+.|.+...||+|+||+||+|.-.+|+.||+|.-+....- +|--=.+++.+|+ -+-|+++..+..-.+.-+||+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence 3456778999999999999999888999999987654321 2222223333333 122333333333345556666
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 774 ey 775 (974)
T KOG1166|consen 774 EY 775 (974)
T ss_pred ec
Confidence 65
No 430
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=92.28 E-value=0.012 Score=57.39 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=59.3
Q ss_pred CCCcccCcccccCceEEEEEEEcCC-cEEEEEEecCC---ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 322 NNFSTDNKLGQGGFGAVYKGRLSHG-QEIAVKRLSKN---SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 322 ~~~~~~~~iG~G~fG~Vykg~~~~g-~~vavK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
.++.....||-|+||.|=....+.. ...|+|.+++. .....+....|-.+|-+.+.+.||+|+--+.+....|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 3455567899999999988777543 34788888764 3444567889999999999999999988777777777776
Q ss_pred e
Q 044262 398 E 398 (399)
Q Consensus 398 E 398 (399)
|
T Consensus 500 E 500 (732)
T KOG0614|consen 500 E 500 (732)
T ss_pred H
Confidence 6
No 431
>PF15102 TMEM154: TMEM154 protein family
Probab=92.07 E-value=0.53 Score=38.34 Aligned_cols=15 Identities=7% Similarity=0.514 Sum_probs=7.7
Q ss_pred ceEEEeehHHHHHHH
Q 044262 264 GTVIIIVVSTSIFII 278 (399)
Q Consensus 264 ~~ii~ivv~~~~~~l 278 (399)
..+++++++.+++++
T Consensus 56 efiLmIlIP~VLLvl 70 (146)
T PF15102_consen 56 EFILMILIPLVLLVL 70 (146)
T ss_pred ceEEEEeHHHHHHHH
Confidence 346666666444433
No 432
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=92.03 E-value=0.064 Score=42.54 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=15.7
Q ss_pred ceEEEeehHHHHHHHHHHHHHhhhhhheecc
Q 044262 264 GTVIIIVVSTSIFIIALVALVTCVFLRRRKQ 294 (399)
Q Consensus 264 ~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r~ 294 (399)
..+++|++++++.++.++++++++++|++|+
T Consensus 64 ~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 64 PAIIGIIFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred cceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455566666655555555554555444443
No 433
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=91.94 E-value=0.27 Score=41.88 Aligned_cols=55 Identities=22% Similarity=0.378 Sum_probs=41.6
Q ss_pred cccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccc
Q 044262 325 STDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVR 382 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~ 382 (399)
...+.|++|.+|.||.|.+ .|..+|+|.-...+ ....+..|.+++..+.-.++..
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p 79 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW-RGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTP 79 (201)
T ss_pred hhhhhhhcccccEEEEeec-cCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCc
Confidence 3457899999999999999 45688998765433 3457889999888877655543
No 434
>PTZ00382 Variant-specific surface protein (VSP); Provisional
Probab=91.37 E-value=0.23 Score=37.85 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=17.6
Q ss_pred ccCceEEEeehHHHHHHHHHHHHHhhhhhhee
Q 044262 261 ISSGTVIIIVVSTSIFIIALVALVTCVFLRRR 292 (399)
Q Consensus 261 ~~~~~ii~ivv~~~~~~lvlv~l~~~~~~~r~ 292 (399)
.+...+..+++++++++.+++.++.||+.+|+
T Consensus 63 ls~gaiagi~vg~~~~v~~lv~~l~w~f~~r~ 94 (96)
T PTZ00382 63 LSTGAIAGISVAVVAVVGGLVGFLCWWFVCRG 94 (96)
T ss_pred cccccEEEEEeehhhHHHHHHHHHhheeEEee
Confidence 34456777777666555555545445544443
No 435
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=91.23 E-value=0.29 Score=49.68 Aligned_cols=55 Identities=20% Similarity=0.189 Sum_probs=44.3
Q ss_pred cCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEe
Q 044262 344 SHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 344 ~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E 398 (399)
.++.+|.|...+...........+-++.|+.++||||++++........+|||+|
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence 3578888888876655333446677788999999999999999888889999988
No 436
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=88.90 E-value=0.098 Score=51.39 Aligned_cols=71 Identities=27% Similarity=0.461 Sum_probs=56.1
Q ss_pred hcCCCcccCcccccCceEEEEEEEcCC-cEEEEEEecCC-ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 044262 320 ATNNFSTDNKLGQGGFGAVYKGRLSHG-QEIAVKRLSKN-SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG 390 (399)
Q Consensus 320 ~~~~~~~~~~iG~G~fG~Vykg~~~~g-~~vavK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 390 (399)
...+|.....+|.|+||.|+.+....+ -..|||+|... ........++|+..+.++-|++++++.-.+..+
T Consensus 47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~ 119 (516)
T KOG1033|consen 47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER 119 (516)
T ss_pred hhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence 346788889999999999999887654 47899998654 334455688899999999999999988766554
No 437
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=87.17 E-value=0.17 Score=46.83 Aligned_cols=74 Identities=23% Similarity=0.302 Sum_probs=49.0
Q ss_pred cccCcccccCceEEEEEEE-cCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCCCCCccceeEEEEeC------CeEEE
Q 044262 325 STDNKLGQGGFGAVYKGRL-SHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQHRNLVRLLGFSFEG------TERLL 395 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~-~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~l 395 (399)
.....+|.|.= .|-.+.- -.++.|++|++... .....+...+|..+|..+.|+||++++.++... .+.++
T Consensus 20 ~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~ 98 (369)
T KOG0665|consen 20 VNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYL 98 (369)
T ss_pred eeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHH
Confidence 33455566654 2322221 13678999987543 233455678999999999999999999988653 23577
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
||||
T Consensus 99 v~e~ 102 (369)
T KOG0665|consen 99 VMEL 102 (369)
T ss_pred HHHh
Confidence 7765
No 438
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=85.36 E-value=0.45 Score=49.38 Aligned_cols=32 Identities=28% Similarity=0.535 Sum_probs=25.8
Q ss_pred cChhhHHhhcCCCcccCcccccCceEEEEEEEc
Q 044262 312 FDFSTIRDATNNFSTDNKLGQGGFGAVYKGRLS 344 (399)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~iG~G~fG~Vykg~~~ 344 (399)
+-.++++..++ +...+.||+|+||.||.|.-+
T Consensus 985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen 985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred CChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence 44567777776 788899999999999998753
No 439
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=84.18 E-value=1.4 Score=43.86 Aligned_cols=64 Identities=22% Similarity=0.282 Sum_probs=45.9
Q ss_pred eEEEEEEEc-CCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeEEEEEeC
Q 044262 336 GAVYKGRLS-HGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNLVRLLGFSFE----GTERLLIYEF 399 (399)
Q Consensus 336 G~Vykg~~~-~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~Ey 399 (399)
-..||+..+ +|..+..|+++....+....-..-++.++++.|.|+|+|..++.. ...+.|||+|
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDY 358 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDY 358 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEec
Confidence 456788764 588899999954433333234455678899999999999988763 3457889887
No 440
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=83.31 E-value=1.2 Score=44.91 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=28.3
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~ 357 (399)
.+.|+.++-|+||+|++++|+.||||.+++.
T Consensus 130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPg 160 (517)
T COG0661 130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPG 160 (517)
T ss_pred CCchhhhhHhhheeEEecCCCEEEEEecCCC
Confidence 3789999999999999999999999999765
No 441
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=83.19 E-value=2.7 Score=36.84 Aligned_cols=66 Identities=24% Similarity=0.308 Sum_probs=48.2
Q ss_pred CCCcccCcccccCc-eEEEEEEEcCCcEEEEEEecCC---C---------h---------hhHHHHHHHHHHHhcC---C
Q 044262 322 NNFSTDNKLGQGGF-GAVYKGRLSHGQEIAVKRLSKN---S---------V---------QGELEFKNEVLLVARL---Q 376 (399)
Q Consensus 322 ~~~~~~~~iG~G~f-G~Vykg~~~~g~~vavK~l~~~---~---------~---------~~~~~f~~E~~~l~~l---~ 376 (399)
..|+..+.||.|.- |.|||..+ +|..+|+|..... . . .....|..|.+...+| .
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 45667789999999 99999999 6789999993221 0 0 1123588899877766 4
Q ss_pred CCCc--cceeEEEE
Q 044262 377 HRNL--VRLLGFSF 388 (399)
Q Consensus 377 H~ni--v~l~g~~~ 388 (399)
+.++ |+..|+..
T Consensus 116 ~e~~~Avkc~Gyl~ 129 (207)
T PF13095_consen 116 REGLWAVKCHGYLL 129 (207)
T ss_pred ccCceEEEeeEEEE
Confidence 5566 88888874
No 442
>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein. gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.
Probab=81.65 E-value=0.45 Score=46.84 Aligned_cols=12 Identities=25% Similarity=0.669 Sum_probs=6.5
Q ss_pred eccCCCCChHhH
Q 044262 180 MQCTPDISQSDC 191 (399)
Q Consensus 180 ~qC~~dl~~~~C 191 (399)
..|.++-.+.+|
T Consensus 239 ~~C~~~~~~~~C 250 (439)
T PF02480_consen 239 ANCSPSGWPRRC 250 (439)
T ss_dssp EEEBTTC-TTTT
T ss_pred cCCCCCCCcCCC
Confidence 556666555555
No 443
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=81.56 E-value=7.1 Score=34.13 Aligned_cols=72 Identities=18% Similarity=0.266 Sum_probs=50.9
Q ss_pred cccCcccccCceEEEEEEEcCCcEEEEEEecCCC----------------hhhHHHHHHHHHHHhcCC------CCCccc
Q 044262 325 STDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS----------------VQGELEFKNEVLLVARLQ------HRNLVR 382 (399)
Q Consensus 325 ~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~----------------~~~~~~f~~E~~~l~~l~------H~niv~ 382 (399)
.....||+|+.-.+|.- ++.....||.+.... ....+++.+|+.-...+. +.+|.+
T Consensus 4 ~~~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r 81 (199)
T PF10707_consen 4 SESDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR 81 (199)
T ss_pred CCCcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence 34578999999999953 445567788776544 122346677765544443 789999
Q ss_pred eeEEEEeCCeEEEEEe
Q 044262 383 LLGFSFEGTERLLIYE 398 (399)
Q Consensus 383 l~g~~~~~~~~~lv~E 398 (399)
++|+......+-+|+|
T Consensus 82 ~~G~veT~~G~Glv~e 97 (199)
T PF10707_consen 82 FYGFVETNLGLGLVVE 97 (199)
T ss_pred EeEEEecCCceEEEEE
Confidence 9999988877888877
No 444
>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function.
Probab=78.09 E-value=2.9 Score=38.16 Aligned_cols=8 Identities=25% Similarity=0.372 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 044262 29 NRDLFLSS 36 (399)
Q Consensus 29 ~l~~ll~~ 36 (399)
.|+.+|.+
T Consensus 12 ~LD~~lqd 19 (278)
T PF06697_consen 12 SLDALLQD 19 (278)
T ss_pred HHHHHHHH
Confidence 34444333
No 445
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=74.86 E-value=0.95 Score=31.18 Aligned_cols=7 Identities=0% Similarity=0.183 Sum_probs=0.0
Q ss_pred EeehHHH
Q 044262 268 IIVVSTS 274 (399)
Q Consensus 268 ~ivv~~~ 274 (399)
.++++++
T Consensus 13 avIaG~V 19 (64)
T PF01034_consen 13 AVIAGGV 19 (64)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 3333333
No 446
>PLN02876 acyl-CoA dehydrogenase
Probab=74.34 E-value=8.5 Score=41.56 Aligned_cols=73 Identities=12% Similarity=0.301 Sum_probs=50.1
Q ss_pred cCcccccCceEEEEEEEcCC---cEEEEEEecCCC-hhhHHHHHHHHHHHhcCC-CCCc--cceeEEEEeC---CeEEEE
Q 044262 327 DNKLGQGGFGAVYKGRLSHG---QEIAVKRLSKNS-VQGELEFKNEVLLVARLQ-HRNL--VRLLGFSFEG---TERLLI 396 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g---~~vavK~l~~~~-~~~~~~f~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~~~lv 396 (399)
.+.++.|.++.+|+-...++ ..+++|+..... ......+.+|.++|..+. |.++ .+.++++.+. ...++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 35678899999998776543 356666654322 123346889999999885 6665 6777777553 357899
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 123 ME~ 125 (822)
T PLN02876 123 MEY 125 (822)
T ss_pred EEe
Confidence 996
No 447
>PRK10593 hypothetical protein; Provisional
Probab=73.35 E-value=14 Score=34.55 Aligned_cols=73 Identities=14% Similarity=0.062 Sum_probs=49.9
Q ss_pred CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCC---CCccceeEEEEe---CCeEEEEE
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQH---RNLVRLLGFSFE---GTERLLIY 397 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H---~niv~l~g~~~~---~~~~~lv~ 397 (399)
+...+.||.|..+.||+-...++ .+.+|..+... ....|..|.+.|..+.. -.+.+.++.+.. .+..+|||
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 34457899999999998776555 35566643311 22478899998887753 256677777643 35589999
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
|+
T Consensus 93 E~ 94 (297)
T PRK10593 93 ER 94 (297)
T ss_pred ec
Confidence 86
No 448
>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein).
Probab=69.90 E-value=4.7 Score=39.33 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=22.7
Q ss_pred cccCceEEEeehHHHHHHHHHHHHHhhhhhhee
Q 044262 260 SISSGTVIIIVVSTSIFIIALVALVTCVFLRRR 292 (399)
Q Consensus 260 ~~~~~~ii~ivv~~~~~~lvlv~l~~~~~~~r~ 292 (399)
..+.+.|..|.|++++++-.||.|+.|||..|.
T Consensus 363 ~LstgaIaGIsvavvvvVgglvGfLcWwf~crg 395 (397)
T PF03302_consen 363 GLSTGAIAGISVAVVVVVGGLVGFLCWWFICRG 395 (397)
T ss_pred cccccceeeeeehhHHHHHHHHHHHhhheeecc
Confidence 456677888888777777666666656665544
No 449
>PF13908 Shisa: Wnt and FGF inhibitory regulator
Probab=68.70 E-value=8.3 Score=33.00 Aligned_cols=6 Identities=33% Similarity=0.971 Sum_probs=2.6
Q ss_pred cccccc
Q 044262 219 CIFRWE 224 (399)
Q Consensus 219 C~~r~~ 224 (399)
|.+||-
T Consensus 33 C~~ryC 38 (179)
T PF13908_consen 33 CSLRYC 38 (179)
T ss_pred ccCcch
Confidence 444443
No 450
>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]. In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.
Probab=68.44 E-value=8.8 Score=39.06 Aligned_cols=29 Identities=10% Similarity=-0.035 Sum_probs=21.5
Q ss_pred ceEEEEEEccCCCChhhHHHHHHHHHHHH
Q 044262 57 DAVYGLALCRGDSTPESCASCLNFTVRDM 85 (399)
Q Consensus 57 ~~vygl~~C~~d~~~~~C~~Cl~~a~~~~ 85 (399)
+-+|+.--=++-|+.++=+.=|.......
T Consensus 78 ~i~~aVr~~~~~LnGt~~S~lL~~Ls~~~ 106 (684)
T PF12877_consen 78 SITYAVRNGSGFLNGTEVSELLRQLSAVE 106 (684)
T ss_pred EEEEEEecCceeeccHHHHHHHHhhhhhh
Confidence 56899999899999888776665554444
No 451
>PF15345 TMEM51: Transmembrane protein 51
Probab=67.61 E-value=12 Score=33.01 Aligned_cols=26 Identities=12% Similarity=0.191 Sum_probs=11.0
Q ss_pred cCceEEEeehHHHHHHHHHHHHHhhhh
Q 044262 262 SSGTVIIIVVSTSIFIIALVALVTCVF 288 (399)
Q Consensus 262 ~~~~ii~ivv~~~~~~lvlv~l~~~~~ 288 (399)
+...+..++|++ +++++++.+++.+.
T Consensus 56 Kt~SVAyVLVG~-Gv~LLLLSICL~IR 81 (233)
T PF15345_consen 56 KTFSVAYVLVGS-GVALLLLSICLSIR 81 (233)
T ss_pred eeEEEEEehhhH-HHHHHHHHHHHHHH
Confidence 333344444433 44444445543343
No 452
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=67.33 E-value=2 Score=39.96 Aligned_cols=14 Identities=0% Similarity=0.078 Sum_probs=7.4
Q ss_pred HHHHHHHHHhhhcc
Q 044262 28 KNRDLFLSSLASNV 41 (399)
Q Consensus 28 ~~l~~ll~~l~~~a 41 (399)
.-+..+++....++
T Consensus 35 PeMK~Vme~F~rqT 48 (299)
T PF02009_consen 35 PEMKSVMENFDRQT 48 (299)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555566555443
No 453
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=67.15 E-value=1.8 Score=39.95 Aligned_cols=10 Identities=20% Similarity=0.743 Sum_probs=0.0
Q ss_pred HHHHHHHhhh
Q 044262 194 CLRQSMADLQ 203 (399)
Q Consensus 194 Cl~~a~~~~~ 203 (399)
|-...+..+.
T Consensus 64 CP~eeI~~L~ 73 (290)
T PF05454_consen 64 CPKEEIEKLR 73 (290)
T ss_dssp ----------
T ss_pred CCHHHHHHHH
Confidence 3344444443
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=67.15 E-value=20 Score=33.01 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=47.0
Q ss_pred ccCcccccCceEEEEEEEcCCcEEEEEEecCCC----------------------hhhHHHHHHHHHHHhcCCCC--Ccc
Q 044262 326 TDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS----------------------VQGELEFKNEVLLVARLQHR--NLV 381 (399)
Q Consensus 326 ~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~----------------------~~~~~~f~~E~~~l~~l~H~--niv 381 (399)
..+.||.|.=+.||.|..+.|.+++||.=+... .-......+|.+.|..|... .+-
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 468999999999999999989999999432110 00123457788888888644 444
Q ss_pred ceeEEEEeCCeEEEEEeC
Q 044262 382 RLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 382 ~l~g~~~~~~~~~lv~Ey 399 (399)
+.+++ +.-.+||||
T Consensus 175 ~P~~~----nRHaVvMe~ 188 (304)
T COG0478 175 KPIAW----NRHAVVMEY 188 (304)
T ss_pred Ccccc----ccceeeeeh
Confidence 44433 345667765
No 455
>PF01299 Lamp: Lysosome-associated membrane glycoprotein (Lamp); InterPro: IPR002000 Lysosome-associated membrane glycoproteins (lamp) [] are integral membrane proteins, specific to lysosomes, and whose exact biological function is not yet clear. Structurally, the lamp proteins consist of two internally homologous lysosome-luminal domains separated by a proline-rich hinge region; at the C-terminal extremity there is a transmembrane region (TM) followed by a very short cytoplasmic tail (C). In each of the duplicated domains, there are two conserved disulphide bonds. This structure is schematically represented in the figure below. +-----+ +-----+ +-----+ +-----+ | | | | | | | | xCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxxxCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxx +--------------------------++Hinge++--------------------------++TM++C+ In mammals, there are two closely related types of lamp: lamp-1 and lamp-2, which form major components of the lysosome membrane. In chicken lamp-1 is known as LEP100. Also included in this entry is the macrophage protein CD68 (or macrosialin) [] is a heavily glycosylated integral membrane protein whose structure consists of a mucin-like domain followed by a proline-rich hinge; a single lamp-like domain; a transmembrane region and a short cytoplasmic tail. Similar to CD68, mammalian lamp-3, which is expressed in lymphoid organs, dendritic cells and in lung, contains all the C-terminal regions but lacks the N-terminal lamp-like region []. In a lamp-family protein from nematodes [] only the part C-terminal to the hinge is conserved. ; GO: 0016020 membrane
Probab=67.08 E-value=2.3 Score=39.98 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=18.1
Q ss_pred ceEEEeehHHHHHHHHHHHHHhhhhhheecc
Q 044262 264 GTVIIIVVSTSIFIIALVALVTCVFLRRRKQ 294 (399)
Q Consensus 264 ~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r~ 294 (399)
..++.|+|+++++++++++++.+++.|||.+
T Consensus 270 ~~~vPIaVG~~La~lvlivLiaYli~Rrr~~ 300 (306)
T PF01299_consen 270 SDLVPIAVGAALAGLVLIVLIAYLIGRRRSR 300 (306)
T ss_pred cchHHHHHHHHHHHHHHHHHHhheeEecccc
Confidence 3455566666666666666665555554443
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=66.17 E-value=17 Score=32.38 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=44.7
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCCc--cceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRNL--VRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~~~~~lv~Ey 399 (399)
..||+|.-+.||+. .+...++|...... ......+|.+++..+..-.+ .+.+++....+...+|||+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~ 75 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYEL 75 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeee
Confidence 57899999999983 24456677765432 23356788888887754333 4556666566667788875
No 457
>PF14610 DUF4448: Protein of unknown function (DUF4448)
Probab=65.94 E-value=11 Score=32.55 Aligned_cols=21 Identities=14% Similarity=0.362 Sum_probs=11.3
Q ss_pred CceEEEeehHHHHHHHHHHHH
Q 044262 263 SGTVIIIVVSTSIFIIALVAL 283 (399)
Q Consensus 263 ~~~ii~ivv~~~~~~lvlv~l 283 (399)
....+++++.+++++++++++
T Consensus 156 ~~~~laI~lPvvv~~~~~~~~ 176 (189)
T PF14610_consen 156 GKYALAIALPVVVVVLALIMY 176 (189)
T ss_pred cceeEEEEccHHHHHHHHHHH
Confidence 344566666666555444444
No 458
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=63.74 E-value=27 Score=30.48 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=43.2
Q ss_pred CcccccCceEEEEEEEcC-------CcEEEEEEecCC-------------C---------hhhHHH----HHHHHHHHhc
Q 044262 328 NKLGQGGFGAVYKGRLSH-------GQEIAVKRLSKN-------------S---------VQGELE----FKNEVLLVAR 374 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~-------g~~vavK~l~~~-------------~---------~~~~~~----f~~E~~~l~~ 374 (399)
..||.|.=+.||.|.-.+ +..+|||..+.. . ...... ..+|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999997543 478999977421 0 000112 2378888888
Q ss_pred CCC--CCccceeEEEEeCCeEEEEEeC
Q 044262 375 LQH--RNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 375 l~H--~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+.. -++-+++++ ..-+|||||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~ 105 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSF 105 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEE
Confidence 754 344455543 456788886
No 459
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=63.10 E-value=23 Score=30.81 Aligned_cols=69 Identities=17% Similarity=0.256 Sum_probs=46.1
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCCCCC--ccceeEEEEeC---CeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQHRN--LVRLLGFSFEG---TERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~---~~~~lv~Ey 399 (399)
+.|+.|..+.||+....+ ..+++|..... .......+|..++..+.... +.+++...... ...+++|||
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~ 76 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY 76 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence 568899999999999866 68999987543 34456778888887775333 45666644332 235677764
No 460
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=62.78 E-value=34 Score=33.44 Aligned_cols=70 Identities=11% Similarity=0.133 Sum_probs=46.1
Q ss_pred CcccccCceEEEEEEEcCC-cEEEEEEecCC-----C--hhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeEEEE
Q 044262 328 NKLGQGGFGAVYKGRLSHG-QEIAVKRLSKN-----S--VQGELEFKNEVLLVARLQ---HRNLVRLLGFSFEGTERLLI 396 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g-~~vavK~l~~~-----~--~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv 396 (399)
+.||.|.+..||+....+| +.+.||.-... . ....+.+..|.+.|..+. ...+.+++.+ ..+.-++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 5789999999999998776 48999974321 0 112345666777776652 2345566655 33446888
Q ss_pred EeC
Q 044262 397 YEF 399 (399)
Q Consensus 397 ~Ey 399 (399)
|||
T Consensus 110 ME~ 112 (401)
T PRK09550 110 MED 112 (401)
T ss_pred Eec
Confidence 886
No 461
>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains. They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].
Probab=61.48 E-value=9 Score=33.42 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=9.2
Q ss_pred ceEEEeehHHHHHHHHHHHH
Q 044262 264 GTVIIIVVSTSIFIIALVAL 283 (399)
Q Consensus 264 ~~ii~ivv~~~~~~lvlv~l 283 (399)
.++++++.+++.+++++++.
T Consensus 38 ~I~iaiVAG~~tVILVI~i~ 57 (221)
T PF08374_consen 38 KIMIAIVAGIMTVILVIFIV 57 (221)
T ss_pred eeeeeeecchhhhHHHHHHH
Confidence 34444444544444444433
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=60.04 E-value=4.8 Score=40.39 Aligned_cols=76 Identities=24% Similarity=0.228 Sum_probs=53.6
Q ss_pred CcccCcccc--cCceEEEEEEE--c-CCcEEEEEEecCC--ChhhHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeEEE
Q 044262 324 FSTDNKLGQ--GGFGAVYKGRL--S-HGQEIAVKRLSKN--SVQGELEFKNEVLLVARL-QHRNLVRLLGFSFEGTERLL 395 (399)
Q Consensus 324 ~~~~~~iG~--G~fG~Vykg~~--~-~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 395 (399)
+.....+|. |.+|.+|++.. . .+..+|+|.-+.. .......=.+|.....++ .|+|.|+....+...+.+++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 445678899 99999999987 3 3677899874332 222233345555555555 59999998888888888888
Q ss_pred EEeC
Q 044262 396 IYEF 399 (399)
Q Consensus 396 v~Ey 399 (399)
-+|+
T Consensus 196 qtE~ 199 (524)
T KOG0601|consen 196 QTEL 199 (524)
T ss_pred eecc
Confidence 8774
No 463
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=58.47 E-value=6.8 Score=35.68 Aligned_cols=11 Identities=9% Similarity=0.145 Sum_probs=4.7
Q ss_pred HHHHHHHHhhh
Q 044262 29 NRDLFLSSLAS 39 (399)
Q Consensus 29 ~l~~ll~~l~~ 39 (399)
-+..+++.+..
T Consensus 59 EmK~iid~~n~ 69 (295)
T TIGR01478 59 ELKEIIDKLNE 69 (295)
T ss_pred HHHHHHHHHhH
Confidence 34444444443
No 464
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=57.35 E-value=45 Score=28.79 Aligned_cols=59 Identities=20% Similarity=0.268 Sum_probs=36.9
Q ss_pred EEEEEEEcCCcEEEEEEecCCCh--------------------------hhHHHHHHHHHHHhcCCCCC--ccceeEEEE
Q 044262 337 AVYKGRLSHGQEIAVKRLSKNSV--------------------------QGELEFKNEVLLVARLQHRN--LVRLLGFSF 388 (399)
Q Consensus 337 ~Vykg~~~~g~~vavK~l~~~~~--------------------------~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~ 388 (399)
.||.|.-.+|..+|||..+.... .......+|.+.|.++..-+ +-+++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 38999988899999998743200 00134678999999997664 4455433
Q ss_pred eCCeEEEEEeC
Q 044262 389 EGTERLLIYEF 399 (399)
Q Consensus 389 ~~~~~~lv~Ey 399 (399)
..-.|||||
T Consensus 79 --~~~~ivME~ 87 (188)
T PF01163_consen 79 --NRNVIVMEY 87 (188)
T ss_dssp --ETTEEEEE-
T ss_pred --eCCEEEEEe
Confidence 234789987
No 465
>PTZ00370 STEVOR; Provisional
Probab=56.96 E-value=7.5 Score=35.50 Aligned_cols=11 Identities=0% Similarity=0.108 Sum_probs=4.6
Q ss_pred HHHHHHHHhhh
Q 044262 29 NRDLFLSSLAS 39 (399)
Q Consensus 29 ~l~~ll~~l~~ 39 (399)
-+..+++.+..
T Consensus 58 emK~i~d~~n~ 68 (296)
T PTZ00370 58 ELKEIIDKMNE 68 (296)
T ss_pred HHHHHHHHHhH
Confidence 34444444443
No 466
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=56.66 E-value=20 Score=33.24 Aligned_cols=25 Identities=24% Similarity=0.448 Sum_probs=12.8
Q ss_pred CcccCceEEEeehHHHHHHHHHHHH
Q 044262 259 NSISSGTVIIIVVSTSIFIIALVAL 283 (399)
Q Consensus 259 ~~~~~~~ii~ivv~~~~~~lvlv~l 283 (399)
++...+.+++|.+++.+.+++++++
T Consensus 222 ~~l~~G~VVlIslAiALG~v~ll~l 246 (281)
T PF12768_consen 222 KKLSRGFVVLISLAIALGTVFLLVL 246 (281)
T ss_pred ccccceEEEEEehHHHHHHHHHHHH
Confidence 4555556666665554444433333
No 467
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=55.74 E-value=18 Score=33.52 Aligned_cols=52 Identities=27% Similarity=0.393 Sum_probs=37.7
Q ss_pred CcccCcccccCceEEEEEEEcC-CcEEEEEEecCC---ChhhHHHHHHHHHHHhcC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH-GQEIAVKRLSKN---SVQGELEFKNEVLLVARL 375 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~-g~~vavK~l~~~---~~~~~~~f~~E~~~l~~l 375 (399)
+...+.||.|.|+.||.++..+ ++.+|||..... .....+++.+|.-....+
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~ 69 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLF 69 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGS
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhh
Confidence 4456899999999999999865 789999987433 223456677777555554
No 468
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=55.66 E-value=8.3 Score=28.31 Aligned_cols=22 Identities=23% Similarity=0.277 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHhhhhhheecc
Q 044262 273 TSIFIIALVALVTCVFLRRRKQ 294 (399)
Q Consensus 273 ~~~~~lvlv~l~~~~~~~r~r~ 294 (399)
++++++++++++++.++.+|+|
T Consensus 39 vI~~iFil~VilwfvCC~kRkr 60 (94)
T PF05393_consen 39 VICGIFILLVILWFVCCKKRKR 60 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 3333434444444444333333
No 469
>PTZ00046 rifin; Provisional
Probab=55.30 E-value=5.2 Score=37.93 Aligned_cols=10 Identities=20% Similarity=0.365 Sum_probs=4.5
Q ss_pred HHHHHHhhcC
Q 044262 80 FTVRDMMKNC 89 (399)
Q Consensus 80 ~a~~~~~~~C 89 (399)
...+.+-+.|
T Consensus 131 SlADKvEK~C 140 (358)
T PTZ00046 131 SLADKVEKGC 140 (358)
T ss_pred hHHHHHHHHH
Confidence 3444454443
No 470
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=54.93 E-value=20 Score=36.40 Aligned_cols=31 Identities=23% Similarity=0.461 Sum_probs=27.9
Q ss_pred cCcccccCceEEEEEEEcCCcEEEEEEecCC
Q 044262 327 DNKLGQGGFGAVYKGRLSHGQEIAVKRLSKN 357 (399)
Q Consensus 327 ~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~ 357 (399)
.+.||.-..|+||++.+++|+.||||..++.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~ 196 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPG 196 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence 4789999999999999999999999988654
No 471
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=54.75 E-value=5.3 Score=37.73 Aligned_cols=17 Identities=12% Similarity=-0.005 Sum_probs=7.4
Q ss_pred HHHHHHhhc---CCCCccEE
Q 044262 80 FTVRDMMKN---CPNQKEAI 96 (399)
Q Consensus 80 ~a~~~~~~~---C~~~~~~~ 96 (399)
...+.+-+. |...-||.
T Consensus 134 SlADKvEK~CLkCg~~LGgg 153 (353)
T TIGR01477 134 SLADKVEKGCLRCGCGLGGG 153 (353)
T ss_pred hHHHHHHHhHHhcCCccCcc
Confidence 333444443 45445533
No 472
>PF14991 MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=52.48 E-value=4.1 Score=31.53 Aligned_cols=19 Identities=32% Similarity=0.759 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhhhee
Q 044262 274 SIFIIALVALVTCVFLRRR 292 (399)
Q Consensus 274 ~~~~lvlv~l~~~~~~~r~ 292 (399)
.++++.+++++.||+++||
T Consensus 32 L~VILgiLLliGCWYckRR 50 (118)
T PF14991_consen 32 LIVILGILLLIGCWYCKRR 50 (118)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHHhheeeeec
Confidence 3334444444445555544
No 473
>PHA03265 envelope glycoprotein D; Provisional
Probab=52.45 E-value=10 Score=35.61 Aligned_cols=29 Identities=38% Similarity=0.462 Sum_probs=12.1
Q ss_pred eEEEeehHHHHHHHHHHHHHhhhhhheec
Q 044262 265 TVIIIVVSTSIFIIALVALVTCVFLRRRK 293 (399)
Q Consensus 265 ~ii~ivv~~~~~~lvlv~l~~~~~~~r~r 293 (399)
..+.+++++.++.++++..++++++||||
T Consensus 348 ~~~g~~ig~~i~glv~vg~il~~~~rr~k 376 (402)
T PHA03265 348 TFVGISVGLGIAGLVLVGVILYVCLRRKK 376 (402)
T ss_pred cccceEEccchhhhhhhhHHHHHHhhhhh
Confidence 33444444333333344444344444443
No 474
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=52.11 E-value=43 Score=29.82 Aligned_cols=66 Identities=12% Similarity=0.163 Sum_probs=41.6
Q ss_pred ccccCc-eEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262 330 LGQGGF-GAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 330 iG~G~f-G~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
|-.|.. ..||+.... +..+.+|...... ..+..+|++++..+. +--+.+++++....+..+|||||
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 73 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSA 73 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEe
Confidence 334444 678888764 4677888765432 235677888877763 33344666666555567888885
No 475
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=49.01 E-value=15 Score=40.27 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=43.1
Q ss_pred CCcccCcccccCceEEEEEEEcCCcEEEEEEecCCC-hhhHHHHHHHHHH--HhcCCCCCcccee
Q 044262 323 NFSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNS-VQGELEFKNEVLL--VARLQHRNLVRLL 384 (399)
Q Consensus 323 ~~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~-~~~~~~f~~E~~~--l~~l~H~niv~l~ 384 (399)
++...+.||.+.|=+|.+++.++|. |.||.+-+.. .-..+.|.++++- ...++|||.+.+.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfq 87 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQ 87 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchH
Confidence 4566789999999999999987776 8899885543 2233444444432 4556899998764
No 476
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=48.97 E-value=13 Score=29.92 Aligned_cols=7 Identities=0% Similarity=0.430 Sum_probs=3.2
Q ss_pred eeccccc
Q 044262 291 RRKQKQD 297 (399)
Q Consensus 291 r~r~~~~ 297 (399)
++||+++
T Consensus 22 ~~rRR~r 28 (130)
T PF12273_consen 22 HNRRRRR 28 (130)
T ss_pred HHHHHhh
Confidence 3455544
No 477
>PF06809 NPDC1: Neural proliferation differentiation control-1 protein (NPDC1); InterPro: IPR009635 This family consists of several neural proliferation differentiation control-1 (NPDC1) proteins. NPDC1 plays a role in the control of neural cell proliferation and differentiation. It has been suggested that NPDC1 may be involved in the development of several secretion glands. This family also contains the C-terminal region of the Caenorhabditis elegans protein CAB-1 (Q93249 from SWISSPROT) which is known to interact with AEX-3 [].; GO: 0016021 integral to membrane
Probab=48.77 E-value=39 Score=31.43 Aligned_cols=15 Identities=33% Similarity=0.250 Sum_probs=8.1
Q ss_pred HHHHHHHHHHhhhcc
Q 044262 27 GKNRDLFLSSLASNV 41 (399)
Q Consensus 27 ~~~l~~ll~~l~~~a 41 (399)
...|+.||.-|.-.+
T Consensus 13 ~rllr~ll~gl~~~~ 27 (341)
T PF06809_consen 13 LRLLRLLLSGLVLGV 27 (341)
T ss_pred HHHHHHhhhhHHHHH
Confidence 344566666665443
No 478
>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein. gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.
Probab=48.39 E-value=5.9 Score=39.14 Aligned_cols=6 Identities=33% Similarity=0.728 Sum_probs=3.0
Q ss_pred HHHHHH
Q 044262 193 FCLRQS 198 (399)
Q Consensus 193 ~Cl~~a 198 (399)
.||..+
T Consensus 213 ~Cl~P~ 218 (439)
T PF02480_consen 213 ECLHPA 218 (439)
T ss_dssp HHHS-T
T ss_pred cccCCC
Confidence 466655
No 479
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=47.83 E-value=69 Score=29.78 Aligned_cols=72 Identities=18% Similarity=0.279 Sum_probs=45.5
Q ss_pred CcccCcccccCceEEEEEEEcCCcEEEEEEecCCChhhHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeEEEEEeC
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSHGQEIAVKRLSKNSVQGELEFKNEVLLVARLQ---HRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~g~~vavK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
+...+.|+.|....+|+-. .+++.+-||.-.. .....|..|.+-|..|. --.+.+.+++-...+.-+||+||
T Consensus 19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~ 93 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEF 93 (288)
T ss_dssp --EEEEE--SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-
T ss_pred eeeeEecCCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEe
Confidence 3445678889999999876 5678899998752 22336888887777763 34566788877666667999997
No 480
>PHA03281 envelope glycoprotein E; Provisional
Probab=47.22 E-value=63 Score=32.44 Aligned_cols=12 Identities=33% Similarity=0.468 Sum_probs=5.1
Q ss_pred CcccccCceEEE
Q 044262 328 NKLGQGGFGAVY 339 (399)
Q Consensus 328 ~~iG~G~fG~Vy 339 (399)
+.||...-|.-|
T Consensus 622 ~~~~~~~~~~~~ 633 (642)
T PHA03281 622 NAIGAECGGSGY 633 (642)
T ss_pred cccccccCCcce
Confidence 455543333333
No 481
>PF15069 FAM163: FAM163 family
Probab=46.10 E-value=24 Score=28.74 Aligned_cols=9 Identities=22% Similarity=0.394 Sum_probs=4.3
Q ss_pred CcEEEEEEe
Q 044262 346 GQEIAVKRL 354 (399)
Q Consensus 346 g~~vavK~l 354 (399)
|+.+..+-+
T Consensus 111 geR~~y~~~ 119 (143)
T PF15069_consen 111 GERISYTPT 119 (143)
T ss_pred Cceecccce
Confidence 455544443
No 482
>COG3889 Predicted solute binding protein [General function prediction only]
Probab=46.04 E-value=28 Score=36.44 Aligned_cols=8 Identities=25% Similarity=0.679 Sum_probs=4.1
Q ss_pred ceEEEecc
Q 044262 175 TIYALMQC 182 (399)
Q Consensus 175 ~vy~l~qC 182 (399)
+||+...=
T Consensus 728 tv~~sl~~ 735 (872)
T COG3889 728 TVYGSLEV 735 (872)
T ss_pred eEEEEEEe
Confidence 55555443
No 483
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=45.92 E-value=76 Score=27.57 Aligned_cols=71 Identities=15% Similarity=0.284 Sum_probs=46.1
Q ss_pred CcccccCceEEEEEEEcCCcEEEEEE-ecCCC--hh-----hHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEEeC
Q 044262 328 NKLGQGGFGAVYKGRLSHGQEIAVKR-LSKNS--VQ-----GELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 328 ~~iG~G~fG~Vykg~~~~g~~vavK~-l~~~~--~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
..+.+|+=..++.+.+ -|.++.+|. +++.- +. ..+.-.+|..+|.+++--.|--..=+..+++...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 4578899999999877 344555664 32221 11 123467899999888655555444455677788899987
No 484
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=45.39 E-value=13 Score=30.10 Aligned_cols=25 Identities=24% Similarity=0.588 Sum_probs=9.8
Q ss_pred eehHHHHHHHHHHHHHhhhhhheecc
Q 044262 269 IVVSTSIFIIALVALVTCVFLRRRKQ 294 (399)
Q Consensus 269 ivv~~~~~~lvlv~l~~~~~~~r~r~ 294 (399)
++++++++++++++++ +++.+|+||
T Consensus 34 ILiaIvVliiiiivli-~lcssRKkK 58 (189)
T PF05568_consen 34 ILIAIVVLIIIIIVLI-YLCSSRKKK 58 (189)
T ss_pred HHHHHHHHHHHHHHHH-HHHhhhhHH
Confidence 3344444444444443 333333333
No 485
>PF15050 SCIMP: SCIMP protein
Probab=44.99 E-value=8.1 Score=30.19 Aligned_cols=10 Identities=10% Similarity=0.348 Sum_probs=4.2
Q ss_pred CCCCCcccee
Q 044262 375 LQHRNLVRLL 384 (399)
Q Consensus 375 l~H~niv~l~ 384 (399)
++|...|...
T Consensus 102 ~r~kk~vsip 111 (133)
T PF15050_consen 102 VRNKKTVSIP 111 (133)
T ss_pred hccceeeccc
Confidence 3444444433
No 486
>TIGR03154 sulfolob_CbsA cytochrome b558/566, subunit A. Members of this protein family are CbsA, one subunit of a highly glycosylated, heterodimeric, mono-heme cytochrome b558/566, found in Sulfolobus acidocaldarius and several other members of the Sulfolobales, a branch of the Crenarchaeota.
Probab=44.60 E-value=29 Score=32.57 Aligned_cols=17 Identities=29% Similarity=0.507 Sum_probs=7.8
Q ss_pred ceEEEeehHHHHHHHHH
Q 044262 264 GTVIIIVVSTSIFIIAL 280 (399)
Q Consensus 264 ~~ii~ivv~~~~~~lvl 280 (399)
..++..+++++++++++
T Consensus 440 tTIlwTVaGVvIAiVAL 456 (465)
T TIGR03154 440 TTLYVTIIGVVIAIVAL 456 (465)
T ss_pred eeEEEEeehhHHHHHHH
Confidence 44555555544444433
No 487
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=43.61 E-value=73 Score=27.78 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=45.6
Q ss_pred ccCcccccCceEEEEEEEcCCcEEEEEE-ecCCC-------hhhHHHHHHHHHHHhcCCCCCccceeEEEEeCCeEEEEE
Q 044262 326 TDNKLGQGGFGAVYKGRLSHGQEIAVKR-LSKNS-------VQGELEFKNEVLLVARLQHRNLVRLLGFSFEGTERLLIY 397 (399)
Q Consensus 326 ~~~~iG~G~fG~Vykg~~~~g~~vavK~-l~~~~-------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 397 (399)
....|-||+-+.|+++.+ .|+...||. +.+.- .-..+...+|++++.+++--.|.-..=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 457888999999999998 456555654 22211 111235678999988876544443333444555566777
Q ss_pred eC
Q 044262 398 EF 399 (399)
Q Consensus 398 Ey 399 (399)
||
T Consensus 90 E~ 91 (229)
T KOG3087|consen 90 EF 91 (229)
T ss_pred Ee
Confidence 75
No 488
>PF04689 S1FA: DNA binding protein S1FA; InterPro: IPR006779 S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix. S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=41.73 E-value=55 Score=22.54 Aligned_cols=30 Identities=17% Similarity=0.480 Sum_probs=14.7
Q ss_pred CcccCceEEEeehHHHHHHHHHHHHHhhhh
Q 044262 259 NSISSGTVIIIVVSTSIFIIALVALVTCVF 288 (399)
Q Consensus 259 ~~~~~~~ii~ivv~~~~~~lvlv~l~~~~~ 288 (399)
+...++.|++++++..++++++-..+++.+
T Consensus 8 KGlnPGlIVLlvV~g~ll~flvGnyvlY~Y 37 (69)
T PF04689_consen 8 KGLNPGLIVLLVVAGLLLVFLVGNYVLYVY 37 (69)
T ss_pred cCCCCCeEEeehHHHHHHHHHHHHHHHHHH
Confidence 334456666666655544444333333333
No 489
>PF15102 TMEM154: TMEM154 protein family
Probab=41.63 E-value=13 Score=30.43 Aligned_cols=7 Identities=14% Similarity=0.026 Sum_probs=2.8
Q ss_pred CceEEEe
Q 044262 263 SGTVIII 269 (399)
Q Consensus 263 ~~~ii~i 269 (399)
...+++-
T Consensus 58 iLmIlIP 64 (146)
T PF15102_consen 58 ILMILIP 64 (146)
T ss_pred EEEEeHH
Confidence 3444443
No 490
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=39.49 E-value=16 Score=29.06 Aligned_cols=32 Identities=6% Similarity=0.061 Sum_probs=17.5
Q ss_pred EEeehHHHHHHHHHHHHHhhhhhheecccccc
Q 044262 267 IIIVVSTSIFIIALVALVTCVFLRRRKQKQDL 298 (399)
Q Consensus 267 i~ivv~~~~~~lvlv~l~~~~~~~r~r~~~~~ 298 (399)
-.++..+++++..++.+++++.+..+|++++.
T Consensus 64 ~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~ 95 (122)
T PF01102_consen 64 PAIIGIIFGVMAGVIGIILLISYCIRRLRKKS 95 (122)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred cceeehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 33334444555556666666777777777763
No 491
>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins. In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].
Probab=38.84 E-value=27 Score=25.32 Aligned_cols=14 Identities=36% Similarity=0.529 Sum_probs=5.4
Q ss_pred HHHHHhhhhhheec
Q 044262 280 LVALVTCVFLRRRK 293 (399)
Q Consensus 280 lv~l~~~~~~~r~r 293 (399)
++++.++++-+.++
T Consensus 49 LIv~~vy~car~r~ 62 (79)
T PF07213_consen 49 LIVLVVYYCARPRR 62 (79)
T ss_pred HHHHHHHhhccccc
Confidence 33333344444333
No 492
>PF05510 Sarcoglycan_2: Sarcoglycan alpha/epsilon; InterPro: IPR008908 Sarcoglycans are a subcomplex of transmembrane proteins which are part of the dystrophin-glycoprotein complex. They are expressed in the skeletal, cardiac and smooth muscle. Although numerous studies have been conducted on the sarcoglycan subcomplex in skeletal and cardiac muscle, the manner of the distribution and localisation of these proteins along the nonjunctional sarcolemma is not clear []. This family contains alpha and epsilon members.; GO: 0016012 sarcoglycan complex
Probab=38.57 E-value=24 Score=34.03 Aligned_cols=11 Identities=27% Similarity=0.193 Sum_probs=7.0
Q ss_pred Ccccccccccc
Q 044262 216 GPSCIFRWEMY 226 (399)
Q Consensus 216 ~~~C~~r~~~~ 226 (399)
-+||.++--..
T Consensus 234 iDWC~f~Lv~~ 244 (386)
T PF05510_consen 234 IDWCNFRLVDL 244 (386)
T ss_pred eeeeeeEEEcc
Confidence 36888876443
No 493
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=37.53 E-value=6.4 Score=39.96 Aligned_cols=71 Identities=31% Similarity=0.414 Sum_probs=0.0
Q ss_pred cccccCceEEE----EEEEcCCcEEEEEEecCC--ChhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEeC
Q 044262 329 KLGQGGFGAVY----KGRLSHGQEIAVKRLSKN--SVQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYEF 399 (399)
Q Consensus 329 ~iG~G~fG~Vy----kg~~~~g~~vavK~l~~~--~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~Ey 399 (399)
++|+|.||.|+ .+....|...|.|.+++. ..........|..++...+ ||-+|++.-.+.....++++++|
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
No 494
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=35.27 E-value=20 Score=27.86 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=0.0
Q ss_pred eEEEeehHHHHHHHHHHHHHhhhhhheeccccc
Q 044262 265 TVIIIVVSTSIFIIALVALVTCVFLRRRKQKQD 297 (399)
Q Consensus 265 ~ii~ivv~~~~~~lvlv~l~~~~~~~r~r~~~~ 297 (399)
+++.+++++.+++++++.++.|...+++++...
T Consensus 1 w~Ll~il~llLll~l~asl~~wr~~~rq~k~~~ 33 (107)
T PF15330_consen 1 WLLLGILALLLLLSLAASLLAWRMKQRQKKAGQ 33 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
No 495
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=34.40 E-value=9.5 Score=39.48 Aligned_cols=76 Identities=20% Similarity=0.258 Sum_probs=0.0
Q ss_pred CcccCcccccCceEEEEEEEcC--CcEEEEEEecCCC--hhhHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeEEEEEe
Q 044262 324 FSTDNKLGQGGFGAVYKGRLSH--GQEIAVKRLSKNS--VQGELEFKNEVLLVARLQ-HRNLVRLLGFSFEGTERLLIYE 398 (399)
Q Consensus 324 ~~~~~~iG~G~fG~Vykg~~~~--g~~vavK~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E 398 (399)
+.....||+|.|+.|-.....+ ...+|+|.+.... ....+....|..+-..+. |+|++++++.....+..+++.|
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~ 101 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLS 101 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccC
Q ss_pred C
Q 044262 399 F 399 (399)
Q Consensus 399 y 399 (399)
|
T Consensus 102 ~ 102 (601)
T KOG0590|consen 102 Y 102 (601)
T ss_pred c
No 496
>PF11857 DUF3377: Domain of unknown function (DUF3377); InterPro: IPR021805 This domain is functionally uncharacterised and found at the C terminus of peptidases belonging to MEROPS peptidase family M10A, membrane-type matrix metallopeptidases (clan MA). ; GO: 0004222 metalloendopeptidase activity
Probab=34.37 E-value=74 Score=22.76 Aligned_cols=35 Identities=11% Similarity=0.288 Sum_probs=0.0
Q ss_pred CCcccCceEEEeehHHHHHHHHHHHHHhhhhhhee
Q 044262 258 GNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRR 292 (399)
Q Consensus 258 ~~~~~~~~ii~ivv~~~~~~lvlv~l~~~~~~~r~ 292 (399)
....+....++++++.++++.+++++..++..+++
T Consensus 23 d~~~~~~~avaVviPl~L~LCiLvl~yai~~fkrk 57 (74)
T PF11857_consen 23 DDGGGTVNAVAVVIPLVLLLCILVLIYAIFQFKRK 57 (74)
T ss_pred ccCCCceeEEEEeHHHHHHHHHHHHHHHhheeeec
No 497
>PHA03283 envelope glycoprotein E; Provisional
Probab=34.09 E-value=50 Score=32.99 Aligned_cols=56 Identities=14% Similarity=0.121 Sum_probs=0.0
Q ss_pred CCCCCCCCCCcccCCCCCcccCceEEEeehHHHHHHHHHHHHHhhhhhheeccccc
Q 044262 242 SPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQD 297 (399)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r~~~~ 297 (399)
+.+...|+++.++..........++..+.+.+.++.++++++++|.+.+.++.+++
T Consensus 376 ~~~~~~p~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~vw~c~~~r~~~~~ 431 (542)
T PHA03283 376 GHGVTTPHPSAATTNELGAWTRHYLAFLLAIICTCAALLVALVVWGCILYRRSNRK 431 (542)
T ss_pred cCCCCCCCCCCCCCCCCCccccccchhHHHHHHHHHHHHHHHhhhheeeehhhcCC
No 498
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=34.01 E-value=39 Score=21.93 Aligned_cols=26 Identities=19% Similarity=0.517 Sum_probs=0.0
Q ss_pred ehHHHHHHHHHHHHHhhhhhheeccc
Q 044262 270 VVSTSIFIIALVALVTCVFLRRRKQK 295 (399)
Q Consensus 270 vv~~~~~~lvlv~l~~~~~~~r~r~~ 295 (399)
.+.+++++++.+.++++.++.++|++
T Consensus 12 ~~~~v~~~~~F~gi~~w~~~~~~k~~ 37 (49)
T PF05545_consen 12 SIGTVLFFVFFIGIVIWAYRPRNKKR 37 (49)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhh
No 499
>PF03229 Alpha_GJ: Alphavirus glycoprotein J; InterPro: IPR004913 The exact function of the herpesvirus glycoprotein J is unknown, but it appears to play a role in the inhibition of apotosis of the host cell [].; GO: 0019050 suppression by virus of host apoptosis
Probab=31.65 E-value=1.1e+02 Score=24.00 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=0.0
Q ss_pred ccccCCCCCCCCCCCCCCCCCCcccCCCCCcccCceEEEeehHHHHHHHHHHHHHhhhhhheeccc
Q 044262 230 GATADSLSPSPLSPPSTTTDTTTTKDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQK 295 (399)
Q Consensus 230 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r~~ 295 (399)
+.......+........++..+...++........-.++-+|+..+.++.+.++....+.+|.+++
T Consensus 48 naTS~~a~st~aat~~~Pa~~sT~a~~sp~ps~p~d~aLp~VIGGLcaL~LaamGA~~LLrR~cRr 113 (126)
T PF03229_consen 48 NATSTDASSTIAATTTEPAETSTQASSSPGPSPPVDFALPLVIGGLCALTLAAMGAGALLRRCCRR 113 (126)
T ss_pred CccccCcccccccCCCCCCCCCCCCCCCCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
No 500
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=30.83 E-value=37 Score=27.08 Aligned_cols=47 Identities=11% Similarity=0.092 Sum_probs=0.0
Q ss_pred cCCCCCcccCceEEEeehHHHHHHHHHHHHHhhhhhheecccccccc
Q 044262 254 KDKGGNSISSGTVIIIVVSTSIFIIALVALVTCVFLRRRKQKQDLTK 300 (399)
Q Consensus 254 ~~~~~~~~~~~~ii~ivv~~~~~~lvlv~l~~~~~~~r~r~~~~~~~ 300 (399)
............+...++.++++.+++...+++++++.||++...+.
T Consensus 89 ~~~~k~n~~t~Yia~~~il~il~~i~is~~~~~~yr~~r~~~~~~~~ 135 (139)
T PHA03099 89 QRSEKPNTTTSYIPSPGIVLVLVGIIITCCLLSVYRFTRRTKLPLQD 135 (139)
T ss_pred eccccccchhhhhhhhHHHHHHHHHHHHHHHHhhheeeecccCchhh
Done!