Query 044265
Match_columns 517
No_of_seqs 378 out of 1914
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 22:49:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 1.6E-73 5.5E-78 633.0 42.9 451 8-516 174-655 (656)
2 2xn4_A Kelch-like protein 2; s 100.0 1.5E-35 5E-40 296.4 28.7 272 25-368 9-298 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 9.9E-36 3.4E-40 299.0 27.5 277 19-367 12-307 (308)
4 3ii7_A Kelch-like protein 7; p 100.0 2.5E-34 8.5E-39 288.0 27.6 266 31-370 11-295 (306)
5 2vpj_A Kelch-like protein 12; 100.0 4.5E-34 1.5E-38 285.2 26.1 269 30-368 13-299 (301)
6 2woz_A Kelch repeat and BTB do 100.0 1.2E-32 4.2E-37 277.5 23.8 263 71-378 26-314 (318)
7 1zgk_A Kelch-like ECH-associat 100.0 5.6E-32 1.9E-36 271.6 28.3 257 90-405 14-288 (308)
8 4asc_A Kelch repeat and BTB do 100.0 7.2E-33 2.5E-37 278.8 20.4 265 70-380 14-306 (315)
9 2xn4_A Kelch-like protein 2; s 100.0 1.1E-31 3.8E-36 268.2 26.1 251 98-405 13-277 (302)
10 3ii7_A Kelch-like protein 7; p 100.0 1.8E-31 6.3E-36 267.1 26.4 250 100-405 11-273 (306)
11 2vpj_A Kelch-like protein 12; 100.0 1.8E-30 6.3E-35 259.0 27.7 248 99-405 13-279 (301)
12 2uvk_A YJHT; unknown function, 100.0 1.3E-30 4.3E-35 266.7 23.8 261 84-382 3-327 (357)
13 2uvk_A YJHT; unknown function, 100.0 1.5E-29 5.2E-34 258.7 25.0 281 15-357 3-352 (357)
14 1k3i_A Galactose oxidase precu 100.0 1.7E-29 5.8E-34 279.7 22.9 293 71-404 168-497 (656)
15 4asc_A Kelch repeat and BTB do 100.0 4.7E-29 1.6E-33 250.9 23.7 249 100-405 4-278 (315)
16 2woz_A Kelch repeat and BTB do 100.0 9.5E-29 3.3E-33 249.0 22.9 251 100-405 15-288 (318)
17 2zwa_A Leucine carboxyl methyl 99.9 1.2E-25 4.1E-30 250.2 26.4 262 81-381 379-675 (695)
18 2zwa_A Leucine carboxyl methyl 99.9 9.3E-25 3.2E-29 243.0 24.1 255 11-321 378-675 (695)
19 4ery_A WD repeat-containing pr 98.4 0.00023 8E-09 69.4 29.1 247 70-380 46-299 (312)
20 3ow8_A WD repeat-containing pr 98.4 0.00031 1E-08 69.6 28.5 245 70-381 59-311 (321)
21 1got_B GT-beta; complex (GTP-b 98.4 0.00011 3.8E-09 73.2 24.9 252 70-382 78-334 (340)
22 1gxr_A ESG1, transducin-like e 98.2 0.00051 1.7E-08 66.9 25.8 246 70-381 73-327 (337)
23 2pbi_B Guanine nucleotide-bind 98.2 0.00051 1.8E-08 68.9 25.6 254 70-382 87-348 (354)
24 1k8k_C P40, ARP2/3 complex 41 98.2 0.00058 2E-08 67.7 25.5 152 26-218 14-172 (372)
25 3dsm_A Uncharacterized protein 98.2 0.0015 5.2E-08 64.8 28.4 270 69-403 17-301 (328)
26 2ynn_A Coatomer subunit beta'; 98.2 0.00035 1.2E-08 68.3 23.3 217 70-345 36-260 (304)
27 1vyh_C Platelet-activating fac 98.2 0.00036 1.2E-08 71.5 24.3 138 70-226 131-272 (410)
28 3zwl_B Eukaryotic translation 98.1 0.00099 3.4E-08 65.6 25.3 285 26-382 38-337 (369)
29 3no2_A Uncharacterized protein 98.1 0.00046 1.6E-08 67.1 22.1 205 70-318 16-230 (276)
30 3bws_A Protein LP49; two-domai 98.0 0.0014 4.8E-08 66.7 25.7 135 70-224 145-297 (433)
31 1gxr_A ESG1, transducin-like e 98.0 0.00065 2.2E-08 66.1 21.7 230 92-381 54-286 (337)
32 3vgz_A Uncharacterized protein 98.0 0.0032 1.1E-07 61.8 26.8 248 70-380 70-334 (353)
33 1l0q_A Surface layer protein; 98.0 0.0025 8.5E-08 63.9 26.0 137 70-226 13-154 (391)
34 3vl1_A 26S proteasome regulato 98.0 0.0027 9.4E-08 64.2 26.5 225 70-345 120-366 (420)
35 3fm0_A Protein CIAO1; WDR39,SG 98.0 0.0013 4.5E-08 65.5 22.9 186 26-263 22-215 (345)
36 4aez_A CDC20, WD repeat-contai 98.0 0.0017 5.8E-08 66.0 24.1 250 70-382 114-371 (401)
37 3u4y_A Uncharacterized protein 97.9 0.0055 1.9E-07 59.8 27.0 131 70-220 21-161 (331)
38 3vl1_A 26S proteasome regulato 97.9 0.00095 3.3E-08 67.6 22.0 137 70-226 79-219 (420)
39 1erj_A Transcriptional repress 97.9 0.0028 9.6E-08 64.3 25.1 114 93-226 127-245 (393)
40 3hfq_A Uncharacterized protein 97.9 0.00094 3.2E-08 66.1 20.7 146 70-223 19-176 (347)
41 3ow8_A WD repeat-containing pr 97.9 0.0063 2.1E-07 60.0 26.3 163 70-263 103-269 (321)
42 4e54_B DNA damage-binding prot 97.9 0.0019 6.4E-08 66.5 23.2 135 70-221 143-284 (435)
43 2pbi_B Guanine nucleotide-bind 97.9 0.0039 1.3E-07 62.3 24.9 233 93-381 68-305 (354)
44 3iz6_a 40S ribosomal protein R 97.9 0.0029 9.8E-08 63.9 24.0 258 73-382 50-320 (380)
45 3iz6_a 40S ribosomal protein R 97.9 0.0029 9.8E-08 63.9 23.9 258 70-382 89-366 (380)
46 3dsm_A Uncharacterized protein 97.8 0.0079 2.7E-07 59.6 25.7 133 70-226 65-219 (328)
47 2hes_X YDR267CP; beta-propelle 97.8 0.0026 8.9E-08 62.9 22.0 143 70-223 35-188 (330)
48 3no2_A Uncharacterized protein 97.8 0.0017 5.9E-08 63.0 20.2 217 100-378 4-230 (276)
49 4h5i_A Guanine nucleotide-exch 97.8 0.016 5.6E-07 58.1 28.0 235 97-382 79-334 (365)
50 2aq5_A Coronin-1A; WD40 repeat 97.8 0.0022 7.5E-08 65.0 21.4 233 92-380 84-333 (402)
51 1got_B GT-beta; complex (GTP-b 97.8 0.005 1.7E-07 61.0 23.4 225 94-381 60-291 (340)
52 3ei3_B DNA damage-binding prot 97.8 0.0047 1.6E-07 61.8 23.1 133 70-219 97-236 (383)
53 2z2n_A Virginiamycin B lyase; 97.8 0.03 1E-06 53.3 28.0 132 70-223 37-174 (299)
54 2ymu_A WD-40 repeat protein; u 97.7 0.0058 2E-07 64.7 24.7 243 70-382 326-571 (577)
55 1pgu_A Actin interacting prote 97.7 0.0052 1.8E-07 65.3 24.0 268 25-382 23-319 (615)
56 1nr0_A Actin interacting prote 97.7 0.011 3.7E-07 63.9 26.4 136 70-223 213-359 (611)
57 3mkq_A Coatomer beta'-subunit; 97.7 0.0039 1.3E-07 69.1 23.3 151 26-221 19-174 (814)
58 4ery_A WD repeat-containing pr 97.7 0.047 1.6E-06 52.7 29.2 167 70-263 88-258 (312)
59 1l0q_A Surface layer protein; 97.7 0.0077 2.6E-07 60.2 23.1 136 70-226 55-196 (391)
60 1r5m_A SIR4-interacting protei 97.7 0.0087 3E-07 60.0 23.5 231 91-381 110-351 (425)
61 3dm0_A Maltose-binding peripla 97.7 0.013 4.4E-07 64.2 26.5 165 70-263 406-582 (694)
62 2ovr_B FBW7, F-BOX/WD repeat p 97.6 0.019 6.4E-07 58.9 26.2 243 70-382 180-429 (445)
63 1r5m_A SIR4-interacting protei 97.6 0.0034 1.1E-07 63.1 20.1 151 26-223 114-282 (425)
64 2pm9_A Protein WEB1, protein t 97.6 0.016 5.6E-07 58.1 24.9 142 70-220 90-250 (416)
65 3fm0_A Protein CIAO1; WDR39,SG 97.6 0.002 6.8E-08 64.2 17.7 190 91-321 18-215 (345)
66 3odt_A Protein DOA1; ubiquitin 97.6 0.018 6E-07 55.2 23.9 129 70-217 40-172 (313)
67 2qc5_A Streptogramin B lactona 97.6 0.052 1.8E-06 51.5 28.6 152 23-223 22-179 (300)
68 2pm9_A Protein WEB1, protein t 97.6 0.018 6.1E-07 57.8 24.9 261 70-382 46-328 (416)
69 2ymu_A WD-40 repeat protein; u 97.6 0.0096 3.3E-07 63.0 23.8 243 70-381 285-529 (577)
70 3dwl_C Actin-related protein 2 97.6 0.0015 5.3E-08 65.1 16.5 136 71-220 35-178 (377)
71 4gga_A P55CDC, cell division c 97.6 0.0067 2.3E-07 62.0 21.4 133 70-221 126-263 (420)
72 3jrp_A Fusion protein of prote 97.6 0.0037 1.3E-07 61.8 18.9 241 93-382 15-278 (379)
73 3sfz_A APAF-1, apoptotic pepti 97.6 0.013 4.5E-07 68.4 26.4 269 26-382 621-904 (1249)
74 1p22_A F-BOX/WD-repeat protein 97.6 0.013 4.4E-07 60.1 23.4 135 70-226 154-292 (435)
75 1ri6_A Putative isomerase YBHE 97.5 0.018 6.2E-07 55.9 23.2 137 70-218 61-208 (343)
76 2xzm_R RACK1; ribosome, transl 97.5 0.022 7.6E-07 56.2 24.1 88 70-169 50-145 (343)
77 3jrp_A Fusion protein of prote 97.5 0.0046 1.6E-07 61.0 19.1 247 26-354 17-295 (379)
78 1rwi_B Serine/threonine-protei 97.5 0.052 1.8E-06 51.0 25.8 133 71-223 48-184 (270)
79 2pm7_B Protein transport prote 97.5 0.012 4.1E-07 57.0 21.6 249 27-355 16-294 (297)
80 3mmy_A MRNA export factor; mRN 97.5 0.019 6.5E-07 56.2 23.2 88 70-169 65-156 (368)
81 4g56_B MGC81050 protein; prote 97.5 0.011 3.7E-07 59.2 21.6 275 27-382 49-334 (357)
82 1erj_A Transcriptional repress 97.5 0.026 9E-07 57.0 24.7 138 70-220 146-288 (393)
83 1vyh_C Platelet-activating fac 97.5 0.017 5.8E-07 58.9 23.4 88 70-169 173-261 (410)
84 3sfz_A APAF-1, apoptotic pepti 97.5 0.0065 2.2E-07 71.0 22.7 246 70-382 984-1240(1249)
85 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.089 3E-06 52.5 28.4 245 70-379 114-367 (376)
86 3scy_A Hypothetical bacterial 97.5 0.017 5.9E-07 57.2 22.8 146 70-220 30-187 (361)
87 1nr0_A Actin interacting prote 97.5 0.015 5.1E-07 62.7 23.9 219 70-345 40-271 (611)
88 3u4y_A Uncharacterized protein 97.5 0.074 2.5E-06 51.5 26.7 139 70-222 63-210 (331)
89 1rwi_B Serine/threonine-protei 97.5 0.056 1.9E-06 50.8 24.9 219 94-380 28-253 (270)
90 1ri6_A Putative isomerase YBHE 97.4 0.024 8.2E-07 55.0 22.8 142 70-223 16-165 (343)
91 3bws_A Protein LP49; two-domai 97.4 0.017 5.7E-07 58.6 22.4 139 70-226 192-341 (433)
92 1nir_A Nitrite reductase; hemo 97.4 0.0074 2.5E-07 64.5 20.1 277 70-406 160-460 (543)
93 3hfq_A Uncharacterized protein 97.4 0.018 6E-07 56.7 21.6 141 70-223 64-224 (347)
94 3v7d_B Cell division control p 97.4 0.043 1.5E-06 56.3 25.3 217 70-345 184-422 (464)
95 2ynn_A Coatomer subunit beta'; 97.4 0.01 3.4E-07 57.7 19.4 164 70-263 78-249 (304)
96 3fvz_A Peptidyl-glycine alpha- 97.4 0.1 3.4E-06 51.3 26.9 148 70-226 70-234 (329)
97 3dwl_C Actin-related protein 2 97.4 0.0011 3.7E-08 66.3 12.3 112 95-221 17-133 (377)
98 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.037 1.2E-06 56.6 24.3 238 70-381 140-381 (445)
99 3v7d_B Cell division control p 97.4 0.052 1.8E-06 55.6 25.5 244 70-379 143-410 (464)
100 3i2n_A WD repeat-containing pr 97.4 0.0077 2.6E-07 58.9 17.9 145 70-223 45-203 (357)
101 4aez_A CDC20, WD repeat-contai 97.4 0.047 1.6E-06 55.1 24.3 214 70-345 157-381 (401)
102 1q7f_A NHL, brain tumor CG1071 97.3 0.11 3.7E-06 49.5 25.4 184 24-262 33-226 (286)
103 3jro_A Fusion protein of prote 97.3 0.0042 1.4E-07 69.1 17.3 240 95-382 15-276 (753)
104 1sq9_A Antiviral protein SKI8; 97.3 0.035 1.2E-06 55.3 22.6 144 70-226 37-223 (397)
105 3lrv_A PRE-mRNA-splicing facto 97.3 0.05 1.7E-06 53.6 23.3 132 73-221 108-246 (343)
106 2ojh_A Uncharacterized protein 97.3 0.061 2.1E-06 50.4 22.9 259 70-381 23-292 (297)
107 1k8k_C P40, ARP2/3 complex 41 97.3 0.0078 2.7E-07 59.4 16.9 113 94-221 13-129 (372)
108 3scy_A Hypothetical bacterial 97.3 0.054 1.9E-06 53.5 23.2 141 72-223 80-246 (361)
109 4aow_A Guanine nucleotide-bind 97.2 0.12 4.1E-06 49.9 25.0 165 70-263 62-236 (340)
110 3vgz_A Uncharacterized protein 97.2 0.079 2.7E-06 51.6 23.9 123 95-227 46-181 (353)
111 4ggc_A P55CDC, cell division c 97.2 0.028 9.5E-07 54.0 19.9 133 70-221 46-183 (318)
112 3k26_A Polycomb protein EED; W 97.2 0.049 1.7E-06 53.2 22.1 91 70-169 96-188 (366)
113 3frx_A Guanine nucleotide-bind 97.2 0.074 2.5E-06 51.9 23.2 144 88-263 64-217 (319)
114 1yfq_A Cell cycle arrest prote 97.2 0.055 1.9E-06 52.5 22.2 88 70-169 34-127 (342)
115 1nir_A Nitrite reductase; hemo 97.2 0.27 9.3E-06 52.2 29.2 280 69-405 200-515 (543)
116 3zwl_B Eukaryotic translation 97.2 0.06 2.1E-06 52.5 22.4 240 70-345 97-347 (369)
117 4a11_B DNA excision repair pro 97.2 0.0095 3.2E-07 59.4 16.5 139 72-223 26-179 (408)
118 3jro_A Fusion protein of prote 97.2 0.018 6E-07 64.0 20.1 232 70-356 32-295 (753)
119 3bg1_A Protein SEC13 homolog; 97.1 0.019 6.5E-07 56.1 18.0 90 70-169 36-132 (316)
120 3bg1_A Protein SEC13 homolog; 97.1 0.023 8E-07 55.5 18.4 114 95-223 19-141 (316)
121 2pm7_B Protein transport prote 97.1 0.027 9.2E-07 54.4 18.6 112 94-220 14-133 (297)
122 3k26_A Polycomb protein EED; W 97.1 0.036 1.2E-06 54.2 19.6 135 70-221 45-194 (366)
123 3frx_A Guanine nucleotide-bind 97.1 0.049 1.7E-06 53.2 20.4 138 70-226 88-234 (319)
124 3mkq_A Coatomer beta'-subunit; 97.1 0.11 3.7E-06 57.3 25.3 164 70-263 78-249 (814)
125 2z2n_A Virginiamycin B lyase; 97.0 0.22 7.6E-06 47.0 26.1 131 71-223 80-216 (299)
126 1pby_B Quinohemoprotein amine 97.0 0.26 8.9E-06 47.3 25.1 139 70-226 12-170 (337)
127 4g56_B MGC81050 protein; prote 96.9 0.064 2.2E-06 53.5 20.1 135 70-223 116-262 (357)
128 4gqb_B Methylosome protein 50; 96.9 0.12 4.1E-06 51.3 21.7 136 70-223 104-250 (344)
129 2hqs_A Protein TOLB; TOLB, PAL 96.8 0.23 7.8E-06 50.6 23.6 80 69-157 159-238 (415)
130 2hes_X YDR267CP; beta-propelle 96.8 0.095 3.2E-06 51.4 20.0 137 70-219 81-230 (330)
131 1sq9_A Antiviral protein SKI8; 96.8 0.094 3.2E-06 52.1 20.0 147 70-226 92-274 (397)
132 3dm0_A Maltose-binding peripla 96.8 0.18 6.3E-06 54.9 23.7 139 70-224 453-597 (694)
133 3ei3_B DNA damage-binding prot 96.7 0.27 9.3E-06 48.7 22.9 134 70-221 142-284 (383)
134 4e54_B DNA damage-binding prot 96.7 0.17 5.9E-06 51.5 21.5 133 70-221 188-329 (435)
135 3v9f_A Two-component system se 96.7 0.49 1.7E-05 52.4 26.6 254 71-380 385-647 (781)
136 4gga_A P55CDC, cell division c 96.7 0.3 1E-05 49.4 23.0 138 70-225 170-316 (420)
137 3dw8_B Serine/threonine-protei 96.6 0.32 1.1E-05 49.0 22.8 75 144-221 180-260 (447)
138 3odt_A Protein DOA1; ubiquitin 96.6 0.26 8.9E-06 46.7 21.0 103 95-216 24-130 (313)
139 2aq5_A Coronin-1A; WD40 repeat 96.6 0.052 1.8E-06 54.6 16.5 135 70-221 105-256 (402)
140 4a2l_A BT_4663, two-component 96.4 1.5 5.3E-05 48.4 33.1 254 70-380 378-650 (795)
141 2ecf_A Dipeptidyl peptidase IV 96.4 0.45 1.5E-05 51.9 23.6 111 24-169 40-177 (741)
142 4a11_B DNA excision repair pro 96.4 0.38 1.3E-05 47.5 21.2 149 26-221 49-220 (408)
143 1p22_A F-BOX/WD-repeat protein 96.4 0.25 8.7E-06 50.2 20.2 159 70-263 194-355 (435)
144 3mmy_A MRNA export factor; mRN 96.4 0.17 5.9E-06 49.1 18.2 117 88-222 38-163 (368)
145 2xbg_A YCF48-like protein; pho 96.3 0.89 3.1E-05 44.6 27.0 234 79-380 66-312 (327)
146 1yfq_A Cell cycle arrest prote 96.3 0.088 3E-06 51.0 15.8 116 88-219 10-131 (342)
147 3f3f_A Nucleoporin SEH1; struc 96.3 0.42 1.4E-05 45.6 20.4 94 70-169 34-139 (351)
148 4h5i_A Guanine nucleotide-exch 96.3 0.14 4.9E-06 51.1 17.5 167 70-263 158-333 (365)
149 3f3f_A Nucleoporin SEH1; struc 96.3 0.73 2.5E-05 43.8 22.0 115 94-221 16-145 (351)
150 3gre_A Serine/threonine-protei 96.3 0.13 4.6E-06 52.0 17.3 173 73-263 47-235 (437)
151 3i2n_A WD repeat-containing pr 96.2 0.19 6.6E-06 48.7 17.7 115 93-221 22-150 (357)
152 1pgu_A Actin interacting prote 96.2 0.24 8.1E-06 52.3 19.6 227 88-382 17-274 (615)
153 1q7f_A NHL, brain tumor CG1071 96.2 0.49 1.7E-05 44.7 20.0 134 70-221 101-240 (286)
154 1jmx_B Amine dehydrogenase; ox 96.1 0.3 1E-05 47.2 18.3 112 97-221 7-136 (349)
155 1jmx_B Amine dehydrogenase; ox 96.1 0.1 3.5E-06 50.6 14.8 141 70-226 22-182 (349)
156 3fvz_A Peptidyl-glycine alpha- 96.0 1.3 4.3E-05 43.2 27.5 245 94-381 28-312 (329)
157 2xbg_A YCF48-like protein; pho 96.0 1.3 4.5E-05 43.3 24.6 236 79-380 25-269 (327)
158 3lrv_A PRE-mRNA-splicing facto 96.0 0.25 8.4E-06 48.5 17.3 140 70-224 150-299 (343)
159 2hqs_A Protein TOLB; TOLB, PAL 95.9 0.43 1.5E-05 48.5 19.2 137 70-223 204-348 (415)
160 2vdu_B TRNA (guanine-N(7)-)-me 95.9 1.5 5.2E-05 44.6 23.3 141 70-226 126-278 (450)
161 4gqb_B Methylosome protein 50; 95.7 0.18 6.2E-06 50.0 15.1 137 70-223 150-293 (344)
162 1jof_A Carboxy-CIS,CIS-muconat 95.7 0.99 3.4E-05 44.6 20.3 140 70-223 17-181 (365)
163 2dg1_A DRP35, lactonase; beta 95.6 0.85 2.9E-05 44.0 19.3 137 70-219 67-213 (333)
164 3mbr_X Glutamine cyclotransfer 95.6 1.6 5.4E-05 41.2 21.2 138 70-226 44-186 (243)
165 3q7m_A Lipoprotein YFGL, BAMB; 95.6 2 6.8E-05 42.4 27.9 244 70-379 64-326 (376)
166 3vu4_A KMHSV2; beta-propeller 95.5 0.78 2.7E-05 45.3 18.9 103 93-220 23-129 (355)
167 2qc5_A Streptogramin B lactona 95.5 1.6 5.5E-05 40.9 25.1 132 70-223 84-221 (300)
168 2dg1_A DRP35, lactonase; beta 95.5 1.9 6.4E-05 41.5 23.2 114 93-223 48-175 (333)
169 1pjx_A Dfpase, DIISOPROPYLFLUO 95.5 1.8 6E-05 41.1 21.6 113 94-223 22-165 (314)
170 4aow_A Guanine nucleotide-bind 95.4 0.33 1.1E-05 46.7 15.2 138 70-221 196-339 (340)
171 2xyi_A Probable histone-bindin 95.3 0.6 2.1E-05 47.4 17.7 136 76-220 114-264 (430)
172 3e5z_A Putative gluconolactona 95.3 1.2 4.1E-05 42.3 18.7 136 70-221 91-248 (296)
173 2ecf_A Dipeptidyl peptidase IV 95.3 1.1 3.7E-05 48.8 20.6 115 94-224 41-186 (741)
174 3e5z_A Putative gluconolactona 95.2 2.1 7.3E-05 40.5 24.8 132 70-222 51-206 (296)
175 2bkl_A Prolyl endopeptidase; m 94.9 1.9 6.5E-05 46.9 21.3 164 26-226 126-314 (695)
176 2xzm_R RACK1; ribosome, transl 94.8 0.85 2.9E-05 44.5 16.6 132 70-218 99-243 (343)
177 1pjx_A Dfpase, DIISOPROPYLFLUO 94.8 2.8 9.7E-05 39.6 22.1 82 70-160 47-135 (314)
178 3nol_A Glutamine cyclotransfer 94.7 1.6 5.5E-05 41.6 17.4 61 89-158 42-102 (262)
179 4d9s_A UVB-resistance protein 94.6 4.3 0.00015 41.0 22.5 72 303-383 287-359 (406)
180 2ojh_A Uncharacterized protein 94.6 0.87 3E-05 42.2 15.3 137 69-223 110-262 (297)
181 3hrp_A Uncharacterized protein 94.5 4.7 0.00016 40.8 22.8 113 94-223 135-253 (409)
182 3mbr_X Glutamine cyclotransfer 94.3 3.4 0.00012 38.9 18.5 60 90-158 21-80 (243)
183 3o4h_A Acylamino-acid-releasin 94.2 1 3.4E-05 47.7 16.4 153 25-223 26-188 (582)
184 4ggc_A P55CDC, cell division c 94.1 4 0.00014 38.4 23.0 88 70-169 90-177 (318)
185 3pe7_A Oligogalacturonate lyas 94.1 4.8 0.00016 39.3 22.1 50 70-122 61-110 (388)
186 2iwa_A Glutamine cyclotransfer 94.0 4.4 0.00015 38.6 19.4 159 24-226 24-188 (266)
187 2z3z_A Dipeptidyl aminopeptida 94.0 2.5 8.7E-05 45.5 19.5 83 71-169 46-146 (706)
188 2iwa_A Glutamine cyclotransfer 94.0 2 6.7E-05 41.2 16.3 75 145-227 24-103 (266)
189 2vdu_B TRNA (guanine-N(7)-)-me 93.8 2.9 0.0001 42.3 18.6 92 70-169 221-335 (450)
190 3nol_A Glutamine cyclotransfer 93.8 4.8 0.00016 38.3 19.9 138 70-226 66-208 (262)
191 3nok_A Glutaminyl cyclase; bet 93.5 3.9 0.00013 39.1 17.2 137 71-226 77-217 (268)
192 1qks_A Cytochrome CD1 nitrite 93.4 5.1 0.00017 42.6 20.2 142 70-222 178-332 (567)
193 1pby_B Quinohemoprotein amine 93.4 2.3 7.9E-05 40.4 16.2 111 102-226 2-131 (337)
194 3g4e_A Regucalcin; six bladed 93.0 6.2 0.00021 37.4 19.6 75 70-158 36-114 (297)
195 2oaj_A Protein SNI1; WD40 repe 92.8 3.6 0.00012 46.5 18.6 27 200-226 713-739 (902)
196 3v9f_A Two-component system se 92.6 9.6 0.00033 41.8 21.6 137 71-223 471-615 (781)
197 3nok_A Glutaminyl cyclase; bet 92.5 7.7 0.00026 37.0 18.2 72 146-227 59-133 (268)
198 3g4e_A Regucalcin; six bladed 92.3 2.7 9.2E-05 40.1 14.8 144 70-226 74-236 (297)
199 2z3z_A Dipeptidyl aminopeptida 92.2 14 0.00049 39.5 24.6 80 70-160 102-199 (706)
200 3dw8_B Serine/threonine-protei 92.0 3.5 0.00012 41.2 15.8 145 70-223 199-377 (447)
201 3sjl_D Methylamine dehydrogena 91.9 12 0.0004 37.8 20.4 52 70-122 110-168 (386)
202 3kci_A Probable E3 ubiquitin-p 91.6 4.1 0.00014 40.9 15.8 73 303-383 275-347 (389)
203 3gre_A Serine/threonine-protei 91.6 2.1 7.1E-05 42.9 13.7 90 70-169 193-288 (437)
204 3dr2_A Exported gluconolactona 91.3 7.3 0.00025 37.1 16.7 138 70-222 108-270 (305)
205 3azo_A Aminopeptidase; POP fam 91.1 18 0.0006 38.4 25.6 144 70-224 103-279 (662)
206 2oaj_A Protein SNI1; WD40 repe 90.9 12 0.0004 42.2 20.2 108 94-222 22-132 (902)
207 2w18_A PALB2, fancn, partner a 90.9 13 0.00046 36.9 18.1 167 69-263 157-347 (356)
208 3vu4_A KMHSV2; beta-propeller 89.8 3.2 0.00011 40.7 12.8 49 71-122 220-270 (355)
209 1xfd_A DIP, dipeptidyl aminope 88.7 21 0.00072 38.2 19.4 86 70-161 38-133 (723)
210 2xdw_A Prolyl endopeptidase; a 88.6 30 0.001 37.3 22.2 108 26-161 130-252 (710)
211 4gq1_A NUP37; propeller, trans 88.3 16 0.00056 36.0 17.0 89 70-169 112-214 (393)
212 1qks_A Cytochrome CD1 nitrite 88.2 22 0.00076 37.6 18.8 108 99-227 165-283 (567)
213 2j04_A TAU60, YPL007P, hypothe 88.2 6 0.00021 42.2 13.9 130 70-222 108-257 (588)
214 3hrp_A Uncharacterized protein 87.9 24 0.00081 35.4 18.4 156 24-219 134-298 (409)
215 3o4h_A Acylamino-acid-releasin 87.5 5.2 0.00018 42.0 13.3 139 71-223 134-278 (582)
216 1xfd_A DIP, dipeptidyl aminope 87.4 33 0.0011 36.6 26.3 84 69-162 91-193 (723)
217 2w18_A PALB2, fancn, partner a 87.1 8 0.00027 38.5 13.4 136 70-217 204-355 (356)
218 3pe7_A Oligogalacturonate lyas 87.1 23 0.00078 34.3 18.3 140 70-223 103-277 (388)
219 1yr2_A Prolyl oligopeptidase; 85.7 43 0.0015 36.2 21.4 163 26-226 168-359 (741)
220 2fp8_A Strictosidine synthase; 84.5 29 0.00098 33.1 19.1 132 71-221 103-271 (322)
221 2fp8_A Strictosidine synthase; 83.8 30 0.001 32.9 21.8 66 307-379 235-301 (322)
222 3c5m_A Oligogalacturonate lyas 81.9 25 0.00085 33.9 14.6 81 70-160 217-301 (396)
223 4a2l_A BT_4663, two-component 77.6 86 0.0029 34.1 30.6 141 71-224 237-391 (795)
224 2xyi_A Probable histone-bindin 77.4 21 0.00073 35.6 12.6 141 70-222 255-413 (430)
225 1k32_A Tricorn protease; prote 76.7 41 0.0014 38.2 16.0 81 70-161 359-440 (1045)
226 1tl2_A L10, protein (tachylect 75.7 16 0.00054 34.0 9.8 101 94-208 92-199 (236)
227 3c5m_A Oligogalacturonate lyas 74.4 27 0.00093 33.6 12.2 93 70-169 265-378 (396)
228 1npe_A Nidogen, entactin; glyc 73.8 54 0.0018 30.0 18.2 140 70-227 102-246 (267)
229 1k32_A Tricorn protease; prote 73.6 26 0.00088 39.8 13.3 84 70-161 401-491 (1045)
230 2j04_A TAU60, YPL007P, hypothe 72.6 18 0.0006 38.6 10.6 120 90-221 86-213 (588)
231 2p9w_A MAL S 1 allergenic prot 72.4 62 0.0021 31.7 13.8 160 201-380 24-204 (334)
232 2j04_B YDR362CP, TAU91; beta p 71.8 15 0.0005 38.5 9.9 131 70-219 288-428 (524)
233 2xdw_A Prolyl endopeptidase; a 71.7 1.1E+02 0.0038 32.7 24.0 62 93-162 128-191 (710)
234 3ott_A Two-component system se 70.9 75 0.0026 34.4 15.8 127 71-219 495-626 (758)
235 1w8o_A Bacterial sialidase; 3D 69.6 15 0.00052 38.9 9.6 129 344-501 305-438 (601)
236 3azo_A Aminopeptidase; POP fam 69.1 53 0.0018 34.6 13.8 90 70-169 266-363 (662)
237 2p4o_A Hypothetical protein; p 68.7 39 0.0013 31.9 11.5 100 23-158 34-133 (306)
238 2p4o_A Hypothetical protein; p 67.3 83 0.0028 29.5 23.9 109 93-220 35-148 (306)
239 3mvd_K Regulator of chromosome 66.4 46 0.0016 33.3 12.1 19 142-160 302-320 (423)
240 1jof_A Carboxy-CIS,CIS-muconat 64.9 39 0.0013 32.7 10.9 94 70-169 168-287 (365)
241 3a72_A EXO-arabinanase; arabin 63.1 38 0.0013 33.4 10.4 169 191-377 23-221 (355)
242 2ad6_A Methanol dehydrogenase 62.6 1.5E+02 0.0053 30.9 29.9 82 71-160 75-168 (571)
243 3tc9_A Hypothetical hydrolase; 61.6 1.3E+02 0.0043 30.2 14.3 133 70-218 160-300 (430)
244 3dr2_A Exported gluconolactona 61.4 1E+02 0.0036 28.6 17.0 77 71-158 69-147 (305)
245 2ghs_A AGR_C_1268P; regucalcin 59.2 1.2E+02 0.0042 28.7 17.7 136 71-220 111-261 (326)
246 2ghs_A AGR_C_1268P; regucalcin 58.8 1E+02 0.0034 29.3 12.5 75 70-158 72-150 (326)
247 1kv9_A Type II quinohemoprotei 55.7 2.1E+02 0.0074 30.4 26.3 58 70-133 77-144 (668)
248 2oiz_A Aromatic amine dehydrog 51.6 45 0.0015 32.5 8.7 74 69-154 286-360 (361)
249 2vov_A MOPE, surface-associate 50.6 22 0.00074 31.7 5.3 34 477-516 278-332 (336)
250 2oit_A Nucleoporin 214KDA; NH2 49.5 28 0.00094 35.2 6.8 69 92-171 152-222 (434)
251 3ott_A Two-component system se 47.7 2E+02 0.0068 30.9 13.9 109 97-223 479-590 (758)
252 3das_A Putative oxidoreductase 47.2 1.9E+02 0.0064 28.3 12.3 123 10-162 22-160 (347)
253 3tc9_A Hypothetical hydrolase; 46.4 1.6E+02 0.0054 29.5 12.0 60 91-159 227-288 (430)
254 1cru_A Protein (soluble quinop 45.7 1.6E+02 0.0055 29.8 12.0 121 11-162 18-164 (454)
255 2j04_B YDR362CP, TAU91; beta p 44.8 25 0.00084 36.8 5.7 89 70-169 334-424 (524)
256 3qhy_B Beta-lactamase inhibito 44.4 57 0.002 30.8 7.8 50 99-161 79-128 (282)
257 2oiz_A Aromatic amine dehydrog 44.1 1.9E+02 0.0064 27.9 11.9 96 70-173 32-141 (361)
258 3kci_A Probable E3 ubiquitin-p 44.1 1.5E+02 0.0052 29.1 11.3 73 303-383 223-295 (389)
259 1kb0_A Quinohemoprotein alcoho 43.9 3.2E+02 0.011 29.1 23.9 58 70-133 88-155 (677)
260 3mvd_K Regulator of chromosome 43.6 1E+02 0.0034 30.7 10.0 73 303-383 304-376 (423)
261 4gq1_A NUP37; propeller, trans 43.5 65 0.0022 31.5 8.5 53 101-162 328-380 (393)
262 2p9w_A MAL S 1 allergenic prot 43.4 2.4E+02 0.0083 27.4 13.7 28 92-122 187-214 (334)
263 1yiq_A Quinohemoprotein alcoho 43.1 3.4E+02 0.012 29.0 23.0 58 70-133 81-148 (689)
264 2ad6_A Methanol dehydrogenase 42.4 74 0.0025 33.5 9.1 78 69-158 444-523 (571)
265 4hw6_A Hypothetical protein, I 39.6 2.5E+02 0.0086 28.0 12.3 61 90-159 228-291 (433)
266 3hxj_A Pyrrolo-quinoline quino 38.3 2.4E+02 0.0081 25.9 17.0 127 70-224 158-290 (330)
267 3a9g_A Putative uncharacterize 37.6 2.9E+02 0.0099 26.7 12.2 28 11-39 20-47 (354)
268 4hw6_A Hypothetical protein, I 37.0 3.3E+02 0.011 27.1 15.9 133 70-217 163-302 (433)
269 1flg_A Protein (quinoprotein e 36.7 1E+02 0.0035 32.5 9.0 78 69-158 466-545 (582)
270 2gop_A Trilobed protease; beta 35.8 1.4E+02 0.0046 28.0 9.2 79 70-161 86-189 (347)
271 1w6s_A Methanol dehydrogenase 35.7 92 0.0031 33.1 8.5 78 69-158 453-532 (599)
272 3sjl_D Methylamine dehydrogena 35.7 1.5E+02 0.0051 29.5 9.6 130 70-209 60-206 (386)
273 2jkb_A Sialidase B; intramolec 34.7 4.4E+02 0.015 28.3 13.7 39 340-378 617-657 (686)
274 2bkl_A Prolyl endopeptidase; m 34.2 4.4E+02 0.015 27.8 23.3 84 72-162 97-188 (695)
275 1kv9_A Type II quinohemoprotei 33.9 3.3E+02 0.011 28.9 12.7 97 253-380 66-171 (668)
276 2ism_A Putative oxidoreductase 33.5 3.3E+02 0.011 26.1 11.8 117 9-161 20-154 (352)
277 2hz6_A Endoplasmic reticulum t 28.2 1.1E+02 0.0039 29.7 7.2 54 70-132 20-75 (369)
278 1w8o_A Bacterial sialidase; 3D 27.9 2.5E+02 0.0086 29.2 10.4 125 78-209 199-340 (601)
279 1z68_A Fibroblast activation p 27.9 1.6E+02 0.0054 31.2 8.9 82 69-162 90-189 (719)
280 1n7d_A LDL receptor, low-densi 27.9 5.4E+02 0.019 27.5 13.2 141 70-226 476-621 (699)
281 3c75_H MADH, methylamine dehyd 27.4 2E+02 0.0068 29.0 9.0 96 69-173 99-210 (426)
282 2oit_A Nucleoporin 214KDA; NH2 27.2 85 0.0029 31.5 6.2 50 70-122 173-222 (434)
283 1z68_A Fibroblast activation p 27.2 3E+02 0.01 28.9 11.0 139 70-222 279-446 (719)
284 2gop_A Trilobed protease; beta 26.4 1.3E+02 0.0044 28.1 7.1 78 70-161 44-123 (347)
285 2qe8_A Uncharacterized protein 26.3 1.1E+02 0.0037 29.3 6.5 61 92-161 250-310 (343)
286 1flg_A Protein (quinoprotein e 26.2 3.5E+02 0.012 28.2 11.1 57 71-133 80-144 (582)
287 1yiq_A Quinohemoprotein alcoho 26.1 1.8E+02 0.0063 31.2 9.0 78 69-158 455-534 (689)
288 4fj6_A Glycoside hydrolase fam 25.0 5.9E+02 0.02 26.3 13.4 123 8-158 361-502 (523)
289 3of7_A Regulator of chromosome 24.2 2.8E+02 0.0095 28.0 9.6 116 25-159 268-402 (473)
290 1w6s_A Methanol dehydrogenase 24.0 6.4E+02 0.022 26.4 26.3 57 71-133 75-148 (599)
291 3c75_H MADH, methylamine dehyd 23.9 3E+02 0.01 27.7 9.5 116 101-227 85-217 (426)
292 3iuj_A Prolyl endopeptidase; h 23.6 3E+02 0.01 29.2 10.1 106 27-160 135-252 (693)
293 1kb0_A Quinohemoprotein alcoho 22.2 7.1E+02 0.024 26.3 27.2 62 70-133 139-207 (677)
294 2b4w_A Hypothetical protein, c 21.7 3.6E+02 0.012 25.7 8.6 101 27-159 36-149 (315)
295 4fj6_A Glycoside hydrolase fam 21.6 6.8E+02 0.023 25.8 14.4 128 72-207 355-502 (523)
296 2xzi_A KDNAse, extracellular s 21.3 2.2E+02 0.0075 28.0 7.8 122 8-158 214-352 (386)
297 4a5s_A Dipeptidyl peptidase 4 21.1 2.1E+02 0.0073 30.6 8.3 82 70-159 37-129 (740)
298 1npe_A Nidogen, entactin; glyc 21.0 4.4E+02 0.015 23.4 18.2 133 70-220 59-199 (267)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.6e-73 Score=632.97 Aligned_cols=451 Identities=24% Similarity=0.344 Sum_probs=348.3
Q ss_pred CCCceEEcccCcccceeEEEEee-CCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccc
Q 044265 8 LPGTWELVLADAGISSMHTAVTR-FNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMI 86 (517)
Q Consensus 8 ~~g~W~~~~~~~~~~~~h~~ll~-~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~ 86 (517)
..++|+.+.++ +....|+++++ +||||++||.+.. .. |.. ......+.+|||.+++|+.+..
T Consensus 174 ~~~~W~~~~~~-P~~~~~~av~~~~g~l~v~GG~~~~--~~----~~~----------~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 174 GLGRWGPTIDL-PIVPAAAAIEPTSGRVLMWSSYRND--AF----GGS----------PGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp TSCEEEEEEEC-SSCCSEEEEETTTTEEEEEEECCCT--TT----CSC----------CCSEEEEEEECTTTCCBCCCEE
T ss_pred CCCeeeeeccC-CCCceeEEEEecCCEEEEEeccccc--cc----ccC----------CCCeEEEEEEeCCCCcEEeCcc
Confidence 46899998764 45667888887 9999999997531 11 100 0123468899999999998875
Q ss_pred c---CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCC
Q 044265 87 L---TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGA 163 (517)
Q Consensus 87 ~---~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~ 163 (517)
+ +..+|++++++.||+||++||... .++++|||+ +++|+++ .+|+.+||+|++++++||+|||+||...
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~----t~~W~~~--~~~~~~R~~~s~~~~~dg~iyv~GG~~~ 308 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS----SDSWIPG--PDMQVARGYQSSATMSDGRVFTIGGSWS 308 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG----GTEEEEC--CCCSSCCSSCEEEECTTSCEEEECCCCC
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc----CCceeEC--CCCCccccccceEEecCCeEEEEeCccc
Confidence 5 567888888899999999999764 489999999 8999999 7899999999999999999999999532
Q ss_pred -----CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-----------CceEEEeCCCCeEEEec
Q 044265 164 -----NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-----------DKAVMYDYETNKIAREY 226 (517)
Q Consensus 164 -----~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-----------~~~~~ydp~t~~w~~~~ 226 (517)
.++|+| |.+++|...+..... ..+.... ...+..++++|++|| ..+++||+++++|....
T Consensus 309 ~~~~~~~~e~yd~~t~~W~~~~~~~~~--p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~ 385 (656)
T 1k3i_A 309 GGVFEKNGEVYSPSSKTWTSLPNAKVN--PMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA 385 (656)
T ss_dssp SSSCCCCEEEEETTTTEEEEETTSCSG--GGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE
T ss_pred CCcccccceEeCCCCCcceeCCCcccc--ccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecC
Confidence 579999 999999864211000 0000011 122346888999886 34789999999998543
Q ss_pred CCCCCCC--CCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCC-CCCceec---CCCcc
Q 044265 227 PPLDGGP--RNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSA-DPTWEME---DMPFG 300 (517)
Q Consensus 227 p~~p~~~--r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~-~~~W~~~---~m~~~ 300 (517)
...+... ...+..+++++++. .+++||++||.+.... ..+++.|..++..++ +++|+.. +|+.+
T Consensus 386 ~~~~~~~~~~~~~~~~~av~~~~----~~~~i~v~GG~~~~~~------~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~ 455 (656)
T 1k3i_A 386 GKRQSNRGVAPDAMCGNAVMYDA----VKGKILTFGGSPDYQD------SDATTNAHIITLGEPGTSPNTVFASNGLYFA 455 (656)
T ss_dssp EECEETTEECCCCBTCEEEEEET----TTTEEEEECCBSSSSS------SBCCCCEEEEECCSTTSCCEEEECTTCCSSC
T ss_pred CccccccccCCCCCCCceEeccC----CCCeEEEEeCCCCCCC------CCcCCcceEEEcCCCCCCCeeEEccCCCCCC
Confidence 2221100 00123467777653 3899999999752110 134565555555544 6789863 89999
Q ss_pred eeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCC
Q 044265 301 RIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 301 R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
|.++++++++||+|||+||.+.+. +|. +.+++.++|+|||+++ +|+.+++|+.+|.+|+++++++||+|||+||+
T Consensus 456 R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 456 RTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 999999998999999999986432 221 3456778999999999 99999999999999999999999999999998
Q ss_pred CccccccCCCCCCceeeEEEeCCccCCC--CCCCCCceec-CCceeecCCeEEEEEEecCCceeeEEEEEecCCcccccC
Q 044265 381 PHYFYKFNAEFPTELRIEAFSPEYLSSD--RANLRPVIEE-IPETVRYGEAFDVFVTVPLPVVGILEVNLGNAPFATHSF 457 (517)
Q Consensus 381 ~~~~~~~~~~~~~~~~vE~y~P~yl~~~--~~~~RP~i~~-~p~~~~~g~~~~v~~~~~~~~~~~~~v~l~~~~~~TH~~ 457 (517)
.+..+ .++++++|+|+||||+++ ..+.||+|++ .|+++.||++|+|+++. .+.+|+|+|++|+||++
T Consensus 531 ~~~~~-----~~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~~~~~~g~~~~~~~~~-----~~~~~~l~~~~~~th~~ 600 (656)
T 1k3i_A 531 LCGDC-----TTNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQSVKVGGRITISTDS-----SISKASLIRYGTATHTV 600 (656)
T ss_dssp CCTTC-----SCCCCEEEEEECGGGBCTTSSBCCCCCEEEESCSEEETTCEEEEEESS-----CCSEEEEEECCEEETTB
T ss_pred CCCCC-----CCCeeEEEEEeChhhccCCCCcCCCCcccccCCceecCCCEEEEEEec-----cceEEEEEecCccccCc
Confidence 77532 245889999999999874 4467999999 48999999999999863 24689999999999999
Q ss_pred cCCcceEEeeecccccCCCCcEEEEEeCCCCCCcCCCcceEEEEEc-CCcCcccEEEEee
Q 044265 458 QQGQRLVKITVTPSVPDANGRYRVGCTAPPNGAVAPPGYYMAFVVN-QGVPSVARWVHLI 516 (517)
Q Consensus 458 ~~~qR~~~l~~~~~~~~~~~~~~~~v~~P~~~~~~ppG~ymlf~~~-~gvPS~a~~v~i~ 516 (517)
||+||+|+|+++.. ++ .+++|++|||++||||||||||||+ +||||+|+||+|+
T Consensus 601 ~~~qr~~~l~~~~~---~~--~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 601 NTDQRRIPLTLTNN---GG--NSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 655 (656)
T ss_dssp CSSCCEEECCEEEE---ET--TEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred CCCCcEEecceEec---CC--CEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence 99999999999752 22 4789999999999999999999996 9999999999996
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=296.39 Aligned_cols=272 Identities=16% Similarity=0.233 Sum_probs=214.4
Q ss_pred EEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEE
Q 044265 25 HTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVL 104 (517)
Q Consensus 25 h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~ 104 (517)
+..+..+++||++||.+.. ....+++||+.+++|+.+..++..++..+++..+++||
T Consensus 9 r~~~~~~~~i~v~GG~~~~-----------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly 65 (302)
T 2xn4_A 9 RTPMNLPKLMVVVGGQAPK-----------------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVF 65 (302)
T ss_dssp ------CEEEEEECCBSSS-----------------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred CcccCCCCEEEEECCCCCC-----------------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEE
Confidence 4455568899999996421 12358899999999999988888777777778899999
Q ss_pred EecCCCC--CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCC----CceEEe-CCCCCcee
Q 044265 105 QTGGDLD--GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGA----NTVEYY-PPRNGAVS 177 (517)
Q Consensus 105 v~GG~~~--g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~----~~~E~y-P~~~~w~~ 177 (517)
++||... ..+.+++||+. +++|+++ .+|+.+|.+|+++++ +++||++||.+. .++|+| |.+++|..
T Consensus 66 v~GG~~~~~~~~~~~~~d~~----~~~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 66 AVGGFNGSLRVRTVDSYDPV----KDQWTSV--ANMRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp EESCBCSSSBCCCEEEEETT----TTEEEEE--CCCSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred EEeCcCCCccccceEEECCC----CCceeeC--CCCCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 9999753 35789999999 8999999 789999999999998 999999999765 358899 99999987
Q ss_pred ccchhhccccccCCCCceEEEccCCcEEEEECC---------ceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecc
Q 044265 178 FPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND---------KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALE 248 (517)
Q Consensus 178 ~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~---------~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~ 248 (517)
.+.++.. .+.+..++.+++||++||. ++++||+.+++|+ .+++||. +|..+ +++.+
T Consensus 139 ~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~~---~~~~~--- 203 (302)
T 2xn4_A 139 VAPMNTR-------RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST-RRSGA---GVGVL--- 203 (302)
T ss_dssp ECCCSSC-------CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS-CCBSC---EEEEE---
T ss_pred cCCCCCc-------ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc-ccccc---cEEEE---
Confidence 6554432 2334666679999999982 4899999999998 4788885 45542 33333
Q ss_pred cCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCc
Q 044265 249 GDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGF 327 (517)
Q Consensus 249 ~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~ 327 (517)
+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.+++ .+++|||+||.+ +.
T Consensus 204 ----~~~iyv~GG~~~~---------~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~-~~--- 263 (302)
T 2xn4_A 204 ----NNLLYAVGGHDGP---------LVRKSVEVYDPT--TNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDD-GS--- 263 (302)
T ss_dssp ----TTEEEEECCBSSS---------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBC-SS---
T ss_pred ----CCEEEEECCCCCC---------cccceEEEEeCC--CCCEeeCCCCCCccccCeEEE-ECCEEEEECCcC-CC---
Confidence 8999999998632 135789999987 6899987 9999999988655 599999999976 21
Q ss_pred ccCCCCccccEEEeCCCCCCceeccCC-CCCccccccceeee
Q 044265 328 EMASNPCLFPVLYRPTQPAGLRFMTLN-PGTIPRMYHSTANL 368 (517)
Q Consensus 328 ~~~~~~~~~~e~YdP~t~~g~~W~~~~-~~~~~R~yhs~a~l 368 (517)
....++++|||+++ +|+.++ +|+.+|.+|+++++
T Consensus 264 ----~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~ 298 (302)
T 2xn4_A 264 ----CNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI 298 (302)
T ss_dssp ----SBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE
T ss_pred ----cccccEEEEcCCCC---eEEECCcccCcccccceEEEe
Confidence 12456899999999 999997 89999999987654
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=9.9e-36 Score=298.97 Aligned_cols=277 Identities=16% Similarity=0.134 Sum_probs=217.7
Q ss_pred cccceeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeec
Q 044265 19 AGISSMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQIL 98 (517)
Q Consensus 19 ~~~~~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l 98 (517)
...+.-|.++..+++||++||.. + . ....+++||+.+++|+.++.++..++...+++
T Consensus 12 ~~~~~~~~~~~~~~~i~v~GG~~-~---------~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 68 (308)
T 1zgk_A 12 GLVPRGSHAPKVGRLIYTAGGYF-R---------Q-------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV 68 (308)
T ss_dssp ---------CCCCCCEEEECCBS-S---------S-------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred CeeeCCccccCCCCEEEEEeCcC-C---------C-------------CcceEEEEcCCCCeEeECCCCCcccccceEEE
Confidence 45667788898999999999962 1 1 12358899999999999988887777777778
Q ss_pred CCCcEEEecCC----CC--CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCC----CceEE
Q 044265 99 ADGTVLQTGGD----LD--GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGA----NTVEY 168 (517)
Q Consensus 99 ~dG~l~v~GG~----~~--g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~----~~~E~ 168 (517)
.+++||++||. .. ..+.+++||+. +++|+++ .+|+.+|.+++++++ +|+|||+||.+. ..+|+
T Consensus 69 ~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~----~~~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 141 (308)
T 1zgk_A 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPM----TNQWSPC--APMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVER 141 (308)
T ss_dssp ETTEEEEECCEEEETTEEEECCCEEEEETT----TTEEEEC--CCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEE
T ss_pred ECCEEEEECCCcCCCCCCeecceEEEECCC----CCeEeEC--CCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEE
Confidence 89999999997 32 25789999999 8999999 789999999999998 999999999754 46899
Q ss_pred e-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-------CceEEEeCCCCeEEEecCCCCCCCCCCCCCC
Q 044265 169 Y-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-------DKAVMYDYETNKIAREYPPLDGGPRNYPSAG 240 (517)
Q Consensus 169 y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-------~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g 240 (517)
| |.+++|...+.++.. .+.+..++.+++||++|| +++++||+.+++|+ .+++||. +|..+
T Consensus 142 yd~~~~~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~~--- 209 (308)
T 1zgk_A 142 YEPERDEWHLVAPMLTR-------RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT-IRSGA--- 209 (308)
T ss_dssp EETTTTEEEECCCCSSC-------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS-CCBSC---
T ss_pred ECCCCCeEeECCCCCcc-------ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC-ccccc---
Confidence 9 999999876544332 233456667999999998 35899999999998 5888885 45542
Q ss_pred ceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcC
Q 044265 241 SSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIING 319 (517)
Q Consensus 241 ~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG 319 (517)
+++.+ +++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+++++ .+++|||+||
T Consensus 210 ~~~~~-------~~~iyv~GG~~~~---------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG 270 (308)
T 1zgk_A 210 GVCVL-------HNCIYAAGGYDGQ---------DQLNSVERYDVE--TETWTFVAPMKHRRSALGITV-HQGRIYVLGG 270 (308)
T ss_dssp EEEEE-------TTEEEEECCBCSS---------SBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred eEEEE-------CCEEEEEeCCCCC---------CccceEEEEeCC--CCcEEECCCCCCCccceEEEE-ECCEEEEEcC
Confidence 33333 8999999998632 136789999988 6899988 9999999998666 4999999999
Q ss_pred ccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceee
Q 044265 320 AQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTAN 367 (517)
Q Consensus 320 ~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ 367 (517)
.+ +. ....++++|||+++ +|+.+++|+.+|.+|++++
T Consensus 271 ~~-~~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~ 307 (308)
T 1zgk_A 271 YD-GH-------TFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAV 307 (308)
T ss_dssp BC-SS-------CBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEE
T ss_pred cC-CC-------cccceEEEEcCCCC---EEeecCCCCCCcccceeEe
Confidence 76 21 22447899999999 9999999999999998765
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=288.00 Aligned_cols=266 Identities=13% Similarity=0.124 Sum_probs=216.0
Q ss_pred CCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCC
Q 044265 31 FNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDL 110 (517)
Q Consensus 31 ~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~ 110 (517)
.++||++||... ...+++||+.+++|+.++.++..++.+.+++.+++||++||..
T Consensus 11 ~~~l~~~GG~~~-------------------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 65 (306)
T 3ii7_A 11 HDYRIALFGGSQ-------------------------PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ 65 (306)
T ss_dssp CCEEEEEECCSS-------------------------TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS
T ss_pred cceEEEEeCCCC-------------------------CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC
Confidence 478999998541 1247899999999999998888888888888999999999976
Q ss_pred C-CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCC-C----CceEEe-CCCCCceeccchhh
Q 044265 111 D-GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKG-A----NTVEYY-PPRNGAVSFPFLAD 183 (517)
Q Consensus 111 ~-g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~-~----~~~E~y-P~~~~w~~~~~l~~ 183 (517)
. ..+.+++||+. +++|.++ .+|+.+|..|+++++ +++|||+||.+ . ..+++| |.+++|...+.++.
T Consensus 66 ~~~~~~~~~~d~~----~~~W~~~--~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 138 (306)
T 3ii7_A 66 LFPIKRMDCYNVV----KDSWYSK--LGPPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT 138 (306)
T ss_dssp SSBCCEEEEEETT----TTEEEEE--ECCSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS
T ss_pred CCCcceEEEEeCC----CCeEEEC--CCCCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC
Confidence 2 35789999999 8999999 789999999999998 99999999976 2 468999 99999987655443
Q ss_pred ccccccCCCCceEEEccCCcEEEEEC-----------CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCcc
Q 044265 184 VEDKQMDNLYPYVHLLPNGHLFIFAN-----------DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFA 252 (517)
Q Consensus 184 t~~~~~~~~yp~~~~~~~G~iyv~Gg-----------~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~ 252 (517)
. .+.+..+..+++||++|| +++++||+.+++|+ .+++||. +|..+ +++.+
T Consensus 139 ~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~~---~~~~~------- 199 (306)
T 3ii7_A 139 Q-------RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIE-ARKNH---GLVFV------- 199 (306)
T ss_dssp C-------CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSS-CCBSC---EEEEE-------
T ss_pred C-------cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccc-hhhcc---eEEEE-------
Confidence 2 233456667999999997 24899999999998 5888885 45432 33333
Q ss_pred ccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCC
Q 044265 253 TAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMAS 331 (517)
Q Consensus 253 ~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~ 331 (517)
+++||++||.+... .++++++||+. +++|+.. +||.+|..+.++++ +++|||+||.+ +.
T Consensus 200 ~~~i~v~GG~~~~~---------~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~-~~------- 259 (306)
T 3ii7_A 200 KDKIFAVGGQNGLG---------GLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQ-GV------- 259 (306)
T ss_dssp TTEEEEECCEETTE---------EBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEE-TTEEEEEECBC-SS-------
T ss_pred CCEEEEEeCCCCCC---------CCceEEEeeCC--CCcEEECCCCCCCccceeEEEE-CCEEEEEeCcC-CC-------
Confidence 89999999986321 35778999988 6899998 99999999997665 99999999976 21
Q ss_pred CCccccEEEeCCCCCCceeccCCCCCccccccceeeecC
Q 044265 332 NPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLP 370 (517)
Q Consensus 332 ~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~ 370 (517)
.....+++|||+++ +|+.+++|+.+|.+|+++++..
T Consensus 260 ~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 260 GRLGHILEYNTETD---KWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp SBCCEEEEEETTTT---EEEEEEEEECCSCTTCEEEEEE
T ss_pred eeeeeEEEEcCCCC---eEEeCCCcccccceeEEEEECC
Confidence 12346899999999 9999999999999998777643
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=285.24 Aligned_cols=269 Identities=14% Similarity=0.145 Sum_probs=215.2
Q ss_pred eCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCC
Q 044265 30 RFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGD 109 (517)
Q Consensus 30 ~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~ 109 (517)
.+++||++||...+ +. ....+.+||+.+++|+.++.++..++..+++..+++||++||.
T Consensus 13 ~~~~i~~~GG~~~~--------~~-------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~ 71 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQ--------QS-------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGY 71 (301)
T ss_dssp CCEEEEEECCEETT--------TE-------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCEEEEEeCccCC--------Cc-------------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCC
Confidence 57899999993311 11 1236889999999999999887777777788889999999997
Q ss_pred CC--CCCeEEEecCCCCCCCCc---eEeccCccccCcCccceeEEcCCCcEEEEcCCCC----CceEEe-CCCCCceecc
Q 044265 110 LD--GYKKIRKFSPCEANGLCD---WVELDDVELVNGRWYGTDQILPDGSVIILGGKGA----NTVEYY-PPRNGAVSFP 179 (517)
Q Consensus 110 ~~--g~~~v~~ydp~~~~~t~~---W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~----~~~E~y-P~~~~w~~~~ 179 (517)
.. ..+.+++||+. +++ |+++ .+|+.+|..|+++++ +++||++||... ..+++| +.+++|...+
T Consensus 72 ~~~~~~~~~~~~d~~----~~~~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 144 (301)
T 2vpj_A 72 DGRSRLSSVECLDYT----ADEDGVWYSV--APMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG 144 (301)
T ss_dssp CSSCBCCCEEEEETT----CCTTCCCEEE--CCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred CCCccCceEEEEECC----CCCCCeeEEC--CCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECC
Confidence 53 25789999999 788 9999 789999999999998 999999999764 358899 9999998665
Q ss_pred chhhccccccCCCCceEEEccCCcEEEEEC-------CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCcc
Q 044265 180 FLADVEDKQMDNLYPYVHLLPNGHLFIFAN-------DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFA 252 (517)
Q Consensus 180 ~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-------~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~ 252 (517)
.++.. .+.+..+..+++||++|| +++++||+.+++|+ .+++||. +|..+ +++.+
T Consensus 145 ~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~~---~~~~~------- 205 (301)
T 2vpj_A 145 DMQTA-------REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT-KRSGA---GVALL------- 205 (301)
T ss_dssp ECSSC-------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS-CCBSC---EEEEE-------
T ss_pred CCCCC-------cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc-ccccc---eEEEE-------
Confidence 44322 233456667999999998 36899999999998 4788885 45432 33333
Q ss_pred ccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCC
Q 044265 253 TAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMAS 331 (517)
Q Consensus 253 ~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~ 331 (517)
+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||.+ +.
T Consensus 206 ~~~i~v~GG~~~~---------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~-~~------- 265 (301)
T 2vpj_A 206 NDHIYVVGGFDGT---------AHLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYD-GN------- 265 (301)
T ss_dssp TTEEEEECCBCSS---------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBC-SS-------
T ss_pred CCEEEEEeCCCCC---------cccceEEEEeCC--CCcEEECCCCCCcccceeEEEE-CCEEEEEcCcC-CC-------
Confidence 8999999998632 136788999987 6899987 99999999986665 99999999975 21
Q ss_pred CCccccEEEeCCCCCCceeccCCCCCccccccceeee
Q 044265 332 NPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANL 368 (517)
Q Consensus 332 ~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~l 368 (517)
.....+++|||+++ +|+.+++|+.+|..|+++++
T Consensus 266 ~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 266 SLLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp SBEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEE
T ss_pred cccccEEEEcCCCC---eEEEcCCCCcccccceEEEe
Confidence 23457899999999 99999999999999986654
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-32 Score=277.54 Aligned_cols=263 Identities=17% Similarity=0.198 Sum_probs=200.8
Q ss_pred EEEEECCCCCeEEcccc-CCCcccceeecCCCcEEEecCCC---CC-----CCeEEEecCCCCCCCCceEeccCccccCc
Q 044265 71 SAILDLQTNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDL---DG-----YKKIRKFSPCEANGLCDWVELDDVELVNG 141 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~---~g-----~~~v~~ydp~~~~~t~~W~~~~~~~m~~~ 141 (517)
+.+|||.+++|...+.. +..++.+++++.+++||++||.. ++ .+.+++||+. +++|.++ .+|+.+
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~----~~~W~~~--~~~p~~ 99 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV----SSEWVGL--PPLPSA 99 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT----TTEEEEC--SCBSSC
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC----CCcEEEC--CCCCcc
Confidence 67899999999985433 24566677788899999999953 11 1248999999 8999999 789999
Q ss_pred CccceeEEcCCCcEEEEcCCCC------CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC----
Q 044265 142 RWYGTDQILPDGSVIILGGKGA------NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND---- 210 (517)
Q Consensus 142 R~~~s~~~L~dG~v~vvGG~~~------~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~---- 210 (517)
|..|+++++ +++|||+||... .++++| +.+++|...+.++..+ +.+..++.+++||++||.
T Consensus 100 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-------~~~~~~~~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 100 RCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV-------YGHNVISHNGMIYCLGGKTDDK 171 (318)
T ss_dssp BCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE-------ESCEEEEETTEEEEECCEESSS
T ss_pred ccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc-------cccEEEEECCEEEEEcCCCCCC
Confidence 999999998 999999999752 358899 9999998665443322 334566689999999983
Q ss_pred ----ceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEec
Q 044265 211 ----KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIAT 286 (517)
Q Consensus 211 ----~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~ 286 (517)
++++||+.+++|+ .+++||. +|..+ +++.+ +++||++||.+... .++++++||+.
T Consensus 172 ~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~~---~~~~~-------~~~iyv~GG~~~~~---------~~~~~~~yd~~ 230 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWK-DLAPMKT-PRSMF---GVAIH-------KGKIVIAGGVTEDG---------LSASVEAFDLK 230 (318)
T ss_dssp CBCCCEEEEETTTTEEE-EECCCSS-CCBSC---EEEEE-------TTEEEEEEEEETTE---------EEEEEEEEETT
T ss_pred CccceEEEEcCCCCEEE-ECCCCCC-Ccccc---eEEEE-------CCEEEEEcCcCCCC---------ccceEEEEECC
Confidence 5899999999998 4888885 45543 33333 89999999986321 24678899987
Q ss_pred CCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcc-cCCCCccccEEEeCCCCCCceeccCCCCCccccccc
Q 044265 287 SADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFE-MASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHS 364 (517)
Q Consensus 287 ~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~-~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs 364 (517)
+++|+.. +||.+|..+.+++ .+++|||+||........+ ........+++|||+++ +|+.+ ++.+|..|+
T Consensus 231 --~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~~~~ 302 (318)
T 2woz_A 231 --TNKWEVMTEFPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGM--LKEIRYASG 302 (318)
T ss_dssp --TCCEEECCCCSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT---EEEEE--ESCCGGGTT
T ss_pred --CCeEEECCCCCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC---Eehhh--ccccccccc
Confidence 6899998 9999999998665 5999999999762110000 00122456899999999 99998 889999998
Q ss_pred eeeecCCCcEEEec
Q 044265 365 TANLLPDGRVLIAG 378 (517)
Q Consensus 365 ~a~ll~dG~V~v~G 378 (517)
++++ +++||+..
T Consensus 303 ~~~~--~~~iyi~~ 314 (318)
T 2woz_A 303 ASCL--ATRLNLFK 314 (318)
T ss_dssp CEEE--EEEEEGGG
T ss_pred ceee--CCEEEEEE
Confidence 7654 89999874
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5.6e-32 Score=271.61 Aligned_cols=257 Identities=16% Similarity=0.198 Sum_probs=200.6
Q ss_pred CcccceeecCCCcEEEecCCCC-CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCC----CC-
Q 044265 90 TWCSSGQILADGTVLQTGGDLD-GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGK----GA- 163 (517)
Q Consensus 90 ~~c~~~~~l~dG~l~v~GG~~~-g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~----~~- 163 (517)
.++...++..+++||++||... ..+.+++||+. +++|.++ .+|+.+|.+++++++ +++||++||. +.
T Consensus 14 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~----~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 86 (308)
T 1zgk_A 14 VPRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS----NGTWLRL--ADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGN 86 (308)
T ss_dssp -------CCCCCCEEEECCBSSSBCCCEEEEETT----TTEEEEC--CCCSSCCBSCEEEEE-TTEEEEECCEEEETTEE
T ss_pred eeCCccccCCCCEEEEEeCcCCCCcceEEEEcCC----CCeEeEC--CCCCcccccceEEEE-CCEEEEECCCcCCCCCC
Confidence 3455556678999999999732 35789999999 8999999 789999999999988 9999999998 32
Q ss_pred ---CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-------CceEEEeCCCCeEEEecCCCCCC
Q 044265 164 ---NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-------DKAVMYDYETNKIAREYPPLDGG 232 (517)
Q Consensus 164 ---~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-------~~~~~ydp~t~~w~~~~p~~p~~ 232 (517)
..+++| |.+++|...+.++.. .+.+..++.+|+||++|| +++++||+.+++|+ .+++||.
T Consensus 87 ~~~~~~~~~d~~~~~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~- 157 (308)
T 1zgk_A 87 TDSSALDCYNPMTNQWSPCAPMSVP-------RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPMLT- 157 (308)
T ss_dssp EECCCEEEEETTTTEEEECCCCSSC-------CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCSS-
T ss_pred eecceEEEECCCCCeEeECCCCCcC-------ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCCc-
Confidence 468899 999999876554432 233456667999999998 46899999999998 5888885
Q ss_pred CCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecC
Q 044265 233 PRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPT 311 (517)
Q Consensus 233 ~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpd 311 (517)
+|..+ +++++ +++||++||.+... .++++++||+. +++|+.. +|+.+|..++++++ +
T Consensus 158 ~r~~~---~~~~~-------~~~iyv~GG~~~~~---------~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~ 215 (308)
T 1zgk_A 158 RRIGV---GVAVL-------NRLLYAVGGFDGTN---------RLNSAECYYPE--RNEWRMITAMNTIRSGAGVCVL-H 215 (308)
T ss_dssp CCBSC---EEEEE-------TTEEEEECCBCSSC---------BCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-T
T ss_pred cccce---EEEEE-------CCEEEEEeCCCCCC---------cCceEEEEeCC--CCeEeeCCCCCCccccceEEEE-C
Confidence 45442 34443 89999999986321 36789999987 6899988 99999999987665 9
Q ss_pred CcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCccccccCCCC
Q 044265 312 GDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEF 391 (517)
Q Consensus 312 G~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~ 391 (517)
++|||+||.. +. .....+++|||+++ +|+.+++++.+|..|++++ .+++|||+||.... ..
T Consensus 216 ~~iyv~GG~~-~~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~------~~ 276 (308)
T 1zgk_A 216 NCIYAAGGYD-GQ-------DQLNSVERYDVETE---TWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGH------TF 276 (308)
T ss_dssp TEEEEECCBC-SS-------SBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSS------CB
T ss_pred CEEEEEeCCC-CC-------CccceEEEEeCCCC---cEEECCCCCCCccceEEEE--ECCEEEEEcCcCCC------cc
Confidence 9999999986 21 12456899999999 9999999999999998665 49999999996432 11
Q ss_pred CCceeeEEEeCCcc
Q 044265 392 PTELRIEAFSPEYL 405 (517)
Q Consensus 392 ~~~~~vE~y~P~yl 405 (517)
..++|+|+|..-
T Consensus 277 --~~~v~~yd~~~~ 288 (308)
T 1zgk_A 277 --LDSVECYDPDTD 288 (308)
T ss_dssp --CCEEEEEETTTT
T ss_pred --cceEEEEcCCCC
Confidence 457999999764
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7.2e-33 Score=278.84 Aligned_cols=265 Identities=15% Similarity=0.128 Sum_probs=203.1
Q ss_pred eEEEEECCCCCeEEcccc-CCCcccceeecCCCcEEEecCCC----C-C---CCeEEEecCCCCCCCCceEeccCccccC
Q 044265 70 HSAILDLQTNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDL----D-G---YKKIRKFSPCEANGLCDWVELDDVELVN 140 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~----~-g---~~~v~~ydp~~~~~t~~W~~~~~~~m~~ 140 (517)
.+.+|||.+++|+..... +..++.+++++.+++||++||.. . . .+.+++||+. +++|+++ .+|+.
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~----~~~W~~~--~~~p~ 87 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL----DSEWLGM--PPLPS 87 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT----TTEEEEC--CCBSS
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC----CCeEEEC--CCCCc
Confidence 377999999999873322 33566677778899999999952 1 1 2358999999 8999999 78999
Q ss_pred cCccceeEEcCCCcEEEEcCCC----C---CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--
Q 044265 141 GRWYGTDQILPDGSVIILGGKG----A---NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND-- 210 (517)
Q Consensus 141 ~R~~~s~~~L~dG~v~vvGG~~----~---~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~-- 210 (517)
+|..|+++++ +++|||+||.+ . .++++| |.+++|...+.++.. .+.+..++.+++||++||.
T Consensus 88 ~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 88 PRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-------VYGHTVLSHMDLVYVIGGKGS 159 (315)
T ss_dssp CEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-------CBSCEEEEETTEEEEECCBCT
T ss_pred chhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-------ccceeEEEECCEEEEEeCCCC
Confidence 9999999998 99999999963 1 468999 999999876554432 2445666789999999984
Q ss_pred ------ceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEE
Q 044265 211 ------KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRII 284 (517)
Q Consensus 211 ------~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id 284 (517)
++++||+.+++|+ .+++||. +|..+ +++.+ +++||++||.+... .++++++||
T Consensus 160 ~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~~---~~~~~-------~~~iyv~GG~~~~~---------~~~~~~~yd 218 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWK-ELAPMQT-ARSLF---GATVH-------DGRIIVAAGVTDTG---------LTSSAEVYS 218 (315)
T ss_dssp TSCBCCCEEEEETTTTEEE-ECCCCSS-CCBSC---EEEEE-------TTEEEEEEEECSSS---------EEEEEEEEE
T ss_pred CCcccceEEEEeCCCCeEE-ECCCCCC-chhce---EEEEE-------CCEEEEEeccCCCC---------ccceEEEEE
Confidence 6899999999998 5888885 45543 33333 89999999986321 356789999
Q ss_pred ecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcc--cCCCCccccEEEeCCCCCCceeccCCCCCcccc
Q 044265 285 ATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFE--MASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRM 361 (517)
Q Consensus 285 ~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~--~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~ 361 (517)
+. +++|+.. +||.+|..++++++ +++|||+||.+ +..... ........+++|||+++ +|+.+ ++.+|.
T Consensus 219 ~~--~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~-~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~ 289 (315)
T 4asc_A 219 IT--DNKWAPFEAFPQERSSLSLVSL-VGTLYAIGGFA-TLETESGELVPTELNDIWRYNEEEK---KWEGV--LREIAY 289 (315)
T ss_dssp TT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEE-EEECTTSCEEEEEEEEEEEEETTTT---EEEEE--ESCSSC
T ss_pred CC--CCeEEECCCCCCcccceeEEEE-CCEEEEECCcc-ccCcCCccccccccCcEEEecCCCC---hhhhh--ccCCcC
Confidence 87 6899988 99999999986664 99999999975 210000 00012346899999999 99998 778899
Q ss_pred ccceeeecCCCcEEEecCC
Q 044265 362 YHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 362 yhs~a~ll~dG~V~v~GG~ 380 (517)
.|++++ .++++++....
T Consensus 290 ~~~~~~--~~~~l~v~~~~ 306 (315)
T 4asc_A 290 AAGATF--LPVRLNVLRLT 306 (315)
T ss_dssp CSSCEE--EEEEECGGGSE
T ss_pred ccceEE--eCCEEEEEEeh
Confidence 998665 48999988653
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=268.16 Aligned_cols=251 Identities=16% Similarity=0.222 Sum_probs=198.2
Q ss_pred cCCCcEEEecCCCC-CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCC----CceEEe-CC
Q 044265 98 LADGTVLQTGGDLD-GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGA----NTVEYY-PP 171 (517)
Q Consensus 98 l~dG~l~v~GG~~~-g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~----~~~E~y-P~ 171 (517)
..+++||++||... ..+++++||+. +++|.++ .+|+.+|.+|+++++ +++||++||.+. ..+++| |.
T Consensus 13 ~~~~~i~v~GG~~~~~~~~~~~~d~~----~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~ 85 (302)
T 2xn4_A 13 NLPKLMVVVGGQAPKAIRSVECYDFK----EERWHQV--AELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPV 85 (302)
T ss_dssp --CEEEEEECCBSSSBCCCEEEEETT----TTEEEEE--CCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETT
T ss_pred CCCCEEEEECCCCCCCCCcEEEEcCc----CCcEeEc--ccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCC
Confidence 35789999999753 35789999999 8899999 789999999999888 999999999764 468899 99
Q ss_pred CCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-------CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceee
Q 044265 172 RNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-------DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAM 244 (517)
Q Consensus 172 ~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-------~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~ 244 (517)
+++|...+.++.. .+.+.+++.+++||++|| +++++||+.+++|. .+++||. +|..+ +++.
T Consensus 86 ~~~W~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~~---~~~~ 153 (302)
T 2xn4_A 86 KDQWTSVANMRDR-------RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT-RRSSV---GVGV 153 (302)
T ss_dssp TTEEEEECCCSSC-------CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS-CCBSC---EEEE
T ss_pred CCceeeCCCCCcc-------ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC-cccCc---eEEE
Confidence 9999976655432 233566667999999998 36899999999998 4888885 45542 3333
Q ss_pred eecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCC
Q 044265 245 LALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAG 323 (517)
Q Consensus 245 l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g 323 (517)
+ +++||++||.+.... ..++++++||+. +++|+.. +|+.+|..+++++ .+++|||+||.+ +
T Consensus 154 ~-------~~~iyv~GG~~~~~~-------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~-~ 215 (302)
T 2xn4_A 154 V-------GGLLYAVGGYDVASR-------QCLSTVECYNAT--TNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHD-G 215 (302)
T ss_dssp E-------TTEEEEECCEETTTT-------EECCCEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBS-S
T ss_pred E-------CCEEEEEeCCCCCCC-------ccccEEEEEeCC--CCcEEECCCCccccccccEEE-ECCEEEEECCCC-C
Confidence 3 899999999863210 136789999988 6899987 9999999998665 599999999976 2
Q ss_pred CCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCccccccCCCCCCceeeEEEeCC
Q 044265 324 TQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEFPTELRIEAFSPE 403 (517)
Q Consensus 324 ~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~~~~~~vE~y~P~ 403 (517)
. .....+++|||+++ +|+.+++|+.+|..|++++ .+++|||+||.... . ...++|+|+|.
T Consensus 216 ~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~------~--~~~~v~~yd~~ 275 (302)
T 2xn4_A 216 P-------LVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGS------C--NLASVEYYNPT 275 (302)
T ss_dssp S-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSS------S--BCCCEEEEETT
T ss_pred C-------cccceEEEEeCCCC---CEeeCCCCCCccccCeEEE--ECCEEEEECCcCCC------c--ccccEEEEcCC
Confidence 1 12346899999999 9999999999999997654 49999999996432 1 13579999998
Q ss_pred cc
Q 044265 404 YL 405 (517)
Q Consensus 404 yl 405 (517)
.-
T Consensus 276 ~~ 277 (302)
T 2xn4_A 276 TD 277 (302)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=267.11 Aligned_cols=250 Identities=16% Similarity=0.136 Sum_probs=198.5
Q ss_pred CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCC---CceEEe-CCCCCc
Q 044265 100 DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGA---NTVEYY-PPRNGA 175 (517)
Q Consensus 100 dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~---~~~E~y-P~~~~w 175 (517)
.+.||++||... .+.+++|||. +++|.++ .+|+.+|.+|+++++ +++||++||.+. ..+++| |.+++|
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~----~~~W~~~--~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK----DYSWTDI--RCPFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT----TTEEEEC--CCCSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEE
T ss_pred cceEEEEeCCCC-CceEEEecCC----CCCEecC--CCCCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeE
Confidence 378999999864 7899999999 8999999 789999999999998 999999999762 467889 999999
Q ss_pred eeccchhhccccccCCCCceEEEccCCcEEEEECC--------ceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeec
Q 044265 176 VSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--------KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLAL 247 (517)
Q Consensus 176 ~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--------~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~ 247 (517)
...+.++.. .+.+..++.+++||++||. ++++||+.+++|+ .+++||. +|..+ +++.+
T Consensus 83 ~~~~~~p~~-------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~~---~~~~~-- 148 (306)
T 3ii7_A 83 YSKLGPPTP-------RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT-QRCSH---GMVEA-- 148 (306)
T ss_dssp EEEECCSSC-------CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS-CCBSC---EEEEE--
T ss_pred EECCCCCcc-------ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC-Cccee---EEEEE--
Confidence 866554432 2335666679999999983 4899999999998 4888886 45442 33333
Q ss_pred ccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCC
Q 044265 248 EGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQG 326 (517)
Q Consensus 248 ~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g 326 (517)
+++||++||....... ...++++++||+. +++|+.. +|+.+|..|+++++ +++|||+||.+. .
T Consensus 149 -----~~~iyv~GG~~~~~~~-----~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~-- 212 (306)
T 3ii7_A 149 -----NGLIYVCGGSLGNNVS-----GRVLNSCEVYDPA--TETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNG-L-- 212 (306)
T ss_dssp -----TTEEEEECCEESCTTT-----CEECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEET-T--
T ss_pred -----CCEEEEECCCCCCCCc-----ccccceEEEeCCC--CCeEEECCCccchhhcceEEEE-CCEEEEEeCCCC-C--
Confidence 8999999998632110 0126789999998 6899988 99999999997665 999999999762 1
Q ss_pred cccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCccccccCCCCCCceeeEEEeCCcc
Q 044265 327 FEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEFPTELRIEAFSPEYL 405 (517)
Q Consensus 327 ~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~~~~~~vE~y~P~yl 405 (517)
.....+++|||+++ +|+.+++++.+|..|+++++ +++|||+||.... .. ..++++|+|..-
T Consensus 213 -----~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~------~~--~~~~~~yd~~~~ 273 (306)
T 3ii7_A 213 -----GGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGV------GR--LGHILEYNTETD 273 (306)
T ss_dssp -----EEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSS------SB--CCEEEEEETTTT
T ss_pred -----CCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCC------ee--eeeEEEEcCCCC
Confidence 12346899999999 99999999999999986654 9999999996532 11 347999999774
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=259.01 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=196.9
Q ss_pred CCCcEEEecC-CCC--CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCC----CceEEe-C
Q 044265 99 ADGTVLQTGG-DLD--GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGA----NTVEYY-P 170 (517)
Q Consensus 99 ~dG~l~v~GG-~~~--g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~----~~~E~y-P 170 (517)
.+++||++|| ... ..+.+++||+. +++|..+ .+|+.+|.+++++.+ +++||++||.+. ..+++| +
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~----~~~W~~~--~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~ 85 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK----TQEWSFL--PSITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDY 85 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT----TTEEEEC--CCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEET
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC----CCeEEeC--CCCChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEEC
Confidence 5789999999 432 25789999999 8999999 689999999999888 899999999764 368889 9
Q ss_pred CCCC---ceeccchhhccccccCCCCceEEEccCCcEEEEEC-------CceEEEeCCCCeEEEecCCCCCCCCCCCCCC
Q 044265 171 PRNG---AVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-------DKAVMYDYETNKIAREYPPLDGGPRNYPSAG 240 (517)
Q Consensus 171 ~~~~---w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-------~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g 240 (517)
.+++ |...+.++.. .+.+..+..+++||++|| +++++||+.+++|+. +++||. +|..+
T Consensus 86 ~~~~~~~W~~~~~~p~~-------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~-~r~~~--- 153 (301)
T 2vpj_A 86 TADEDGVWYSVAPMNVR-------RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSM-LGDMQT-AREGA--- 153 (301)
T ss_dssp TCCTTCCCEEECCCSSC-------CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEE-EEECSS-CCBSC---
T ss_pred CCCCCCeeEECCCCCCC-------ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEE-CCCCCC-Ccccc---
Confidence 9888 9876554432 233456667999999998 368999999999984 788885 45432
Q ss_pred ceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcC
Q 044265 241 SSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIING 319 (517)
Q Consensus 241 ~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG 319 (517)
+++.+ +++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+++++ .+++|||+||
T Consensus 154 ~~~~~-------~~~iyv~GG~~~~---------~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG 214 (301)
T 2vpj_A 154 GLVVA-------SGVIYCLGGYDGL---------NILNSVEKYDPH--TGHWTNVTPMATKRSGAGVAL-LNDHIYVVGG 214 (301)
T ss_dssp EEEEE-------TTEEEEECCBCSS---------CBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred eEEEE-------CCEEEEECCCCCC---------cccceEEEEeCC--CCcEEeCCCCCcccccceEEE-ECCEEEEEeC
Confidence 33333 8999999998632 136789999988 6899987 9999999998666 5999999999
Q ss_pred ccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCccccccCCCCCCceeeEE
Q 044265 320 AQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEFPTELRIEA 399 (517)
Q Consensus 320 ~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~~~~~~vE~ 399 (517)
.. +. ....++++||++++ +|+.+++++.+|..|+++++ +++||++||.... . ...++|+
T Consensus 215 ~~-~~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~------~--~~~~v~~ 273 (301)
T 2vpj_A 215 FD-GT-------AHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGN------S--LLSSIEC 273 (301)
T ss_dssp BC-SS-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSS------S--BEEEEEE
T ss_pred CC-CC-------cccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCC------c--ccccEEE
Confidence 86 21 12346899999999 99999999999999976553 9999999996432 1 1457999
Q ss_pred EeCCcc
Q 044265 400 FSPEYL 405 (517)
Q Consensus 400 y~P~yl 405 (517)
|+|..-
T Consensus 274 yd~~~~ 279 (301)
T 2vpj_A 274 YDPIID 279 (301)
T ss_dssp EETTTT
T ss_pred EcCCCC
Confidence 999763
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=1.3e-30 Score=266.72 Aligned_cols=261 Identities=14% Similarity=0.088 Sum_probs=188.9
Q ss_pred ccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCC-
Q 044265 84 LMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGK- 161 (517)
Q Consensus 84 l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~- 161 (517)
++.++..++.+.+++.+++|||+||.. .+.+++||+.+. +++|.++ .+|+ .+|.+|+++++ +++|||+||.
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~d~~~~--~~~W~~~--~~~p~~~R~~~~~~~~-~~~lyv~GG~~ 75 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSA--GTAWYKLDTQAK--DKKWTAL--AAFPGGPRDQATSAFI-DGNLYVFGGIG 75 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGG--TTCEEEEETTSS--SCCEEEC--CCCTTCCCBSCEEEEE-TTEEEEECCEE
T ss_pred CCCCCccccceEEEEECCEEEEEeCcC--CCeEEEEccccC--CCCeeEC--CCCCCCcCccceEEEE-CCEEEEEcCCC
Confidence 455667777777777799999999975 368999999721 4899999 7899 89999999998 8999999998
Q ss_pred C--------CCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-----------------------
Q 044265 162 G--------ANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN----------------------- 209 (517)
Q Consensus 162 ~--------~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg----------------------- 209 (517)
+ ...+++| |.+++|...+.+. +...+.+..++.+++||++||
T Consensus 76 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
T 2uvk_A 76 KNSEGLTQVFNDVHKYNPKTNSWVKLMSHA------PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAI 149 (357)
T ss_dssp ECTTSCEEECCCEEEEETTTTEEEECSCCC------SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCccceeeccEEEEeCCCCcEEECCCCC------CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccch
Confidence 2 1468999 9999998765443 112344555668999999998
Q ss_pred ------------------CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccC
Q 044265 210 ------------------DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRS 271 (517)
Q Consensus 210 ------------------~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~ 271 (517)
+++++||+.+++|+. +++||..++.. .+++.+ +++||++||.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~~~~~---~~~~~~-------~~~iyv~GG~~~~~----- 213 (357)
T 2uvk_A 150 DKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSY-AGESPWYGTAG---AAVVNK-------GDKTWLINGEAKPG----- 213 (357)
T ss_dssp HHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEE-EEECSSCCCBS---CEEEEE-------TTEEEEECCEEETT-----
T ss_pred hhhhhhhccccccccCCcccEEEEeCCCCcEEE-CCCCCCCCccc---ccEEEE-------CCEEEEEeeecCCC-----
Confidence 368999999999985 77777532321 233332 89999999975321
Q ss_pred CCCCCCCceeEEEecCCCCCceec-CCCcce--eeeeeEEecCCcEEEEcCccCCCCC--c-------ccCCCCccccEE
Q 044265 272 TDTPAHGSCGRIIATSADPTWEME-DMPFGR--IMGDMVMLPTGDVLIINGAQAGTQG--F-------EMASNPCLFPVL 339 (517)
Q Consensus 272 ~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R--~~~~~v~lpdG~v~v~GG~~~g~~g--~-------~~~~~~~~~~e~ 339 (517)
..++.+++||+...+++|+.. +|+.+| ..++++ +.+++|||+||....... + ......+.++++
T Consensus 214 ---~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 289 (357)
T 2uvk_A 214 ---LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAG-ISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDI 289 (357)
T ss_dssp ---EECCCEEEEECC---CEEEECCCSSTTTCCBSCEEE-EETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEE
T ss_pred ---cccCceEEEEecCCCCcEEecCCCCCCcccccceEE-EECCEEEEEcCccccCCcccccccceeccccccceeeEEE
Confidence 135667888873337899987 887665 455544 469999999997521000 0 001123457899
Q ss_pred EeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 340 YRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 340 YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
|||+++ +|+.+++++.+|.+|++++ .+++|||+||...
T Consensus 290 yd~~~~---~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 290 HLWHNG---KWDKSGELSQGRAYGVSLP--WNNSLLIIGGETA 327 (357)
T ss_dssp EECC------CEEEEECSSCCBSSEEEE--ETTEEEEEEEECG
T ss_pred EecCCC---ceeeCCCCCCCcccceeEE--eCCEEEEEeeeCC
Confidence 999999 9999999999999997654 5999999999654
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=1.5e-29 Score=258.72 Aligned_cols=281 Identities=16% Similarity=0.182 Sum_probs=198.9
Q ss_pred cccCcccceeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECC--CCCeEEccccC-CCc
Q 044265 15 VLADAGISSMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQ--TNQIRPLMILT-DTW 91 (517)
Q Consensus 15 ~~~~~~~~~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~--t~~w~~l~~~~-~~~ 91 (517)
++++...+..|++++.+++||++||... ..+.+||+. +++|+.++.++ ..+
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~--------------------------~~~~~~d~~~~~~~W~~~~~~p~~~R 56 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG--------------------------TAWYKLDTQAKDKKWTALAAFPGGPR 56 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGT--------------------------TCEEEEETTSSSCCEEECCCCTTCCC
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCC--------------------------CeEEEEccccCCCCeeECCCCCCCcC
Confidence 3333344556888878999999999641 136799998 49999999888 677
Q ss_pred ccceeecCCCcEEEecCC-C--C----CCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCC
Q 044265 92 CSSGQILADGTVLQTGGD-L--D----GYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGA 163 (517)
Q Consensus 92 c~~~~~l~dG~l~v~GG~-~--~----g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~ 163 (517)
+..++++.+++|||+||. . + ..+.+++||+. +++|+++ .+|+ .+|..++++++ +++|||+||.+.
T Consensus 57 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~----~~~W~~~--~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 129 (357)
T 2uvk_A 57 DQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK----TNSWVKL--MSHAPMGMAGHVTFVH-NGKAYVTGGVNQ 129 (357)
T ss_dssp BSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT----TTEEEEC--SCCCSSCCSSEEEEEE-TTEEEEEECCCH
T ss_pred ccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC----CCcEEEC--CCCCCcccccceEEEE-CCEEEEEeCcCC
Confidence 777778889999999998 2 1 25789999999 8999999 6788 99999998887 999999999752
Q ss_pred --------------------------------------CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcE
Q 044265 164 --------------------------------------NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHL 204 (517)
Q Consensus 164 --------------------------------------~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~i 204 (517)
..+++| |.+++|...+.++.. ..+.+..++.+++|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~------~~~~~~~~~~~~~i 203 (357)
T 2uvk_A 130 NIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWY------GTAGAAVVNKGDKT 203 (357)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSC------CCBSCEEEEETTEE
T ss_pred CcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCC------CcccccEEEECCEE
Confidence 468999 999999865443321 12324666679999
Q ss_pred EEEECC--------ceEEEeC--CCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCccc----cc
Q 044265 205 FIFAND--------KAVMYDY--ETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFI----QR 270 (517)
Q Consensus 205 yv~Gg~--------~~~~ydp--~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~----~~ 270 (517)
|++||. .+++||+ .+++|+ .+++||. +|... .++++++ +++||++||....... ..
T Consensus 204 yv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~-~~~~~-~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~g 273 (357)
T 2uvk_A 204 WLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSS-PDGVA-GGFAGIS-------NDSLIFAGGAGFKGSRENYQNG 273 (357)
T ss_dssp EEECCEEETTEECCCEEEEECC---CEEE-ECCCSST-TTCCB-SCEEEEE-------TTEEEEECCEECTTHHHHHHTT
T ss_pred EEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCC-Ccccc-cceEEEE-------CCEEEEEcCccccCCccccccc
Confidence 999983 4678876 999998 4777764 33221 1233333 8999999997421100 00
Q ss_pred CC----CCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCC
Q 044265 271 ST----DTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQP 345 (517)
Q Consensus 271 ~~----~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~ 345 (517)
.. ....+.++++||+. +++|+.. +||.+|..+.+++ .+++|||+||.+.. .....++++|+.+++
T Consensus 274 ~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~-------~~~~~~v~~l~~~~~ 343 (357)
T 2uvk_A 274 KNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRAYGVSLP-WNNSLLIIGGETAG-------GKAVTDSVLITVKDN 343 (357)
T ss_dssp CSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEE-ETTEEEEEEEECGG-------GCEEEEEEEEEC-CC
T ss_pred ceeccccccceeeEEEEecC--CCceeeCCCCCCCcccceeEE-eCCEEEEEeeeCCC-------CCEeeeEEEEEEcCc
Confidence 00 00123578899988 6899998 9999999988655 59999999998621 112356889999999
Q ss_pred CCceeccCCCCC
Q 044265 346 AGLRFMTLNPGT 357 (517)
Q Consensus 346 ~g~~W~~~~~~~ 357 (517)
+|.+..+.+
T Consensus 344 ---~~~~~~~~~ 352 (357)
T 2uvk_A 344 ---KVTVQNLEH 352 (357)
T ss_dssp ---SCEEEC---
T ss_pred ---EeEeeeccc
Confidence 998775543
No 14
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=1.7e-29 Score=279.73 Aligned_cols=293 Identities=15% Similarity=0.180 Sum_probs=206.5
Q ss_pred EEEEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCCC--------CCCeEEEecCCCCCCCCceEeccCccccCc
Q 044265 71 SAILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDLD--------GYKKIRKFSPCEANGLCDWVELDDVELVNG 141 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~--------g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~ 141 (517)
.+.|||.+++|+++..++.. ..+.++++ +|+||++||... +...+++|||. +++|+++ ..|+.+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~-~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~----t~~w~~~--~~~~~~ 240 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV-PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS----TGIVSDR--TVTVTK 240 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC-CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT----TCCBCCC--EEEECS
T ss_pred cccCCCCCCeeeeeccCCCC-ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC----CCcEEeC--cccCCC
Confidence 55789999999998876653 33445555 999999999752 12478999999 8999998 678877
Q ss_pred Cccc--eeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--------C
Q 044265 142 RWYG--TDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--------D 210 (517)
Q Consensus 142 R~~~--s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--------~ 210 (517)
|..+ +++++.||+||++||.+..++++| |.+++|...+.|+.. +.++.+++++||+||++|| +
T Consensus 241 ~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~------R~~~s~~~~~dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 241 HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA------RGYQSSATMSDGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC------CSSCEEEECTTSCEEEECCCCCSSSCCC
T ss_pred CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc------ccccceEEecCCeEEEEeCcccCCcccc
Confidence 7554 466777999999999887789999 999999976655432 3566666667999999999 4
Q ss_pred ceEEEeCCCCeEEEecC-----CCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEe
Q 044265 211 KAVMYDYETNKIAREYP-----PLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIA 285 (517)
Q Consensus 211 ~~~~ydp~t~~w~~~~p-----~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~ 285 (517)
++|+||+++++|+. ++ +|+. .+. .+++. .++++|++||.+...+. ...++.+++||+
T Consensus 315 ~~e~yd~~t~~W~~-~~~~~~~p~~~-~~~----~~~~~-------~~~~iyv~Gg~~g~~~~-----~~~~~~v~~yd~ 376 (656)
T 1k3i_A 315 NGEVYSPSSKTWTS-LPNAKVNPMLT-ADK----QGLYR-------SDNHAWLFGWKKGSVFQ-----AGPSTAMNWYYT 376 (656)
T ss_dssp CEEEEETTTTEEEE-ETTSCSGGGCC-CCT----TGGGT-------TTCSCCEEECGGGCEEE-----CCSSSEEEEEEC
T ss_pred cceEeCCCCCccee-CCCcccccccc-ccc----cceee-------cCCceEEEECCCCcEEE-----ecCccceeeeec
Confidence 68999999999984 53 3332 121 12221 28999999998632111 013567899998
Q ss_pred cCCCCCceec--CCCc------ceeeeeeEEe--cCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCC-
Q 044265 286 TSADPTWEME--DMPF------GRIMGDMVML--PTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLN- 354 (517)
Q Consensus 286 ~~~~~~W~~~--~m~~------~R~~~~~v~l--pdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~- 354 (517)
. .++|... .++. +|..+.++++ .+++|||+||... ..+. ...+....+++|||+++ +|+.+.
T Consensus 377 ~--~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~-~~~~-~~~~~~~~v~~yd~~~~---~W~~~~~ 449 (656)
T 1k3i_A 377 S--GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD-YQDS-DATTNAHIITLGEPGTS---PNTVFAS 449 (656)
T ss_dssp S--TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS-SSSS-BCCCCEEEEECCSTTSC---CEEEECT
T ss_pred C--CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC-CCCC-CcCCcceEEEcCCCCCC---CeeEEcc
Confidence 8 5777643 3332 2445554542 4899999999752 1110 11122336899999999 999886
Q ss_pred -CCCccccccceeeecCCCcEEEecCCCccccccCCCCCCceeeEEEeCCc
Q 044265 355 -PGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEFPTELRIEAFSPEY 404 (517)
Q Consensus 355 -~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~~~~~~vE~y~P~y 404 (517)
+|+.+|..|+ +++++||+|||+||..... .+.+.. ...++|+|+|..
T Consensus 450 ~~mp~~R~~~~-~~~l~~g~i~v~GG~~~~~-~~~~~~-~~~~v~~ydp~t 497 (656)
T 1k3i_A 450 NGLYFARTFHT-SVVLPDGSTFITGGQRRGI-PFEDST-PVFTPEIYVPEQ 497 (656)
T ss_dssp TCCSSCCBSCE-EEECTTSCEEEECCBSBCC-TTCCCS-BCCCCEEEEGGG
T ss_pred CCCCCCcccCC-eEECCCCCEEEECCcccCc-CcCCCC-cccceEEEcCCC
Confidence 9999999996 4557999999999965321 011111 145799999976
No 15
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=4.7e-29 Score=250.93 Aligned_cols=249 Identities=13% Similarity=0.076 Sum_probs=188.9
Q ss_pred CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc--cCcCccceeEEcCCCcEEEEcCCC----C------CceE
Q 044265 100 DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL--VNGRWYGTDQILPDGSVIILGGKG----A------NTVE 167 (517)
Q Consensus 100 dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m--~~~R~~~s~~~L~dG~v~vvGG~~----~------~~~E 167 (517)
...|+++|| +.+.+|||. +++|... +| +.+|..++++++ +++||++||.. . ..++
T Consensus 4 ~~~l~~~GG-----~~~~~yd~~----~~~W~~~---~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~ 70 (315)
T 4asc_A 4 QDLIFMISE-----EGAVAYDPA----ANECYCA---SLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFL 70 (315)
T ss_dssp EEEEEEEET-----TEEEEEETT----TTEEEEE---ECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEE
T ss_pred ceEEEEEcC-----CceEEECCC----CCeEecC---CCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceE
Confidence 347889999 579999999 8999863 45 558999998887 99999999951 1 1267
Q ss_pred Ee-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC----------CceEEEeCCCCeEEEecCCCCCCCCCC
Q 044265 168 YY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN----------DKAVMYDYETNKIAREYPPLDGGPRNY 236 (517)
Q Consensus 168 ~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg----------~~~~~ydp~t~~w~~~~p~~p~~~r~~ 236 (517)
+| |.+++|..++.++..| +.+..++.+++||++|| +++++||+.+++|+ .+++||. +|..
T Consensus 71 ~~d~~~~~W~~~~~~p~~r-------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~ 141 (315)
T 4asc_A 71 QFDHLDSEWLGMPPLPSPR-------CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPY-VVYG 141 (315)
T ss_dssp EEETTTTEEEECCCBSSCE-------ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSS-CCBS
T ss_pred EecCCCCeEEECCCCCcch-------hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCC-cccc
Confidence 88 9999998766554332 23456667999999999 24899999999998 5888886 4544
Q ss_pred CCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEE
Q 044265 237 PSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVL 315 (517)
Q Consensus 237 ~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~ 315 (517)
+ +++.+ +++||++||...+. ..++++++||+. +++|+.. +||.+|..|+++++ +++||
T Consensus 142 ~---~~~~~-------~~~iyv~GG~~~~~--------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iy 200 (315)
T 4asc_A 142 H---TVLSH-------MDLVYVIGGKGSDR--------KCLNKMCVYDPK--KFEWKELAPMQTARSLFGATVH-DGRII 200 (315)
T ss_dssp C---EEEEE-------TTEEEEECCBCTTS--------CBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-TTEEE
T ss_pred e---eEEEE-------CCEEEEEeCCCCCC--------cccceEEEEeCC--CCeEEECCCCCCchhceEEEEE-CCEEE
Confidence 2 33333 89999999984222 246889999988 6899998 99999999997665 99999
Q ss_pred EEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCccccccCCCC--CC
Q 044265 316 IINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEF--PT 393 (517)
Q Consensus 316 v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~--~~ 393 (517)
|+||... . .....+++|||+++ +|+.+++++.+|..|++++ .+++|||+||...... ..+.+ ..
T Consensus 201 v~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~-~~~~~~~~~ 266 (315)
T 4asc_A 201 VAAGVTD-T-------GLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLET-ESGELVPTE 266 (315)
T ss_dssp EEEEECS-S-------SEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEEC-TTSCEEEEE
T ss_pred EEeccCC-C-------CccceEEEEECCCC---eEEECCCCCCcccceeEEE--ECCEEEEECCccccCc-CCccccccc
Confidence 9999762 1 12447899999999 9999999999999997665 4999999999643100 00110 01
Q ss_pred ceeeEEEeCCcc
Q 044265 394 ELRIEAFSPEYL 405 (517)
Q Consensus 394 ~~~vE~y~P~yl 405 (517)
..++|+|+|..-
T Consensus 267 ~~~v~~yd~~~~ 278 (315)
T 4asc_A 267 LNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEETTTT
T ss_pred cCcEEEecCCCC
Confidence 357999999864
No 16
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=9.5e-29 Score=249.01 Aligned_cols=251 Identities=13% Similarity=0.068 Sum_probs=187.6
Q ss_pred CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCC----C------CceEEe
Q 044265 100 DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKG----A------NTVEYY 169 (517)
Q Consensus 100 dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~----~------~~~E~y 169 (517)
++.||++||. .+++|||. +++|... +.+.+.+|..++++++ +++||++||.. . ..+++|
T Consensus 15 ~~~i~~~GG~-----~~~~yd~~----~~~W~~~-~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 15 KDLILLVNDT-----AAVAYDPM----ENECYLT-ALAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEECSS-----EEEEEETT----TTEEEEE-EECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEE
T ss_pred cchhhhcccc-----ceEEECCC----CCceecc-cCCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEE
Confidence 5689999994 48999999 8999885 2223368988887776 99999999952 1 126788
Q ss_pred -CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC---------ceEEEeCCCCeEEEecCCCCCCCCCCCCC
Q 044265 170 -PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND---------KAVMYDYETNKIAREYPPLDGGPRNYPSA 239 (517)
Q Consensus 170 -P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~---------~~~~ydp~t~~w~~~~p~~p~~~r~~~~~ 239 (517)
|.+++|...+.++..| +.+..++.+++||++||. ++++||+.+++|+ .+++||. +|..+
T Consensus 84 d~~~~~W~~~~~~p~~r-------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~~-- 152 (318)
T 2woz_A 84 DNVSSEWVGLPPLPSAR-------CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI-KVYGH-- 152 (318)
T ss_dssp ETTTTEEEECSCBSSCB-------CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS-CEESC--
T ss_pred eCCCCcEEECCCCCccc-------cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC-ccccc--
Confidence 9999998765554322 334666679999999983 4899999999998 4788885 45432
Q ss_pred CceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEc
Q 044265 240 GSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIIN 318 (517)
Q Consensus 240 g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~G 318 (517)
+++.+ +++||++||...+. ..++++++||+. +++|+.. +|+.+|..|++++ .+++|||+|
T Consensus 153 -~~~~~-------~~~iyv~GG~~~~~--------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~G 213 (318)
T 2woz_A 153 -NVISH-------NGMIYCLGGKTDDK--------KCTNRVFIYNPK--KGDWKDLAPMKTPRSMFGVAI-HKGKIVIAG 213 (318)
T ss_dssp -EEEEE-------TTEEEEECCEESSS--------CBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEEE
T ss_pred -EEEEE-------CCEEEEEcCCCCCC--------CccceEEEEcCC--CCEEEECCCCCCCcccceEEE-ECCEEEEEc
Confidence 33332 89999999975221 246789999998 6899988 9999999999666 599999999
Q ss_pred CccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCccccccCCCC--CCcee
Q 044265 319 GAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEF--PTELR 396 (517)
Q Consensus 319 G~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~--~~~~~ 396 (517)
|... . .....+++|||+++ +|+.+++++.+|..|++++ .+++||++||...... ..+.. .....
T Consensus 214 G~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~-~~~~~~~~~~~~ 279 (318)
T 2woz_A 214 GVTE-D-------GLSASVEAFDLKTN---KWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQL-ESKEFAPTEVND 279 (318)
T ss_dssp EEET-T-------EEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC-----CCBCCBCCC
T ss_pred CcCC-C-------CccceEEEEECCCC---eEEECCCCCCcccceEEEE--ECCEEEEECCeeccCC-CCceeccceeee
Confidence 9762 1 12346899999999 9999999999999997654 4899999999653210 00110 01347
Q ss_pred eEEEeCCcc
Q 044265 397 IEAFSPEYL 405 (517)
Q Consensus 397 vE~y~P~yl 405 (517)
+++|+|...
T Consensus 280 v~~yd~~~~ 288 (318)
T 2woz_A 280 IWKYEDDKK 288 (318)
T ss_dssp EEEEETTTT
T ss_pred EEEEeCCCC
Confidence 999999764
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.94 E-value=1.2e-25 Score=250.17 Aligned_cols=262 Identities=12% Similarity=0.099 Sum_probs=182.8
Q ss_pred eEEccccCCCcccceeecCCCcEEEecCCCC-CCCeEEEecCCCCCCCCceEecc-C---ccccCcCccceeEEcC-CCc
Q 044265 81 IRPLMILTDTWCSSGQILADGTVLQTGGDLD-GYKKIRKFSPCEANGLCDWVELD-D---VELVNGRWYGTDQILP-DGS 154 (517)
Q Consensus 81 w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~-g~~~v~~ydp~~~~~t~~W~~~~-~---~~m~~~R~~~s~~~L~-dG~ 154 (517)
|...+..+.++. ++++..+++||++||... ..+.+++||+. +++|+.++ + ..|+.+|++|+++++. +|+
T Consensus 379 ~~~~~~~p~rr~-g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~----~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ 453 (695)
T 2zwa_A 379 LLECECPINRKF-GDVDVAGNDVFYMGGSNPYRVNEILQLSIH----YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ 453 (695)
T ss_dssp EEECCCTTCCBS-CEEEECSSCEEEECCBSSSBCCCEEEEEEC----SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE
T ss_pred EeccCCCCCCce-eEEEEECCEEEEECCCCCCCcCcEEEEECC----CCeEEEeccCCCCCCCCccccceEEEEEccCCE
Confidence 443333344443 344458999999999753 35789999999 89999982 1 1389999999999997 899
Q ss_pred EEEEcCCCC-----CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC----ceEEEeCCCCeEEE
Q 044265 155 VIILGGKGA-----NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND----KAVMYDYETNKIAR 224 (517)
Q Consensus 155 v~vvGG~~~-----~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~----~~~~ydp~t~~w~~ 224 (517)
|||+||.+. .++++| +.+++|...+.++..+ ..+.++++.+|+||++||. ++++||+.+++|+.
T Consensus 454 lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R------~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 454 LLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR------FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKD 527 (695)
T ss_dssp EEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC------BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred EEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc------ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEE
Confidence 999999864 358999 9999999765544322 2333444359999999995 79999999999984
Q ss_pred ecCC---CCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCC------ceec
Q 044265 225 EYPP---LDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPT------WEME 295 (517)
Q Consensus 225 ~~p~---~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~------W~~~ 295 (517)
+++ +|. +|..+ +++++.. ..++||++||...... ..++++++||+. +++ |+..
T Consensus 528 -~~~~g~~p~-~r~~~---~a~v~~~----~~~~iyv~GG~~~~~~-------~~~~~v~~yd~~--~~~w~~~~~W~~~ 589 (695)
T 2zwa_A 528 -VTPKDEFFQ-NSLVS---AGLEFDP----VSKQGIILGGGFMDQT-------TVSDKAIIFKYD--AENATEPITVIKK 589 (695)
T ss_dssp -CCCSSGGGG-SCCBS---CEEEEET----TTTEEEEECCBCTTSS-------CBCCEEEEEEEC--TTCSSCCEEEEEE
T ss_pred -ccCCCCCCC-cccce---eEEEEeC----CCCEEEEECCcCCCCC-------eeeCcEEEEEcc--CCccccceEEEEc
Confidence 665 553 34432 3233311 0289999999853210 246789999998 567 8876
Q ss_pred -CC-CcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCc--------cccccce
Q 044265 296 -DM-PFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTI--------PRMYHST 365 (517)
Q Consensus 296 -~m-~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~--------~R~yhs~ 365 (517)
+| +.+|..|+++++-||+|||+||.. +.. .......+++|||+++ +|+.+. ++. .|..|+
T Consensus 590 ~~~p~~~R~~~~~~~~~~~~iyv~GG~~-~~~----~~~~~~~v~~yd~~t~---~W~~~~-~p~~~~~~~~p~~~gh~- 659 (695)
T 2zwa_A 590 LQHPLFQRYGSQIKYITPRKLLIVGGTS-PSG----LFDRTNSIISLDPLSE---TLTSIP-ISRRIWEDHSLMLAGFS- 659 (695)
T ss_dssp EECGGGCCBSCEEEEEETTEEEEECCBC-SSC----CCCTTTSEEEEETTTT---EEEECC-CCHHHHHHSCCCCSSCE-
T ss_pred CCCCCCCcccceEEEeCCCEEEEECCcc-CCC----CCCCCCeEEEEECCCC---eEEEee-ccccccCCCCccceeee-
Confidence 66 589999997776339999999975 211 0123457899999999 998542 221 244576
Q ss_pred eeecCCCcEEEecCCC
Q 044265 366 ANLLPDGRVLIAGSNP 381 (517)
Q Consensus 366 a~ll~dG~V~v~GG~~ 381 (517)
++++.||+|||+||..
T Consensus 660 ~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 660 LVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EECC---CEEEECCEE
T ss_pred EEEeCCCEEEEEeCCc
Confidence 4556788999999964
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=9.3e-25 Score=242.99 Aligned_cols=255 Identities=15% Similarity=0.114 Sum_probs=179.9
Q ss_pred ceEEcccCcccceeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEcc-c---
Q 044265 11 TWELVLADAGISSMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLM-I--- 86 (517)
Q Consensus 11 ~W~~~~~~~~~~~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~-~--- 86 (517)
+|.... ..+.+..|+++..+++||++||... . ....+.+||+.+++|+.+. .
T Consensus 378 ~~~~~~-~~p~rr~g~~~~~~~~iyv~GG~~~--~---------------------~~~~v~~yd~~~~~W~~~~~~~p~ 433 (695)
T 2zwa_A 378 QLLECE-CPINRKFGDVDVAGNDVFYMGGSNP--Y---------------------RVNEILQLSIHYDKIDMKNIEVSS 433 (695)
T ss_dssp EEEECC-CTTCCBSCEEEECSSCEEEECCBSS--S---------------------BCCCEEEEEECSSCEEEEECCCCC
T ss_pred eEeccC-CCCCCceeEEEEECCEEEEECCCCC--C---------------------CcCcEEEEECCCCeEEEeccCCCC
Confidence 344443 2333444444448999999999642 1 1235889999999999987 4
Q ss_pred --cCCCcccceeecC--CCcEEEecCCCC---CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEc
Q 044265 87 --LTDTWCSSGQILA--DGTVLQTGGDLD---GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILG 159 (517)
Q Consensus 87 --~~~~~c~~~~~l~--dG~l~v~GG~~~---g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvG 159 (517)
++..++.+.++.. +|+|||+||... ..+.+++||+. +++|+.+ .+|+.+|++|+++++.+|+|||+|
T Consensus 434 ~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~----t~~W~~~--~~~p~~R~~h~~~~~~~~~iyv~G 507 (695)
T 2zwa_A 434 SEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK----TREWSMI--KSLSHTRFRHSACSLPDGNVLILG 507 (695)
T ss_dssp SCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT----TTEEEEC--CCCSBCCBSCEEEECTTSCEEEEC
T ss_pred CCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC----CCcEEEC--CCCCCCcccceEEEEcCCEEEEEC
Confidence 4555555555555 999999999864 25789999999 8999999 789999999999997799999999
Q ss_pred CCCCC-ceEEe-CCCCCceeccc---hhhccccccCCCCceEEEccC---CcEEEEECC---------ceEEEeCCCCe-
Q 044265 160 GKGAN-TVEYY-PPRNGAVSFPF---LADVEDKQMDNLYPYVHLLPN---GHLFIFAND---------KAVMYDYETNK- 221 (517)
Q Consensus 160 G~~~~-~~E~y-P~~~~w~~~~~---l~~t~~~~~~~~yp~~~~~~~---G~iyv~Gg~---------~~~~ydp~t~~- 221 (517)
|.+.. .+++| |.+++|...+. ++.. .+.+.+++.+ ++||++||. ++++||+.+++
T Consensus 508 G~~~~~~v~~yd~~t~~W~~~~~~g~~p~~-------r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w 580 (695)
T 2zwa_A 508 GVTEGPAMLLYNVTEEIFKDVTPKDEFFQN-------SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENA 580 (695)
T ss_dssp CBCSSCSEEEEETTTTEEEECCCSSGGGGS-------CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCS
T ss_pred CCCCCCCEEEEECCCCceEEccCCCCCCCc-------ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCcc
Confidence 98654 68999 99999986543 2222 2223333334 899999983 48999999999
Q ss_pred -----EEEecCCCCCCCCCCCCCCceeeeecccCccc-cEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec
Q 044265 222 -----IAREYPPLDGGPRNYPSAGSSAMLALEGDFAT-AVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME 295 (517)
Q Consensus 222 -----w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~-gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~ 295 (517)
|.. ++++|..+|..+ +++++ + ++|||+||.+.... ....+++++||+. +++|+..
T Consensus 581 ~~~~~W~~-~~~~p~~~R~~~---~~~~~-------~~~~iyv~GG~~~~~~------~~~~~~v~~yd~~--t~~W~~~ 641 (695)
T 2zwa_A 581 TEPITVIK-KLQHPLFQRYGS---QIKYI-------TPRKLLIVGGTSPSGL------FDRTNSIISLDPL--SETLTSI 641 (695)
T ss_dssp SCCEEEEE-EEECGGGCCBSC---EEEEE-------ETTEEEEECCBCSSCC------CCTTTSEEEEETT--TTEEEEC
T ss_pred ccceEEEE-cCCCCCCCcccc---eEEEe-------CCCEEEEECCccCCCC------CCCCCeEEEEECC--CCeEEEe
Confidence 874 555432245432 33443 6 99999999753211 0246789999988 6899965
Q ss_pred CCCcc--------eeeeeeEEecCCcEEEEcCcc
Q 044265 296 DMPFG--------RIMGDMVMLPTGDVLIINGAQ 321 (517)
Q Consensus 296 ~m~~~--------R~~~~~v~lpdG~v~v~GG~~ 321 (517)
+++.. |..|+++++.+|+|||+||..
T Consensus 642 ~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 642 PISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp CCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred eccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 55432 456777777777999999964
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.44 E-value=0.00023 Score=69.42 Aligned_cols=247 Identities=9% Similarity=0.081 Sum_probs=133.5
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-CccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~~s~~ 148 (517)
.+.+||..+++.......+..........++|+++++|+.+ ..+++||.. +.+-.. .+... ..-.+++
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~----~~~~~~----~~~~~~~~v~~~~ 114 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVS----SGKCLK----TLKGHSNYVFCCN 114 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----TCCEEE----EEECCSSCEEEEE
T ss_pred eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECC----CCcEEE----EEcCCCCCEEEEE
Confidence 37789998888766555555445556677899999999874 689999987 333221 12211 2233456
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAR 224 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~ 224 (517)
..++++.++.|+.+ ..+.+| ..+.+.. .... . . ..-..+...++|++++.|+ ..+.+||..+++...
T Consensus 115 ~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~---~----~-~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 115 FNPQSNLIVSGSFD-ESVRIWDVKTGKCLKTLPA---H----S-DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 185 (312)
T ss_dssp ECSSSSEEEEEETT-SCEEEEETTTCCEEEEECC---C----S-SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred EcCCCCEEEEEeCC-CcEEEEECCCCEEEEEecC---C----C-CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 67789998888866 457777 4443321 1110 0 0 0011244557899888886 458899999887654
Q ss_pred ecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceee
Q 044265 225 EYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIM 303 (517)
Q Consensus 225 ~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~ 303 (517)
.+.. . ...+ -..+.+. .+++.+++|+.+. . +..+|+.......... ........
T Consensus 186 ~~~~--~--~~~~--~~~~~~~-----~~~~~l~~~~~d~-~-------------i~iwd~~~~~~~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 186 TLID--D--DNPP--VSFVKFS-----PNGKYILAATLDN-T-------------LKLWDYSKGKCLKTYTGHKNEKYCI 240 (312)
T ss_dssp EECC--S--SCCC--EEEEEEC-----TTSSEEEEEETTT-E-------------EEEEETTTTEEEEEECSSCCSSSCC
T ss_pred EEec--c--CCCc--eEEEEEC-----CCCCEEEEEcCCC-e-------------EEEEECCCCcEEEEEEecCCceEEE
Confidence 3311 0 1111 1112222 1677888887652 1 2234432110000001 01111111
Q ss_pred eeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCcee-ccCCCCCccccccceeeecCCCcEEEecCC
Q 044265 304 GDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRF-MTLNPGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 304 ~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
......+++++++.|+.+ | .+.+||..+. +- ..+.. +..... ....-|+++++++++.
T Consensus 241 ~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~---~~~~~~~~-h~~~v~--~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 241 FANFSVTGGKWIVSGSED-N------------LVYIWNLQTK---EIVQKLQG-HTDVVI--STACHPTENIIASAAL 299 (312)
T ss_dssp CEEEECSSSCEEEECCTT-S------------CEEEEETTTC---CEEEEECC-CSSCEE--EEEECSSSSEEEEEEC
T ss_pred EEEEEeCCCcEEEEECCC-C------------EEEEEECCCc---hhhhhhhc-cCCcEE--EEeecCcCCceEEEEc
Confidence 112334688899988765 3 3688998876 32 12211 111111 2334689999988863
No 20
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.38 E-value=0.00031 Score=69.60 Aligned_cols=245 Identities=9% Similarity=0.037 Sum_probs=134.0
Q ss_pred eEEEEECCCCCeEEcc--ccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCccce
Q 044265 70 HSAILDLQTNQIRPLM--ILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~--~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~~s 146 (517)
.+.+||..+++..... ..+.....+..+.+++.+++.|+.+ ..+++||.. +.+-... +.. .....+
T Consensus 59 ~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~----~~~~~~~----~~~~~~~~~~ 127 (321)
T 3ow8_A 59 LVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE----NGKQIKS----IDAGPVDAWT 127 (321)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT----TTEEEEE----EECCTTCCCC
T ss_pred CEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC----CCCEEEE----EeCCCccEEE
Confidence 3678887666543321 2333333344566789999999875 689999987 3332221 111 112335
Q ss_pred eEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEE
Q 044265 147 DQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 147 ~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
++.-+||+.++.|+.+ ..+.+| .....-.. . +... ......+...++|+.++.|+ ..+.+||..+++-.
T Consensus 128 ~~~spdg~~l~~g~~d-g~v~i~~~~~~~~~~-~-~~~~-----~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~ 199 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHV-GKVNIFGVESGKKEY-S-LDTR-----GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 199 (321)
T ss_dssp EEECTTSSEEEEECTT-SEEEEEETTTCSEEE-E-EECS-----SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEcCC-CcEEEEEcCCCceeE-E-ecCC-----CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 6777899999998865 456777 33322210 0 0000 00111345568999999886 46889999998765
Q ss_pred EecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCccee
Q 044265 224 REYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRI 302 (517)
Q Consensus 224 ~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~ 302 (517)
..+ .+. ..+- -+....| +++++++|+.+. . +..+|+.. ...... .-.....
T Consensus 200 ~~~---~~h--~~~v-~~l~~sp------d~~~l~s~s~dg-~-------------i~iwd~~~--~~~~~~~~~h~~~v 251 (321)
T 3ow8_A 200 HTL---EGH--AMPI-RSLTFSP------DSQLLVTASDDG-Y-------------IKIYDVQH--ANLAGTLSGHASWV 251 (321)
T ss_dssp EEE---CCC--SSCC-CEEEECT------TSCEEEEECTTS-C-------------EEEEETTT--CCEEEEECCCSSCE
T ss_pred EEE---ccc--CCce-eEEEEcC------CCCEEEEEcCCC-e-------------EEEEECCC--cceeEEEcCCCCce
Confidence 444 211 1110 1122222 788899988762 1 23344331 111111 1111122
Q ss_pred eeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceec-cCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 303 MGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFM-TLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 303 ~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
. +....|||+.++.|+.+ + ++.+||..+. +-. .+... .... ......+||+.+++||.+
T Consensus 252 ~-~~~~sp~~~~l~s~s~D-~------------~v~iwd~~~~---~~~~~~~~h-~~~v--~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 252 L-NVAFCPDDTHFVSSSSD-K------------SVKVWDVGTR---TCVHTFFDH-QDQV--WGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp E-EEEECTTSSEEEEEETT-S------------CEEEEETTTT---EEEEEECCC-SSCE--EEEEECTTSSEEEEEETT
T ss_pred E-EEEECCCCCEEEEEeCC-C------------cEEEEeCCCC---EEEEEEcCC-CCcE--EEEEECCCCCEEEEEeCC
Confidence 2 22445899999998765 2 3689998876 321 11111 1111 123457899999999865
No 21
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.37 E-value=0.00011 Score=73.23 Aligned_cols=252 Identities=14% Similarity=0.146 Sum_probs=131.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-CccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~~s~~ 148 (517)
.+.+||..+++-......+.......++.++|+.+++||.+ ..+++||.... ....... ..+... ..-.++.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~~~--~~~~~~~--~~~~~h~~~v~~~~ 150 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLKTR--EGNVRVS--RELAGHTGYLSCCR 150 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETTTC--SBSCEEE--EEEECCSSCEEEEE
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECccC--CCcceeE--EEecCCCccEEEEE
Confidence 47899988877554334444444456677899999999975 68999998631 1122211 122221 1222334
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEe
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIARE 225 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~ 225 (517)
..++++ ++.|+.+ .++.+| ..+..... . +.. +. ..-..+...++|++++.|+ ..+.+||..+++-...
T Consensus 151 ~~~~~~-l~s~s~d-~~i~~wd~~~~~~~~-~-~~~----h~-~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 151 FLDDNQ-IVTSSGD-TTCALWDIETGQQTT-T-FTG----HT-GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221 (340)
T ss_dssp EEETTE-EEEEETT-SCEEEEETTTTEEEE-E-ECC----CS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred ECCCCc-EEEEECC-CcEEEEECCCCcEEE-E-EcC----CC-CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence 455666 4555543 467777 44332211 0 110 00 0111345567999999887 4688999988765543
Q ss_pred cCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeee
Q 044265 226 YPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMG 304 (517)
Q Consensus 226 ~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~ 304 (517)
+ .+. .... -+....| +++.+++|+.+. . +..+|+.......... .-......
T Consensus 222 ~---~~h-~~~v--~~v~~~p------~~~~l~s~s~d~-~-------------v~iwd~~~~~~~~~~~~~~~~~~v~- 274 (340)
T 1got_B 222 F---TGH-ESDI--NAICFFP------NGNAFATGSDDA-T-------------CRLFDLRADQELMTYSHDNIICGIT- 274 (340)
T ss_dssp E---CCC-SSCE--EEEEECT------TSSEEEEEETTS-C-------------EEEEETTTTEEEEEECCTTCCSCEE-
T ss_pred E---cCC-cCCE--EEEEEcC------CCCEEEEEcCCC-c-------------EEEEECCCCcEEEEEccCCcccceE-
Confidence 3 111 1100 0122222 688888888762 1 2234433110000000 00001111
Q ss_pred eeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 305 DMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 305 ~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
....-|||+++++|+.+ | .+.+||..+.. .-..+... ..+. .+....+||+.+++||.+.
T Consensus 275 ~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~--~~~~~~~h-~~~v--~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 275 SVSFSKSGRLLLAGYDD-F------------NCNVWDALKAD--RAGVLAGH-DNRV--SCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEECTTSSEEEEEETT-S------------EEEEEETTTCC--EEEEEECC-SSCE--EEEEECTTSSCEEEEETTS
T ss_pred EEEECCCCCEEEEECCC-C------------eEEEEEcccCc--EeeEeecC-CCcE--EEEEEcCCCCEEEEEcCCc
Confidence 22345899999998765 2 36889987651 21122111 1111 1234568999999998653
No 22
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.23 E-value=0.00051 Score=66.89 Aligned_cols=246 Identities=11% Similarity=0.128 Sum_probs=132.6
Q ss_pred eEEEEECCCCCeE----Eccc-cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCc
Q 044265 70 HSAILDLQTNQIR----PLMI-LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRW 143 (517)
Q Consensus 70 ~~~~yDp~t~~w~----~l~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~ 143 (517)
.+.+||..+++.. .+.. .+........+.++++.+++|+.+ ..+.+||.. +.+.... ..+.. ...
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~----~~~~~~~--~~~~~~~~~ 143 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLA----APTPRIK--AELTSSAPA 143 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECC----CC--EEE--EEEECSSSC
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECC----CCCccee--eecccCCCc
Confidence 4778998776432 1111 233334455677899999998864 689999987 4443322 22222 222
Q ss_pred cceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCC
Q 044265 144 YGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~ 220 (517)
-.+.+..++++.+++|+.+ ..+.+| ..+.+... .+... ...-..+...++|+.+++++ ..+.+||..+.
T Consensus 144 i~~~~~~~~~~~l~~~~~d-g~v~~~d~~~~~~~~--~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSD-GNIAVWDLHNQTLVR--QFQGH-----TDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp EEEEEECTTSSEEEEEETT-SCEEEEETTTTEEEE--EECCC-----SSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEECCCCCEEEEEeCC-CcEEEEeCCCCceee--eeecc-----cCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 3455677799998988865 356777 44332211 01000 00111345567898888876 35789999988
Q ss_pred eEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcc
Q 044265 221 KIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFG 300 (517)
Q Consensus 221 ~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~ 300 (517)
+-..... .+. .. ......| +++.+++|+.+. .+..+|+... ...+. .-...
T Consensus 216 ~~~~~~~-~~~--~v----~~~~~s~------~~~~l~~~~~~~--------------~i~~~~~~~~-~~~~~-~~~~~ 266 (337)
T 1gxr_A 216 RQLQQHD-FTS--QI----FSLGYCP------TGEWLAVGMESS--------------NVEVLHVNKP-DKYQL-HLHES 266 (337)
T ss_dssp EEEEEEE-CSS--CE----EEEEECT------TSSEEEEEETTS--------------CEEEEETTSS-CEEEE-CCCSS
T ss_pred ceEeeec-CCC--ce----EEEEECC------CCCEEEEEcCCC--------------cEEEEECCCC-CeEEE-cCCcc
Confidence 7654331 111 10 1122222 678888887542 1334444321 11111 11112
Q ss_pred eeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCC
Q 044265 301 RIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 301 R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
... .....+||+.+++++.+ | .+.+||..+. +-... ......- ....+.+||+.+++|+.
T Consensus 267 ~v~-~~~~~~~~~~l~~~~~d-g------------~i~~~~~~~~---~~~~~--~~~~~~v-~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 267 CVL-SLKFAYCGKWFVSTGKD-N------------LLNAWRTPYG---ASIFQ--SKESSSV-LSCDISVDDKYIVTGSG 326 (337)
T ss_dssp CEE-EEEECTTSSEEEEEETT-S------------EEEEEETTTC---CEEEE--EECSSCE-EEEEECTTSCEEEEEET
T ss_pred cee-EEEECCCCCEEEEecCC-C------------cEEEEECCCC---eEEEE--ecCCCcE-EEEEECCCCCEEEEecC
Confidence 222 23455899999988764 2 3688998876 33211 1111111 12345789999999886
Q ss_pred C
Q 044265 381 P 381 (517)
Q Consensus 381 ~ 381 (517)
+
T Consensus 327 d 327 (337)
T 1gxr_A 327 D 327 (337)
T ss_dssp T
T ss_pred C
Confidence 5
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.20 E-value=0.00051 Score=68.92 Aligned_cols=254 Identities=13% Similarity=0.122 Sum_probs=133.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+.+.......+..+....++.++|..+++||.+ ..+.+|+.........-... ..+. ....-.+++
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~~~~~~~~~~~~--~~~~~h~~~v~~~~ 161 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLTFDKNENMAAKK--KSVAMHTNYLSACS 161 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECCCCTTCCSGGGC--EEEEECSSCEEEEE
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEeccccccccccc--eeeeccCCcEEEEE
Confidence 47899988877665444455555556778999999999975 67888886521000000000 1111 122233455
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEcc--CCcEEEEEC--CceEEEeCCCCeEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLP--NGHLFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~--~G~iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
..++++.++.|+.+ .++.+| ..+.+... . +.. +... -....+.+ +|++++.|+ ..+.+||..+++..
T Consensus 162 ~~~~~~~l~t~s~D-~~v~lwd~~~~~~~~-~-~~~----h~~~-v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 162 FTNSDMQILTASGD-GTCALWDVESGQLLQ-S-FHG----HGAD-VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV 233 (354)
T ss_dssp ECSSSSEEEEEETT-SEEEEEETTTCCEEE-E-EEC----CSSC-EEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE
T ss_pred EeCCCCEEEEEeCC-CcEEEEeCCCCeEEE-E-EcC----CCCC-eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 66788777777654 567788 54433221 0 100 0000 00123334 578888886 46889999988766
Q ss_pred EecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCce-ecCCCccee
Q 044265 224 REYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWE-MEDMPFGRI 302 (517)
Q Consensus 224 ~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~-~~~m~~~R~ 302 (517)
..+. .. ...- .+....| +++.+++|+.+. . +..+|+.. .+-. .........
T Consensus 234 ~~~~---~h-~~~v--~~v~~~p------~~~~l~s~s~D~-~-------------v~lwd~~~--~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 234 QAFE---TH-ESDV--NSVRYYP------SGDAFASGSDDA-T-------------CRLYDLRA--DREVAIYSKESIIF 285 (354)
T ss_dssp EEEC---CC-SSCE--EEEEECT------TSSEEEEEETTS-C-------------EEEEETTT--TEEEEEECCTTCCS
T ss_pred EEec---CC-CCCe--EEEEEeC------CCCEEEEEeCCC-e-------------EEEEECCC--CcEEEEEcCCCccc
Confidence 4431 11 1100 1122222 678888888762 1 23344331 1100 001000000
Q ss_pred -eeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 303 -MGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 303 -~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
-.....-++|+++++|+.+ + .+.+||..+. +.-..+.. + ...-.+....|||+.+++|+.+
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~--~~~~~l~~-h--~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYND-Y------------TINVWDVLKG--SRVSILFG-H--ENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp CEEEEEECTTSSEEEEEETT-S------------CEEEEETTTC--SEEEEECC-C--SSCEEEEEECTTSSCEEEEETT
T ss_pred ceeEEEEeCCCCEEEEEECC-C------------cEEEEECCCC--ceEEEEEC-C--CCcEEEEEECCCCCEEEEEcCC
Confidence 1122344799999998764 2 3689998765 12222211 1 1111234457999999999865
Q ss_pred c
Q 044265 382 H 382 (517)
Q Consensus 382 ~ 382 (517)
.
T Consensus 348 ~ 348 (354)
T 2pbi_B 348 H 348 (354)
T ss_dssp S
T ss_pred C
Confidence 3
No 24
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.18 E-value=0.00058 Score=67.73 Aligned_cols=152 Identities=11% Similarity=0.039 Sum_probs=91.6
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccc--cCCCcccceeecCCCcE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMI--LTDTWCSSGQILADGTV 103 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~dG~l 103 (517)
+..-++|+.++.++.+ | .+.+||..++++..+.. .+........+.++|++
T Consensus 14 ~~~s~~~~~l~~~~~d----------~-----------------~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 66 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNN----------H-----------------EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 66 (372)
T ss_dssp EEECTTSSEEEEECSS----------S-----------------EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTE
T ss_pred EEECCCCCEEEEEeCC----------C-----------------EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCE
Confidence 3455789988887532 2 47789998887655443 23333344556789999
Q ss_pred EEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCC-CCceeccc
Q 044265 104 LQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPR-NGAVSFPF 180 (517)
Q Consensus 104 ~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~-~~w~~~~~ 180 (517)
+++|+.+ ..+++||.. +.++... ..+ .....-.+++..++|+.+++|+.+ ..+.+| ... ..+.....
T Consensus 67 l~~~~~d---g~i~vwd~~----~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~v~i~d~~~~~~~~~~~~ 136 (372)
T 1k8k_C 67 IVTCGTD---RNAYVWTLK----GRTWKPT--LVILRINRAARCVRWAPNEKKFAVGSGS-RVISICYFEQENDWWVCKH 136 (372)
T ss_dssp EEEEETT---SCEEEEEEE----TTEEEEE--EECCCCSSCEEEEEECTTSSEEEEEETT-SSEEEEEEETTTTEEEEEE
T ss_pred EEEEcCC---CeEEEEECC----CCeeeee--EEeecCCCceeEEEECCCCCEEEEEeCC-CEEEEEEecCCCcceeeee
Confidence 9999864 579999987 5665543 222 223334556677899999988865 456666 332 22321111
Q ss_pred hhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCC
Q 044265 181 LADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYE 218 (517)
Q Consensus 181 l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~ 218 (517)
+... + ...-..+...++++.++.|+ ..+.+||..
T Consensus 137 ~~~~---~-~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 137 IKKP---I-RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp ECTT---C-CSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred eecc---c-CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 1000 0 01111344567899888886 457889954
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.18 E-value=0.0015 Score=64.82 Aligned_cols=270 Identities=14% Similarity=0.038 Sum_probs=140.2
Q ss_pred ceEEEEECCCCCeEEccc----c-C-CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC
Q 044265 69 AHSAILDLQTNQIRPLMI----L-T-DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR 142 (517)
Q Consensus 69 ~~~~~yDp~t~~w~~l~~----~-~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R 142 (517)
..+.+||++|+++...-. . . ..+.. ...+.++++|++... ...+.++|+. +.+-... +....
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~-~i~~~~~~lyv~~~~---~~~v~viD~~----t~~~~~~----i~~~~ 84 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQ-SMVIRDGIGWIVVNN---SHVIFAIDIN----TFKEVGR----ITGFT 84 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEE-EEEEETTEEEEEEGG---GTEEEEEETT----TCCEEEE----EECCS
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccce-EEEEECCEEEEEEcC---CCEEEEEECc----ccEEEEE----cCCCC
Confidence 368899999999875321 0 0 01122 233467889888753 3689999998 5554321 22122
Q ss_pred ccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEE---CCceEEEeC
Q 044265 143 WYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA---NDKAVMYDY 217 (517)
Q Consensus 143 ~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G---g~~~~~ydp 217 (517)
.-..++..+||++|+.... ...+.++ +.+.+.. ..+.-... .....|......++++|+.. +..+.++|+
T Consensus 85 ~p~~i~~~~~g~lyv~~~~-~~~v~~iD~~t~~~~~~i~~g~~~----~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIW-DYRIFIINPKTYEITGYIECPDMD----MESGSTEQMVQYGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp SEEEEEEEETTEEEEEEBS-CSEEEEEETTTTEEEEEEECTTCC----TTTCBCCCEEEETTEEEEEECTTCCEEEEEET
T ss_pred CCcEEEEeCCCeEEEEECC-CCeEEEEECCCCeEEEEEEcCCcc----ccCCCcceEEEECCEEEEEcCCCCCEEEEEEC
Confidence 2223444368999998743 2456667 6654322 11110000 00002322233788999985 457899999
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-C
Q 044265 218 ETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-D 296 (517)
Q Consensus 218 ~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~ 296 (517)
++++....++. . ..|. + .++-+ +|++|+..-..... ..|......+.+||+. +.+.... .
T Consensus 160 ~t~~~~~~i~~-g----~~p~-~-i~~~~------dG~l~v~~~~~~~~----~~~~~~~~~v~~id~~--t~~v~~~~~ 220 (328)
T 3dsm_A 160 ETDKVVDELTI-G----IQPT-S-LVMDK------YNKMWTITDGGYEG----SPYGYEAPSLYRIDAE--TFTVEKQFK 220 (328)
T ss_dssp TTTEEEEEEEC-S----SCBC-C-CEECT------TSEEEEEBCCBCTT----CSSCBCCCEEEEEETT--TTEEEEEEE
T ss_pred CCCeEEEEEEc-C----CCcc-c-eEEcC------CCCEEEEECCCccC----CccccCCceEEEEECC--CCeEEEEEe
Confidence 99987755532 1 1221 2 22222 78988876432110 0011123567788865 2333322 3
Q ss_pred CCcceeeeeeEEecCC-cEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCc-cccccceeeecC-CCc
Q 044265 297 MPFGRIMGDMVMLPTG-DVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTI-PRMYHSTANLLP-DGR 373 (517)
Q Consensus 297 m~~~R~~~~~v~lpdG-~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~-~R~yhs~a~ll~-dG~ 373 (517)
++....-...++-+|| ++|+.++ .+.+||+++. +.....-.+. ...-.+ ..+-| +|+
T Consensus 221 ~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~~~~~~~~p~g-i~vdp~~g~ 280 (328)
T 3dsm_A 221 FKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPFLEFRDTKYYG-LTVNPNNGE 280 (328)
T ss_dssp CCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCSBCCCSSCEEE-EEECTTTCC
T ss_pred cCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeeeecCCCCceEE-EEEcCCCCe
Confidence 4332222233444655 5666543 2578999887 5432111111 122233 33466 899
Q ss_pred EEEecCCCccccccCCCCCCceeeEEEeCC
Q 044265 374 VLIAGSNPHYFYKFNAEFPTELRIEAFSPE 403 (517)
Q Consensus 374 V~v~GG~~~~~~~~~~~~~~~~~vE~y~P~ 403 (517)
|||+.... |-...+|.+|+|.
T Consensus 281 lyva~~~~---------y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 281 VYVADAID---------YQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEECTT---------SSSEEEEEEECTT
T ss_pred EEEEcccc---------cccCCEEEEECCC
Confidence 99997321 1113468888876
No 26
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.18 E-value=0.00035 Score=68.34 Aligned_cols=217 Identities=12% Similarity=0.125 Sum_probs=116.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+++....-..+........+.++++++++|+.+ ..+++||.. +.+-.. .+. ....-.+++
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~----~~~~~~----~~~~h~~~v~~~~ 104 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN----TGEKVV----DFEAHPDYIRSIA 104 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT----TCCEEE----EEECCSSCEEEEE
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECC----CCcEEE----EEeCCCCcEEEEE
Confidence 47899998876544333344444456678899999999875 689999987 333221 122 223345667
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEcc-CCcEEEEEC--CceEEEeCCCCeEEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFAN--DKAVMYDYETNKIAR 224 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~Gg--~~~~~ydp~t~~w~~ 224 (517)
..++++.++.|+.+ .++.+| ..+ .+.....+.. +. ..-..+...+ ++++++.|+ ..+.+||..+.+-..
T Consensus 105 ~~~~~~~l~sgs~D-~~v~lWd~~~-~~~~~~~~~~----h~-~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 105 VHPTKPYVLSGSDD-LTVKLWNWEN-NWALEQTFEG----HE-HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp ECSSSSEEEEEETT-SCEEEEEGGG-TTEEEEEECC----CC-SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE
T ss_pred EcCCCCEEEEECCC-CeEEEEECCC-Ccchhhhhcc----cC-CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 77899998888765 467777 332 2221111110 00 0011233445 678888886 468899987643211
Q ss_pred ecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CC--Ccce
Q 044265 225 EYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DM--PFGR 301 (517)
Q Consensus 225 ~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m--~~~R 301 (517)
.+. .+..+.. ......|. .++++++.|+.+. ++..+|+.. . +.. .+ ....
T Consensus 178 ~~~--~~~~~~v---~~~~~~~~----~~~~~l~s~s~D~--------------~i~iWd~~~--~--~~~~~~~~h~~~ 230 (304)
T 2ynn_A 178 TLT--TGQERGV---NYVDYYPL----PDKPYMITASDDL--------------TIKIWDYQT--K--SCVATLEGHMSN 230 (304)
T ss_dssp EEE--CCCTTCE---EEEEECCS----TTCCEEEEEETTS--------------EEEEEETTT--T--EEEEEEECCSSC
T ss_pred eec--cCCcCcE---EEEEEEEc----CCCCEEEEEcCCC--------------eEEEEeCCC--C--ccceeeCCCCCC
Confidence 111 0000100 01111111 1567788887652 122344321 1 111 11 1122
Q ss_pred eeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCC
Q 044265 302 IMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQP 345 (517)
Q Consensus 302 ~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~ 345 (517)
... ....|++++++.|+.+ | ++.+||..+.
T Consensus 231 v~~-~~~~p~~~~l~s~s~D-g------------~i~iWd~~~~ 260 (304)
T 2ynn_A 231 VSF-AVFHPTLPIIISGSED-G------------TLKIWNSSTY 260 (304)
T ss_dssp EEE-EEECSSSSEEEEEETT-S------------CEEEEETTTC
T ss_pred EEE-EEECCCCCEEEEEcCC-C------------eEEEEECCCC
Confidence 222 2456899999998875 3 3689998876
No 27
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.17 E-value=0.00036 Score=71.54 Aligned_cols=138 Identities=12% Similarity=0.139 Sum_probs=85.0
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+++....-..+.......++.++|+++++|+.+ ..+++||.. +.+-.. .+. ....-.+++
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~----~~~~~~----~~~~h~~~V~~v~ 199 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQ----GFECIR----TMHGHDHNVSSVS 199 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETT----SSCEEE----CCCCCSSCEEEEE
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCC----CCceeE----EEcCCCCCEEEEE
Confidence 47899999887654444454444455667899999999875 578899987 333222 222 222344566
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEe
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIARE 225 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~ 225 (517)
..++|+.++.|+.+ .++.+| ..+..... . +... ......+...++|++++.|+ ..+.+||..+.+....
T Consensus 200 ~~p~~~~l~s~s~D-~~i~~wd~~~~~~~~-~-~~~h-----~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~ 271 (410)
T 1vyh_C 200 IMPNGDHIVSASRD-KTIKMWEVQTGYCVK-T-FTGH-----REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271 (410)
T ss_dssp ECSSSSEEEEEETT-SEEEEEETTTCCEEE-E-EECC-----SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EeCCCCEEEEEeCC-CeEEEEECCCCcEEE-E-EeCC-----CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeE
Confidence 77899988888765 467777 44332211 0 1000 01111244457899998887 4688999988766543
Q ss_pred c
Q 044265 226 Y 226 (517)
Q Consensus 226 ~ 226 (517)
+
T Consensus 272 ~ 272 (410)
T 1vyh_C 272 L 272 (410)
T ss_dssp E
T ss_pred e
Confidence 3
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.00099 Score=65.62 Aligned_cols=285 Identities=9% Similarity=0.024 Sum_probs=146.4
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQ 105 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 105 (517)
++.-++|+.++.++.+ | .+.+||..+++....-..+.....+..+.++++.++
T Consensus 38 ~~~s~~~~~l~~~~~d----------g-----------------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 90 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKD----------S-----------------SASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCV 90 (369)
T ss_dssp EEECTTSCEEEEEESS----------S-----------------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEcCCCCEEEEEeCC----------C-----------------EEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEE
Confidence 3455788888877643 2 377899888776554444444444556778999999
Q ss_pred ecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCC----CCceEEe-CCCCC----ce
Q 044265 106 TGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKG----ANTVEYY-PPRNG----AV 176 (517)
Q Consensus 106 ~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~----~~~~E~y-P~~~~----w~ 176 (517)
+|+.+ ..+.+||.. +.+-... +.....-.+++..++|+.+++++.+ ...+.+| ..... +.
T Consensus 91 s~~~d---g~i~iwd~~----~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 159 (369)
T 3zwl_B 91 TGSAD---YSIKLWDVS----NGQCVAT----WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT 159 (369)
T ss_dssp EEETT---TEEEEEETT----TCCEEEE----EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE
T ss_pred EEeCC---CeEEEEECC----CCcEEEE----eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec
Confidence 99874 689999987 4443322 2233445567778899998888765 1345666 22111 11
Q ss_pred ecc--chhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCC-CeEEEecCCCCCCCCCCCCCCceeeeecccCc
Q 044265 177 SFP--FLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYET-NKIAREYPPLDGGPRNYPSAGSSAMLALEGDF 251 (517)
Q Consensus 177 ~~~--~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t-~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~ 251 (517)
... .+..............+...++|+.+++|+. .+.+||..+ .+....+.. . ... -.++.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~-~~~---v~~~~~~----- 227 (369)
T 3zwl_B 160 KVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL---H-EKS---ISDMQFS----- 227 (369)
T ss_dssp EECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC---C-SSC---EEEEEEC-----
T ss_pred ccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec---C-CCc---eeEEEEC-----
Confidence 000 0000000000001223445678988888764 578999988 444433311 0 100 0112221
Q ss_pred cccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeeeEEecCCcEEEEcCccCCCCCcc-cC
Q 044265 252 ATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFE-MA 330 (517)
Q Consensus 252 ~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~-~~ 330 (517)
.+++.+++|+.+. .+..+|+.. .+-.. .+............++++.+++|+.+.+..-+. ..
T Consensus 228 ~~~~~l~~~~~d~--------------~i~v~d~~~--~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 290 (369)
T 3zwl_B 228 PDLTYFITSSRDT--------------NSFLVDVST--LQVLK-KYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSA 290 (369)
T ss_dssp TTSSEEEEEETTS--------------EEEEEETTT--CCEEE-EEECSSCEEEEEECSSSSEEEEEECCC---------
T ss_pred CCCCEEEEecCCc--------------eEEEEECCC--Cceee-eecCCCCceeEEecCCCceEEEeecCCCceEEEEec
Confidence 1677788877552 123444432 11111 111111122335668999999987652211000 00
Q ss_pred CCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 331 SNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 331 ~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
......+.+||..+.. .-..+.. .... -......|||+.+++|+.+.
T Consensus 291 ~~~~~~i~~~d~~~~~--~~~~~~~-~~~~--v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 291 NEGKFEARFYHKIFEE--EIGRVQG-HFGP--LNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp ----CEEEEEETTTCC--EEEEEEC-CSSC--EEEEEECTTSSEEEEEETTS
T ss_pred CCCcceeEEEecCCCc--chhheec-ccCc--EEEEEECCCCCEEEEEcCCC
Confidence 1112257888887661 1111111 1111 11234578999999998653
No 29
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.10 E-value=0.00046 Score=67.13 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=112.6
Q ss_pred eEEEEECCCCCeEEccccCC-CcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTD-TWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.++|++|++..--...+. ..+....+++||++|+.+ .+.+..||+. + ...|.-. . ......+++.
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~-G--~~~W~~~--~--~~~~~~~~~~ 83 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY-----SKGAKMITRD-G--RELWNIA--A--PAGCEMQTAR 83 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC-----BSEEEEECTT-S--CEEEEEE--C--CTTCEEEEEE
T ss_pred EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC-----CCCEEEECCC-C--CEEEEEc--C--CCCccccccE
Confidence 46788988877332111222 245566788999999943 2579999994 2 5678643 2 1112245678
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCC-CceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCC-eEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRN-GAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETN-KIA 223 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~-~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~-~w~ 223 (517)
.++||++++........+-.+ |..+ .|. ...-.... .+......+...++|++++... ..+.+||++.+ .|.
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~-~~~~~~~~--~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNMKGEVLSK-TEFETGIE--RPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNS 160 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECTTSCEEEE-EEECCSCS--SGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEeCCCCEEEE-EeccCCCC--cccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEE
Confidence 899999988865422233334 4322 122 11100000 0011122355678999888764 46889999832 344
Q ss_pred EecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec--CCCcce
Q 044265 224 REYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME--DMPFGR 301 (517)
Q Consensus 224 ~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~--~m~~~R 301 (517)
... + ..+. ++..++ ++.+++++.... .+..+|+....-.|+.. ..+..|
T Consensus 161 ~~~---~----~~~~--~~~~~~------~g~~~v~~~~~~--------------~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 161 VKL---S----GTPF--SSAFLD------NGDCLVACGDAH--------------CFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp EEC---S----SCCC--EEEECT------TSCEEEECBTTS--------------EEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred EEC---C----CCcc--ceeEcC------CCCEEEEeCCCC--------------eEEEEeCcCCcEEEEecCCCCCCcc
Confidence 322 1 1121 233343 788888776431 23445554334567753 233222
Q ss_pred e--eeeeEEecCCcEEEEc
Q 044265 302 I--MGDMVMLPTGDVLIIN 318 (517)
Q Consensus 302 ~--~~~~v~lpdG~v~v~G 318 (517)
. ..++.+++||.|||..
T Consensus 212 l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CSEEEEEEECTTSCEEEEE
T ss_pred ccccccceEcCCCCEEEEe
Confidence 1 2344677899999987
No 30
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.05 E-value=0.0014 Score=66.75 Aligned_cols=135 Identities=11% Similarity=0.102 Sum_probs=77.6
Q ss_pred eEEEEECCCCCeEEccc-----cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCc
Q 044265 70 HSAILDLQTNQIRPLMI-----LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRW 143 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~-----~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~ 143 (517)
.+.+||+.+++...... .+.......++.++|+++++++.+ ..+++||.. +.+.... +. ....
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~----~~~~~~~----~~~~~~~ 213 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK----TLAYKAT----VDLTGKW 213 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT----TCCEEEE----EECSSSS
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC----CceEEEE----EcCCCCC
Confidence 37899999988765322 222233334556789999998753 689999987 4333221 21 1223
Q ss_pred cceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCcEEEEEC----------Cc
Q 044265 144 YGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN----------DK 211 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg----------~~ 211 (517)
-.+.+.-++|+.+++.+.....+.+| +.+.+.... +.. ...+ .+...++|+.+++++ ..
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~--~~~-------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~ 284 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK--TDK-------IGLPRGLLLSKDGKELYIAQFSASNQESGGGR 284 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE--CCC-------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEE
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE--ecC-------CCCceEEEEcCCCCEEEEEECCCCccccCCCe
Confidence 34556667887665555444567777 554332211 100 0011 244557887665554 25
Q ss_pred eEEEeCCCCeEEE
Q 044265 212 AVMYDYETNKIAR 224 (517)
Q Consensus 212 ~~~ydp~t~~w~~ 224 (517)
+.+||+.+++...
T Consensus 285 i~~~d~~~~~~~~ 297 (433)
T 3bws_A 285 LGIYSMDKEKLID 297 (433)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCcEEe
Confidence 7799999887654
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.02 E-value=0.00065 Score=66.15 Aligned_cols=230 Identities=13% Similarity=0.159 Sum_probs=121.8
Q ss_pred ccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-C
Q 044265 92 CSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-P 170 (517)
Q Consensus 92 c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P 170 (517)
.....+.++|+++++|+ + ..+++||............. ........-.+++..++|+.+++|+.+ ..+.+| .
T Consensus 54 v~~~~~~~~~~~l~~~~-d---g~i~iw~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~ 126 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG-K---GCVKVWDISHPGNKSPVSQL--DCLNRDNYIRSCKLLPDGCTLIVGGEA-STLSIWDL 126 (337)
T ss_dssp CCEEEECSSSSEEEEEC-B---SEEEEEETTSTTCCSCSEEE--ECSCTTSBEEEEEECTTSSEEEEEESS-SEEEEEEC
T ss_pred eEEEEEecCCcEEEEcC-C---CeEEEEECCCCCceeeeecc--cccCCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEEC
Confidence 34455678999999998 3 68999998732101112111 111233344566778899998888765 457777 5
Q ss_pred CCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecc
Q 044265 171 PRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALE 248 (517)
Q Consensus 171 ~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~ 248 (517)
...+......+... ...-..+...++|+.+++|+ ..+.+||..+++....+.. . .... ......|
T Consensus 127 ~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~---~-~~~i--~~~~~~~-- 193 (337)
T 1gxr_A 127 AAPTPRIKAELTSS-----APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---H-TDGA--SCIDISN-- 193 (337)
T ss_dssp CCC--EEEEEEECS-----SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---C-SSCE--EEEEECT--
T ss_pred CCCCcceeeecccC-----CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec---c-cCce--EEEEECC--
Confidence 54442211111100 00111345567898888886 4688999998876654421 1 1100 1112222
Q ss_pred cCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeeeEEecCCcEEEEcCccCCCCCcc
Q 044265 249 GDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFE 328 (517)
Q Consensus 249 ~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~ 328 (517)
+++.+++|+.+ + .+..+|+........ ..... .. ......++|+.+++|+.+ +
T Consensus 194 ----~~~~l~~~~~d-g-------------~i~~~d~~~~~~~~~-~~~~~-~v-~~~~~s~~~~~l~~~~~~-~----- 246 (337)
T 1gxr_A 194 ----DGTKLWTGGLD-N-------------TVRSWDLREGRQLQQ-HDFTS-QI-FSLGYCPTGEWLAVGMES-S----- 246 (337)
T ss_dssp ----TSSEEEEEETT-S-------------EEEEEETTTTEEEEE-EECSS-CE-EEEEECTTSSEEEEEETT-S-----
T ss_pred ----CCCEEEEEecC-C-------------cEEEEECCCCceEee-ecCCC-ce-EEEEECCCCCEEEEEcCC-C-----
Confidence 67777777765 2 123344431100001 01111 12 222445899999998754 2
Q ss_pred cCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 329 MASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 329 ~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
.+.+||..+. +-..+.... ..-......+||+.+++|+.+
T Consensus 247 -------~i~~~~~~~~---~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 247 -------NVEVLHVNKP---DKYQLHLHE---SCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp -------CEEEEETTSS---CEEEECCCS---SCEEEEEECTTSSEEEEEETT
T ss_pred -------cEEEEECCCC---CeEEEcCCc---cceeEEEECCCCCEEEEecCC
Confidence 3688998876 322221111 111224457899999999864
No 32
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.01 E-value=0.0032 Score=61.85 Aligned_cols=248 Identities=11% Similarity=-0.003 Sum_probs=122.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCc-EEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-------
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGT-VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG------- 141 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~------- 141 (517)
.+.+||+.+++....-... ....+.++.+||+ +|+.+... ..+.+||+. +.+-... -++...
T Consensus 70 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~----~~~~~~~--~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVN---SAVTAIDAK----TGEVKGR--LVLDDRKRTEEVR 139 (353)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTT---TEEEEEETT----TCCEEEE--EESCCCCCCSSCC
T ss_pred cEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCC---CEEEEEeCC----CCeeEEE--EecCCCccccccC
Confidence 5889999988765433221 1233456678887 66665532 589999998 3332211 112111
Q ss_pred -CccceeEEcCCCc-EEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEE
Q 044265 142 -RWYGTDQILPDGS-VIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMY 215 (517)
Q Consensus 142 -R~~~s~~~L~dG~-v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~y 215 (517)
..-...+.-+||+ +|+.+......+.+| +.+.+-. ..+... .. -....+.+||+.++++. ..+.+|
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~-~~~~~~s~dg~~l~~~~~~~~i~~~ 211 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG-------KM-STGLALDSEGKRLYTTNADGELITI 211 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC-------TT-CCCCEEETTTTEEEEECTTSEEEEE
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC-------Cc-cceEEECCCCCEEEEEcCCCeEEEE
Confidence 1123456667877 454442333456667 5443222 111000 00 11245567887554443 467889
Q ss_pred eCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec
Q 044265 216 DYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME 295 (517)
Q Consensus 216 dp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~ 295 (517)
|..+++-...++.-......++ ...++-| .+..+|+..... ..+..+|+.. .+....
T Consensus 212 d~~~~~~~~~~~~~~~~~~~~~--~~~~~s~-----dg~~l~~~~~~~--------------~~v~~~d~~~--~~~~~~ 268 (353)
T 3vgz_A 212 DTADNKILSRKKLLDDGKEHFF--INISLDT-----ARQRAFITDSKA--------------AEVLVVDTRN--GNILAK 268 (353)
T ss_dssp ETTTTEEEEEEECCCSSSCCCE--EEEEEET-----TTTEEEEEESSS--------------SEEEEEETTT--CCEEEE
T ss_pred ECCCCeEEEEEEcCCCCCCccc--ceEEECC-----CCCEEEEEeCCC--------------CEEEEEECCC--CcEEEE
Confidence 9998876543322110011111 1122222 133466654321 2345566542 222221
Q ss_pred -CCCcceeeeeeEEecCCc-EEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCc
Q 044265 296 -DMPFGRIMGDMVMLPTGD-VLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGR 373 (517)
Q Consensus 296 -~m~~~R~~~~~v~lpdG~-v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~ 373 (517)
+...++ ....-+||+ +|+.+..+ + .+.+||.++. +.... .+....-++ ..+.+||+
T Consensus 269 ~~~~~~~---~~~~s~dg~~l~v~~~~~-~------------~v~~~d~~~~---~~~~~--~~~~~~~~~-~~~s~dg~ 326 (353)
T 3vgz_A 269 VAAPESL---AVLFNPARNEAYVTHRQA-G------------KVSVIDAKSY---KVVKT--FDTPTHPNS-LALSADGK 326 (353)
T ss_dssp EECSSCC---CEEEETTTTEEEEEETTT-T------------EEEEEETTTT---EEEEE--EECCSEEEE-EEECTTSC
T ss_pred EEcCCCc---eEEECCCCCEEEEEECCC-C------------eEEEEECCCC---eEEEE--EecCCCCCe-EEEcCCCC
Confidence 333332 234558998 67765432 1 4688999877 54322 111222233 44579998
Q ss_pred -EEEecCC
Q 044265 374 -VLIAGSN 380 (517)
Q Consensus 374 -V~v~GG~ 380 (517)
+||+...
T Consensus 327 ~l~v~~~~ 334 (353)
T 3vgz_A 327 TLYVSVKQ 334 (353)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcc
Confidence 6776654
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.00 E-value=0.0025 Score=63.91 Aligned_cols=137 Identities=13% Similarity=0.193 Sum_probs=80.8
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcE-EEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTV-LQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l-~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.+||..+++.......+.. ..+.++.+||+. ++.++.+ ..+++||.. +.+.... +.....-.+++
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~----~~~~~~~----~~~~~~v~~~~ 80 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHS---NDVSIIDTA----TNNVIAT----VPAGSSPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGG---TEEEEEETT----TTEEEEE----EECSSSEEEEE
T ss_pred EEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCC---CeEEEEECC----CCeEEEE----EECCCCccceE
Confidence 477889888776543332222 334566788875 4666443 689999987 4444322 33333445667
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEEC--CceEEEeCCCCeEEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DKAVMYDYETNKIAR 224 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~~~~ydp~t~~w~~ 224 (517)
..+||+.+++++.....+.+| ..+.+.... +... . .-..+...++|+ ||+.+. ..+.+||..+++...
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~--~~~~-----~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGT--VKTG-----K-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEE--EECS-----S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEE--EeCC-----C-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 778898666666555678888 554433211 1100 0 011345567887 556665 468899999988765
Q ss_pred ec
Q 044265 225 EY 226 (517)
Q Consensus 225 ~~ 226 (517)
.+
T Consensus 153 ~~ 154 (391)
T 1l0q_A 153 TV 154 (391)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.99 E-value=0.0027 Score=64.18 Aligned_cols=225 Identities=12% Similarity=0.071 Sum_probs=118.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+++-......+........+.++|+++++|+.+ ..+++||... .+-. ..+. ....-.+++
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~~----~~~~----~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVKD----GSNP----RTLIGHRATVTDIA 188 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTT----CCCC----EEEECCSSCEEEEE
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCCC----CcCc----eEEcCCCCcEEEEE
Confidence 57899998877665544555555566778899999999874 6899999873 2211 1122 222344566
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhcccc----------------ccCCCCceEEEccCCcEEEEECC
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDK----------------QMDNLYPYVHLLPNGHLFIFAND 210 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~----------------~~~~~yp~~~~~~~G~iyv~Gg~ 210 (517)
..++|+.++.|+.+. ++.+| ..+.+-. ........... .....-..+...++|++++.|+.
T Consensus 189 ~~~~~~~l~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 189 IIDRGRNVLSASLDG-TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp EETTTTEEEEEETTS-CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred EcCCCCEEEEEcCCC-cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence 778999988888653 56666 4332211 11000000000 00000001122468888888864
Q ss_pred --ceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccE-EEEEcCCcCCcccccCCCCCCCCceeEEEecC
Q 044265 211 --KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAV-IVVCGGAQFGAFIQRSTDTPAHGSCGRIIATS 287 (517)
Q Consensus 211 --~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gk-I~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~ 287 (517)
.+.+||..+.+-...+.. . ...+ -.++.+. .+++ ++++|+.+ + .+..+|+..
T Consensus 268 dg~i~i~d~~~~~~~~~~~~-~---~~~~--v~~~~~~-----~~~~~~l~~g~~d-g-------------~i~vwd~~~ 322 (420)
T 3vl1_A 268 SGVITVHNVFSKEQTIQLPS-K---FTCS--CNSLTVD-----GNNANYIYAGYEN-G-------------MLAQWDLRS 322 (420)
T ss_dssp TSCEEEEETTTCCEEEEECC-T---TSSC--EEEEEEC-----SSCTTEEEEEETT-S-------------EEEEEETTC
T ss_pred CCeEEEEECCCCceeEEccc-c---cCCC--ceeEEEe-----CCCCCEEEEEeCC-C-------------eEEEEEcCC
Confidence 588999988765543321 0 0100 1122221 1455 78888765 2 133455432
Q ss_pred CCCCceecCCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCC
Q 044265 288 ADPTWEMEDMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQP 345 (517)
Q Consensus 288 ~~~~W~~~~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~ 345 (517)
....-......... ...++..++|+++++|+.+ + .+.+||....
T Consensus 323 ~~~~~~~~~~~~~~-~v~~~~~~~~~~l~s~~~d-~------------~v~iw~~~~~ 366 (420)
T 3vl1_A 323 PECPVGEFLINEGT-PINNVYFAAGALFVSSGFD-T------------SIKLDIISDP 366 (420)
T ss_dssp TTSCSEEEEESTTS-CEEEEEEETTEEEEEETTT-E------------EEEEEEECCT
T ss_pred CcCchhhhhccCCC-CceEEEeCCCCEEEEecCC-c------------cEEEEeccCC
Confidence 11101111111111 1223566799999998865 2 3678886653
No 35
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.96 E-value=0.0013 Score=65.52 Aligned_cols=186 Identities=11% Similarity=0.006 Sum_probs=109.4
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEcc---ccCCCcccceeecCCCc
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLM---ILTDTWCSSGQILADGT 102 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~---~~~~~~c~~~~~l~dG~ 102 (517)
.+.-++|++++.++.+ | .+.+||..+++|.... ..+.......++.+||+
T Consensus 22 l~~sp~g~~las~~~D----------~-----------------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~ 74 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGD----------R-----------------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN 74 (345)
T ss_dssp EEECTTSSCEEEEETT----------S-----------------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS
T ss_pred EEECCCCCEEEEEcCC----------C-----------------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC
Confidence 3455788888877643 2 4778998888775322 23444455566778999
Q ss_pred EEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCccceeEEcCCCcEEEEcCCCCCceEEe-CCCC-Cceecc
Q 044265 103 VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWYGTDQILPDGSVIILGGKGANTVEYY-PPRN-GAVSFP 179 (517)
Q Consensus 103 l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~-~w~~~~ 179 (517)
.+++|+.+ ..+++||.. +..+... ..+.. ...-.+++..++|+.++.|+.+ .++.+| .... ......
T Consensus 75 ~l~s~s~D---~~v~iw~~~----~~~~~~~--~~~~~h~~~v~~v~~sp~~~~l~s~s~D-~~v~iwd~~~~~~~~~~~ 144 (345)
T 3fm0_A 75 YLASASFD---ATTCIWKKN----QDDFECV--TTLEGHENEVKSVAWAPSGNLLATCSRD-KSVWVWEVDEEDEYECVS 144 (345)
T ss_dssp EEEEEETT---SCEEEEEEC----CC-EEEE--EEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEEECTTSCEEEEE
T ss_pred EEEEEECC---CcEEEEEcc----CCCeEEE--EEccCCCCCceEEEEeCCCCEEEEEECC-CeEEEEECCCCCCeEEEE
Confidence 99999875 578899876 4555433 23332 2234556777899999988876 457777 3332 222111
Q ss_pred chhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEE
Q 044265 180 FLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIV 257 (517)
Q Consensus 180 ~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~ 257 (517)
.+... . ..-..+...++|++++.|+ ..+.+||..+++|.. ...+.+. ... -.++.+. .+++.+
T Consensus 145 ~~~~h----~-~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~-~~~~~~h-~~~---v~~l~~s-----p~g~~l 209 (345)
T 3fm0_A 145 VLNSH----T-QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC-CATLEGH-EST---VWSLAFD-----PSGQRL 209 (345)
T ss_dssp EECCC----C-SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE-EEEECCC-SSC---EEEEEEC-----TTSSEE
T ss_pred EecCc----C-CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE-EEEecCC-CCc---eEEEEEC-----CCCCEE
Confidence 11110 0 0111244567999888886 468899998888752 2222221 110 0122221 168888
Q ss_pred EEcCCc
Q 044265 258 VCGGAQ 263 (517)
Q Consensus 258 v~GG~~ 263 (517)
+.|+.+
T Consensus 210 ~s~s~D 215 (345)
T 3fm0_A 210 ASCSDD 215 (345)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 888876
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.96 E-value=0.0017 Score=65.97 Aligned_cols=250 Identities=10% Similarity=0.045 Sum_probs=132.9
Q ss_pred eEEEEECCCCCeEEcccc-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.+||..+++....... +.......+..++|+++++|+.+ ..+.+||.. +.+... .+..........
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~----~~~~~~----~~~~~~~~v~~~ 182 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE----SQTKLR----TMAGHQARVGCL 182 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT----TCCEEE----EECCCSSCEEEE
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc----CCeEEE----EecCCCCceEEE
Confidence 588999999887765543 34444455677899999999864 579999987 444322 232222222333
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEe
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIARE 225 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~ 225 (517)
.. ++++++.|+.+ ..+.+| ........... ... ...-..+...++|++++.|+ ..+.+||..+.+-...
T Consensus 183 ~~-~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 183 SW-NRHVLSSGSRS-GAIHHHDVRIANHQIGTL-QGH-----SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp EE-ETTEEEEEETT-SEEEEEETTSSSCEEEEE-ECC-----SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred EE-CCCEEEEEcCC-CCEEEEecccCcceeeEE-cCC-----CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 34 78888888765 456677 43222111111 000 00111244567999998887 4688999998765543
Q ss_pred cCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeee
Q 044265 226 YPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGD 305 (517)
Q Consensus 226 ~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~ 305 (517)
+..- .... -+....| .+..++++||.... ..+..+|+.. .+-.. .+.....-.+
T Consensus 255 ~~~~----~~~v--~~~~~~p-----~~~~ll~~~~gs~d------------~~i~i~d~~~--~~~~~-~~~~~~~v~~ 308 (401)
T 4aez_A 255 KTNH----NAAV--KAVAWCP-----WQSNLLATGGGTMD------------KQIHFWNAAT--GARVN-TVDAGSQVTS 308 (401)
T ss_dssp ECCC----SSCC--CEEEECT-----TSTTEEEEECCTTT------------CEEEEEETTT--CCEEE-EEECSSCEEE
T ss_pred ecCC----cceE--EEEEECC-----CCCCEEEEecCCCC------------CEEEEEECCC--CCEEE-EEeCCCcEEE
Confidence 3211 1110 1122222 14567777752111 1233455432 11111 1111111122
Q ss_pred eEEecCCcEEEE--cCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCC--CccccccceeeecCCCcEEEecCCC
Q 044265 306 MVMLPTGDVLII--NGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPG--TIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 306 ~v~lpdG~v~v~--GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~--~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
....++|+.+++ |..+ | .+.+||..+. +......+ ...+.. ...+.+||+.+++|+.+
T Consensus 309 ~~~s~~~~~l~~~~g~~d-g------------~i~v~~~~~~---~~~~~~~~~~h~~~v~--~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 309 LIWSPHSKEIMSTHGFPD-N------------NLSIWSYSSS---GLTKQVDIPAHDTRVL--YSALSPDGRILSTAASD 370 (401)
T ss_dssp EEECSSSSEEEEEECTTT-C------------EEEEEEEETT---EEEEEEEEECCSSCCC--EEEECTTSSEEEEECTT
T ss_pred EEECCCCCeEEEEeecCC-C------------cEEEEecCCc---cceeEEEecCCCCCEE--EEEECCCCCEEEEEeCC
Confidence 245578988877 3333 2 3688888776 55433221 112222 23457999999999865
Q ss_pred c
Q 044265 382 H 382 (517)
Q Consensus 382 ~ 382 (517)
.
T Consensus 371 g 371 (401)
T 4aez_A 371 E 371 (401)
T ss_dssp S
T ss_pred C
Confidence 3
No 37
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.95 E-value=0.0055 Score=59.78 Aligned_cols=131 Identities=15% Similarity=0.158 Sum_probs=73.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCc-EEEecCCCCCCCeEEEecCCCCCCCCce-EeccCccccCcCc-cce
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGT-VLQTGGDLDGYKKIRKFSPCEANGLCDW-VELDDVELVNGRW-YGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~t~~W-~~~~~~~m~~~R~-~~s 146 (517)
.+.+||+.+++............ ..++.+||+ +|+.+.. ...+.+||+. +.+. ... +..... ..+
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~----~~~~~~~~----~~~~~~~~~~ 88 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ----LEPPKVVA----IQEGQSSMAD 88 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS----SSSCEEEE----EEECSSCCCC
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC----CCceeEEe----cccCCCCccc
Confidence 57899999998865543333222 556678998 5555542 2589999998 4443 211 121111 222
Q ss_pred eEEcCCCcEEEEcCCCCC--ceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEEC--Cc-eEEEeCCC
Q 044265 147 DQILPDGSVIILGGKGAN--TVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DK-AVMYDYET 219 (517)
Q Consensus 147 ~~~L~dG~v~vvGG~~~~--~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~-~~~ydp~t 219 (517)
++.-+||+.++++..... .+.+| ..+.+.... +... ..-..+.+.+||+ +|+... .. +.+||...
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~--~~~~------~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST--IPIP------YDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE--EECC------TTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE--EECC------CCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 567789986665544333 67788 544333211 1100 0012356678996 777653 45 78888764
Q ss_pred C
Q 044265 220 N 220 (517)
Q Consensus 220 ~ 220 (517)
+
T Consensus 161 ~ 161 (331)
T 3u4y_A 161 D 161 (331)
T ss_dssp T
T ss_pred C
Confidence 3
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.95 E-value=0.00095 Score=67.64 Aligned_cols=137 Identities=8% Similarity=0.088 Sum_probs=79.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~~ 148 (517)
.+.+||..+.+.......+ .........++|+++++|+.+ ..+++||.. +.+-... + .....-.+++
T Consensus 79 ~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~----~~~~~~~----~~~h~~~v~~~~ 146 (420)
T 3vl1_A 79 HDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE---GDIKVLDSN----FNLQREI----DQAHVSEITKLK 146 (420)
T ss_dssp EEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT---SCEEEECTT----SCEEEEE----TTSSSSCEEEEE
T ss_pred cEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC---CCEEEEeCC----Ccceeee----cccccCccEEEE
Confidence 4778887654432221122 222223456799999999864 579999987 3332221 2 2233345667
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEe
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIARE 225 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~ 225 (517)
..++|+.++.|+.+ .++.+| ..+.+-.. .+... . ..-..+...++|+.++.|+ ..+.+||..+++-...
T Consensus 147 ~~~~~~~l~s~s~d-~~i~iwd~~~~~~~~--~~~~h----~-~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 147 FFPSGEALISSSQD-MQLKIWSVKDGSNPR--TLIGH----R-ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp ECTTSSEEEEEETT-SEEEEEETTTCCCCE--EEECC----S-SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCC-CeEEEEeCCCCcCce--EEcCC----C-CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE
Confidence 77899988888765 467777 44322110 01100 0 0111345567999888876 4588999998876544
Q ss_pred c
Q 044265 226 Y 226 (517)
Q Consensus 226 ~ 226 (517)
+
T Consensus 219 ~ 219 (420)
T 3vl1_A 219 F 219 (420)
T ss_dssp E
T ss_pred e
Confidence 4
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.93 E-value=0.0028 Score=64.31 Aligned_cols=114 Identities=20% Similarity=0.198 Sum_probs=70.0
Q ss_pred cceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCCCceEEe-C
Q 044265 93 SSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGANTVEYY-P 170 (517)
Q Consensus 93 ~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P 170 (517)
...++.+||+.+++|+.+ ..+++||.. +.+-.. .+. ....-.+++..++|+.++.|+.+ .++.+| .
T Consensus 127 ~~v~~s~dg~~l~s~~~d---~~i~iwd~~----~~~~~~----~~~~h~~~v~~~~~~p~~~~l~s~s~d-~~v~iwd~ 194 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAED---RLIRIWDIE----NRKIVM----ILQGHEQDIYSLDYFPSGDKLVSGSGD-RTVRIWDL 194 (393)
T ss_dssp EEEEECTTSSEEEEEETT---SCEEEEETT----TTEEEE----EECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEET
T ss_pred EEEEECCCCCEEEEEcCC---CeEEEEECC----CCcEEE----EEccCCCCEEEEEEcCCCCEEEEecCC-CcEEEEEC
Confidence 345567899999999874 689999987 443322 122 22334456677899988888765 467777 4
Q ss_pred CCCCceeccchhhccccccCCCCceEEEcc-CCcEEEEEC--CceEEEeCCCCeEEEec
Q 044265 171 PRNGAVSFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFAN--DKAVMYDYETNKIAREY 226 (517)
Q Consensus 171 ~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~Gg--~~~~~ydp~t~~w~~~~ 226 (517)
.+.+.... +.. . .....+...+ +|++++.|+ ..+.+||..+++....+
T Consensus 195 ~~~~~~~~--~~~-~-----~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 195 RTGQCSLT--LSI-E-----DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 245 (393)
T ss_dssp TTTEEEEE--EEC-S-----SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCeeEEE--EEc-C-----CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee
Confidence 43322110 000 0 0011234455 889998886 46889999988755433
No 40
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.91 E-value=0.00094 Score=66.11 Aligned_cols=146 Identities=13% Similarity=0.069 Sum_probs=79.9
Q ss_pred eEEEEECCCCCeEEcccc-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCcccee
Q 044265 70 HSAILDLQTNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~ 147 (517)
.+..+|+++++++.+... ....-...++.+||+||+++.. .....+.+||.. +.++..+ ..+. ....-..+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~----~g~~~~~--~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID----GQTAHKL--NTVVAPGTPPAYV 91 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE----TTEEEEE--EEEEEESCCCSEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec----CCcEEEe--eeeecCCCCCEEE
Confidence 567788999988775432 1222233556789997776532 123678999986 5555554 2222 12223345
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCC-CCceeccchhhcccccc----CCCCc-eEEEccCCcEEEEEC--CceEEEeCC
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPR-NGAVSFPFLADVEDKQM----DNLYP-YVHLLPNGHLFIFAN--DKAVMYDYE 218 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~-~~w~~~~~l~~t~~~~~----~~~yp-~~~~~~~G~iyv~Gg--~~~~~ydp~ 218 (517)
+.-+||+.+++.+....++.+| ... ........+... ...+ ....+ .+.+.+||++|+... ..+.+||..
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHS-GHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECC-CCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecC-CCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 6778998666665445567777 432 222211111000 0000 00122 256678999887753 468899988
Q ss_pred -CCeEE
Q 044265 219 -TNKIA 223 (517)
Q Consensus 219 -t~~w~ 223 (517)
+++..
T Consensus 171 ~~g~~~ 176 (347)
T 3hfq_A 171 DAGQLS 176 (347)
T ss_dssp TTSCEE
T ss_pred CCCcEE
Confidence 45443
No 41
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.89 E-value=0.0063 Score=59.97 Aligned_cols=163 Identities=15% Similarity=0.185 Sum_probs=96.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+++-...-..+.......++.+||+.+++|+.+ ..+++||.. +.+-.. .+. ......+++
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~----~~~~~~----~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE----SGKKEY----SLDTRGKFILSIA 171 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT----TCSEEE----EEECSSSCEEEEE
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC----CCceeE----EecCCCceEEEEE
Confidence 57899998876543322233333345678899999999864 679999987 332211 121 223345667
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCeEEEe
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNKIARE 225 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~w~~~ 225 (517)
..+||+.++.|+.+ ..+.+| ..+.+... .+.. .... -..+...++|++++.|+. .+.+||..+.+....
T Consensus 172 ~spdg~~lasg~~d-g~i~iwd~~~~~~~~--~~~~----h~~~-v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 172 YSPDGKYLASGAID-GIINIFDIATGKLLH--TLEG----HAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp ECTTSSEEEEEETT-SCEEEEETTTTEEEE--EECC----CSSC-CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE
T ss_pred ECCCCCEEEEEcCC-CeEEEEECCCCcEEE--EEcc----cCCc-eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE
Confidence 77899999988866 457777 44332211 0110 0001 113556789999999874 588999988776543
Q ss_pred cCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 226 YPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 226 ~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
+ .+. ... -.++.+. .+++.++.|+.+
T Consensus 244 ~---~~h-~~~---v~~~~~s-----p~~~~l~s~s~D 269 (321)
T 3ow8_A 244 L---SGH-ASW---VLNVAFC-----PDDTHFVSSSSD 269 (321)
T ss_dssp E---CCC-SSC---EEEEEEC-----TTSSEEEEEETT
T ss_pred E---cCC-CCc---eEEEEEC-----CCCCEEEEEeCC
Confidence 3 211 111 0122221 167888888876
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.89 E-value=0.0019 Score=66.53 Aligned_cols=135 Identities=7% Similarity=0.009 Sum_probs=76.4
Q ss_pred eEEEEECCCCCeEEccc--cCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 70 HSAILDLQTNQIRPLMI--LTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
.+.+||..+++...+.. .|.....+..+.+ |+.++++|+.+ ..+++||.. +...... ...-....+..+
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v~iwd~~----~~~~~~~-~~~~~~~~~~~~ 214 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTTRLQDFK----GNILRVF-ASSDTINIWFCS 214 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCEEEEETT----SCEEEEE-ECCSSCSCCCCC
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEEEEeecc----CCceeEE-eccCCCCccEEE
Confidence 47899988776543322 3443344445554 78999999875 579999987 4443332 011122234456
Q ss_pred eEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEEC--CceEEEeCCCCe
Q 044265 147 DQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DKAVMYDYETNK 221 (517)
Q Consensus 147 ~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~~~~ydp~t~~ 221 (517)
++..++|++++.|+.+ ..+.+| .....-.. +.. +... --.+...+++. +++.|+ ..+.+||..+.+
T Consensus 215 ~~~~~~~~~l~~g~~d-g~i~~wd~~~~~~~~---~~~----h~~~-v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 215 LDVSASSRMVVTGDNV-GNVILLNMDGKELWN---LRM----HKKK-VTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp EEEETTTTEEEEECSS-SBEEEEESSSCBCCC---SBC----CSSC-EEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred EEECCCCCEEEEEeCC-CcEeeeccCcceeEE---Eec----ccce-EEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 6677899999998865 356666 32211111 100 0000 01233446664 777775 457889987754
No 43
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.88 E-value=0.0039 Score=62.33 Aligned_cols=233 Identities=14% Similarity=0.130 Sum_probs=122.3
Q ss_pred cceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CC
Q 044265 93 SSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PP 171 (517)
Q Consensus 93 ~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~ 171 (517)
.+..+.+||+.+++||.+ ..+++||.. +...... ..+ ...+-.+++..++|+.++.||.+. .+.+| ..
T Consensus 68 ~~~~~s~d~~~l~s~s~D---g~v~vWd~~----~~~~~~~--~~~-~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~ 136 (354)
T 2pbi_B 68 LCMDWCKDKRRIVSSSQD---GKVIVWDSF----TTNKEHA--VTM-PCTWVMACAYAPSGCAIACGGLDN-KCSVYPLT 136 (354)
T ss_dssp EEEEECTTSSEEEEEETT---SEEEEEETT----TCCEEEE--EEC-SSSCCCEEEECTTSSEEEEESTTS-EEEEEECC
T ss_pred EEEEECCCCCEEEEEeCC---CeEEEEECC----CCCcceE--Eec-CCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEe
Confidence 345567899999999975 689999987 3333222 111 234556778889999999999764 56666 22
Q ss_pred CCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeeccc
Q 044265 172 RNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEG 249 (517)
Q Consensus 172 ~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~ 249 (517)
...-............+ ...-..+...++++.++.|+ ..+.+||..+++....+ .+. ...- -+..+.|.
T Consensus 137 ~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~h--~~~v-~~~~~~~~-- 207 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMH-TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF---HGH--GADV-LCLDLAPS-- 207 (354)
T ss_dssp CCTTCCSGGGCEEEEEC-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE---ECC--SSCE-EEEEECCC--
T ss_pred ccccccccccceeeecc-CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE---cCC--CCCe-EEEEEEeC--
Confidence 11100000000000000 01111244456787666665 46889999988765433 111 0000 01111111
Q ss_pred CccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcc
Q 044265 250 DFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFE 328 (517)
Q Consensus 250 ~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~ 328 (517)
.+++.+++|+.+. . +..+|+.. .+.... .........- ...|+|+.+++|+.+ +
T Consensus 208 --~~g~~l~sgs~Dg-~-------------v~~wd~~~--~~~~~~~~~h~~~v~~v-~~~p~~~~l~s~s~D-~----- 262 (354)
T 2pbi_B 208 --ETGNTFVSGGCDK-K-------------AMVWDMRS--GQCVQAFETHESDVNSV-RYYPSGDAFASGSDD-A----- 262 (354)
T ss_dssp --SSCCEEEEEETTS-C-------------EEEEETTT--CCEEEEECCCSSCEEEE-EECTTSSEEEEEETT-S-----
T ss_pred --CCCCEEEEEeCCC-e-------------EEEEECCC--CcEEEEecCCCCCeEEE-EEeCCCCEEEEEeCC-C-----
Confidence 1467888888762 1 23344331 111111 1122223222 445899999998865 2
Q ss_pred cCCCCccccEEEeCCCCCCceec-cCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 329 MASNPCLFPVLYRPTQPAGLRFM-TLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 329 ~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
++.+||..++ +-. ..... ............+||+++++|+.+
T Consensus 263 -------~v~lwd~~~~---~~~~~~~~~-~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 263 -------TCRLYDLRAD---REVAIYSKE-SIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp -------CEEEEETTTT---EEEEEECCT-TCCSCEEEEEECTTSSEEEEEETT
T ss_pred -------eEEEEECCCC---cEEEEEcCC-CcccceeEEEEeCCCCEEEEEECC
Confidence 3688998776 321 11111 111112234557899999999865
No 44
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.88 E-value=0.0029 Score=63.92 Aligned_cols=258 Identities=11% Similarity=0.107 Sum_probs=127.4
Q ss_pred EEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcC
Q 044265 73 ILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILP 151 (517)
Q Consensus 73 ~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~ 151 (517)
.|+|.+..-...-..|.....+..+.++|+++++|+.+ ..+++||.. +.+-... +. ...+-.+++..+
T Consensus 50 ~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D---~~v~iWd~~----~~~~~~~----~~~h~~~v~~~~~s~ 118 (380)
T 3iz6_a 50 SFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQD---GRLIVWNAL----TSQKTHA----IKLHCPWVMECAFAP 118 (380)
T ss_dssp CCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETT---SEEEEEETT----TTEEEEE----EECCCTTCCCCEECT
T ss_pred ccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCC---CeEEEEECC----CCccceE----EecCCCCEEEEEECC
Confidence 35554333222223344444455667899999999875 689999987 3332221 21 233455667888
Q ss_pred CCcEEEEcCCCCCceEEe-CCCCCce--eccchhhccccccCCCCceEEEccC-CcEEEEEC--CceEEEeCCCCeEEEe
Q 044265 152 DGSVIILGGKGANTVEYY-PPRNGAV--SFPFLADVEDKQMDNLYPYVHLLPN-GHLFIFAN--DKAVMYDYETNKIARE 225 (517)
Q Consensus 152 dG~v~vvGG~~~~~~E~y-P~~~~w~--~~~~l~~t~~~~~~~~yp~~~~~~~-G~iyv~Gg--~~~~~ydp~t~~w~~~ 225 (517)
||+.++.||.+. .+.+| ....... ..+.. .....+..... .+...++ +..++.|+ ..+.+||..+++-...
T Consensus 119 ~g~~las~~~d~-~v~iw~~~~~~~~~~~~~~~-~~~~gh~~~v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~ 195 (380)
T 3iz6_a 119 NGQSVACGGLDS-ACSIFNLSSQADRDGNMPVS-RVLTGHKGYAS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISI 195 (380)
T ss_dssp TSSEEEECCSSS-CCEEEECCCCSSCCCSSTTC-CBCCCCSSCCC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEE
T ss_pred CCCEEEEeeCCC-cEEEEECCCCccccCCccce-eeccCCCcceE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEE
Confidence 999999998764 45666 2211100 00000 00000000000 1122333 44555665 4688999998876543
Q ss_pred cCC-CCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeee
Q 044265 226 YPP-LDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMG 304 (517)
Q Consensus 226 ~p~-~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~ 304 (517)
+.. .+. .. ......+.. +..++.+++.|+.+. .+..+|+......-....-.......
T Consensus 196 ~~~~~~~---~h--~~~v~~~~~--~~~~~~~l~sgs~D~--------------~v~~wd~~~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 196 FGSEFPS---GH--TADVLSLSI--NSLNANMFISGSCDT--------------TVRLWDLRITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp ECCCSSS---SC--CSCEEEEEE--CSSSCCEEEEEETTS--------------CEEEEETTTTCCCCEEECCCSSCCCE
T ss_pred eecccCC---CC--ccCeEEEEe--ecCCCCEEEEEECCC--------------eEEEEECCCCCcceEEECCcCCCeEE
Confidence 311 111 11 111111100 112678888888762 12334443111111111111222222
Q ss_pred eeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceec-cCCCCCc----cccccceeeecCCCcEEEecC
Q 044265 305 DMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFM-TLNPGTI----PRMYHSTANLLPDGRVLIAGS 379 (517)
Q Consensus 305 ~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~----~R~yhs~a~ll~dG~V~v~GG 379 (517)
....|||+.++.|+.+ + ++.+||..+. +-. ....... ....-......+||+.+++|+
T Consensus 255 -v~~~p~~~~l~s~s~D-~------------~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 255 -VKFFPDGQRFGTGSDD-G------------TCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp -EEECTTSSEEEEECSS-S------------CEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred -EEEecCCCeEEEEcCC-C------------eEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCCEEEEEE
Confidence 2455899999998876 3 3688998876 321 1111000 001112345579999999998
Q ss_pred CCc
Q 044265 380 NPH 382 (517)
Q Consensus 380 ~~~ 382 (517)
.+.
T Consensus 318 ~dg 320 (380)
T 3iz6_a 318 SNG 320 (380)
T ss_dssp TTS
T ss_pred CCC
Confidence 653
No 45
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.87 E-value=0.0029 Score=63.93 Aligned_cols=258 Identities=16% Similarity=0.201 Sum_probs=127.1
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCC-CCceEeccCccccCcC-cccee
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANG-LCDWVELDDVELVNGR-WYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~-t~~W~~~~~~~m~~~R-~~~s~ 147 (517)
.+.+||..+++-...-..+.......++.+||+.+++||.+ ..+.+||...... ....... ..+.... .-.++
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~~~~~~~~~~~~~--~~~~gh~~~v~~~ 163 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLSSQADRDGNMPVS--RVLTGHKGYASSC 163 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECCCCSSCCCSSTTC--CBCCCCSSCCCCC
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECCCCccccCCccce--eeccCCCcceEEE
Confidence 57899998877655444455555556778999999999975 5788888752100 0000000 0111111 11223
Q ss_pred EEcCC-CcEEEEcCCCCCceEEe-CCCCCcee-cc-chhhccccccCCCCceEEEc-cCCcEEEEEC--CceEEEeCCCC
Q 044265 148 QILPD-GSVIILGGKGANTVEYY-PPRNGAVS-FP-FLADVEDKQMDNLYPYVHLL-PNGHLFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 148 ~~L~d-G~v~vvGG~~~~~~E~y-P~~~~w~~-~~-~l~~t~~~~~~~~yp~~~~~-~~G~iyv~Gg--~~~~~ydp~t~ 220 (517)
...++ +..++.|+.+ .++.+| ..+.+... .. ..... +..... .+... .++++++.|+ ..+.+||.+..
T Consensus 164 ~~~~~~~~~l~s~s~D-~~i~~wd~~~~~~~~~~~~~~~~~---h~~~v~-~~~~~~~~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 164 QYVPDQETRLITGSGD-QTCVLWDVTTGQRISIFGSEFPSG---HTADVL-SLSINSLNANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp BCCSSSSSCEEEECTT-SCEEEECTTTCCEEEEECCCSSSS---CCSCEE-EEEECSSSCCEEEEEETTSCEEEEETTTT
T ss_pred EEecCCCCEEEEECCC-CcEEEEEcCCCcEEEEeecccCCC---CccCeE-EEEeecCCCCEEEEEECCCeEEEEECCCC
Confidence 33443 3445666544 567777 44433221 10 00000 000000 12222 3788999887 46889998743
Q ss_pred -eEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCC--CCceecC-
Q 044265 221 -KIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSAD--PTWEMED- 296 (517)
Q Consensus 221 -~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~--~~W~~~~- 296 (517)
+-...+ .+. ...- -+....| +++.++.|+.+. . +..+|+.... ..+....
T Consensus 239 ~~~~~~~---~~h-~~~v--~~v~~~p------~~~~l~s~s~D~-~-------------i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 239 SRAVRTY---HGH-EGDI--NSVKFFP------DGQRFGTGSDDG-T-------------CRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp CCCCEEE---CCC-SSCC--CEEEECT------TSSEEEEECSSS-C-------------EEEEETTTTEEEEEECCCCS
T ss_pred CcceEEE---CCc-CCCe--EEEEEec------CCCeEEEEcCCC-e-------------EEEEECCCCcEEEEeccccc
Confidence 211112 111 1000 1222333 788899998762 1 2223332100 0011110
Q ss_pred ---CCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceec-cCCCC---Cccccccceeeec
Q 044265 297 ---MPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFM-TLNPG---TIPRMYHSTANLL 369 (517)
Q Consensus 297 ---m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~---~~~R~yhs~a~ll 369 (517)
...+-.. ....-|+|++++.|+.+ | .+.+||..+. +-. .+..+ +..+. .+..+-
T Consensus 293 ~~~~~~~~v~-~~~~s~~g~~l~~g~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~h~~~v--~~l~~s 353 (380)
T 3iz6_a 293 RNDNELPIVT-SVAFSISGRLLFAGYSN-G------------DCYVWDTLLA---EMVLNLGTLQNSHEGRI--SCLGLS 353 (380)
T ss_dssp SSCCSSCSCS-EEEECSSSSEEEEECTT-S------------CEEEEETTTC---CEEEEECCSCSSCCCCC--CEEEEC
T ss_pred ccccccCceE-EEEECCCCCEEEEEECC-C------------CEEEEECCCC---ceEEEEecccCCCCCce--EEEEEC
Confidence 0001111 22445899999998765 3 3689998766 321 22111 11122 223457
Q ss_pred CCCcEEEecCCCc
Q 044265 370 PDGRVLIAGSNPH 382 (517)
Q Consensus 370 ~dG~V~v~GG~~~ 382 (517)
|||+.+++||.+.
T Consensus 354 ~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 354 SDGSALCTGSWDK 366 (380)
T ss_dssp SSSSEEEEECTTS
T ss_pred CCCCEEEEeeCCC
Confidence 9999999999764
No 46
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.82 E-value=0.0079 Score=59.56 Aligned_cols=133 Identities=11% Similarity=-0.012 Sum_probs=79.9
Q ss_pred eEEEEECCCCCeE-EccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC------
Q 044265 70 HSAILDLQTNQIR-PLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR------ 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~-~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R------ 142 (517)
.+.++|+.|++.. .++.. ..+.+.++..+|++|+.... ...+.++|+. +.+-... +....
T Consensus 65 ~v~viD~~t~~~~~~i~~~--~~p~~i~~~~~g~lyv~~~~---~~~v~~iD~~----t~~~~~~----i~~g~~~~~~~ 131 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITGF--TSPRYIHFLSDEKAYVTQIW---DYRIFIINPK----TYEITGY----IECPDMDMESG 131 (328)
T ss_dssp EEEEEETTTCCEEEEEECC--SSEEEEEEEETTEEEEEEBS---CSEEEEEETT----TTEEEEE----EECTTCCTTTC
T ss_pred EEEEEECcccEEEEEcCCC--CCCcEEEEeCCCeEEEEECC---CCeEEEEECC----CCeEEEE----EEcCCccccCC
Confidence 4788999998874 34322 22333444488999998743 2689999998 5443321 11122
Q ss_pred ccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCc-eEEEccCCcEEEEEC----------
Q 044265 143 WYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN---------- 209 (517)
Q Consensus 143 ~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg---------- 209 (517)
.-..++. .++++||..-....++.++ +.+.+.. ..+.- ..| .+.+.++|++|+...
T Consensus 132 ~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g----------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 132 STEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG----------IQPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp BCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS----------SCBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred CcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC----------CCccceEEcCCCCEEEEECCCccCCcccc
Confidence 2234444 5889998852123467777 6665433 11110 011 245567999998864
Q ss_pred --CceEEEeCCCCeEEEec
Q 044265 210 --DKAVMYDYETNKIAREY 226 (517)
Q Consensus 210 --~~~~~ydp~t~~w~~~~ 226 (517)
..+.++|+++++..+.+
T Consensus 201 ~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp CCCEEEEEETTTTEEEEEE
T ss_pred CCceEEEEECCCCeEEEEE
Confidence 35889999999876444
No 47
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.0026 Score=62.85 Aligned_cols=143 Identities=9% Similarity=0.036 Sum_probs=80.1
Q ss_pred eEEEEECCCCCeEEccc---c-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCC-CCCceEeccCcccc-CcCc
Q 044265 70 HSAILDLQTNQIRPLMI---L-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEAN-GLCDWVELDDVELV-NGRW 143 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~---~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~-~t~~W~~~~~~~m~-~~R~ 143 (517)
.+.+||..++.+..+.. . +.......++.++|+++++|+.+ ..+++||..... ...++... ..+. ....
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~--~~~~~h~~~ 109 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLL--AIIEGHENE 109 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEE--EEEC----C
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeE--EEEcCCCCc
Confidence 47789988765544322 2 44334455667899999999875 679999875210 01123222 1222 1223
Q ss_pred cceeEEcCCCcEEEEcCCCCCceEEe-CCC--CCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCC
Q 044265 144 YGTDQILPDGSVIILGGKGANTVEYY-PPR--NGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYE 218 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~--~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~ 218 (517)
-.+++.-+||+.++.|+.+ .++.+| ... ..+.....+... . ..-..+...+++++++.|+ ..+.+||..
T Consensus 110 V~~v~~sp~g~~las~s~D-~~v~iwd~~~~~~~~~~~~~~~~h----~-~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRD-KSVWIWETDESGEEYECISVLQEH----S-QDVKHVIWHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp EEEEEECTTSCEEEEEETT-SCEEEEECCTTCCCCEEEEEECCC----S-SCEEEEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCC-CEEEEEeccCCCCCeEEEEEeccC----C-CceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 3456667899998888865 467777 422 222221111110 0 0011244457999998887 468899988
Q ss_pred CCeEE
Q 044265 219 TNKIA 223 (517)
Q Consensus 219 t~~w~ 223 (517)
++.|.
T Consensus 184 ~~~~~ 188 (330)
T 2hes_X 184 DDDWE 188 (330)
T ss_dssp TTEEE
T ss_pred CCCee
Confidence 77664
No 48
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.81 E-value=0.0017 Score=62.99 Aligned_cols=217 Identities=12% Similarity=0.033 Sum_probs=119.4
Q ss_pred CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCC--ce
Q 044265 100 DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNG--AV 176 (517)
Q Consensus 100 dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~--w~ 176 (517)
.|+++++|..+ ..+.++|++++ +-.|+-. .......+.+..++||++|+.+ ...+..| | +.+ |.
T Consensus 4 ~~~~lv~~~~~---~~v~~~d~~tG--~~~w~~~----~~~~~~~~~~~~~pdG~ilvs~---~~~V~~~d~-~G~~~W~ 70 (276)
T 3no2_A 4 PQHLLVGGSGW---NKIAIINKDTK--EIVWEYP----LEKGWECNSVAATKAGEILFSY---SKGAKMITR-DGRELWN 70 (276)
T ss_dssp CCEEEEECTTC---SEEEEEETTTT--EEEEEEE----CCTTCCCCEEEECTTSCEEEEC---BSEEEEECT-TSCEEEE
T ss_pred CCcEEEeeCCC---CEEEEEECCCC--eEEEEeC----CCccCCCcCeEECCCCCEEEeC---CCCEEEECC-CCCEEEE
Confidence 46788887653 68999999743 4567643 1111235677889999999943 2456667 6 332 44
Q ss_pred eccchhhccccccCCCCceEEEccCCcEEEEECC---ceEEEeCCCC-eEEEecCC-CCCCCCCCCCCCceeeeecccCc
Q 044265 177 SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND---KAVMYDYETN-KIAREYPP-LDGGPRNYPSAGSSAMLALEGDF 251 (517)
Q Consensus 177 ~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~---~~~~ydp~t~-~w~~~~p~-~p~~~r~~~~~g~~v~l~~~~~~ 251 (517)
.... .. .. ...+..++||++++.... .+..+|+... .|...+.. ++. ....+ .+.+ .++
T Consensus 71 ~~~~--~~-----~~-~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~-~~~~~-~~v~-~~~----- 134 (276)
T 3no2_A 71 IAAP--AG-----CE-MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER-PHAQF-RQIN-KNK----- 134 (276)
T ss_dssp EECC--TT-----CE-EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSS-GGGSC-SCCE-ECT-----
T ss_pred EcCC--CC-----cc-ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCc-ccccc-cCce-ECC-----
Confidence 2110 00 00 113456789999987543 4667788443 23322211 111 00111 1222 232
Q ss_pred cccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCC
Q 044265 252 ATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMAS 331 (517)
Q Consensus 252 ~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~ 331 (517)
+|.++++...+ ..+..+|+. ..-.|+...-. +. +++..+++|.++|++... +
T Consensus 135 -~G~~lv~~~~~--------------~~v~~~d~~-G~~~w~~~~~~--~~-~~~~~~~~g~~~v~~~~~-~-------- 186 (276)
T 3no2_A 135 -KGNYLVPLFAT--------------SEVREIAPN-GQLLNSVKLSG--TP-FSSAFLDNGDCLVACGDA-H-------- 186 (276)
T ss_dssp -TSCEEEEETTT--------------TEEEEECTT-SCEEEEEECSS--CC-CEEEECTTSCEEEECBTT-S--------
T ss_pred -CCCEEEEecCC--------------CEEEEECCC-CCEEEEEECCC--Cc-cceeEcCCCCEEEEeCCC-C--------
Confidence 78888765433 224456654 34567764111 11 234677899999986542 1
Q ss_pred CCccccEEEeCCCCCCceeccCC-CCCcccc-ccceeeecCCCcEEEec
Q 044265 332 NPCLFPVLYRPTQPAGLRFMTLN-PGTIPRM-YHSTANLLPDGRVLIAG 378 (517)
Q Consensus 332 ~~~~~~e~YdP~t~~g~~W~~~~-~~~~~R~-yhs~a~ll~dG~V~v~G 378 (517)
.+..+||++.. ..|+.-. ...-.|+ +...+.+++||.+||+.
T Consensus 187 ----~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 187 ----CFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ----EEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred ----eEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 36889998651 2565422 1121232 33446678999999997
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.80 E-value=0.016 Score=58.08 Aligned_cols=235 Identities=14% Similarity=0.150 Sum_probs=119.0
Q ss_pred ecCCCcEEEecCCCC--------CCCeEEEecCCCCCCCCceEeccCcccc---CcCcc-ceeEEcCCCcEEEEc-CCCC
Q 044265 97 ILADGTVLQTGGDLD--------GYKKIRKFSPCEANGLCDWVELDDVELV---NGRWY-GTDQILPDGSVIILG-GKGA 163 (517)
Q Consensus 97 ~l~dG~l~v~GG~~~--------g~~~v~~ydp~~~~~t~~W~~~~~~~m~---~~R~~-~s~~~L~dG~v~vvG-G~~~ 163 (517)
+-.++.+++.|.... ....+++|+.... ............. ....| -.++.-|||+.++++ |...
T Consensus 79 ~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d 156 (365)
T 4h5i_A 79 IDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKV--NDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVP 156 (365)
T ss_dssp EEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETT--TTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSS
T ss_pred EEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCC--CceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCC
Confidence 345788888886542 1356888875421 1222111001111 11112 245677899987664 4445
Q ss_pred CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-CceEEEeCCCCeEEEecCCCCCCCCCCCCCCc
Q 044265 164 NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-DKAVMYDYETNKIAREYPPLDGGPRNYPSAGS 241 (517)
Q Consensus 164 ~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~ 241 (517)
.++.+| +.+...... +... ...+ .+...+||++++.+. ....+|+..+++....... .. ....- .+
T Consensus 157 ~~i~iwd~~~~~~~~~--~~~~-----~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~-~~--~~~~v-~~ 224 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFE--IETR-----GEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTD-FD--KNWSL-SK 224 (365)
T ss_dssp CEEEEEETTTTEEEEE--EECS-----SCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEECC-CC--TTEEE-EE
T ss_pred CEEEEeECCCCcEEEE--eCCC-----CceE-EEEEccCCceEEeccceeEEEEEeccCcceeeeec-CC--CCCCE-EE
Confidence 678888 654332211 1100 1111 356678999988876 4577888887765432211 11 11100 11
Q ss_pred eeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec---CCC--cceeeeeeEEecCCcEEE
Q 044265 242 SAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME---DMP--FGRIMGDMVMLPTGDVLI 316 (517)
Q Consensus 242 ~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~---~m~--~~R~~~~~v~lpdG~v~v 316 (517)
....| +++.++.++.+.+. ......++... ..+... .+. ..... +...-|||++++
T Consensus 225 v~fsp------dg~~l~~~s~d~~~----------~~~i~~~~~~~--~~~~~~~~~~~~~~~~~V~-~~~~Spdg~~la 285 (365)
T 4h5i_A 225 INFIA------DDTVLIAASLKKGK----------GIVLTKISIKS--GNTSVLRSKQVTNRFKGIT-SMDVDMKGELAV 285 (365)
T ss_dssp EEEEE------TTEEEEEEEESSSC----------CEEEEEEEEET--TEEEEEEEEEEESSCSCEE-EEEECTTSCEEE
T ss_pred EEEcC------CCCEEEEEecCCcc----------eeEEeeccccc--ceecceeeeeecCCCCCeE-eEEECCCCCceE
Confidence 22333 78888888765221 11122333331 111111 111 11122 223458999999
Q ss_pred EcCccCCCCCcccCCCCccccEEEeCCCCCCceec-cCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 317 INGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFM-TLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 317 ~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
+|+.+ + ++.+||.++. +-. .+...+..... .....|||+.|+.|+.++
T Consensus 286 sgs~D-~------------~V~iwd~~~~---~~~~~~~~gH~~~V~--~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 286 LASND-N------------SIALVKLKDL---SMSKIFKQAHSFAIT--EVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEETT-S------------CEEEEETTTT---EEEEEETTSSSSCEE--EEEECTTSCEEEEEETTS
T ss_pred EEcCC-C------------EEEEEECCCC---cEEEEecCcccCCEE--EEEECCCCCEEEEEeCCC
Confidence 98865 2 4789998876 421 21111111111 234579999999998754
No 50
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.78 E-value=0.0022 Score=64.97 Aligned_cols=233 Identities=10% Similarity=0.076 Sum_probs=119.2
Q ss_pred ccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceE-----eccCcccc-CcCccceeEEcCCC-cEEEEcCCCC
Q 044265 92 CSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWV-----ELDDVELV-NGRWYGTDQILPDG-SVIILGGKGA 163 (517)
Q Consensus 92 c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~-----~~~~~~m~-~~R~~~s~~~L~dG-~v~vvGG~~~ 163 (517)
.....+.+ +++++++|+.+ ..+++||.. +.... .. ..+. ....-.+++..++| .+++.|+.+
T Consensus 84 V~~~~~~p~~~~~l~s~s~d---g~v~vw~~~----~~~~~~~~~~~~--~~~~~h~~~v~~~~~~p~~~~~l~s~~~d- 153 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSED---CTVMVWEIP----DGGLVLPLREPV--ITLEGHTKRVGIVAWHPTAQNVLLSAGCD- 153 (402)
T ss_dssp EEEEEECTTCTTEEEEEETT---SEEEEEECC----TTCCSSCBCSCS--EEEECCSSCEEEEEECSSBTTEEEEEETT-
T ss_pred EEEEEeCCCCCCEEEEEeCC---CeEEEEEcc----CCCCccccCCce--EEecCCCCeEEEEEECcCCCCEEEEEcCC-
Confidence 33455667 89999999864 679999987 33221 11 1222 22334456677787 588888765
Q ss_pred CceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCC
Q 044265 164 NTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSA 239 (517)
Q Consensus 164 ~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~ 239 (517)
..+.+| ..+.+.. .... ... . ..-..+...++|++++.|+ ..+.+||+.+++....+..... ....
T Consensus 154 g~i~iwd~~~~~~~~~~~~-~~~----~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~-- 223 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGP-DVH----P-DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE--GTRP-- 223 (402)
T ss_dssp SCEEEEETTTTEEEEEECT-TTC----C-SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSC--SSSC--
T ss_pred CEEEEEECCCCCccEEEec-CCC----C-CceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCC--CCcc--
Confidence 457777 4433222 1100 000 0 0111345567998888886 4688999999876644311110 0001
Q ss_pred CceeeeecccCccccEEEEEc---CCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeeeEEecCCcEEE
Q 044265 240 GSSAMLALEGDFATAVIVVCG---GAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDMVMLPTGDVLI 316 (517)
Q Consensus 240 g~~v~l~~~~~~~~gkI~v~G---G~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~v~lpdG~v~v 316 (517)
...+..| +++++++| +.+ ..+..+|+......-....+.....-.....-+||+.++
T Consensus 224 ~~~~~~~------~~~~l~~g~~~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 224 VHAVFVS------EGKILTTGFSRMSE--------------RQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp CEEEECS------TTEEEEEEECTTCC--------------EEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEE
T ss_pred eEEEEcC------CCcEEEEeccCCCC--------------ceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEE
Confidence 1222333 78888888 332 223445544211101111222211122224458888776
Q ss_pred EcCccCCCCCcccCCCCccccEEEeCCCCCCce--eccCCCCCccccccceeeecCCCcEEEecCC
Q 044265 317 INGAQAGTQGFEMASNPCLFPVLYRPTQPAGLR--FMTLNPGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 317 ~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~--W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
+.|...| .+.+||..+. + ...+...... .........|||++++.+++
T Consensus 284 ~~g~~dg------------~i~i~d~~~~---~~~~~~l~~~~~~-~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 284 LCGKGDS------------SIRYFEITSE---APFLHYLSMFSSK-ESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp EEETTCS------------CEEEEEECSS---TTCEEEEEEECCS-SCCSEEEECCGGGSCGGGTE
T ss_pred EEEcCCC------------eEEEEEecCC---CcceEeecccccC-CcccceEEecccccceecce
Confidence 5443212 3688888776 3 2222211111 11123455789998887654
No 51
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.77 E-value=0.005 Score=60.99 Aligned_cols=225 Identities=15% Similarity=0.189 Sum_probs=119.5
Q ss_pred ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCCCceEEe-CC
Q 044265 94 SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGANTVEYY-PP 171 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~ 171 (517)
+..+.+||+++++|+.+ ..+++||.. +.+-... +. ...+-.+++..++|+.++.||.+ ..+.+| ..
T Consensus 60 ~~~~s~d~~~l~s~s~D---g~v~iWd~~----~~~~~~~----~~~~~~~v~~~~~s~~~~~l~s~~~d-~~v~iw~~~ 127 (340)
T 1got_B 60 AMHWGTDSRLLLSASQD---GKLIIWDSY----TTNKVHA----IPLRSSWVMTCAYAPSGNYVACGGLD-NICSIYNLK 127 (340)
T ss_dssp EEEECTTSSEEEEEETT---TEEEEEETT----TCCEEEE----EECSSSCEEEEEECTTSSEEEEEETT-CEEEEEETT
T ss_pred EEEECCCCCEEEEEeCC---CcEEEEECC----CCCcceE----eecCCccEEEEEECCCCCEEEEEeCC-CeEEEEECc
Confidence 34566899999999875 689999987 3332221 22 22334566777899999999876 457777 43
Q ss_pred CCC--ceeccchhhccccccCCCCceEEEccCCcEEEEEC-CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecc
Q 044265 172 RNG--AVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALE 248 (517)
Q Consensus 172 ~~~--w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~ 248 (517)
+.. ......+.. +. ..-..+...++++++..++ ..+.+||..+++....+ .+. .... -+..+.|
T Consensus 128 ~~~~~~~~~~~~~~----h~-~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h-~~~v--~~~~~~~-- 194 (340)
T 1got_B 128 TREGNVRVSRELAG----HT-GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TGH-TGDV--MSLSLAP-- 194 (340)
T ss_dssp TCSBSCEEEEEEEC----CS-SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CCC-SSCE--EEEEECT--
T ss_pred cCCCcceeEEEecC----CC-ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cCC-CCce--EEEEECC--
Confidence 321 111111110 00 0111233345777555443 46889999998765443 211 1000 0112222
Q ss_pred cCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCc
Q 044265 249 GDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGF 327 (517)
Q Consensus 249 ~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~ 327 (517)
+++++++|+.+. . +..+|+.. ..-... .-....... ....|+|+.+++|+.+ |
T Consensus 195 ----~~~~l~sg~~d~-~-------------v~~wd~~~--~~~~~~~~~h~~~v~~-v~~~p~~~~l~s~s~d-~---- 248 (340)
T 1got_B 195 ----DTRLFVSGACDA-S-------------AKLWDVRE--GMCRQTFTGHESDINA-ICFFPNGNAFATGSDD-A---- 248 (340)
T ss_dssp ----TSSEEEEEETTS-C-------------EEEEETTT--CSEEEEECCCSSCEEE-EEECTTSSEEEEEETT-S----
T ss_pred ----CCCEEEEEeCCC-c-------------EEEEECCC--CeeEEEEcCCcCCEEE-EEEcCCCCEEEEEcCC-C----
Confidence 678888888762 1 22344331 110000 111222222 2455899999998865 2
Q ss_pred ccCCCCccccEEEeCCCCCCceec-cCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 328 EMASNPCLFPVLYRPTQPAGLRFM-TLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 328 ~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
++.+||..+. +-. ....... ...-......|||+++++|+.+
T Consensus 249 --------~v~iwd~~~~---~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 249 --------TCRLFDLRAD---QELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp --------CEEEEETTTT---EEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred --------cEEEEECCCC---cEEEEEccCCc-ccceEEEEECCCCCEEEEECCC
Confidence 3688998876 321 1111000 0011123457999999999865
No 52
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.75 E-value=0.0047 Score=61.81 Aligned_cols=133 Identities=6% Similarity=-0.043 Sum_probs=79.8
Q ss_pred eEEEEECCCCCeEEccc--cCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 70 HSAILDLQTNQIRPLMI--LTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
.+.+||..+++...... .+.....+..+.+ +++++++|+.+ ..+++||.. +....... ..-....+-.+
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~----~~~~~~~~-~~~~~~~~v~~ 168 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS----GSVIQVFA-KTDSWDYWYCC 168 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT----SCEEEEEE-CCCCSSCCEEE
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC----CCceEEEe-ccCCCCCCeEE
Confidence 47899999888766543 2444444455667 67899998864 689999987 44444330 11111233456
Q ss_pred eEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEECC--ceEEEeCCC
Q 044265 147 DQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAND--KAVMYDYET 219 (517)
Q Consensus 147 ~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg~--~~~~ydp~t 219 (517)
++..++++.++.|+.+ ..+.+| ......... ... ...-..+...++++ +++.|+. .+.+||..+
T Consensus 169 ~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~---~~h-----~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 169 VDVSVSRQMLATGDST-GRLLLLGLDGHEIFKE---KLH-----KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEETTTTEEEEEETT-SEEEEEETTSCEEEEE---ECS-----SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEECCCCCEEEEECCC-CCEEEEECCCCEEEEe---ccC-----CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 6777899999988865 456777 421111111 000 00111345567888 8888764 588999887
No 53
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.75 E-value=0.03 Score=53.28 Aligned_cols=132 Identities=16% Similarity=0.144 Sum_probs=74.2
Q ss_pred eEEEEECCCCCeEEcccc-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCcccee
Q 044265 70 HSAILDLQTNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~ 147 (517)
.+..||+. +++...... ......+.++..+|++++.... ...+.+||+. .++... .++ ....-.++
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-----g~~~~~---~~~~~~~~~~~i 104 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKK-----GIIKEY---TLPNPDSAPYGI 104 (299)
T ss_dssp EEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT-----SCEEEE---ECSSTTCCEEEE
T ss_pred cEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCC-----CcEEEE---eCCCcCCCceee
Confidence 36688888 777765432 2222334445578999998643 2568889986 234333 122 12233455
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCcEEEEEC--CceEEEeCCCCeEE
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
+.-++|++|+.... ...+.+| + +.+...... ... ...+ ...+.++|++|+... ..+.+||+ +++..
T Consensus 105 ~~~~~g~l~v~~~~-~~~i~~~d~-~g~~~~~~~-~~~------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 105 TEGPNGDIWFTEMN-GNRIGRITD-DGKIREYEL-PNK------GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp EECTTSCEEEEETT-TTEEEEECT-TCCEEEEEC-SST------TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred EECCCCCEEEEecC-CceEEEECC-CCCEEEecC-CCC------CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 66678999987543 2345556 5 333321111 000 1122 234456899999763 56889999 66665
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.74 E-value=0.0058 Score=64.71 Aligned_cols=243 Identities=11% Similarity=0.103 Sum_probs=127.5
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+.....+.. +.....+.++.+||+.+++|+.+ ..+++||.. ...-... ......-.+++.
T Consensus 326 ~i~~w~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~----~~~~~~~----~~~~~~v~~~~~ 393 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTG-HSSSVWGVAFSPDGQTIASASDD---KTVKLWNRN----GQLLQTL----TGHSSSVRGVAF 393 (577)
T ss_dssp CEEEEETTSCEEEEECC-CSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----CCEEEEE----ECCSSCEEEEEE
T ss_pred eEEEEeCCCCeeEEEeC-CCCCEEEEEECCCCCEEEEEeCC---CEEEEEcCC----CCEEEEe----cCCCCCeEEEEE
Confidence 46788877665544432 23333345677899999998864 578999965 2222222 111222334566
Q ss_pred cCCCcEEEEcCCCCCceEEeCCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEecC
Q 044265 150 LPDGSVIILGGKGANTVEYYPPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREYP 227 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~yP~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~p 227 (517)
.+||+.++.|+.+ ..+.+|..+.+... .+.. +. ..-..+...+|++.++.++ ..+.+||....... .+.
T Consensus 394 s~dg~~l~~~~~d-~~v~~~~~~~~~~~--~~~~----~~-~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~-~~~ 464 (577)
T 2ymu_A 394 SPDGQTIASASDD-KTVKLWNRNGQLLQ--TLTG----HS-SSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQ-TLT 464 (577)
T ss_dssp CTTSSCEEEEETT-SEEEEECTTCCEEE--EEEC----CS-SCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEE-EEE
T ss_pred CCCCCEEEEEeCC-CEEEEEeCCCCEEE--EecC----CC-CCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEE-EEc
Confidence 7899998888765 45677733222111 0100 00 0111345568999888876 45788997554332 331
Q ss_pred CCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcceeeeee
Q 044265 228 PLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFGRIMGDM 306 (517)
Q Consensus 228 ~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~R~~~~~ 306 (517)
+. .. + -.++.+. .+++++++|+.+. . +..+|.. .+-... .-...+...-
T Consensus 465 ---~~-~~-~--v~~~~~s-----pd~~~las~~~d~-~-------------i~iw~~~---~~~~~~~~~h~~~v~~l- 514 (577)
T 2ymu_A 465 ---GH-SS-S--VRGVAFS-----PDGQTIASASDDK-T-------------VKLWNRN---GQLLQTLTGHSSSVRGV- 514 (577)
T ss_dssp ---CC-SS-C--EEEEEEC-----TTSCEEEEEETTS-E-------------EEEEETT---SCEEEEEECCSSCEEEE-
T ss_pred ---CC-CC-C--EEEEEEc-----CCCCEEEEEeCCC-E-------------EEEEcCC---CCEEEEEeCCCCCEEEE-
Confidence 11 11 0 0122222 1788898887652 1 2223321 111001 1112223222
Q ss_pred EEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 307 VMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 307 v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
...|||+.++.|+.+ + .+.+||.... ....+... .... ......|||+.|++||.+.
T Consensus 515 ~~s~dg~~l~s~~~d-g------------~v~lwd~~~~---~~~~~~~h-~~~v--~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 515 AFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGH-SSSV--WGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp EECTTSSCEEEEETT-S------------EEEEECTTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEETTS
T ss_pred EEcCCCCEEEEEECc-C------------EEEEEeCCCC---EEEEEcCC-CCCE--EEEEEcCCCCEEEEEeCCC
Confidence 455899999998765 2 3688985433 43332111 1111 1234579999999988653
No 55
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.72 E-value=0.0052 Score=65.30 Aligned_cols=268 Identities=10% Similarity=0.009 Sum_probs=141.6
Q ss_pred EEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCC----CeEEccccCCCc-ccceeecC
Q 044265 25 HTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTN----QIRPLMILTDTW-CSSGQILA 99 (517)
Q Consensus 25 h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~----~w~~l~~~~~~~-c~~~~~l~ 99 (517)
.+++-++|+.+++++ + + .+.+||..++ +....-..+... -...++.+
T Consensus 23 ~~~~spdg~~l~~~~-~----------~-----------------~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp 74 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPC-G----------K-----------------SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 74 (615)
T ss_dssp CCEEETTTTEEEEEE-T----------T-----------------EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECS
T ss_pred EEEECCCCCEEEEec-C----------C-----------------eEEEEECCCCCCccccceEEecCCCceEEEEEECc
Confidence 345668999888875 1 1 4778998876 433322334433 34556778
Q ss_pred --CCcEEEecCCCCCCCeEEEecCCCCCCCC------ceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCCC---ceE
Q 044265 100 --DGTVLQTGGDLDGYKKIRKFSPCEANGLC------DWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGAN---TVE 167 (517)
Q Consensus 100 --dG~l~v~GG~~~g~~~v~~ydp~~~~~t~------~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~~---~~E 167 (517)
||+++++|+.+ ..+++||.. +. ..... ..+. ....-.+++..+||+.+++++.+.. .+.
T Consensus 75 ~~~~~~l~s~~~d---g~v~vw~~~----~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 75 IKGSQYLCSGDES---GKVIVWGWT----FDKESNSVEVNVK--SEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp STTCCEEEEEETT---SEEEEEEEE----EEGGGTEEEEEEE--EEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEE
T ss_pred CCCCCEEEEecCC---CEEEEEeCC----CCccccccccccc--chhhcccccEEEEEEeCCCCEEEEeccCCCCccEEE
Confidence 99999999874 579999985 22 22222 2222 2334556677889999999886531 233
Q ss_pred EeCCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEEC--CceEEEeCCCCeEEEecCCCCCCCC-CCCCCCcee
Q 044265 168 YYPPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DKAVMYDYETNKIAREYPPLDGGPR-NYPSAGSSA 243 (517)
Q Consensus 168 ~yP~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r-~~~~~g~~v 243 (517)
+|. ..+.. ..+... ...-..+...++|+ +++.|+ ..+.+||..+.+....+.. ... ..+- -+..
T Consensus 146 ~~d-~~~~~--~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~v-~~~~ 213 (615)
T 1pgu_A 146 SWD-SGNSL--GEVSGH-----SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT---HHKQGSFV-RDVE 213 (615)
T ss_dssp ETT-TCCEE--EECCSC-----SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS---SSCTTCCE-EEEE
T ss_pred EEE-CCCcc--eeeecC-----CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc---cCCCCceE-EEEE
Confidence 332 11111 001100 00111345567886 677776 4688999988776544421 111 0000 0122
Q ss_pred eeecccCccc-cEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCC-----C-cceeeeeeEEecCCcEEE
Q 044265 244 MLALEGDFAT-AVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDM-----P-FGRIMGDMVMLPTGDVLI 316 (517)
Q Consensus 244 ~l~~~~~~~~-gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m-----~-~~R~~~~~v~lpdG~v~v 316 (517)
..| + ++.+++|+.+. .+..+|+.. .+... .+ . ..... +.... +++.++
T Consensus 214 ~~~------~~~~~l~~~~~dg--------------~i~vwd~~~--~~~~~-~~~~~~~~~~~~v~-~~~~~-~~~~l~ 268 (615)
T 1pgu_A 214 FSP------DSGEFVITVGSDR--------------KISCFDGKS--GEFLK-YIEDDQEPVQGGIF-ALSWL-DSQKFA 268 (615)
T ss_dssp ECS------TTCCEEEEEETTC--------------CEEEEETTT--CCEEE-ECCBTTBCCCSCEE-EEEES-SSSEEE
T ss_pred ECC------CCCCEEEEEeCCC--------------eEEEEECCC--CCEeE-EecccccccCCceE-EEEEc-CCCEEE
Confidence 222 5 78888887652 123344431 11111 11 1 12222 22333 899999
Q ss_pred EcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCC-ccccccceeeecCCCcEEEecCCCc
Q 044265 317 INGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGT-IPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 317 ~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~-~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
+++.+ + .+.+||..+. +-...-... .+......++..++++.+++|+...
T Consensus 269 ~~~~d-~------------~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 269 TVGAD-A------------TIRVWDVTTS---KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp EEETT-S------------EEEEEETTTT---EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred EEcCC-C------------cEEEEECCCC---cEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 88765 2 3688998876 432211111 1111112234446888888888654
No 56
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.70 E-value=0.011 Score=63.86 Aligned_cols=136 Identities=8% Similarity=0.008 Sum_probs=76.7
Q ss_pred eEEEEECCCCCeEEcc-c------cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC
Q 044265 70 HSAILDLQTNQIRPLM-I------LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~-~------~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R 142 (517)
.+.+||..+++..... . .|.....+.++.+||+.+++|+.+ +.+++||.. +.+.... -.....-
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~----~~~~~~~--~~~~~~~ 283 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA----TLKVEKT--IPVGTRI 283 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----TTEEEEE--EECCSSG
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC----CCceeee--ecCCCCc
Confidence 4789998887754322 1 344444456677899999999875 689999987 4444332 1111110
Q ss_pred -ccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCC
Q 044265 143 -WYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYE 218 (517)
Q Consensus 143 -~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~ 218 (517)
.....+.. +++.++.++.+ ..+.+| +....... .+.. + ...-..+...+||+.++.|+ ..+.+||..
T Consensus 284 ~~~~~~~~~-~~~~l~s~s~d-~~i~~~~~~~~~~~~--~~~g----h-~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 284 EDQQLGIIW-TKQALVSISAN-GFINFVNPELGSIDQ--VRYG----H-NKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp GGCEEEEEE-CSSCEEEEETT-CCEEEEETTTTEEEE--EECC----C-SSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cceeEEEEE-cCCEEEEEeCC-CcEEEEeCCCCCcce--EEcC----C-CCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 01112223 67777776654 456677 44322110 0100 0 01111345567999888886 467889988
Q ss_pred CCeEE
Q 044265 219 TNKIA 223 (517)
Q Consensus 219 t~~w~ 223 (517)
+++..
T Consensus 355 ~~~~~ 359 (611)
T 1nr0_A 355 TGISN 359 (611)
T ss_dssp TCCEE
T ss_pred CCcee
Confidence 76654
No 57
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.69 E-value=0.0039 Score=69.12 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=92.3
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQ 105 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 105 (517)
.+.-++|+.++.++.+ | .+.+||..+++....-..+.....+..+.+||+.++
T Consensus 19 i~~sp~~~~la~~~~~----------g-----------------~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 71 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYS----------G-----------------RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWII 71 (814)
T ss_dssp EEECSSSSEEEEEETT----------S-----------------EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEE
T ss_pred EEECCCCCEEEEEeCC----------C-----------------EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEE
Confidence 3455788888887632 2 478999988776554444555555667788999999
Q ss_pred ecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhh
Q 044265 106 TGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLAD 183 (517)
Q Consensus 106 ~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~ 183 (517)
+|+.+ ..+.+||.. +.+.... +. ....-.+++..++|+.+++|+.+ .++.+| ..++ +.....+..
T Consensus 72 ~~~~d---g~i~vw~~~----~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vw~~~~~-~~~~~~~~~ 138 (814)
T 3mkq_A 72 VGSDD---FRIRVFNYN----TGEKVVD----FEAHPDYIRSIAVHPTKPYVLSGSDD-LTVKLWNWENN-WALEQTFEG 138 (814)
T ss_dssp EEETT---SEEEEEETT----TCCEEEE----EECCSSCEEEEEECSSSSEEEEEETT-SEEEEEEGGGT-SEEEEEEEC
T ss_pred EEeCC---CeEEEEECC----CCcEEEE----EecCCCCEEEEEEeCCCCEEEEEcCC-CEEEEEECCCC-ceEEEEEcC
Confidence 99874 689999987 4444322 22 22233456677899988888754 457777 3322 221111110
Q ss_pred ccccccCCCCceEEEcc-CCcEEEEEC--CceEEEeCCCCe
Q 044265 184 VEDKQMDNLYPYVHLLP-NGHLFIFAN--DKAVMYDYETNK 221 (517)
Q Consensus 184 t~~~~~~~~yp~~~~~~-~G~iyv~Gg--~~~~~ydp~t~~ 221 (517)
. . ..-..+...+ +|+++++|+ ..+.+||..+.+
T Consensus 139 ~----~-~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 139 H----E-HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp C----S-SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred C----C-CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 0 0 0011234456 788888876 468899987654
No 58
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.67 E-value=0.047 Score=52.70 Aligned_cols=167 Identities=13% Similarity=0.199 Sum_probs=95.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~~s~~ 148 (517)
.+.+||..+++-...-..+........+.++++++++|+.+ ..+++||.. +.+-.. .+.. ...-.+++
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~----~~~~~~----~~~~~~~~v~~~~ 156 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVK----TGKCLK----TLPAHSDPVSAVH 156 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETT----TCCEEE----EECCCSSCEEEEE
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECC----CCEEEE----EecCCCCcEEEEE
Confidence 57899998877554333344433445567899999999875 579999987 333221 1222 12233455
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEe
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIARE 225 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~ 225 (517)
..++|+.++.|+.+ ..+.+| ..+.+.... .... .......+...++|+.++.|+ ..+.+||..+.+-...
T Consensus 157 ~~~~~~~l~~~~~d-~~i~~wd~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 157 FNRDGSLIVSSSYD-GLCRIWDTASGQCLKT-LIDD-----DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp ECTTSSEEEEEETT-SCEEEEETTTCCEEEE-ECCS-----SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEeCC-CcEEEEECCCCceeeE-Eecc-----CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 66789999988865 457777 444332210 0000 000111245567999888886 4688999998876543
Q ss_pred cCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 226 YPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 226 ~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
+..-. ...+. -.....+ .+++++++|+.+
T Consensus 230 ~~~~~--~~~~~--~~~~~~~-----~~~~~l~sg~~d 258 (312)
T 4ery_A 230 YTGHK--NEKYC--IFANFSV-----TGGKWIVSGSED 258 (312)
T ss_dssp ECSSC--CSSSC--CCEEEEC-----SSSCEEEECCTT
T ss_pred EEecC--CceEE--EEEEEEe-----CCCcEEEEECCC
Confidence 32111 11111 1111111 267888888876
No 59
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.66 E-value=0.0077 Score=60.23 Aligned_cols=136 Identities=14% Similarity=0.156 Sum_probs=78.8
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||+.+++.......+. .....++.+||+.+++++..+ ..+.+||.. +.+.... +.....-.+++.
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~----~~~~~~~----~~~~~~~~~~~~ 123 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS--STLSVIDTT----SNTVAGT----VKTGKSPLGLAL 123 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT--TEEEEEETT----TTEEEEE----EECSSSEEEEEE
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCC--CEEEEEECC----CCeEEEE----EeCCCCcceEEE
Confidence 47789999887655433333 334455678888665554432 679999998 4443322 233333456677
Q ss_pred cCCCcEE-EEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCc-EEEEEC--CceEEEeCCCCeEE
Q 044265 150 LPDGSVI-ILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGH-LFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 150 L~dG~v~-vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
.+||+.+ +.++ ....+.+| ..+.+.... +.. ...+ .+...++|+ ||+.+. ..+.+||..+++..
T Consensus 124 s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~--~~~-------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 124 SPDGKKLYVTNN-GDKTVSVINTVTKAVINT--VSV-------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp CTTSSEEEEEET-TTTEEEEEETTTTEEEEE--EEC-------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCCEEEEEeC-CCCEEEEEECCCCcEEEE--Eec-------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 7888855 5544 34567777 544333211 100 0011 344567886 556654 45889999998766
Q ss_pred Eec
Q 044265 224 REY 226 (517)
Q Consensus 224 ~~~ 226 (517)
..+
T Consensus 194 ~~~ 196 (391)
T 1l0q_A 194 DTV 196 (391)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.0087 Score=59.97 Aligned_cols=231 Identities=11% Similarity=0.035 Sum_probs=110.7
Q ss_pred cccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-
Q 044265 91 WCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY- 169 (517)
Q Consensus 91 ~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y- 169 (517)
.....++.+||+++++|+.+ ..+.+||.. ...-... -.....-.+++..++|+.+++++.+ ..+.+|
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d---g~i~i~~~~----~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iwd 177 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN---GELRLWNKT----GALLNVL----NFHRAPIVSVKWNKDGTHIISMDVE-NVTILWN 177 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT---SCEEEEETT----SCEEEEE----CCCCSCEEEEEECTTSSEEEEEETT-CCEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCC---CeEEEEeCC----CCeeeec----cCCCccEEEEEECCCCCEEEEEecC-CeEEEEE
Confidence 33445667899999999864 578999943 2222222 1122334556677899988888765 345666
Q ss_pred CCCCCce-eccchhhcc-------ccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCC
Q 044265 170 PPRNGAV-SFPFLADVE-------DKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSA 239 (517)
Q Consensus 170 P~~~~w~-~~~~l~~t~-------~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~ 239 (517)
..+.... ......... ..........+...+++. +++++ ..+.+||..+++....+. .. ....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~---~~-~~~i-- 250 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPTGKLI---GH-HGPI-- 250 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCSEEEC---CC-SSCE--
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCceeeeec---cC-CCce--
Confidence 3332211 111000000 000000011233345665 44454 468899998765432221 10 1000
Q ss_pred CceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeeeEEecCCcEEEEcC
Q 044265 240 GSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDMVMLPTGDVLIING 319 (517)
Q Consensus 240 g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~v~lpdG~v~v~GG 319 (517)
....+.| +++.+++|+.+. . +..+|+......... .-...... +....++| ++++++
T Consensus 251 ~~~~~~~------~~~~l~~~~~d~-~-------------i~i~d~~~~~~~~~~-~~~~~~i~-~~~~~~~~-~l~~~~ 307 (425)
T 1r5m_A 251 SVLEFND------TNKLLLSASDDG-T-------------LRIWHGGNGNSQNCF-YGHSQSIV-SASWVGDD-KVISCS 307 (425)
T ss_dssp EEEEEET------TTTEEEEEETTS-C-------------EEEECSSSBSCSEEE-CCCSSCEE-EEEEETTT-EEEEEE
T ss_pred EEEEECC------CCCEEEEEcCCC-E-------------EEEEECCCCccceEe-cCCCccEE-EEEECCCC-EEEEEe
Confidence 1122222 677788887652 1 223333211111111 11112222 23455788 777766
Q ss_pred ccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 320 AQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 320 ~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
.+ + .+.+||..+. +-... .......-....+.+||+++++|+.+
T Consensus 308 ~d-~------------~i~i~d~~~~---~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 308 MD-G------------SVRLWSLKQN---TLLAL--SIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp TT-S------------EEEEEETTTT---EEEEE--EECTTCCEEEEEECTTSSEEEEEETT
T ss_pred CC-C------------cEEEEECCCC---cEeEe--cccCCccEEEEEEcCCCCEEEEEECC
Confidence 54 2 3688998776 42211 11111111224457899999999864
No 61
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.65 E-value=0.013 Score=64.20 Aligned_cols=165 Identities=12% Similarity=0.149 Sum_probs=90.5
Q ss_pred eEEEEECCCCCe-----EEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCc
Q 044265 70 HSAILDLQTNQI-----RPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRW 143 (517)
Q Consensus 70 ~~~~yDp~t~~w-----~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~ 143 (517)
.+.+||..++.- ......|.......++.+||+++++|+.+ ..+++||.. +..-.. .+. +...
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~~----~~~~~~----~~~~h~~~ 474 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDLA----AGVSTR----RFVGHTKD 474 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----TTEEEE----EEECCSSC
T ss_pred cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEECC----CCccee----EEeCCCCC
Confidence 477888765431 11122355555556678899999999875 689999987 333221 122 2223
Q ss_pred cceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceec-cchhhccccccCCCCceEEEccCC--cEEEEEC--CceEEEeC
Q 044265 144 YGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSF-PFLADVEDKQMDNLYPYVHLLPNG--HLFIFAN--DKAVMYDY 217 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~-~~l~~t~~~~~~~~yp~~~~~~~G--~iyv~Gg--~~~~~ydp 217 (517)
-.+++..++|+.++.|+.+ .++.+| .....-... ..... + ...-..+...+++ .+++.|+ ..+.+||.
T Consensus 475 v~~~~~s~~~~~l~s~s~D-~~i~iwd~~~~~~~~~~~~~~~----h-~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~ 548 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRD-RTIKLWNTLGECKYTISEGGEG----H-RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 548 (694)
T ss_dssp EEEEEECTTSSCEEEEETT-SCEEEECTTSCEEEEECSSTTS----C-SSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred EEEEEEeCCCCEEEEEeCC-CEEEEEECCCCcceeeccCCCC----C-CCcEEEEEEeCCCCcceEEEEeCCCeEEEEEC
Confidence 4456677899988888865 467777 322111111 00000 0 0111123444565 4666665 46889999
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 218 ETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 218 ~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
.+.+....+ .+. ... -.++.+. .+++++++|+.+
T Consensus 549 ~~~~~~~~~---~~h-~~~---v~~v~~s-----pdg~~l~sg~~D 582 (694)
T 3dm0_A 549 SNCKLRSTL---AGH-TGY---VSTVAVS-----PDGSLCASGGKD 582 (694)
T ss_dssp TTCCEEEEE---CCC-SSC---EEEEEEC-----TTSSEEEEEETT
T ss_pred CCCcEEEEE---cCC-CCC---EEEEEEe-----CCCCEEEEEeCC
Confidence 887765433 211 110 0122221 178889998876
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.65 E-value=0.019 Score=58.87 Aligned_cols=243 Identities=13% Similarity=0.054 Sum_probs=123.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++....-..+..... .+..++..+++|+.+ ..+.+||.. +.+-.. .+...........
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~--~~~~~~~~l~s~s~d---g~i~~wd~~----~~~~~~----~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRD---ATLRVWDIE----TGQCLH----VLMGHVAAVRCVQ 246 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEE--EEEEETTEEEEEETT---SEEEEEESS----SCCEEE----EEECCSSCEEEEE
T ss_pred eEEEEECCcCcEEEEECCCCCcEE--EEEecCCEEEEEeCC---CEEEEEECC----CCcEEE----EEcCCcccEEEEE
Confidence 578899988765433223332221 223367788888764 689999987 333221 1222222222333
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEec
Q 044265 150 LPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREY 226 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~ 226 (517)
. +|+.+++|+.+ ..+.+| ..+..... .+.. ...+...+..+++.++.|+ ..+.+||..+++-...+
T Consensus 247 ~-~~~~l~~~~~d-g~i~iwd~~~~~~~~--~~~~-------~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 247 Y-DGRRVVSGAYD-FMVKVWDPETETCLH--TLQG-------HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 315 (445)
T ss_dssp E-CSSCEEEEETT-SCEEEEEGGGTEEEE--EECC-------CSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred E-CCCEEEEEcCC-CEEEEEECCCCcEeE--EecC-------CCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 4 78888888765 456677 43322110 0100 0112233344888888876 46889999988765443
Q ss_pred CCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCc-ceeeee
Q 044265 227 PPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPF-GRIMGD 305 (517)
Q Consensus 227 p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~-~R~~~~ 305 (517)
. .. .. ....+.+ +++.+++|+.+. .+..+|+.......+. ..+. ......
T Consensus 316 ~---~~-~~----~v~~~~~------~~~~l~~~~~dg--------------~i~vwd~~~~~~~~~~-~~~~~~~~~v~ 366 (445)
T 2ovr_B 316 T---GH-QS----LTSGMEL------KDNILVSGNADS--------------TVKIWDIKTGQCLQTL-QGPNKHQSAVT 366 (445)
T ss_dssp C---CC-CS----CEEEEEE------ETTEEEEEETTS--------------CEEEEETTTCCEEEEE-CSTTSCSSCEE
T ss_pred c---CC-cc----cEEEEEE------eCCEEEEEeCCC--------------eEEEEECCCCcEEEEE-ccCCCCCCCEE
Confidence 2 11 11 1122221 677888887652 1233444321111111 1111 111222
Q ss_pred eEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceecc-CCCC--CccccccceeeecCCCcEEEecCCCc
Q 044265 306 MVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMT-LNPG--TIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 306 ~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~-~~~~--~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
++. .+++.+++|+.+ | .+.+||..+. +... +... ......-.....-+||.++++|+.+.
T Consensus 367 ~~~-~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 367 CLQ-FNKNFVITSSDD-G------------TVKLWDLKTG---EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp EEE-ECSSEEEEEETT-S------------EEEEEETTTC---CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred EEE-ECCCEEEEEeCC-C------------eEEEEECCCC---ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 234 488999998765 3 3689998877 4321 1000 00011111123468999999998764
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.0034 Score=63.06 Aligned_cols=151 Identities=10% Similarity=0.020 Sum_probs=81.6
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQ 105 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 105 (517)
++..++|+.++.++.+ | .+.+||........+ ..+........+.++++.++
T Consensus 114 ~~~s~~~~~l~~~~~d----------g-----------------~i~i~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~ 165 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVEN----------G-----------------ELRLWNKTGALLNVL-NFHRAPIVSVKWNKDGTHII 165 (425)
T ss_dssp EEECTTSSEEEEEETT----------S-----------------CEEEEETTSCEEEEE-CCCCSCEEEEEECTTSSEEE
T ss_pred EEEcCCCCEEEEEeCC----------C-----------------eEEEEeCCCCeeeec-cCCCccEEEEEECCCCCEEE
Confidence 3455788888877643 2 367888433333333 23344444556678999999
Q ss_pred ecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc--------------CccceeEEcCCCcEEEEcCCCCCceEEe-C
Q 044265 106 TGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG--------------RWYGTDQILPDGSVIILGGKGANTVEYY-P 170 (517)
Q Consensus 106 ~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~--------------R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P 170 (517)
+|+.+ ..+.+||.. +.+.... -..... ....+++..++++ +++|+.+ ..+.+| .
T Consensus 166 ~~~~d---~~i~iwd~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-g~i~~~d~ 234 (425)
T 1r5m_A 166 SMDVE---NVTILWNVI----SGTVMQH--FELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK-GAIFVYQI 234 (425)
T ss_dssp EEETT---CCEEEEETT----TTEEEEE--ECCC---------------CCCBSCCEEEETTE-EEEECGG-GCEEEEET
T ss_pred EEecC---CeEEEEECC----CCcEEEE--eeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC-CeEEEEEc
Confidence 88864 578899987 3332221 011111 1133455555654 5666654 356677 4
Q ss_pred CCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEE
Q 044265 171 PRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 171 ~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
...... .... . ...-..+...+++++++.++ ..+.+||..+.+..
T Consensus 235 ~~~~~~~~~~~---~-----~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 235 TEKTPTGKLIG---H-----HGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ 282 (425)
T ss_dssp TCSSCSEEECC---C-----SSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCS
T ss_pred CCCceeeeecc---C-----CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 432211 1100 0 00111244567898888876 45889998876543
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.016 Score=58.11 Aligned_cols=142 Identities=10% Similarity=0.053 Sum_probs=73.8
Q ss_pred eEEEEECCC----CCeEEccccCCCcccceeecCC-CcEEEecCCCCCCCeEEEecCCCCCCCC-----ceEeccCcccc
Q 044265 70 HSAILDLQT----NQIRPLMILTDTWCSSGQILAD-GTVLQTGGDLDGYKKIRKFSPCEANGLC-----DWVELDDVELV 139 (517)
Q Consensus 70 ~~~~yDp~t----~~w~~l~~~~~~~c~~~~~l~d-G~l~v~GG~~~g~~~v~~ydp~~~~~t~-----~W~~~~~~~m~ 139 (517)
.+.+||..+ .+-......+........+.++ ++++++|+.+ ..+++||.... .. ..... .....
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~--~~~~~~~~~~~~-~~~~~ 163 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN---GEIFIWDMNKC--TESPSNYTPLTP-GQSMS 163 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS---SCEEBCBTTTT--SSCTTTCCCBCC-CCSCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC---CeEEEEECCCC--cccccccccccc-ccccC
Confidence 477888877 2222222233334444566777 8899999864 57999998732 10 11111 00111
Q ss_pred CcCccceeEEcCC-CcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCC-cEEEEECC-----
Q 044265 140 NGRWYGTDQILPD-GSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNG-HLFIFAND----- 210 (517)
Q Consensus 140 ~~R~~~s~~~L~d-G~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G-~iyv~Gg~----- 210 (517)
....-.+++..++ +++++.|+.+ ..+.+| ..+.+.. ......... ........+...++| ++++.++.
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSS-NFASIWDLKAKKEVIHLSYTSPNS--GIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSS-SCEEEEETTTTEEEEEECCCCCSS--CCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCC-CCEEEEECCCCCcceEEecccccc--ccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 2233445667777 7888888765 457777 4433221 111000000 000111134455776 57777652
Q ss_pred ceEEEeCCCC
Q 044265 211 KAVMYDYETN 220 (517)
Q Consensus 211 ~~~~ydp~t~ 220 (517)
.+.+||..+.
T Consensus 241 ~i~~~d~~~~ 250 (416)
T 2pm9_A 241 SILIWDLRNA 250 (416)
T ss_dssp CCCEEETTST
T ss_pred eEEEEeCCCC
Confidence 6889999875
No 65
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.62 E-value=0.002 Score=64.18 Aligned_cols=190 Identities=13% Similarity=0.132 Sum_probs=104.7
Q ss_pred cccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc--CcCccceeEEcCCCcEEEEcCCCCCceEE
Q 044265 91 WCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV--NGRWYGTDQILPDGSVIILGGKGANTVEY 168 (517)
Q Consensus 91 ~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~--~~R~~~s~~~L~dG~v~vvGG~~~~~~E~ 168 (517)
.|...++.+||+++++||.+ ..+++||.. +.+|... ..+. ....-.+++.-+||+.++.|+.+ .++.+
T Consensus 18 ~v~~l~~sp~g~~las~~~D---~~i~iw~~~----~~~~~~~--~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-~~v~i 87 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGD---RRIRIWGTE----GDSWICK--SVLSEGHQRTVRKVAWSPCGNYLASASFD-ATTCI 87 (345)
T ss_dssp CEEEEEECTTSSCEEEEETT---SCEEEEEEE----TTEEEEE--EEECSSCSSCEEEEEECTTSSEEEEEETT-SCEEE
T ss_pred cEEEEEECCCCCEEEEEcCC---CeEEEEEcC----CCcceee--eeeccccCCcEEEEEECCCCCEEEEEECC-CcEEE
Confidence 45566778899999999875 689999987 6666533 2222 23344556677899999988866 45667
Q ss_pred e-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeee
Q 044265 169 Y-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAML 245 (517)
Q Consensus 169 y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l 245 (517)
| ...........+.. +. ..-..+...++|++++.|+. .+.+||..+..-...+..+....... -.....
T Consensus 88 w~~~~~~~~~~~~~~~----h~-~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v---~~~~~~ 159 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEG----HE-NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV---KHVVWH 159 (345)
T ss_dssp EEECCC-EEEEEEECC----CS-SCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE---EEEEEC
T ss_pred EEccCCCeEEEEEccC----CC-CCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe---EEEEEC
Confidence 7 44333321111111 00 01113455679999998874 68899987653211111111110000 011222
Q ss_pred ecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CC--CcceeeeeeEEecCCcEEEEcCcc
Q 044265 246 ALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DM--PFGRIMGDMVMLPTGDVLIINGAQ 321 (517)
Q Consensus 246 ~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m--~~~R~~~~~v~lpdG~v~v~GG~~ 321 (517)
| +++++++|+.+. .+..+|.. ...|... .+ ....... ...-|||+.++.|+.+
T Consensus 160 p------~~~~l~s~s~d~--------------~i~~w~~~--~~~~~~~~~~~~h~~~v~~-l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 160 P------SQELLASASYDD--------------TVKLYREE--EDDWVCCATLEGHESTVWS-LAFDPSGQRLASCSDD 215 (345)
T ss_dssp S------SSSCEEEEETTS--------------CEEEEEEE--TTEEEEEEEECCCSSCEEE-EEECTTSSEEEEEETT
T ss_pred C------CCCEEEEEeCCC--------------cEEEEEec--CCCEEEEEEecCCCCceEE-EEECCCCCEEEEEeCC
Confidence 2 678888887652 12344544 2444422 22 1222322 2445899999998865
No 66
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.018 Score=55.15 Aligned_cols=129 Identities=11% Similarity=0.087 Sum_probs=69.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++.......+........+.++++++++|+.+ ..+.+||... ....... ..+......-....
T Consensus 40 ~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~---~~~~~~~--~~~~~~~~~i~~~~ 111 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFA---TSGEDPL--YTLIGHQGNVCSLS 111 (313)
T ss_dssp EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTC---CTTSCC---CEECCCSSCEEEEE
T ss_pred cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeee---cCCCCcc--cchhhcccCEEEEE
Confidence 47789988776555444455555566778899999999874 5677787652 1112212 22322222223333
Q ss_pred cCCCcEEEEcCCCCCceEEeC-CCCCceeccchhhccccccCCCCceEEEcc-CCcEEEEEC--CceEEEeC
Q 044265 150 LPDGSVIILGGKGANTVEYYP-PRNGAVSFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFAN--DKAVMYDY 217 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~yP-~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~Gg--~~~~~ydp 217 (517)
. +++.++.|+.+ ..+.+|- ...... +.. ...... .+...+ +++.++.++ ..+.+||.
T Consensus 112 ~-~~~~l~~~~~d-~~i~~~d~~~~~~~----~~~----~~~~v~-~~~~~~~~~~~l~~~~~d~~i~i~d~ 172 (313)
T 3odt_A 112 F-QDGVVISGSWD-KTAKVWKEGSLVYN----LQA----HNASVW-DAKVVSFSENKFLTASADKTIKLWQN 172 (313)
T ss_dssp E-ETTEEEEEETT-SEEEEEETTEEEEE----EEC----CSSCEE-EEEEEETTTTEEEEEETTSCEEEEET
T ss_pred e-cCCEEEEEeCC-CCEEEEcCCcEEEe----ccc----CCCcee-EEEEccCCCCEEEEEECCCCEEEEec
Confidence 4 77888888765 3455552 110000 000 000111 123334 788888776 35788983
No 67
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.60 E-value=0.052 Score=51.54 Aligned_cols=152 Identities=14% Similarity=0.115 Sum_probs=85.7
Q ss_pred eeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCC-CcccceeecCCC
Q 044265 23 SMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTD-TWCSSGQILADG 101 (517)
Q Consensus 23 ~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG 101 (517)
...+++-++|++|+....+ + .+..||+. +++........ ....+.++..+|
T Consensus 22 p~~i~~d~~g~l~v~~~~~----------~-----------------~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g 73 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKA----------N-----------------KISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG 73 (300)
T ss_dssp EEEEEECTTSCEEEEETTT----------T-----------------EEEEECTT-SCEEEEECSSTTCCEEEEEECTTS
T ss_pred cceeeECCCCCEEEEcCCC----------C-----------------eEEEECCC-CceEEEECCCCCCcceeEEECCCC
Confidence 3445566789999875321 1 36678888 77765443221 223344456789
Q ss_pred cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceecc
Q 044265 102 TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFP 179 (517)
Q Consensus 102 ~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~ 179 (517)
++|+.... ...+.+||+. .++... .++ ....-.+++..++|++|+....+ ..+..| +. .+.....
T Consensus 74 ~l~v~~~~---~~~v~~~d~~-----g~~~~~---~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~-g~~~~~~ 140 (300)
T 2qc5_A 74 DIWFTENG---ANKIGKLSKK-----GGFTEY---PLPQPDSGPYGITEGLNGDIWFTQLNG-DRIGKLTAD-GTIYEYD 140 (300)
T ss_dssp CEEEEETT---TTEEEEECTT-----SCEEEE---ECSSTTCCEEEEEECSTTCEEEEETTT-TEEEEECTT-SCEEEEE
T ss_pred CEEEEecC---CCeEEEECCC-----CCeEEe---cCCCCCCCCccceECCCCCEEEEccCC-CeEEEECCC-CCEEEcc
Confidence 99997643 2578899986 234333 121 11223455666789999875422 345556 54 3332211
Q ss_pred chhhccccccCCCCce-EEEccCCcEEEEE--CCceEEEeCCCCeEE
Q 044265 180 FLADVEDKQMDNLYPY-VHLLPNGHLFIFA--NDKAVMYDYETNKIA 223 (517)
Q Consensus 180 ~l~~t~~~~~~~~yp~-~~~~~~G~iyv~G--g~~~~~ydp~t~~w~ 223 (517)
. .. ....|. ..+-++|+||+.. +..+.+||+ +++..
T Consensus 141 ~-~~------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 141 L-PN------KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp C-SS------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred C-CC------CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 1 10 011233 3344789999886 456889999 56655
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.018 Score=57.81 Aligned_cols=261 Identities=10% Similarity=0.067 Sum_probs=131.8
Q ss_pred eEEEEECCCCCeE-Eccc-cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccce
Q 044265 70 HSAILDLQTNQIR-PLMI-LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~-~l~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s 146 (517)
.+.+||..+++-. .+.. .+.......++.++|+++++|+.+ ..+++||.... ....... ..+. ....-.+
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~vw~~~~~--~~~~~~~--~~~~~h~~~v~~ 118 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN---GSLELYSTNEA--NNAINSM--ARFSNHSSSVKT 118 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS---SCEEEECCSST--TSCCCEE--EECCCSSSCCCE
T ss_pred eEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC---CeEEEeecccc--cccccch--hhccCCccceEE
Confidence 4789998876532 2211 223333345567899999998864 57999998721 0111111 1222 2223345
Q ss_pred eEEcCC-CcEEEEcCCCCCceEEe-CCCCC------c-eeccchhhccccccCCCCceEEEccC-CcEEEEECC--ceEE
Q 044265 147 DQILPD-GSVIILGGKGANTVEYY-PPRNG------A-VSFPFLADVEDKQMDNLYPYVHLLPN-GHLFIFAND--KAVM 214 (517)
Q Consensus 147 ~~~L~d-G~v~vvGG~~~~~~E~y-P~~~~------w-~~~~~l~~t~~~~~~~~yp~~~~~~~-G~iyv~Gg~--~~~~ 214 (517)
++..++ +++++.|+.+ ..+.+| ..+.. . .....+.. ... .-..+...++ +++++.|+. .+.+
T Consensus 119 ~~~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~----~~~-~v~~~~~~~~~~~~l~~~~~dg~v~i 192 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNN-GEIFIWDMNKCTESPSNYTPLTPGQSMS----SVD-EVISLAWNQSLAHVFASAGSSNFASI 192 (416)
T ss_dssp EEECSSSTTBEEEECSS-SCEEBCBTTTTSSCTTTCCCBCCCCSCC----SSC-CCCEEEECSSCTTEEEEESSSSCEEE
T ss_pred EEEcCCCCCEEEEEcCC-CeEEEEECCCCccccccccccccccccC----CCC-CeeEEEeCCCCCcEEEEEcCCCCEEE
Confidence 566676 8888888865 456777 43322 1 11100000 001 1123555677 788888864 5889
Q ss_pred EeCCCCeEEEecCCCCCCCC--CCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCc
Q 044265 215 YDYETNKIAREYPPLDGGPR--NYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTW 292 (517)
Q Consensus 215 ydp~t~~w~~~~p~~p~~~r--~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W 292 (517)
||..+++....+.. ..... ..+. ......| .+.+++++|+.+.. ...+..+|+... .-
T Consensus 193 wd~~~~~~~~~~~~-~~~~~~~~~~v-~~~~~~~-----~~~~~l~~~~~d~~-----------~~~i~~~d~~~~--~~ 252 (416)
T 2pm9_A 193 WDLKAKKEVIHLSY-TSPNSGIKQQL-SVVEWHP-----KNSTRVATATGSDN-----------DPSILIWDLRNA--NT 252 (416)
T ss_dssp EETTTTEEEEEECC-CCCSSCCCCCE-EEEEECS-----SCTTEEEEEECCSS-----------SCCCCEEETTST--TS
T ss_pred EECCCCCcceEEec-cccccccCCce-EEEEECC-----CCCCEEEEEECCCC-----------CceEEEEeCCCC--CC
Confidence 99999876644421 10000 1000 1112222 12357777776521 112345565421 10
Q ss_pred eecCCC--cceeeeeeEEec-CCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceec-cCCCCCccccccceeee
Q 044265 293 EMEDMP--FGRIMGDMVMLP-TGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFM-TLNPGTIPRMYHSTANL 368 (517)
Q Consensus 293 ~~~~m~--~~R~~~~~v~lp-dG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~~~~~R~yhs~a~l 368 (517)
....+. ....-.+....| +++++++|+.+ | .+.+||..+. +-. .+... .... .....
T Consensus 253 ~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g------------~v~~wd~~~~---~~~~~~~~~-~~~v--~~~~~ 313 (416)
T 2pm9_A 253 PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-N------------TVLLWNPESA---EQLSQFPAR-GNWC--FKTKF 313 (416)
T ss_dssp CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-S------------EEEEECSSSC---CEEEEEECS-SSCC--CCEEE
T ss_pred CcEEeecCccCceeEEEeCCCCCCeEEEEeCC-C------------CEEEeeCCCC---ccceeecCC-CCce--EEEEE
Confidence 011222 111112223346 89999998765 2 3688998776 321 11111 1111 12445
Q ss_pred cCCC-cEEEecCCCc
Q 044265 369 LPDG-RVLIAGSNPH 382 (517)
Q Consensus 369 l~dG-~V~v~GG~~~ 382 (517)
.||| +++++|+.+.
T Consensus 314 s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 314 APEAPDLFACASFDN 328 (416)
T ss_dssp CTTCTTEEEECCSSS
T ss_pred CCCCCCEEEEEecCC
Confidence 6898 8999998653
No 69
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.60 E-value=0.0096 Score=62.98 Aligned_cols=243 Identities=12% Similarity=0.121 Sum_probs=123.8
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||........+. .+.....+.++.+|++.+++|+.+ ..+++||.. ...-... . .....-.+++.
T Consensus 285 ~i~~w~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~----~~~~~~~--~--~~~~~v~~~~~ 352 (577)
T 2ymu_A 285 TVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDGQTIASASDD---KTVKLWNRN----GQHLQTL--T--GHSSSVWGVAF 352 (577)
T ss_dssp CEEEEETTSCEEEEEC-CCSSCEEEEEECTTSSEEEEEETT---SCEEEEETT----SCEEEEE--C--CCSSCEEEEEE
T ss_pred EEEEEeCCCcEEEEEe-cCCCCeEEEEECCCCCEEEEEeCC---CeEEEEeCC----CCeeEEE--e--CCCCCEEEEEE
Confidence 4677886544433332 233333345667899999998864 578999976 3332222 1 11122235667
Q ss_pred cCCCcEEEEcCCCCCceEEeCCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCeEEEecC
Q 044265 150 LPDGSVIILGGKGANTVEYYPPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNKIAREYP 227 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~yP~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~w~~~~p 227 (517)
.+||+.++.|+.+ ..+.+|..+..-.. .+.. +. ..-..+...+||+.++.|+. .+.+||..... ...+.
T Consensus 353 s~~g~~l~~~~~d-g~v~~~~~~~~~~~--~~~~----~~-~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~-~~~~~ 423 (577)
T 2ymu_A 353 SPDGQTIASASDD-KTVKLWNRNGQLLQ--TLTG----HS-SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL-LQTLT 423 (577)
T ss_dssp CTTSSEEEEEETT-SEEEEEETTCCEEE--EEEC----CS-SCEEEEEECTTSSCEEEEETTSEEEEECTTCCE-EEEEE
T ss_pred CCCCCEEEEEeCC-CEEEEEcCCCCEEE--EecC----CC-CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCE-EEEec
Confidence 7899998888754 45667732221110 0100 00 00113455689998888864 57889864433 32331
Q ss_pred CCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeeeE
Q 044265 228 PLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDMV 307 (517)
Q Consensus 228 ~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~v 307 (517)
+.... -.++.+. .+++.+++++.+. . +..+|.. ...-....-...... +..
T Consensus 424 ---~~~~~----v~~~~~s-----~d~~~l~~~~~d~-~-------------v~~w~~~--~~~~~~~~~~~~~v~-~~~ 474 (577)
T 2ymu_A 424 ---GHSSS----VWGVAFS-----PDDQTIASASDDK-T-------------VKLWNRN--GQLLQTLTGHSSSVR-GVA 474 (577)
T ss_dssp ---CCSSC----EEEEEEC-----TTSSEEEEEETTS-E-------------EEEEETT--SCEEEEEECCSSCEE-EEE
T ss_pred ---CCCCC----eEEEEEC-----CCCCEEEEEcCCC-E-------------EEEEECC--CCEEEEEcCCCCCEE-EEE
Confidence 11000 0122222 1677888877652 1 2223322 111111111112222 234
Q ss_pred EecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 308 MLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 308 ~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
.-|||+++++++.+ + .+.+||.... .-..+... .... ......|||+.+++|+.+
T Consensus 475 ~spd~~~las~~~d-~------------~i~iw~~~~~---~~~~~~~h-~~~v--~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 475 FSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGH-SSSV--RGVAFSPDGQTIASASDD 529 (577)
T ss_dssp ECTTSCEEEEEETT-S------------EEEEEETTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEETT
T ss_pred EcCCCCEEEEEeCC-C------------EEEEEcCCCC---EEEEEeCC-CCCE--EEEEEcCCCCEEEEEECc
Confidence 56899999998765 2 3688985433 32222111 1111 123457999999999864
No 70
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.59 E-value=0.0015 Score=65.09 Aligned_cols=136 Identities=10% Similarity=0.041 Sum_probs=76.4
Q ss_pred EEEEECCCCCeEEcccc--CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCc-eEeccCcccc-CcCccce
Q 044265 71 SAILDLQTNQIRPLMIL--TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCD-WVELDDVELV-NGRWYGT 146 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~-W~~~~~~~m~-~~R~~~s 146 (517)
+.+||..++.|..+... +........+.++|+++++|+.+ ..+++||.. +.. |... ..+. ....-.+
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~----~~~~~~~~--~~~~~~~~~v~~ 105 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKR----PDGTWKQT--LVLLRLNRAATF 105 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC----------CCCCE--EECCCCSSCEEE
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcC----CCCceeee--eEecccCCceEE
Confidence 56899888877766543 33344455677899999999864 579999987 333 4433 2222 2333445
Q ss_pred eEEcCCCcEEEEcCCCCCceEEe-CCCC-CceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCC
Q 044265 147 DQILPDGSVIILGGKGANTVEYY-PPRN-GAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETN 220 (517)
Q Consensus 147 ~~~L~dG~v~vvGG~~~~~~E~y-P~~~-~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~ 220 (517)
++..+||+.++.|+.+ ..+.+| .... .|.....+.... ...-..+...++|++++.|+. .+.+||..+.
T Consensus 106 ~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGA-RVISVCYFEQENDWWVSKHLKRPL----RSTILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp EECCTTSSCCEEEESS-SCEEECCC-----CCCCEEECSSC----CSCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred EEECCCCCEEEEEecC-CeEEEEEECCcccceeeeEeeccc----CCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 5666789998888865 456777 3332 232111111100 011113455679998888864 5888998643
No 71
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.57 E-value=0.0067 Score=61.96 Aligned_cols=133 Identities=8% Similarity=0.073 Sum_probs=77.5
Q ss_pred eEEEEECCCCCeEEcccc--CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMIL--TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||..|++...+-.. +.....+.++.+||+.+++|+.+ ..+++||.. +.+-.. .+........+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~----~~~~~~----~~~~h~~~v~~ 194 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ----QQKRLR----NMTSHSARVGS 194 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT----TTEEEE----EECCCSSCEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC----CCcEEE----EEeCCCCceEE
Confidence 589999999988765443 33334456678899999999875 679999987 443222 22222222222
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCe
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNK 221 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~ 221 (517)
.. .++++++.|+.+. .+.++ .......... +... ..........++|+.++.++. .+.+||..+++
T Consensus 195 ~s-~~~~~l~sgs~d~-~i~~~d~~~~~~~~~~-~~~h-----~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 195 LS-WNSYILSSGSRSG-HIHHHDVRVAEHHVAT-LSGH-----SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EE-EETTEEEEEETTS-EEEEEETTSSSCEEEE-EECC-----SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred Ee-eCCCEEEEEeCCC-ceeEeeecccceeeEE-eccc-----ccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 33 3888988887653 44444 2222111110 1100 001113445678888888864 57788887653
No 72
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.0037 Score=61.79 Aligned_cols=241 Identities=16% Similarity=0.100 Sum_probs=122.2
Q ss_pred cceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC-ccceeEEcCC--CcEEEEcCCCCCceEEe
Q 044265 93 SSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR-WYGTDQILPD--GSVIILGGKGANTVEYY 169 (517)
Q Consensus 93 ~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R-~~~s~~~L~d--G~v~vvGG~~~~~~E~y 169 (517)
.+.++.+||+++++|+.+ ..+++||.. ..++... ..+.... .-.+++..++ ++.++.|+.+ ..+.+|
T Consensus 15 ~~~~~s~~~~~l~~~~~d---g~i~iw~~~----~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-g~v~iw 84 (379)
T 3jrp_A 15 HDAVLDYYGKRLATCSSD---KTIKIFEVE----GETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYD-GKVLIW 84 (379)
T ss_dssp EEEEECSSSSEEEEEETT---SCEEEEEEE----TTEEEEE--EEECCCSSCEEEEEECCGGGCSEEEEEETT-SCEEEE
T ss_pred EEEEEcCCCCEEEEEECC---CcEEEEecC----CCcceee--eEecCCCCcEEEEEeCCCCCCCEEEEeccC-CEEEEE
Confidence 344566899999999864 578999986 4555544 3343222 2233444445 8888888876 457777
Q ss_pred -CCCCCceeccchhhccccccCCCCceEEEccC--CcEEEEECC--ceEEEeCCCCeEEEecCCCCCCCCCCCCCCcee-
Q 044265 170 -PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPN--GHLFIFAND--KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSA- 243 (517)
Q Consensus 170 -P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~--G~iyv~Gg~--~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v- 243 (517)
..+.++.....+... . ..-..+...++ |+++++|+. .+.+||..++...... .+... . .+ -.++
T Consensus 85 d~~~~~~~~~~~~~~~----~-~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~-~-~~--v~~~~ 154 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVH----S-ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDAH-A-IG--VNSAS 154 (379)
T ss_dssp EEETTEEEEEEEECCC----S-SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE-EEECC-T-TC--EEEEE
T ss_pred EcCCCceeEeeeecCC----C-cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE-EecCC-C-Cc--eEEEE
Confidence 444443321111100 0 01112445566 888888864 5788998776321100 00100 0 00 0111
Q ss_pred eeecc-------cCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCC--cceeeeeeEEecC--
Q 044265 244 MLALE-------GDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMP--FGRIMGDMVMLPT-- 311 (517)
Q Consensus 244 ~l~~~-------~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~--~~R~~~~~v~lpd-- 311 (517)
..|.. ....+++.+++|+.+. .+..+|+......|... .+. ..... +...-|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~~~ 219 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGADN--------------LVKIWKYNSDAQTYVLESTLEGHSDWVR-DVAWSPTVL 219 (379)
T ss_dssp ECCCC----------CTTCEEEEEETTS--------------CEEEEEEETTTTEEEEEEEECCCSSCEE-EEEECCCCS
T ss_pred EcCccccccccccCCCCCCEEEEEeCCC--------------eEEEEEecCCCcceeeEEEEecccCcEe-EEEECCCCC
Confidence 11100 0000477888887652 23456665333344433 222 22222 2245578
Q ss_pred -CcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCc-eeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 312 -GDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGL-RFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 312 -G~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~-~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
++++++|+.+ | .+.+||..+.... ............. -......+||+.+++|+.+.
T Consensus 220 ~~~~l~s~~~d-g------------~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~~~~dg 278 (379)
T 3jrp_A 220 LRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDV-LWRASWSLSGNVLALSGGDN 278 (379)
T ss_dssp SSEEEEEEETT-S------------CEEEEEESSTTSCCEEEESSSSCCSSC-EEEEEECSSSCCEEEEESSS
T ss_pred CCCeEEEEeCC-C------------EEEEEeCCCCCccceeeeeccccCCCc-EEEEEEcCCCCEEEEecCCC
Confidence 8999998765 2 3688988775211 0111111111111 11234579999999988653
No 73
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.56 E-value=0.013 Score=68.38 Aligned_cols=269 Identities=9% Similarity=0.047 Sum_probs=142.4
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQ 105 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 105 (517)
.+.-++|+.++.++.+ | .+.+||..+++....-..+.....+.++.+||++++
T Consensus 621 ~~~s~~~~~l~s~~~d----------~-----------------~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 673 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGAD----------K-----------------TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673 (1249)
T ss_dssp EEECTTSSEEEEEETT----------S-----------------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEECCCCCEEEEEeCC----------C-----------------eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEE
Confidence 4555788888877632 2 478999998876543344555455567788999999
Q ss_pred ecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcC--CCcEEEEcCCCCCceEEe-CCCCCceeccch
Q 044265 106 TGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILP--DGSVIILGGKGANTVEYY-PPRNGAVSFPFL 181 (517)
Q Consensus 106 ~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~--dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l 181 (517)
+|+.+ ..+.+||.. +.+.... +. ......+++..+ ++.+++.|+.+ ..+.+| ..+..... . +
T Consensus 674 s~~~d---~~v~vwd~~----~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~sg~~d-~~v~vwd~~~~~~~~-~-~ 739 (1249)
T 3sfz_A 674 TCSAD---KKVKIWDSA----TGKLVHT----YDEHSEQVNCCHFTNKSNHLLLATGSND-FFLKLWDLNQKECRN-T-M 739 (1249)
T ss_dssp EEETT---SEEEEEETT----TCCEEEE----EECCSSCEEEEEECSSSSCCEEEEEETT-SCEEEEETTSSSEEE-E-E
T ss_pred EEeCC---CeEEEEECC----CCceEEE----EcCCCCcEEEEEEecCCCceEEEEEeCC-CeEEEEECCCcchhh-e-e
Confidence 99864 679999987 4433221 22 222333445555 44566666544 567777 44433221 0 1
Q ss_pred hhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCeEEEecCCCC--CC----CCCCCCC-CceeeeecccCcc
Q 044265 182 ADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNKIAREYPPLD--GG----PRNYPSA-GSSAMLALEGDFA 252 (517)
Q Consensus 182 ~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~w~~~~p~~p--~~----~r~~~~~-g~~v~l~~~~~~~ 252 (517)
... ...-..+...++|+.++.|+. .+.+||..+.+....+.... .. ....... .+....|
T Consensus 740 ~~h-----~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------ 808 (1249)
T 3sfz_A 740 FGH-----TNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA------ 808 (1249)
T ss_dssp CCC-----SSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT------
T ss_pred cCC-----CCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC------
Confidence 000 011113456689998888864 68899998876543321100 00 0000000 0111222
Q ss_pred ccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec--CCCcceeeeeeEEecCCcEEEEcCccCCCCCcccC
Q 044265 253 TAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME--DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMA 330 (517)
Q Consensus 253 ~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~--~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~ 330 (517)
+++.+++++.. . +..+|+.. ...... .-...... .....++|+++++|+.+ |
T Consensus 809 dg~~l~~~~~~--~-------------v~~~d~~~--~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~d-g------- 862 (1249)
T 3sfz_A 809 DGDKIIVAAKN--K-------------VLLFDIHT--SGLLAEIHTGHHSTIQ-YCDFSPYDHLAVIALSQ-Y------- 862 (1249)
T ss_dssp TSSEEEEEETT--E-------------EEEEETTT--CCEEEEEECSSSSCCC-EEEECSSTTEEEEECSS-S-------
T ss_pred CCCEEEEEcCC--c-------------EEEEEecC--CCceeEEcCCCCCceE-EEEEcCCCCEEEEEeCC-C-------
Confidence 66766666532 1 22344331 111111 11122222 22456899999998765 2
Q ss_pred CCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 331 SNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 331 ~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
.+.+||..+. +-...-..+... -......+||+.+++|+.+.
T Consensus 863 -----~v~vwd~~~~---~~~~~~~~h~~~--v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 863 -----CVELWNIDSR---LKVADCRGHLSW--VHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp -----CEEEEETTTT---EEEEEECCCSSC--EEEEEECTTSSEEEEEETTS
T ss_pred -----eEEEEEcCCC---ceeeecCCCccc--eEEEEECCCCCEEEEEeCCC
Confidence 3688998876 322111111111 11244578999999998764
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.56 E-value=0.013 Score=60.05 Aligned_cols=135 Identities=10% Similarity=0.076 Sum_probs=75.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++....-..+..... .+..+++++++|+.+ ..+++||.. +.+-.. .+......-....
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~~~v~--~l~~~~~~l~sg~~d---g~i~vwd~~----~~~~~~----~~~~h~~~v~~l~ 220 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHTGSVL--CLQYDERVIITGSSD---STVRVWDVN----TGEMLN----TLIHHCEAVLHLR 220 (435)
T ss_dssp CEEEEESSSCCEEEEECCCSSCEE--EEECCSSEEEEEETT---SCEEEEESS----SCCEEE----EECCCCSCEEEEE
T ss_pred eEEEEeCCCCeEEEEEcCCCCcEE--EEEECCCEEEEEcCC---CeEEEEECC----CCcEEE----EEcCCCCcEEEEE
Confidence 477899988776544333333221 223489999999874 579999987 443322 2322222223334
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEe
Q 044265 150 LPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIARE 225 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~ 225 (517)
. ++..++.|+.+ ..+.+| ..+.... ....+.. ...+...+..+++.++.|+ ..+.+||..+++-...
T Consensus 221 ~-~~~~l~s~s~d-g~i~vwd~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 221 F-NNGMMVTCSKD-RSIAVWDMASPTDITLRRVLVG-------HRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp C-CTTEEEEEETT-SCEEEEECSSSSCCEEEEEECC-------CSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred E-cCCEEEEeeCC-CcEEEEeCCCCCCceeeeEecC-------CCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 4 56677777765 467777 4332211 1011110 1112233445888888876 4688999998876544
Q ss_pred c
Q 044265 226 Y 226 (517)
Q Consensus 226 ~ 226 (517)
+
T Consensus 292 ~ 292 (435)
T 1p22_A 292 L 292 (435)
T ss_dssp E
T ss_pred E
Confidence 3
No 75
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.54 E-value=0.018 Score=55.88 Aligned_cols=137 Identities=7% Similarity=-0.001 Sum_probs=70.5
Q ss_pred eEEEEECC--CCCeEEccccC-CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 70 HSAILDLQ--TNQIRPLMILT-DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~--t~~w~~l~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
.+.+||.. +++++.+.... .......++.+||+.+++++..+ ..+.+||... ....... ..+.....-..
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~~---~~~~~~~--~~~~~~~~~~~ 133 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLED---GLPVGVV--DVVEGLDGCHS 133 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEET---TEEEEEE--EEECCCTTBCC
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--CeEEEEECCC---Ccccccc--ccccCCCCceE
Confidence 46677765 77877654321 11233455678998665555432 5788998741 1122222 12222223445
Q ss_pred eEEcCCCcEEEEcCCCCCceEEe-CCC-CCceecc--chhhccccccCCCCc-eEEEccCCc-EEEEEC--CceEEEeCC
Q 044265 147 DQILPDGSVIILGGKGANTVEYY-PPR-NGAVSFP--FLADVEDKQMDNLYP-YVHLLPNGH-LFIFAN--DKAVMYDYE 218 (517)
Q Consensus 147 ~~~L~dG~v~vvGG~~~~~~E~y-P~~-~~w~~~~--~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~Gg--~~~~~ydp~ 218 (517)
++.-+||+.+++++.....+.+| ..+ .+..... .... .....+ .+...++|+ +|+.+. ..+.+||..
T Consensus 134 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 134 ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT-----VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC-----STTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred EEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc-----CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 66778887545544333457777 443 3332111 0000 001122 245568887 666653 468889984
No 76
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.54 E-value=0.022 Score=56.23 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=54.5
Q ss_pred eEEEEECCCCCe-----EEcc--ccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-Cc
Q 044265 70 HSAILDLQTNQI-----RPLM--ILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NG 141 (517)
Q Consensus 70 ~~~~yDp~t~~w-----~~l~--~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~ 141 (517)
.+.+||..+++- .+.. ..+.......++.+++.++++|+.+ ..+++||.. +.+... .+. ..
T Consensus 50 ~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D---~~v~lwd~~----~~~~~~----~~~~h~ 118 (343)
T 2xzm_R 50 TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD---KTLRLWDLR----TGTTYK----RFVGHQ 118 (343)
T ss_dssp CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT---SEEEEEETT----SSCEEE----EEECCC
T ss_pred EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC---CcEEEEECC----CCcEEE----EEcCCC
Confidence 467888765431 1111 2344444445667899999999875 689999987 443322 122 22
Q ss_pred CccceeEEcCCCcEEEEcCCCCCceEEe
Q 044265 142 RWYGTDQILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 142 R~~~s~~~L~dG~v~vvGG~~~~~~E~y 169 (517)
..-.+++..+||+.++.||.+ .++.+|
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d-~~i~~w 145 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAE-REIKLW 145 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETT-SCEEEE
T ss_pred CcEEEEEECCCCCEEEEEcCC-CEEEEE
Confidence 234456777899998888865 456666
No 77
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.0046 Score=61.03 Aligned_cols=247 Identities=11% Similarity=0.148 Sum_probs=132.4
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccc--cCCCcccceeecCC--C
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMI--LTDTWCSSGQILAD--G 101 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~d--G 101 (517)
++.-++|+.++.++.+ | .+.+||...+++..+.. .+........+.++ +
T Consensus 17 ~~~s~~~~~l~~~~~d----------g-----------------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 69 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSD----------K-----------------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG 69 (379)
T ss_dssp EEECSSSSEEEEEETT----------S-----------------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred EEEcCCCCEEEEEECC----------C-----------------cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC
Confidence 3455788888877643 2 36788887666655443 23333333444455 8
Q ss_pred cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCC--CcEEEEcCCCCCceEEe-CCCCC-ce
Q 044265 102 TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPD--GSVIILGGKGANTVEYY-PPRNG-AV 176 (517)
Q Consensus 102 ~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~d--G~v~vvGG~~~~~~E~y-P~~~~-w~ 176 (517)
+++++|+.+ ..+++||.. +.+|... ..+. ....-.+++..++ ++.+++|+.+ ..+.+| ..... ..
T Consensus 70 ~~l~s~~~d---g~v~iwd~~----~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 70 TILASCSYD---GKVLIWKEE----NGRWSQI--AVHAVHSASVNSVQWAPHEYGPLLLVASSD-GKVSVVEFKENGTTS 139 (379)
T ss_dssp SEEEEEETT---SCEEEEEEE----TTEEEEE--EEECCCSSCEEEEEECCGGGCSEEEEEETT-SEEEEEECCTTSCCC
T ss_pred CEEEEeccC---CEEEEEEcC----CCceeEe--eeecCCCcceEEEEeCCCCCCCEEEEecCC-CcEEEEecCCCCcee
Confidence 999999874 579999988 6666554 3333 2233455666777 8898888865 356666 33321 11
Q ss_pred eccchhhccccccCCCCceEEEcc-------------CCcEEEEEC--CceEEEeCCCCe--EEEecCCCCCCCCCCCCC
Q 044265 177 SFPFLADVEDKQMDNLYPYVHLLP-------------NGHLFIFAN--DKAVMYDYETNK--IAREYPPLDGGPRNYPSA 239 (517)
Q Consensus 177 ~~~~l~~t~~~~~~~~yp~~~~~~-------------~G~iyv~Gg--~~~~~ydp~t~~--w~~~~p~~p~~~r~~~~~ 239 (517)
.... ... .. .-..+...+ ++++++.|+ ..+.+||..+++ +.. ...+... ....
T Consensus 140 ~~~~-~~~----~~-~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~h-~~~v-- 209 (379)
T 3jrp_A 140 PIII-DAH----AI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-ESTLEGH-SDWV-- 209 (379)
T ss_dssp EEEE-ECC----TT-CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEE-EEEECCC-SSCE--
T ss_pred eEEe-cCC----CC-ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceee-EEEEecc-cCcE--
Confidence 1100 000 00 001223334 688888886 358899986543 321 1112211 1100
Q ss_pred CceeeeecccCccc---cEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec--CC-CcceeeeeeEEecCCc
Q 044265 240 GSSAMLALEGDFAT---AVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME--DM-PFGRIMGDMVMLPTGD 313 (517)
Q Consensus 240 g~~v~l~~~~~~~~---gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~--~m-~~~R~~~~~v~lpdG~ 313 (517)
-.....| + ++++++|+.+. .+..+|+......+... .. .....-......|||+
T Consensus 210 ~~~~~sp------~~~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 269 (379)
T 3jrp_A 210 RDVAWSP------TVLLRSYLASVSQDR--------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN 269 (379)
T ss_dssp EEEEECC------CCSSSEEEEEEETTS--------------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC
T ss_pred eEEEECC------CCCCCCeEEEEeCCC--------------EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC
Confidence 0112222 4 78899988762 13445655322233322 11 1222222334558999
Q ss_pred EEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCC
Q 044265 314 VLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLN 354 (517)
Q Consensus 314 v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~ 354 (517)
.+++++.+ | .+.+||.... .+|..+.
T Consensus 270 ~l~~~~~d-g------------~i~iw~~~~~--~~~~~~~ 295 (379)
T 3jrp_A 270 VLALSGGD-N------------KVTLWKENLE--GKWEPAG 295 (379)
T ss_dssp CEEEEESS-S------------SEEEEEEEET--TEEEEEE
T ss_pred EEEEecCC-C------------cEEEEeCCCC--Ccccccc
Confidence 99988764 3 3678887743 2776553
No 78
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.53 E-value=0.052 Score=50.98 Aligned_cols=133 Identities=14% Similarity=0.073 Sum_probs=71.0
Q ss_pred EEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEc
Q 044265 71 SAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQIL 150 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L 150 (517)
+..||+.+...............+.++..+|++|+... . ..+.+||+. +...... .......-.+.+.-
T Consensus 48 i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~---~~i~~~d~~----~~~~~~~---~~~~~~~p~~i~~~ 116 (270)
T 1rwi_B 48 VVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-N---NRVVTLAAG----SNNQTVL---PFDGLNYPEGLAVD 116 (270)
T ss_dssp EEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-T---TEEEEECTT----CSCCEEC---CCCSCSSEEEEEEC
T ss_pred EEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-C---CEEEEEeCC----CceEeee---ecCCcCCCcceEEC
Confidence 56788877665544332222233455667899999865 2 578999987 4333332 11111223355666
Q ss_pred CCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCcEEEEEC--CceEEEeCCCCeEE
Q 044265 151 PDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 151 ~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
++|++|+....+ ..+.+| +.+........ . . ...| ...+-++|+||+... ..+.+||+.+....
T Consensus 117 ~~g~l~v~~~~~-~~i~~~~~~~~~~~~~~~---~----~-~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 117 TQGAVYVADRGN-NRVVKLAAGSKTQTVLPF---T----G-LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp TTCCEEEEEGGG-TEEEEECTTCCSCEECCC---C----S-CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCCCEEEEECCC-CEEEEEECCCceeEeecc---c----c-CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 789999875432 345555 33222211110 0 0 0112 245557899998764 57889999887654
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.53 E-value=0.012 Score=57.00 Aligned_cols=249 Identities=9% Similarity=0.124 Sum_probs=125.2
Q ss_pred EEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccc--cCCCcccceeecC--CCc
Q 044265 27 AVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMI--LTDTWCSSGQILA--DGT 102 (517)
Q Consensus 27 ~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~--dG~ 102 (517)
+.-++|+.++.++.+ | .+.+||..+++...+.. .|........+.+ +|+
T Consensus 16 ~~s~~g~~las~s~D----------~-----------------~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~ 68 (297)
T 2pm7_B 16 VMDYYGKRMATCSSD----------K-----------------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT 68 (297)
T ss_dssp EECTTSSEEEEEETT----------S-----------------CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCS
T ss_pred EECCCCCEEEEEeCC----------C-----------------EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCC
Confidence 445789888887643 2 36788887554332222 2332222233333 489
Q ss_pred EEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCC--CcEEEEcCCCCCceEEe-CCCC-Ccee
Q 044265 103 VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPD--GSVIILGGKGANTVEYY-PPRN-GAVS 177 (517)
Q Consensus 103 l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~d--G~v~vvGG~~~~~~E~y-P~~~-~w~~ 177 (517)
++++|+.+ ..+++||.. +.+|... ..+. ....-.+++..++ |++++.|+.+ .++.+| .... .+..
T Consensus 69 ~l~s~s~D---~~v~iWd~~----~~~~~~~--~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 69 ILASCSYD---GKVMIWKEE----NGRWSQI--AVHAVHSASVNSVQWAPHEYGPMLLVASSD-GKVSVVEFKENGTTSP 138 (297)
T ss_dssp EEEEEETT---TEEEEEEBS----SSCBCCC--EEECCCSSCEEEEEECCGGGCSEEEEEETT-SEEEEEEBCSSSCBCC
T ss_pred EEEEEcCC---CEEEEEEcC----CCceEEE--EEeecCCCceeEEEeCcCCCCcEEEEEECC-CcEEEEEecCCCceee
Confidence 99999875 689999988 5566543 2222 1222334555555 7888888765 456677 4332 1210
Q ss_pred ccchhhccccccCCCCceEEEcc-------------CCcEEEEEC--CceEEEeCCCCe--EEEecCCCCCCCCCCCCCC
Q 044265 178 FPFLADVEDKQMDNLYPYVHLLP-------------NGHLFIFAN--DKAVMYDYETNK--IAREYPPLDGGPRNYPSAG 240 (517)
Q Consensus 178 ~~~l~~t~~~~~~~~yp~~~~~~-------------~G~iyv~Gg--~~~~~ydp~t~~--w~~~~p~~p~~~r~~~~~g 240 (517)
. .+.. +... -..+...+ ++++++.|+ ..+.+||..+++ +.. ...+.+. ... -
T Consensus 139 ~-~~~~----h~~~-v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~-~~~l~~H-~~~---V 207 (297)
T 2pm7_B 139 I-IIDA----HAIG-VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-ESTLEGH-SDW---V 207 (297)
T ss_dssp E-EEEC----CSSC-EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE-EEEECCC-SSC---E
T ss_pred e-eeec----ccCc-cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE-EEEecCC-CCc---e
Confidence 0 0000 0000 00112223 357888886 458889987643 321 1122221 110 0
Q ss_pred ceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCC---C-cceeeeeeEEecCCcEEE
Q 044265 241 SSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDM---P-FGRIMGDMVMLPTGDVLI 316 (517)
Q Consensus 241 ~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m---~-~~R~~~~~v~lpdG~v~v 316 (517)
.++.+.. +...+++++.|+.+. ++..+|+......|....+ . ..... ....-|||++++
T Consensus 208 ~~v~~sp--~~~~~~~las~s~D~--------------~v~iWd~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~g~~la 270 (297)
T 2pm7_B 208 RDVAWSP--TVLLRSYMASVSQDR--------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLW-RASWSLSGNVLA 270 (297)
T ss_dssp EEEEECC--CCSSSEEEEEEETTS--------------CEEEEEESSTTSCCEEEESSSSCCSSCEE-EEEECSSSCCEE
T ss_pred EEEEECC--CCCCceEEEEEECCC--------------cEEEEEeCCCCCccceeeeecccCCCcEE-EEEECCCCCEEE
Confidence 1222211 000157888888762 2344555432334543211 1 12222 223458999999
Q ss_pred EcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCC
Q 044265 317 INGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNP 355 (517)
Q Consensus 317 ~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~ 355 (517)
.||.+ + .+.+|+...+ ..|..+..
T Consensus 271 s~~~D-~------------~v~lw~~~~~--g~w~~~~~ 294 (297)
T 2pm7_B 271 LSGGD-N------------KVTLWKENLE--GKWEPAGE 294 (297)
T ss_dssp EEETT-S------------CEEEEEECTT--SCEEEC--
T ss_pred EEcCC-C------------cEEEEEECCC--CcEEeccc
Confidence 98865 2 3678887643 16876543
No 80
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.52 E-value=0.019 Score=56.16 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=54.4
Q ss_pred eEEEEECCCCCeEE--ccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRP--LMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~--l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||..+..... ....+........+.++++.+++|+.+ ..+++||.. +.+.... ......-.++
T Consensus 65 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~----~~~~~~~----~~~~~~v~~~ 133 (368)
T 3mmy_A 65 DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS----SNQAIQI----AQHDAPVKTI 133 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----TTEEEEE----EECSSCEEEE
T ss_pred cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC----CCCceee----ccccCceEEE
Confidence 47789988733322 222344444455677899999999864 689999987 4443332 1122223334
Q ss_pred EE--cCCCcEEEEcCCCCCceEEe
Q 044265 148 QI--LPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 148 ~~--L~dG~v~vvGG~~~~~~E~y 169 (517)
+. .++++.++.|+.+ ..+.+|
T Consensus 134 ~~~~~~~~~~l~~~~~d-g~i~vw 156 (368)
T 3mmy_A 134 HWIKAPNYSCVMTGSWD-KTLKFW 156 (368)
T ss_dssp EEEECSSCEEEEEEETT-SEEEEE
T ss_pred EEEeCCCCCEEEEccCC-CcEEEE
Confidence 44 5788888888865 457777
No 81
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.51 E-value=0.011 Score=59.18 Aligned_cols=275 Identities=11% Similarity=0.073 Sum_probs=128.3
Q ss_pred EEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEcc----ccCCCcccceeecCCCc
Q 044265 27 AVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLM----ILTDTWCSSGQILADGT 102 (517)
Q Consensus 27 ~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~----~~~~~~c~~~~~l~dG~ 102 (517)
+.-|||+.++-++.+. .++ .| ..+.+|+..++.-.... ..+.......++.++++
T Consensus 49 ~fSpDG~~las~s~d~---------~~~----------wd--~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~ 107 (357)
T 4g56_B 49 RYRRDGALLLAASSLS---------SRT----------WG--GSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG 107 (357)
T ss_dssp EECSSSCEEEEEECSS---------SSS----------CC--EEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE
T ss_pred EECCCCCEEEEEcCCC---------Ccc----------cc--CeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC
Confidence 4458999888876431 100 01 24667776554322111 11222233455678888
Q ss_pred EEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccc
Q 044265 103 VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPF 180 (517)
Q Consensus 103 l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~ 180 (517)
+++.+.. ..+++||.. +.+-........ .....-.+++..+||+.++.|+.+ .++.+| ..+.+... .
T Consensus 108 ~l~~s~d----g~v~lWd~~----~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-g~v~iwd~~~~~~~~--~ 176 (357)
T 4g56_B 108 ILVASDS----GAVELWEIL----EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-FSVKVWDLSQKAVLK--S 176 (357)
T ss_dssp EEEEETT----SCEEEC------------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-SCEEEEETTTTEEEE--E
T ss_pred EEEEECC----CEEEEeecc----ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-CeEEEEECCCCcEEE--E
Confidence 8765542 479999987 322111100011 122334566778899999988865 457777 44432211 1
Q ss_pred hhhccccccCCCCceEEEccCC-cEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEE
Q 044265 181 LADVEDKQMDNLYPYVHLLPNG-HLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIV 257 (517)
Q Consensus 181 l~~t~~~~~~~~yp~~~~~~~G-~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~ 257 (517)
+... ...-..+...+++ .+++.++ ..+.+||.++.+....+ ........ -.++.+-. .+++++
T Consensus 177 ~~~h-----~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~---~~~~~~~~--v~~v~~sp----~~~~~l 242 (357)
T 4g56_B 177 YNAH-----SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI---DFCASDTI--PTSVTWHP----EKDDTF 242 (357)
T ss_dssp ECCC-----SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC---CCTTCCSC--EEEEEECT----TSTTEE
T ss_pred EcCC-----CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeee---eecccccc--ccchhhhh----cccceE
Confidence 1100 0001123344565 4666665 46889999887543211 11001100 11222211 246788
Q ss_pred EEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeeeEEecCC-cEEEEcCccCCCCCcccCCCCccc
Q 044265 258 VCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDMVMLPTG-DVLIINGAQAGTQGFEMASNPCLF 336 (517)
Q Consensus 258 v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~v~lpdG-~v~v~GG~~~g~~g~~~~~~~~~~ 336 (517)
++|+.+. .+..+|+.......+ ..........- ..-|+| ++++.|+.+ + +
T Consensus 243 a~g~~d~--------------~i~~wd~~~~~~~~~-~~~~~~~v~~l-~~sp~~~~~lasgs~D-~------------~ 293 (357)
T 4g56_B 243 ACGDETG--------------NVSLVNIKNPDSAQT-SAVHSQNITGL-AYSYHSSPFLASISED-C------------T 293 (357)
T ss_dssp EEEESSS--------------CEEEEESSCGGGCEE-ECCCSSCEEEE-EECSSSSCCEEEEETT-S------------C
T ss_pred EEeeccc--------------ceeEEECCCCcEeEE-EeccceeEEEE-EEcCCCCCEEEEEeCC-C------------E
Confidence 8887652 123455432110000 11122222221 233676 577777654 2 3
Q ss_pred cEEEeCCCCCCceeccCCCCCccccccceeeecC-CCcEEEecCCCc
Q 044265 337 PVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLP-DGRVLIAGSNPH 382 (517)
Q Consensus 337 ~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~-dG~V~v~GG~~~ 382 (517)
+.+||.++. +-...-. +.... .....-| |+++|++||.+.
T Consensus 294 i~iwd~~~~---~~~~~~~-H~~~V--~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 294 VAVLDADFS---EVFRDLS-HRDFV--TGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp EEEECTTSC---EEEEECC-CSSCE--EEEEECSSSTTEEEEEETTS
T ss_pred EEEEECCCC---cEeEECC-CCCCE--EEEEEeCCCCCEEEEEcCCC
Confidence 689998876 4322111 11111 1122345 899999998654
No 82
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.51 E-value=0.026 Score=56.97 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=79.5
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++.......+........+.++|+.+++|+.+ ..+++||.. +.+... .+.......+++.
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~----~~~~~~----~~~~~~~v~~~~~ 214 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLR----TGQCSL----TLSIEDGVTTVAV 214 (393)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----TTEEEE----EEECSSCEEEEEE
T ss_pred eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECC----CCeeEE----EEEcCCCcEEEEE
Confidence 47789998877655444455444455677899999999864 689999987 443322 1222333345556
Q ss_pred cC-CCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCC
Q 044265 150 LP-DGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 150 L~-dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~ 220 (517)
.+ ||++++.|+.+ ..+.+| ..+.... ...........+. ..-..+...++|+.++.|+ ..+.+||..+.
T Consensus 215 ~~~~~~~l~~~s~d-~~v~iwd~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 215 SPGDGKYIAAGSLD-RAVRVWDSETGFLVERLDSENESGTGHK-DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CSTTCCEEEEEETT-SCEEEEETTTCCEEEEEC------CCCS-SCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred ECCCCCEEEEEcCC-CcEEEEECCCCcEEEeecccccCCCCCC-CCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 66 89998888865 457777 5443321 1110000000000 0111245567999888886 45888998764
No 83
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.51 E-value=0.017 Score=58.92 Aligned_cols=88 Identities=19% Similarity=0.196 Sum_probs=57.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+.+-...-..+.....+..+.++|..+++|+.+ ..+++||.. +..-.. .+. ...+...+.
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~----~~~~~~----~~~~h~~~v~~~~ 241 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQ----TGYCVK----TFTGHREWVRMVR 241 (410)
T ss_dssp CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT----TCCEEE----EEECCSSCEEEEE
T ss_pred eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECC----CCcEEE----EEeCCCccEEEEE
Confidence 46688887766544333444444556677899999999875 689999987 333221 121 233445566
Q ss_pred EcCCCcEEEEcCCCCCceEEe
Q 044265 149 ILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y 169 (517)
..+||++++.|+.+ .++.+|
T Consensus 242 ~~~~g~~l~s~s~D-~~v~vw 261 (410)
T 1vyh_C 242 PNQDGTLIASCSND-QTVRVW 261 (410)
T ss_dssp ECTTSSEEEEEETT-SCEEEE
T ss_pred ECCCCCEEEEEcCC-CeEEEE
Confidence 67799999988865 356666
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.51 E-value=0.0065 Score=71.03 Aligned_cols=246 Identities=13% Similarity=0.111 Sum_probs=132.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++.......+.....+.++.+||+.+++|+.+ ..+++||.. +.+.... ........+.+.
T Consensus 984 ~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g~i~vwd~~----~~~~~~~----~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---SVIQVWNWQ----TGDYVFL----QAHQETVKDFRL 1052 (1249)
T ss_dssp CCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---SBEEEEETT----TTEEECC----BCCSSCEEEEEE
T ss_pred CEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC----CCceEEE----ecCCCcEEEEEE
Confidence 36789988877655444455555556778899999999864 579999987 5554433 222333445666
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCeEEEe
Q 044265 150 LPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNKIARE 225 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~w~~~ 225 (517)
.+++++ +.|+.+ .++.+| ..+.+.. ... . + ...-..+...+||+.++.|+. .+.+||..+.+-.
T Consensus 1053 ~~~~~l-~~~~~d-g~v~vwd~~~~~~~~~~~---~----~-~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~-- 1120 (1249)
T 3sfz_A 1053 LQDSRL-LSWSFD-GTVKVWNVITGRIERDFT---C----H-QGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPL-- 1120 (1249)
T ss_dssp CSSSEE-EEEESS-SEEEEEETTTTCCCEEEE---C----C-SSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCS--
T ss_pred cCCCcE-EEEECC-CcEEEEECCCCceeEEEc---c----c-CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCccee--
Confidence 767665 445544 457777 4433221 110 0 0 011123566789998888874 5788998776532
Q ss_pred cCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecC-------CC
Q 044265 226 YPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMED-------MP 298 (517)
Q Consensus 226 ~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~-------m~ 298 (517)
..+.+. ..+ -.++.+. .+++++++|+.+. . +..+|+.......+..+ ..
T Consensus 1121 -~~l~~h--~~~--v~~~~~s-----~dg~~lat~~~dg-~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~ 1176 (1249)
T 3sfz_A 1121 -HELKGH--NGC--VRCSAFS-----LDGILLATGDDNG-E-------------IRIWNVSDGQLLHSCAPISVEEGTAT 1176 (1249)
T ss_dssp -BCCCCC--SSC--EEEEEEC-----SSSSEEEEEETTS-C-------------CCEEESSSSCCCCCCCCCC-------
T ss_pred -eeeccC--CCc--EEEEEEC-----CCCCEEEEEeCCC-E-------------EEEEECCCCceEEEeccccccccccc
Confidence 122211 100 0122222 2788899988762 1 22344332111111100 01
Q ss_pred cceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEec
Q 044265 299 FGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAG 378 (517)
Q Consensus 299 ~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~G 378 (517)
....-.+....+||+.++++| | .+.+||..+. +-...-....... ....+.+||+.+++|
T Consensus 1177 ~~~~v~~l~fs~dg~~l~s~~---g------------~v~vwd~~~g---~~~~~~~~~~~~i--~~~~~s~dg~~l~~~ 1236 (1249)
T 3sfz_A 1177 HGGWVTDVCFSPDSKTLVSAG---G------------YLKWWNVATG---DSSQTFYTNGTNL--KKIHVSPDFRTYVTV 1236 (1249)
T ss_dssp CCSCCCEEEECTTSSCEEEES---S------------SEEEBCSSSC---BCCCCCCCSSCCC--CCCEECSSSCCEEEE
T ss_pred cCceEEEEEECCCCCEEEECC---C------------eEEEEECCCC---ceeeeeeccCCcc--cEEEECCCCCEEEEe
Confidence 111111224558999998875 2 2678998876 4322111111111 123457999999998
Q ss_pred CCCc
Q 044265 379 SNPH 382 (517)
Q Consensus 379 G~~~ 382 (517)
+...
T Consensus 1237 ~~dg 1240 (1249)
T 3sfz_A 1237 DNLG 1240 (1249)
T ss_dssp CTTC
T ss_pred cCCc
Confidence 8653
No 85
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.51 E-value=0.089 Score=52.47 Aligned_cols=245 Identities=13% Similarity=0.186 Sum_probs=116.0
Q ss_pred eEEEEECCCCC--eEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQ--IRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
....+|+++++ |+.-.. .... +..++.+++||+.... ..+..||+.++ ...|......+....+...+.
T Consensus 114 ~l~a~d~~tG~~~W~~~~~-~~~~--~~p~~~~~~v~v~~~~----g~l~~~d~~tG--~~~W~~~~~~~~~~~~~~~~~ 184 (376)
T 3q7m_A 114 QVYALNTSDGTVAWQTKVA-GEAL--SRPVVSDGLVLIHTSN----GQLQALNEADG--AVKWTVNLDMPSLSLRGESAP 184 (376)
T ss_dssp EEEEEETTTCCEEEEEECS-SCCC--SCCEEETTEEEEECTT----SEEEEEETTTC--CEEEEEECCC-----CCCCCC
T ss_pred EEEEEECCCCCEEEEEeCC-CceE--cCCEEECCEEEEEcCC----CeEEEEECCCC--cEEEEEeCCCCceeecCCCCc
Confidence 46789998887 543211 1111 2223457777765432 47899999743 456876411111112222333
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCC--ceec-cchhhccccccCCCCceEEEccCCcEEEEE-CCceEEEeCCCCe-
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNG--AVSF-PFLADVEDKQMDNLYPYVHLLPNGHLFIFA-NDKAVMYDYETNK- 221 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~--w~~~-~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G-g~~~~~ydp~t~~- 221 (517)
+.. +|.||+ |..+ ..+-.+ +.+.+ |... ...................++.++.||+.+ +..+.++|+++++
T Consensus 185 ~~~-~~~v~~-g~~~-g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 185 TTA-FGAAVV-GGDN-GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp EEE-TTEEEE-CCTT-TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE
T ss_pred EEE-CCEEEE-EcCC-CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE
Confidence 444 777765 4332 334455 55432 4421 100000000000000011123478888876 3568899998874
Q ss_pred -EEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcc
Q 044265 222 -IAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFG 300 (517)
Q Consensus 222 -w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~ 300 (517)
|... .+ .. ..... .+++||+..... .+.++|+.+....|+...+...
T Consensus 262 ~w~~~---~~----~~----~~~~~------~~~~l~~~~~~g---------------~l~~~d~~tG~~~w~~~~~~~~ 309 (376)
T 3q7m_A 262 MWKRE---LG----SV----NDFIV------DGNRIYLVDQND---------------RVMALTIDGGVTLWTQSDLLHR 309 (376)
T ss_dssp EEEEC---CC----CE----EEEEE------ETTEEEEEETTC---------------CEEEEETTTCCEEEEECTTTTS
T ss_pred Eeecc---CC----CC----CCceE------ECCEEEEEcCCC---------------eEEEEECCCCcEEEeecccCCC
Confidence 5431 11 11 11111 277888765321 2345666544456876533322
Q ss_pred eeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecC
Q 044265 301 RIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGS 379 (517)
Q Consensus 301 R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG 379 (517)
.... .++.+++||+... + | .+.+||+++.. ..|+.-.. ...... ..+..+|+||+...
T Consensus 310 -~~~~-~~~~~~~l~v~~~-~-g------------~l~~~d~~tG~-~~~~~~~~--~~~~~~--~~~~~~~~l~v~~~ 367 (376)
T 3q7m_A 310 -LLTS-PVLYNGNLVVGDS-E-G------------YLHWINVEDGR-FVAQQKVD--SSGFQT--EPVAADGKLLIQAK 367 (376)
T ss_dssp -CCCC-CEEETTEEEEECT-T-S------------EEEEEETTTCC-EEEEEECC--TTCBCS--CCEEETTEEEEEBT
T ss_pred -cccC-CEEECCEEEEEeC-C-C------------eEEEEECCCCc-EEEEEecC--CCccee--CCEEECCEEEEEeC
Confidence 2223 3335888887532 1 2 25789998861 24543211 111121 22345888888654
No 86
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.50 E-value=0.017 Score=57.24 Aligned_cols=146 Identities=13% Similarity=0.042 Sum_probs=73.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCC-CCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDL-DGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~-~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
++..+|+++++++.+...+...-...++.+||+.+.++... +....+.+|+.... +.+...+ ......-..+...
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~--~g~~~~~--~~~~~~~~~p~~~ 105 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE--KGTLHLL--NTQKTMGADPCYL 105 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT--TTEEEEE--EEEECSSSCEEEE
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC--CCcEEEe--eEeccCCCCcEEE
Confidence 46677899999887764432333345667899855555442 12356766654411 3555554 3333222234444
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCce-eccc-hhhcc-cc---ccCCCCce-EEEccCCc-EEEEEC--CceEEEeC
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPF-LADVE-DK---QMDNLYPY-VHLLPNGH-LFIFAN--DKAVMYDY 217 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~-l~~t~-~~---~~~~~yp~-~~~~~~G~-iyv~Gg--~~~~~ydp 217 (517)
.+ ||+.+++......++.+| ...++.. .... ..... .. ......++ +.+.+||+ ||+... ..+.+|+.
T Consensus 106 ~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 184 (361)
T 3scy_A 106 TT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNI 184 (361)
T ss_dssp EE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 44 777655555555667777 3322211 1100 00000 00 00011223 56678998 666653 46778876
Q ss_pred CCC
Q 044265 218 ETN 220 (517)
Q Consensus 218 ~t~ 220 (517)
..+
T Consensus 185 ~~~ 187 (361)
T 3scy_A 185 NPN 187 (361)
T ss_dssp CTT
T ss_pred cCC
Confidence 543
No 87
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.49 E-value=0.015 Score=62.74 Aligned_cols=219 Identities=9% Similarity=0.054 Sum_probs=115.8
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||+.+.+-...-..|...-...++.+||+++++|+.+ ..+++||.. +.+.... ..+. ....-.+++
T Consensus 40 ~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d---~~v~lWd~~----~~~~~~~--~~~~~~~~~v~~v~ 110 (611)
T 1nr0_A 40 SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH---GNVRIWDTT----QTTHILK--TTIPVFSGPVKDIS 110 (611)
T ss_dssp EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEESS----STTCCEE--EEEECSSSCEEEEE
T ss_pred EEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC---CCEEEeECC----CCcceee--EeecccCCceEEEE
Confidence 46788887655433333444444456678999999999874 689999986 2222111 1121 223345677
Q ss_pred EcCCCcEEEEcCCCCC---ceEEeCCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEEC--CceEEEeCCCCeE
Q 044265 149 ILPDGSVIILGGKGAN---TVEYYPPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DKAVMYDYETNKI 222 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~---~~E~yP~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~~~~ydp~t~~w 222 (517)
.-+||+.++.+|.+.. .+.+|... +.. ..+... . ..-..+...+++. +++.|+ ..+.+||..+.+.
T Consensus 111 fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~~--~~l~gh----~-~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~ 182 (611)
T 1nr0_A 111 WDSESKRIAAVGEGRERFGHVFLFDTG-TSN--GNLTGQ----A-RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF 182 (611)
T ss_dssp ECTTSCEEEEEECCSSCSEEEEETTTC-CBC--BCCCCC----S-SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE
T ss_pred ECCCCCEEEEEECCCCceeEEEEeeCC-CCc--ceecCC----C-CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE
Confidence 7889999888876532 33444211 100 001100 0 0011244557775 567776 4688999887765
Q ss_pred EEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCC--CceecC----
Q 044265 223 AREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADP--TWEMED---- 296 (517)
Q Consensus 223 ~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~--~W~~~~---- 296 (517)
...+ .+. ... -.++.+. .++++++.|+.+.. +..+|+..... .+....
T Consensus 183 ~~~l---~~H-~~~---V~~v~fs-----pdg~~las~s~D~~--------------i~lwd~~~g~~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 183 KSTF---GEH-TKF---VHSVRYN-----PDGSLFASTGGDGT--------------IVLYNGVDGTKTGVFEDDSLKNV 236 (611)
T ss_dssp EEEE---CCC-SSC---EEEEEEC-----TTSSEEEEEETTSC--------------EEEEETTTCCEEEECBCTTSSSC
T ss_pred eeee---ccc-cCc---eEEEEEC-----CCCCEEEEEECCCc--------------EEEEECCCCcEeeeecccccccc
Confidence 5433 221 111 0122222 17889999987621 22233221000 000000
Q ss_pred CCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCC
Q 044265 297 MPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQP 345 (517)
Q Consensus 297 m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~ 345 (517)
-........ ..-|||+.++.|+.+ + ++.+||..+.
T Consensus 237 ~h~~~V~~v-~~spdg~~l~s~s~D-~------------~v~lWd~~~~ 271 (611)
T 1nr0_A 237 AHSGSVFGL-TWSPDGTKIASASAD-K------------TIKIWNVATL 271 (611)
T ss_dssp SSSSCEEEE-EECTTSSEEEEEETT-S------------EEEEEETTTT
T ss_pred ccCCCEEEE-EECCCCCEEEEEeCC-C------------eEEEEeCCCC
Confidence 112233322 455899999998865 2 4689998876
No 88
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.47 E-value=0.074 Score=51.53 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=77.4
Q ss_pred eEEEEECCCCCe-EEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQI-RPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w-~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.+||+.+++. ..........+.+.++.+||+.++++....+...+.+||.. +.+.... +........++
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~----~~~~~~~----~~~~~~~~~~~ 134 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL----KNKFIST----IPIPYDAVGIA 134 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT----TTEEEEE----EECCTTEEEEE
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC----CCCeEEE----EECCCCccceE
Confidence 477899999886 33222233334335677899876654432222389999987 4444332 33333335677
Q ss_pred EcCCCc-EEEEcCCCCCc-eEEe-CCCCCc-eeccchhhccccccCCCCc-eEEEccCCc-EEEEEC--CceEEEeCCCC
Q 044265 149 ILPDGS-VIILGGKGANT-VEYY-PPRNGA-VSFPFLADVEDKQMDNLYP-YVHLLPNGH-LFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 149 ~L~dG~-v~vvGG~~~~~-~E~y-P~~~~w-~~~~~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~Gg--~~~~~ydp~t~ 220 (517)
.-+||+ +|+.+.. ... +.+| -..++. .... .. .. .....+ .+.+.+||+ +|+.+. ..+.+||..++
T Consensus 135 ~spdg~~l~~~~~~-~~~~i~~~~~~~~g~~~~~~-~~-~~---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 135 ISPNGNGLILIDRS-SANTVRRFKIDADGVLFDTG-QE-FI---SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp ECTTSSCEEEEEET-TTTEEEEEEECTTCCEEEEE-EE-EE---CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred ECCCCCEEEEEecC-CCceEEEEEECCCCcEeecC-Cc-cc---cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 888997 6665443 344 7777 222221 1110 00 00 011122 345568997 777763 56889999887
Q ss_pred eE
Q 044265 221 KI 222 (517)
Q Consensus 221 ~w 222 (517)
+.
T Consensus 209 ~~ 210 (331)
T 3u4y_A 209 EN 210 (331)
T ss_dssp TS
T ss_pred cc
Confidence 75
No 89
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.46 E-value=0.056 Score=50.77 Aligned_cols=219 Identities=15% Similarity=0.108 Sum_probs=107.4
Q ss_pred ceeecCCCcEEE-ecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CC
Q 044265 94 SGQILADGTVLQ-TGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PP 171 (517)
Q Consensus 94 ~~~~l~dG~l~v-~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~ 171 (517)
+.++..+|++|+ .... ...+.+||+. +..........+ ..-.+++.-++|++|+... ...+.+| +.
T Consensus 28 ~i~~~~~g~l~v~~~~~---~~~i~~~~~~----~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~--~~~i~~~d~~ 95 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGM---YGRVVKLATG----STGTTVLPFNGL---YQPQGLAVDGAGTVYVTDF--NNRVVTLAAG 95 (270)
T ss_dssp EEEECTTCCEEEEECSS---SCEEEEECC---------EECCCCSC---CSCCCEEECTTCCEEEEET--TTEEEEECTT
T ss_pred ceEECCCCCEEEEccCC---CCcEEEecCC----CcccceEeeCCc---CCcceeEECCCCCEEEEcC--CCEEEEEeCC
Confidence 344567899998 5332 2578889987 443333200111 1233566777899998865 3456666 55
Q ss_pred CCCceeccchhhccccccCCCCc-eEEEccCCcEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecc
Q 044265 172 RNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALE 248 (517)
Q Consensus 172 ~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~ 248 (517)
.......... ....| .+.+.++|+||+... ..+.+||..+..... ... . ....+ ...++-+
T Consensus 96 ~~~~~~~~~~--------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~~~-~--~~~~p--~~i~~~~-- 159 (270)
T 1rwi_B 96 SNNQTVLPFD--------GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPF-T--GLNDP--DGVAVDN-- 159 (270)
T ss_dssp CSCCEECCCC--------SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE-CCC-C--SCCSC--CCEEECT--
T ss_pred CceEeeeecC--------CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe-ecc-c--cCCCc--eeEEEeC--
Confidence 4332221110 00123 234456899998753 567888877665432 211 1 11122 1122222
Q ss_pred cCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCcee-c-CCCcceeeeeeEEecCCcEEEEcCccCCCCC
Q 044265 249 GDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEM-E-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQG 326 (517)
Q Consensus 249 ~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~-~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g 326 (517)
+++||+..... ..+.++|+.. ...... . .+..++ +.++-++|+||+..... +
T Consensus 160 ----~g~l~v~~~~~--------------~~i~~~~~~~-~~~~~~~~~~~~~p~---~i~~d~~g~l~v~~~~~-~--- 213 (270)
T 1rwi_B 160 ----SGNVYVTDTDN--------------NRVVKLEAES-NNQVVLPFTDITAPW---GIAVDEAGTVYVTEHNT-N--- 213 (270)
T ss_dssp ----TCCEEEEEGGG--------------TEEEEECTTT-CCEEECCCSSCCSEE---EEEECTTCCEEEEETTT-S---
T ss_pred ----CCCEEEEECCC--------------CEEEEEecCC-CceEeecccCCCCce---EEEECCCCCEEEEECCC-C---
Confidence 67888875432 1233444331 111111 1 222222 22344788999976432 1
Q ss_pred cccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCC
Q 044265 327 FEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 327 ~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
.+.+||++.. .-........ ..-.+ ..+.+||++||+...
T Consensus 214 ---------~v~~~~~~~~---~~~~~~~~~~-~~p~~-i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 214 ---------QVVKLLAGST---TSTVLPFTGL-NTPLA-VAVDSDRTVYVADRG 253 (270)
T ss_dssp ---------CEEEECTTCS---CCEECCCCSC-SCEEE-EEECTTCCEEEEEGG
T ss_pred ---------cEEEEcCCCC---cceeeccCCC-CCcee-EEECCCCCEEEEECC
Confidence 3678998765 3222211111 11122 345689999998753
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.45 E-value=0.024 Score=54.96 Aligned_cols=142 Identities=10% Similarity=0.088 Sum_probs=74.7
Q ss_pred eEEEEECC-CCCeEEcccc-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQ-TNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~-t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||.. ++++..+... +.......++.+||+.+++++..+ ..+.+||.... +.++... ..+.....-..+
T Consensus 16 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~--~~~~~~~--~~~~~~~~~~~~ 89 (343)
T 1ri6_A 16 QIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPD--DGALTFA--AESALPGSLTHI 89 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTT--TCCEEEE--EEEECSSCCSEE
T ss_pred eEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCC--CCceeec--cccccCCCCcEE
Confidence 36677763 4555544322 222233456678998666666532 57888776411 3456554 333333333456
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCC-ceeccchhhccccccCCCCceEEEccCCc-EEEEE--CCceEEEeCCC-Ce
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNG-AVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFA--NDKAVMYDYET-NK 221 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~-w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~G--g~~~~~ydp~t-~~ 221 (517)
+.-+||+.+++++.....+.+| ..... ......+.. . .. -..+.+.++|+ ||+.. ...+.+||..+ ++
T Consensus 90 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~-~~-~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG----L-DG-CHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC----C-TT-BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred EEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC----C-CC-ceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 6778998666665545567777 42111 111111100 0 00 11245667886 66654 35788999987 65
Q ss_pred EE
Q 044265 222 IA 223 (517)
Q Consensus 222 w~ 223 (517)
..
T Consensus 164 ~~ 165 (343)
T 1ri6_A 164 LV 165 (343)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 91
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.45 E-value=0.017 Score=58.61 Aligned_cols=139 Identities=11% Similarity=0.063 Sum_probs=78.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||+.+++.......+.......++.++|+.+++.+..+ ..+.+||+. +.+.... +.....-.+++.
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~----~~~~~~~----~~~~~~~~~~~~ 261 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRK----TKLEIRK----TDKIGLPRGLLL 261 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETT----TTEEEEE----CCCCSEEEEEEE
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECC----CCcEEEE----ecCCCCceEEEE
Confidence 578999988776543333344444456677887664444322 589999987 4444332 222223445666
Q ss_pred cCCCcEEEEcCCCC-------CceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEEC--CceEEEeCC
Q 044265 150 LPDGSVIILGGKGA-------NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DKAVMYDYE 218 (517)
Q Consensus 150 L~dG~v~vvGG~~~-------~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~~~~ydp~ 218 (517)
.++|+.+++++... ..+.+| +.+.+.... +... . .-..+...++|+ +|+.+. ..+.+||..
T Consensus 262 ~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~--~~~~-----~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 262 SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT--IGPP-----G-NKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE--EEEE-----E-CEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee--ccCC-----C-CcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 77898777776432 245567 544322211 0000 0 001244567885 777754 468899999
Q ss_pred CCeEEEec
Q 044265 219 TNKIAREY 226 (517)
Q Consensus 219 t~~w~~~~ 226 (517)
+++....+
T Consensus 334 ~~~~~~~~ 341 (433)
T 3bws_A 334 EKKVQKSI 341 (433)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEe
Confidence 88766444
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.43 E-value=0.0074 Score=64.52 Aligned_cols=277 Identities=10% Similarity=0.006 Sum_probs=138.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecC--CCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSP--CEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp--~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||..+++....-..... ..+.++.+||+.+.+++.+ ..+.+||. . +.+- . ..+....+-.++
T Consensus 160 ~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~----t~~~--~--~~i~~g~~p~~v 227 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRD---ARIDMIDLWAK----EPTK--V--AEIKIGIEARSV 227 (543)
T ss_dssp EEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETT---SEEEEEETTSS----SCEE--E--EEEECCSEEEEE
T ss_pred eEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCC---CeEEEEECcCC----CCcE--E--EEEecCCCcceE
Confidence 477899999886543221222 3345578899887777653 78999999 5 3332 2 234444444556
Q ss_pred EEcC----CCcEEEEcCCCCCceEEe-CCCCCce-eccchhhcccc---ccCCCCceEEEccCCcEEEEEC---CceEEE
Q 044265 148 QILP----DGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDK---QMDNLYPYVHLLPNGHLFIFAN---DKAVMY 215 (517)
Q Consensus 148 ~~L~----dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~---~~~~~yp~~~~~~~G~iyv~Gg---~~~~~y 215 (517)
+.-+ ||+.++++.....++.+| ..+.+-. ..+....+.+. ++...-......++++.+++.. ..+.++
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vv 307 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV 307 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEE
Confidence 6777 899888887655677777 4443322 11110000000 0000111234456666555543 467888
Q ss_pred eCCCCeEE--EecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCce
Q 044265 216 DYETNKIA--REYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWE 293 (517)
Q Consensus 216 dp~t~~w~--~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~ 293 (517)
|..+.+-. ..+ +. ..+++ ...+-| +++.+++.... .+++..+|... .+-.
T Consensus 308 d~~~~~~l~~~~i---~~--~~~~~--~~~~sp------dg~~l~va~~~-------------~~~v~v~D~~t--g~l~ 359 (543)
T 1nir_A 308 NYKDIDNLTVTSI---GA--APFLH--DGGWDS------SHRYFMTAANN-------------SNKVAVIDSKD--RRLS 359 (543)
T ss_dssp ECTTSSSCEEEEE---EC--CSSCC--CEEECT------TSCEEEEEEGG-------------GTEEEEEETTT--TEEE
T ss_pred EecCCCcceeEEe---cc--CcCcc--CceECC------CCCEEEEEecC-------------CCeEEEEECCC--CeEE
Confidence 98764321 122 11 11221 222333 66644433321 12233455432 1111
Q ss_pred --e--cCCCcceeeeeeEEecC-CcEEEEcCccCCCCCcccCCCCccccEEEeCCCCC--CceeccCCCCCccccc-cce
Q 044265 294 --M--EDMPFGRIMGDMVMLPT-GDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPA--GLRFMTLNPGTIPRMY-HST 365 (517)
Q Consensus 294 --~--~~m~~~R~~~~~v~lpd-G~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~--g~~W~~~~~~~~~R~y-hs~ 365 (517)
. ..+|.+-.... ..-|+ |++|+.+....+ ++.+||.++.. ...|+.+..++..... ..
T Consensus 360 ~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d~------------~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~- 425 (543)
T 1nir_A 360 ALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGDG------------SISLIGTDPKNHPQYAWKKVAELQGQGGGSLF- 425 (543)
T ss_dssp EEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSSS------------EEEEEECCTTTCTTTBTSEEEEEECSCSCCCC-
T ss_pred EeeccCCCCCCCCCcc-cCCCCCccEEEeccCCCc------------eEEEEEeCCCCCchhcCeEEEEEEcCCCCceE-
Confidence 1 13444322222 33466 889988643211 46788876621 1137655444332211 11
Q ss_pred eeecCCCcEEEecCCCccccccCCCCCCceeeEEEeCCccC
Q 044265 366 ANLLPDGRVLIAGSNPHYFYKFNAEFPTELRIEAFSPEYLS 406 (517)
Q Consensus 366 a~ll~dG~V~v~GG~~~~~~~~~~~~~~~~~vE~y~P~yl~ 406 (517)
...-|||+-+.++...+... + ...+|-+|+...+.
T Consensus 426 v~~~pdg~~l~v~~~~~~~~----~--~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 426 IKTHPKSSHLYVDTTFNPDA----R--ISQSVAVFDLKNLD 460 (543)
T ss_dssp EECCTTCCEEEECCTTCSSH----H--HHTCEEEEETTCTT
T ss_pred EEcCCCCCcEEEecCCCCCc----c--cCceEEEEECCCCC
Confidence 23469999888876322100 0 03368888887764
No 93
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.43 E-value=0.018 Score=56.74 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=74.5
Q ss_pred eEEEEECCCCCeEEcccc--CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-------
Q 044265 70 HSAILDLQTNQIRPLMIL--TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN------- 140 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~------- 140 (517)
.+.+||..+++++.+... +.......++.+||+.+++.+.. ...+.+||... ..+.... ..+..
T Consensus 64 ~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~---~g~~~~~--~~~~~~~~~p~~ 136 (347)
T 3hfq_A 64 GIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAA---DGALTLT--DTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECT---TSCEEEE--EEEECCCCCSST
T ss_pred eEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCC---CCCeeec--ceeecCCCCCCc
Confidence 477899888887765531 22223345667899866655533 25788888752 2233322 11111
Q ss_pred ---cCccceeEEcCCCcEEEEcCCCCCceEEe-CC-CCCceeccchhhccccccCCCCc-eEEEccCCc-EEEEEC--Cc
Q 044265 141 ---GRWYGTDQILPDGSVIILGGKGANTVEYY-PP-RNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGH-LFIFAN--DK 211 (517)
Q Consensus 141 ---~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~-~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~Gg--~~ 211 (517)
...-+.++.-+||++|+.+ .....+.+| .. ............ +....| ++.+.+||+ +|+... ..
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~-~~~~~v~~~~~~~~g~~~~~~~~~~-----~~g~~p~~~~~spdg~~l~v~~~~~~~ 210 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVID-LGSDKVYVYNVSDAGQLSEQSVLTM-----EAGFGPRHLVFSPDGQYAFLAGELSSQ 210 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEE-TTTTEEEEEEECTTSCEEEEEEEEC-----CTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred cccCCCceEEEECCCCcEEEEe-CCCCEEEEEEECCCCcEEEeeeEEc-----CCCCCCceEEECCCCCEEEEEeCCCCE
Confidence 1123456778899966654 334567777 44 222221110000 001112 356678998 776653 45
Q ss_pred eEEEeCC--CCeEE
Q 044265 212 AVMYDYE--TNKIA 223 (517)
Q Consensus 212 ~~~ydp~--t~~w~ 223 (517)
+.+||.. ++++.
T Consensus 211 v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 211 IASLKYDTQTGAFT 224 (347)
T ss_dssp EEEEEEETTTTEEE
T ss_pred EEEEEecCCCCceE
Confidence 6677655 46553
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.42 E-value=0.043 Score=56.27 Aligned_cols=217 Identities=11% Similarity=0.087 Sum_probs=111.1
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeec--CCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccC------------
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQIL--ADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDD------------ 135 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l--~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~------------ 135 (517)
.+.+||..+++....-..+........+. .++.++++|+.+ ..+.+||.... .........
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLPKE--SSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECCCC--CCC------CCSSEEESCGGG
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCCCC--cccccccccCCcceEeeccCC
Confidence 57899998876544333333322222333 588999999864 57888987632 111100000
Q ss_pred -----ccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC
Q 044265 136 -----VELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN 209 (517)
Q Consensus 136 -----~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg 209 (517)
..+. .......++-++++.+++|+.+ ..+.+| ..+.+... .+... . ..-..+...++|+.++.|+
T Consensus 259 ~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~d-~~i~vwd~~~~~~~~--~~~~~----~-~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 259 NPYFVGVLR-GHMASVRTVSGHGNIVVSGSYD-NTLIVWDVAQMKCLY--ILSGH----T-DRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp CTTEEEEEC-CCSSCEEEEEEETTEEEEEETT-SCEEEEETTTTEEEE--EECCC----S-SCEEEEEEETTTTEEEEEE
T ss_pred CeEEEEEcc-CccceEEEEcCCCCEEEEEeCC-CeEEEEECCCCcEEE--EecCC----C-CCEEEEEEcCCCCEEEEEe
Confidence 0011 1111222334578888888865 356777 43322111 01000 0 0111244567888888886
Q ss_pred --CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecC
Q 044265 210 --DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATS 287 (517)
Q Consensus 210 --~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~ 287 (517)
..+.+||..+++-...+ .+. .. .... +. .+++.+++|+.+ + .+..+|+..
T Consensus 330 ~dg~i~vwd~~~~~~~~~~---~~h-~~----~v~~-~~-----~~~~~l~s~s~d-g-------------~v~vwd~~~ 381 (464)
T 3v7d_B 330 MDTTIRIWDLENGELMYTL---QGH-TA----LVGL-LR-----LSDKFLVSAAAD-G-------------SIRGWDAND 381 (464)
T ss_dssp TTSCEEEEETTTTEEEEEE---CCC-SS----CEEE-EE-----ECSSEEEEEETT-S-------------EEEEEETTT
T ss_pred CCCcEEEEECCCCcEEEEE---eCC-CC----cEEE-EE-----EcCCEEEEEeCC-C-------------cEEEEECCC
Confidence 46889999988765443 211 11 1111 11 156778888765 2 123455442
Q ss_pred CCCCceecCCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCC
Q 044265 288 ADPTWEMEDMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQP 345 (517)
Q Consensus 288 ~~~~W~~~~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~ 345 (517)
....+.. ...........-++|+++++|+ + | .+.+||.++.
T Consensus 382 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 382 YSRKFSY---HHTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp CCEEEEE---ECTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred Cceeeee---cCCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 1111111 1111112224557999999876 3 2 3689999887
No 95
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.41 E-value=0.01 Score=57.75 Aligned_cols=164 Identities=15% Similarity=0.164 Sum_probs=91.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+++-...-..+.......++.++++++++|+.+ ..+++||.. +. +... ..+. ....-.+++
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~----~~-~~~~--~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWE----NN-WALE--QTFEGHEHFVMCVA 147 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEEGG----GT-TEEE--EEECCCCSCEEEEE
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC---CeEEEEECC----CC-cchh--hhhcccCCcEEEEE
Confidence 57899998887544333455445556677899999999875 689999986 22 2221 1122 222334555
Q ss_pred EcC-CCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEc--cCCcEEEEEC--CceEEEeCCCCe
Q 044265 149 ILP-DGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLL--PNGHLFIFAN--DKAVMYDYETNK 221 (517)
Q Consensus 149 ~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~--~~G~iyv~Gg--~~~~~ydp~t~~ 221 (517)
..+ ++++++.|+.+ .++.+| .....-. .... . .. ..-...... +++++++.|+ ..+.+||..+.+
T Consensus 148 ~~p~~~~~l~sgs~D-~~v~iwd~~~~~~~~~~~~--~----~~-~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 148 FNPKDPSTFASGCLD-RTVKVWSLGQSTPNFTLTT--G----QE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp ECTTCTTEEEEEETT-SEEEEEETTCSSCSEEEEC--C----CT-TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE
T ss_pred ECCCCCCEEEEEeCC-CeEEEEECCCCCccceecc--C----Cc-CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc
Confidence 555 67888888876 467777 3322111 1100 0 00 000112222 3777888876 468899999887
Q ss_pred EEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 222 IAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 222 w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
-...+ .+. ...- ...+..| ++++++.|+.+
T Consensus 220 ~~~~~---~~h-~~~v--~~~~~~p------~~~~l~s~s~D 249 (304)
T 2ynn_A 220 CVATL---EGH-MSNV--SFAVFHP------TLPIIISGSED 249 (304)
T ss_dssp EEEEE---ECC-SSCE--EEEEECS------SSSEEEEEETT
T ss_pred cceee---CCC-CCCE--EEEEECC------CCCEEEEEcCC
Confidence 55433 221 1100 1122222 67788888876
No 96
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.40 E-value=0.1 Score=51.29 Aligned_cols=148 Identities=16% Similarity=0.132 Sum_probs=81.0
Q ss_pred eEEEEECCCCCeEEccc-cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCC--ceEeccCccc-----cCc
Q 044265 70 HSAILDLQTNQIRPLMI-LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLC--DWVELDDVEL-----VNG 141 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~--~W~~~~~~~m-----~~~ 141 (517)
.+.+||+.+++...... ..-....+.++.++|+||++... ...+.+||+. .. .-.... ... ...
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~----g~~~~~~~~~-~~~~~g~~~~~ 141 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH----SKEGPLLILG-RSMQPGSDQNH 141 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT----CSSCCSEEES-BTTBCCCSTTC
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC----CCeEEEEEec-ccCCCCCCccc
Confidence 58899999888764322 11123334566789999998754 3689999986 22 111110 000 011
Q ss_pred C-ccceeEEcC-CCcEEEEcCCCCCceEEeCCCCCce-eccchhhccc-c-ccCCCCce-EEEccC-CcEEEEEC--Cce
Q 044265 142 R-WYGTDQILP-DGSVIILGGKGANTVEYYPPRNGAV-SFPFLADVED-K-QMDNLYPY-VHLLPN-GHLFIFAN--DKA 212 (517)
Q Consensus 142 R-~~~s~~~L~-dG~v~vvGG~~~~~~E~yP~~~~w~-~~~~l~~t~~-~-~~~~~yp~-~~~~~~-G~iyv~Gg--~~~ 212 (517)
- .-.++++-+ +|++||..+.....+.+|....... ..... ...+ . ...-.+|. +++-++ |+||+... ..+
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRI 220 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEE
Confidence 1 122456666 8999999864445667773222221 11100 0000 0 00001243 344467 89999863 568
Q ss_pred EEEeCCCCeEEEec
Q 044265 213 VMYDYETNKIAREY 226 (517)
Q Consensus 213 ~~ydp~t~~w~~~~ 226 (517)
.+||+.+++....+
T Consensus 221 ~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 221 QCFKTDTKEFVREI 234 (329)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCcEEEEE
Confidence 99999977776554
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.39 E-value=0.0011 Score=66.28 Aligned_cols=112 Identities=12% Similarity=0.131 Sum_probs=64.5
Q ss_pred eeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-CccceeEEcCCCcEEEEcCCCCCceEEe-CCC
Q 044265 95 GQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWYGTDQILPDGSVIILGGKGANTVEYY-PPR 172 (517)
Q Consensus 95 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~ 172 (517)
.++.+||+++++|+.+ ..+++||.. +..|... ..+... ..-.+++..++|+.++.|+.+ .++.+| ..+
T Consensus 17 ~~~s~~g~~l~~~~~d---~~i~iw~~~----~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~d-~~v~vwd~~~ 86 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTAT---NQVELYEQD----GNGWKHA--RTFSDHDKIVTCVDWAPKSNRIVTCSQD-RNAYVYEKRP 86 (377)
T ss_dssp CEECSSSSEEECCCSS---SCBCEEEEE----TTEEEEC--CCBCCCSSCEEEEEECTTTCCEEEEETT-SSEEEC----
T ss_pred EEECCCCCEEEEecCC---CEEEEEEcc----CCceEEE--EEEecCCceEEEEEEeCCCCEEEEEeCC-CeEEEEEcCC
Confidence 4566799999999864 578899988 6667665 445432 334556677889988888865 457777 443
Q ss_pred CC-ceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCe
Q 044265 173 NG-AVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNK 221 (517)
Q Consensus 173 ~~-w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~ 221 (517)
.. +.....+... . ..-..+...++|++++.|+ ..+.+||..+++
T Consensus 87 ~~~~~~~~~~~~~----~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 87 DGTWKQTLVLLRL----N-RAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp --CCCCEEECCCC----S-SCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred CCceeeeeEeccc----C-CceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 33 3211111100 0 0111234456888888876 457889988764
No 98
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.39 E-value=0.037 Score=56.64 Aligned_cols=238 Identities=11% Similarity=0.062 Sum_probs=120.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++....-..+..... .+..++.++++|+.+ ..+++||.. +.+-.. .+......-....
T Consensus 140 ~i~vwd~~~~~~~~~~~~h~~~v~--~~~~~~~~l~s~~~d---g~i~vwd~~----~~~~~~----~~~~h~~~v~~~~ 206 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVGHTGGVW--SSQMRDNIIISGSTD---RTLKVWNAE----TGECIH----TLYGHTSTVRCMH 206 (445)
T ss_dssp CEEEEETTTCCEEEECCCCSSCEE--EEEEETTEEEEEETT---SCEEEEETT----TTEEEE----EECCCSSCEEEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEE--EEEecCCEEEEEeCC---CeEEEEECC----cCcEEE----EECCCCCcEEEEE
Confidence 477899988775543333332221 122357788888864 679999987 333221 1222222222333
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEec
Q 044265 150 LPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREY 226 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~ 226 (517)
. +++.+++|+.+ .++.+| ..+.+... .+.. ...+...+..+|+.++.|+ ..+.+||..+.+....+
T Consensus 207 ~-~~~~l~s~s~d-g~i~~wd~~~~~~~~--~~~~-------~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 275 (445)
T 2ovr_B 207 L-HEKRVVSGSRD-ATLRVWDIETGQCLH--VLMG-------HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 275 (445)
T ss_dssp E-ETTEEEEEETT-SEEEEEESSSCCEEE--EEEC-------CSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEE
T ss_pred e-cCCEEEEEeCC-CEEEEEECCCCcEEE--EEcC-------CcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEe
Confidence 3 66777777765 467777 44333211 0100 0112233444888888876 46889999888765443
Q ss_pred CCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCcceeeeee
Q 044265 227 PPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMGDM 306 (517)
Q Consensus 227 p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~~~ 306 (517)
. +. .. + -.++. .+++.+++|+.+. .+..+|+....... .+........+
T Consensus 276 ~---~~-~~-~--v~~~~-------~~~~~l~~~~~d~--------------~i~i~d~~~~~~~~---~~~~~~~~v~~ 324 (445)
T 2ovr_B 276 Q---GH-TN-R--VYSLQ-------FDGIHVVSGSLDT--------------SIRVWDVETGNCIH---TLTGHQSLTSG 324 (445)
T ss_dssp C---CC-SS-C--EEEEE-------ECSSEEEEEETTS--------------CEEEEETTTCCEEE---EECCCCSCEEE
T ss_pred c---CC-CC-c--eEEEE-------ECCCEEEEEeCCC--------------eEEEEECCCCCEEE---EEcCCcccEEE
Confidence 2 11 11 0 11221 1677788887652 12334443211111 11111111222
Q ss_pred EEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCcee-ccCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 307 VMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRF-MTLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 307 v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W-~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
+. ++++.+++|+.+ | .+.+||..+. +- ..+.... . ....+..+..+++.+++|+.+
T Consensus 325 ~~-~~~~~l~~~~~d-g------------~i~vwd~~~~---~~~~~~~~~~-~-~~~~v~~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 325 ME-LKDNILVSGNAD-S------------TVKIWDIKTG---QCLQTLQGPN-K-HQSAVTCLQFNKNFVITSSDD 381 (445)
T ss_dssp EE-EETTEEEEEETT-S------------CEEEEETTTC---CEEEEECSTT-S-CSSCEEEEEECSSEEEEEETT
T ss_pred EE-EeCCEEEEEeCC-C------------eEEEEECCCC---cEEEEEccCC-C-CCCCEEEEEECCCEEEEEeCC
Confidence 33 478888888765 2 3688998765 32 1221100 0 111223344588999999865
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.39 E-value=0.052 Score=55.58 Aligned_cols=244 Identities=11% Similarity=0.123 Sum_probs=123.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~~s~~ 148 (517)
.+.+||..+++-...-..+...........++ ++++|+.+ ..+.+||.. +.+-.. .+.. ...-.+..
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d---g~i~vwd~~----~~~~~~----~~~~h~~~v~~l~ 210 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD---RTVRVWDIK----KGCCTH----VFEGHNSTVRCLD 210 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT---SCEEEEETT----TTEEEE----EECCCSSCEEEEE
T ss_pred cEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC---CCEEEEECC----CCcEEE----EECCCCCccEEEE
Confidence 47789988876544333344333334445566 77787764 679999987 333221 1221 11122233
Q ss_pred Ec--CCCcEEEEcCCCCCceEEe-CCCCCceec-------------c----chhhccccccCCCCceEEEccCCcEEEEE
Q 044265 149 IL--PDGSVIILGGKGANTVEYY-PPRNGAVSF-------------P----FLADVEDKQMDNLYPYVHLLPNGHLFIFA 208 (517)
Q Consensus 149 ~L--~dG~v~vvGG~~~~~~E~y-P~~~~w~~~-------------~----~l~~t~~~~~~~~yp~~~~~~~G~iyv~G 208 (517)
.. ++++.++.|+.+ .++.+| ......... + .+... ..........+.+++++++.|
T Consensus 211 ~~~~~~~~~l~s~s~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~l~~~ 286 (464)
T 3v7d_B 211 IVEYKNIKYIVTGSRD-NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV---LRGHMASVRTVSGHGNIVVSG 286 (464)
T ss_dssp EEESSSCEEEEEEETT-SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE---ECCCSSCEEEEEEETTEEEEE
T ss_pred EecCCCCCEEEEEcCC-CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE---ccCccceEEEEcCCCCEEEEE
Confidence 33 577888888765 356666 322111000 0 00000 001112233455688888888
Q ss_pred C--CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEec
Q 044265 209 N--DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIAT 286 (517)
Q Consensus 209 g--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~ 286 (517)
+ ..+.+||..+.+-...+. +. ... -.++.+. .+++.+++|+.+. .+..+|+.
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~---~~-~~~---v~~~~~~-----~~~~~l~sg~~dg--------------~i~vwd~~ 340 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILS---GH-TDR---IYSTIYD-----HERKRCISASMDT--------------TIRIWDLE 340 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEEC---CC-SSC---EEEEEEE-----TTTTEEEEEETTS--------------CEEEEETT
T ss_pred eCCCeEEEEECCCCcEEEEec---CC-CCC---EEEEEEc-----CCCCEEEEEeCCC--------------cEEEEECC
Confidence 6 468899999887654432 11 110 1122222 1677888887652 12334443
Q ss_pred CCCCCceec-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccce
Q 044265 287 SADPTWEME-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHST 365 (517)
Q Consensus 287 ~~~~~W~~~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~ 365 (517)
. .+.. .+........++. .+++.+++|+.+ | .+.+||..+.. ..++. ..... ...
T Consensus 341 ~----~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~d-g------------~v~vwd~~~~~-~~~~~----~~~~~-~~~ 396 (464)
T 3v7d_B 341 N----GELMYTLQGHTALVGLLR-LSDKFLVSAAAD-G------------SIRGWDANDYS-RKFSY----HHTNL-SAI 396 (464)
T ss_dssp T----TEEEEEECCCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTCC-EEEEE----ECTTC-CCE
T ss_pred C----CcEEEEEeCCCCcEEEEE-EcCCEEEEEeCC-C------------cEEEEECCCCc-eeeee----cCCCC-ccE
Confidence 1 1111 1211112223344 368888888765 2 36899998761 11211 11111 123
Q ss_pred eeecCCCcEEEecC
Q 044265 366 ANLLPDGRVLIAGS 379 (517)
Q Consensus 366 a~ll~dG~V~v~GG 379 (517)
..+.+||+++++|+
T Consensus 397 ~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 397 TTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEECSSEEEEEE
T ss_pred EEEEeCCCEEEEec
Confidence 45678999999987
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.35 E-value=0.0077 Score=58.94 Aligned_cols=145 Identities=11% Similarity=0.087 Sum_probs=75.0
Q ss_pred eEEEEECCCCCeEEccc-cCCCcccceeecCC---CcEEEecCCCCCCCeEEEecCCCCCCCCceEecc--CccccCcCc
Q 044265 70 HSAILDLQTNQIRPLMI-LTDTWCSSGQILAD---GTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELD--DVELVNGRW 143 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~d---G~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~--~~~m~~~R~ 143 (517)
.+.+||..+++...... .+........+.++ |+++++|+.+ ..+.+||.... ...-.... ......-.|
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLEAP--EMPVYSVKGHKEIINAIDG 119 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTTSC--SSCSEEECCCSSCEEEEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCCCC--CccEEEEEecccceEEEee
Confidence 57899999988765543 33333344455666 6899998864 57999998732 10111110 000000011
Q ss_pred cceeEEcCCCcEEEEcCCCCCceEEe-CCCCC--ceeccchhhccccccCCCCceEE---EccCCcEEEEECC--ceEEE
Q 044265 144 YGTDQILPDGSVIILGGKGANTVEYY-PPRNG--AVSFPFLADVEDKQMDNLYPYVH---LLPNGHLFIFAND--KAVMY 215 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~--w~~~~~l~~t~~~~~~~~yp~~~---~~~~G~iyv~Gg~--~~~~y 215 (517)
.+..+.-++++.++.|+.+ ..+.+| ..... .......... .....+...+ ..+++++++.|+. .+.+|
T Consensus 120 ~~~~~~s~~~~~l~~~~~d-~~i~vwd~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 195 (357)
T 3i2n_A 120 IGGLGIGEGAPEIVTGSRD-GTVKVWDPRQKDDPVANMEPVQGE---NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLF 195 (357)
T ss_dssp ESGGGCC-CCCEEEEEETT-SCEEEECTTSCSSCSEEECCCTTS---CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEE
T ss_pred ccccccCCCccEEEEEeCC-CeEEEEeCCCCCCcceeccccCCC---CCCceEEEEEEeccCCCCCEEEEEccCCeEEEE
Confidence 1111223688888888765 457777 44322 1111110000 0000010011 2378998888864 68899
Q ss_pred eCCCCeEE
Q 044265 216 DYETNKIA 223 (517)
Q Consensus 216 dp~t~~w~ 223 (517)
|..+.+-.
T Consensus 196 d~~~~~~~ 203 (357)
T 3i2n_A 196 DLRNMALR 203 (357)
T ss_dssp ETTTTEEE
T ss_pred ECccCcee
Confidence 99988754
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.35 E-value=0.047 Score=55.09 Aligned_cols=214 Identities=13% Similarity=0.075 Sum_probs=112.7
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+++.......+...... +..+++++++|+.+ ..+.+||... ..-.. ..+. ....-.+++
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d---g~i~i~d~~~----~~~~~---~~~~~~~~~v~~~~ 224 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARVGC--LSWNRHVLSSGSRS---GAIHHHDVRI----ANHQI---GTLQGHSSEVCGLA 224 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEE--EEEETTEEEEEETT---SEEEEEETTS----SSCEE---EEEECCSSCEEEEE
T ss_pred eEEEEECcCCeEEEEecCCCCceEE--EEECCCEEEEEcCC---CCEEEEeccc----Cccee---eEEcCCCCCeeEEE
Confidence 5788998887755433333332222 23378899998864 6899999872 11111 1122 222344566
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCC-cEEEEEC----CceEEEeCCCCeE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNG-HLFIFAN----DKAVMYDYETNKI 222 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G-~iyv~Gg----~~~~~ydp~t~~w 222 (517)
..++|+.+++|+.+ ..+.+| ..+..-.. . +... ...-..+...++| .+++.|+ ..+.+||..+++.
T Consensus 225 ~~~~~~~l~s~~~d-~~v~iwd~~~~~~~~-~-~~~~-----~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 225 WRSDGLQLASGGND-NVVQIWDARSSIPKF-T-KTNH-----NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp ECTTSSEEEEEETT-SCEEEEETTCSSEEE-E-ECCC-----SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred EcCCCCEEEEEeCC-CeEEEccCCCCCccE-E-ecCC-----cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 77799999998865 457777 43322210 0 0000 0111234555654 6777764 4688999998876
Q ss_pred EEecCCCCCCCCCCCCCCceeeeecccCccccEEEEE-cCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-C--CC
Q 044265 223 AREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVC-GGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-D--MP 298 (517)
Q Consensus 223 ~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~-GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~--m~ 298 (517)
...+. ..... ......| +++.+++ +|...+ .+..+|.. ....... . -.
T Consensus 297 ~~~~~---~~~~v----~~~~~s~------~~~~l~~~~g~~dg-------------~i~v~~~~--~~~~~~~~~~~~h 348 (401)
T 4aez_A 297 VNTVD---AGSQV----TSLIWSP------HSKEIMSTHGFPDN-------------NLSIWSYS--SSGLTKQVDIPAH 348 (401)
T ss_dssp EEEEE---CSSCE----EEEEECS------SSSEEEEEECTTTC-------------EEEEEEEE--TTEEEEEEEEECC
T ss_pred EEEEe---CCCcE----EEEEECC------CCCeEEEEeecCCC-------------cEEEEecC--CccceeEEEecCC
Confidence 54432 11010 1122222 4555554 343212 23345544 2222221 1 12
Q ss_pred cceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCC
Q 044265 299 FGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQP 345 (517)
Q Consensus 299 ~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~ 345 (517)
..+.... ...+||+.+++||.+ | .+.+||..+.
T Consensus 349 ~~~v~~~-~~s~dg~~l~s~~~d-g------------~i~iw~~~~~ 381 (401)
T 4aez_A 349 DTRVLYS-ALSPDGRILSTAASD-E------------NLKFWRVYDG 381 (401)
T ss_dssp SSCCCEE-EECTTSSEEEEECTT-S------------EEEEEECCC-
T ss_pred CCCEEEE-EECCCCCEEEEEeCC-C------------cEEEEECCCC
Confidence 2333333 456899999998875 3 3678988776
No 102
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.33 E-value=0.11 Score=49.46 Aligned_cols=184 Identities=15% Similarity=0.138 Sum_probs=94.7
Q ss_pred eEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEcccc---C-C-Ccccceee-
Q 044265 24 MHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMIL---T-D-TWCSSGQI- 97 (517)
Q Consensus 24 ~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~---~-~-~~c~~~~~- 97 (517)
...++-++|++|+.+..+ + .+.+||+..+....+... . . ....+.++
T Consensus 33 ~~v~~~~~g~l~v~~~~~----------~-----------------~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~ 85 (286)
T 1q7f_A 33 SGVAVNAQNDIIVADTNN----------H-----------------RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVV 85 (286)
T ss_dssp EEEEECTTCCEEEEEGGG----------T-----------------EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEE
T ss_pred ceEEECCCCCEEEEECCC----------C-----------------EEEEECCCCcEEEEecccCCCcccccCceEEEEE
Confidence 344555789988876422 1 366788875444443321 1 1 11223333
Q ss_pred cCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCce
Q 044265 98 LADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAV 176 (517)
Q Consensus 98 l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~ 176 (517)
-.+|++|++.... ...+.+||+. ...-... .......-.++++-++|++|+....+ ..+.+| +......
T Consensus 86 ~~~g~l~v~~~~~--~~~i~~~d~~----g~~~~~~---~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~g~~~~ 155 (286)
T 1q7f_A 86 RNSGDIIVTERSP--THQIQIYNQY----GQFVRKF---GATILQHPRGVTVDNKGRIIVVECKV-MRVIIFDQNGNVLH 155 (286)
T ss_dssp TTTTEEEEEECGG--GCEEEEECTT----SCEEEEE---CTTTCSCEEEEEECTTSCEEEEETTT-TEEEEECTTSCEEE
T ss_pred cCCCeEEEEcCCC--CCEEEEECCC----CcEEEEe---cCccCCCceEEEEeCCCCEEEEECCC-CEEEEEcCCCCEEE
Confidence 3689999987421 2579999965 2222222 11111223456677899998875432 356666 4322111
Q ss_pred eccchhhccccccCCCCc-eEEEccCCcEEEEE--CCceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccc
Q 044265 177 SFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFA--NDKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFAT 253 (517)
Q Consensus 177 ~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~G--g~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~ 253 (517)
...... ....| ..++-++|+||+.. ...+.+||+...... .+.. .+ ....| ..+.+. .+
T Consensus 156 ~~~~~~-------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~g-~~~~p---~~i~~d-----~~ 217 (286)
T 1q7f_A 156 KFGCSK-------HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLR-QIGG-EG-ITNYP---IGVGIN-----SN 217 (286)
T ss_dssp EEECTT-------TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEE-EESC-TT-TSCSE---EEEEEC-----TT
T ss_pred EeCCCC-------ccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEE-EEcc-CC-ccCCC---cEEEEC-----CC
Confidence 111000 00123 24455789999986 457899998665433 3421 11 11222 222221 26
Q ss_pred cEEEEEcCC
Q 044265 254 AVIVVCGGA 262 (517)
Q Consensus 254 gkI~v~GG~ 262 (517)
++||++...
T Consensus 218 G~l~v~~~~ 226 (286)
T 1q7f_A 218 GEILIADNH 226 (286)
T ss_dssp CCEEEEECS
T ss_pred CCEEEEeCC
Confidence 889988754
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.0042 Score=69.07 Aligned_cols=240 Identities=16% Similarity=0.061 Sum_probs=122.7
Q ss_pred eeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC-ccceeEEcCC--CcEEEEcCCCCCceEEe-C
Q 044265 95 GQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR-WYGTDQILPD--GSVIILGGKGANTVEYY-P 170 (517)
Q Consensus 95 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R-~~~s~~~L~d--G~v~vvGG~~~~~~E~y-P 170 (517)
.++.++|+++++||.+ ..+.+||.. ..++... ..+...+ .-.+++..++ |+.++.|+.+ ..+.+| .
T Consensus 15 l~~s~dg~~latg~~d---g~I~vwd~~----~~~~~~~--~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-g~I~vwd~ 84 (753)
T 3jro_A 15 AVLDYYGKRLATCSSD---KTIKIFEVE----GETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYD-GKVLIWKE 84 (753)
T ss_dssp ECCCSSSCCEEEEETT---TEEEEEEEE----TTEEEEE--EEECCCSSCEEEEEECCTTSCSEEEEEETT-SCEEEEEE
T ss_pred EEECCCCCeEEEEECC---CcEEEEecC----CCCCccc--eeccCCcCceEEEEecCCCCCCEEEEEeCC-CeEEEEEC
Confidence 3455789999999864 689999987 4566554 3343222 2334445456 8898888875 457777 4
Q ss_pred CCCCceeccchhhccccccCCCCceEEEccC--CcEEEEECC--ceEEEeCCCCeEEEecCCCCCCCCCCCCCCcee-ee
Q 044265 171 PRNGAVSFPFLADVEDKQMDNLYPYVHLLPN--GHLFIFAND--KAVMYDYETNKIAREYPPLDGGPRNYPSAGSSA-ML 245 (517)
Q Consensus 171 ~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~--G~iyv~Gg~--~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v-~l 245 (517)
.+..+.....+... . ..-..+...++ |+++++|+. .+.+||..++.-.... .+... .. . -.++ ..
T Consensus 85 ~~~~~~~~~~~~~h----~-~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-~~~~~-~~-~--v~~l~~~ 154 (753)
T 3jro_A 85 ENGRWSQIAVHAVH----S-ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDAH-AI-G--VNSASWA 154 (753)
T ss_dssp ETTEEEEEEEECCC----S-SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-EEECC-SS-C--EEEEEEC
T ss_pred CCCcccccccccCC----C-CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-EeecC-CC-c--eEEEEec
Confidence 44443321111100 0 00112444567 888888874 5788998776211000 00000 00 0 0111 11
Q ss_pred ecc-------cCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCC--cceeeeeeEEecC---C
Q 044265 246 ALE-------GDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMP--FGRIMGDMVMLPT---G 312 (517)
Q Consensus 246 ~~~-------~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~--~~R~~~~~v~lpd---G 312 (517)
|.. ....+++++++|+.+. .+..+|+......+... .+. ..... +...-|+ |
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg--------------~I~iwd~~~~~~~~~~~~~~~~h~~~V~-~l~~sp~~~~~ 219 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADN--------------LVKIWKYNSDAQTYVLESTLEGHSDWVR-DVAWSPTVLLR 219 (753)
T ss_dssp CCC---------CGGGCCEEEEETTS--------------CEEEEEEETTTTEEEEEEEECCCSSCEE-EEEECCCCSSS
T ss_pred CcccccccccccCCCCCEEEEEECCC--------------eEEEEeccCCcccceeeeeecCCCCcEE-EEEeccCCCCC
Confidence 100 0001467788887652 23456655433344432 222 22233 2245578 8
Q ss_pred cEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 313 DVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 313 ~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
+++++||.+ | .+.+||..+.....-..+.........-......|||+.+++||.++
T Consensus 220 ~~l~s~s~D-g------------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 220 SYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp EEEEEEESS-S------------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS
T ss_pred CEEEEEecC-C------------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC
Confidence 999998865 3 36899988762211111111111111111234569999999998754
No 104
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.31 E-value=0.035 Score=55.32 Aligned_cols=144 Identities=9% Similarity=-0.067 Sum_probs=76.3
Q ss_pred eEEEEECCCCC-------eEEccccCCCcccceeecCC----C---cEEEecCCCCCCCeEEEecCCCCCCCCc------
Q 044265 70 HSAILDLQTNQ-------IRPLMILTDTWCSSGQILAD----G---TVLQTGGDLDGYKKIRKFSPCEANGLCD------ 129 (517)
Q Consensus 70 ~~~~yDp~t~~-------w~~l~~~~~~~c~~~~~l~d----G---~l~v~GG~~~g~~~v~~ydp~~~~~t~~------ 129 (517)
.+.+||..+++ ...+. .+........+.++ | +++++|+.+ ..+++||.. +..
T Consensus 37 ~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~----~~~~~~~~~ 108 (397)
T 1sq9_A 37 YLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLFYRIT----REDETKKVI 108 (397)
T ss_dssp EEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEEEEEE----ECTTTCCEE
T ss_pred EEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEcCC---CCEEEEEcc----CCccccccc
Confidence 46788887776 22222 23333344556677 8 999998864 578999987 333
Q ss_pred eEeccCccccC---cCccceeEEc----CCCcE-EEEcCCCCCceEEe-CCC------CC---ceeccchhh---ccccc
Q 044265 130 WVELDDVELVN---GRWYGTDQIL----PDGSV-IILGGKGANTVEYY-PPR------NG---AVSFPFLAD---VEDKQ 188 (517)
Q Consensus 130 W~~~~~~~m~~---~R~~~s~~~L----~dG~v-~vvGG~~~~~~E~y-P~~------~~---w~~~~~l~~---t~~~~ 188 (517)
+... ..... ...-.+++.. ++++. +++|+.+ ..+.+| ... .. |.....+.. ... .
T Consensus 109 ~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 184 (397)
T 1sq9_A 109 FEKL--DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM-T 184 (397)
T ss_dssp EEEE--CCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSS-S
T ss_pred ceee--cccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-CcEEEEeCCccccccccceeeccCcceeeeeecccc-C
Confidence 5444 11110 1333455666 78998 8888765 356666 222 11 110001100 000 0
Q ss_pred cCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEec
Q 044265 189 MDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREY 226 (517)
Q Consensus 189 ~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~ 226 (517)
....-..+...++| ++++|+ ..+.+||..+.+....+
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 01111235566788 777776 46889999988766444
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.05 Score=53.56 Aligned_cols=132 Identities=14% Similarity=0.085 Sum_probs=75.8
Q ss_pred EEECCCCC-eEEccccCCCcccceeecC--CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 73 ILDLQTNQ-IRPLMILTDTWCSSGQILA--DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 73 ~yDp~t~~-w~~l~~~~~~~c~~~~~l~--dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
+||..+++ .......+........+.+ +|+++++|+.+ ..+++||.. +.+-... ..........+++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d---g~i~~wd~~----~~~~~~~--~~~~~~~~i~~~~~ 178 (343)
T 3lrv_A 108 ILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR---GTIGFQSYE----DDSQYIV--HSAKSDVEYSSGVL 178 (343)
T ss_dssp EEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT---CCEEEEESS----SSCEEEE--ECCCSSCCCCEEEE
T ss_pred EeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC---CcEEEEECC----CCcEEEE--EecCCCCceEEEEE
Confidence 34555655 3333323333233345566 89999999864 679999987 3433322 11222333556777
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCce--eccchhhccccccCCCCceEEEccCCcEEEEEC-CceEEEeCCCCe
Q 044265 150 LPDGSVIILGGKGANTVEYY-PPRNGAV--SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-DKAVMYDYETNK 221 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y-P~~~~w~--~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-~~~~~ydp~t~~ 221 (517)
-+||++++.|+.+ ..+.+| ..+.... .... . +. ..-..+...++|+.++.|+ ..+.+||.++.+
T Consensus 179 ~pdg~~lasg~~d-g~i~iwd~~~~~~~~~~~~~---~---h~-~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 179 HKDSLLLALYSPD-GILDVYNLSSPDQASSRFPV---D---EE-AKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp CTTSCEEEEECTT-SCEEEEESSCTTSCCEECCC---C---TT-SCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCCCCEEEEEcCC-CEEEEEECCCCCCCccEEec---c---CC-CCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 8899999998865 467888 4443221 1111 0 00 0111344567998887775 468899998764
No 106
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.29 E-value=0.061 Score=50.43 Aligned_cols=259 Identities=13% Similarity=0.037 Sum_probs=126.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCC-CceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGL-CDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t-~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.+||+.+++...+.. +.....+..+.+||+.+++++. ..+.+||.. + .+.... ............+
T Consensus 23 ~i~~~d~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~----~~~~~~~~--~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQ-TPELFEAPNWSPDGKYLLLNSE----GLLYRLSLA----GDPSPEKV--DTGFATICNNDHG 91 (297)
T ss_dssp EEEEEETTTTEEEEEEE-ESSCCEEEEECTTSSEEEEEET----TEEEEEESS----SCCSCEEC--CCTTCCCBCSCCE
T ss_pred eEEEEeCCCCceeeecc-CCcceEeeEECCCCCEEEEEcC----CeEEEEeCC----CCCCceEe--ccccccccccceE
Confidence 57899999988776543 2333445567889999988763 589999988 5 555444 2222223334567
Q ss_pred EcCCCcEEEEcCCCC-CceEEe---CCCCCceeccchhhccccccCCCCceEEEccCCcEEE-EEC--CceEEE--eCCC
Q 044265 149 ILPDGSVIILGGKGA-NTVEYY---PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFI-FAN--DKAVMY--DYET 219 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~-~~~E~y---P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv-~Gg--~~~~~y--dp~t 219 (517)
..+||+.+++++... ....+| ............ .. .......+||+.++ .+. ....+| |..+
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------~~-~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~ 162 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN--------LP-SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS 162 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS--------SS-EEEEEECTTSSEEEEEEEETTEEEEEEEETTT
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC--------CC-ccceEECCCCCEEEEEECCCCceEEEEEECCC
Confidence 778999888877432 234444 222222211110 00 11235567888555 342 333444 4666
Q ss_pred CeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCCc
Q 044265 220 NKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMPF 299 (517)
Q Consensus 220 ~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~ 299 (517)
++.. .+...+ ... ......| +++.+++.+...+ ...++.+++. ........-..
T Consensus 163 ~~~~-~~~~~~----~~~--~~~~~s~------dg~~l~~~~~~~~-----------~~~i~~~~~~--~~~~~~~~~~~ 216 (297)
T 2ojh_A 163 GVET-RLTHGE----GRN--DGPDYSP------DGRWIYFNSSRTG-----------QMQIWRVRVD--GSSVERITDSA 216 (297)
T ss_dssp CCEE-ECCCSS----SCE--EEEEECT------TSSEEEEEECTTS-----------SCEEEEEETT--SSCEEECCCCS
T ss_pred Ccce-EcccCC----Ccc--ccceECC------CCCEEEEEecCCC-----------CccEEEECCC--CCCcEEEecCC
Confidence 6654 232211 110 1122222 5664444432111 1123333322 22222221111
Q ss_pred ceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCc-cccccceeeecCCCcEEEec
Q 044265 300 GRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTI-PRMYHSTANLLPDGRVLIAG 378 (517)
Q Consensus 300 ~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~-~R~yhs~a~ll~dG~V~v~G 378 (517)
.... ....-|||+.+++++...+.... .......+.+||.++. +...+..... ..... .....|||+.++++
T Consensus 217 ~~~~-~~~~s~dg~~l~~~~~~~~~~~~--~~~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 217 YGDW-FPHPSPSGDKVVFVSYDADVFDH--PRDLDVRVQLMDMDGG---NVETLFDLFGGQGTMN-SPNWSPDGDEFAYV 289 (297)
T ss_dssp EEEE-EEEECTTSSEEEEEEEETTCCSC--CSSEEEEEEEEETTSC---SCEEEEEEEESTTTSC-SCCBCTTSSEEEEE
T ss_pred cccC-CeEECCCCCEEEEEEcCCCCCcc--cccCceEEEEEecCCC---CceeeeccCCCCcccc-cceECCCCCEEEEE
Confidence 2222 22445899988877654211000 0001134788998877 5443322111 11111 23446899988777
Q ss_pred CCC
Q 044265 379 SNP 381 (517)
Q Consensus 379 G~~ 381 (517)
+..
T Consensus 290 ~~~ 292 (297)
T 2ojh_A 290 RYF 292 (297)
T ss_dssp EEC
T ss_pred Eec
Confidence 654
No 107
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.27 E-value=0.0078 Score=59.40 Aligned_cols=113 Identities=13% Similarity=0.145 Sum_probs=68.6
Q ss_pred ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCccceeEEcCCCcEEEEcCCCCCceEEe-CC
Q 044265 94 SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWYGTDQILPDGSVIILGGKGANTVEYY-PP 171 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~ 171 (517)
..++.+||+++++|+.+ ..+++||.. +.+|... ..+.. ...-.+++..++|+.++.|+.+ ..+.+| ..
T Consensus 13 ~~~~s~~~~~l~~~~~d---~~v~i~~~~----~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g~i~vwd~~ 82 (372)
T 1k8k_C 13 CHAWNKDRTQIAICPNN---HEVHIYEKS----GNKWVQV--HELKEHNGQVTGVDWAPDSNRIVTCGTD-RNAYVWTLK 82 (372)
T ss_dssp EEEECTTSSEEEEECSS---SEEEEEEEE----TTEEEEE--EEEECCSSCEEEEEEETTTTEEEEEETT-SCEEEEEEE
T ss_pred EEEECCCCCEEEEEeCC---CEEEEEeCC----CCcEEee--eeecCCCCcccEEEEeCCCCEEEEEcCC-CeEEEEECC
Confidence 34566899999999864 689999988 5666554 34432 2334456677899999998865 456677 43
Q ss_pred CCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCe
Q 044265 172 RNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNK 221 (517)
Q Consensus 172 ~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~ 221 (517)
+.++.....+... ...-..+...++|+.+++|+ ..+.+||..+.+
T Consensus 83 ~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 83 GRTWKPTLVILRI-----NRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp TTEEEEEEECCCC-----SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CCeeeeeEEeecC-----CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 3333211000000 00111344567898888886 357788877654
No 108
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.26 E-value=0.054 Score=53.54 Aligned_cols=141 Identities=11% Similarity=0.098 Sum_probs=68.4
Q ss_pred EEEECCCCCeEEccccC-CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEecc-----Cccc-----cC
Q 044265 72 AILDLQTNQIRPLMILT-DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELD-----DVEL-----VN 140 (517)
Q Consensus 72 ~~yDp~t~~w~~l~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~-----~~~m-----~~ 140 (517)
..+|+.+++.+.+.... .......... ||+.+++.... ...+.+|+.... ....... ...- ..
T Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~--~~~v~~~~~~~~---g~~~~~~~~~~~~g~~~~~~~~~ 153 (361)
T 3scy_A 80 FAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYS--GGSITVFPIGQD---GALLPASDVIEFKGSGPDKERQT 153 (361)
T ss_dssp EEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETT--TTEEEEEEBCTT---SCBCSCSEEEECCCCCSCTTTCS
T ss_pred EEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECC--CCEEEEEEeCCC---CcCcccceeEEccCCCCCccccC
Confidence 34456667777665432 1111222233 77755555443 257888987621 1111110 0000 00
Q ss_pred cCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCC-------ceec---cchhhccccccCCCCc-eEEEccCCc-EEEE
Q 044265 141 GRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNG-------AVSF---PFLADVEDKQMDNLYP-YVHLLPNGH-LFIF 207 (517)
Q Consensus 141 ~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~-------w~~~---~~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~ 207 (517)
...-++++.-+||+.+++.+.....+.+| ....+ .... .... ......| ++.+.+||+ +|+.
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~spdg~~l~v~ 228 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-----VAPGSGPRHLIFNSDGKFAYLI 228 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-----CCTTCCEEEEEECTTSSEEEEE
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-----cCCCCCCeEEEEcCCCCEEEEE
Confidence 11125577888998444444444567777 32222 1100 0000 0011122 355678997 6666
Q ss_pred E--CCceEEEeCCCCeEE
Q 044265 208 A--NDKAVMYDYETNKIA 223 (517)
Q Consensus 208 G--g~~~~~ydp~t~~w~ 223 (517)
. ...+.+||..+++..
T Consensus 229 ~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 229 NEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp ETTTCEEEEEEEETTEEE
T ss_pred cCCCCeEEEEEecCCceE
Confidence 5 356889998877653
No 109
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.24 E-value=0.12 Score=49.92 Aligned_cols=165 Identities=12% Similarity=0.109 Sum_probs=84.7
Q ss_pred eEEEEECCCCCe---EEcc--ccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcc
Q 044265 70 HSAILDLQTNQI---RPLM--ILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWY 144 (517)
Q Consensus 70 ~~~~yDp~t~~w---~~l~--~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~ 144 (517)
.+.+||..+.+. .+.. ..+........+.+||+++++|+.+ ..+++++.. ....... ........
T Consensus 62 ~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d---~~i~~~~~~----~~~~~~~---~~~~~~~~ 131 (340)
T 4aow_A 62 TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD---GTLRLWDLT----TGTTTRR---FVGHTKDV 131 (340)
T ss_dssp CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----TTEEEEE---EECCSSCE
T ss_pred eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc---ccceEEeec----ccceeee---ecCCCCce
Confidence 477888776542 2222 2233444455667899999999875 578888877 3333222 11222333
Q ss_pred ceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccC--CcEEEEEC--CceEEEeCCC
Q 044265 145 GTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPN--GHLFIFAN--DKAVMYDYET 219 (517)
Q Consensus 145 ~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~--G~iyv~Gg--~~~~~ydp~t 219 (517)
......++++.++.|+.+. .+.+| .....-..... ... ..........++ ..+++.++ ..+.+||..+
T Consensus 132 ~~~~~~~~~~~l~s~s~d~-~~~~~d~~~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~ 204 (340)
T 4aow_A 132 LSVAFSSDNRQIVSGSRDK-TIKLWNTLGVCKYTVQD-ESH-----SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 204 (340)
T ss_dssp EEEEECTTSSCEEEEETTS-CEEEECTTSCEEEEECS-SSC-----SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred eEEEEeecCccceeecCCC-eEEEEEeCCCceEEEEe-ccc-----cCcccceEEccCCCCcEEEEEcCCCEEEEEECCC
Confidence 4445566788888887653 45555 22211111100 000 000111222333 34666665 3578999998
Q ss_pred CeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 220 NKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 220 ~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
.+....+ .+. .. + -.++.+. .+++++++|+.+
T Consensus 205 ~~~~~~~---~~h-~~-~--v~~~~~s-----~~~~~l~s~s~D 236 (340)
T 4aow_A 205 CKLKTNH---IGH-TG-Y--LNTVTVS-----PDGSLCASGGKD 236 (340)
T ss_dssp TEEEEEE---CCC-SS-C--EEEEEEC-----TTSSEEEEEETT
T ss_pred CceeeEe---cCC-CC-c--EEEEEEC-----CCCCEEEEEeCC
Confidence 8766433 111 11 0 0122221 168888988876
No 110
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.24 E-value=0.079 Score=51.60 Aligned_cols=123 Identities=9% Similarity=-0.017 Sum_probs=62.6
Q ss_pred eeecCCCcEEEecCCCC----CCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCc-EEEEcCCCCCceEEe
Q 044265 95 GQILADGTVLQTGGDLD----GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGS-VIILGGKGANTVEYY 169 (517)
Q Consensus 95 ~~~l~dG~l~v~GG~~~----g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~-v~vvGG~~~~~~E~y 169 (517)
.++.+||+.+.+..... ....+.+||+. +.+.... ......-...+.-+||+ +|+.+. ....+.+|
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~----~~~~~~~----~~~~~~~~~~~~s~dg~~l~v~~~-~~~~v~~~ 116 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPV----TLEVTQA----IHNDLKPFGATINNTTQTLWFGNT-VNSAVTAI 116 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTT----TCCEEEE----EEESSCCCSEEEETTTTEEEEEET-TTTEEEEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCC----CCeEEEE----EecCCCcceEEECCCCCEEEEEec-CCCEEEEE
Confidence 34556775444433221 13579999998 4443322 22222234566777888 555554 33467777
Q ss_pred -CCCCCce-eccchhhcccc-ccCCCCc-eEEEccCCc-EEEEE---CCceEEEeCCCCeEEEecC
Q 044265 170 -PPRNGAV-SFPFLADVEDK-QMDNLYP-YVHLLPNGH-LFIFA---NDKAVMYDYETNKIAREYP 227 (517)
Q Consensus 170 -P~~~~w~-~~~~l~~t~~~-~~~~~yp-~~~~~~~G~-iyv~G---g~~~~~ydp~t~~w~~~~p 227 (517)
+.+.+.. ..+. ...... ......+ .+.+.++|+ +|+.+ ...+.+||+.+.+....++
T Consensus 117 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 117 DAKTGEVKGRLVL-DDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp ETTTCCEEEEEES-CCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred eCCCCeeEEEEec-CCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 6554432 1111 000000 0000112 244557876 66665 2458899999987765443
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.22 E-value=0.028 Score=53.96 Aligned_cols=133 Identities=8% Similarity=0.073 Sum_probs=74.7
Q ss_pred eEEEEECCCCCeEEcccc--CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMIL--TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||..+++...+-.. +.....+..+.++|+.+++|+.+ ..+++||.. +.+-... +........
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~----~~~~~~~----~~~h~~~~~- 113 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ----QQKRLRN----MTSHSARVG- 113 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETT----TTEEEEE----EECCSSCEE-
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecC----CceeEEE----ecCccceEE-
Confidence 478999999887665432 33344456678899999999875 689999987 4433221 221111122
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCe
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNK 221 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~ 221 (517)
+.-.++++++.|+.+. ....+ .......... +... ..........++|+.++.++. .+.+||..+++
T Consensus 114 ~~~~~~~~l~s~~~~~-~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 114 SLSWNSYILSSGSRSG-HIHHHDVRVAEHHVAT-LSGH-----SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EEEEETTEEEEEETTS-EEEEEETTSSSCEEEE-EECC-----SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred EeecCCCEEEEEecCC-ceEeeecCCCceeEEE-EcCc-----cCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 2233678888777553 23333 2221111110 1000 011112444568888888764 57899988654
No 112
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.22 E-value=0.049 Score=53.16 Aligned_cols=91 Identities=11% Similarity=-0.028 Sum_probs=58.1
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~ 147 (517)
.+.+||..+++-......+........+.+ +++++++|+.+ ..+++||.. +.+-... -..+ .....-.++
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~----~~~~~~~-~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQ----TDTLVAI-FGGVEGHRDEVLSA 167 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETT----TTEEEEE-ECSTTSCSSCEEEE
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEee----cCeEEEE-ecccccccCceeEE
Confidence 477899888775543334444455556677 89999999874 579999987 3333221 0111 223334556
Q ss_pred EEcCCCcEEEEcCCCCCceEEe
Q 044265 148 QILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y 169 (517)
+..++|+.++.|+.+ ..+.+|
T Consensus 168 ~~~~~~~~l~~~~~d-g~i~i~ 188 (366)
T 3k26_A 168 DYDLLGEKIMSCGMD-HSLKLW 188 (366)
T ss_dssp EECTTSSEEEEEETT-SCEEEE
T ss_pred EECCCCCEEEEecCC-CCEEEE
Confidence 667889999988875 356666
No 113
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.21 E-value=0.074 Score=51.91 Aligned_cols=144 Identities=13% Similarity=0.175 Sum_probs=77.7
Q ss_pred CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCCCce
Q 044265 88 TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGANTV 166 (517)
Q Consensus 88 ~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~~~~ 166 (517)
|........+.+||+.+++|+.+ ..+++||.. +.+-.. .+. ....-.+++..++++.++.|+.+ .++
T Consensus 64 h~~~v~~~~~s~dg~~l~s~s~D---~~v~~wd~~----~~~~~~----~~~~h~~~v~~~~~~~~~~~l~s~s~D-~~i 131 (319)
T 3frx_A 64 HSHIVQDCTLTADGAYALSASWD---KTLRLWDVA----TGETYQ----RFVGHKSDVMSVDIDKKASMIISGSRD-KTI 131 (319)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT---SEEEEEETT----TTEEEE----EEECCSSCEEEEEECTTSCEEEEEETT-SCE
T ss_pred CcccEEEEEECCCCCEEEEEeCC---CEEEEEECC----CCCeeE----EEccCCCcEEEEEEcCCCCEEEEEeCC-CeE
Confidence 34444445677899999999875 689999987 333221 122 12223455667789998888765 457
Q ss_pred EEe-CCCCCceeccchhhccccccCCCCceEEEcc------CCcEEEEEC--CceEEEeCCCCeEEEecCCCCCCCCCCC
Q 044265 167 EYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLP------NGHLFIFAN--DKAVMYDYETNKIAREYPPLDGGPRNYP 237 (517)
Q Consensus 167 E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~------~G~iyv~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~ 237 (517)
.+| .....-... ... ...-..+...+ ++.+++.|+ ..+.+||..+.+....+ .+. ...-
T Consensus 132 ~vwd~~~~~~~~~---~~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~---~~h-~~~v 199 (319)
T 3frx_A 132 KVWTIKGQCLATL---LGH-----NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF---IGH-NSNI 199 (319)
T ss_dssp EEEETTSCEEEEE---CCC-----SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE---CCC-CSCE
T ss_pred EEEECCCCeEEEE---ecc-----CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee---cCC-CCcE
Confidence 777 332111110 000 00001122233 445666665 45889999887655333 211 1100
Q ss_pred CCCceeeeecccCccccEEEEEcCCc
Q 044265 238 SAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 238 ~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
-+....| +++.++.|+.+
T Consensus 200 --~~~~~sp------~g~~l~s~~~d 217 (319)
T 3frx_A 200 --NTLTASP------DGTLIASAGKD 217 (319)
T ss_dssp --EEEEECT------TSSEEEEEETT
T ss_pred --EEEEEcC------CCCEEEEEeCC
Confidence 0122222 78889998876
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.21 E-value=0.055 Score=52.50 Aligned_cols=88 Identities=7% Similarity=-0.061 Sum_probs=53.0
Q ss_pred eEEEEECCCCC----eEEccccCCCcccceeecCCCc-EEEecCCCCCCCeEEEecC-CCCCCCCceEeccCccccCcCc
Q 044265 70 HSAILDLQTNQ----IRPLMILTDTWCSSGQILADGT-VLQTGGDLDGYKKIRKFSP-CEANGLCDWVELDDVELVNGRW 143 (517)
Q Consensus 70 ~~~~yDp~t~~----w~~l~~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp-~~~~~t~~W~~~~~~~m~~~R~ 143 (517)
.+.+||..+++ ...+. .+........+.++++ ++++|+.+ ..+.+||. . +...... ........
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~~wd~~~----~~~~~~~--~~~~~~~~ 103 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ---GEILKVDLIG----SPSFQAL--TNNEANLG 103 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT---SCEEEECSSS----SSSEEEC--BSCCCCSC
T ss_pred eEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC---CeEEEEEecc----CCceEec--cccCCCCc
Confidence 46788877766 33322 3333344455677999 88998864 57999998 7 4444443 11112223
Q ss_pred cceeEEcCCCcEEEEcCCCCCceEEe
Q 044265 144 YGTDQILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~~~~~E~y 169 (517)
-.+++..+ ++.++.|+.+ ..+.+|
T Consensus 104 v~~l~~~~-~~~l~s~~~d-~~i~iw 127 (342)
T 1yfq_A 104 ICRICKYG-DDKLIAASWD-GLIEVI 127 (342)
T ss_dssp EEEEEEET-TTEEEEEETT-SEEEEE
T ss_pred eEEEEeCC-CCEEEEEcCC-CeEEEE
Confidence 34455666 7888888765 356666
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.20 E-value=0.27 Score=52.23 Aligned_cols=280 Identities=10% Similarity=0.061 Sum_probs=140.0
Q ss_pred ceEEEEEC--CCCCeEE-ccccCCCcccceeecC----CCcEEEecCCCCCCCeEEEecCCCCCCCCceEe-ccCcccc-
Q 044265 69 AHSAILDL--QTNQIRP-LMILTDTWCSSGQILA----DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVE-LDDVELV- 139 (517)
Q Consensus 69 ~~~~~yDp--~t~~w~~-l~~~~~~~c~~~~~l~----dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~-~~~~~m~- 139 (517)
..+.+||+ .+.+... +.. .....+.++.+ ||+.+.++.+. ..++.+||.. +.+-.. ++...+.
T Consensus 200 ~~V~v~D~~~~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~----t~~~~~~i~~~g~~~ 271 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGE----TLEPKQIVSTRGMTV 271 (543)
T ss_dssp SEEEEEETTSSSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEE--SSEEEEEETT----TCCEEEEEECCEECS
T ss_pred CeEEEEECcCCCCcEEEEEec--CCCcceEEeCCCcCCCCCEEEEEEcc--CCeEEEEecc----ccccceeecccCccc
Confidence 46889999 6655432 222 22223455667 99988887653 2678999987 333221 1001111
Q ss_pred -------CcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCcEEEEEC-
Q 044265 140 -------NGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN- 209 (517)
Q Consensus 140 -------~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg- 209 (517)
.+| -.+++.-++++.+++.......+.++ ..+.+......+. . ..++ ...+.+||+.+++++
T Consensus 272 ~~~~~~~~~~-v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~------~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 272 DTQTYHPEPR-VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-A------APFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp SSCCEESCCC-EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-C------CSSCCCEEECTTSCEEEEEEG
T ss_pred CccccccCCc-eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-c------CcCccCceECCCCCEEEEEec
Confidence 112 23445556677777666555556666 3322111100010 0 1122 356678998554443
Q ss_pred --CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecC
Q 044265 210 --DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATS 287 (517)
Q Consensus 210 --~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~ 287 (517)
+.+.++|.++++....++. +....+..+.....| ..+++|+.+.... +++..||...
T Consensus 344 ~~~~v~v~D~~tg~l~~~i~~---g~~ph~g~g~~~~~p-----~~g~~~~s~~~~d-------------~~V~v~d~~~ 402 (543)
T 1nir_A 344 NSNKVAVIDSKDRRLSALVDV---GKTPHPGRGANFVHP-----KYGPVWSTSHLGD-------------GSISLIGTDP 402 (543)
T ss_dssp GGTEEEEEETTTTEEEEEEEC---SSSBCCTTCEEEEET-----TTEEEEEEEBSSS-------------SEEEEEECCT
T ss_pred CCCeEEEEECCCCeEEEeecc---CCCCCCCCCcccCCC-----CCccEEEeccCCC-------------ceEEEEEeCC
Confidence 5788999999987654431 111112123332223 1488888875321 2344566442
Q ss_pred C---CCCceec-CCCc--ceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCc-------eeccCC
Q 044265 288 A---DPTWEME-DMPF--GRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGL-------RFMTLN 354 (517)
Q Consensus 288 ~---~~~W~~~-~m~~--~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~-------~W~~~~ 354 (517)
. ...|+.. .++. ..... ...-|||+.+.++... +. ..+.-.++.+||.++.... +|+.+.
T Consensus 403 ~~~~~~~~~~v~~l~~~g~~~~~-v~~~pdg~~l~v~~~~-~~-----~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~ 475 (543)
T 1nir_A 403 KNHPQYAWKKVAELQGQGGGSLF-IKTHPKSSHLYVDTTF-NP-----DARISQSVAVFDLKNLDAKYQVLPIAEWADLG 475 (543)
T ss_dssp TTCTTTBTSEEEEEECSCSCCCC-EECCTTCCEEEECCTT-CS-----SHHHHTCEEEEETTCTTSCCEEECHHHHHCCC
T ss_pred CCCchhcCeEEEEEEcCCCCceE-EEcCCCCCcEEEecCC-CC-----CcccCceEEEEECCCCCCCeEEeechhhcccC
Confidence 1 1238764 4332 22222 2345899888776421 10 0000125899999887321 111111
Q ss_pred CCCccccccceeeecCCCcEEEec--CCCccccccCCCCCCceeeEEEeCCcc
Q 044265 355 PGTIPRMYHSTANLLPDGRVLIAG--SNPHYFYKFNAEFPTELRIEAFSPEYL 405 (517)
Q Consensus 355 ~~~~~R~yhs~a~ll~dG~V~v~G--G~~~~~~~~~~~~~~~~~vE~y~P~yl 405 (517)
-...|..| ..+-+||+-+.+. +... .+..|.+|+...+
T Consensus 476 -~~~~~~~~--~~~~~~g~~~~~s~~~~~~----------~~~~i~v~D~~t~ 515 (543)
T 1nir_A 476 -EGAKRVVQ--PEYNKRGDEVWFSVWNGKN----------DSSALVVVDDKTL 515 (543)
T ss_dssp -SSCCEEEE--EEECSSSSEEEEEEECCTT----------SCCEEEEEETTTT
T ss_pred -CCCCceEe--ccCCCCCCEEEEEeecCCC----------CCCeEEEEECCCc
Confidence 12345555 2457899866644 2111 1346778887775
No 116
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.06 Score=52.48 Aligned_cols=240 Identities=13% Similarity=0.128 Sum_probs=119.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCC--CCCCeEEEecCCCCCCCCceEeccC---ccccC-c--
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDL--DGYKKIRKFSPCEANGLCDWVELDD---VELVN-G-- 141 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~--~g~~~v~~ydp~~~~~t~~W~~~~~---~~m~~-~-- 141 (517)
.+.+||..+++...... +........+.++++.+++++.. .....+.+||.........+..... ..+.. .
T Consensus 97 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred eEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 57899998877654433 33334456677899999988764 1225788898763211222222100 00111 1
Q ss_pred CccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCC
Q 044265 142 RWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYE 218 (517)
Q Consensus 142 R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~ 218 (517)
....+++..++|+.+++|+.+ ..+.+| ..++.-. ...+... ...-..+...++|+.++.++ ..+.+||..
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~-~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKD-GKISKYDVSNNYEY-VDSIDLH-----EKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETT-SEEEEEETTTTTEE-EEEEECC-----SSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cceeEEEEcCCCCEEEEEcCC-CEEEEEECCCCcEe-EEEEecC-----CCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 134455666789998888765 457777 4432111 1111000 01111345567999888886 468899999
Q ss_pred CCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecCCC
Q 044265 219 TNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMEDMP 298 (517)
Q Consensus 219 t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~ 298 (517)
+.+....+.. . ... ......| +++.+++|+.+................+..+|....... ....-.
T Consensus 249 ~~~~~~~~~~-~--~~~----~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~ 314 (369)
T 3zwl_B 249 TLQVLKKYET-D--CPL----NTAVITP------LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI-GRVQGH 314 (369)
T ss_dssp TCCEEEEEEC-S--SCE----EEEEECS------SSSEEEEEECCC-------------CEEEEEETTTCCEE-EEEECC
T ss_pred CCceeeeecC-C--CCc----eeEEecC------CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch-hheecc
Confidence 8876644421 1 011 1222333 677777777652211000000000112334443311000 001111
Q ss_pred cceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCC
Q 044265 299 FGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQP 345 (517)
Q Consensus 299 ~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~ 345 (517)
...... ....|||+++++|+.+ | .+.+||.++.
T Consensus 315 ~~~v~~-~~~s~~~~~l~s~~~d-g------------~v~iw~~~~~ 347 (369)
T 3zwl_B 315 FGPLNT-VAISPQGTSYASGGED-G------------FIRLHHFEKS 347 (369)
T ss_dssp SSCEEE-EEECTTSSEEEEEETT-S------------EEEEEEECHH
T ss_pred cCcEEE-EEECCCCCEEEEEcCC-C------------eEEEEECccc
Confidence 222222 2455899999998865 3 3678887765
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.17 E-value=0.0095 Score=59.41 Aligned_cols=139 Identities=16% Similarity=0.155 Sum_probs=73.1
Q ss_pred EEEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccC-----ccc-cCcCcc
Q 044265 72 AILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDD-----VEL-VNGRWY 144 (517)
Q Consensus 72 ~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~-----~~m-~~~R~~ 144 (517)
.+||..+++-..+...+.....+..+.+ +|+++++|+.+ ..+++||............... ..+ .....-
T Consensus 26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSD---GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp HHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETT---SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred eeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCC---CeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 3455555555544444555555566778 99999999874 5799999873211111111000 000 022233
Q ss_pred ceeEEcC-CCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEcc---CCcEEEEEC--CceEEEe
Q 044265 145 GTDQILP-DGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLP---NGHLFIFAN--DKAVMYD 216 (517)
Q Consensus 145 ~s~~~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~---~G~iyv~Gg--~~~~~yd 216 (517)
.+++..+ ++++++.|+.+ ..+.+| ..+.... .... .. . -......+ ++++++.|+ ..+.+||
T Consensus 103 ~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~-~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFD-KTLKVWDTNTLQTADVFNF-EE-------T-VYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp EEEEECTTCTTCEEEEETT-SEEEEEETTTTEEEEEEEC-SS-------C-EEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred EEEEEccCCCcEEEEEeCC-CeEEEeeCCCCccceeccC-CC-------c-eeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 4555666 67788887755 456777 4432221 1110 00 0 01122333 555777775 4688999
Q ss_pred CCCCeEE
Q 044265 217 YETNKIA 223 (517)
Q Consensus 217 p~t~~w~ 223 (517)
..+.+..
T Consensus 173 ~~~~~~~ 179 (408)
T 4a11_B 173 LKSGSCS 179 (408)
T ss_dssp SSSSCCC
T ss_pred CCCccee
Confidence 9876544
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.018 Score=64.02 Aligned_cols=232 Identities=13% Similarity=0.167 Sum_probs=122.6
Q ss_pred eEEEEECCCCCeEEcccc--CCCcccceeecCC--CcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCcc
Q 044265 70 HSAILDLQTNQIRPLMIL--TDTWCSSGQILAD--GTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWY 144 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~d--G~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~ 144 (517)
.+.+||..++++..+... +.....+..+.++ |+.+++|+.+ ..+.+||.. +.+|... ..+. ....-
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~----~~~~~~~--~~~~~h~~~V 102 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE----NGRWSQI--AVHAVHSASV 102 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEE----TTEEEEE--EEECCCSSCE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECC----CCccccc--ccccCCCCCe
Confidence 477888877666655432 3333334445566 8999999874 579999988 6666554 3333 22334
Q ss_pred ceeEEcCC--CcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEcc-------------CCcEEEEE
Q 044265 145 GTDQILPD--GSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLP-------------NGHLFIFA 208 (517)
Q Consensus 145 ~s~~~L~d--G~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~-------------~G~iyv~G 208 (517)
.+++..++ |+++++|+.+ ..+.+| .........-.+... ... -..+...+ +|++++.|
T Consensus 103 ~~v~~sp~~~~~~l~sgs~d-g~I~vwdl~~~~~~~~~~~~~~----~~~-v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 103 NSVQWAPHEYGPLLLVASSD-GKVSVVEFKENGTTSPIIIDAH----AIG-VNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp EEEEECCGGGCSEEEEEETT-SEEEEEECCSSSCCCCEEEECC----SSC-EEEEEECCCC---------CGGGCCEEEE
T ss_pred EEEEECCCCCCCEEEEEeCC-CcEEEEEeecCCCcceeEeecC----CCc-eEEEEecCcccccccccccCCCCCEEEEE
Confidence 45666677 8999998865 356666 332211100000000 000 01122233 57888887
Q ss_pred C--CceEEEeCCCCe--EEEecCCCCCCCCCCCCCCceeeeecccCccc---cEEEEEcCCcCCcccccCCCCCCCCcee
Q 044265 209 N--DKAVMYDYETNK--IAREYPPLDGGPRNYPSAGSSAMLALEGDFAT---AVIVVCGGAQFGAFIQRSTDTPAHGSCG 281 (517)
Q Consensus 209 g--~~~~~ydp~t~~--w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~---gkI~v~GG~~~~~~~~~~~~~~a~~s~~ 281 (517)
+ ..+.+||..++. +. ....+.+. .... -+....| + ++++++||.+. .+.
T Consensus 177 s~dg~I~iwd~~~~~~~~~-~~~~~~~h-~~~V--~~l~~sp------~~~~~~~l~s~s~Dg--------------~I~ 232 (753)
T 3jro_A 177 GADNLVKIWKYNSDAQTYV-LESTLEGH-SDWV--RDVAWSP------TVLLRSYLASVSQDR--------------TCI 232 (753)
T ss_dssp ETTSCEEEEEEETTTTEEE-EEEEECCC-SSCE--EEEEECC------CCSSSEEEEEEESSS--------------CEE
T ss_pred ECCCeEEEEeccCCcccce-eeeeecCC-CCcE--EEEEecc------CCCCCCEEEEEecCC--------------EEE
Confidence 6 357889987652 22 11111211 1100 0112222 4 78999998762 234
Q ss_pred EEEecCCCCCceec--CC-Cc-ceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCC
Q 044265 282 RIIATSADPTWEME--DM-PF-GRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPG 356 (517)
Q Consensus 282 ~id~~~~~~~W~~~--~m-~~-~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~ 356 (517)
.+|+......+... .. .. .... +...-|||+.+++||.+ | .+.+||..++ .+|......
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~~~v~-~l~~spdg~~l~s~s~D-g------------~I~vwd~~~~--~~~~~~~~~ 295 (753)
T 3jro_A 233 IWTQDNEQGPWKKTLLKEEKFPDVLW-RASWSLSGNVLALSGGD-N------------KVTLWKENLE--GKWEPAGEV 295 (753)
T ss_dssp EEEESSSSSCCBCCBSSSSCCSSCCC-CEEECTTTCCEEEECSS-S------------CEECCBCCSS--SCCBCCCCB
T ss_pred EecCCCCCCcceeEEeccCCCCCceE-EEEEcCCCCEEEEEcCC-C------------EEEEEecCCC--CCccccccc
Confidence 56655322223221 11 11 1222 22445899999998875 3 3678887753 267665443
No 119
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.13 E-value=0.019 Score=56.11 Aligned_cols=90 Identities=11% Similarity=0.067 Sum_probs=53.6
Q ss_pred eEEEEECCCCCeEEccc--cCCCcccceeecC--CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCcc
Q 044265 70 HSAILDLQTNQIRPLMI--LTDTWCSSGQILA--DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWY 144 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~--dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~ 144 (517)
.+.+||..+++...+.. .|.......++.+ +|+++++|+.+ ..+++||.. +.+|... ..+.. ...-
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D---~~v~iWd~~----~~~~~~~--~~~~~h~~~V 106 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD---RKVIIWREE----NGTWEKS--HEHAGHDSSV 106 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT---SCEEEECCS----SSCCCEE--EEECCCSSCC
T ss_pred eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC---CEEEEEECC----CCcceEE--EEccCCCCce
Confidence 47789987765433322 2332222233333 48899999875 689999998 5566543 22322 2233
Q ss_pred ceeEEcCC--CcEEEEcCCCCCceEEe
Q 044265 145 GTDQILPD--GSVIILGGKGANTVEYY 169 (517)
Q Consensus 145 ~s~~~L~d--G~v~vvGG~~~~~~E~y 169 (517)
.+++..++ |++++.|+.+ .++.+|
T Consensus 107 ~~v~~~p~~~g~~lasgs~D-~~i~lw 132 (316)
T 3bg1_A 107 NSVCWAPHDYGLILACGSSD-GAISLL 132 (316)
T ss_dssp CEEEECCTTTCSCEEEECSS-SCEEEE
T ss_pred EEEEECCCCCCcEEEEEcCC-CCEEEE
Confidence 45566666 7888888866 456666
No 120
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.12 E-value=0.023 Score=55.46 Aligned_cols=114 Identities=12% Similarity=0.030 Sum_probs=65.3
Q ss_pred eeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-CccceeEEcC--CCcEEEEcCCCCCceEEe-C
Q 044265 95 GQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWYGTDQILP--DGSVIILGGKGANTVEYY-P 170 (517)
Q Consensus 95 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~~s~~~L~--dG~v~vvGG~~~~~~E~y-P 170 (517)
.++.+||+++++|+.+ ..+++||.. +.+.... ..+... ..-.+++..+ +|++++.|+.+ .++.+| .
T Consensus 19 v~~s~~g~~lasgs~D---~~v~lwd~~----~~~~~~~--~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-~~v~iWd~ 88 (316)
T 3bg1_A 19 AQMDYYGTRLATCSSD---RSVKIFDVR----NGGQILI--ADLRGHEGPVWQVAWAHPMYGNILASCSYD-RKVIIWRE 88 (316)
T ss_dssp EEECGGGCEEEEEETT---TEEEEEEEE----TTEEEEE--EEEECCSSCEEEEEECCGGGSSCEEEEETT-SCEEEECC
T ss_pred eeEcCCCCEEEEEeCC---CeEEEEEec----CCCcEEE--EEEcCCCccEEEEEeCCCCCCCEEEEEECC-CEEEEEEC
Confidence 4456789999999875 689999987 4433222 223322 2222334333 47888888765 467888 5
Q ss_pred CCCCceeccchhhccccccCCCCceEEEccC--CcEEEEEC--CceEEEeCCCC-eEE
Q 044265 171 PRNGAVSFPFLADVEDKQMDNLYPYVHLLPN--GHLFIFAN--DKAVMYDYETN-KIA 223 (517)
Q Consensus 171 ~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~--G~iyv~Gg--~~~~~ydp~t~-~w~ 223 (517)
.+..|.....+... ... -..+...++ |++++.|+ ..+.+||..++ .|.
T Consensus 89 ~~~~~~~~~~~~~h----~~~-V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 89 ENGTWEKSHEHAGH----DSS-VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp SSSCCCEEEEECCC----SSC-CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred CCCcceEEEEccCC----CCc-eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 55444321111100 001 113445566 78888887 45788998765 464
No 121
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.11 E-value=0.027 Score=54.43 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=62.4
Q ss_pred ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-CccceeEEcC--CCcEEEEcCCCCCceEEe-
Q 044265 94 SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWYGTDQILP--DGSVIILGGKGANTVEYY- 169 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~~s~~~L~--dG~v~vvGG~~~~~~E~y- 169 (517)
..++.+||+.+++|+.+ ..+++||.. ..+.... ..+... ..-.+++..+ +|++++.|+.+ .++.+|
T Consensus 14 ~~~~s~~g~~las~s~D---~~v~iw~~~----~~~~~~~--~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-~~v~iWd 83 (297)
T 2pm7_B 14 DAVMDYYGKRMATCSSD---KTIKIFEVE----GETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYD-GKVMIWK 83 (297)
T ss_dssp EEEECTTSSEEEEEETT---SCEEEEEBC----SSCBCCC--EEECCCSSCEEEEEECCGGGCSEEEEEETT-TEEEEEE
T ss_pred EEEECCCCCEEEEEeCC---CEEEEEecC----CCCcEEE--EEEccccCCeEEEEecCCCcCCEEEEEcCC-CEEEEEE
Confidence 34566899999999875 679999986 3322222 223221 2222333333 38888888765 567788
Q ss_pred CCCCCceeccchhhccccccCCCCceEEEccC--CcEEEEEC--CceEEEeCCCC
Q 044265 170 PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPN--GHLFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 170 P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~--G~iyv~Gg--~~~~~ydp~t~ 220 (517)
..+..|.....+... . ..-..+...++ |++++.|+ ..+.+||..++
T Consensus 84 ~~~~~~~~~~~~~~h----~-~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 84 EENGRWSQIAVHAVH----S-ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp BSSSCBCCCEEECCC----S-SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred cCCCceEEEEEeecC----C-CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 554444321111100 0 00112334455 78888876 45788998765
No 122
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.09 E-value=0.036 Score=54.16 Aligned_cols=135 Identities=12% Similarity=0.128 Sum_probs=75.4
Q ss_pred eEEEEECCCCCeE-Ecccc----CCCcccceeecCC----CcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-
Q 044265 70 HSAILDLQTNQIR-PLMIL----TDTWCSSGQILAD----GTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV- 139 (517)
Q Consensus 70 ~~~~yDp~t~~w~-~l~~~----~~~~c~~~~~l~d----G~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~- 139 (517)
.+.+||..+++.. .+... +.......+..++ |+++++|+.+ ..+.+||.. +.+-.. .+.
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---g~i~v~d~~----~~~~~~----~~~~ 113 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR---GIIRIINPI----TMQCIK----HYVG 113 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT---CEEEEECTT----TCCEEE----EEES
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC---CEEEEEEch----hceEee----eecC
Confidence 4677887765533 22211 2222334445566 7799998864 589999987 333221 122
Q ss_pred CcCccceeEEcC-CCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC--CceEE
Q 044265 140 NGRWYGTDQILP-DGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVM 214 (517)
Q Consensus 140 ~~R~~~s~~~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ 214 (517)
....-.+++..+ ++++++.|+.+ ..+.+| ..+.+.. ....+... ...-..+...++|+.++.|+ ..+.+
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~i 187 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVSKD-HALRLWNIQTDTLVAIFGGVEGH-----RDEVLSADYDLLGEKIMSCGMDHSLKL 187 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETT-SCEEEEETTTTEEEEEECSTTSC-----SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcEEEEEECCCCCCEEEEEeCC-CeEEEEEeecCeEEEEecccccc-----cCceeEEEECCCCCEEEEecCCCCEEE
Confidence 223344556667 88998888865 457777 4433221 11000100 00111244457898888886 46889
Q ss_pred EeCCCCe
Q 044265 215 YDYETNK 221 (517)
Q Consensus 215 ydp~t~~ 221 (517)
||..+.+
T Consensus 188 ~d~~~~~ 194 (366)
T 3k26_A 188 WRINSKR 194 (366)
T ss_dssp EESCSHH
T ss_pred EECCCCc
Confidence 9988754
No 123
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.08 E-value=0.049 Score=53.19 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=79.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++-...-..+........+.+++.++++|+.+ ..+++||.. ...-..+ .....+-.++..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~----~~~~~~~----~~h~~~v~~~~~ 156 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK----GQCLATL----LGHNDWVSQVRV 156 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT----SCEEEEE----CCCSSCEEEEEE
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC----CCeEEEE----eccCCcEEEEEE
Confidence 58899999887544333444444455677899999999875 679999986 2222221 111222233344
Q ss_pred cC------CCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCC
Q 044265 150 LP------DGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETN 220 (517)
Q Consensus 150 L~------dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~ 220 (517)
.+ ++..++.|+.+ ..+.+| ....+.. ..+ .. +. ..-..+...++|++++.|+. .+.+||..+.
T Consensus 157 ~~~~~~~~~~~~l~s~~~d-~~i~~wd~~~~~~~-~~~-~~----h~-~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGND-KMVKAWNLNQFQIE-ADF-IG----HN-SNINTLTASPDGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp CCC------CCEEEEEETT-SCEEEEETTTTEEE-EEE-CC----CC-SCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred ccCCCCCCCccEEEEEeCC-CEEEEEECCcchhh-eee-cC----CC-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 44 34466766654 467777 4322111 011 00 00 01113455689999998874 6889999988
Q ss_pred eEEEec
Q 044265 221 KIAREY 226 (517)
Q Consensus 221 ~w~~~~ 226 (517)
+-...+
T Consensus 229 ~~~~~~ 234 (319)
T 3frx_A 229 KAMYTL 234 (319)
T ss_dssp EEEEEE
T ss_pred cEEEEe
Confidence 755433
No 124
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.06 E-value=0.11 Score=57.33 Aligned_cols=164 Identities=15% Similarity=0.176 Sum_probs=93.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~~s~~ 148 (517)
.+.+||..+++.......+.......++.++|..+++|+.+ ..+.+||.. +. |... ..+.. ...-.+++
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~----~~-~~~~--~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWE----NN-WALE--QTFEGHEHFVMCVA 147 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGG----GT-SEEE--EEEECCSSCEEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECC----CC-ceEE--EEEcCCCCcEEEEE
Confidence 57899999888765444444444456677899999988864 689999987 33 3222 12222 22233455
Q ss_pred EcC-CCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEcc--CCcEEEEECC--ceEEEeCCCCe
Q 044265 149 ILP-DGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLP--NGHLFIFAND--KAVMYDYETNK 221 (517)
Q Consensus 149 ~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~--~G~iyv~Gg~--~~~~ydp~t~~ 221 (517)
..+ +++.+++|+.+ .++.+| ....... .... . .......+...+ +|+++++|+. .+.+||..+++
T Consensus 148 ~~p~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~~--~-----~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 148 FNPKDPSTFASGCLD-RTVKVWSLGQSTPNFTLTT--G-----QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp EETTEEEEEEEEETT-SEEEEEETTCSSCSEEEEC--C-----CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred EEcCCCCEEEEEeCC-CeEEEEECCCCcceeEEec--C-----CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 566 78888888765 457777 4332211 1100 0 001112344455 8888888874 58899998887
Q ss_pred EEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 222 IAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 222 w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
....+. .. .... ......| +++++++|+.+
T Consensus 220 ~~~~~~---~~-~~~v--~~~~~~~------~~~~l~~~~~d 249 (814)
T 3mkq_A 220 CVATLE---GH-MSNV--SFAVFHP------TLPIIISGSED 249 (814)
T ss_dssp EEEEEE---CC-SSCE--EEEEECS------SSSEEEEEETT
T ss_pred EEEEEc---CC-CCCE--EEEEEcC------CCCEEEEEeCC
Confidence 554332 11 1100 1122222 67788888765
No 125
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.05 E-value=0.22 Score=47.01 Aligned_cols=131 Identities=12% Similarity=0.088 Sum_probs=72.0
Q ss_pred EEEEECCCCCeEEcccc-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 71 SAILDLQTNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
+..||+. ++++..... ......+.++..+|++|+.... ...+.+||+. .+.... .+. ....-.+.+
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~-----g~~~~~---~~~~~~~~~~~i~ 147 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD-----GKIREY---ELPNKGSYPSFIT 147 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT-----CCEEEE---ECSSTTCCEEEEE
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC-----CCEEEe---cCCCCCCCCceEE
Confidence 5677776 555544322 2222334455678999998643 2578889984 233332 111 122234556
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCce-EEEccCCcEEEEE--CCceEEEeCCCCeEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPY-VHLLPNGHLFIFA--NDKAVMYDYETNKIA 223 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~-~~~~~~G~iyv~G--g~~~~~ydp~t~~w~ 223 (517)
.-++|++|+..- ....+.+| + +.+...... .. ....|. ..+-++|+||+.. +..+.+||+ +++..
T Consensus 148 ~~~~g~l~v~~~-~~~~i~~~~~-~g~~~~~~~-~~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 148 LGSDNALWFTEN-QNNAIGRITE-SGDITEFKI-PT------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp ECTTSCEEEEET-TTTEEEEECT-TCCEEEEEC-SS------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred EcCCCCEEEEeC-CCCEEEEEcC-CCcEEEeeC-CC------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 667899998653 22345666 5 444332111 00 011232 3444689999887 456889999 77665
No 126
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.02 E-value=0.26 Score=47.29 Aligned_cols=139 Identities=11% Similarity=0.126 Sum_probs=74.5
Q ss_pred eEEEEECCCCCeEEccccCCC--cccceeecCCCc-EEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC----cC
Q 044265 70 HSAILDLQTNQIRPLMILTDT--WCSSGQILADGT-VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN----GR 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~----~R 142 (517)
.+.+||+.+++.......... .....++.+||+ +|+.+.. ...+.+||.. +.+-... -.... ..
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~----~~~~~~~--~~~~~~~~~~~ 82 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV----TGETLGR--IDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT----TCCEEEE--EECCBTTEEEE
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC----CCCeEee--EEcCCcccccc
Confidence 477888888765543222221 234556778985 5566543 2679999987 4443221 11111 01
Q ss_pred ccceeEEcCCCcEEEEcCC-----------CCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC
Q 044265 143 WYGTDQILPDGSVIILGGK-----------GANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN 209 (517)
Q Consensus 143 ~~~s~~~L~dG~v~vvGG~-----------~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg 209 (517)
.-..++.-+||+.++++.. ....+.+| ..+.+.. ..+. . .. -..+.+.+||+.+++++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~-----~~-~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---P-----RQ-ITMLAWARDGSKLYGLG 153 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---C-----SS-CCCEEECTTSSCEEEES
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC---C-----CC-cceeEECCCCCEEEEeC
Confidence 2345667778865444421 12456666 4433222 1110 0 00 11245678998444557
Q ss_pred CceEEEeCCCCeEEEec
Q 044265 210 DKAVMYDYETNKIAREY 226 (517)
Q Consensus 210 ~~~~~ydp~t~~w~~~~ 226 (517)
..+.+||..+++....+
T Consensus 154 ~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp SSEEEEETTTTEEEEEE
T ss_pred CeEEEEECCCCcEeeee
Confidence 78999999998766443
No 127
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.94 E-value=0.064 Score=53.46 Aligned_cols=135 Identities=10% Similarity=0.154 Sum_probs=70.2
Q ss_pred eEEEEECCCCCeEEccc----cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-Ccc
Q 044265 70 HSAILDLQTNQIRPLMI----LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWY 144 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~----~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~ 144 (517)
.+.+||..+++-..... .+.....+.++.+||+.+++|+.+ ..+++||.. +.+-.. .+... ..-
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---g~v~iwd~~----~~~~~~----~~~~h~~~v 184 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---FSVKVWDLS----QKAVLK----SYNAHSSEV 184 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEETT----TTEEEE----EECCCSSCE
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC----CCcEEE----EEcCCCCCE
Confidence 36788887765433221 234444456678899999999875 679999987 443322 23221 223
Q ss_pred ceeEEcCCCc-EEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCc-eEEEccC-CcEEEEEC--CceEEEeC
Q 044265 145 GTDQILPDGS-VIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYP-YVHLLPN-GHLFIFAN--DKAVMYDY 217 (517)
Q Consensus 145 ~s~~~L~dG~-v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp-~~~~~~~-G~iyv~Gg--~~~~~ydp 217 (517)
.+++..+++. +++.++.+ ..+.+| ..+.+.. ..... . ..... .+...++ +++++.|+ ..+.+||.
T Consensus 185 ~~v~~s~~~~~~~~s~~~d-g~v~~wd~~~~~~~~~~~~~-~------~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~ 256 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGED-GRILLWDTRKPKPATRIDFC-A------SDTIPTSVTWHPEKDDTFACGDETGNVSLVNI 256 (357)
T ss_dssp EEEEECTTCSSCEEEEETT-SCEEECCTTSSSCBCBCCCT-T------CCSCEEEEEECTTSTTEEEEEESSSCEEEEES
T ss_pred EEEEEccCCCceeeeeccC-CceEEEECCCCceeeeeeec-c------ccccccchhhhhcccceEEEeecccceeEEEC
Confidence 3445556664 66777655 457777 4433221 11110 0 00111 2333454 67888876 35889999
Q ss_pred CCCeEE
Q 044265 218 ETNKIA 223 (517)
Q Consensus 218 ~t~~w~ 223 (517)
++.+-.
T Consensus 257 ~~~~~~ 262 (357)
T 4g56_B 257 KNPDSA 262 (357)
T ss_dssp SCGGGC
T ss_pred CCCcEe
Confidence 876533
No 128
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.91 E-value=0.12 Score=51.34 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=77.5
Q ss_pred eEEEEECCCCCeEEcc----ccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCcc
Q 044265 70 HSAILDLQTNQIRPLM----ILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWY 144 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~----~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~ 144 (517)
.+.+||..+++-.... ..|.....+.++.+||+.+++|+.+ ..+++||.. +.+-.. .+.. ...-
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~----~~~~~~----~~~~h~~~V 172 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLA----QQVVLS----SYRAHAAQV 172 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETT----TTEEEE----EECCCSSCE
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC----CCcEEE----EEcCcCCce
Confidence 4789999887643221 2355555566778999999999875 679999987 443221 2322 2233
Q ss_pred ceeEEcCCC-cEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEcc-CCcEEEEECC--ceEEEeCC
Q 044265 145 GTDQILPDG-SVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFAND--KAVMYDYE 218 (517)
Q Consensus 145 ~s~~~L~dG-~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~Gg~--~~~~ydp~ 218 (517)
.+++..+++ .+++.|+.+ .++.+| ..+.+.. .... ... ...--.+...+ ++++++.|+. .+.+||.+
T Consensus 173 ~~~~~~~~~~~~l~s~s~D-~~v~iwd~~~~~~~~~~~~-~~~-----~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSED-NRILLWDTRCPKPASQIGC-SAP-----GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp EEEEECSSCTTEEEEEETT-SCEEEEETTSSSCEEECC----------CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred EEEEecCCCCCceeeeccc-cccccccccccceeeeeec-cee-----eccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 445555676 477777765 467777 4443322 1110 000 00001123344 6788888864 58899998
Q ss_pred CCeEE
Q 044265 219 TNKIA 223 (517)
Q Consensus 219 t~~w~ 223 (517)
+++-.
T Consensus 246 ~~~~~ 250 (344)
T 4gqb_B 246 STSCV 250 (344)
T ss_dssp C--CC
T ss_pred CCcEE
Confidence 77543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.83 E-value=0.23 Score=50.63 Aligned_cols=80 Identities=15% Similarity=0.009 Sum_probs=49.1
Q ss_pred ceEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 69 AHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 69 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
..+.+||......+.+.. +.......+..+||+.+++++...+...+++||.. +.+...+ .. ......+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~----tg~~~~l--~~--~~~~~~~~~ 229 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA----NGAVRQV--AS--FPRHNGAPA 229 (415)
T ss_dssp EEEEEEETTSCSCEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT----TCCEEEE--EC--CSSCEEEEE
T ss_pred ceEEEEcCCCCCCEEEeC-CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC----CCcEEEe--ec--CCCcccCEE
Confidence 367888988766655543 22333445678899988888875555689999987 4444433 11 122333455
Q ss_pred EcCCCcEEE
Q 044265 149 ILPDGSVII 157 (517)
Q Consensus 149 ~L~dG~v~v 157 (517)
.-+||+.++
T Consensus 230 ~spdg~~la 238 (415)
T 2hqs_A 230 FSPDGSKLA 238 (415)
T ss_dssp ECTTSSEEE
T ss_pred EcCCCCEEE
Confidence 566776544
No 130
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.82 E-value=0.095 Score=51.39 Aligned_cols=137 Identities=10% Similarity=0.017 Sum_probs=71.4
Q ss_pred eEEEEECCCC-----CeEEcc--ccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-c
Q 044265 70 HSAILDLQTN-----QIRPLM--ILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-G 141 (517)
Q Consensus 70 ~~~~yDp~t~-----~w~~l~--~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~ 141 (517)
.+.+||.... ++..+. ..+.......++.++|+.+++|+.+ ..+++||.... ...+... ..+.. .
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D---~~v~iwd~~~~--~~~~~~~--~~~~~h~ 153 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD---KSVWIWETDES--GEEYECI--SVLQEHS 153 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT---SCEEEEECCTT--CCCCEEE--EEECCCS
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC---CEEEEEeccCC--CCCeEEE--EEeccCC
Confidence 4678887532 222222 2233333345667899999999875 68999998421 2334333 22332 2
Q ss_pred CccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccC--CcEEEEEC--CceEEEe
Q 044265 142 RWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPN--GHLFIFAN--DKAVMYD 216 (517)
Q Consensus 142 R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~--G~iyv~Gg--~~~~~yd 216 (517)
..-.+++.-+++++++.|+.+ .++.+| .....|.....+.. +.... -.+...++ +..++.|+ ..+.+||
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D-~~i~iW~~~~~~~~~~~~~~~----h~~~v-~~~~~~~~~~~~~l~s~s~D~~v~iw~ 227 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYD-DTVRIWKDYDDDWECVAVLNG----HEGTV-WSSDFDKTEGVFRLCSGSDDSTVRVWK 227 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETT-SCEEEEEEETTEEEEEEEECC----CSSCE-EEEEECCSSSSCEEEEEETTSCEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCC-CeEEEEECCCCCeeEEEEccC----CCCcE-EEEEecCCCCeeEEEEEeCCCeEEEEE
Confidence 233455666799998888876 456777 43333332211111 00001 12334455 66677776 3577888
Q ss_pred CCC
Q 044265 217 YET 219 (517)
Q Consensus 217 p~t 219 (517)
..+
T Consensus 228 ~~~ 230 (330)
T 2hes_X 228 YMG 230 (330)
T ss_dssp EEE
T ss_pred ecC
Confidence 754
No 131
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.79 E-value=0.094 Score=52.08 Aligned_cols=147 Identities=15% Similarity=0.110 Sum_probs=76.5
Q ss_pred eEEEEECCCCC------eEEccccC----CCcccceeec----CCCcE-EEecCCCCCCCeEEEecCCC------CCCCC
Q 044265 70 HSAILDLQTNQ------IRPLMILT----DTWCSSGQIL----ADGTV-LQTGGDLDGYKKIRKFSPCE------ANGLC 128 (517)
Q Consensus 70 ~~~~yDp~t~~------w~~l~~~~----~~~c~~~~~l----~dG~l-~v~GG~~~g~~~v~~ydp~~------~~~t~ 128 (517)
.+.+||..+++ +..+.... ........+. ++++. +++|+.+ ..+.+||... .. .-
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~-~~ 167 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADESNSL-TL 167 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHHHHT-TT
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCccccccccc-ee
Confidence 36788877776 55554321 2333345566 78998 8988864 5788898762 10 11
Q ss_pred ceEeccCcccc--------CcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEE
Q 044265 129 DWVELDDVELV--------NGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHL 198 (517)
Q Consensus 129 ~W~~~~~~~m~--------~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~ 198 (517)
.|... ..+. ....-.+++..++| .+++|+.+ ..+.+| ..+.... ......... .....-..+..
T Consensus 168 ~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~h~--~~~~~i~~i~~ 241 (397)
T 1sq9_A 168 NWSPT--LELQGTVESPMTPSQFATSVDISERG-LIATGFNN-GTVQISELSTLRPLYNFESQHSMI--NNSNSIRSVKF 241 (397)
T ss_dssp CCCCE--EEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-SEEEEEETTTTEEEEEEECCC-----CCCCCEEEEEE
T ss_pred eccCc--ceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-CcEEEEECCCCceeEEEecccccc--ccCCccceEEE
Confidence 22211 1221 23334566777788 77777654 456777 4432221 111000000 00001113445
Q ss_pred ccCCcEEEEECC-----ceEEEeCCCCeEEEec
Q 044265 199 LPNGHLFIFAND-----KAVMYDYETNKIAREY 226 (517)
Q Consensus 199 ~~~G~iyv~Gg~-----~~~~ydp~t~~w~~~~ 226 (517)
.++|++++.|+. .+.+||..+.+-...+
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 678998888764 5789999887655443
No 132
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.78 E-value=0.18 Score=54.88 Aligned_cols=139 Identities=14% Similarity=0.145 Sum_probs=82.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~~ 148 (517)
.+.+||..+++-...-..|.....+..+.++|+.+++|+.+ ..+++||... .+.+... ... ....+-.+++
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~---~~~~~~~--~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLG---ECKYTIS--EGGEGHRDWVSCVR 524 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTS---CEEEEEC--SSTTSCSSCEEEEE
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCC---Ccceeec--cCCCCCCCcEEEEE
Confidence 57899998876554434455444456677899999999875 6899999762 2333322 111 1223344555
Q ss_pred EcCCC--cEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCeEE
Q 044265 149 ILPDG--SVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNKIA 223 (517)
Q Consensus 149 ~L~dG--~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~w~ 223 (517)
..+++ ..++.|+.+ .++.+| ....+... .+... ...-..+...++|++++.|+. .+.+||..+++-.
T Consensus 525 ~~~~~~~~~l~s~s~d-~~v~vwd~~~~~~~~--~~~~h-----~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWD-KTVKVWNLSNCKLRS--TLAGH-----TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp ECSCSSSCEEEEEETT-SCEEEEETTTCCEEE--EECCC-----SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred EeCCCCcceEEEEeCC-CeEEEEECCCCcEEE--EEcCC-----CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 66665 456666654 567888 44332211 01100 011113456689999999874 6889999988755
Q ss_pred E
Q 044265 224 R 224 (517)
Q Consensus 224 ~ 224 (517)
.
T Consensus 597 ~ 597 (694)
T 3dm0_A 597 Y 597 (694)
T ss_dssp E
T ss_pred E
Confidence 3
No 133
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.74 E-value=0.27 Score=48.67 Aligned_cols=134 Identities=9% Similarity=0.088 Sum_probs=79.4
Q ss_pred eEEEEECCCCCeEEccccC--CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMILT--DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||..++....+.... ........+.++++++++|+.+ ..+.+||.. ...-..+ ......-.++
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~----~~~~~~~----~~h~~~v~~~ 210 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLD----GHEIFKE----KLHKAKVTHA 210 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETT----SCEEEEE----ECSSSCEEEE
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECC----CCEEEEe----ccCCCcEEEE
Confidence 5788999876666554322 2333445667899999999864 689999985 3322222 1122334566
Q ss_pred EEcCCCc-EEEEcCCCCCceEEe-CCCCC--ceeccchhhccccccCCCCceEEEcc-CCcEEEEEC--CceEEEeCCCC
Q 044265 148 QILPDGS-VIILGGKGANTVEYY-PPRNG--AVSFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 148 ~~L~dG~-v~vvGG~~~~~~E~y-P~~~~--w~~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~Gg--~~~~~ydp~t~ 220 (517)
+..++++ +++.|+.+ ..+.+| ..+.+ ......+.. . ..-..+...+ +|+.++.++ ..+.+||..+.
T Consensus 211 ~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~-----~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVD-ATVKLWDLRNIKDKNSYIAEMPH-----E-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EECSSCTTEEEEEETT-SEEEEEEGGGCCSTTCEEEEEEC-----S-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred EECCCCCCEEEEEeCC-CEEEEEeCCCCCcccceEEEecC-----C-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 7778888 88888765 457777 33211 111100100 0 0111345567 899888887 46889998765
Q ss_pred e
Q 044265 221 K 221 (517)
Q Consensus 221 ~ 221 (517)
+
T Consensus 284 ~ 284 (383)
T 3ei3_B 284 S 284 (383)
T ss_dssp T
T ss_pred c
Confidence 3
No 134
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.69 E-value=0.17 Score=51.54 Aligned_cols=133 Identities=14% Similarity=0.156 Sum_probs=74.1
Q ss_pred eEEEEECCCCCeEEcccc--CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-cCccce
Q 044265 70 HSAILDLQTNQIRPLMIL--TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-GRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-~R~~~s 146 (517)
.+.+||..++....+... ....+.+..+.++|+++++|+.+ ..+.+||.. ...- ..+.. ...-.+
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~----~~~~-----~~~~~h~~~v~~ 255 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMD----GKEL-----WNLRMHKKKVTH 255 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESS----SCBC-----CCSBCCSSCEEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccC----ccee-----EEEecccceEEe
Confidence 478999988776655432 22333445567899999999864 579999976 3221 12221 222334
Q ss_pred eEEcCCCc-EEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCc--eEEEccCCcEEEEECC--ceEEEeCCCC
Q 044265 147 DQILPDGS-VIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP--YVHLLPNGHLFIFAND--KAVMYDYETN 220 (517)
Q Consensus 147 ~~~L~dG~-v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp--~~~~~~~G~iyv~Gg~--~~~~ydp~t~ 220 (517)
++.-+++. +++.|+.+ .++.+| ....... ..... .. .+..+ .+...+||+.++.|+. .+.+||..+.
T Consensus 256 v~~~p~~~~~~~s~s~d-~~v~iwd~~~~~~~-~~~~~-~~----~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 256 VALNPCCDWFLATASVD-QTVKIWDLRQVRGK-ASFLY-SL----PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEECTTCSSEEEEEETT-SBCCEEETTTCCSS-SCCSB-CC----BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred eeecCCCceEEEEecCc-ceeeEEeccccccc-ceEEE-ee----eccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 55556765 56666654 456677 3322111 00000 00 00111 1223468998888874 5889998875
Q ss_pred e
Q 044265 221 K 221 (517)
Q Consensus 221 ~ 221 (517)
.
T Consensus 329 ~ 329 (435)
T 4e54_B 329 D 329 (435)
T ss_dssp S
T ss_pred c
Confidence 4
No 135
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.68 E-value=0.49 Score=52.37 Aligned_cols=254 Identities=10% Similarity=0.033 Sum_probs=124.8
Q ss_pred EEEEECCCCCeEEccc---cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 71 SAILDLQTNQIRPLMI---LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~---~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
..+||+.+++++.... .......+.....+|+|++ |... ..+.+||+. +.++.......+.. ..-.+.
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~---~Gl~~~~~~----~~~~~~~~~~~~~~-~~v~~i 455 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL---GNISYYNTR----LKKFQIIELEKNEL-LDVRVF 455 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT---EEEEEECSS----SCEEEECCSTTTCC-CCEEEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc---CCEEEEcCC----CCcEEEeccCCCCC-CeEEEE
Confidence 4567777766654421 1111112222334788877 3221 357889998 67777661111221 223344
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-CceEEEeCCCCeEEEe
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-DKAVMYDYETNKIARE 225 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-~~~~~ydp~t~~w~~~ 225 (517)
+.-.+|++++... ..+-+| +.+..+......... ....+.-.....-.+|+|++... ....+||++++++..
T Consensus 456 ~~d~~g~lwigt~---~Gl~~~~~~~~~~~~~~~~~~~--~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~- 529 (781)
T 3v9f_A 456 YEDKNKKIWIGTH---AGVFVIDLASKKVIHHYDTSNS--QLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK- 529 (781)
T ss_dssp EECTTSEEEEEET---TEEEEEESSSSSCCEEECTTTS--SCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEE-
T ss_pred EECCCCCEEEEEC---CceEEEeCCCCeEEecccCccc--ccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE-
Confidence 5555788877432 345666 776666432211100 00011111233345899998764 668899999998874
Q ss_pred cCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCc-ccccCCCCCCCCceeEEEecCCCCCceecCCCcceeee
Q 044265 226 YPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGA-FIQRSTDTPAHGSCGRIIATSADPTWEMEDMPFGRIMG 304 (517)
Q Consensus 226 ~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~-~~~~~~~~~a~~s~~~id~~~~~~~W~~~~m~~~R~~~ 304 (517)
+.. +. ..+......++. ..+++|++... . |- + .+++.......|+.. ..++.....
T Consensus 530 ~~~-~~---~l~~~~i~~i~~----d~~g~lWi~T~-~-Glv~----~~d~~~~~~~~~~~~--------~gl~~~~i~- 586 (781)
T 3v9f_A 530 FNQ-YE---GFCSNTINQIYR----SSKGQMWLATG-E-GLVC----FPSARNFDYQVFQRK--------EGLPNTHIR- 586 (781)
T ss_dssp ECT-TT---TCSCSCEEEEEE----CTTSCEEEEET-T-EEEE----ESCTTTCCCEEECGG--------GTCSCCCCC-
T ss_pred ccC-CC---CCCCCeeEEEEE----CCCCCEEEEEC-C-CceE----EECCCCCcEEEcccc--------CCCCCceEE-
Confidence 432 11 111001111211 12577777543 1 21 1 122333222222211 134443332
Q ss_pred eeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCC---CCCccccccceeeecCCCcEEEecCC
Q 044265 305 DMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLN---PGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 305 ~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~---~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
+.+.-.+|+|++.+ .. | +.+|||++. +++... -++.......+++...||++++.|.+
T Consensus 587 ~i~~d~~g~lW~~t-~~-G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 647 (781)
T 3v9f_A 587 AISEDKNGNIWAST-NT-G-------------ISCYITSKK---CFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSIN 647 (781)
T ss_dssp EEEECSSSCEEEEC-SS-C-------------EEEEETTTT---EEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETT
T ss_pred EEEECCCCCEEEEc-CC-c-------------eEEEECCCC---ceEEecccCCccccccccCceEECCCCEEEEECCC
Confidence 22344579999864 22 2 467999988 765432 23322222234556789999998764
No 136
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.67 E-value=0.3 Score=49.43 Aligned_cols=138 Identities=12% Similarity=0.159 Sum_probs=74.8
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||..+++-......+...+ .++..++.+++.|+.+ ..+.++|.. ...... ..+. .........
T Consensus 170 ~v~iWd~~~~~~~~~~~~h~~~v--~~~s~~~~~l~sgs~d---~~i~~~d~~----~~~~~~---~~~~~h~~~~~~~~ 237 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILSSGSRS---GHIHHHDVR----VAEHHV---ATLSGHSQEVCGLR 237 (420)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT----SSSCEE---EEEECCSSCEEEEE
T ss_pred eEEEEEcCCCcEEEEEeCCCCce--EEEeeCCCEEEEEeCC---CceeEeeec----ccceee---EEecccccceeeee
Confidence 58899998877554434444333 2345689999999874 678888876 222211 1122 122234456
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCC--ceeccchhhccccccCCCCceEEEcc-CCcEEEEE-C---CceEEEeCCCC
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNG--AVSFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFA-N---DKAVMYDYETN 220 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~--w~~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~G-g---~~~~~ydp~t~ 220 (517)
..++|+.++.|+.++ .+.+| ..... ......... .... -......+ ++.+++.+ | +.+.+||..++
T Consensus 238 ~~~~g~~l~s~~~D~-~v~i~~~~~~~~~~~~~~~~~~----~~~~-V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 238 WAPDGRHLASGGNDN-LVNVWPSAPGEGGWVPLQTFTQ----HQGA-VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp ECTTSSEEEEEETTS-CEEEEESSCCSSCSCCSEEECC----CSSC-EEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred ecCCCCeeeeeeccc-cceEEeeccccccceeeeeecc----cCCc-eeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 677899988888663 45666 32211 111100000 0000 01123344 45666654 3 46889999998
Q ss_pred eEEEe
Q 044265 221 KIARE 225 (517)
Q Consensus 221 ~w~~~ 225 (517)
+....
T Consensus 312 ~~~~~ 316 (420)
T 4gga_A 312 ACLSA 316 (420)
T ss_dssp EEEEE
T ss_pred cccee
Confidence 76643
No 137
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.62 E-value=0.32 Score=49.03 Aligned_cols=75 Identities=8% Similarity=0.115 Sum_probs=40.6
Q ss_pred cceeEEcCCCcEEEEcCCCCCceEEe-CCCCC--ceeccchhhccccccCCCCceEEEccCC-cEEEEEC--CceEEEeC
Q 044265 144 YGTDQILPDGSVIILGGKGANTVEYY-PPRNG--AVSFPFLADVEDKQMDNLYPYVHLLPNG-HLFIFAN--DKAVMYDY 217 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~--w~~~~~l~~t~~~~~~~~yp~~~~~~~G-~iyv~Gg--~~~~~ydp 217 (517)
-.+++..++|+.++.| . ...+.+| ..... .............+. ..-..+...++| ++++.|+ ..+.+||.
T Consensus 180 v~~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 180 INSISINSDYETYLSA-D-DLRINLWHLEITDRSFNIVDIKPANMEELT-EVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCEEEECTTSSEEEEE-C-SSEEEEEETTEEEEEEEEEECCCSSGGGCC-CCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred eEEEEEcCCCCEEEEe-C-CCeEEEEECCCCCceeeeeecccccccccC-cceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 3456677899998887 3 5567777 43211 111100000000000 111134556788 8888886 46889999
Q ss_pred CCCe
Q 044265 218 ETNK 221 (517)
Q Consensus 218 ~t~~ 221 (517)
.+++
T Consensus 257 ~~~~ 260 (447)
T 3dw8_B 257 RASA 260 (447)
T ss_dssp TTCS
T ss_pred cCCc
Confidence 8765
No 138
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.26 Score=46.70 Aligned_cols=103 Identities=11% Similarity=0.010 Sum_probs=57.4
Q ss_pred eeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCC-
Q 044265 95 GQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPR- 172 (517)
Q Consensus 95 ~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~- 172 (517)
.+. +++..+++|+.+ ..+++||.. +..-... -......-.+++..++++.+++|+.+. .+.+| ...
T Consensus 24 ~~~-~~~~~l~s~~~d---g~v~vw~~~----~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~~~~~~~ 91 (313)
T 3odt_A 24 VVA-VDDSKVASVSRD---GTVRLWSKD----DQWLGTV---VYTGQGFLNSVCYDSEKELLLFGGKDT-MINGVPLFAT 91 (313)
T ss_dssp EEE-EETTEEEEEETT---SEEEEEEES----SSEEEEE---EEECSSCEEEEEEETTTTEEEEEETTS-CEEEEETTCC
T ss_pred EEe-cCCCEEEEEEcC---CcEEEEECC----CCEEEEE---eecCCccEEEEEECCCCCEEEEecCCC-eEEEEEeeec
Confidence 344 788999998864 689999987 3332222 111233345667778999999998764 45555 221
Q ss_pred CCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEe
Q 044265 173 NGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYD 216 (517)
Q Consensus 173 ~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~yd 216 (517)
........+.. ...+...+..+++.++.|+. .+.+||
T Consensus 92 ~~~~~~~~~~~-------~~~~i~~~~~~~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 92 SGEDPLYTLIG-------HQGNVCSLSFQDGVVISGSWDKTAKVWK 130 (313)
T ss_dssp TTSCC-CEECC-------CSSCEEEEEEETTEEEEEETTSEEEEEE
T ss_pred CCCCcccchhh-------cccCEEEEEecCCEEEEEeCCCCEEEEc
Confidence 11111111110 11122333447777777763 577888
No 139
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.60 E-value=0.052 Score=54.64 Aligned_cols=135 Identities=12% Similarity=0.068 Sum_probs=80.2
Q ss_pred eEEEEECCCCCeE-----Ecc--ccCCCcccceeecCCC-cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc---
Q 044265 70 HSAILDLQTNQIR-----PLM--ILTDTWCSSGQILADG-TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL--- 138 (517)
Q Consensus 70 ~~~~yDp~t~~w~-----~l~--~~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m--- 138 (517)
.+.+||..++... .+. ..+........+.++| +++++|+.+ ..+++||.. +.+... .+
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~----~~~~~~----~~~~~ 173 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD---NVILVWDVG----TGAAVL----TLGPD 173 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT---SCEEEEETT----TTEEEE----EECTT
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC---CEEEEEECC----CCCccE----EEecC
Confidence 5788998877431 111 1234444445667887 689998864 579999987 444332 22
Q ss_pred cCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEE---C--Cce
Q 044265 139 VNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA---N--DKA 212 (517)
Q Consensus 139 ~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G---g--~~~ 212 (517)
.....-.+++..+||+.+++|+.+ ..+.+| +.+...... .... .....-..+...++|++++.| . ..+
T Consensus 174 ~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i 247 (402)
T 2aq5_A 174 VHPDTIYSVDWSRDGALICTSCRD-KRVRVIEPRKGTVVAE-KDRP----HEGTRPVHAVFVSEGKILTTGFSRMSERQV 247 (402)
T ss_dssp TCCSCEEEEEECTTSSCEEEEETT-SEEEEEETTTTEEEEE-EECS----SCSSSCCEEEECSTTEEEEEEECTTCCEEE
T ss_pred CCCCceEEEEECCCCCEEEEEecC-CcEEEEeCCCCceeee-eccC----CCCCcceEEEEcCCCcEEEEeccCCCCceE
Confidence 123344566777899998988865 457777 554332210 0000 000111235566899999988 3 457
Q ss_pred EEEeCCCCe
Q 044265 213 VMYDYETNK 221 (517)
Q Consensus 213 ~~ydp~t~~ 221 (517)
.+||..+.+
T Consensus 248 ~iwd~~~~~ 256 (402)
T 2aq5_A 248 ALWDTKHLE 256 (402)
T ss_dssp EEEETTBCS
T ss_pred EEEcCcccc
Confidence 889987753
No 140
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.45 E-value=1.5 Score=48.44 Aligned_cols=254 Identities=10% Similarity=0.070 Sum_probs=124.9
Q ss_pred eEEEEECCCCCeEEccccC--------CCcccceeecCCCc-EEEecCCCCCCCeEEEecCCCCCCCCceEeccC--ccc
Q 044265 70 HSAILDLQTNQIRPLMILT--------DTWCSSGQILADGT-VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDD--VEL 138 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~--------~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~--~~m 138 (517)
-...||+.+++++...... .....+.....+|+ |++ |... ..+.+||+. +.++..... ..+
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~----~~~~~~~~~~~~~l 449 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN----SGQVENFNQRNSQL 449 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT----TCCEEEECTTTSCC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC----CCcEEEeecCCCCc
Confidence 3567888888887654221 11112222335788 665 3332 357889988 566665410 012
Q ss_pred cCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECCceEEEeC
Q 044265 139 VNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFANDKAVMYDY 217 (517)
Q Consensus 139 ~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~~~~~ydp 217 (517)
... .-.+.+.-.+|++++... ..+-+| |.+.++.......... ......-.....-.+|+||+.......+||+
T Consensus 450 ~~~-~v~~i~~d~~g~lwigt~---~Gl~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~~g~lWigt~~Gl~~~~~ 524 (795)
T 4a2l_A 450 VNE-NVYAILPDGEGNLWLGTL---SALVRFNPEQRSFTTIEKEKDGT-PVVSKQITTLFRDSHKRLWIGGEEGLSVFKQ 524 (795)
T ss_dssp SCS-CEEEEEECSSSCEEEEES---SCEEEEETTTTEEEECCBCTTCC-BCCCCCEEEEEECTTCCEEEEESSCEEEEEE
T ss_pred CCC-eeEEEEECCCCCEEEEec---CceeEEeCCCCeEEEcccccccc-ccCCceEEEEEECCCCCEEEEeCCceEEEeC
Confidence 222 223444555788887543 235666 7666665322110000 0000111123334589999887667889999
Q ss_pred CCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCcee---
Q 044265 218 ETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEM--- 294 (517)
Q Consensus 218 ~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~--- 294 (517)
.++++ . +..... ....+......++. ..+|+|++.... +- .++|+. +.+++.
T Consensus 525 ~~~~~-~-~~~~~~-~~~l~~~~i~~i~~----d~~g~lWigT~~--Gl--------------~~~d~~--~~~~~~~~~ 579 (795)
T 4a2l_A 525 EGLDI-Q-KASILP-VSNVTKLFTNCIYE----ASNGIIWVGTRE--GF--------------YCFNEK--DKQIKRYNT 579 (795)
T ss_dssp ETTEE-E-ECCCSC-SCGGGGSCEEEEEE----CTTSCEEEEESS--CE--------------EEEETT--TTEEEEECG
T ss_pred CCCeE-E-EecCCC-CCCCCCCeeEEEEE----CCCCCEEEEeCC--Cc--------------eeECCC--CCcEEEeCC
Confidence 99887 3 321100 00011001111211 125777764321 21 223332 122221
Q ss_pred c-CCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCC---CCCccccccceeeecC
Q 044265 295 E-DMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLN---PGTIPRMYHSTANLLP 370 (517)
Q Consensus 295 ~-~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~---~~~~~R~yhs~a~ll~ 370 (517)
. .++..... +.+.-.+|+|++... .| +.+|||++. +++... .++.......+++...
T Consensus 580 ~~gl~~~~i~-~i~~d~~g~lWi~t~--~G-------------l~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~ 640 (795)
T 4a2l_A 580 TNGLPNNVVY-GILEDSFGRLWLSTN--RG-------------ISCFNPETE---KFRNFTESDGLQSNQFNTASYCRTS 640 (795)
T ss_dssp GGTCSCSCEE-EEEECTTSCEEEEET--TE-------------EEEEETTTT---EEEEECGGGTCSCSCEEEEEEEECT
T ss_pred CCCCchhheE-EEEECCCCCEEEEcC--Cc-------------eEEEcCCCC---cEEEcCCcCCCccccCccCceeECC
Confidence 1 34443333 223335789998652 23 467999988 776432 2322222223455678
Q ss_pred CCcEEEecCC
Q 044265 371 DGRVLIAGSN 380 (517)
Q Consensus 371 dG~V~v~GG~ 380 (517)
||++++.|.+
T Consensus 641 ~G~l~~g~~~ 650 (795)
T 4a2l_A 641 VGQMYFGGIN 650 (795)
T ss_dssp TSCEEEEETT
T ss_pred CCeEEEecCC
Confidence 9999988764
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.38 E-value=0.45 Score=51.88 Aligned_cols=111 Identities=14% Similarity=-0.007 Sum_probs=67.3
Q ss_pred eEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCC-------------
Q 044265 24 MHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDT------------- 90 (517)
Q Consensus 24 ~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~------------- 90 (517)
.+.+.-+||+.+++.+...+ +. ....+.+||..+++.+.+...+..
T Consensus 40 ~~~~~SpdG~~la~~~~~d~--------~~-------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 98 (741)
T 2ecf_A 40 MKPKVAPDGSRVTFLRGKDS--------DR-------------NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKA 98 (741)
T ss_dssp EEEEECTTSSEEEEEECCSS--------CT-------------TEEEEEEEETTTCCEEEEECGGGTC------------
T ss_pred CCceEecCCCEEEEEeccCC--------CC-------------cccEEEEEECCCCceeEccchhhcccccccccchhhh
Confidence 45667789997777654111 00 012578899999988766532211
Q ss_pred -----------cccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCC---ceEeccCccccCcCccceeEEcCCCcEE
Q 044265 91 -----------WCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLC---DWVELDDVELVNGRWYGTDQILPDGSVI 156 (517)
Q Consensus 91 -----------~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~---~W~~~~~~~m~~~R~~~s~~~L~dG~v~ 156 (517)
.....++.+||+.++++.. ..+++||.. +. .-..+ . .........+.-+||+.+
T Consensus 99 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~----~~~~~~~~~l--~--~~~~~~~~~~~SPDG~~l 166 (741)
T 2ecf_A 99 RRERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK----QEGKAAVRQL--T--HGEGFATDAKLSPKGGFV 166 (741)
T ss_dssp --------CCEESCCCEECTTSSEEEEEET----TEEEEEESS----SCSTTSCCBC--C--CSSSCEEEEEECTTSSEE
T ss_pred hhhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC----CCCcceEEEc--c--cCCcccccccCCCCCCEE
Confidence 1234567889998888764 689999987 33 33222 1 112334456677899977
Q ss_pred EEcCCCCCceEEe
Q 044265 157 ILGGKGANTVEYY 169 (517)
Q Consensus 157 vvGG~~~~~~E~y 169 (517)
+.+.. ..+.+|
T Consensus 167 a~~~~--~~i~~~ 177 (741)
T 2ecf_A 167 SFIRG--RNLWVI 177 (741)
T ss_dssp EEEET--TEEEEE
T ss_pred EEEeC--CcEEEE
Confidence 76642 245555
No 142
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.38 E-value=0.38 Score=47.46 Aligned_cols=149 Identities=10% Similarity=0.111 Sum_probs=81.9
Q ss_pred EEEee-CCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccc-------------cCCCc
Q 044265 26 TAVTR-FNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMI-------------LTDTW 91 (517)
Q Consensus 26 ~~ll~-~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~-------------~~~~~ 91 (517)
+..-+ +|+.++.++.+ | .+.+||..+++...... .+...
T Consensus 49 ~~~s~~~~~~l~~~~~d----------g-----------------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSD----------G-----------------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp EEECTTTCCEEEEEETT----------S-----------------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred EEEecCCCCEEEEEcCC----------C-----------------eEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 34556 88888887643 2 36788887765432211 12333
Q ss_pred ccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcC---CCcEEEEcCCCCCceE
Q 044265 92 CSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILP---DGSVIILGGKGANTVE 167 (517)
Q Consensus 92 c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~---dG~v~vvGG~~~~~~E 167 (517)
.....+.+ ++.++++|+.+ ..+++||.. +.+-... +.......+....+ ++.++++|+.+ ..+.
T Consensus 102 v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~ 169 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFD---KTLKVWDTN----TLQTADV----FNFEETVYSHHMSPVSTKHCLVAVGTRG-PKVQ 169 (408)
T ss_dssp EEEEEECTTCTTCEEEEETT---SEEEEEETT----TTEEEEE----EECSSCEEEEEECSSCSSCCEEEEEESS-SSEE
T ss_pred EEEEEEccCCCcEEEEEeCC---CeEEEeeCC----CCcccee----ccCCCceeeeEeecCCCCCcEEEEEcCC-CeEE
Confidence 33444566 77888888864 689999987 4433322 22222223344444 45577877765 4567
Q ss_pred Ee-CCCCCce-eccchhhccccccCCCCceEEEccCCc-EEEEECC--ceEEEeCCCCe
Q 044265 168 YY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAND--KAVMYDYETNK 221 (517)
Q Consensus 168 ~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg~--~~~~ydp~t~~ 221 (517)
+| ..+.... .... . ...-..+...++++ +++.|+. .+.+||..+..
T Consensus 170 ~~d~~~~~~~~~~~~---~-----~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 170 LCDLKSGSCSHILQG---H-----RQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp EEESSSSCCCEEECC---C-----CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred EEeCCCcceeeeecC---C-----CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 77 4432221 1110 0 00111244567777 7877763 58899987653
No 143
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.36 E-value=0.25 Score=50.17 Aligned_cols=159 Identities=14% Similarity=0.105 Sum_probs=84.8
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++.......+.... ..+..++..+++|+.+ ..+.+||.... ...... ..+......-....
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~v--~~l~~~~~~l~s~s~d---g~i~vwd~~~~---~~~~~~--~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKD---RSIAVWDMASP---TDITLR--RVLVGHRAAVNVVD 263 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSCE--EEEECCTTEEEEEETT---SCEEEEECSSS---SCCEEE--EEECCCSSCEEEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCcE--EEEEEcCCEEEEeeCC---CcEEEEeCCCC---CCceee--eEecCCCCcEEEEE
Confidence 57899998887654333332221 2223356788888864 67999998731 112111 11222222222333
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeEEEec
Q 044265 150 LPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKIAREY 226 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~~~~ 226 (517)
. +++.+++|+.+ ..+.+| ..+..-.. . +.. ...+...+..++++++.|+ ..+.+||..+++-...+
T Consensus 264 ~-~~~~l~s~~~d-g~i~vwd~~~~~~~~-~-~~~-------~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 264 F-DDKYIVSASGD-RTIKVWNTSTCEFVR-T-LNG-------HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp E-ETTEEEEEETT-SEEEEEETTTCCEEE-E-EEC-------CSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred e-CCCEEEEEeCC-CeEEEEECCcCcEEE-E-EcC-------CCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 4 78888888765 457777 44432211 0 110 0112234445788888876 46889999988765443
Q ss_pred CCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 227 PPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 227 p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
.+. .. ....+ . .+++.+++|+.+
T Consensus 333 ---~~h-~~----~v~~~-~-----~~~~~l~sg~~d 355 (435)
T 1p22_A 333 ---EGH-EE----LVRCI-R-----FDNKRIVSGAYD 355 (435)
T ss_dssp ---CCC-SS----CEEEE-E-----CCSSEEEEEETT
T ss_pred ---eCC-cC----cEEEE-E-----ecCCEEEEEeCC
Confidence 211 11 11111 1 277888888876
No 144
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.36 E-value=0.17 Score=49.09 Aligned_cols=117 Identities=13% Similarity=0.051 Sum_probs=67.4
Q ss_pred CCCcccceeecCC---CcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCC
Q 044265 88 TDTWCSSGQILAD---GTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGA 163 (517)
Q Consensus 88 ~~~~c~~~~~l~d---G~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~ 163 (517)
|.......++.++ |+++++|+.+ ..+++||.. +...... ..+. ....-.+++..++|+.++.|+.+
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~d---g~i~iw~~~----~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d- 107 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWA---NDVRCWEVQ----DSGQTIP--KAQQMHTGPVLDVCWSDDGSKVFTASCD- 107 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETT---SEEEEEEEC----TTSCEEE--EEEEECSSCEEEEEECTTSSEEEEEETT-
T ss_pred CCCceEEEEEcCCCCCceEEEEECCC---CcEEEEEcC----CCCceeE--EEeccccCCEEEEEECcCCCEEEEEcCC-
Confidence 4444444556677 6999999864 579999987 3222211 1122 22334456677899998888765
Q ss_pred CceEEe-CCCCCceeccchhhccccccCCCCceEEE--ccCCcEEEEEC--CceEEEeCCCCeE
Q 044265 164 NTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHL--LPNGHLFIFAN--DKAVMYDYETNKI 222 (517)
Q Consensus 164 ~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~--~~~G~iyv~Gg--~~~~~ydp~t~~w 222 (517)
..+.+| ..+...... ... ..... .+.. .+++++++.|+ ..+.+||..+++-
T Consensus 108 g~v~iwd~~~~~~~~~--~~~-----~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQI--AQH-----DAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp SEEEEEETTTTEEEEE--EEC-----SSCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred CcEEEEEcCCCCceee--ccc-----cCceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 467777 443332211 000 00011 2233 56888888886 4688999887653
No 145
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.34 E-value=0.89 Score=44.59 Aligned_cols=234 Identities=12% Similarity=0.103 Sum_probs=111.5
Q ss_pred CCeEEcccc---CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCccceeEEcCCCc
Q 044265 79 NQIRPLMIL---TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTDQILPDGS 154 (517)
Q Consensus 79 ~~w~~l~~~---~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~~~L~dG~ 154 (517)
.+|+.+... .+.......+ .++++|++|-. ..+ |-..+ ...+|++. ... ..+-....++...+++
T Consensus 66 ~tW~~~~~~~~~~~~~~~~i~~-~~~~~~~~g~~----g~i--~~S~D--gG~tW~~~--~~~~~~~~~~~~i~~~~~~~ 134 (327)
T 2xbg_A 66 QTWEPRTLVLDHSDYRFNSVSF-QGNEGWIVGEP----PIM--LHTTD--GGQSWSQI--PLDPKLPGSPRLIKALGNGS 134 (327)
T ss_dssp SSCEECCCCCSCCCCEEEEEEE-ETTEEEEEEET----TEE--EEESS--TTSSCEEC--CCCTTCSSCEEEEEEEETTE
T ss_pred CCCeECCCCCCCCCccEEEEEe-cCCeEEEEECC----CeE--EEECC--CCCCceEC--ccccCCCCCeEEEEEECCCC
Confidence 478876532 1222223333 35778877532 122 32221 15789987 211 1111123455556788
Q ss_pred EEEEcCCCCCceEEe-CC--CCCceeccchhhccccccCCCCceEEEccCCcEEEEECCc-eEE-EeCCCCeEEEecCCC
Q 044265 155 VIILGGKGANTVEYY-PP--RNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFANDK-AVM-YDYETNKIAREYPPL 229 (517)
Q Consensus 155 v~vvGG~~~~~~E~y-P~--~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~~-~~~-ydp~t~~w~~~~p~~ 229 (517)
+|++|... .+| .. ..+|........ .....+...+++++++++... +.. -|....+|+. +..
T Consensus 135 ~~~~~~~g----~v~~S~DgG~tW~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~-~~~- 201 (327)
T 2xbg_A 135 AEMITNVG----AIYRTKDSGKNWQALVQEAI-------GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP-HNR- 201 (327)
T ss_dssp EEEEETTC----CEEEESSTTSSEEEEECSCC-------CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE-EEC-
T ss_pred EEEEeCCc----cEEEEcCCCCCCEEeecCCC-------cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE-CCC-
Confidence 98887532 244 22 356874321100 011234455688888887432 222 2333567874 422
Q ss_pred CCCCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceecC---CCcceeeeee
Q 044265 230 DGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEMED---MPFGRIMGDM 306 (517)
Q Consensus 230 p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~~---m~~~R~~~~~ 306 (517)
+. .... ...+..+ ++++|+++.. +.. .+-+ .+...+|+... ++........
T Consensus 202 ~~-~~~~---~~~~~~~------~g~~~~~~~~--G~~-------------~~s~-~D~G~tW~~~~~~~~~~~~~~~~v 255 (327)
T 2xbg_A 202 TT-SRRL---HNMGFTP------DGRLWMIVNG--GKI-------------AFSD-PDNSENWGELLSPLRRNSVGFLDL 255 (327)
T ss_dssp CS-SSCE---EEEEECT------TSCEEEEETT--TEE-------------EEEE-TTEEEEECCCBCTTSSCCSCEEEE
T ss_pred CC-CCcc---ceeEECC------CCCEEEEeCC--ceE-------------EEec-CCCCCeeEeccCCcccCCcceEEE
Confidence 21 1111 1122222 6788877642 111 0000 11135788653 3443233333
Q ss_pred EEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCC-CCccccccceeeecCCCcEEEecCC
Q 044265 307 VMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNP-GTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 307 v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~-~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
+..+++++|++|+. |. +|- .++.|++|+.+.. ...+..+++++. ..+++++++|..
T Consensus 256 ~~~~~~~~~~~g~~--g~--------------i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~-~~~~~~~~~G~~ 312 (327)
T 2xbg_A 256 AYRTPNEVWLAGGA--GA--------------LLC-SQDGGQTWQQDVDVKKVPSNFYKILF-FSPDQGFILGQK 312 (327)
T ss_dssp EESSSSCEEEEEST--TC--------------EEE-ESSTTSSCEECGGGTTSSSCCCEEEE-EETTEEEEECST
T ss_pred EecCCCEEEEEeCC--Ce--------------EEE-eCCCCcccEEcCccCCCCCCeEEEEE-ECCCceEEEcCC
Confidence 34468899998763 21 121 1345679987653 233444454443 367787777753
No 146
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.33 E-value=0.088 Score=51.01 Aligned_cols=116 Identities=9% Similarity=-0.080 Sum_probs=63.7
Q ss_pred CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCc-eEeccCccccCcCccceeEEcCCCc-EEEEcCCCCCc
Q 044265 88 TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCD-WVELDDVELVNGRWYGTDQILPDGS-VIILGGKGANT 165 (517)
Q Consensus 88 ~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~-W~~~~~~~m~~~R~~~s~~~L~dG~-v~vvGG~~~~~ 165 (517)
|.....+..+.++|+++++|+.+ ..+++||.. +.. .... .........-.+++..++|+ .+++|+.+ ..
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d---~~v~iw~~~----~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~ 80 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWD---GSLTVYKFD----IQAKNVDL-LQSLRYKHPLLCCNFIDNTDLQIYVGTVQ-GE 80 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETT---SEEEEEEEE----TTTTEEEE-EEEEECSSCEEEEEEEESSSEEEEEEETT-SC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCC---CeEEEEEeC----CCCccccc-eeeeecCCceEEEEECCCCCcEEEEEcCC-Ce
Confidence 33333445566789999998764 679999987 333 1111 01122333445666777899 88888765 45
Q ss_pred eEEe-C-CCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCC
Q 044265 166 VEYY-P-PRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYET 219 (517)
Q Consensus 166 ~E~y-P-~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t 219 (517)
+.+| . ............ . . ..-..+...+ +++++.++. .+.+||..+
T Consensus 81 i~~wd~~~~~~~~~~~~~~-~----~-~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNE-A----N-LGICRICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp EEEECSSSSSSEEECBSCC-C----C-SCEEEEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred EEEEEeccCCceEeccccC-C----C-CceEEEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 7777 5 443322211100 0 0 0011233445 777777763 577888765
No 147
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.30 E-value=0.42 Score=45.61 Aligned_cols=94 Identities=13% Similarity=0.147 Sum_probs=53.9
Q ss_pred eEEEEECCCC--CeEEccc--cCCCcccceeecC--CCcEEEecCCCCCCCeEEEecCCCCCC---CCceEeccCccccC
Q 044265 70 HSAILDLQTN--QIRPLMI--LTDTWCSSGQILA--DGTVLQTGGDLDGYKKIRKFSPCEANG---LCDWVELDDVELVN 140 (517)
Q Consensus 70 ~~~~yDp~t~--~w~~l~~--~~~~~c~~~~~l~--dG~l~v~GG~~~g~~~v~~ydp~~~~~---t~~W~~~~~~~m~~ 140 (517)
.+.+||..++ .++.+.. .+........+.+ |++++++|+.+ ..+++||...... ...|... ..+..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~--~~~~~ 108 (351)
T 3f3f_A 34 HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD---KTVKLWEEDPDQEECSGRRWNKL--CTLND 108 (351)
T ss_dssp EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEECTTSCTTSSCSEEEE--EEECC
T ss_pred eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC---CeEEEEecCCCcccccccCccee--eeecc
Confidence 4678887754 3333322 2333333444555 69999999874 5789999873200 1234433 22332
Q ss_pred -cCccceeEEcCC--CcEEEEcCCCCCceEEe
Q 044265 141 -GRWYGTDQILPD--GSVIILGGKGANTVEYY 169 (517)
Q Consensus 141 -~R~~~s~~~L~d--G~v~vvGG~~~~~~E~y 169 (517)
...-.+++..++ ++.++.|+.+ ..+.+|
T Consensus 109 ~~~~v~~~~~~~~~~~~~l~~~~~d-g~v~iw 139 (351)
T 3f3f_A 109 SKGSLYSVKFAPAHLGLKLACLGND-GILRLY 139 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETT-CEEEEE
T ss_pred cCCceeEEEEcCCCCCcEEEEecCC-CcEEEe
Confidence 222345666777 8888888865 356677
No 148
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.29 E-value=0.14 Score=51.07 Aligned_cols=167 Identities=9% Similarity=0.055 Sum_probs=91.5
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
.+.+||+.+.+...... +.......++.+||++++.++. ..+.+|+.. +...... .... ......+++
T Consensus 158 ~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~----~~~~~~~~~----~~~~~~~--~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG----SSLEVISTV----TGSCIAR--KTDFDKNWSLSKIN 226 (365)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS----SCEEEEETT----TCCEEEE--ECCCCTTEEEEEEE
T ss_pred EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc----eeEEEEEec----cCcceee--eecCCCCCCEEEEE
Confidence 57899999877654322 3333445667899999999874 356677765 3333221 1111 111233556
Q ss_pred EcCCCcEEEEcCCCCC---ceEEe-CCCCCceec--cchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCC
Q 044265 149 ILPDGSVIILGGKGAN---TVEYY-PPRNGAVSF--PFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETN 220 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~---~~E~y-P~~~~w~~~--~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~ 220 (517)
..+||+.++.++.+.. .+..| ......... ..+.. . ...--.+...+||++++.|+. .+.+||..+.
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~----~-~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN----R-FKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES----S-CSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC----C-CCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 6789999998876542 22223 111111110 00000 0 000113456689999999874 6899999998
Q ss_pred eEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 221 KIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 221 ~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
+-.+.+ +.+. ..+ =.++.+.+ +++.++.|+.+
T Consensus 302 ~~~~~~--~~gH--~~~--V~~v~fSp-----dg~~laS~S~D 333 (365)
T 4h5i_A 302 SMSKIF--KQAH--SFA--ITEVTISP-----DSTYVASVSAA 333 (365)
T ss_dssp EEEEEE--TTSS--SSC--EEEEEECT-----TSCEEEEEETT
T ss_pred cEEEEe--cCcc--cCC--EEEEEECC-----CCCEEEEEeCC
Confidence 765433 1111 110 12233322 89999998876
No 149
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.27 E-value=0.73 Score=43.81 Aligned_cols=115 Identities=14% Similarity=0.053 Sum_probs=64.6
Q ss_pred ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC-ccceeEEcC--CCcEEEEcCCCCCceEEe-
Q 044265 94 SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR-WYGTDQILP--DGSVIILGGKGANTVEYY- 169 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R-~~~s~~~L~--dG~v~vvGG~~~~~~E~y- 169 (517)
...+.++|+++++|+.+ ..+++||.... ...+... ..+.... .-.+++..+ |++.++.|+.+ ..+.+|
T Consensus 16 ~~~~~~~~~~l~~~~~d---g~i~iw~~~~~--~~~~~~~--~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-g~v~vwd 87 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSD---QHIKVFKLDKD--TSNWELS--DSWRAHDSSIVAIDWASPEYGRIIASASYD-KTVKLWE 87 (351)
T ss_dssp EEEECSSSSEEEEEETT---SEEEEEEECSS--SCCEEEE--EEEECCSSCEEEEEECCGGGCSEEEEEETT-SCEEEEE
T ss_pred EEEEcCCCCEEEEeeCC---CeEEEEECCCC--CCcceec--ceeccCCCcEEEEEEcCCCCCCEEEEEcCC-CeEEEEe
Confidence 34556789999999864 58999998732 3344443 2333222 233445555 58898988875 456777
Q ss_pred CCCC-------CceeccchhhccccccCCCCceEEEccC--CcEEEEEC--CceEEEeCCCCe
Q 044265 170 PPRN-------GAVSFPFLADVEDKQMDNLYPYVHLLPN--GHLFIFAN--DKAVMYDYETNK 221 (517)
Q Consensus 170 P~~~-------~w~~~~~l~~t~~~~~~~~yp~~~~~~~--G~iyv~Gg--~~~~~ydp~t~~ 221 (517)
.... .|.....+.. . ...-..+...++ +++++.|+ ..+.+||..+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~----~-~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLND----S-KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECC----C-SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cCCCcccccccCcceeeeecc----c-CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 3321 1121111110 0 001112445567 88888876 458899987653
No 150
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.13 Score=52.00 Aligned_cols=173 Identities=13% Similarity=0.155 Sum_probs=87.4
Q ss_pred EEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCc-eEeccCccccCcCccceeEEc
Q 044265 73 ILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCD-WVELDDVELVNGRWYGTDQIL 150 (517)
Q Consensus 73 ~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~-W~~~~~~~m~~~R~~~s~~~L 150 (517)
.|++.......+...|.....+.++.+ ||+++++|+.+ ..+++||..... ... +... ..+.....-.+++..
T Consensus 47 ~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~d---g~v~vwd~~~~~-~~~~~~~~--~~~~h~~~v~~~~~~ 120 (437)
T 3gre_A 47 MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQ---GVIKIWNLKEII-VGEVYSSS--LTYDCSSTVTQITMI 120 (437)
T ss_dssp GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETT---SEEEEEEHHHHH-TTCCCSCS--EEEECSSCEEEEEEC
T ss_pred cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCC---ceEEEeECcccc-cCccccee--eeccCCCCEEEEEEe
Confidence 355444333444344444455566778 99999999864 689999976200 011 1111 112233344566777
Q ss_pred CCCcEEEEcCCCCCceEEe-CC---CCCcee-c--cchhhcccccc--CCCCc-eEE--EccCCcEEEEEC--CceEEEe
Q 044265 151 PDGSVIILGGKGANTVEYY-PP---RNGAVS-F--PFLADVEDKQM--DNLYP-YVH--LLPNGHLFIFAN--DKAVMYD 216 (517)
Q Consensus 151 ~dG~v~vvGG~~~~~~E~y-P~---~~~w~~-~--~~l~~t~~~~~--~~~yp-~~~--~~~~G~iyv~Gg--~~~~~yd 216 (517)
++++.++.|+.+. ++.+| .. ..+... . ..+.... ..+ ...+. .+. ..+++++++.|+ ..+.+||
T Consensus 121 ~~~~~l~s~s~dg-~i~vwd~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 198 (437)
T 3gre_A 121 PNFDAFAVSSKDG-QIIVLKVNHYQQESEVKFLNCECIRKIN-LKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD 198 (437)
T ss_dssp TTSSEEEEEETTS-EEEEEEEEEEEETTEEEEEEEEEEEEEE-GGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEeCCC-EEEEEEeccccCCceeeccccceeEEEE-ccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 8899999888763 45565 21 111110 0 0000000 000 00111 111 225788888886 4688999
Q ss_pred CCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 217 YETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 217 p~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
..+.+-...+..-+. ... -.++.+. .+++.+++|+.+
T Consensus 199 ~~~~~~~~~~~~~~h---~~~--v~~~~~s-----~~~~~l~s~~~d 235 (437)
T 3gre_A 199 IRTLERLQIIENSPR---HGA--VSSICID-----EECCVLILGTTR 235 (437)
T ss_dssp TTTCCEEEEEECCGG---GCC--EEEEEEC-----TTSCEEEEEETT
T ss_pred CCCCeeeEEEccCCC---CCc--eEEEEEC-----CCCCEEEEEcCC
Confidence 998876544321000 000 1122221 168888888876
No 151
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.23 E-value=0.19 Score=48.71 Aligned_cols=115 Identities=9% Similarity=0.009 Sum_probs=61.0
Q ss_pred cceeecCCC-cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCC---CcEEEEcCCCCCceEE
Q 044265 93 SSGQILADG-TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPD---GSVIILGGKGANTVEY 168 (517)
Q Consensus 93 ~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~d---G~v~vvGG~~~~~~E~ 168 (517)
....+.++| +++++|+...+...+++||.. +.+.... ........-.+++..++ |+.++.|+.+ ..+.+
T Consensus 22 ~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~----~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-g~i~i 94 (357)
T 3i2n_A 22 FDCKWVPCSAKFVTMGNFARGTGVIQLYEIQ----HGDLKLL--REIEKAKPIKCGTFGATSLQQRYLATGDFG-GNLHI 94 (357)
T ss_dssp EEEEECTTSSEEEEEEC--CCCEEEEEEEEC----SSSEEEE--EEEEESSCEEEEECTTCCTTTCCEEEEETT-SCEEE
T ss_pred EEEEEcCCCceEEEecCccCCCcEEEEEeCC----CCcccce--eeecccCcEEEEEEcCCCCCCceEEEecCC-CeEEE
Confidence 344566777 566667652223689999987 5555433 22233333445556666 6888888765 45677
Q ss_pred e-CCCCC--ceeccchhhccccccCCCCceE-----EEccCCcEEEEECC--ceEEEeCCCCe
Q 044265 169 Y-PPRNG--AVSFPFLADVEDKQMDNLYPYV-----HLLPNGHLFIFAND--KAVMYDYETNK 221 (517)
Q Consensus 169 y-P~~~~--w~~~~~l~~t~~~~~~~~yp~~-----~~~~~G~iyv~Gg~--~~~~ydp~t~~ 221 (517)
| ....+ ...... . ........ ...++++.++.|+. .+.+||..+.+
T Consensus 95 wd~~~~~~~~~~~~~---~----~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 95 WNLEAPEMPVYSVKG---H----KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp ECTTSCSSCSEEECC---C----SSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred EeCCCCCccEEEEEe---c----ccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 7 33322 111110 0 00000000 12368888888863 68899998764
No 152
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.22 E-value=0.24 Score=52.26 Aligned_cols=227 Identities=10% Similarity=0.055 Sum_probs=115.9
Q ss_pred CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCC----ceEeccCccccC-cCc-cceeEEcC--CCcEEEEc
Q 044265 88 TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLC----DWVELDDVELVN-GRW-YGTDQILP--DGSVIILG 159 (517)
Q Consensus 88 ~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~----~W~~~~~~~m~~-~R~-~~s~~~L~--dG~v~vvG 159 (517)
+.......++.+||+++++|+. ..+.+||.. +. +-. ..+.. ... -.+++..+ ||+.++.|
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~~----~~v~v~~~~----~~~~~~~~~----~~~~~h~~~~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPCG----KSAFVRCLD----DGDSKVPPV----VQFTGHGSSVVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEET----TEEEEEECC----SSCCSSCSE----EEECTTTTSCEEEEEECSSTTCCEEEEE
T ss_pred ccCceeEEEECCCCCEEEEecC----CeEEEEECC----CCCCccccc----eEEecCCCceEEEEEECcCCCCCEEEEe
Confidence 3444455667889999999872 579999987 33 211 12332 223 35667788 99999998
Q ss_pred CCCCCceEEe-CCCC------CceeccchhhccccccCCCCceEEEccCCcEEEEECCc----eEEEeCCCCeEEEecCC
Q 044265 160 GKGANTVEYY-PPRN------GAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFANDK----AVMYDYETNKIAREYPP 228 (517)
Q Consensus 160 G~~~~~~E~y-P~~~------~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~~----~~~ydp~t~~w~~~~p~ 228 (517)
+.+ ..+.+| ..+. .......+.. . ...-..+...++|+.+++++.. ..++.+.+++....+
T Consensus 85 ~~d-g~v~vw~~~~~~~~~~~~~~~~~~~~~----~-~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~-- 156 (615)
T 1pgu_A 85 DES-GKVIVWGWTFDKESNSVEVNVKSEFQV----L-AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV-- 156 (615)
T ss_dssp ETT-SEEEEEEEEEEGGGTEEEEEEEEEEEC----C-SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEEC--
T ss_pred cCC-CEEEEEeCCCCcccccccccccchhhc----c-cccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceee--
Confidence 865 456777 3211 1111100100 0 0111234556899988887743 445544455544333
Q ss_pred CCCCCCCCCCCCceeeeecccCccccE-EEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCC--cc---e
Q 044265 229 LDGGPRNYPSAGSSAMLALEGDFATAV-IVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMP--FG---R 301 (517)
Q Consensus 229 ~p~~~r~~~~~g~~v~l~~~~~~~~gk-I~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~--~~---R 301 (517)
.+. .... -.....| +++ ++++|+.+ + .+..+|+. ..+.. .+. .. .
T Consensus 157 -~~~-~~~v--~~~~~~~------~~~~~l~~~~~d-~-------------~v~vwd~~----~~~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 157 -SGH-SQRI--NACHLKQ------SRPMRSMTVGDD-G-------------SVVFYQGP----PFKFSASDRTHHKQGSF 208 (615)
T ss_dssp -CSC-SSCE--EEEEECS------SSSCEEEEEETT-T-------------EEEEEETT----TBEEEEEECSSSCTTCC
T ss_pred -ecC-CccE--EEEEECC------CCCcEEEEEeCC-C-------------cEEEEeCC----CcceeeeecccCCCCce
Confidence 211 1100 1122222 444 67777765 2 12334432 12221 111 11 2
Q ss_pred eeeeeEEecC-CcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceec-cCCC---CCccccccceeeecCCCcEEE
Q 044265 302 IMGDMVMLPT-GDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFM-TLNP---GTIPRMYHSTANLLPDGRVLI 376 (517)
Q Consensus 302 ~~~~~v~lpd-G~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~-~~~~---~~~~R~yhs~a~ll~dG~V~v 376 (517)
.. +....|| |+.+++|+.+ | .+.+||..+. +.. .+.. ...... . ..... |++.++
T Consensus 209 v~-~~~~~~~~~~~l~~~~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~~~~~v-~-~~~~~-~~~~l~ 268 (615)
T 1pgu_A 209 VR-DVEFSPDSGEFVITVGSD-R------------KISCFDGKSG---EFLKYIEDDQEPVQGGI-F-ALSWL-DSQKFA 268 (615)
T ss_dssp EE-EEEECSTTCCEEEEEETT-C------------CEEEEETTTC---CEEEECCBTTBCCCSCE-E-EEEES-SSSEEE
T ss_pred EE-EEEECCCCCCEEEEEeCC-C------------eEEEEECCCC---CEeEEecccccccCCce-E-EEEEc-CCCEEE
Confidence 22 3345588 9999998765 2 3688998776 432 2211 111111 1 12334 999999
Q ss_pred ecCCCc
Q 044265 377 AGSNPH 382 (517)
Q Consensus 377 ~GG~~~ 382 (517)
+|+.+.
T Consensus 269 ~~~~d~ 274 (615)
T 1pgu_A 269 TVGADA 274 (615)
T ss_dssp EEETTS
T ss_pred EEcCCC
Confidence 988654
No 153
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.18 E-value=0.49 Score=44.71 Aligned_cols=134 Identities=11% Similarity=0.087 Sum_probs=72.7
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEecc-CccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELD-DVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~-~~~m~~~R~~~s~~ 148 (517)
.+.+||+.......+.........+.++.++|++|+.... ...+.+||+. ........ ...+. .-.+++
T Consensus 101 ~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~----g~~~~~~~~~~~~~---~p~~i~ 170 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK---VMRVIIFDQN----GNVLHKFGCSKHLE---FPNGVV 170 (286)
T ss_dssp EEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT---TTEEEEECTT----SCEEEEEECTTTCS---SEEEEE
T ss_pred EEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECC---CCEEEEEcCC----CCEEEEeCCCCccC---CcEEEE
Confidence 4677885544333333222223344556789999998653 2679999986 33322220 01122 223566
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCce-EEEccCCcEEEEEC--C-ceEEEeCCCCe
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPY-VHLLPNGHLFIFAN--D-KAVMYDYETNK 221 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~-~~~~~~G~iyv~Gg--~-~~~~ydp~t~~ 221 (517)
.-++|++|+.... ...+.+| +.......... .. .-.+|. +++-++|+||+... + .+.+||+....
T Consensus 171 ~~~~g~l~v~~~~-~~~i~~~~~~g~~~~~~~~-~g------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 171 VNDKQEIFISDNR-AHCVKVFNYEGQYLRQIGG-EG------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL 240 (286)
T ss_dssp ECSSSEEEEEEGG-GTEEEEEETTCCEEEEESC-TT------TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE
T ss_pred ECCCCCEEEEECC-CCEEEEEcCCCCEEEEEcc-CC------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE
Confidence 6778999887543 2456677 53321111110 00 001332 44457999999873 3 78999986543
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.09 E-value=0.3 Score=47.19 Aligned_cols=112 Identities=8% Similarity=-0.011 Sum_probs=60.6
Q ss_pred ecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCc-EEEEcCCCCCceEEe-CCCCC
Q 044265 97 ILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGS-VIILGGKGANTVEYY-PPRNG 174 (517)
Q Consensus 97 ~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~-v~vvGG~~~~~~E~y-P~~~~ 174 (517)
+..++++|++++.. ..+.+||+. +.+.... -.+.....-...+..+||+ +|+.+ .....+.+| +.+.+
T Consensus 7 ~~~~~~~~v~~~~~---~~v~~~d~~----~~~~~~~--~~~~~~~~~~~~~~s~dg~~~~v~~-~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 7 LKAGHEYMIVTNYP---NNLHVVDVA----SDTVYKS--CVMPDKFGPGTAMMAPDNRTAYVLN-NHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCTTCEEEEEEETT---TEEEEEETT----TTEEEEE--EECSSCCSSCEEEECTTSSEEEEEE-TTTTEEEEEETTTTE
T ss_pred ccCCCEEEEEeCCC---CeEEEEECC----CCcEEEE--EecCCCCCCceeEECCCCCEEEEEe-CCCCcEEEEeCCCCc
Confidence 45678899988753 689999998 5544332 1222211234567778887 55554 333556777 55433
Q ss_pred ce-eccchhhccccccCCCC-ceEEEccCCcEEEEEC--------------CceEEEeCCCCe
Q 044265 175 AV-SFPFLADVEDKQMDNLY-PYVHLLPNGHLFIFAN--------------DKAVMYDYETNK 221 (517)
Q Consensus 175 w~-~~~~l~~t~~~~~~~~y-p~~~~~~~G~iyv~Gg--------------~~~~~ydp~t~~ 221 (517)
.. .... ..... ..... ....+.+||+.+++++ ..+.+||..+++
T Consensus 77 ~~~~~~~-~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 77 NTFHANL-SSVPG--EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEEEES-CCSTT--EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEEEEEc-ccccc--cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 22 1110 00000 00001 1356678997655554 678889987743
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.07 E-value=0.1 Score=50.63 Aligned_cols=141 Identities=14% Similarity=0.173 Sum_probs=77.1
Q ss_pred eEEEEECCCCCeEEccccCCC-cccceeecCCCc-EEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC-----cC
Q 044265 70 HSAILDLQTNQIRPLMILTDT-WCSSGQILADGT-VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN-----GR 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~-~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~-----~R 142 (517)
.+.+||+.+++....-..... .....++.+||+ +|+.+.. ...+.+||+. +.+-... ..+.. ..
T Consensus 22 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~----t~~~~~~--~~~~~~~~~~~~ 92 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD----TCKNTFH--ANLSSVPGEVGR 92 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT----TTEEEEE--EESCCSTTEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC----CCcEEEE--EEcccccccccc
Confidence 477899998876543222221 233455678887 5666533 2679999987 4443321 11211 11
Q ss_pred ccceeEEcCCCcEEEEcCCC-----------CCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC
Q 044265 143 WYGTDQILPDGSVIILGGKG-----------ANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN 209 (517)
Q Consensus 143 ~~~s~~~L~dG~v~vvGG~~-----------~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg 209 (517)
.-...+..+||+.+++++.+ ...+.+| ..+.+.. ...... .+.. -..+...+||++|+ ++
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~~-~~~~~~s~dg~l~~-~~ 165 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-----MPRQ-VYLMRAADDGSLYV-AG 165 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-----CCSS-CCCEEECTTSCEEE-ES
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-----CCCc-ccceeECCCCcEEE-cc
Confidence 12455677899877777643 2345566 4331111 000000 0111 11244668999777 55
Q ss_pred CceEEEeCCCCeEEEec
Q 044265 210 DKAVMYDYETNKIAREY 226 (517)
Q Consensus 210 ~~~~~ydp~t~~w~~~~ 226 (517)
..+.+||.++++....+
T Consensus 166 ~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 166 PDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp SSEEEECTTTCCEEEEE
T ss_pred CcEEEEeCCCCceeccc
Confidence 66999999988766444
No 156
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.01 E-value=1.3 Score=43.22 Aligned_cols=245 Identities=12% Similarity=0.086 Sum_probs=116.2
Q ss_pred ceeecCCCcEEEecCCCCC---------------------CCeEEEecCCCCCCCCceEecc-CccccCcCccceeEEcC
Q 044265 94 SGQILADGTVLQTGGDLDG---------------------YKKIRKFSPCEANGLCDWVELD-DVELVNGRWYGTDQILP 151 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g---------------------~~~v~~ydp~~~~~t~~W~~~~-~~~m~~~R~~~s~~~L~ 151 (517)
+.++.++|++||++..... ...+.+||+. +.+....- ...+. .-.++++-+
T Consensus 28 ~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~----~g~~~~~~~~~~~~---~p~gia~d~ 100 (329)
T 3fvz_A 28 GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN----NAEILQSSGKNLFY---LPHGLSIDT 100 (329)
T ss_dssp EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT----TCCEEEEECTTTCS---SEEEEEECT
T ss_pred EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC----CCeEEeccCCCccC---CceEEEECC
Confidence 4556788999988754310 1368999987 44443220 01122 223566778
Q ss_pred CCcEEEEcCCCCCceEEe-CCCCC-ce-eccchhhccccccCCCCce-EEEcc-CCcEEEEEC---CceEEEeCCCCeEE
Q 044265 152 DGSVIILGGKGANTVEYY-PPRNG-AV-SFPFLADVEDKQMDNLYPY-VHLLP-NGHLFIFAN---DKAVMYDYETNKIA 223 (517)
Q Consensus 152 dG~v~vvGG~~~~~~E~y-P~~~~-w~-~~~~l~~t~~~~~~~~yp~-~~~~~-~G~iyv~Gg---~~~~~ydp~t~~w~ 223 (517)
+|++|+....+ ..+..| +.... .. ..............-..|. +++.+ +|+||+..+ ..+.+||+.... .
T Consensus 101 ~g~l~v~d~~~-~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~-~ 178 (329)
T 3fvz_A 101 DGNYWVTDVAL-HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF-V 178 (329)
T ss_dssp TSCEEEEETTT-TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCE-E
T ss_pred CCCEEEEECCC-CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE-E
Confidence 99999876543 456666 54321 11 1110000000000011343 45556 899999873 468889965443 3
Q ss_pred EecCCCCC------CCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-C
Q 044265 224 REYPPLDG------GPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-D 296 (517)
Q Consensus 224 ~~~p~~p~------~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~ 296 (517)
..+..-.. .....| ...++-| ..++|||+...+ ..+.+||+. +.+.... .
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p--~gia~d~-----~~g~l~v~d~~~--------------~~I~~~~~~--~G~~~~~~~ 235 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVP--HSLALVP-----HLDQLCVADREN--------------GRIQCFKTD--TKEFVREIK 235 (329)
T ss_dssp EEECEECCSSSCCTTEESCE--EEEEEET-----TTTEEEEEETTT--------------TEEEEEETT--TCCEEEEEC
T ss_pred EEeccCCCCCCCCCcccCCC--cEEEEEC-----CCCEEEEEECCC--------------CEEEEEECC--CCcEEEEEe
Confidence 23321000 011122 1122222 138999986543 224455543 1222211 1
Q ss_pred C--CcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceecc-CCCCCccccccceeeecCCCc
Q 044265 297 M--PFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMT-LNPGTIPRMYHSTANLLPDGR 373 (517)
Q Consensus 297 m--~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~-~~~~~~~R~yhs~a~ll~dG~ 373 (517)
. ...+.. ....-| |.+|+..|.. ... +..-..+.+||+.+. +... +......-.+....++.+||.
T Consensus 236 ~~~~~~~~~-~~~~~p-g~~~~~~g~~-~v~-----~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 236 HASFGRNVF-AISYIP-GFLFAVNGKP-YFG-----DQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp CTTTTTCEE-EEEEET-TEEEEEECCC-CTT-----CSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEEEECTTSE
T ss_pred ccccCCCcc-eeeecC-CEEEEeCCCE-Eec-----cCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEEEECCCCC
Confidence 1 112222 212334 7777777653 111 111235788998876 4432 221111111112244579999
Q ss_pred EEEecCCC
Q 044265 374 VLIAGSNP 381 (517)
Q Consensus 374 V~v~GG~~ 381 (517)
|||+....
T Consensus 305 lyvad~~~ 312 (329)
T 3fvz_A 305 VYIGDAHT 312 (329)
T ss_dssp EEEEESSS
T ss_pred EEEEECCC
Confidence 99997643
No 157
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.00 E-value=1.3 Score=43.34 Aligned_cols=236 Identities=12% Similarity=0.103 Sum_probs=113.7
Q ss_pred CCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC-ccceeEEcCCCcEEE
Q 044265 79 NQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR-WYGTDQILPDGSVII 157 (517)
Q Consensus 79 ~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R-~~~s~~~L~dG~v~v 157 (517)
.+|+++.........+..+..++.++++|-. ..+..- .+ ...+|+... .....+. ...++..- ++++|+
T Consensus 25 ~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~----g~i~~s--~D--gG~tW~~~~-~~~~~~~~~~~~i~~~-~~~~~~ 94 (327)
T 2xbg_A 25 NPWEAIQLPTTATILDMSFIDRHHGWLVGVN----ATLMET--RD--GGQTWEPRT-LVLDHSDYRFNSVSFQ-GNEGWI 94 (327)
T ss_dssp CCEEEEECSCSSCEEEEEESSSSCEEEEETT----TEEEEE--SS--TTSSCEECC-CCCSCCCCEEEEEEEE-TTEEEE
T ss_pred CCceEeecCCCCcEEEEEECCCCcEEEEcCC----CeEEEe--CC--CCCCCeECC-CCCCCCCccEEEEEec-CCeEEE
Confidence 5677765433332233344456788887632 123222 21 156899871 1121222 23444444 578888
Q ss_pred EcCCCCCceEEe-CC--CCCceeccchhhccccccCCCCceEEEccCCcEEEEECCceEEEe-C-CCCeEEEecCCCCCC
Q 044265 158 LGGKGANTVEYY-PP--RNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFANDKAVMYD-Y-ETNKIAREYPPLDGG 232 (517)
Q Consensus 158 vGG~~~~~~E~y-P~--~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~~~~~yd-p-~t~~w~~~~p~~p~~ 232 (517)
+|- .. .+| .. -.+|........ .+...+ ......++++|+.+.... +|- . ...+|+....+.+
T Consensus 95 ~g~-~g---~i~~S~DgG~tW~~~~~~~~----~~~~~~-~i~~~~~~~~~~~~~~g~-v~~S~DgG~tW~~~~~~~~-- 162 (327)
T 2xbg_A 95 VGE-PP---IMLHTTDGGQSWSQIPLDPK----LPGSPR-LIKALGNGSAEMITNVGA-IYRTKDSGKNWQALVQEAI-- 162 (327)
T ss_dssp EEE-TT---EEEEESSTTSSCEECCCCTT----CSSCEE-EEEEEETTEEEEEETTCC-EEEESSTTSSEEEEECSCC--
T ss_pred EEC-CC---eEEEECCCCCCceECccccC----CCCCeE-EEEEECCCCEEEEeCCcc-EEEEcCCCCCCEEeecCCC--
Confidence 752 21 344 22 356875432110 001112 233346789998886432 332 2 2457985322111
Q ss_pred CCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCC-CCCceecCCCcceeeeeeEEecC
Q 044265 233 PRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSA-DPTWEMEDMPFGRIMGDMVMLPT 311 (517)
Q Consensus 233 ~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~-~~~W~~~~m~~~R~~~~~v~lpd 311 (517)
... ...+..+ +++++++|-.. ..+ .-.+. ...|+....+..+.....+..++
T Consensus 163 -~~~---~~~~~~~------~~~~~~~g~~G-~~~----------------~S~d~gG~tW~~~~~~~~~~~~~~~~~~~ 215 (327)
T 2xbg_A 163 -GVM---RNLNRSP------SGEYVAVSSRG-SFY----------------STWEPGQTAWEPHNRTTSRRLHNMGFTPD 215 (327)
T ss_dssp -CCE---EEEEECT------TSCEEEEETTS-SEE----------------EEECTTCSSCEEEECCSSSCEEEEEECTT
T ss_pred -cce---EEEEEcC------CCcEEEEECCC-cEE----------------EEeCCCCCceeECCCCCCCccceeEECCC
Confidence 111 1122222 57777766321 111 11222 46898764344444555556689
Q ss_pred CcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCC--CCccccccceeeecCCCcEEEecCC
Q 044265 312 GDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNP--GTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 312 G~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~--~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
|++|+++.. |. +.+.+ ++.|++|+.+.. ++.....++.+ ..+++++|++|+.
T Consensus 216 g~~~~~~~~--G~------------~~~s~--~D~G~tW~~~~~~~~~~~~~~~~v~-~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 216 GRLWMIVNG--GK------------IAFSD--PDNSENWGELLSPLRRNSVGFLDLA-YRTPNEVWLAGGA 269 (327)
T ss_dssp SCEEEEETT--TE------------EEEEE--TTEEEEECCCBCTTSSCCSCEEEEE-ESSSSCEEEEEST
T ss_pred CCEEEEeCC--ce------------EEEec--CCCCCeeEeccCCcccCCcceEEEE-ecCCCEEEEEeCC
Confidence 999987642 21 12222 234669987642 22222223322 3578999998874
No 158
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.25 Score=48.46 Aligned_cols=140 Identities=11% Similarity=0.106 Sum_probs=82.3
Q ss_pred eEEEEECCCCCeEEccc-cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceE--eccCccccCcCccce
Q 044265 70 HSAILDLQTNQIRPLMI-LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWV--ELDDVELVNGRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~--~~~~~~m~~~R~~~s 146 (517)
.+.+||..+++...... .+...+...++.+||.++++|+.+ ..+++||.. +.+-. .. .......-.+
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d---g~i~iwd~~----~~~~~~~~~---~~~h~~~v~~ 219 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD---GILDVYNLS----SPDQASSRF---PVDEEAKIKE 219 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT---SCEEEEESS----CTTSCCEEC---CCCTTSCEEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC----CCCCCccEE---eccCCCCEEE
Confidence 47899999888754432 233335556778899999999864 689999988 33322 22 1112233456
Q ss_pred eEEcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEE--E-CCceEEEeCC--C
Q 044265 147 DQILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIF--A-NDKAVMYDYE--T 219 (517)
Q Consensus 147 ~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~--G-g~~~~~ydp~--t 219 (517)
++..++|+.++.|+ +. ++.+| .....-. ....+... . .+... ..+...++|+.++. + +..+.+|+.. .
T Consensus 220 l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 220 VKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTLAYPTYTIP-E-FKTGT-VTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEECTTSSEEEEEE-SS-BEEEEETTSSTTCBSSCCCBC-------CC-EEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEeCCCCEEEEEe-CC-eEEEEEcCCCCcceeecccccc-c-ccccc-eEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 66778999999888 33 78888 4432211 11110000 0 00000 12555679998888 4 4567888874 4
Q ss_pred CeEEE
Q 044265 220 NKIAR 224 (517)
Q Consensus 220 ~~w~~ 224 (517)
..|..
T Consensus 295 ~~~~~ 299 (343)
T 3lrv_A 295 KNWTK 299 (343)
T ss_dssp CSEEE
T ss_pred cceEe
Confidence 56763
No 159
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.92 E-value=0.43 Score=48.52 Aligned_cols=137 Identities=10% Similarity=0.129 Sum_probs=80.0
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++...+.... ......++.+||+.+++.+..++...+++||.. +.+...+ .. ......+.+.
T Consensus 204 ~i~~~d~~tg~~~~l~~~~-~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~----~~~~~~l--~~--~~~~~~~~~~ 274 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFP-RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA----SGQIRQV--TD--GRSNNTEPTW 274 (415)
T ss_dssp EEEEEETTTCCEEEEECCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT----TCCEEEC--CC--CSSCEEEEEE
T ss_pred EEEEEECCCCcEEEeecCC-CcccCEEEcCCCCEEEEEEecCCCceEEEEECC----CCCEEeC--cC--CCCcccceEE
Confidence 5789999999887654332 234455678899966644433455679999987 5555544 11 1223345566
Q ss_pred cCCCcEEEEcCCCCCceEEe---CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-----CceEEEeCCCCe
Q 044265 150 LPDGSVIILGGKGANTVEYY---PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-----DKAVMYDYETNK 221 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y---P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-----~~~~~ydp~t~~ 221 (517)
.+||+.++++........+| ..+......... ..........+||+.++++. ..+.+||..+++
T Consensus 275 spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~--------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 275 FPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE--------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS--------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC--------CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 78999777665433333343 333322211110 00111245568998776654 257889999887
Q ss_pred EE
Q 044265 222 IA 223 (517)
Q Consensus 222 w~ 223 (517)
..
T Consensus 347 ~~ 348 (415)
T 2hqs_A 347 VQ 348 (415)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 160
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.88 E-value=1.5 Score=44.55 Aligned_cols=141 Identities=12% Similarity=0.128 Sum_probs=79.0
Q ss_pred eEEEEECC--CCCeEEccc--cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEe-ccCcccc-CcCc
Q 044265 70 HSAILDLQ--TNQIRPLMI--LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVE-LDDVELV-NGRW 143 (517)
Q Consensus 70 ~~~~yDp~--t~~w~~l~~--~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~-~~~~~m~-~~R~ 143 (517)
.+.+||.. +++....-. .+...+.+.++.++|+.+++|+.+ ..+.+||... ..... . ...+. ....
T Consensus 126 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~~----~~~~~~~-~~~~~~h~~~ 197 (450)
T 2vdu_B 126 SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDINS----IPEEKFT-QEPILGHVSM 197 (450)
T ss_dssp EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETTS----CCCSSCC-CCCSEECSSC
T ss_pred eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecCC----ccccccc-ceeeecccCc
Confidence 47789987 555443322 223344456677899999999763 5678888762 22111 0 01121 1223
Q ss_pred cceeEEcCC---CcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeC
Q 044265 144 YGTDQILPD---GSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDY 217 (517)
Q Consensus 144 ~~s~~~L~d---G~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp 217 (517)
-.+++..+| ++.++.|+.+ .++.+| ..+..... ..+... . ..-..+... +|++++.|+. .+.+||.
T Consensus 198 v~~~~~sp~~~~~~~l~s~~~d-~~i~vwd~~~~~~~~-~~~~~h----~-~~v~~~~~s-d~~~l~s~~~d~~v~vwd~ 269 (450)
T 2vdu_B 198 LTDVHLIKDSDGHQFIITSDRD-EHIKISHYPQCFIVD-KWLFGH----K-HFVSSICCG-KDYLLLSAGGDDKIFAWDW 269 (450)
T ss_dssp EEEEEEEECTTSCEEEEEEETT-SCEEEEEESCTTCEE-EECCCC----S-SCEEEEEEC-STTEEEEEESSSEEEEEET
T ss_pred eEEEEEcCCCCCCcEEEEEcCC-CcEEEEECCCCceee-eeecCC----C-CceEEEEEC-CCCEEEEEeCCCeEEEEEC
Confidence 345566778 8888888765 467777 43332211 001000 0 001123444 8998888874 6889999
Q ss_pred CCCeEEEec
Q 044265 218 ETNKIAREY 226 (517)
Q Consensus 218 ~t~~w~~~~ 226 (517)
.+++....+
T Consensus 270 ~~~~~~~~~ 278 (450)
T 2vdu_B 270 KTGKNLSTF 278 (450)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEeeee
Confidence 988765444
No 161
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.74 E-value=0.18 Score=50.02 Aligned_cols=137 Identities=9% Similarity=0.032 Sum_probs=75.1
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCC-cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-Ccccee
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADG-TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~~s~ 147 (517)
.+.+||..+++-......|........+.+++ .+++.|+.+ ..+++||.. +.+-... -..... ....++
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~----~~~~~~~--~~~~~~~~~~~~~ 220 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTR----CPKPASQ--IGCSAPGYLPTSL 220 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETT----SSSCEEE--CC----CCCEEEE
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc---ccccccccc----ccceeee--eecceeeccceee
Confidence 47899998877654434444443445566776 588888864 679999987 3332211 011111 112234
Q ss_pred EEcC-CCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCC-cEEEEEC--CceEEEeCCCCeE
Q 044265 148 QILP-DGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNG-HLFIFAN--DKAVMYDYETNKI 222 (517)
Q Consensus 148 ~~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G-~iyv~Gg--~~~~~ydp~t~~w 222 (517)
+..+ ++++++.|+.+ .++.+| ..+.+-.. .+.. + ...-..+...++| ++++.|+ ..+.+||..+++-
T Consensus 221 ~~~p~~~~~l~sg~~d-g~v~~wd~~~~~~~~--~~~~----h-~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 221 AWHPQQSEVFVFGDEN-GTVSLVDTKSTSCVL--SSAV----H-SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp EECSSCTTEEEEEETT-SEEEEEESCC--CCE--EEEC----C-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred eecCCCCcceEEeccC-CcEEEEECCCCcEEE--EEcC----C-CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 4444 56788877755 467777 54332210 0110 0 0011124455777 5666665 4688999988865
Q ss_pred E
Q 044265 223 A 223 (517)
Q Consensus 223 ~ 223 (517)
.
T Consensus 293 ~ 293 (344)
T 4gqb_B 293 F 293 (344)
T ss_dssp E
T ss_pred E
Confidence 4
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.65 E-value=0.99 Score=44.58 Aligned_cols=140 Identities=9% Similarity=-0.048 Sum_probs=70.0
Q ss_pred eEEEEECCCCCeEEcccc---CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 70 HSAILDLQTNQIRPLMIL---TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~---~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
....+|+.+++.+.+... ....+...++.+||+.+.++... .+.+||... +.+.... ......-.-..
T Consensus 17 ~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~----~v~~~~~~~---~g~~~~~--~~~~~~g~~~~ 87 (365)
T 1jof_A 17 FTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK----KWSSFAVKS---PTEIVHE--ASHPIGGHPRA 87 (365)
T ss_dssp EEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT----EEEEEEEEE---TTEEEEE--EEEECCSSGGG
T ss_pred EEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc----eEEEEEECC---CCCEEEe--eEeecCCCCcc
Confidence 355678888888766432 22234556677899866555442 788898641 1222221 11110011223
Q ss_pred eEEcCCCcE-EE-EcC--------C----CCCceEEe-CCCC-Cce-eccchhhccccccCCCCc-eEEEccCCc-EEEE
Q 044265 147 DQILPDGSV-II-LGG--------K----GANTVEYY-PPRN-GAV-SFPFLADVEDKQMDNLYP-YVHLLPNGH-LFIF 207 (517)
Q Consensus 147 ~~~L~dG~v-~v-vGG--------~----~~~~~E~y-P~~~-~w~-~~~~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~ 207 (517)
++..+||+. |+ ++. . ...++.+| ...+ +.. ...... . . ....+ .+.+.+||+ ||+.
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~--~--~-~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE--Y--Q-ENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE--C--C-TTCCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE--e--C-CCCcceEEEECCCCCEEEEE
Confidence 556678983 33 332 0 23456777 3322 221 111100 0 0 01122 345668997 5544
Q ss_pred E--CCceEEEeCC-CCeEE
Q 044265 208 A--NDKAVMYDYE-TNKIA 223 (517)
Q Consensus 208 G--g~~~~~ydp~-t~~w~ 223 (517)
. ...+.+||.. +++..
T Consensus 163 ~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp ETTTTEEEEEEECTTSCEE
T ss_pred cCCCCEEEEEEECCCCCEE
Confidence 3 3578899987 66643
No 163
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.62 E-value=0.85 Score=44.03 Aligned_cols=137 Identities=11% Similarity=0.064 Sum_probs=72.1
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCC-CCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDL-DGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~-~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.+||+.+++++.+.........+.+..+||++++..... .....+.+||+. +......- ........-...+
T Consensus 67 ~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~----~~~~~~~~-~~~~~~~~~~~i~ 141 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN----GDNLQDII-EDLSTAYCIDDMV 141 (333)
T ss_dssp EEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT----SCSCEEEE-CSSSSCCCEEEEE
T ss_pred EEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC----CCEEEEEE-ccCccCCcccceE
Confidence 36789999998876543222333344556799998876432 112578999987 44433210 1111222334566
Q ss_pred EcCCCcEEEEcCCC-----CCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCc-EEEEEC--CceEEEeCCC
Q 044265 149 ILPDGSVIILGGKG-----ANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DKAVMYDYET 219 (517)
Q Consensus 149 ~L~dG~v~vvGG~~-----~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~~~~ydp~t 219 (517)
.-++|++|+..... ...+.++ +...+..... ... ..-....+.+||+ ||+... ..+.+||..+
T Consensus 142 ~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~------~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 142 FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII--QNI------SVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp ECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE--EEE------SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee--cCC------CcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 77899998865321 1123334 4433332210 000 0011244557886 776653 4677787753
No 164
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.60 E-value=1.6 Score=41.24 Aligned_cols=138 Identities=12% Similarity=-0.008 Sum_probs=77.9
Q ss_pred eEEEEECCCCCeEEccccC-CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILT-DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+..+|++|++...-.... ..|.. +..+.+++||++.... +.+.+||+. +.+-.. ..+.+....+.+
T Consensus 44 ~v~~vD~~tgkv~~~~~l~~~~fge-Gi~~~~~~ly~ltw~~---~~v~v~D~~----tl~~~~----ti~~~~~Gwglt 111 (243)
T 3mbr_X 44 SVRKVDLETGRILQRAEVPPPYFGA-GIVAWRDRLIQLTWRN---HEGFVYDLA----TLTPRA----RFRYPGEGWALT 111 (243)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEE-EEEEETTEEEEEESSS---SEEEEEETT----TTEEEE----EEECSSCCCEEE
T ss_pred eEEEEECCCCCEEEEEeCCCCccee-EEEEeCCEEEEEEeeC---CEEEEEECC----cCcEEE----EEeCCCCceEEe
Confidence 5789999999987644444 44443 4455688999986543 789999998 443322 223222223444
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCCCeEEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYETNKIAR 224 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t~~w~~ 224 (517)
.- ++++|+.=| ...+.++ |.+.+-. ..+. ..+..+.. +.--....+|+||+-- .+.+.+.||++++...
T Consensus 112 ~d-g~~L~vSdg--s~~l~~iDp~t~~~~~~I~V---~~~g~~~~-~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 112 SD-DSHLYMSDG--TAVIRKLDPDTLQQVGSIKV---TAGGRPLD-NLNELEWVNGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp EC-SSCEEEECS--SSEEEEECTTTCCEEEEEEC---EETTEECC-CEEEEEEETTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred eC-CCEEEEECC--CCeEEEEeCCCCeEEEEEEE---ccCCcccc-cceeeEEeCCEEEEEECCCCeEEEEECCCCCEEE
Confidence 32 456777655 2346666 7764432 1111 00000000 0001122499999764 3578899999998775
Q ss_pred ec
Q 044265 225 EY 226 (517)
Q Consensus 225 ~~ 226 (517)
.+
T Consensus 185 ~i 186 (243)
T 3mbr_X 185 WI 186 (243)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 165
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.60 E-value=2 Score=42.39 Aligned_cols=244 Identities=10% Similarity=0.100 Sum_probs=115.3
Q ss_pred eEEEEECCCCC--eEEccccC-------CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC
Q 044265 70 HSAILDLQTNQ--IRPLMILT-------DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN 140 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~~~-------~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~ 140 (517)
.+..||+++++ |+.-.... .....+...+.+++||+.... ..+..||+.++ +..|... +..
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~----g~l~a~d~~tG--~~~W~~~----~~~ 133 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK----AQVYALNTSDG--TVAWQTK----VAG 133 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT----SEEEEEETTTC--CEEEEEE----CSS
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC----CEEEEEECCCC--CEEEEEe----CCC
Confidence 36788988876 54322111 112223344567888875432 57899999843 5568653 221
Q ss_pred cCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCC--ceeccchhhccccccCCCCceEEEccCCcEEEEEC-CceEEEe
Q 044265 141 GRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNG--AVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-DKAVMYD 216 (517)
Q Consensus 141 ~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~--w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-~~~~~yd 216 (517)
. ...+.+ +.+|+||+... + ..+-.| +.+.+ |....... .. ..... ...+..+|.||+... ..+..||
T Consensus 134 ~-~~~~p~-~~~~~v~v~~~-~-g~l~~~d~~tG~~~W~~~~~~~-~~---~~~~~-~~~~~~~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 134 E-ALSRPV-VSDGLVLIHTS-N-GQLQALNEADGAVKWTVNLDMP-SL---SLRGE-SAPTTAFGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp C-CCSCCE-EETTEEEEECT-T-SEEEEEETTTCCEEEEEECCC---------CCC-CCCEEETTEEEECCTTTEEEEEE
T ss_pred c-eEcCCE-EECCEEEEEcC-C-CeEEEEECCCCcEEEEEeCCCC-ce---eecCC-CCcEEECCEEEEEcCCCEEEEEE
Confidence 1 122223 33787777543 2 234455 55433 54211000 00 00000 111233777777543 3578899
Q ss_pred CCCC--eEEEecCCCCCCC----CCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCC
Q 044265 217 YETN--KIAREYPPLDGGP----RNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADP 290 (517)
Q Consensus 217 p~t~--~w~~~~p~~p~~~----r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~ 290 (517)
++++ .|....+. +... +.....+..++ .++.||+.+. + + .+.++|+.....
T Consensus 205 ~~tG~~~w~~~~~~-~~~~~~~~~~~~~~~~p~~-------~~~~v~~~~~-~-g-------------~l~~~d~~tG~~ 261 (376)
T 3q7m_A 205 MEQGQMIWQQRISQ-ATGSTEIDRLSDVDTTPVV-------VNGVVFALAY-N-G-------------NLTALDLRSGQI 261 (376)
T ss_dssp TTTCCEEEEEECCC------------CCCCCCEE-------ETTEEEEECT-T-S-------------CEEEEETTTCCE
T ss_pred CCCCcEEEEEeccc-CCCCcccccccccCCCcEE-------ECCEEEEEec-C-c-------------EEEEEECCCCcE
Confidence 9876 45543221 1000 00000012222 2677777642 2 1 234566654345
Q ss_pred CceecCCCcceeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecC
Q 044265 291 TWEMEDMPFGRIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLP 370 (517)
Q Consensus 291 ~W~~~~m~~~R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~ 370 (517)
.|+.. ... ... .++.+++||+.... + .+.+||+++.. ..|+.-. .. .+... +.++.
T Consensus 262 ~w~~~-~~~---~~~-~~~~~~~l~~~~~~--g------------~l~~~d~~tG~-~~w~~~~-~~-~~~~~--~~~~~ 317 (376)
T 3q7m_A 262 MWKRE-LGS---VND-FIVDGNRIYLVDQN--D------------RVMALTIDGGV-TLWTQSD-LL-HRLLT--SPVLY 317 (376)
T ss_dssp EEEEC-CCC---EEE-EEEETTEEEEEETT--C------------CEEEEETTTCC-EEEEECT-TT-TSCCC--CCEEE
T ss_pred Eeecc-CCC---CCC-ceEECCEEEEEcCC--C------------eEEEEECCCCc-EEEeecc-cC-CCccc--CCEEE
Confidence 67754 111 122 34458888886432 1 25789998762 3576431 11 12222 22235
Q ss_pred CCcEEEecC
Q 044265 371 DGRVLIAGS 379 (517)
Q Consensus 371 dG~V~v~GG 379 (517)
+++||+...
T Consensus 318 ~~~l~v~~~ 326 (376)
T 3q7m_A 318 NGNLVVGDS 326 (376)
T ss_dssp TTEEEEECT
T ss_pred CCEEEEEeC
Confidence 778777643
No 166
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.54 E-value=0.78 Score=45.29 Aligned_cols=103 Identities=10% Similarity=0.131 Sum_probs=54.6
Q ss_pred cceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEE-EEcCCCCCceEEe-C
Q 044265 93 SSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVI-ILGGKGANTVEYY-P 170 (517)
Q Consensus 93 ~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~-vvGG~~~~~~E~y-P 170 (517)
.+.++.+||+++++|+. +.+++||.. +.+-.. ..... .......++++..+ ++|+.+ .++.+| .
T Consensus 23 ~~v~fs~dg~~la~g~~----~~~~iw~~~----~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~d-~~v~iWd~ 88 (355)
T 3vu4_A 23 TDYEFNQDQSCLILSTL----KSFEIYNVH----PVAHIM----SQEMR-HLSKVRMLHRTNYVAFVTGVK-EVVHIWDD 88 (355)
T ss_dssp CEEEECTTSSEEEEECS----SEEEEEEET----TEEEEE----EEECS-CCCEEEECTTSSEEEEECSST-TEEEEEET
T ss_pred EEEEECCCCCEEEEEcC----CEEEEEecC----Ccceee----eeecC-CeEEEEEcCCCCEEEEEECCc-cEEEEEEC
Confidence 34567789999999875 346789865 222111 11111 12334555666666 445544 578888 5
Q ss_pred CCCCce-eccchhhccccccCCCCceEEEc-cCCcEEEEECCceEEEeCCCC
Q 044265 171 PRNGAV-SFPFLADVEDKQMDNLYPYVHLL-PNGHLFIFANDKAVMYDYETN 220 (517)
Q Consensus 171 ~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~-~~G~iyv~Gg~~~~~ydp~t~ 220 (517)
.+.+.. .... . .+-..+. ....+++.....+.+||..+.
T Consensus 89 ~~~~~~~~~~~-~----------~~v~~v~~~~~~~~~~~~~~i~i~d~~~~ 129 (355)
T 3vu4_A 89 VKKQDVSRIKV-D----------APVKDLFLSREFIVVSYGDVISVFKFGNP 129 (355)
T ss_dssp TTTEEEEEEEC-S----------SCEEEEEECSSEEEEEETTEEEEEESSTT
T ss_pred CCCcEEEEEEC-C----------CceEEEEEcCCEEEEEEcCEEEEEECCCC
Confidence 543322 1110 0 0111222 233455556677889998876
No 167
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.52 E-value=1.6 Score=40.85 Aligned_cols=132 Identities=14% Similarity=0.117 Sum_probs=72.0
Q ss_pred eEEEEECCCCCeEEcccc-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCcccee
Q 044265 70 HSAILDLQTNQIRPLMIL-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~ 147 (517)
.+..||+. ++++..... ......+.++..+|++|+.... ...+.+||+. .+.... .++ ....-.+.
T Consensus 84 ~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-----g~~~~~---~~~~~~~~~~~i 151 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD-----GTIYEY---DLPNKGSYPAFI 151 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT-----SCEEEE---ECSSTTCCEEEE
T ss_pred eEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC-----CCEEEc---cCCCCCCCceeE
Confidence 36678888 777654432 1222334445678999988643 2578889986 223322 111 11223345
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCce-EEEccCCcEEEEEC--CceEEEeCCCCeEE
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPY-VHLLPNGHLFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~-~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
+.-++|++|+.... ...+.+| + ..+...... .. ...+|. ..+-++|+||+... ..+.+||+ ++++.
T Consensus 152 ~~d~~g~l~v~~~~-~~~i~~~~~-~g~~~~~~~-~~------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 152 TLGSDNALWFTENQ-NNSIGRITN-TGKLEEYPL-PT------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp EECTTSSEEEEETT-TTEEEEECT-TCCEEEEEC-SS------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred EECCCCCEEEEecC-CCeEEEECC-CCcEEEeeC-CC------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 56678998886532 2345566 5 433332111 00 011232 33446899998863 46889999 55554
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.50 E-value=1.9 Score=41.50 Aligned_cols=114 Identities=8% Similarity=-0.051 Sum_probs=64.7
Q ss_pred cceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCC---CCceEEe
Q 044265 93 SSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKG---ANTVEYY 169 (517)
Q Consensus 93 ~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~---~~~~E~y 169 (517)
.+.++..+|+||+++... ..+.+||+. +.+.... .. .....-.+.+.-+||++|+....+ ...+-+|
T Consensus 48 ~~~~~~~~g~l~~~~~~~---~~i~~~d~~----~~~~~~~--~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFE---GNIFKINPE----TKEIKRP--FV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp EEEEECTTSCEEEEETTT---CEEEEECTT----TCCEEEE--EE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred cCcEECCCCCEEEEECCC---CEEEEEeCC----CCcEEEE--ee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 345566899999887643 579999998 5666543 11 112223445566799998875432 1245556
Q ss_pred -CCCCCce-eccchhhccccccCCCCc-eEEEccCCcEEEEEC--------CceEEEeCCCCeEE
Q 044265 170 -PPRNGAV-SFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN--------DKAVMYDYETNKIA 223 (517)
Q Consensus 170 -P~~~~w~-~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg--------~~~~~ydp~t~~w~ 223 (517)
+.+.... ...... ....+ ...+.++|++|+... ..+.+||+.+++..
T Consensus 118 d~~~~~~~~~~~~~~-------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 118 TENGDNLQDIIEDLS-------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp CTTSCSCEEEECSSS-------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred eCCCCEEEEEEccCc-------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 5443322 111000 01122 245567999998764 24677788776654
No 169
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.50 E-value=1.8 Score=41.13 Aligned_cols=113 Identities=9% Similarity=-0.036 Sum_probs=61.0
Q ss_pred ceeecCCCcEEEe-------cCCCCCCCeEEEecCCCCCCCCceEeccCcc--cc-CcCccceeEEcCC-CcEEEEcCCC
Q 044265 94 SGQILADGTVLQT-------GGDLDGYKKIRKFSPCEANGLCDWVELDDVE--LV-NGRWYGTDQILPD-GSVIILGGKG 162 (517)
Q Consensus 94 ~~~~l~dG~l~v~-------GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~--m~-~~R~~~s~~~L~d-G~v~vvGG~~ 162 (517)
+.++..+|++|++ +.. ...+.+||+. +.++... .. .. ....-.+++.-++ |++|+....+
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~----~g~~~~~--~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKP---AGEILRIDLK----TGKKTVI--CKPEVNGYGGIPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEE---CCEEEEECTT----TCCEEEE--ECCEETTEECCEEEEEECSSSSEEEEEETTT
T ss_pred CceECCCCCEEEEEeccccCCCC---CCEEEEEeCC----CCcEEEE--EecccCCCCCCCceEEEecCCCcEEEEECCC
Confidence 3445578999988 322 2578999987 5666544 11 00 1122345566678 8998876422
Q ss_pred CCceEEe-CCCCCceec-cchhhccccccCCCCc-eEEEccCCcEEEEEC-----------------CceEEEeCCCCeE
Q 044265 163 ANTVEYY-PPRNGAVSF-PFLADVEDKQMDNLYP-YVHLLPNGHLFIFAN-----------------DKAVMYDYETNKI 222 (517)
Q Consensus 163 ~~~~E~y-P~~~~w~~~-~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~Gg-----------------~~~~~ydp~t~~w 222 (517)
.+.+| +. .+.... ...... .+. ..+ ...+-++|++|+... ..+.+||+. ++.
T Consensus 93 --~l~~~d~~-g~~~~~~~~~~~~---~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 93 --GLLVVQTD-GTFEEIAKKDSEG---RRM-QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp --EEEEEETT-SCEEECCSBCTTS---CBC-BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred --CEEEEeCC-CCEEEEEeccCCC---ccc-cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence 45566 55 443322 110000 000 112 345557999998764 246777876 554
Q ss_pred E
Q 044265 223 A 223 (517)
Q Consensus 223 ~ 223 (517)
.
T Consensus 165 ~ 165 (314)
T 1pjx_A 165 I 165 (314)
T ss_dssp E
T ss_pred E
Confidence 4
No 170
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.38 E-value=0.33 Score=46.73 Aligned_cols=138 Identities=9% Similarity=0.123 Sum_probs=76.0
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+.+.......+.....+.++.+||+++++|+.+ ..+++||.. +.+ .. ..+.......+++.
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---g~i~iwd~~----~~~--~~--~~~~~~~~v~~~~~ 264 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD---GQAMLWDLN----EGK--HL--YTLDGGDIINALCF 264 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---CEEEEEETT----TTE--EE--EEEECSSCEEEEEE
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC---CeEEEEEec----cCc--ee--eeecCCceEEeeec
Confidence 47789998877655444454444455677899999999875 689999987 332 22 22333333445556
Q ss_pred cCCCcEEEEcCCCCCceEEe-CCCCCce-ec--cchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCCCe
Q 044265 150 LPDGSVIILGGKGANTVEYY-PPRNGAV-SF--PFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYETNK 221 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~--~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t~~ 221 (517)
.+++.+ ++++.+ ..+.+| ....... .. ........... ..--.+...+||+.++.|+. .+.+||.++++
T Consensus 265 ~~~~~~-~~~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 265 SPNRYW-LCAATG-PSIKIWDLEGKIIVDELKQEVISTSSKAEP-PQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CSSSSE-EEEEET-TEEEEEETTTTEEEEEECCC-------CCC-CCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCce-eeccCC-CEEEEEECCCCeEEEeccccceeeeccCCC-CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 666655 445543 456666 3322111 11 00000000000 00112445689998888874 58889987764
No 171
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.33 E-value=0.6 Score=47.38 Aligned_cols=136 Identities=11% Similarity=0.016 Sum_probs=65.7
Q ss_pred CCCCCeEEcc-ccCCCcccceeecCC-CcEEEecCCCCCCCeEEEecCCCCCC----CCceEeccCcccc-CcCccceeE
Q 044265 76 LQTNQIRPLM-ILTDTWCSSGQILAD-GTVLQTGGDLDGYKKIRKFSPCEANG----LCDWVELDDVELV-NGRWYGTDQ 148 (517)
Q Consensus 76 p~t~~w~~l~-~~~~~~c~~~~~l~d-G~l~v~GG~~~g~~~v~~ydp~~~~~----t~~W~~~~~~~m~-~~R~~~s~~ 148 (517)
..+.+..... ..+........+.++ ++++++|+.+ ..+.+||...... ....... ..+. ....-.+++
T Consensus 114 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~d---g~V~vwd~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~l~ 188 (430)
T 2xyi_A 114 SVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPS---SDVLVFDYTKHPSKPEPSGECQPD--LRLRGHQKEGYGLS 188 (430)
T ss_dssp ----CEEEEEEEEESSCCSEEEEETTEEEEEEEECSS---SCEEEEEGGGSCSSCCTTCCCCCS--EEEECCSSCCCCEE
T ss_pred CCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCC---CcEEEEECCCcccccCccccCCCc--EEecCCCCCeEEEE
Confidence 4444554332 223333334556675 6788888764 4688998762100 0112221 1122 122234566
Q ss_pred EcCCCc-EEEEcCCCCCceEEe-CCCC---CceeccchhhccccccCCCCceEEEcc-CCcEEEEEC--CceEEEeCCCC
Q 044265 149 ILPDGS-VIILGGKGANTVEYY-PPRN---GAVSFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 149 ~L~dG~-v~vvGG~~~~~~E~y-P~~~---~w~~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~Gg--~~~~~ydp~t~ 220 (517)
..++++ +++.|+.+ ..+.+| .... .+...+.. .... + ...-..+...+ ++++|+.++ ..+.+||..+.
T Consensus 189 ~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~~-~~~~-h-~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 189 WNPNLNGYLLSASDD-HTICLWDINATPKEHRVIDAKN-IFTG-H-TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp ECTTSTTEEEEECTT-SCEEEEETTSCCBGGGEEECSE-EECC-C-SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred eCCCCCCeEEEEeCC-CeEEEEeCCCCCCCCceeccce-eecC-C-CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 777787 88888765 457777 4331 12111100 0000 0 00011233445 678888875 46889999865
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.27 E-value=1.2 Score=42.32 Aligned_cols=136 Identities=13% Similarity=0.065 Sum_probs=78.4
Q ss_pred eEEEEECCCCCeEEcccc----CCCcccceeecCCCcEEEe----cCCC----------CCCCeEEEecCCCCCCCCceE
Q 044265 70 HSAILDLQTNQIRPLMIL----TDTWCSSGQILADGTVLQT----GGDL----------DGYKKIRKFSPCEANGLCDWV 131 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~l~v~----GG~~----------~g~~~v~~ydp~~~~~t~~W~ 131 (517)
.+.+||+.+++.+.+... ...+....++.++|++|++ |... .+...+..||+. .+..
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-----g~~~ 165 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-----GTLS 165 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-----SCEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-----CCEE
Confidence 477899989988766432 1123345667889999997 4310 123478888875 2232
Q ss_pred eccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CC-CCCc-eeccchhhccccccCCCCc-eEEEccCCcEEEE
Q 044265 132 ELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PP-RNGA-VSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIF 207 (517)
Q Consensus 132 ~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~-~~~w-~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~ 207 (517)
.. ...+. .-.+.+.-+||+++ +.......+.+| .. .... .....+ ... ..+| .+.+-++|+||+.
T Consensus 166 ~~-~~~~~---~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~-----~~~p~~i~~d~~G~l~v~ 234 (296)
T 3e5z_A 166 AP-IRDRV---KPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVE-----PGKTDGLRVDAGGLIWAS 234 (296)
T ss_dssp EE-ECCCS---SEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCS-----SSCCCSEEEBTTSCEEEE
T ss_pred Ee-ecCCC---CCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCC-----CCCCCeEEECCCCCEEEE
Confidence 22 01222 22456677899998 554444567777 43 2222 111111 000 1122 3555679999999
Q ss_pred ECCceEEEeCCCCe
Q 044265 208 ANDKAVMYDYETNK 221 (517)
Q Consensus 208 Gg~~~~~ydp~t~~ 221 (517)
.+..+.+||+....
T Consensus 235 ~~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 235 AGDGVHVLTPDGDE 248 (296)
T ss_dssp ETTEEEEECTTSCE
T ss_pred cCCeEEEECCCCCE
Confidence 87789999998544
No 173
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.26 E-value=1.1 Score=48.77 Aligned_cols=115 Identities=13% Similarity=0.124 Sum_probs=66.7
Q ss_pred ceeecCCCcEEEecCCCCC---CCeEEEecCCCCCCCCceEeccCccccC----------------cC-------cccee
Q 044265 94 SGQILADGTVLQTGGDLDG---YKKIRKFSPCEANGLCDWVELDDVELVN----------------GR-------WYGTD 147 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g---~~~v~~ydp~~~~~t~~W~~~~~~~m~~----------------~R-------~~~s~ 147 (517)
..+..+||+.+++++..++ ...++++|.. +.+...+ ..... .| ...+.
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~----~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIG----SGQTRLL--VDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETT----TCCEEEE--ECGGGTC--------------------CCEESCCC
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECC----CCceeEc--cchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 3456789998888776322 3479999987 5555443 11110 01 13456
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCC---CceeccchhhccccccCCCCceEEEccCCcEEEEE-CCceEEEeCCCCeE
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRN---GAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA-NDKAVMYDYETNKI 222 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~---~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G-g~~~~~ydp~t~~w 222 (517)
+.-+||+.++++.. ..+.+| ..+. ....+.. . ...-......|||+.++++ ...+.+||..+++.
T Consensus 115 ~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~--~------~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTH--G------EGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQ 184 (741)
T ss_dssp EECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCC--S------SSCEEEEEECTTSSEEEEEETTEEEEEETTTTEE
T ss_pred EECCCCCEEEEEeC--CcEEEEECCCCCcceEEEccc--C------CcccccccCCCCCCEEEEEeCCcEEEEecCCCCE
Confidence 77789998777764 456666 3333 2211110 0 0011135567899865554 46789999998877
Q ss_pred EE
Q 044265 223 AR 224 (517)
Q Consensus 223 ~~ 224 (517)
.+
T Consensus 185 ~~ 186 (741)
T 2ecf_A 185 MQ 186 (741)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.23 E-value=2.1 Score=40.49 Aligned_cols=132 Identities=14% Similarity=0.173 Sum_probs=72.0
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cC--cCccce
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VN--GRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~--~R~~~s 146 (517)
.+..||+.++ .+.+.. +.....+.++.++|++|+.... ...+.+||+. +.+.... ... .. ...-..
T Consensus 51 ~i~~~~~~~~-~~~~~~-~~~~~~~l~~~~dg~l~v~~~~---~~~i~~~d~~----~g~~~~~--~~~~~~~~~~~~~~ 119 (296)
T 3e5z_A 51 RTWAWSDDGQ-LSPEMH-PSHHQNGHCLNKQGHLIACSHG---LRRLERQREP----GGEWESI--ADSFEGKKLNSPND 119 (296)
T ss_dssp EEEEEETTSC-EEEEES-SCSSEEEEEECTTCCEEEEETT---TTEEEEECST----TCCEEEE--ECEETTEECCCCCC
T ss_pred EEEEEECCCC-eEEEEC-CCCCcceeeECCCCcEEEEecC---CCeEEEEcCC----CCcEEEE--eeccCCCCCCCCCC
Confidence 3678999887 655443 2222334456689999887542 2579999997 4555543 111 11 112235
Q ss_pred eEEcCCCcEEEE----cCCC------------CCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCcEEEEE
Q 044265 147 DQILPDGSVIIL----GGKG------------ANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFA 208 (517)
Q Consensus 147 ~~~L~dG~v~vv----GG~~------------~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~G 208 (517)
+++-++|++|+. |... ...+..| +. .+..... . ....| ...+.+||++++..
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~---~------~~~~~~gi~~s~dg~~lv~~ 189 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI---R------DRVKPNGLAFLPSGNLLVSD 189 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE---C------CCSSEEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee---c------CCCCCccEEECCCCCEEEEe
Confidence 677789999997 4311 1123333 33 2222110 0 00122 24556799988444
Q ss_pred C--CceEEEeCC-CCeE
Q 044265 209 N--DKAVMYDYE-TNKI 222 (517)
Q Consensus 209 g--~~~~~ydp~-t~~w 222 (517)
. ..+.+||.. +++.
T Consensus 190 ~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 190 TGDNATHRYCLNARGET 206 (296)
T ss_dssp TTTTEEEEEEECSSSCE
T ss_pred CCCCeEEEEEECCCCcC
Confidence 3 468889986 4554
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.95 E-value=1.9 Score=46.85 Aligned_cols=164 Identities=9% Similarity=-0.004 Sum_probs=89.0
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQ 105 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 105 (517)
....|||+.+++.....| . -...+.++|..+++...............+..+||+.++
T Consensus 126 ~~~SPDG~~la~~~~~~G---------~-------------~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNA---------A-------------DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFY 183 (695)
T ss_dssp EEECTTSSEEEEEEEETT---------C-------------SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEE
T ss_pred EEECCCCCEEEEEECCCC---------C-------------ceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEE
Confidence 455689998887654322 1 013688999999987511112222124567789999888
Q ss_pred ecCCCCC----------CCeEEEecCCCCCCCCce--EeccCcccc-CcCccceeEEcCCCcEEEEcCCCC-CceEEe--
Q 044265 106 TGGDLDG----------YKKIRKFSPCEANGLCDW--VELDDVELV-NGRWYGTDQILPDGSVIILGGKGA-NTVEYY-- 169 (517)
Q Consensus 106 ~GG~~~g----------~~~v~~ydp~~~~~t~~W--~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~-~~~E~y-- 169 (517)
....... ...+++++.. +..- ..+ .... ...+..+...-+||+.+++..... .+.++|
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~----t~~~~~~lv--~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLG----TEPSKDTVV--HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETT----SCGGGCEEE--ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEE
T ss_pred EEEecCCCCCccccCCCCCEEEEEECC----CCchhceEE--EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEE
Confidence 7765321 2458888876 3221 111 1111 224566777888998777766544 455666
Q ss_pred CC-CCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-----CceEEEeCCCCe---EEEec
Q 044265 170 PP-RNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-----DKAVMYDYETNK---IAREY 226 (517)
Q Consensus 170 P~-~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-----~~~~~ydp~t~~---w~~~~ 226 (517)
.. ...+..+.. .. ....++ +.++|++|+..+ ..+.++|..+.. |...+
T Consensus 258 ~~~~~~~~~l~~---~~---~~~~~~---~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 258 RPGEKDFRLLVK---GV---GAKYEV---HAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp CTTCSSCEEEEE---CS---SCCEEE---EEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred cCCCCceEEeec---CC---CceEEE---EecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 22 233443211 00 011122 226777666654 346778876654 66433
No 176
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.84 E-value=0.85 Score=44.53 Aligned_cols=132 Identities=12% Similarity=0.120 Sum_probs=73.0
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~~ 148 (517)
.+.+||..+++....-..+.....+.++.++|+.+++||.+ ..+++||.. ...-... ... ....+-.+++
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~----~~~~~~~--~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL----GECKFSS--AEKENHSDWVSCVR 169 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS----SCEEEEC--CTTTSCSSCEEEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc----CCceeee--ecccCCCceeeeee
Confidence 58899999887654333444444456677899999999874 679999976 2221111 111 1222233334
Q ss_pred EcCCC----------cEEEEcCCCCCceEEeCCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEe
Q 044265 149 ILPDG----------SVIILGGKGANTVEYYPPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYD 216 (517)
Q Consensus 149 ~L~dG----------~v~vvGG~~~~~~E~yP~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~yd 216 (517)
.-+++ ..++.|+.+ ..+.+|..... .... +.. +.. .-..+...++|+.++.|+. .+.+||
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~-~~~~-~~~----h~~-~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWD-GRLKVWNTNFQ-IRYT-FKA----HES-NVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETT-SEEEEEETTTE-EEEE-EEC----CSS-CEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred eccccccccccCCCCCEEEEEcCC-CEEEEEcCCCc-eeEE-EcC----ccc-cceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 44443 577777765 45666621111 0000 100 000 1113455689999998874 578888
Q ss_pred CC
Q 044265 217 YE 218 (517)
Q Consensus 217 p~ 218 (517)
..
T Consensus 242 ~~ 243 (343)
T 2xzm_R 242 IL 243 (343)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 177
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.79 E-value=2.8 Score=39.62 Aligned_cols=82 Identities=10% Similarity=-0.042 Sum_probs=46.3
Q ss_pred eEEEEECCCCCeEEcccc----CCCcccceeecCC-CcEEEecCCCCCCCeEEEecCCCCCCCCceEec-cCccccC-cC
Q 044265 70 HSAILDLQTNQIRPLMIL----TDTWCSSGQILAD-GTVLQTGGDLDGYKKIRKFSPCEANGLCDWVEL-DDVELVN-GR 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~d-G~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~-~~~~m~~-~R 142 (517)
.+..||+.+++++.+... ......+.++..+ |++|+.... ..+.+||+. + +.... ....... ..
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----~~l~~~d~~-g----~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR----LGLLVVQTD-G----TFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----TEEEEEETT-S----CEEECCSBCTTSCBCB
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----CCEEEEeCC-C----CEEEEEeccCCCcccc
Confidence 467899989988765431 1112233445678 899887642 368889986 2 22221 0000011 11
Q ss_pred ccceeEEcCCCcEEEEcC
Q 044265 143 WYGTDQILPDGSVIILGG 160 (517)
Q Consensus 143 ~~~s~~~L~dG~v~vvGG 160 (517)
.-...+.-++|++|+...
T Consensus 118 ~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp CCCEEEECTTSCEEEEEC
T ss_pred CCcCEEECCCCCEEEEec
Confidence 234566677999998764
No 178
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.73 E-value=1.6 Score=41.62 Aligned_cols=61 Identities=15% Similarity=0.062 Sum_probs=35.2
Q ss_pred CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEE
Q 044265 89 DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIIL 158 (517)
Q Consensus 89 ~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vv 158 (517)
..|..+-.+. |++||+..|.. +..+++++|++ +.+-... .++...-...+.+.. +++||++
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~-g~S~v~~vD~~----Tgkv~~~--~~l~~~~FgeGit~~-g~~ly~l 102 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLN-GRSSIRKVDIE----SGKTLQQ--IELGKRYFGEGISDW-KDKIVGL 102 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEET-TEEEEEEECTT----TCCEEEE--EECCTTCCEEEEEEE-TTEEEEE
T ss_pred CcccceEEEE-CCEEEEECCCC-CCceEEEEECC----CCcEEEE--EecCCccceeEEEEe-CCEEEEE
Confidence 3444554444 89999999863 44689999998 5554432 233221112234444 5677665
No 179
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=94.62 E-value=4.3 Score=41.02 Aligned_cols=72 Identities=15% Similarity=0.169 Sum_probs=37.3
Q ss_pred eeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEe-CCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCC
Q 044265 303 MGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYR-PTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNP 381 (517)
Q Consensus 303 ~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~Yd-P~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~ 381 (517)
.|.+++.-||+||..|-...|.-|.+...+ ...+..-. |... +...++ .-.+|+ .+|..||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~~-~~~p~~v~~~~~~---~v~~va----~G~~hs-~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNLD-QCSPVQVRFPDDQ---KVVQVS----CGWRHT-LAVTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSSC-EEEEEEECCGGGC---CEEEEE----ECSSEE-EEEETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCCC-CccCEEEeccCCC---cEEEEE----eCCCeE-EEEeCCCCEEEecCCC
Confidence 455567789999999854434322211111 11111111 1111 222221 234676 4557899999999876
Q ss_pred cc
Q 044265 382 HY 383 (517)
Q Consensus 382 ~~ 383 (517)
++
T Consensus 358 ~G 359 (406)
T 4d9s_A 358 NG 359 (406)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 180
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.59 E-value=0.87 Score=42.23 Aligned_cols=137 Identities=13% Similarity=0.061 Sum_probs=70.1
Q ss_pred ceEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 69 AHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 69 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.....+|..+++.+.+..... .......+||+.+++.+..++...+..+|.. +.....+ . .........+
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~----~~~~~~~--~--~~~~~~~~~~ 179 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNLP--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDID----SGVETRL--T--HGEGRNDGPD 179 (297)
T ss_dssp CEEEEEETTCCCCEECCSSSS--EEEEEECTTSSEEEEEEEETTEEEEEEEETT----TCCEEEC--C--CSSSCEEEEE
T ss_pred ceEEEEECCCCceEEeecCCC--ccceEECCCCCEEEEEECCCCceEEEEEECC----CCcceEc--c--cCCCccccce
Confidence 355666777777666544332 3334567899866643322322234444454 4444443 1 1122234456
Q ss_pred EcCCCcEEEEcCCCCCceEEe--C-CCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC-------------ce
Q 044265 149 ILPDGSVIILGGKGANTVEYY--P-PRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND-------------KA 212 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y--P-~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~-------------~~ 212 (517)
..+||+.+++++.......+| . ............ .........+||+.+++++. .+
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA--------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS--------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred ECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC--------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 678998777665433455666 2 222222211100 00112445679987666542 37
Q ss_pred EEEeCCCCeEE
Q 044265 213 VMYDYETNKIA 223 (517)
Q Consensus 213 ~~ydp~t~~w~ 223 (517)
.+||..+++..
T Consensus 252 ~~~d~~~~~~~ 262 (297)
T 2ojh_A 252 QLMDMDGGNVE 262 (297)
T ss_dssp EEEETTSCSCE
T ss_pred EEEecCCCCce
Confidence 78898887654
No 181
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.48 E-value=4.7 Score=40.78 Aligned_cols=113 Identities=15% Similarity=0.070 Sum_probs=59.8
Q ss_pred ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCC-ceEEe-CC
Q 044265 94 SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGAN-TVEYY-PP 171 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~-~~E~y-P~ 171 (517)
+.++..+|+||++... ...+++||+. +..-... ... ... -+ .++.++|+.+++...... .+..+ +.
T Consensus 135 ~la~d~~g~lyv~d~~---~~~I~~id~~----~g~~~~~--~~~-~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD---DPRVRLISVD----DNKVTTV--HPG-FKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp EEEECSTTEEEEEETT---TTEEEEEETT----TTEEEEE--EET-CCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred EEEEeCCCCEEEEecC---CCcEEEEECC----CCEEEEe--ecc-CCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 3445678999998753 3689999997 4444333 111 111 22 566677765444443322 45455 43
Q ss_pred CCCce--eccchhhccccccCCCCceEEEcc-CCcEEEEEC-CceEEEeCCCCeEE
Q 044265 172 RNGAV--SFPFLADVEDKQMDNLYPYVHLLP-NGHLFIFAN-DKAVMYDYETNKIA 223 (517)
Q Consensus 172 ~~~w~--~~~~l~~t~~~~~~~~yp~~~~~~-~G~iyv~Gg-~~~~~ydp~t~~w~ 223 (517)
. .+. ....+... ....-..+++.+ +|+||+.-. ..+.+||+.+....
T Consensus 203 ~-~~~~~~~g~~~~~----~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 203 S-GWAPTRIGQLGST----FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp G-TTCEEEEEECCTT----SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred C-CceeEEeeeccch----hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 2 222 11000000 001112345567 799999543 35889999887654
No 182
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.33 E-value=3.4 Score=38.93 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=36.7
Q ss_pred CcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEE
Q 044265 90 TWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIIL 158 (517)
Q Consensus 90 ~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vv 158 (517)
.|..+- ...++++|+..|.. +..+++.+|+. +.+-... .+++..-...+.+.. ++++|++
T Consensus 21 ~ftqGL-~~~~~~LyestG~~-g~S~v~~vD~~----tgkv~~~--~~l~~~~fgeGi~~~-~~~ly~l 80 (243)
T 3mbr_X 21 AFTEGL-FYLRGHLYESTGET-GRSSVRKVDLE----TGRILQR--AEVPPPYFGAGIVAW-RDRLIQL 80 (243)
T ss_dssp CCEEEE-EEETTEEEEEECCT-TSCEEEEEETT----TCCEEEE--EECCTTCCEEEEEEE-TTEEEEE
T ss_pred cccccE-EEECCEEEEECCCC-CCceEEEEECC----CCCEEEE--EeCCCCcceeEEEEe-CCEEEEE
Confidence 444443 34568999999864 45789999998 5554433 234333233444554 6777775
No 183
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=94.19 E-value=1 Score=47.68 Aligned_cols=153 Identities=10% Similarity=-0.040 Sum_probs=75.0
Q ss_pred EEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEE
Q 044265 25 HTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVL 104 (517)
Q Consensus 25 h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~ 104 (517)
+.+.-+|||.+++.+... | ...+|+..+++-+.+...+.......+..+| +++
T Consensus 26 ~~~~~~DG~~la~~s~~~---------g-----------------~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l 78 (582)
T 3o4h_A 26 SLQGVVDGDKLLVVGFSE---------G-----------------SVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVI 78 (582)
T ss_dssp EEEEEETTTEEEEEEEET---------T-----------------EEEEEEEETTEEEECCSSCCSEECEECTTCS-EEE
T ss_pred eeecCCCCCeEEEEEccC---------C-----------------ceeEEEEcCCCcEeeecccccccccccCCCC-eEE
Confidence 345568998887765321 2 3567887777777665443222223344567 777
Q ss_pred EecCCCCCCC--eEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCc-EEEEcCCCCCceEEe-CCCCCceeccc
Q 044265 105 QTGGDLDGYK--KIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGS-VIILGGKGANTVEYY-PPRNGAVSFPF 180 (517)
Q Consensus 105 v~GG~~~g~~--~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~-v~vvGG~~~~~~E~y-P~~~~w~~~~~ 180 (517)
.+.....+.. .++..+.... ... ..+ ......+ ..+..+||+ ++++.+.... ..+| ..+.....+
T Consensus 79 ~~~~~~~g~~~~~l~~~~~~~~--g~~-~~l--~~~~~~~---~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l-- 147 (582)
T 3o4h_A 79 LVRDVSKGAEQHALFKVNTSRP--GEE-QRL--EAVKPMR---ILSGVDTGEAVVFTGATEDR-VALYALDGGGLREL-- 147 (582)
T ss_dssp EEEECSTTSCCEEEEEEETTST--TCC-EEC--TTSCSBE---EEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEE--
T ss_pred EEeccCCCCcceEEEEEeccCC--Ccc-ccc--cCCCCce---eeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEe--
Confidence 6554322223 3444444101 111 122 1122222 224445663 4444443333 3377 333322211
Q ss_pred hhhccccccCCCCceEEEccCCcEEEEEC------CceEEEeCCCCeEE
Q 044265 181 LADVEDKQMDNLYPYVHLLPNGHLFIFAN------DKAVMYDYETNKIA 223 (517)
Q Consensus 181 l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg------~~~~~ydp~t~~w~ 223 (517)
. . .+. ......|||+..+++. ..+.++|..++++.
T Consensus 148 ~-~----~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 148 A-R----LPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp E-E----ESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred e-c----CCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 0 0 011 2345668999887654 24778898888776
No 184
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.06 E-value=4 Score=38.35 Aligned_cols=88 Identities=15% Similarity=0.148 Sum_probs=51.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
.+.+||..+++.......+...+. ....++.+++.|+.. ..+..++.. ....... ..............
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~~---~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~ 158 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRS---GHIHHHDVR----VAEHHVA--TLSGHSQEVCGLRW 158 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEETT---SEEEEEETT----SSSCEEE--EEECCSSCEEEEEE
T ss_pred cEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEecC---CceEeeecC----CCceeEE--EEcCccCceEEEEE
Confidence 588999988876544444444332 344578888888764 456666655 2222111 11112233445556
Q ss_pred cCCCcEEEEcCCCCCceEEe
Q 044265 150 LPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 150 L~dG~v~vvGG~~~~~~E~y 169 (517)
.++|+.++.|+.+ .++.+|
T Consensus 159 ~~~~~~l~s~~~d-~~i~iw 177 (318)
T 4ggc_A 159 APDGRHLASGGND-NLVNVW 177 (318)
T ss_dssp CTTSSEEEEEETT-SCEEEE
T ss_pred cCCCCEEEEEecC-cceeEE
Confidence 6788988887765 456777
No 185
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.06 E-value=4.8 Score=39.30 Aligned_cols=50 Identities=18% Similarity=0.102 Sum_probs=36.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCC
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPC 122 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 122 (517)
...++|+.+++.+.+...+..........+||+.+++.... ..++++|..
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~ 110 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA 110 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC
Confidence 57789999999888876544333234678899877776643 578889987
No 186
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.99 E-value=4.4 Score=38.65 Aligned_cols=159 Identities=8% Similarity=-0.067 Sum_probs=87.7
Q ss_pred eEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEcc-ccCCCcccceeecCCCc
Q 044265 24 MHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLM-ILTDTWCSSGQILADGT 102 (517)
Q Consensus 24 ~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~-~~~~~~c~~~~~l~dG~ 102 (517)
...++-++|++|+-.|.. | ...+..+|+.|++....- .....|..+ ..+.+++
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----------~---------------~s~v~~iD~~tg~v~~~i~l~~~~fgeG-i~~~g~~ 77 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----------G---------------RSSVRQVALQTGKVENIHKMDDSYFGEG-LTLLNEK 77 (266)
T ss_dssp EEEEECSTTEEEEEECST----------T---------------TCEEEEEETTTCCEEEEEECCTTCCEEE-EEEETTE
T ss_pred ccEEEeCCCeEEEECCCC----------C---------------CCEEEEEECCCCCEEEEEecCCCcceEE-EEEeCCE
Confidence 345555678988876532 1 125789999999976533 333344443 4445678
Q ss_pred EEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-CccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCce-ecc
Q 044265 103 VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG-RWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAV-SFP 179 (517)
Q Consensus 103 l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~-R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~ 179 (517)
||++.-. .+.+.+||+. +.+=.. .++.+ -...+.+. -++++|+.-| ...+.++ |.+.+-. ..+
T Consensus 78 lyv~t~~---~~~v~viD~~----t~~v~~----~i~~g~~~g~glt~-Dg~~l~vs~g--s~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 78 LYQVVWL---KNIGFIYDRR----TLSNIK----NFTHQMKDGWGLAT-DGKILYGSDG--TSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEEEETT---CSEEEEEETT----TTEEEE----EEECCSSSCCEEEE-CSSSEEEECS--SSEEEEECTTTCCEEEEEE
T ss_pred EEEEEec---CCEEEEEECC----CCcEEE----EEECCCCCeEEEEE-CCCEEEEECC--CCeEEEEECCCCcEEEEEE
Confidence 9998643 3689999997 433221 12211 11112232 2456777765 3455666 7664432 111
Q ss_pred chhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCCCeEEEec
Q 044265 180 FLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYETNKIAREY 226 (517)
Q Consensus 180 ~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t~~w~~~~ 226 (517)
. ..+ ..+. .++......+|+||+.- .+.+.+.|+++++....+
T Consensus 144 V--g~~-~~p~-~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 144 V--KYN-GHRV-IRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp C--EET-TEEC-CCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred E--CCC-Cccc-ccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEE
Confidence 1 000 0000 01222223389999775 357889999999876555
No 187
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.98 E-value=2.5 Score=45.54 Aligned_cols=83 Identities=8% Similarity=-0.022 Sum_probs=41.5
Q ss_pred EEEEECCCCCe--EEccccCC----------------CcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEe
Q 044265 71 SAILDLQTNQI--RPLMILTD----------------TWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVE 132 (517)
Q Consensus 71 ~~~yDp~t~~w--~~l~~~~~----------------~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~ 132 (517)
+ +||+.|++. +.+..... .-....++.+|+++++... ..+++||.. +.+-..
T Consensus 46 i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~~-----~~i~~~d~~----~~~~~~ 115 (706)
T 2z3z_A 46 L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFTQ-----GGLVGFDML----ARKVTY 115 (706)
T ss_dssp E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEET-----TEEEEEETT----TTEEEE
T ss_pred E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEEC-----CEEEEEECC----CCceEE
Confidence 6 899999887 55432110 1123345667865555532 689999987 444443
Q ss_pred ccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe
Q 044265 133 LDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 133 ~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y 169 (517)
+ .. ........+.-+||+.++.. . ..++.++
T Consensus 116 l--~~--~~~~~~~~~~SpdG~~la~~-~-~~~i~v~ 146 (706)
T 2z3z_A 116 L--FD--TNEETASLDFSPVGDRVAYV-R-NHNLYIA 146 (706)
T ss_dssp E--EC--CTTCCTTCEECTTSSEEEEE-E-TTEEEEE
T ss_pred c--cC--CcccccCCcCCCCCCEEEEE-E-CCeEEEE
Confidence 3 11 11223345666788776664 2 2345555
No 188
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.96 E-value=2 Score=41.17 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=48.1
Q ss_pred ceeEEcCCCcEEEEcCC-CCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCC
Q 044265 145 GTDQILPDGSVIILGGK-GANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYET 219 (517)
Q Consensus 145 ~s~~~L~dG~v~vvGG~-~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t 219 (517)
++.+.-+||++|+..|. ...++.++ +.+.+-. ..+ +. ...++....+.+++||+.. .+.+.+||+++
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~-------~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MD-------DSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CC-------TTCCEEEEEEETTEEEEEETTCSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cC-------CCcceEEEEEeCCEEEEEEecCCEEEEEECCC
Confidence 56777777999998774 34567777 7665543 211 11 1223333344467899987 45789999999
Q ss_pred CeEEEecC
Q 044265 220 NKIAREYP 227 (517)
Q Consensus 220 ~~w~~~~p 227 (517)
.+....+|
T Consensus 96 ~~v~~~i~ 103 (266)
T 2iwa_A 96 LSNIKNFT 103 (266)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEE
Confidence 87765553
No 189
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.82 E-value=2.9 Score=42.34 Aligned_cols=92 Identities=11% Similarity=-0.085 Sum_probs=56.8
Q ss_pred eEEEEECCCCCeEEc-cccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEec-cCcc----c-----
Q 044265 70 HSAILDLQTNQIRPL-MILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVEL-DDVE----L----- 138 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l-~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~-~~~~----m----- 138 (517)
.+.+||..+++.... ...+.....+.++. ||+++++|+.+ ..+++||.. +.+.... .... +
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~----~~~~~~~~~~~~~~~~~~~~~~ 292 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWK----TGKNLSTFDYNSLIKPYLNDQH 292 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETT----TCCEEEEEECHHHHGGGCCTTS
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECC----CCcEeeeecchhhhhhhhhhcc
Confidence 477899887765433 33344444455566 99999999864 689999987 3332221 0000 0
Q ss_pred ------------cCcCccceeEEcCCCcEEEEcCCCCCceEEe
Q 044265 139 ------------VNGRWYGTDQILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 139 ------------~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y 169 (517)
.....-..++..++|+.+++++.....+.+|
T Consensus 293 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 293 LAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp BC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred cccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 1122334566778899888887555677888
No 190
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.78 E-value=4.8 Score=38.33 Aligned_cols=138 Identities=12% Similarity=-0.025 Sum_probs=75.0
Q ss_pred eEEEEECCCCCeEEccc-cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMI-LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+..+|++|++...-.. ....|.. +..+.+++||++-... +.+.+||+. +.+-.. ..+.+-...+.+
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~Fge-Git~~g~~ly~ltw~~---~~v~v~D~~----t~~~~~----ti~~~~eG~glt 133 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFGE-GISDWKDKIVGLTWKN---GLGFVWNIR----NLRQVR----SFNYDGEGWGLT 133 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCEE-EEEEETTEEEEEESSS---SEEEEEETT----TCCEEE----EEECSSCCCCEE
T ss_pred eEEEEECCCCcEEEEEecCCcccee-EEEEeCCEEEEEEeeC---CEEEEEECc----cCcEEE----EEECCCCceEEe
Confidence 57899999999765433 3344443 3445578999986543 689999998 444332 222222222333
Q ss_pred EcCCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCCCeEEE
Q 044265 149 ILPDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYETNKIAR 224 (517)
Q Consensus 149 ~L~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t~~w~~ 224 (517)
.- ++++|+.-| ...+.++ |.+.+-. ..+.-... .+. .+.--....+|+||+-- .+.+.+.||++++...
T Consensus 134 ~d-g~~L~~SdG--s~~i~~iDp~T~~v~~~I~V~~~g---~~~-~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 134 HN-DQYLIMSDG--TPVLRFLDPESLTPVRTITVTAHG---EEL-PELNELEWVDGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp EC-SSCEEECCS--SSEEEEECTTTCSEEEEEECEETT---EEC-CCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred cC-CCEEEEECC--CCeEEEEcCCCCeEEEEEEeccCC---ccc-cccceeEEECCEEEEEEccCCeEEEEECCCCcEEE
Confidence 22 345555544 2345566 7764432 11110000 000 00001122499999764 3568889999998775
Q ss_pred ec
Q 044265 225 EY 226 (517)
Q Consensus 225 ~~ 226 (517)
.+
T Consensus 207 ~I 208 (262)
T 3nol_A 207 II 208 (262)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 191
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.45 E-value=3.9 Score=39.07 Aligned_cols=137 Identities=12% Similarity=-0.012 Sum_probs=73.8
Q ss_pred EEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEc
Q 044265 71 SAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQIL 150 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L 150 (517)
+..+|++|++...-......|.. +..+.+++||++-..+ +.+.+||+. +.+-.. ..+.+-...+.+.-
T Consensus 77 v~~iD~~Tgkv~~~~l~~~~Fge-Git~~g~~Ly~ltw~~---~~v~V~D~~----Tl~~~~----ti~~~~eGwGLt~D 144 (268)
T 3nok_A 77 LRQLSLESAQPVWMERLGNIFAE-GLASDGERLYQLTWTE---GLLFTWSGM----PPQRER----TTRYSGEGWGLCYW 144 (268)
T ss_dssp EEECCSSCSSCSEEEECTTCCEE-EEEECSSCEEEEESSS---CEEEEEETT----TTEEEE----EEECSSCCCCEEEE
T ss_pred EEEEECCCCcEEeEECCCCccee-EEEEeCCEEEEEEccC---CEEEEEECC----cCcEEE----EEeCCCceeEEecC
Confidence 77899999886543333334443 3455678999986543 689999998 444322 22222212233432
Q ss_pred CCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCCCeEEEec
Q 044265 151 PDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYETNKIAREY 226 (517)
Q Consensus 151 ~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t~~w~~~~ 226 (517)
++++|+.-| ...+.++ |.+.+-. ..+. .....+.. +.--....+|+||+-- .+.+.+.||++++....+
T Consensus 145 -g~~L~vSdG--s~~l~~iDp~T~~v~~~I~V---~~~g~~v~-~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 145 -NGKLVRSDG--GTMLTFHEPDGFALVGAVQV---KLRGQPVE-LINELECANGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp -TTEEEEECS--SSEEEEECTTTCCEEEEEEC---EETTEECC-CEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred -CCEEEEECC--CCEEEEEcCCCCeEEEEEEe---CCCCcccc-cccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 445666554 3345566 7764432 1111 00000000 1001112399999754 356788999998876544
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.45 E-value=5.1 Score=42.65 Aligned_cols=142 Identities=14% Similarity=0.018 Sum_probs=71.5
Q ss_pred eEEEEECCCCCeEE-ccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRP-LMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~-l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.++|+.|++... +..... -++.++.+||+.+.+++.+ ..+.+||.. ..+-... ..+.....-..++
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~--p~~v~~SpDGr~lyv~~~d---g~V~viD~~----~~t~~~v--~~i~~G~~P~~ia 246 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYA--VHISRLSASGRYLFVIGRD---GKVNMIDLW----MKEPTTV--AEIKIGSEARSIE 246 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSC--EEEEEECTTSCEEEEEETT---SEEEEEETT----SSSCCEE--EEEECCSEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCC--ccceEECCCCCEEEEEcCC---CeEEEEECC----CCCCcEe--EEEecCCCCceeE
Confidence 58899999987653 333222 2245677899865555532 479999984 1111222 2333332222344
Q ss_pred Ec----CCCcEEEEcCCCCCceEEe-CCCCCce-eccchhhcccc---ccCCCCceEEEccCCcEEEEEC---CceEEEe
Q 044265 149 IL----PDGSVIILGGKGANTVEYY-PPRNGAV-SFPFLADVEDK---QMDNLYPYVHLLPNGHLFIFAN---DKAVMYD 216 (517)
Q Consensus 149 ~L----~dG~v~vvGG~~~~~~E~y-P~~~~w~-~~~~l~~t~~~---~~~~~yp~~~~~~~G~iyv~Gg---~~~~~yd 216 (517)
+- +||+.++++.....++.++ ..+.+-. ..+....+.+. .+..........+++..|++.- ..+.+.|
T Consensus 247 ~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd 326 (567)
T 1qks_A 247 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 326 (567)
T ss_dssp ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred EccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 44 4898777776665667777 4433221 11110000000 0000111233445666666642 4567788
Q ss_pred CCCCeE
Q 044265 217 YETNKI 222 (517)
Q Consensus 217 p~t~~w 222 (517)
..+.+.
T Consensus 327 ~~~~~~ 332 (567)
T 1qks_A 327 YTDLNN 332 (567)
T ss_dssp TTCSSE
T ss_pred cCCCcc
Confidence 776543
No 193
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.44 E-value=2.3 Score=40.39 Aligned_cols=111 Identities=11% Similarity=0.124 Sum_probs=58.1
Q ss_pred cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcC-ccceeEEcCCCc-EEEEcCCCCCceEEe-CCCCCce-e
Q 044265 102 TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGR-WYGTDQILPDGS-VIILGGKGANTVEYY-PPRNGAV-S 177 (517)
Q Consensus 102 ~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R-~~~s~~~L~dG~-v~vvGG~~~~~~E~y-P~~~~w~-~ 177 (517)
.++++++.. ..+.+||+. +.+.... -.+.... .-..++.-+||+ +|+.+. ....+.+| ..+.+.. .
T Consensus 2 ~~~v~~~~~---~~v~~~d~~----~~~~~~~--~~~~~~~~~~~~~~~s~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 2 DYILAPARP---DKLVVIDTE----KMAVDKV--ITIADAGPTPMVPMVAPGGRIAYATVN-KSESLVKIDLVTGETLGR 71 (337)
T ss_dssp EEEEEEETT---TEEEEEETT----TTEEEEE--EECTTCTTCCCCEEECTTSSEEEEEET-TTTEEEEEETTTCCEEEE
T ss_pred cEEEEcCCC---CeEEEEECC----CCcEEEE--EEcCCCCCCccceEEcCCCCEEEEEeC-CCCeEEEEECCCCCeEee
Confidence 456666543 689999987 4443322 1222211 134567778886 555543 34567777 5544332 1
Q ss_pred ccchh-hccccccCCCCceEEEccCCc-EEEEE-------------CCceEEEeCCCCeEEEec
Q 044265 178 FPFLA-DVEDKQMDNLYPYVHLLPNGH-LFIFA-------------NDKAVMYDYETNKIAREY 226 (517)
Q Consensus 178 ~~~l~-~t~~~~~~~~yp~~~~~~~G~-iyv~G-------------g~~~~~ydp~t~~w~~~~ 226 (517)
.+.-. .... .. -..+.+.+||+ ||+.. ...+.+||..+.+....+
T Consensus 72 ~~~~~~~~~~---~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 72 IDLSTPEERV---KS-LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp EECCBTTEEE---EC-TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred EEcCCccccc---cc-ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 11100 0000 00 11356678885 55542 267889999988766444
No 194
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.05 E-value=6.2 Score=37.44 Aligned_cols=75 Identities=20% Similarity=0.139 Sum_probs=46.8
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc----CcCccc
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV----NGRWYG 145 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~----~~R~~~ 145 (517)
.+..||+.+++.+..... ....+.+...||++++... ..+.+||+. +.+++.+ .... ..| -.
T Consensus 36 ~i~~~d~~~~~~~~~~~~--~~~~~i~~~~dG~l~v~~~-----~~l~~~d~~----~g~~~~~--~~~~~~~~~~~-~~ 101 (297)
T 3g4e_A 36 KVCRWDSFTKQVQRVTMD--APVSSVALRQSGGYVATIG-----TKFCALNWK----EQSAVVL--ATVDNDKKNNR-FN 101 (297)
T ss_dssp EEEEEETTTCCEEEEECS--SCEEEEEEBTTSSEEEEET-----TEEEEEETT----TTEEEEE--EECCTTCSSEE-EE
T ss_pred EEEEEECCCCcEEEEeCC--CceEEEEECCCCCEEEEEC-----CeEEEEECC----CCcEEEE--EecCCCCCCCC-CC
Confidence 467899998877554332 2233455678999777642 578899998 5666554 2221 122 23
Q ss_pred eeEEcCCCcEEEE
Q 044265 146 TDQILPDGSVIIL 158 (517)
Q Consensus 146 s~~~L~dG~v~vv 158 (517)
..++-++|++|+.
T Consensus 102 di~~d~dG~l~~~ 114 (297)
T 3g4e_A 102 DGKVDPAGRYFAG 114 (297)
T ss_dssp EEEECTTSCEEEE
T ss_pred CEEECCCCCEEEe
Confidence 4566779998874
No 195
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.76 E-value=3.6 Score=46.46 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=22.5
Q ss_pred cCCcEEEEECCceEEEeCCCCeEEEec
Q 044265 200 PNGHLFIFANDKAVMYDYETNKIAREY 226 (517)
Q Consensus 200 ~~G~iyv~Gg~~~~~ydp~t~~w~~~~ 226 (517)
++|.+.+.+...+.+|++.+++..+..
T Consensus 713 ~~~~~l~~~~~~ir~~~~~~~k~~~k~ 739 (902)
T 2oaj_A 713 IPGIVLITGFDDIRLITLGKSKSTHKG 739 (902)
T ss_dssp CCEEEEEECSSEEEEECTTCCCEEEEE
T ss_pred CCeEEEEEeccceEEEeCccccceeeE
Confidence 588899999889999999998876543
No 196
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.58 E-value=9.6 Score=41.83 Aligned_cols=137 Identities=9% Similarity=0.042 Sum_probs=80.0
Q ss_pred EEEEECCCCCeEEccccC-----CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccC-ccccCcCcc
Q 044265 71 SAILDLQTNQIRPLMILT-----DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDD-VELVNGRWY 144 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~-----~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~-~~m~~~R~~ 144 (517)
..+||+.+++|+...... ..+..+.....+|+|++..- . ..+.+||+. +.++..... ..++... .
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~---~Gl~~~~~~----~~~~~~~~~~~~l~~~~-i 541 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G---GGVGIYTPD----MQLVRKFNQYEGFCSNT-I 541 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S---SCEEEECTT----CCEEEEECTTTTCSCSC-E
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C---CCEEEEeCC----CCeEEEccCCCCCCCCe-e
Confidence 567899998887654322 22333344556888887542 1 237779988 667766511 1232222 2
Q ss_pred ceeEEcCCCcEEEEcCCCCCce-EEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECCceEEEeCCCCeE
Q 044265 145 GTDQILPDGSVIILGGKGANTV-EYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFANDKAVMYDYETNKI 222 (517)
Q Consensus 145 ~s~~~L~dG~v~vvGG~~~~~~-E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~~~~~ydp~t~~w 222 (517)
.+.+.-.+|+|++... ... -+| |.++++..... .+..+.+.......-.+|+||+.+.+...+|||++.++
T Consensus 542 ~~i~~d~~g~lWi~T~---~Glv~~~d~~~~~~~~~~~----~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~ 614 (781)
T 3v9f_A 542 NQIYRSSKGQMWLATG---EGLVCFPSARNFDYQVFQR----KEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCF 614 (781)
T ss_dssp EEEEECTTSCEEEEET---TEEEEESCTTTCCCEEECG----GGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEC---CCceEEECCCCCcEEEccc----cCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCce
Confidence 3444556789887532 234 566 66665543211 11111222223344458999999888899999999887
Q ss_pred E
Q 044265 223 A 223 (517)
Q Consensus 223 ~ 223 (517)
.
T Consensus 615 ~ 615 (781)
T 3v9f_A 615 Y 615 (781)
T ss_dssp E
T ss_pred E
Confidence 6
No 197
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.47 E-value=7.7 Score=37.01 Aligned_cols=72 Identities=8% Similarity=0.015 Sum_probs=45.3
Q ss_pred eeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCCCeE
Q 044265 146 TDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYETNKI 222 (517)
Q Consensus 146 s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t~~w 222 (517)
+...- ++++|+..|..+. +..+ +++.+-...- +.. ..+.......+++||+.. .+.+.+||+++.+.
T Consensus 59 GL~~~-~~~Ly~stG~~g~-v~~iD~~Tgkv~~~~-l~~-------~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 59 GLVFH-QGHFFESTGHQGT-LRQLSLESAQPVWME-RLG-------NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEE-TTEEEEEETTTTE-EEECCSSCSSCSEEE-ECT-------TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE
T ss_pred eEEEE-CCEEEEEcCCCCE-EEEEECCCCcEEeEE-CCC-------CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE
Confidence 33433 7899999887654 6677 6665443111 211 123222344578999987 46789999999887
Q ss_pred EEecC
Q 044265 223 AREYP 227 (517)
Q Consensus 223 ~~~~p 227 (517)
...++
T Consensus 129 ~~ti~ 133 (268)
T 3nok_A 129 ERTTR 133 (268)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76664
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.31 E-value=2.7 Score=40.09 Aligned_cols=144 Identities=9% Similarity=0.060 Sum_probs=76.8
Q ss_pred eEEEEECCCCCeEEcccc----CCCcccceeecCCCcEEEec-CCC-------CCCCeEEEecCCCCCCCCceEeccCcc
Q 044265 70 HSAILDLQTNQIRPLMIL----TDTWCSSGQILADGTVLQTG-GDL-------DGYKKIRKFSPCEANGLCDWVELDDVE 137 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~l~v~G-G~~-------~g~~~v~~ydp~~~~~t~~W~~~~~~~ 137 (517)
.+..||+++++++.+... ...+....++.++|++|+.- +.. .....+..+|+. .+.... ...
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-----g~~~~~-~~~ 147 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-----HHVKKY-FDQ 147 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-----SCEEEE-EEE
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-----CCEEEE-eec
Confidence 467899999988876532 22334556678899988853 111 112467778775 222222 012
Q ss_pred ccCcCccceeEEcCCCc-EEEEcCCCCCceEEe-C--CCCCceeccchhhccccccCCCCce-EEEccCCcEEEEE--CC
Q 044265 138 LVNGRWYGTDQILPDGS-VIILGGKGANTVEYY-P--PRNGAVSFPFLADVEDKQMDNLYPY-VHLLPNGHLFIFA--ND 210 (517)
Q Consensus 138 m~~~R~~~s~~~L~dG~-v~vvGG~~~~~~E~y-P--~~~~w~~~~~l~~t~~~~~~~~yp~-~~~~~~G~iyv~G--g~ 210 (517)
+.. -.+.+..+||+ +|++.. ....+..| . .+........+... .....+|. +.+-.+|+||+.. +.
T Consensus 148 ~~~---pngi~~spdg~~lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~---~~~~~~p~g~~~d~~G~lwva~~~~~ 220 (297)
T 3g4e_A 148 VDI---SNGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKL---EKEEQIPDGMCIDAEGKLWVACYNGG 220 (297)
T ss_dssp ESB---EEEEEECTTSCEEEEEEG-GGTEEEEEEECTTTCCEEEEEEEEEC---CGGGCEEEEEEEBTTSCEEEEEETTT
T ss_pred ccc---ccceEEcCCCCEEEEecC-CCCcEEEEeccCCCCcccCcEEEEEC---CCCCCCCCeeEECCCCCEEEEEcCCC
Confidence 222 23567777887 555543 23445555 2 33222110000000 00011333 3444789999885 45
Q ss_pred ceEEEeCCCCeEEEec
Q 044265 211 KAVMYDYETNKIAREY 226 (517)
Q Consensus 211 ~~~~ydp~t~~w~~~~ 226 (517)
.+.+||+++++....+
T Consensus 221 ~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 221 RVIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred EEEEEcCCCceEEEEE
Confidence 6899999988765444
No 199
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.16 E-value=14 Score=39.48 Aligned_cols=80 Identities=9% Similarity=-0.061 Sum_probs=49.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCC-----CceEeccCccccCcC--
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGL-----CDWVELDDVELVNGR-- 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t-----~~W~~~~~~~m~~~R-- 142 (517)
.+.+||..+++.+.+..... ........+||+.+++... ..++++|.. + .+...+ .......
T Consensus 102 ~i~~~d~~~~~~~~l~~~~~-~~~~~~~SpdG~~la~~~~----~~i~v~~~~----~~~~~~g~~~~~--~~~~~~~~~ 170 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFDTNE-ETASLDFSPVGDRVAYVRN----HNLYIARGG----KLGEGMSRAIAV--TIDGTETLV 170 (706)
T ss_dssp EEEEEETTTTEEEEEECCTT-CCTTCEECTTSSEEEEEET----TEEEEEECB----CTTSCCCCCEES--CSCCBTTEE
T ss_pred EEEEEECCCCceEEccCCcc-cccCCcCCCCCCEEEEEEC----CeEEEEecC----cccccCCCcEEe--ccCCCCCeE
Confidence 57789998887776654322 2334567889988777522 679999987 4 444433 1111110
Q ss_pred -----------ccceeEEcCCCcEEEEcC
Q 044265 143 -----------WYGTDQILPDGSVIILGG 160 (517)
Q Consensus 143 -----------~~~s~~~L~dG~v~vvGG 160 (517)
...+.+.-+||+.++++.
T Consensus 171 ~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred cccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 124566778999888876
No 200
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=91.98 E-value=3.5 Score=41.16 Aligned_cols=145 Identities=9% Similarity=0.062 Sum_probs=78.3
Q ss_pred eEEEEECCC-CC-eEEc------cccCCCcccceeecCCC-cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC
Q 044265 70 HSAILDLQT-NQ-IRPL------MILTDTWCSSGQILADG-TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN 140 (517)
Q Consensus 70 ~~~~yDp~t-~~-w~~l------~~~~~~~c~~~~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~ 140 (517)
.+.+||..+ ++ +..+ ...+........+.++| +++++|+.+ ..+++||... .+........+..
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~----~~~~~~~~~~~~~ 271 (447)
T 3dw8_B 199 RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK---GTIRLCDMRA----SALCDRHSKLFEE 271 (447)
T ss_dssp EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT---SCEEEEETTT----CSSSCTTCEEECC
T ss_pred eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC---CeEEEEECcC----CccccceeeEecc
Confidence 477888873 22 2211 11233334455667888 899999874 5799999873 2210000001111
Q ss_pred cC-------------ccceeEEcCCCcEEEEcCCCCCceEEe-CCC-CCce-eccchhhcccc-----ccCCCC--ceEE
Q 044265 141 GR-------------WYGTDQILPDGSVIILGGKGANTVEYY-PPR-NGAV-SFPFLADVEDK-----QMDNLY--PYVH 197 (517)
Q Consensus 141 ~R-------------~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~-~~w~-~~~~l~~t~~~-----~~~~~y--p~~~ 197 (517)
.. .-.+++..++|+.++.|+. ..+.+| ... .... ....-...... .....+ ..+.
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 349 (447)
T 3dw8_B 272 PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECC 349 (447)
T ss_dssp C-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEE
T ss_pred CCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccccccccccccccccccccceEEE
Confidence 11 3456677789999888876 678888 433 2211 11000000000 000000 0156
Q ss_pred EccCCcEEEEECC--ceEEEeCCCCeEE
Q 044265 198 LLPNGHLFIFAND--KAVMYDYETNKIA 223 (517)
Q Consensus 198 ~~~~G~iyv~Gg~--~~~~ydp~t~~w~ 223 (517)
..++|+.++.|+. .+.+||..+++..
T Consensus 350 ~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 350 WNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp ECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 6789998888874 5889999988765
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.86 E-value=12 Score=37.78 Aligned_cols=52 Identities=12% Similarity=-0.060 Sum_probs=32.8
Q ss_pred eEEEEECCCCCeEE-ccccC------CCcccceeecCCCcEEEecCCCCCCCeEEEecCC
Q 044265 70 HSAILDLQTNQIRP-LMILT------DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPC 122 (517)
Q Consensus 70 ~~~~yDp~t~~w~~-l~~~~------~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 122 (517)
.+.+||+.|++... +.... .......++.+||+.+.+.-.. ..+++.++|..
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-~~~~VsVID~~ 168 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLE 168 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETT
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-CCCeEEEEECC
Confidence 58899999988653 33221 1234556778899754443221 13688899988
No 202
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=91.63 E-value=4.1 Score=40.91 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=36.9
Q ss_pred eeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 303 MGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 303 ~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
.|.+++.-||+||..|-...|.-|.+.. .....+..-..-.+ .+...+ ..-.+|+ ++|..||+||.-|-+..
T Consensus 275 ~hs~alt~~G~v~~wG~n~~GqLG~g~~-~~~~~P~~v~~l~~--~~v~~i----a~G~~h~-~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 275 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQG--KKVIAI----ATGSLHC-VCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTCSSSC-CCEEEEEECGGGTT--CCEEEE----EECSSEE-EEEETTCCEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCCCC-ccccCCeEeccCCC--CCEEEE----EeccCeE-EEECCCCCEEEeeCCCC
Confidence 4555667799999998644343222111 11111111110000 022221 1235675 45678999999998765
Q ss_pred c
Q 044265 383 Y 383 (517)
Q Consensus 383 ~ 383 (517)
+
T Consensus 347 G 347 (389)
T 3kci_A 347 G 347 (389)
T ss_dssp S
T ss_pred C
Confidence 3
No 203
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.63 E-value=2.1 Score=42.94 Aligned_cols=90 Identities=12% Similarity=0.045 Sum_probs=51.9
Q ss_pred eEEEEECCCCCeEEcccc--CCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMIL--TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||..+++-...-.. +.....+.++.++++++++|+.+ ..+++||.. +.+.... -.+.....-.++
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~----~~~~~~~--~~~~~~~~v~~~ 263 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIR----FNVLIRS--WSFGDHAPITHV 263 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETT----TTEEEEE--EBCTTCEEEEEE
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcC----CccEEEE--EecCCCCceEEE
Confidence 478999988775433322 33444455667899999999875 579999987 4333221 011111111122
Q ss_pred EEc----CCCcEEEEcCCCCCceEEe
Q 044265 148 QIL----PDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 148 ~~L----~dG~v~vvGG~~~~~~E~y 169 (517)
+.. +|++.++.|+.+. .+.+|
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg-~i~iw 288 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKT-FLTIW 288 (437)
T ss_dssp EECTTTCTTEEEEEEESTTE-EEEEE
T ss_pred EeccccCCCccEEEEEcCCC-cEEEE
Confidence 111 4677877777653 45555
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.35 E-value=7.3 Score=37.06 Aligned_cols=138 Identities=12% Similarity=0.054 Sum_probs=75.3
Q ss_pred eEEEEECCCCCeEEccccC----CCcccceeecCCCcEEEe----cCCC----------CCCCeEEEecCCCCCCCCceE
Q 044265 70 HSAILDLQTNQIRPLMILT----DTWCSSGQILADGTVLQT----GGDL----------DGYKKIRKFSPCEANGLCDWV 131 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~l~v~----GG~~----------~g~~~v~~ydp~~~~~t~~W~ 131 (517)
.+..||+. ++.+.+.... .......++.++|++|++ |-.. .+...+.+||+. +.++.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~----~g~~~ 182 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD----GSPLQ 182 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS----SCCCE
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC----CCcEE
Confidence 46678876 6666554211 122345667789999996 4321 013578899997 56666
Q ss_pred eccCccccCcCccceeEEcCCCc-EEEEcCCC----CCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCcE
Q 044265 132 ELDDVELVNGRWYGTDQILPDGS-VIILGGKG----ANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHL 204 (517)
Q Consensus 132 ~~~~~~m~~~R~~~s~~~L~dG~-v~vvGG~~----~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~i 204 (517)
.. ..+. .-.+.+.-+||+ +|+..-.. ...+.+| ...+........... ....| ...+-.+|+|
T Consensus 183 ~~--~~~~---~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-----~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 183 RM--ADLD---HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-----PDGLPDGFCVDRGGWL 252 (305)
T ss_dssp EE--EEES---SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-----SSSCCCSEEECTTSCE
T ss_pred EE--ecCC---CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-----CCCCCCeEEECCCCCE
Confidence 55 2222 223567778998 56553321 1345556 332221100000000 00112 2455679999
Q ss_pred EEEECCceEEEeCCCCeE
Q 044265 205 FIFANDKAVMYDYETNKI 222 (517)
Q Consensus 205 yv~Gg~~~~~ydp~t~~w 222 (517)
|+..+..+.+||+.....
T Consensus 253 wv~~~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 253 WSSSGTGVCVFDSDGQLL 270 (305)
T ss_dssp EECCSSEEEEECTTSCEE
T ss_pred EEecCCcEEEECCCCCEE
Confidence 988877799999965543
No 205
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.10 E-value=18 Score=38.41 Aligned_cols=144 Identities=13% Similarity=0.078 Sum_probs=77.7
Q ss_pred eEEEEECC--C-CCeEEcccc----CCCcccceeecCCCcEEEecCCC-------CCCCeEEEecCCCCCCC------Cc
Q 044265 70 HSAILDLQ--T-NQIRPLMIL----TDTWCSSGQILADGTVLQTGGDL-------DGYKKIRKFSPCEANGL------CD 129 (517)
Q Consensus 70 ~~~~yDp~--t-~~w~~l~~~----~~~~c~~~~~l~dG~l~v~GG~~-------~g~~~v~~ydp~~~~~t------~~ 129 (517)
....+|.. + ++.+.+... +.......+..+||+.+++.... .+...+.++|.. + .+
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~ 178 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLD----GSAAADRSA 178 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETT----STTTTCGGG
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECC----CCccccCCc
Confidence 35566766 3 666666542 22233455677899988776543 223578889987 4 44
Q ss_pred eEeccCccccCcCccceeEEcCCCcEEEEcCCCC-----CceEEe--CCC-CC-ceeccchhhccccccCCCCceEEEcc
Q 044265 130 WVELDDVELVNGRWYGTDQILPDGSVIILGGKGA-----NTVEYY--PPR-NG-AVSFPFLADVEDKQMDNLYPYVHLLP 200 (517)
Q Consensus 130 W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~-----~~~E~y--P~~-~~-w~~~~~l~~t~~~~~~~~yp~~~~~~ 200 (517)
...+ .. ....+....+.-+||+.+++...+. ...++| +.. ++ +.....+... ...........+
T Consensus 179 ~~~l--~~-~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~----~~~~~~~~~~sp 251 (662)
T 3azo_A 179 VREL--SD-DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG----PEEAIAQAEWAP 251 (662)
T ss_dssp SEES--SC-SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE----TTBCEEEEEECT
T ss_pred eeEE--Ee-cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC----CCceEcceEECC
Confidence 4443 10 1234455667778999777665432 123444 332 22 1111001000 001111244568
Q ss_pred CCcEEEEECC----ceEEEeCCCCeEEE
Q 044265 201 NGHLFIFAND----KAVMYDYETNKIAR 224 (517)
Q Consensus 201 ~G~iyv~Gg~----~~~~ydp~t~~w~~ 224 (517)
||++|+.+.. .++++|..++++..
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQ 279 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceee
Confidence 9998877753 56778887888864
No 206
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=90.93 E-value=12 Score=42.18 Aligned_cols=108 Identities=7% Similarity=0.064 Sum_probs=64.2
Q ss_pred ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCC
Q 044265 94 SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPR 172 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~ 172 (517)
+.++.+||+++++|+.+ ..+++||.. +..-.. .+.....-.+++..+ |+.++.|+. ..++.+| ..+
T Consensus 22 ~lafspdg~~lAsgs~D---g~I~lw~~~----~~~~~~----~~~~~~~V~~l~fsp-g~~L~S~s~-D~~v~lWd~~~ 88 (902)
T 2oaj_A 22 AAAFDFTQNLLAIATVT---GEVHIYGQQ----QVEVVI----KLEDRSAIKEMRFVK-GIYLVVINA-KDTVYVLSLYS 88 (902)
T ss_dssp EEEEETTTTEEEEEETT---SEEEEECST----TCEEEE----ECSSCCCEEEEEEET-TTEEEEEET-TCEEEEEETTT
T ss_pred EEEECCCCCEEEEEeCC---CEEEEEeCC----CcEEEE----EcCCCCCEEEEEEcC-CCEEEEEEC-cCeEEEEECCC
Confidence 35567899999999875 689999976 332221 122233344556666 786566654 4678888 544
Q ss_pred CCceeccchhhccccccCCCCceEEEccCCcEEEEEC--CceEEEeCCCCeE
Q 044265 173 NGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN--DKAVMYDYETNKI 222 (517)
Q Consensus 173 ~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w 222 (517)
.+... . +.. . ..--.+...++|+.+++|. ..+.+||..+++-
T Consensus 89 ~~~~~-~-~~~-----~-~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 89 QKVLT-T-VFV-----P-GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CSEEE-E-EEC-----S-SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred CcEEE-E-EcC-----C-CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 33211 0 100 0 0011234457899888886 4688999988764
No 207
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=90.91 E-value=13 Score=36.86 Aligned_cols=167 Identities=8% Similarity=-0.012 Sum_probs=82.8
Q ss_pred ceEEEEECCC-CCeEE-ccc--cCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccC----
Q 044265 69 AHSAILDLQT-NQIRP-LMI--LTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVN---- 140 (517)
Q Consensus 69 ~~~~~yDp~t-~~w~~-l~~--~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~---- 140 (517)
..+.+|+... ++-.. +.. .....+...-+-.|+.+++.|+.+ +.+++||.. +.+-... |..
T Consensus 157 ~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D---~TIkIWDl~----TGk~l~t----L~g~~~~ 225 (356)
T 2w18_A 157 QQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIM---NNIVIWNLK----TGQLLKK----MHIDDSY 225 (356)
T ss_dssp CEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETT---SEEEEEETT----TCCEEEE----EECCC--
T ss_pred CcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCC---CcEEEEECC----CCcEEEE----EcCCCcc
Confidence 3577888744 44322 111 111112222223478999999875 799999998 5543321 221
Q ss_pred cCccceeEEcCCCcEEEEcC-----------CCCCceEEe-CCCCCcee-ccc-hhhccccccCCCCceEEEccCCcEEE
Q 044265 141 GRWYGTDQILPDGSVIILGG-----------KGANTVEYY-PPRNGAVS-FPF-LADVEDKQMDNLYPYVHLLPNGHLFI 206 (517)
Q Consensus 141 ~R~~~s~~~L~dG~v~vvGG-----------~~~~~~E~y-P~~~~w~~-~~~-l~~t~~~~~~~~yp~~~~~~~G~iyv 206 (517)
.+.-.+.+.-+||++++++. ....++.+| +.+..-.. ... ++.. +. .. +...-.+|.+.+
T Consensus 226 v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~G---h~-~~--~lsg~~sg~~lA 299 (356)
T 2w18_A 226 QASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPG---QA-GR--FLEGDVKDHCAA 299 (356)
T ss_dssp -CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTT---CC-CC--EEEEEEETTEEE
T ss_pred eeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCC---Cc-ce--eEccccCCCEEE
Confidence 12222345677998876543 233456666 55432211 000 0000 00 00 111112244556
Q ss_pred EEC--CceEEEeCCCCeEEEecCCCCCCCCCCCCCCceeeeecccCccccEEEEEcCCc
Q 044265 207 FAN--DKAVMYDYETNKIAREYPPLDGGPRNYPSAGSSAMLALEGDFATAVIVVCGGAQ 263 (517)
Q Consensus 207 ~Gg--~~~~~ydp~t~~w~~~~p~~p~~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~ 263 (517)
.|. ..+.+||..+++-...+ .+.. ... -+.+.+.. +++.++.|+.+
T Consensus 300 SgS~DgTIkIWDl~tGk~l~tL---~gH~-~~v--vs~vafSP-----DG~~LaSGS~D 347 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTALL---PPVS-DQH--WSFVKWSG-----TDSHLLAGQKD 347 (356)
T ss_dssp EEETTSCEEEEETTTCSEEEEE---CCC---CC--CCEEEECS-----SSSEEEEECTT
T ss_pred EEcCCCcEEEEECCCCcEEEEe---cCCC-CCe--EEEEEECC-----CCCEEEEEECC
Confidence 653 46889999999877654 2211 111 12222322 78999999876
No 208
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=89.85 E-value=3.2 Score=40.73 Aligned_cols=49 Identities=10% Similarity=0.005 Sum_probs=35.8
Q ss_pred EEEEECCCCCeEEccc-c-CCCcccceeecCCCcEEEecCCCCCCCeEEEecCC
Q 044265 71 SAILDLQTNQIRPLMI-L-TDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPC 122 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~-~-~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 122 (517)
+.+||..+++-...-. . +.......++.+||+++++|+.+ ..+++||..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~ 270 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK---WTLHVFEIF 270 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT---CEEEEEESS
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC---CEEEEEEcc
Confidence 7899998877543222 2 44455566778899999999875 689999976
No 209
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=88.68 E-value=21 Score=38.16 Aligned_cols=86 Identities=12% Similarity=-0.099 Sum_probs=50.1
Q ss_pred eEEEEECCCCCeEEccccCCC---cccceeecCCCcEEEecCCCCC------CCeEEEecCCCCCCCCceEeccCccccC
Q 044265 70 HSAILDLQTNQIRPLMILTDT---WCSSGQILADGTVLQTGGDLDG------YKKIRKFSPCEANGLCDWVELDDVELVN 140 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~---~c~~~~~l~dG~l~v~GG~~~g------~~~v~~ydp~~~~~t~~W~~~~~~~m~~ 140 (517)
.+.+||+.+++-..+...+.. .....++.+||+.++++..... ...+++||.. +.+-..+ .....
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~----~~~~~~l--~~~~~ 111 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP----HGDPQSL--DPPEV 111 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS----SCCCEEC--CCTTC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC----CCceEec--cCCcc
Confidence 467888888876655443332 2345667899998888764321 2578899987 4443444 21111
Q ss_pred c-CccceeEEcCCCcEEEEcCC
Q 044265 141 G-RWYGTDQILPDGSVIILGGK 161 (517)
Q Consensus 141 ~-R~~~s~~~L~dG~v~vvGG~ 161 (517)
. .+....+.-|||+.++.+..
T Consensus 112 ~~~~~~~~~~SPdG~~la~~~~ 133 (723)
T 1xfd_A 112 SNAKLQYAGWGPKGQQLIFIFE 133 (723)
T ss_dssp CSCCCSBCCBCSSTTCEEEEET
T ss_pred ccccccccEECCCCCEEEEEEC
Confidence 1 11223455678877666553
No 210
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.61 E-value=30 Score=37.32 Aligned_cols=108 Identities=11% Similarity=0.038 Sum_probs=62.8
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQ 105 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 105 (517)
....+||+.+++..... |. ......++|..+++.......... ..+.+..+||+.++
T Consensus 130 ~~~SPDg~~la~~~~~~---------G~-------------~~~~i~v~d~~tg~~~~~~~~~~~-~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSAS---------GS-------------DWVTIKFMKVDGAKELPDVLERVK-FSCMAWTHDGKGMF 186 (710)
T ss_dssp EEECTTSSEEEEEEEET---------TC-------------SCEEEEEEETTTTEEEEEEEEEEC-SCCEEECTTSSEEE
T ss_pred EEECCCCCEEEEEEcCC---------CC-------------ceEEEEEEECCCCCCCcccccCcc-cceEEEEeCCCEEE
Confidence 45568999888765432 21 112578999999998775332211 23456778998777
Q ss_pred ecCCCCC-------------CCeEEEecCCCCCCCCceE--eccCccccCcCccceeEEcCCCcEEEEcCC
Q 044265 106 TGGDLDG-------------YKKIRKFSPCEANGLCDWV--ELDDVELVNGRWYGTDQILPDGSVIILGGK 161 (517)
Q Consensus 106 ~GG~~~g-------------~~~v~~ydp~~~~~t~~W~--~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~ 161 (517)
++..... ...+++++.. +.... .+ -..-..+.+..+....+||+.+++...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~----t~~~~~~~v-~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLG----TDQSEDILC-AEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETT----SCGGGCEEE-ECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEEECCccccccccccccCCCCEEEEEECC----CCcccceEE-eccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 7654322 2357888876 33311 11 001112445566778889997777653
No 211
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=88.29 E-value=16 Score=36.03 Aligned_cols=89 Identities=11% Similarity=0.044 Sum_probs=50.2
Q ss_pred eEEEEECCCCCeEE---cc--ccCCCcccceeec--------CCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCc
Q 044265 70 HSAILDLQTNQIRP---LM--ILTDTWCSSGQIL--------ADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDV 136 (517)
Q Consensus 70 ~~~~yDp~t~~w~~---l~--~~~~~~c~~~~~l--------~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~ 136 (517)
.+.+||..+++-.. +. ..|..+-....+. .||++++.||.+ +++++||.. +..=.. .
T Consensus 112 ~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D---~tv~~Wd~~----~~~~~~---~ 181 (393)
T 4gq1_A 112 TVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD---CTLIIWRLT----DEGPIL---A 181 (393)
T ss_dssp CEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT---SEEEEEEEE----TTEEEE---E
T ss_pred cEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC---CeEEEEECC----CCceee---e
Confidence 47788887765433 22 1233332233333 289999999975 789999986 222111 1
Q ss_pred cccCcCccceeEEcCCCc-EEEEcCCCCCceEEe
Q 044265 137 ELVNGRWYGTDQILPDGS-VIILGGKGANTVEYY 169 (517)
Q Consensus 137 ~m~~~R~~~s~~~L~dG~-v~vvGG~~~~~~E~y 169 (517)
.......-.+++..|++. +++.|+.+ .++.+|
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d-~~v~~w 214 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGERN-GNIRIF 214 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEETT-SEEEEE
T ss_pred ecCCCCCcEEEEECCCCCceEEecCCC-CEEEEE
Confidence 122222334566677775 56666554 456666
No 212
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.25 E-value=22 Score=37.60 Aligned_cols=108 Identities=13% Similarity=0.009 Sum_probs=62.2
Q ss_pred CCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CC--CCCc
Q 044265 99 ADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PP--RNGA 175 (517)
Q Consensus 99 ~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~--~~~w 175 (517)
+++.+||+... ..++.++|+. +.+-.. .+.....-+.++.-+||+.+.+++.+ ..+.+| .. +.+-
T Consensus 165 ~~~~~~V~~~~---~~~V~viD~~----t~~v~~----~i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t~~~ 232 (567)
T 1qks_A 165 LENLFSVTLRD---AGQIALIDGS----TYEIKT----VLDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKEPTT 232 (567)
T ss_dssp GGGEEEEEETT---TTEEEEEETT----TCCEEE----EEECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCCE
T ss_pred CCceEEEEeCC---CCeEEEEECC----CCeEEE----EEeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCCCcE
Confidence 34567777653 3689999998 554332 23444334567788899865555543 356677 53 3222
Q ss_pred eeccchhhccccccCCCCc-eEEEc----cCCcEEEEEC---CceEEEeCCCCeEEEecC
Q 044265 176 VSFPFLADVEDKQMDNLYP-YVHLL----PNGHLFIFAN---DKAVMYDYETNKIAREYP 227 (517)
Q Consensus 176 ~~~~~l~~t~~~~~~~~yp-~~~~~----~~G~iyv~Gg---~~~~~ydp~t~~w~~~~p 227 (517)
. ..+. ....| ++.+. +||+..++++ .++.++|..+.+-.+.++
T Consensus 233 v--~~i~-------~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 233 V--AEIK-------IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp E--EEEE-------CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred e--EEEe-------cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 1 1010 01123 34455 5897555554 578899999887765543
No 213
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.20 E-value=6 Score=42.16 Aligned_cols=130 Identities=8% Similarity=0.022 Sum_probs=72.8
Q ss_pred eEEEEECCCCCeEEccccCCC-----cccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCc-----eEeccCcccc
Q 044265 70 HSAILDLQTNQIRPLMILTDT-----WCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCD-----WVELDDVELV 139 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~-----~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~-----W~~~~~~~m~ 139 (517)
.+.+||-++ .+..+. ++. -..+.++-+||+.+++||.+ ..+++||.. ++. +..+ ..+.
T Consensus 108 ~V~iwd~~~-~l~~l~--~~~~~~~~sv~svafSPDG~~LAsgs~D---GtVkIWd~~----~~~l~~~~~i~l--~ti~ 175 (588)
T 2j04_A 108 NVSVFKDNK-MLTNLD--SKGNLSSRTYHCFEWNPIESSIVVGNED---GELQFFSIR----KNSENTPEFYFE--SSIR 175 (588)
T ss_dssp CEEEEETTE-EEEECC--CSSCSTTTCEEEEEECSSSSCEEEEETT---SEEEEEECC----CCTTTCCCCEEE--EEEE
T ss_pred cEEEEeCCc-eeeecc--CCCccccccEEEEEEcCCCCEEEEEcCC---CEEEEEECC----CCccccccceee--eeee
Confidence 366787443 333333 332 25566778999999999975 689999987 332 1111 1111
Q ss_pred -----CcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCc----eeccchhhccccccCCCCceEEEccCCcEEEEEC
Q 044265 140 -----NGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGA----VSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN 209 (517)
Q Consensus 140 -----~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w----~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg 209 (517)
...|-.+++..+|| +++++.+ +++.+| ...+.- ..+.. ..++ .... +... +..|...+.
T Consensus 176 ~~~~gh~~~V~sVawSPdg--Laass~D-~tVrlWd~~~~~~~~~~~tL~~--~h~~----~V~s-vaFs-g~~LASa~~ 244 (588)
T 2j04_A 176 LSDAGSKDWVTHIVWYEDV--LVAALSN-NSVFSMTVSASSHQPVSRMIQN--ASRR----KITD-LKIV-DYKVVLTCP 244 (588)
T ss_dssp CSCTTCCCCEEEEEEETTE--EEEEETT-CCEEEECCCSSSSCCCEEEEEC--CCSS----CCCC-EEEE-TTEEEEECS
T ss_pred cccccccccEEEEEEcCCc--EEEEeCC-CeEEEEECCCCccccceeeecc--cccC----cEEE-EEEE-CCEEEEEeC
Confidence 23477788888898 5666654 567777 443331 11100 0100 1111 2222 434444445
Q ss_pred CceEEEeCCCCeE
Q 044265 210 DKAVMYDYETNKI 222 (517)
Q Consensus 210 ~~~~~ydp~t~~w 222 (517)
..+.+||..+++-
T Consensus 245 ~tIkLWd~~~~~~ 257 (588)
T 2j04_A 245 GYVHKIDLKNYSI 257 (588)
T ss_dssp SEEEEEETTTTEE
T ss_pred CeEEEEECCCCeE
Confidence 6789999998876
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.94 E-value=24 Score=35.43 Aligned_cols=156 Identities=9% Similarity=0.037 Sum_probs=81.2
Q ss_pred eEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcE
Q 044265 24 MHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTV 103 (517)
Q Consensus 24 ~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l 103 (517)
..+++-++|+||+.+..+ ..+..||+.+++.+.+......-| .++.++|+.
T Consensus 134 ~~la~d~~g~lyv~d~~~---------------------------~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~ 184 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDD---------------------------PRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQR 184 (409)
T ss_dssp EEEEECSTTEEEEEETTT---------------------------TEEEEEETTTTEEEEEEETCCBCB--CEECTTSSE
T ss_pred eEEEEeCCCCEEEEecCC---------------------------CcEEEEECCCCEEEEeeccCCCCc--eeEecCCCc
Confidence 345556788888887421 147789999888776654322223 566778875
Q ss_pred EEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-c-CcCccceeEEcC-CCcEEEEcCCCCCceEEe-CCCCCceecc
Q 044265 104 LQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-V-NGRWYGTDQILP-DGSVIILGGKGANTVEYY-PPRNGAVSFP 179 (517)
Q Consensus 104 ~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~-~~R~~~s~~~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~~~~ 179 (517)
+.+.... +...+.+||+.. ....... ..+ . ...+-+++++-+ +|++|+.-. ...+..| +.........
T Consensus 185 l~~~d~~-~~~~I~~~d~~~---~~~~~~~--g~~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~~~~~~~ 256 (409)
T 3hrp_A 185 VYSIGWE-GTHTVYVYMKAS---GWAPTRI--GQLGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQEVTLIK 256 (409)
T ss_dssp EEEEBSS-TTCEEEEEEGGG---TTCEEEE--EECCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTCCEEEEE
T ss_pred EEEEecC-CCceEEEEEcCC---CceeEEe--eeccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCCCEEEEe
Confidence 5544432 123899999872 1111121 111 1 223345667777 799999543 2345666 5544322110
Q ss_pred chhhccccccCCCC--ceEEEcc-CCcEEEEEC--CceEEEeCCC
Q 044265 180 FLADVEDKQMDNLY--PYVHLLP-NGHLFIFAN--DKAVMYDYET 219 (517)
Q Consensus 180 ~l~~t~~~~~~~~y--p~~~~~~-~G~iyv~Gg--~~~~~ydp~t 219 (517)
..... ...... +..++.+ +|+||+.-. ..+.+||+..
T Consensus 257 ~~~~~---g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 257 QLELS---GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp ECCCC---SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred ccccc---CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 00000 001112 2456666 588887642 3455555443
No 215
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.55 E-value=5.2 Score=42.00 Aligned_cols=139 Identities=12% Similarity=0.084 Sum_probs=77.3
Q ss_pred EEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCC-CCeEEEecCCCCCCCCceEeccCccccCcCccceeEE
Q 044265 71 SAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDG-YKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQI 149 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g-~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~ 149 (517)
..+||..+++.+.+...+. ...++.+||+.+++++...+ ...++++|.. +.++..+ . .........+.
T Consensus 134 ~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~----~g~~~~l--~--~~~~~~~~~~~ 202 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS----SGGLRVF--D--SGEGSFSSASI 202 (582)
T ss_dssp EEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETT----TCCCEEE--C--CSSCEEEEEEE
T ss_pred ceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC----CCCceEe--e--cCCCccccceE
Confidence 3489999988777664433 34556789999997765422 2568999987 5666655 1 11222345677
Q ss_pred cCCCcEEEEcCCCC-CceEEe-CCCCCceeccchhhccccccCCC-CceEEEccCCcEEEEEC--CceEEEeCCCCeEE
Q 044265 150 LPDGSVIILGGKGA-NTVEYY-PPRNGAVSFPFLADVEDKQMDNL-YPYVHLLPNGHLFIFAN--DKAVMYDYETNKIA 223 (517)
Q Consensus 150 L~dG~v~vvGG~~~-~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~-yp~~~~~~~G~iyv~Gg--~~~~~ydp~t~~w~ 223 (517)
.+||+.++.+..+. ..+.+| ..+.+............ ..... .......+||++++.+. ....+|+. ++..
T Consensus 203 SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 203 SPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFS-SYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp CTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHH-HHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE
T ss_pred CCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChh-hhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee
Confidence 88999888544332 134445 44433321110000000 00000 00112568998888764 46788888 5543
No 216
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=87.39 E-value=33 Score=36.56 Aligned_cols=84 Identities=10% Similarity=-0.062 Sum_probs=52.3
Q ss_pred ceEEEEECCCCCeEEccccC--CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc-----
Q 044265 69 AHSAILDLQTNQIRPLMILT--DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG----- 141 (517)
Q Consensus 69 ~~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~----- 141 (517)
....+||..+++.+.+.... .......+..+||+.++++.. ..++++|.. +.+...+ ..-...
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~----~g~~~~~--~~~~~~~~~~~ 160 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE----NNIYYCAHV----GKQAIRV--VSTGKEGVIYN 160 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET----TEEEEESSS----SSCCEEE--ECCCBTTTEEE
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC----CeEEEEECC----CCceEEE--ecCCCCCceEC
Confidence 46789999998877665432 223345567889988888764 578999987 3333332 111000
Q ss_pred ---C---------ccceeEEcCCCcEEEEcCCC
Q 044265 142 ---R---------WYGTDQILPDGSVIILGGKG 162 (517)
Q Consensus 142 ---R---------~~~s~~~L~dG~v~vvGG~~ 162 (517)
. ...+.+..+||+.++.+..+
T Consensus 161 g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 161 GLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp EECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred cccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 0 12456778899988776543
No 217
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=87.14 E-value=8 Score=38.48 Aligned_cols=136 Identities=13% Similarity=0.071 Sum_probs=67.9
Q ss_pred eEEEEECCCCCeEEccccCC---CcccceeecCCCcEEEecCCCC---------CCCeEEEecCCCCCCCCceEeccCcc
Q 044265 70 HSAILDLQTNQIRPLMILTD---TWCSSGQILADGTVLQTGGDLD---------GYKKIRKFSPCEANGLCDWVELDDVE 137 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~---~~c~~~~~l~dG~l~v~GG~~~---------g~~~v~~ydp~~~~~t~~W~~~~~~~ 137 (517)
.+.+||++|++....-..++ ......++.+||++++++.... ....+++||+. +.+-...-.-.
T Consensus 204 TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~----tgk~l~v~~~~ 279 (356)
T 2w18_A 204 NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK----TTLSVGVMLYC 279 (356)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT----TTEEEEEEEEC
T ss_pred cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC----CCEEEEEEEee
Confidence 58899999998644322222 1222335678999887654310 13688899987 44332210000
Q ss_pred ccCcCccce-eEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceE
Q 044265 138 LVNGRWYGT-DQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAV 213 (517)
Q Consensus 138 m~~~R~~~s-~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~ 213 (517)
++..+.... ..-. +|.+++.|+ ...++.+| ..+.+-.. .+... .......+...|||+.++.|+. .+.
T Consensus 280 ~p~Gh~~~~lsg~~-sg~~lASgS-~DgTIkIWDl~tGk~l~--tL~gH----~~~vvs~vafSPDG~~LaSGS~D~TIk 351 (356)
T 2w18_A 280 LPPGQAGRFLEGDV-KDHCAAAIL-TSGTIAIWDLLLGQCTA--LLPPV----SDQHWSFVKWSGTDSHLLAGQKDGNIF 351 (356)
T ss_dssp CCTTCCCCEEEEEE-ETTEEEEEE-TTSCEEEEETTTCSEEE--EECCC------CCCCEEEECSSSSEEEEECTTSCEE
T ss_pred ccCCCcceeEcccc-CCCEEEEEc-CCCcEEEEECCCCcEEE--EecCC----CCCeEEEEEECCCCCEEEEEECCCcEE
Confidence 111111000 0111 244545444 44678888 55443321 11110 0111223556789999988874 577
Q ss_pred EEeC
Q 044265 214 MYDY 217 (517)
Q Consensus 214 ~ydp 217 (517)
+||.
T Consensus 352 lWd~ 355 (356)
T 2w18_A 352 VYHY 355 (356)
T ss_dssp EEEE
T ss_pred EecC
Confidence 7774
No 218
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=87.08 E-value=23 Score=34.28 Aligned_cols=140 Identities=15% Similarity=0.174 Sum_probs=69.7
Q ss_pred eEEEEECCCCCeEEccccCCCcccce--eecCCCcEEEecC----C---------------CCCCCeEEEecCCCCCCCC
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSG--QILADGTVLQTGG----D---------------LDGYKKIRKFSPCEANGLC 128 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~--~~l~dG~l~v~GG----~---------------~~g~~~v~~ydp~~~~~t~ 128 (517)
...++|+.+++-+.+...+..+.... ...+||+.++.-- . ......+.++|.. +.
T Consensus 103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~----~g 178 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK----TG 178 (388)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT----TC
T ss_pred eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC----CC
Confidence 46788999988776655544433222 2357888776210 0 0112578888987 44
Q ss_pred ceEeccCccccCcCccceeEEcC-CCcEEEEcCCCC---CceEEe---CCCCCceeccchhhccccccCCCCceEEEccC
Q 044265 129 DWVELDDVELVNGRWYGTDQILP-DGSVIILGGKGA---NTVEYY---PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPN 201 (517)
Q Consensus 129 ~W~~~~~~~m~~~R~~~s~~~L~-dG~v~vvGG~~~---~~~E~y---P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~ 201 (517)
+-..+ .....+......-+ ||+.++...... ...++| ........+.. .. ...........+|
T Consensus 179 ~~~~l----~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~----~~~~~~~~~~spd 248 (388)
T 3pe7_A 179 ESTVI----LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT--HA----EGESCTHEFWVPD 248 (388)
T ss_dssp CEEEE----EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC--CC----TTEEEEEEEECTT
T ss_pred ceEEe----ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee--CC----CCcccccceECCC
Confidence 43333 12223344556677 887655433221 122333 33222222110 00 0000112345689
Q ss_pred CcEEEE-EC----Cc--eEEEeCCCCeEE
Q 044265 202 GHLFIF-AN----DK--AVMYDYETNKIA 223 (517)
Q Consensus 202 G~iyv~-Gg----~~--~~~ydp~t~~w~ 223 (517)
|+.+++ .. .. +.+||..+++..
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 984433 21 22 889999988754
No 219
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=85.73 E-value=43 Score=36.24 Aligned_cols=163 Identities=8% Similarity=-0.057 Sum_probs=83.4
Q ss_pred EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEE
Q 044265 26 TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQ 105 (517)
Q Consensus 26 ~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 105 (517)
....|||+.+++..... |. -.....++|..+++..+.... .......+..+| +-++
T Consensus 168 ~~~SPDG~~la~~~~~~---------G~-------------e~~~i~v~dl~tg~~~~~~~~-~~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQDG---------GS-------------DWRTVKFVGVADGKPLADELK-WVKFSGLAWLGN-DALL 223 (741)
T ss_dssp EEECTTSSEEEEEEEET---------TC-------------SEEEEEEEETTTCCEEEEEEE-EEESCCCEESTT-SEEE
T ss_pred EEECCCCCEEEEEEcCC---------CC-------------ceEEEEEEECCCCCCCCccCC-CceeccEEEECC-CEEE
Confidence 34568999888765432 21 013578999999998765221 111234556788 6665
Q ss_pred ecCCCCC-----------CCeEEEecCCCCCCCCce--EeccCccccCcCccceeEEcCCCcEEEEcCCCC--CceEEe-
Q 044265 106 TGGDLDG-----------YKKIRKFSPCEANGLCDW--VELDDVELVNGRWYGTDQILPDGSVIILGGKGA--NTVEYY- 169 (517)
Q Consensus 106 ~GG~~~g-----------~~~v~~ydp~~~~~t~~W--~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~--~~~E~y- 169 (517)
++..... ...+++++.. +..- ..+ -..-..+++..+...-+||+.+++..... ...++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~lg----t~~~~~~lv-~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~ 298 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHRLG----TPQSADQPV-FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHV 298 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEETT----SCGGGCEEE-ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEE
T ss_pred EEEecCcccccccccCCCCCEEEEEECC----CCchhCEEE-eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEE
Confidence 5544322 2357777765 2221 111 01111234556677788998666655432 234555
Q ss_pred -CC-CC--C-ceeccchhhccccccCCCCceEEEccCCc-EEEEEC-----CceEEEeCCC--CeEEEec
Q 044265 170 -PP-RN--G-AVSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN-----DKAVMYDYET--NKIAREY 226 (517)
Q Consensus 170 -P~-~~--~-w~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg-----~~~~~ydp~t--~~w~~~~ 226 (517)
+. +. . +..+.. .. ....++ +.++|+ ||+..+ ....++|..+ ..|...+
T Consensus 299 ~d~~~~~~~~~~~l~~---~~---~~~~~~---~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 299 ARVTNGKIGPVTALIP---DL---KAQWDF---VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp EEEETTEECCCEEEEC---SS---SSCEEE---EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE
T ss_pred EECCCCCCcccEEecC---CC---CceEEE---EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe
Confidence 32 22 3 443211 00 011122 236665 555443 2367888877 5787544
No 220
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=84.47 E-value=29 Score=33.06 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=69.2
Q ss_pred EEEEECCCCCeEEcccc----CCCcccceeecC-CCcEEEecCCC--------------CCCCeEEEecCCCCCCCCceE
Q 044265 71 SAILDLQTNQIRPLMIL----TDTWCSSGQILA-DGTVLQTGGDL--------------DGYKKIRKFSPCEANGLCDWV 131 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~-dG~l~v~GG~~--------------~g~~~v~~ydp~~~~~t~~W~ 131 (517)
...||+.+++.+.+... ...+....++.. +|+||+.-... .....+.+||+. +.+..
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~----~~~~~ 178 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS----TKETT 178 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT----TTEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC----CCEEE
Confidence 45677776665544321 112344566778 89999974221 112468889987 44443
Q ss_pred eccCccccCcCccceeEEcCCCc-EEEEcCCCCCceEEe-CCCC---CceeccchhhccccccCCCCce-EEEccCCcEE
Q 044265 132 ELDDVELVNGRWYGTDQILPDGS-VIILGGKGANTVEYY-PPRN---GAVSFPFLADVEDKQMDNLYPY-VHLLPNGHLF 205 (517)
Q Consensus 132 ~~~~~~m~~~R~~~s~~~L~dG~-v~vvGG~~~~~~E~y-P~~~---~w~~~~~l~~t~~~~~~~~yp~-~~~~~~G~iy 205 (517)
.. ...+.. -...+.-+||+ +||.-- ....+.+| .... .......+ + . |. +.+-.+|+||
T Consensus 179 ~~-~~~~~~---p~gia~~~dg~~lyv~d~-~~~~I~~~~~~~~~~~~~~~~~~~-------~--g-P~gi~~d~~G~l~ 243 (322)
T 2fp8_A 179 LL-LKELHV---PGGAEVSADSSFVLVAEF-LSHQIVKYWLEGPKKGTAEVLVKI-------P--N-PGNIKRNADGHFW 243 (322)
T ss_dssp EE-EEEESC---CCEEEECTTSSEEEEEEG-GGTEEEEEESSSTTTTCEEEEEEC-------S--S-EEEEEECTTSCEE
T ss_pred Ee-ccCCcc---CcceEECCCCCEEEEEeC-CCCeEEEEECCCCcCCccceEEeC-------C--C-CCCeEECCCCCEE
Confidence 32 012222 23456667887 666532 22346666 4321 11111000 0 1 22 3445689999
Q ss_pred EEEC------------CceEEEeCCCCe
Q 044265 206 IFAN------------DKAVMYDYETNK 221 (517)
Q Consensus 206 v~Gg------------~~~~~ydp~t~~ 221 (517)
+... ..+.+||+....
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~G~~ 271 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEFGNI 271 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTTSCE
T ss_pred EEecCcccccccCCCccEEEEECCCCCE
Confidence 8753 247789997443
No 221
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=83.82 E-value=30 Score=32.86 Aligned_cols=66 Identities=9% Similarity=-0.049 Sum_probs=30.9
Q ss_pred EEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccc-cccceeeecCCCcEEEecC
Q 044265 307 VMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPR-MYHSTANLLPDGRVLIAGS 379 (517)
Q Consensus 307 v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R-~yhs~a~ll~dG~V~v~GG 379 (517)
++-++|+|||......... . .......+.+|||+.. ....+.. +... ..+.+++...+|++||+..
T Consensus 235 ~~d~~G~l~va~~~~~~~~--~-~~~~~~~v~~~d~~G~---~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 235 KRNADGHFWVSSSEELDGN--M-HGRVDPKGIKFDEFGN---ILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp EECTTSCEEEEEEEETTSS--T-TSCEEEEEEEECTTSC---EEEEEEC-CTTTTTSCCCEEEEETTEEEEECS
T ss_pred EECCCCCEEEEecCccccc--c-cCCCccEEEEECCCCC---EEEEEEC-CCCCccccceEEEEeCCEEEEeec
Confidence 4557899999864310000 0 0000123678998644 3332211 1100 1122233347899998864
No 222
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.93 E-value=25 Score=33.92 Aligned_cols=81 Identities=16% Similarity=0.222 Sum_probs=48.9
Q ss_pred eEEEEECCCCCeEEccccC-CCcccceeecCCCcEEEecCCCCCCC--eEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 70 HSAILDLQTNQIRPLMILT-DTWCSSGQILADGTVLQTGGDLDGYK--KIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~-~~~c~~~~~l~dG~l~v~GG~~~g~~--~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
...++|..+++++.+.... ...+....+.+||+.+++.....+.. .+.+||.. +.+...+ ..+. .+.
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~----~g~~~~l--~~~~--~~~-- 286 (396)
T 3c5m_A 217 RMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE----TLENEEV--MVMP--PCS-- 286 (396)
T ss_dssp CCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT----TCCEEEE--EECC--SEE--
T ss_pred eEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC----CCCeEEe--eeCC--CCC--
Confidence 4678899888888776521 22233446678998666554433333 49999987 5555444 2222 222
Q ss_pred eEEcC-CCcEEEEcC
Q 044265 147 DQILP-DGSVIILGG 160 (517)
Q Consensus 147 ~~~L~-dG~v~vvGG 160 (517)
.+..+ ||++++..+
T Consensus 287 ~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 287 HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EEEECSSSSEEEEEE
T ss_pred CCccCCCCceEEEec
Confidence 45567 999887754
No 223
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=77.64 E-value=86 Score=34.15 Aligned_cols=141 Identities=12% Similarity=0.120 Sum_probs=71.7
Q ss_pred EEEEECCCCCeEEccccC-------CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccC-----ccc
Q 044265 71 SAILDLQTNQIRPLMILT-------DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDD-----VEL 138 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~-------~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~-----~~m 138 (517)
..+||+.+++++...... .....+.....+|.|++.- . ..+.+||+. +.++..... ..+
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~----~Gl~~~~~~----~~~~~~~~~~~~~~~~l 307 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-F----NDLNIYHEG----TDSFASYSSNPVENGSL 307 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-S----SCEEEEETT----TTEEEEECCCTTSTTSC
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-C----ChhheEcCC----CCeEEEEecCCCCCCCC
Confidence 567899888887654321 1222223344578888743 1 247789988 667765410 112
Q ss_pred cCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC-CceEEEe
Q 044265 139 VNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-DKAVMYD 216 (517)
Q Consensus 139 ~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-~~~~~yd 216 (517)
.... -.+...-.+|.++|- - ....+.+| +....+......... .....+.-...+.-.+|+|++-.. ....+||
T Consensus 308 ~~~~-i~~i~~D~~g~lWig-t-~~~Gl~~~~~~~~~~~~~~~~~~~-~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~ 383 (795)
T 4a2l_A 308 SQRS-VRSIFMDSQGGMWLG-T-YFGGLNYYHPIRNRFKNIRNIPYK-NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYN 383 (795)
T ss_dssp SSSC-EEEEEECTTSCEEEE-E-SSSCEEEECGGGGSSEEECCCTTS-SSCSCSSEEEEEECTTSCEEEEESSSCEEEEC
T ss_pred CCCc-EEEEEEeCCcCEEEE-E-CCCCeEEeCCCcccceEEcCCCCC-CCCCCCeeEEEEECCCCCEEEEECCCCeEEEc
Confidence 2222 334555567888873 2 12234555 444333311110000 000011111122234788998653 3688999
Q ss_pred CCCCeEEE
Q 044265 217 YETNKIAR 224 (517)
Q Consensus 217 p~t~~w~~ 224 (517)
+.++++..
T Consensus 384 ~~~~~~~~ 391 (795)
T 4a2l_A 384 PITQRFTS 391 (795)
T ss_dssp TTTCCEEE
T ss_pred CCCCcEEE
Confidence 99988864
No 224
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=77.40 E-value=21 Score=35.57 Aligned_cols=141 Identities=13% Similarity=0.073 Sum_probs=71.5
Q ss_pred eEEEEECCCCC-eEEcc--ccCCCcccceeecCCCc-EEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCcc
Q 044265 70 HSAILDLQTNQ-IRPLM--ILTDTWCSSGQILADGT-VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWY 144 (517)
Q Consensus 70 ~~~~yDp~t~~-w~~l~--~~~~~~c~~~~~l~dG~-l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~ 144 (517)
.+.+||..+.. ...+. ..+.....+..+.+++. ++++|+.+ ..+.+||.... .. .+ ..+. ....-
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~~~---~~--~~--~~~~~h~~~v 324 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWDLRNL---KL--KL--HSFESHKDEI 324 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCT---TS--CS--EEEECCSSCE
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCCCC---CC--Ce--EEeecCCCCE
Confidence 57889988752 11111 12333334455667776 88888864 67999998721 11 11 1122 22334
Q ss_pred ceeEEcCCC-cEEEEcCCCCCceEEe-CCC-CCcee------c-cchhhccccccCCCCceEEEccCCc-EEEEEC--Cc
Q 044265 145 GTDQILPDG-SVIILGGKGANTVEYY-PPR-NGAVS------F-PFLADVEDKQMDNLYPYVHLLPNGH-LFIFAN--DK 211 (517)
Q Consensus 145 ~s~~~L~dG-~v~vvGG~~~~~~E~y-P~~-~~w~~------~-~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~Gg--~~ 211 (517)
.+++..+++ .+|+.|+.+ ..+.+| ... ..... . +.+......+. ..-..+...++++ +++.++ +.
T Consensus 325 ~~i~~sp~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 325 FQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp EEEEECSSCTTEEEEEETT-SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS-SCEEEEEECSSSTTEEEEEETTSE
T ss_pred EEEEECCCCCCEEEEEeCC-CcEEEEeCCCCccccCccccccCCcceEEEcCCCC-CCceEEEECCCCCCEEEEEECCCC
Confidence 456667777 477777765 456666 221 10000 0 00000000000 0011244567888 777776 45
Q ss_pred eEEEeCCCCeE
Q 044265 212 AVMYDYETNKI 222 (517)
Q Consensus 212 ~~~ydp~t~~w 222 (517)
+.+|+...+.+
T Consensus 403 i~iw~~~~~~~ 413 (430)
T 2xyi_A 403 MQVWQMAENVY 413 (430)
T ss_dssp EEEEEECHHHH
T ss_pred EEEeEcccccc
Confidence 78888876544
No 225
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.73 E-value=41 Score=38.18 Aligned_cols=81 Identities=11% Similarity=-0.053 Sum_probs=55.1
Q ss_pred eEE-EEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSA-ILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~-~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
... +||..+++.+.+. .+.......++.+||+.++++... ..+++||.. +.+-... .. .......+.+
T Consensus 359 ~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~----tg~~~~~--~~-~~~~~v~~~~ 427 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLE----TGKPTVI--ER-SREAMITDFT 427 (1045)
T ss_dssp EEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETT----TCCEEEE--EE-CSSSCCCCEE
T ss_pred ceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC---CeEEEEECC----CCceEEe--cc-CCCCCccceE
Confidence 455 7899988888776 444455566778999999888653 589999998 5554443 11 1223335567
Q ss_pred EcCCCcEEEEcCC
Q 044265 149 ILPDGSVIILGGK 161 (517)
Q Consensus 149 ~L~dG~v~vvGG~ 161 (517)
.-+||+.++.++.
T Consensus 428 ~SpDG~~la~~~~ 440 (1045)
T 1k32_A 428 ISDNSRFIAYGFP 440 (1045)
T ss_dssp ECTTSCEEEEEEE
T ss_pred ECCCCCeEEEEec
Confidence 7889998877765
No 226
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=75.69 E-value=16 Score=34.00 Aligned_cols=101 Identities=14% Similarity=0.176 Sum_probs=59.7
Q ss_pred ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc---CccceeEEcCCCcEEEEcCCCCCceEEe-
Q 044265 94 SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG---RWYGTDQILPDGSVIILGGKGANTVEYY- 169 (517)
Q Consensus 94 ~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~---R~~~s~~~L~dG~v~vvGG~~~~~~E~y- 169 (517)
+..+-+||.||++ .+ -.+...+|-++ ....|.-. +..-.. +-++.+..-++|.||.+. +..-+...
T Consensus 92 a~~fD~~G~LYav---~d--G~iyr~~pP~~-~~~~Wl~~--a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~ 161 (236)
T 1tl2_A 92 FLFFDPNGYLYAV---SK--DKLYKASPPQS-DTDNWIAR--ATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALP 161 (236)
T ss_dssp EEEECTTSCEEEE---ET--TEEEEESCCCS-TTCCHHHH--SEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECC
T ss_pred EEEECCCCCEEEe---CC--CEEEEeCCCcC-CCCceecc--ccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCC
Confidence 4556789999999 23 36666776322 25688643 222111 235777888999999998 33323333
Q ss_pred CC--CCCceec-cchhhccccccCCCCceEEEccCCcEEEEE
Q 044265 170 PP--RNGAVSF-PFLADVEDKQMDNLYPYVHLLPNGHLFIFA 208 (517)
Q Consensus 170 P~--~~~w~~~-~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G 208 (517)
|. ...|... ..+- ....+.|++++..++|.||.+-
T Consensus 162 P~~~~~~wl~~~~~~g----~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 162 PVSNQDNWLARATKIG----QGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp CSSTTCCHHHHCEEEE----SSSGGGEEEEEECTTSCEEEEE
T ss_pred CCCCCcccccccceec----cCCcceEEEEEECCCCcEEEEe
Confidence 54 3456421 1111 0224567778888899999764
No 227
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.36 E-value=27 Score=33.62 Aligned_cols=93 Identities=11% Similarity=0.048 Sum_probs=50.7
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCC-------------CCCCeEEEecCCCCCCCCceEeccC
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDL-------------DGYKKIRKFSPCEANGLCDWVELDD 135 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~-------------~g~~~v~~ydp~~~~~t~~W~~~~~ 135 (517)
.+.+||+.+++.+.+...+. +. ....+ ||+++++.+.. .+...+.++|+. +.+...+..
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~----~~~~~~l~~ 337 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK----AKSAQKLCK 337 (396)
T ss_dssp EEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT----TTBCCEEEE
T ss_pred eEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc----cCceEEccC
Confidence 37889999988776654322 22 45667 99988875421 133678999987 444333300
Q ss_pred ccccC-------cCccceeEEcCCCcEEEEcCCCCCceEEe
Q 044265 136 VELVN-------GRWYGTDQILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 136 ~~m~~-------~R~~~s~~~L~dG~v~vvGG~~~~~~E~y 169 (517)
..... .+.....+..+||+.+++........++|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 338 HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence 11100 00122345567887666554433344555
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=73.81 E-value=54 Score=29.97 Aligned_cols=140 Identities=13% Similarity=0.046 Sum_probs=71.5
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.++|+.....+.+.........+.++.+ +|+||++-... ....++++++. ...-..+....+ .+-.+.+
T Consensus 102 ~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~~d----g~~~~~~~~~~~---~~P~gia 173 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-DNPKIETSHMD----GTNRRILAQDNL---GLPNGLT 173 (267)
T ss_dssp EEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS-SSCEEEEEETT----SCCCEEEECTTC---SCEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC-CCcEEEEEecC----CCCcEEEEECCC---CCCcEEE
Confidence 456677764433332211112334445556 68899885321 13578888876 222122100122 2223445
Q ss_pred EcCC-CcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCCCeEEE
Q 044265 149 ILPD-GSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYETNKIAR 224 (517)
Q Consensus 149 ~L~d-G~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t~~w~~ 224 (517)
+-++ +++|+.--. ...+.++ +....-.. .+. ...+|.....-+++||+.- +..+.++|+.+++...
T Consensus 174 ~d~~~~~lyv~d~~-~~~I~~~~~~g~~~~~--~~~-------~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 174 FDAFSSQLCWVDAG-THRAECLNPAQPGRRK--VLE-------GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp EETTTTEEEEEETT-TTEEEEEETTEEEEEE--EEE-------CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EcCCCCEEEEEECC-CCEEEEEecCCCceEE--Eec-------CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceE
Confidence 5454 578876532 2456666 44211111 110 0124544444578899875 3678999999988776
Q ss_pred ecC
Q 044265 225 EYP 227 (517)
Q Consensus 225 ~~p 227 (517)
.++
T Consensus 244 ~i~ 246 (267)
T 1npe_A 244 TFH 246 (267)
T ss_dssp EEC
T ss_pred EEc
Confidence 554
No 229
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=73.61 E-value=26 Score=39.83 Aligned_cols=84 Identities=10% Similarity=-0.019 Sum_probs=54.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCC-------CCCeEEEecCCCCCCCCceEeccCccccCcC
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLD-------GYKKIRKFSPCEANGLCDWVELDDVELVNGR 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~-------g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R 142 (517)
.+.+||..+++...+...+.......++.+||+.+++++... ....+++||.. +.+...+ .. ...
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~----~g~~~~l--~~--~~~ 472 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME----GRKIFAA--TT--ENS 472 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT----TTEEEEC--SC--SSS
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC----CCcEEEe--eC--CCc
Confidence 477999999998877644544445567789999888776421 23589999987 4554443 11 112
Q ss_pred ccceeEEcCCCcEEEEcCC
Q 044265 143 WYGTDQILPDGSVIILGGK 161 (517)
Q Consensus 143 ~~~s~~~L~dG~v~vvGG~ 161 (517)
.....+..+||+.++++..
T Consensus 473 ~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 473 HDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp BEEEEEECTTSCEEEEEES
T ss_pred ccCCceEcCCCCEEEEEec
Confidence 2234567789987666553
No 230
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=72.65 E-value=18 Score=38.56 Aligned_cols=120 Identities=9% Similarity=0.044 Sum_probs=72.2
Q ss_pred CcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcCccceeEEcCCCcEEEEcCCCCCceEE
Q 044265 90 TWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGRWYGTDQILPDGSVIILGGKGANTVEY 168 (517)
Q Consensus 90 ~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R~~~s~~~L~dG~v~vvGG~~~~~~E~ 168 (517)
..-.+.+..+||+.+++++.+ ..+.+||-. + .+.... ..+. ..|.+++++.-+||+.+++||.+ .++.+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~d---g~V~iwd~~----~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-GtVkI 155 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNN---GNVSVFKDN----K-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-GELQF 155 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETT---SCEEEEETT----E-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT-SEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCC---CcEEEEeCC----c-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC-CEEEE
Confidence 333456678899999998875 568999854 2 444431 2232 34568899999999999999976 46888
Q ss_pred e-CCCCCc-----eeccchhhccccccCCCCceEEEccCCcEEEEEC-CceEEEeCCCCe
Q 044265 169 Y-PPRNGA-----VSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN-DKAVMYDYETNK 221 (517)
Q Consensus 169 y-P~~~~w-----~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg-~~~~~ydp~t~~ 221 (517)
| ...+.- .....+......+. .+--.+...+|| +.+.+. +.+.+||..+++
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~-~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSK-DWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCC-CCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred EECCCCccccccceeeeeeeccccccc-ccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 8 554321 01111100000011 122245566899 444443 678999998765
No 231
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=72.37 E-value=62 Score=31.71 Aligned_cols=160 Identities=12% Similarity=0.027 Sum_probs=75.2
Q ss_pred CCcEEEEE--CCceEEEeCCCCeEEEecCCCCC-----CCCCCCCCCceeeeecccCccccEEEEEcCCcCCcccccCCC
Q 044265 201 NGHLFIFA--NDKAVMYDYETNKIAREYPPLDG-----GPRNYPSAGSSAMLALEGDFATAVIVVCGGAQFGAFIQRSTD 273 (517)
Q Consensus 201 ~G~iyv~G--g~~~~~ydp~t~~w~~~~p~~p~-----~~r~~~~~g~~v~l~~~~~~~~gkI~v~GG~~~~~~~~~~~~ 273 (517)
+|++|+.. ...+..||+..+.-+. + .+++ .....+ +.+.+ ++ -..+++++|+-- ...++.....-
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~-~-~~~~~s~~g~~~~~~---sGl~~-~~-~D~~grL~vv~~-~~~af~~~g~~ 95 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFN-V-VIDGASSNGDGEQQM---SGLSL-LT-HDNSKRLFAVMK-NAKSFNFADQS 95 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEE-E-CCTTTCCSSCCSEEE---EEEEE-SS-SSSCCEEEEEEE-ETTTTCTTSCC
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEE-E-ecCCccccCCCccee---eEEEE-ec-cCCCCcEEEEEc-ccccccccccc
Confidence 45555544 3567789998765442 3 2332 111111 22222 00 001589999721 10111100000
Q ss_pred CCCCCceeEEEec---CCCCCceec--CCCcc---------eeeeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEE
Q 044265 274 TPAHGSCGRIIAT---SADPTWEME--DMPFG---------RIMGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVL 339 (517)
Q Consensus 274 ~~a~~s~~~id~~---~~~~~W~~~--~m~~~---------R~~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~ 339 (517)
......+.+||+. .....|... ..... ...-++++=++|.+||++-... ..+..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------------~~I~r 163 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------------PAIAR 163 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------------CEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------------CeEEE
Confidence 0123557788876 334556542 11111 2234556668999999854320 13677
Q ss_pred EeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCC
Q 044265 340 YRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 340 YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
+||+...-..|-.-.+-...|..-.-.+..|||+.|++-..
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 78875422345432222223433333455789977666543
No 232
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=71.84 E-value=15 Score=38.52 Aligned_cols=131 Identities=14% Similarity=0.011 Sum_probs=70.7
Q ss_pred eEEEEECCCCCeE-EccccCCCcccce--eecCCC-cEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc-CcC--
Q 044265 70 HSAILDLQTNQIR-PLMILTDTWCSSG--QILADG-TVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV-NGR-- 142 (517)
Q Consensus 70 ~~~~yDp~t~~w~-~l~~~~~~~c~~~--~~l~dG-~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~-~~R-- 142 (517)
.+.+||..+++-. .....+.....+. ..-++| .++++|+.+ ..+++||.. +.+-. ..+. ..+
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D---~tvklWD~~----~~~~~----~~~~~~~~~~ 356 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD---GYFYIFNPK----DIATT----KTTVSRFRGS 356 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT---SEEEEECGG----GHHHH----CEEEEECSCC
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC---CeEEEEECC----CCCcc----cccccccccC
Confidence 5789999865311 1112233322222 234577 899999875 689999986 22110 0011 111
Q ss_pred ccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEECC--ceEEEeCCC
Q 044265 143 WYGTDQILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND--KAVMYDYET 219 (517)
Q Consensus 143 ~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~--~~~~ydp~t 219 (517)
.-.+++..++++.++.|+.+ .++.+| .....-.. . +.. +... -..+...++|+.++.|+. .+.+||+..
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d-~tv~lwd~~~~~~~~-~-l~g----H~~~-V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGA-SSLRAVPSRAAFAVH-P-LVS----RETT-ITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp SCCCEEEETTTTEEEEECSS-SEEEEEETTCTTCCE-E-EEE----CSSC-EEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred cccceEeCCCcCeEEEeCCC-CcEEEEECcccccce-e-eec----CCCc-eEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 12356777889998888765 467777 44322110 0 100 0001 112444679998888874 577788754
No 233
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=71.72 E-value=1.1e+02 Score=32.67 Aligned_cols=62 Identities=13% Similarity=0.035 Sum_probs=39.0
Q ss_pred cceeecCCCcEEEecCCCCCC--CeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCC
Q 044265 93 SSGQILADGTVLQTGGDLDGY--KKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKG 162 (517)
Q Consensus 93 ~~~~~l~dG~l~v~GG~~~g~--~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~ 162 (517)
.+.++.+||+.++++....|. ..++++|.. +.+.... .+...+ ..+.+..+||+-++.+..+
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~----tg~~~~~---~~~~~~-~~~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD----GAKELPD---VLERVK-FSCMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETT----TTEEEEE---EEEEEC-SCCEEECTTSSEEEEEECC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECC----CCCCCcc---cccCcc-cceEEEEeCCCEEEEEEEC
Confidence 345678999988876543333 389999998 6666543 122112 3456677899877766543
No 234
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=70.90 E-value=75 Score=34.38 Aligned_cols=127 Identities=9% Similarity=-0.032 Sum_probs=65.9
Q ss_pred EEEEECCCCCeEEcccc--C-CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 71 SAILDLQTNQIRPLMIL--T-DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~--~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
..+||+.+++++..... . .....+.....+|+|++.. . ..+.+|||. +.++.......|+... -.+.
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~----~Gl~~~~~~----~~~~~~~~~~gl~~~~-i~~i 564 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H----GGVMRINPK----DESQQSISFGSFSNNE-ILSM 564 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----TEEEEECC------CCCCBCCCCC---CC-EEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----CceEEEecC----CCceEEecccCCCccc-eEEE
Confidence 45789999888876321 1 1111223344678998754 2 247889998 5555443111233222 2233
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceE-EEccCCcEEEEECCceEEEeCCC
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYV-HLLPNGHLFIFANDKAVMYDYET 219 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~-~~~~~G~iyv~Gg~~~~~ydp~t 219 (517)
+. .+|++++... ..+-+| |.+.+..... ++. ..+... ....+|+||.-+.+...+|||+.
T Consensus 565 ~~-~~g~lWi~t~---~Gl~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 565 TC-VKNSIWVSTT---NGLWIIDRKTMDARQQN-MTN-------KRFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp EE-ETTEEEEEES---SCEEEEETTTCCEEEC---CC-------CCCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred EE-CCCCEEEECC---CCeEEEcCCCceeEEec-CCC-------CceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 33 4788887542 335666 7765543211 111 112222 23358999987778888999974
No 235
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=69.55 E-value=15 Score=38.91 Aligned_cols=129 Identities=21% Similarity=0.174 Sum_probs=68.1
Q ss_pred CCCCceeccCCCCCccccccceeeecCCCcEEEecCCCccccccCCCCCCceeeEEEeCCccCCCCCCCCCceecCC-ce
Q 044265 344 QPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPHYFYKFNAEFPTELRIEAFSPEYLSSDRANLRPVIEEIP-ET 422 (517)
Q Consensus 344 t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~~~~~~~~~~~~~~~vE~y~P~yl~~~~~~~RP~i~~~p-~~ 422 (517)
.+.|++|+....+.......+..+.++||+|+++.-.. .......|....|... .... .+| .+
T Consensus 305 ~D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-----------~~i~~~~~~~~~l~~~----~~~~-~~~~~~ 368 (601)
T 1w8o_A 305 CDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-----------TGIRYANFNLAWLGGI----CAPF-TIPDVA 368 (601)
T ss_dssp SSTTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-----------SEEEEEEECHHHHTBC----SCCE-ECCCEE
T ss_pred CCCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-----------CcceEEEecHHHhccc----cCCC-cCccce
Confidence 35577998643222122222344557999998885321 1334567777777543 1112 333 56
Q ss_pred eecCCeEEEEEEecCCc---eeeEEEEEecCCcccccCcCCcceEEeeecccccCCCC-cEEEEEeCCCCCCcCCCcceE
Q 044265 423 VRYGEAFDVFVTVPLPV---VGILEVNLGNAPFATHSFQQGQRLVKITVTPSVPDANG-RYRVGCTAPPNGAVAPPGYYM 498 (517)
Q Consensus 423 ~~~g~~~~v~~~~~~~~---~~~~~v~l~~~~~~TH~~~~~qR~~~l~~~~~~~~~~~-~~~~~v~~P~~~~~~ppG~ym 498 (517)
+..|++++|+++...+. ....+++|..+...+=. - .+.. ...+.+ +..++|++|.. +.+|.|+
T Consensus 369 ~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~------~-~~~~---~~~g~~~t~~~~vt~~~~---~~~g~y~ 435 (601)
T 1w8o_A 369 LEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQ------G-SVEP---LMPGRQAKGQVTITVPAG---TTPGRYR 435 (601)
T ss_dssp ECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEE------E-EECC---BCTTCEEEEEEEEECCTT---CCCEEEE
T ss_pred ecCCceeEEEEEEECCCceeccCceEEEecCCCcEEe------c-cccc---cCCCCceEEEEEEecCCC---CCCCcEE
Confidence 88898888777654321 12256776665544411 1 1111 112322 23347778864 4589998
Q ss_pred EEE
Q 044265 499 AFV 501 (517)
Q Consensus 499 lf~ 501 (517)
|=+
T Consensus 436 l~~ 438 (601)
T 1w8o_A 436 VGA 438 (601)
T ss_dssp EEE
T ss_pred eeE
Confidence 844
No 236
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=69.11 E-value=53 Score=34.58 Aligned_cols=90 Identities=12% Similarity=0.060 Sum_probs=49.7
Q ss_pred eEEEEECCCCCeEEccccCCCc--------ccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc
Q 044265 70 HSAILDLQTNQIRPLMILTDTW--------CSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG 141 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~--------c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~ 141 (517)
....+|+.+++++.+...+... ....++.++|++++.+.. +...+..+|.. +.....+ . .. .
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~----~~~~~~l--~-~~-~ 335 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE----SGELVDA--A-GP-W 335 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT----TTEEEEC--C-SS-C
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC----CCcEEEe--c-CC-C
Confidence 5778898889998876532221 123344578999888765 55677777876 4555554 1 11 1
Q ss_pred CccceeEEcCCCcEEEEcCCCCCceEEe
Q 044265 142 RWYGTDQILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 142 R~~~s~~~L~dG~v~vvGG~~~~~~E~y 169 (517)
..........+++++++.+......++|
T Consensus 336 ~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 336 TEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp CEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 1222221232445555555443344555
No 237
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=68.68 E-value=39 Score=31.94 Aligned_cols=100 Identities=13% Similarity=0.066 Sum_probs=54.1
Q ss_pred eeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCc
Q 044265 23 SMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGT 102 (517)
Q Consensus 23 ~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~ 102 (517)
..+.++-++|++|+.+-.. + .+..||+.++ ........ ....+.++..+|+
T Consensus 34 pegia~~~~g~lyv~d~~~----------~-----------------~I~~~d~~g~-~~~~~~~~-~~p~gia~~~dG~ 84 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEV----------G-----------------EIVSITPDGN-QQIHATVE-GKVSGLAFTSNGD 84 (306)
T ss_dssp EEEEEECTTSCEEEEETTT----------T-----------------EEEEECTTCC-EEEEEECS-SEEEEEEECTTSC
T ss_pred cceEEECCCCCEEEEeCCC----------C-----------------eEEEECCCCc-eEEEEeCC-CCceeEEEcCCCc
Confidence 3455666789999886321 1 3567788754 32221111 1223445667999
Q ss_pred EEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEE
Q 044265 103 VLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIIL 158 (517)
Q Consensus 103 l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vv 158 (517)
+||+-...+ ...+..||+. +.+.... ..+...|.-...+...++++|+.
T Consensus 85 l~vad~~~~-~~~v~~~d~~----~g~~~~~--~~~~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 85 LVATGWNAD-SIPVVSLVKS----DGTVETL--LTLPDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp EEEEEECTT-SCEEEEEECT----TSCEEEE--EECTTCSCEEEEEESSSSEEEEE
T ss_pred EEEEeccCC-cceEEEEcCC----CCeEEEE--EeCCCccccCcccccCCCcEEEE
Confidence 998764321 1357778876 5555554 33333444344444545555553
No 238
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=67.32 E-value=83 Score=29.51 Aligned_cols=109 Identities=12% Similarity=0.086 Sum_probs=57.8
Q ss_pred cceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCC-CceEEe-C
Q 044265 93 SSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGA-NTVEYY-P 170 (517)
Q Consensus 93 ~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~-~~~E~y-P 170 (517)
.+.++.++|+||++--. ...+.+||+. . ..... ..+ +..-++.++.+||++||...... ..+-.+ +
T Consensus 35 egia~~~~g~lyv~d~~---~~~I~~~d~~----g-~~~~~--~~~--~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHE---VGEIVSITPD----G-NQQIH--ATV--EGKVSGLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp EEEEECTTSCEEEEETT---TTEEEEECTT----C-CEEEE--EEC--SSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred ceEEECCCCCEEEEeCC---CCeEEEECCC----C-ceEEE--EeC--CCCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 34555679999998532 3579999987 3 22222 111 22234566777999988763321 223344 5
Q ss_pred CCCCceeccchhhccccccCCCCc-eEEEccCCcEEEEE--CCceEEEeCCCC
Q 044265 171 PRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGHLFIFA--NDKAVMYDYETN 220 (517)
Q Consensus 171 ~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~iyv~G--g~~~~~ydp~t~ 220 (517)
.+.+......+.. ..++ ..+...++++|+.- ...++++|+.++
T Consensus 103 ~~g~~~~~~~~~~-------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 103 SDGTVETLLTLPD-------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp TTSCEEEEEECTT-------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEEEEeCCC-------ccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 5444332111111 0111 12334566777764 346778898765
No 239
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=66.36 E-value=46 Score=33.28 Aligned_cols=19 Identities=16% Similarity=0.022 Sum_probs=15.8
Q ss_pred CccceeEEcCCCcEEEEcC
Q 044265 142 RWYGTDQILPDGSVIILGG 160 (517)
Q Consensus 142 R~~~s~~~L~dG~v~vvGG 160 (517)
-++|+++...||+||..|-
T Consensus 302 G~~ht~alt~~G~v~~wG~ 320 (423)
T 3mvd_K 302 GQHHTVILTTDLKCSVVGR 320 (423)
T ss_dssp CSSEEEEEETTCCEEEEEC
T ss_pred ccCeEEEEeCCCcEEEEEC
Confidence 3578888888999999984
No 240
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=64.88 E-value=39 Score=32.72 Aligned_cols=94 Identities=7% Similarity=-0.019 Sum_probs=48.4
Q ss_pred eEEEEECC-CCCeEEcccc---C-CCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceE----eccCccccC
Q 044265 70 HSAILDLQ-TNQIRPLMIL---T-DTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWV----ELDDVELVN 140 (517)
Q Consensus 70 ~~~~yDp~-t~~w~~l~~~---~-~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~----~~~~~~m~~ 140 (517)
.+.+||.. +++.+.+... . .....+.++.+||+.+.+.... ...+.+|+.... +.+.. .. ..++.
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~--~g~~~~~~~~~--~~~~~ 241 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA--GNRICEYVIDPA--THMPVYTHHSF--PLIPP 241 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTT--TCCEEEEEEEE--ESSCT
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC--CCeEEEEEEeCC--CCcEEEccceE--EcCCC
Confidence 57788887 7776544321 1 2223345677899765554432 246777653310 33332 12 11221
Q ss_pred c----C-------ccceeE-EcCCCcEEEEcCCCCC-----ceEEe
Q 044265 141 G----R-------WYGTDQ-ILPDGSVIILGGKGAN-----TVEYY 169 (517)
Q Consensus 141 ~----R-------~~~s~~-~L~dG~v~vvGG~~~~-----~~E~y 169 (517)
. . +-..++ .-+||+.+.++..... ++.+|
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~ 287 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGF 287 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEE
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEE
Confidence 1 1 234456 6789986555544332 57777
No 241
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=63.08 E-value=38 Score=33.44 Aligned_cols=169 Identities=14% Similarity=0.150 Sum_probs=77.5
Q ss_pred CCCceEEEccCCcEEEEEC--------CceEEEeCC--CCeEEEecCCCCCCCCCCCC--CCceeeeecc-cCccccEEE
Q 044265 191 NLYPYVHLLPNGHLFIFAN--------DKAVMYDYE--TNKIAREYPPLDGGPRNYPS--AGSSAMLALE-GDFATAVIV 257 (517)
Q Consensus 191 ~~yp~~~~~~~G~iyv~Gg--------~~~~~ydp~--t~~w~~~~p~~p~~~r~~~~--~g~~v~l~~~-~~~~~gkI~ 257 (517)
..||....++||.|++..- ....+|--. ..+|.+ +..+......+.. ......+|.. ....+|+|+
T Consensus 23 ~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~~-~~~v~~~~~g~~~~~~P~l~~lp~~v~~~~~G~ll 101 (355)
T 3a72_A 23 TLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWNE-ISRVHDTVNGYGLRYQPFLYSLPERVGSFKKGTLL 101 (355)
T ss_dssp EEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCEE-EEEECCTTTSSCEEEEEEEEECSSCBTTBCTTCEE
T ss_pred CccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcCC-CcccCCCcCCcccccCCcEEecCcccccCCCCcEE
Confidence 4578888999999998631 223344332 357874 2222210000100 0011112200 011267887
Q ss_pred EEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-C-----CCcc-----ee-eeeeEEecCCcEEEEcCccCCCC
Q 044265 258 VCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-D-----MPFG-----RI-MGDMVMLPTGDVLIINGAQAGTQ 325 (517)
Q Consensus 258 v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~-----m~~~-----R~-~~~~v~lpdG~v~v~GG~~~g~~ 325 (517)
++|-... .. .....+..+.-.|...+|+.. . .+.+ .. +. .+.+.+|+|++.-....+..
T Consensus 102 ~~~~~~~-~d-------~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~~~~G~l~~~~~~~~~~~ 172 (355)
T 3a72_A 102 LAGSSIP-TD-------LSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEP-FLLANKGKLICYYSDQRDNA 172 (355)
T ss_dssp EEEEECC-TT-------CCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEEEECCCTT
T ss_pred EEEeeec-CC-------CCCceEEEEEECCCCccCccCccccccCccccccCCCccccc-eEEccCCeEEEEECCCCCCC
Confidence 7742110 00 011123334445657889864 3 2211 12 22 35667999988753221100
Q ss_pred CcccCCCCccccEEEeCCCCCCceeccCCCCC-----ccccccceeeecCCCcEEEe
Q 044265 326 GFEMASNPCLFPVLYRPTQPAGLRFMTLNPGT-----IPRMYHSTANLLPDGRVLIA 377 (517)
Q Consensus 326 g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~-----~~R~yhs~a~ll~dG~V~v~ 377 (517)
... +....--.++ |++|+...... ..|.....++-++||+++++
T Consensus 173 -----~~~--~~~~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 173 -----TYG--QTMVHQVTND-LKNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp -----TCS--CEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred -----CCC--cEEEEEECCC-CCCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 000 1111122344 67997644321 12333445667899998776
No 242
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=62.64 E-value=1.5e+02 Score=30.94 Aligned_cols=82 Identities=10% Similarity=0.153 Sum_probs=43.2
Q ss_pred EEEEEC-CCCC--eEEccccC-----CCccc---ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc
Q 044265 71 SAILDL-QTNQ--IRPLMILT-----DTWCS---SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV 139 (517)
Q Consensus 71 ~~~yDp-~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~ 139 (517)
+..+|. +|++ |+.-.... ...|. .+.++.+++||+.... ..+..+|..++ +..|+... ....
T Consensus 75 v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~tG--~~~W~~~~-~~~~ 147 (571)
T 2ad6_A 75 TYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN----GHLLALDAKTG--KINWEVEV-CDPK 147 (571)
T ss_dssp EEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----SEEEEEETTTC--CEEEEEEC-CCGG
T ss_pred EEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC----CEEEEEECCCC--CEEEEecC-CCCC
Confidence 667888 7776 66532211 12232 2334567888876442 46888998854 55797531 1111
Q ss_pred Cc-CccceeEEcCCCcEEEEcC
Q 044265 140 NG-RWYGTDQILPDGSVIILGG 160 (517)
Q Consensus 140 ~~-R~~~s~~~L~dG~v~vvGG 160 (517)
.. ....+.++ .+|+||+..+
T Consensus 148 ~~~~~~~~P~v-~~g~v~vg~~ 168 (571)
T 2ad6_A 148 VGSTLTQAPFV-AKDTVLMGCS 168 (571)
T ss_dssp GTCBCCSCCEE-ETTEEEEECB
T ss_pred ccceeccCCEE-ECCEEEEEec
Confidence 11 11122233 3888877543
No 243
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=61.58 E-value=1.3e+02 Score=30.23 Aligned_cols=133 Identities=12% Similarity=0.181 Sum_probs=70.1
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCc-EEEecCCCC-CCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGT-VLQTGGDLD-GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~v~GG~~~-g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+..+|+.+++.+.+..... ...+.++..+|+ ||++..... ....+..+++. ..|... ..+..-..-+++
T Consensus 160 ~I~~id~~~~~v~~~~~~~~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-----g~~~~~--~~l~~~~~p~gi 231 (430)
T 3tc9_A 160 PTRLIDFEKEYVSTVYSGLS-KVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-----SGFKVI--TELTKGQNCNGA 231 (430)
T ss_dssp EEEEEETTTTEEEEEECCCS-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-----GTSCSE--EEEEECSSCCCE
T ss_pred cEEEEECCCCEEEEEecCCC-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-----Cceeee--eeeccCCCceEE
Confidence 46789999888877654222 222445667887 888864322 12356667765 234311 112222333556
Q ss_pred EEcC-CCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCc-eEEEccCCc-EEEEE--CCceEEEeCC
Q 044265 148 QILP-DGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYP-YVHLLPNGH-LFIFA--NDKAVMYDYE 218 (517)
Q Consensus 148 ~~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~G--g~~~~~ydp~ 218 (517)
++-+ +|+||+.--. ...+..| +..........+. ....| ++++-++|+ ||+.- ++.+.+||+.
T Consensus 232 avdp~~g~lyv~d~~-~~~V~~~~~~~~~~~~~~~~~-------~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 232 ETHPINGELYFNSWN-AGQVFRYDFTTQETTPLFTIQ-------DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECTTTCCEEEEETT-TTEEEEEETTTTEEEEEEECS-------SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEeCCCCEEEEEECC-CCEEEEEECCCCcEEEEEEcC-------CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 7777 7999987432 2345666 5433221110000 01123 355667888 88773 3456665544
No 244
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=61.45 E-value=1e+02 Score=28.63 Aligned_cols=77 Identities=9% Similarity=0.005 Sum_probs=43.0
Q ss_pred EEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCc--CccceeE
Q 044265 71 SAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNG--RWYGTDQ 148 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~--R~~~s~~ 148 (517)
+..||+ +++.+.+... .....+.+...+|++++... +...+.+||+. .+.+.+. ...... ..-...+
T Consensus 69 i~~~~~-~g~~~~~~~~-~~~~~gl~~d~dG~l~v~~~---~~~~v~~~~~~-----g~~~~~~-~~~~~~~~~~~~~i~ 137 (305)
T 3dr2_A 69 VLGWRE-DGTVDVLLDA-TAFTNGNAVDAQQRLVHCEH---GRRAITRSDAD-----GQAHLLV-GRYAGKRLNSPNDLI 137 (305)
T ss_dssp EEEEET-TSCEEEEEES-CSCEEEEEECTTSCEEEEET---TTTEEEEECTT-----SCEEEEE-CEETTEECSCCCCEE
T ss_pred EEEEeC-CCCEEEEeCC-CCccceeeECCCCCEEEEEC---CCCEEEEECCC-----CCEEEEE-eccCCCccCCCCCEE
Confidence 567787 4555544322 22334456677999888642 22578889885 2343330 011111 1123467
Q ss_pred EcCCCcEEEE
Q 044265 149 ILPDGSVIIL 158 (517)
Q Consensus 149 ~L~dG~v~vv 158 (517)
+-+||++|+.
T Consensus 138 ~d~dG~l~~t 147 (305)
T 3dr2_A 138 VARDGAIWFT 147 (305)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCEEEe
Confidence 7789999986
No 245
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=59.23 E-value=1.2e+02 Score=28.66 Aligned_cols=136 Identities=13% Similarity=0.043 Sum_probs=68.2
Q ss_pred EEEEECCCCCeEEccccC----CCcccceeecCCCcEEEecCCC---CCCCeEEEecCCCCCCCCceEeccCccccCcCc
Q 044265 71 SAILDLQTNQIRPLMILT----DTWCSSGQILADGTVLQTGGDL---DGYKKIRKFSPCEANGLCDWVELDDVELVNGRW 143 (517)
Q Consensus 71 ~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~l~v~GG~~---~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~ 143 (517)
..+||+.+++++.+.... ..+.....+.++|++|+..... .....+.+|| . .+.... ...+ ..
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~-----g~~~~~-~~~~---~~ 180 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K-----GKVTKL-FADI---SI 180 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T-----TEEEEE-EEEE---SS
T ss_pred EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C-----CcEEEe-eCCC---cc
Confidence 678899999887664321 1233445677899988754211 1124567777 3 223322 0111 12
Q ss_pred cceeEEcCCCc-EEEEcCCCCCceEEe-CC--CC-CceeccchhhccccccCCCCce-EEEccCCcEEEEE--CCceEEE
Q 044265 144 YGTDQILPDGS-VIILGGKGANTVEYY-PP--RN-GAVSFPFLADVEDKQMDNLYPY-VHLLPNGHLFIFA--NDKAVMY 215 (517)
Q Consensus 144 ~~s~~~L~dG~-v~vvGG~~~~~~E~y-P~--~~-~w~~~~~l~~t~~~~~~~~yp~-~~~~~~G~iyv~G--g~~~~~y 215 (517)
..+.+.-+||+ +|+.. .....+.+| .. +. .......+... ......|. ..+-.+|+||+.. +..+.+|
T Consensus 181 ~~~i~~s~dg~~lyv~~-~~~~~I~~~d~~~~~Gl~~~~~~~~~~~---~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVD-TKVNRLMRVPLDARTGLPTGKAEVFIDS---TGIKGGMDGSVCDAEGHIWNARWGEGAVDRY 256 (326)
T ss_dssp EEEEEECTTSCEEEEEE-TTTCEEEEEEBCTTTCCBSSCCEEEEEC---TTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred cCCeEEcCCCCEEEEEE-CCCCEEEEEEcccccCCcccCceEEEEC---CCCCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence 23556667886 45543 333456666 32 22 11000000000 00011232 3344689999876 5678999
Q ss_pred eCCCC
Q 044265 216 DYETN 220 (517)
Q Consensus 216 dp~t~ 220 (517)
|+...
T Consensus 257 d~~g~ 261 (326)
T 2ghs_A 257 DTDGN 261 (326)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 99543
No 246
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=58.84 E-value=1e+02 Score=29.28 Aligned_cols=75 Identities=15% Similarity=0.060 Sum_probs=45.1
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc----CcCccc
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV----NGRWYG 145 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~----~~R~~~ 145 (517)
.+..||+.+++.+...... ...+.+...+|++++... ..+.+||+. +.+...+ .... ..| -.
T Consensus 72 ~i~~~d~~~~~~~~~~~~~--~v~~i~~~~dg~l~v~~~-----~gl~~~d~~----~g~~~~~--~~~~~~~~~~~-~~ 137 (326)
T 2ghs_A 72 ELHELHLASGRKTVHALPF--MGSALAKISDSKQLIASD-----DGLFLRDTA----TGVLTLH--AELESDLPGNR-SN 137 (326)
T ss_dssp EEEEEETTTTEEEEEECSS--CEEEEEEEETTEEEEEET-----TEEEEEETT----TCCEEEE--ECSSTTCTTEE-EE
T ss_pred EEEEEECCCCcEEEEECCC--cceEEEEeCCCeEEEEEC-----CCEEEEECC----CCcEEEE--eeCCCCCCCCC-CC
Confidence 4678999888766543221 222344567999888652 358899987 5566544 2211 112 23
Q ss_pred eeEEcCCCcEEEE
Q 044265 146 TDQILPDGSVIIL 158 (517)
Q Consensus 146 s~~~L~dG~v~vv 158 (517)
..++-++|++|+.
T Consensus 138 ~i~~d~~G~l~v~ 150 (326)
T 2ghs_A 138 DGRMHPSGALWIG 150 (326)
T ss_dssp EEEECTTSCEEEE
T ss_pred CEEECCCCCEEEE
Confidence 4566678988774
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=55.70 E-value=2.1e+02 Score=30.43 Aligned_cols=58 Identities=14% Similarity=0.156 Sum_probs=34.0
Q ss_pred eEEEEECCCCC--eEEccccC-----CCccc---ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEec
Q 044265 70 HSAILDLQTNQ--IRPLMILT-----DTWCS---SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVEL 133 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~ 133 (517)
.+..+|.+|++ |+.-.... ...|. .+..+.+++||+.... ..+..+|..++ +..|+..
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~tG--~~~W~~~ 144 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD----GRLIALDAKTG--KAIWSQQ 144 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT----SEEEEEETTTC--CEEEEEE
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC----CEEEEEECCCC--CEeeeec
Confidence 36678888876 66532211 12231 2334567777775432 57889998854 5678764
No 248
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=51.59 E-value=45 Score=32.48 Aligned_cols=74 Identities=16% Similarity=0.012 Sum_probs=45.4
Q ss_pred ceEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccc-cCcCcccee
Q 044265 69 AHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVEL-VNGRWYGTD 147 (517)
Q Consensus 69 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m-~~~R~~~s~ 147 (517)
..+.+||.++++-...-.... +.+.++.+||+.+.+.+. +++.+||.. +.+-+.+ ..+ ...+.-...
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~----~~v~v~D~~----t~~l~~~--~~i~~~G~~P~~~ 353 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG----GNVNVYDIS----QPEPKLL--RTIEGAAEASLQV 353 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS----SCEEEEECS----SSSCEEE--EEETTSCSSEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC----CeEEEEECC----CCcceee--EEeccCCCCcEEE
Confidence 367889999887654322223 666777889986666552 689999987 4411443 333 344444455
Q ss_pred EEcCCCc
Q 044265 148 QILPDGS 154 (517)
Q Consensus 148 ~~L~dG~ 154 (517)
+..|||+
T Consensus 354 ~~~p~G~ 360 (361)
T 2oiz_A 354 QFHPVGG 360 (361)
T ss_dssp EECCCSC
T ss_pred EecCCCC
Confidence 6666764
No 249
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=50.64 E-value=22 Score=31.66 Aligned_cols=34 Identities=41% Similarity=0.899 Sum_probs=25.3
Q ss_pred CcEEEEEeCCCCCCcCCCcceEEEEEc-----------CC----------cCcccEEEEee
Q 044265 477 GRYRVGCTAPPNGAVAPPGYYMAFVVN-----------QG----------VPSVARWVHLI 516 (517)
Q Consensus 477 ~~~~~~v~~P~~~~~~ppG~ymlf~~~-----------~g----------vPS~a~~v~i~ 516 (517)
+..+-.+++|. -|||||+|-| +| ||..+-||+|.
T Consensus 278 gaftksitlpk------tgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvnit 332 (336)
T 2vov_A 278 GAFTKSITLPK------TGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNIT 332 (336)
T ss_dssp TEEEEEEECSS------SEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEEE
T ss_pred ceeeeeeeccC------cceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEEE
Confidence 35666677784 4999999853 22 79999999885
No 250
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=49.52 E-value=28 Score=35.20 Aligned_cols=69 Identities=14% Similarity=0.027 Sum_probs=42.8
Q ss_pred ccceeecCC-CcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-
Q 044265 92 CSSGQILAD-GTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY- 169 (517)
Q Consensus 92 c~~~~~l~d-G~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y- 169 (517)
......-++ +.++++|+.+ ..+++||.. +..-.. ........-.+++.-++|+.+++|+.+ .++.+|
T Consensus 152 V~~v~~~p~~~~~las~s~D---g~v~iwD~~----~~~~~~---~~~~~~~~v~~v~wspdg~~lasgs~d-g~v~iwd 220 (434)
T 2oit_A 152 VIDMKWNPTVPSMVAVCLAD---GSIAVLQVT----ETVKVC---ATLPSTVAVTSVCWSPKGKQLAVGKQN-GTVVQYL 220 (434)
T ss_dssp EEEEEECSSCTTEEEEEETT---SCEEEEEES----SSEEEE---EEECGGGCEEEEEECTTSSCEEEEETT-SCEEEEC
T ss_pred eEEEEECCCCCCEEEEEECC---CeEEEEEcC----CCccee---eccCCCCceeEEEEcCCCCEEEEEcCC-CcEEEEc
Confidence 334455566 7899988864 679999987 332111 111112234456677899999998865 457777
Q ss_pred CC
Q 044265 170 PP 171 (517)
Q Consensus 170 P~ 171 (517)
+.
T Consensus 221 ~~ 222 (434)
T 2oit_A 221 PT 222 (434)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 251
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=47.66 E-value=2e+02 Score=30.94 Aligned_cols=109 Identities=16% Similarity=0.038 Sum_probs=62.3
Q ss_pred ecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCCCCceEEe-CCCCCc
Q 044265 97 ILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKGANTVEYY-PPRNGA 175 (517)
Q Consensus 97 ~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~~~~~E~y-P~~~~w 175 (517)
...+|+|++.||.. +.+.+||+. +.++.......+.......+...-.+|++++.. . ..+-+| |.++..
T Consensus 479 ~d~~g~lWi~~~t~---~Gl~~~d~~----~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~--~Gl~~~~~~~~~~ 548 (758)
T 3ott_A 479 PDNEGNVWVLLYNN---KGIDKINPR----TREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H--GGVMRINPKDESQ 548 (758)
T ss_dssp ECTTSCEEEEETTC---SSEEEEETT----TTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T--TEEEEECC--CCC
T ss_pred EcCCCCEEEEccCC---CCcEEEeCC----CCceEEecCCCcCCCcccceEEECCCCCEEEEe-c--CceEEEecCCCce
Confidence 34578999866653 347789998 677766411112211222345555679998743 2 246677 776555
Q ss_pred eecc--chhhccccccCCCCceEEEccCCcEEEEECCceEEEeCCCCeEE
Q 044265 176 VSFP--FLADVEDKQMDNLYPYVHLLPNGHLFIFANDKAVMYDYETNKIA 223 (517)
Q Consensus 176 ~~~~--~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~~~~~ydp~t~~w~ 223 (517)
.... .++ .+ .....+..+|+|++...+...+|||++.+..
T Consensus 549 ~~~~~~gl~-------~~-~i~~i~~~~g~lWi~t~~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 549 QSISFGSFS-------NN-EILSMTCVKNSIWVSTTNGLWIIDRKTMDAR 590 (758)
T ss_dssp CBCCCCC----------C-CEEEEEEETTEEEEEESSCEEEEETTTCCEE
T ss_pred EEecccCCC-------cc-ceEEEEECCCCEEEECCCCeEEEcCCCceeE
Confidence 4221 111 11 1122233589999988888899999987754
No 252
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=47.18 E-value=1.9e+02 Score=28.32 Aligned_cols=123 Identities=15% Similarity=-0.033 Sum_probs=63.4
Q ss_pred CceEEcccCcccceeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCC
Q 044265 10 GTWELVLADAGISSMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTD 89 (517)
Q Consensus 10 g~W~~~~~~~~~~~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~ 89 (517)
.+.+.++. -.-.+.++++++||++|+..... | .+..+++.+++.+.+...+.
T Consensus 22 ~~~~~va~-gL~~P~~ia~~pdG~llVter~~----------G-----------------~I~~v~~~~g~~~~v~~~~~ 73 (347)
T 3das_A 22 KVLRTVAT-GLNSPWGLAPLPGGDLLVSSRDE----------A-----------------TITRVDAKTGRKTELGEVPG 73 (347)
T ss_dssp EEEEEEEC-CCSSEEEEEECTTSCEEEEETTT----------C-----------------EEEEECTTTCCEEEEEECTT
T ss_pred ceeEEeec-CCCCceEEEEcCCCcEEEEEecC----------C-----------------EEEEEECCCCcEeeecccCc
Confidence 45555653 34456788899999999986411 3 24456666666554432222
Q ss_pred Ccc-----cceeec-C----CCcEEEecCCCCCCCeEEEecCCCCC----CCCceEeccCccccC--cCccceeEEcCCC
Q 044265 90 TWC-----SSGQIL-A----DGTVLQTGGDLDGYKKIRKFSPCEAN----GLCDWVELDDVELVN--GRWYGTDQILPDG 153 (517)
Q Consensus 90 ~~c-----~~~~~l-~----dG~l~v~GG~~~g~~~v~~ydp~~~~----~t~~W~~~~~~~m~~--~R~~~s~~~L~dG 153 (517)
.+. ..+.++ + ||.||+.=-.. ..+.+..|....++ .......+ -..++. ..+....+.-+||
T Consensus 74 v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-~~~~v~R~~~~~~~~~~~~~~~~~~i-~~~~p~~~~H~g~~l~fgpDG 151 (347)
T 3das_A 74 VSPSGEGGLLGIALSPDYASDHMVYAYFTSA-SDNRIVRMLYDEKKPSGEQLGAPDTV-FRGIPKGVIHNGGRIAFGPDK 151 (347)
T ss_dssp CCCBTTBSEEEEEECTTHHHHCEEEEEEECS-SSEEEEEEEBCTTSCTTCCBCCCEEE-EEEECCCSSCCCCCEEECTTS
T ss_pred eeecCCCCceeeEeccccccCCEEEEEEecC-CCCEEEEEEeCCCCcccccCCCcEEE-EEcCCCCCCccCccccCCCCC
Confidence 221 122333 3 58899851000 12456667654210 00112111 011222 2334457777899
Q ss_pred cEEEEcCCC
Q 044265 154 SVIILGGKG 162 (517)
Q Consensus 154 ~v~vvGG~~ 162 (517)
++||.=|..
T Consensus 152 ~Lyvt~Gd~ 160 (347)
T 3das_A 152 MLYAGTGES 160 (347)
T ss_dssp CEEEECBCT
T ss_pred CEEEEECCC
Confidence 999986643
No 253
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=46.43 E-value=1.6e+02 Score=29.52 Aligned_cols=60 Identities=13% Similarity=0.224 Sum_probs=36.2
Q ss_pred cccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCc-EEEEc
Q 044265 91 WCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGS-VIILG 159 (517)
Q Consensus 91 ~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~-v~vvG 159 (517)
.+.+.++.+ +|.||++-- +...+.+||+. +..-... ..+....|-...++-++|+ +|++-
T Consensus 227 ~p~giavdp~~g~lyv~d~---~~~~V~~~~~~----~~~~~~~--~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSW---NAGQVFRYDFT----TQETTPL--FTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp SCCCEEECTTTCCEEEEET---TTTEEEEEETT----TTEEEEE--EECSSSSCCEEEEECTTSSEEEEEE
T ss_pred CceEEEEeCCCCEEEEEEC---CCCEEEEEECC----CCcEEEE--EEcCCCCcceeEEEcCCCCEEEEEE
Confidence 345566777 899998743 23579999997 3333222 1222222333567778888 88874
No 254
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=45.69 E-value=1.6e+02 Score=29.81 Aligned_cols=121 Identities=13% Similarity=0.101 Sum_probs=62.2
Q ss_pred ceEEcccCcccceeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCC
Q 044265 11 TWELVLADAGISSMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDT 90 (517)
Q Consensus 11 ~W~~~~~~~~~~~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~ 90 (517)
+.+.+.. -.-.+..++.+++|++||..... | .+.++++.+++.+.+......
T Consensus 18 ~~~~~a~-~l~~P~~~a~~pdG~l~V~e~~g----------g-----------------~I~~~~~~~g~~~~~~~~~~~ 69 (454)
T 1cru_A 18 DKKVILS-NLNKPHALLWGPDNQIWLTERAT----------G-----------------KILRVNPESGSVKTVFQVPEI 69 (454)
T ss_dssp CEEEEEC-CCSSEEEEEECTTSCEEEEETTT----------C-----------------EEEEECTTTCCEEEEEECTTC
T ss_pred EEEEEEC-CCCCceEEEEcCCCcEEEEEcCC----------C-----------------EEEEEECCCCcEeEEecCCcc
Confidence 4555553 23456778889999999986421 1 234455555555443332222
Q ss_pred ccc--------ceeecC----CCcEEEecCC------CC---CCCeEEEecCCCCCCCCce---EeccCccccC--cCcc
Q 044265 91 WCS--------SGQILA----DGTVLQTGGD------LD---GYKKIRKFSPCEANGLCDW---VELDDVELVN--GRWY 144 (517)
Q Consensus 91 ~c~--------~~~~l~----dG~l~v~GG~------~~---g~~~v~~ydp~~~~~t~~W---~~~~~~~m~~--~R~~ 144 (517)
++. +.++.+ |+.||+.--. .. ....+..|+...+ ..+. ..+ -..++. ..+-
T Consensus 70 ~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~--~~~~~~~~~i-~~~~p~~~~H~~ 146 (454)
T 1cru_A 70 VNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKS--TDTLEKPVDL-LAGLPSSKDHQS 146 (454)
T ss_dssp CCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETT--TTEEEEEEEE-EEEECCCSSCCE
T ss_pred ccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCC--CCCcCCcEEE-EEcCCCCCCCCC
Confidence 211 233344 7899987421 00 0245666765421 1122 111 011222 2334
Q ss_pred ceeEEcCCCcEEEEcCCC
Q 044265 145 GTDQILPDGSVIILGGKG 162 (517)
Q Consensus 145 ~s~~~L~dG~v~vvGG~~ 162 (517)
..++.-+||++||.=|..
T Consensus 147 ~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 147 GRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp EEEEECTTSCEEEEECCT
T ss_pred CeEeECCCCeEEEEECCC
Confidence 556777899999986643
No 255
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=44.83 E-value=25 Score=36.77 Aligned_cols=89 Identities=6% Similarity=-0.091 Sum_probs=50.3
Q ss_pred eEEEEECCCCCeEEccccCC--CcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMILTD--TWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~--~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
.+.+||..+.+-......+. ..+...++.++++.+++|+.+ ..+++||.... .+..+ + ....-.-.++
T Consensus 334 tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d---~tv~lwd~~~~--~~~~~-l----~gH~~~V~sv 403 (524)
T 2j04_B 334 YFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGA---SSLRAVPSRAA--FAVHP-L----VSRETTITAI 403 (524)
T ss_dssp EEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSS---SEEEEEETTCT--TCCEE-E----EECSSCEEEE
T ss_pred eEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCC---CcEEEEECccc--cccee-e----ecCCCceEEE
Confidence 46778876533211001111 112345677889999988764 57999998731 11111 1 1122233456
Q ss_pred EEcCCCcEEEEcCCCCCceEEe
Q 044265 148 QILPDGSVIILGGKGANTVEYY 169 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y 169 (517)
+.-++|+.++.|+.+ .++.+|
T Consensus 404 a~Sp~g~~l~Sgs~D-gtv~lw 424 (524)
T 2j04_B 404 GVSRLHPMVLAGSAD-GSLIIT 424 (524)
T ss_dssp ECCSSCCBCEEEETT-TEEECC
T ss_pred EeCCCCCeEEEEECC-CEEEEE
Confidence 667899988887765 456666
No 256
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=44.41 E-value=57 Score=30.82 Aligned_cols=50 Identities=30% Similarity=0.452 Sum_probs=28.2
Q ss_pred CCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCC
Q 044265 99 ADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGK 161 (517)
Q Consensus 99 ~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~ 161 (517)
-||+||..|-...+.-. -|..- ...... ... -.+|+++.. ||+||..|-.
T Consensus 79 ~~G~v~~wG~n~~Gqlg----~P~~~--~~~v~~-----ia~-G~~hs~al~-~G~v~~wG~n 128 (282)
T 3qhy_B 79 KDGEVIAWGGNEDGQTT----VPAEA--RSGVDA-----IAA-GAWASYALK-DGKVIAWGDD 128 (282)
T ss_dssp ETTEEEEEECCTTSTTC----CCGGG--SSSEEE-----EEE-ETTEEEEEE-TTEEEEEECC
T ss_pred ECCEEEEeeCCCCCCCC----CCccc--CCCeEE-----EEC-cCCEEEEEe-CCeEEEecCC
Confidence 49999999965432111 02200 112222 222 236788888 9999999853
No 257
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=44.06 E-value=1.9e+02 Score=27.89 Aligned_cols=96 Identities=11% Similarity=0.148 Sum_probs=51.6
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCc-EEEecCC------CCCCCeEEEecCCCCCCCCceEeccCcccc---
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGT-VLQTGGD------LDGYKKIRKFSPCEANGLCDWVELDDVELV--- 139 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~v~GG~------~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~--- 139 (517)
.+.+||+.+++....-. .....+.++.+||+ +|++.-. .+....+.+||+. +.+-... -++.
T Consensus 32 ~v~v~D~~t~~~~~~i~--~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~----t~~~~~~--i~~~~~~ 103 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGMVP--TAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD----KLTFEKE--ISLPPKR 103 (361)
T ss_dssp EEEEEETTTCCEEEEEE--CCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT----TCCEEEE--EEECTTB
T ss_pred eEEEEECCCCeEEEEec--CCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECc----CCcEEEE--EEcCccc
Confidence 57889998887653211 11222456778886 5554310 0113569999987 4332211 1121
Q ss_pred --CcCccceeEEcCCCcEEEEcCCC-CCceEEe-CCCC
Q 044265 140 --NGRWYGTDQILPDGSVIILGGKG-ANTVEYY-PPRN 173 (517)
Q Consensus 140 --~~R~~~s~~~L~dG~v~vvGG~~-~~~~E~y-P~~~ 173 (517)
...+-...++-+||+.+.+.-.. ..++.+| ..+.
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG 141 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC
Confidence 12233456677899766665433 3567777 5443
No 258
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=44.06 E-value=1.5e+02 Score=29.08 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=36.1
Q ss_pred eeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 303 MGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 303 ~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
.|..++.-||+||..|-...|.-|.... .....+..-+.-.+ .+...+ ..-.+|+ ++|..||+||.-|.+..
T Consensus 223 ~~t~~l~~~G~v~~wG~n~~GqLG~g~~-~~~~~p~~v~~~~~--~~v~~v----~~G~~hs-~alt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGDGDYGKLGRGGS-DGCKVPMKIDSLTG--LGVVKV----ECGSQFS-VALTKSGAVYTWGKGDY 294 (389)
T ss_dssp CEEEEEETTTEEEEEECCGGGTTSSSSC-CCEEEEEECGGGTT--SCEEEE----EEETTEE-EEEETTSCEEEEECCGG
T ss_pred cEEEEEccCCEEEEEeCCCCCCCCCCCC-CCccccEEecccCC--CcEEEE----eCCCCEE-EEEeCCCeEEEEeCCCC
Confidence 4565667799999998554443222110 11111111110000 011111 1234565 45678999999998754
Q ss_pred c
Q 044265 383 Y 383 (517)
Q Consensus 383 ~ 383 (517)
.
T Consensus 295 G 295 (389)
T 3kci_A 295 H 295 (389)
T ss_dssp G
T ss_pred C
Confidence 3
No 259
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=43.86 E-value=3.2e+02 Score=29.06 Aligned_cols=58 Identities=16% Similarity=0.165 Sum_probs=33.6
Q ss_pred eEEEEECCCCC--eEEccccC-----CCccc---ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEec
Q 044265 70 HSAILDLQTNQ--IRPLMILT-----DTWCS---SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVEL 133 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~ 133 (517)
.+..+|.+|++ |+.-.... ..+|. .+..+.+++||+.... ..+..+|..++ ...|+..
T Consensus 88 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----g~l~alD~~tG--~~~W~~~ 155 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD----GRLIALDAATG--KEVWHQN 155 (677)
T ss_dssp CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT----SEEEEEETTTC--CEEEEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC----CEEEEEECCCC--CEEeeec
Confidence 36678888776 66533211 11221 2334567777776432 57889999854 5568754
No 260
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=43.65 E-value=1e+02 Score=30.71 Aligned_cols=73 Identities=11% Similarity=0.129 Sum_probs=36.9
Q ss_pred eeeeEEecCCcEEEEcCccCCCCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCCCc
Q 044265 303 MGDMVMLPTGDVLIINGAQAGTQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSNPH 382 (517)
Q Consensus 303 ~~~~v~lpdG~v~v~GG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~~~ 382 (517)
.|.+++.-||+||..|-...|.-|.+...+....+..-..-.+ +...+ ..-.+|+. +|..||+||.-|.+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~i----a~G~~hs~-alt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSV----GCGEVCSY-AVTIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEE----EEETTEEE-EEETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEE----EcCCCeEE-EEcCCCCEEEECCCCC
Confidence 4555666799999998654443332211111111111100000 12111 12346764 4578999999998765
Q ss_pred c
Q 044265 383 Y 383 (517)
Q Consensus 383 ~ 383 (517)
+
T Consensus 376 G 376 (423)
T 3mvd_K 376 N 376 (423)
T ss_dssp S
T ss_pred C
Confidence 3
No 261
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=43.51 E-value=65 Score=31.49 Aligned_cols=53 Identities=15% Similarity=0.022 Sum_probs=31.7
Q ss_pred CcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCCC
Q 044265 101 GTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGKG 162 (517)
Q Consensus 101 G~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~~ 162 (517)
+..++++|..+ ..+++||.. +..-.. ..+.....-.+++.-+||+.++++..+
T Consensus 328 ~~~~~~sgs~D--g~V~lwd~~----~~~~~~---~~~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 328 MDYFATAHSQH--GLIQLINTY----EKDSNS---IPIQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp TTEEEEEETTT--TEEEEEETT----CTTCCE---EEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred CCEEEEEECCC--CEEEEEECC----CCcEEE---EecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 44555544333 689999987 332221 123333445567888899999987643
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=43.39 E-value=2.4e+02 Score=27.44 Aligned_cols=28 Identities=14% Similarity=0.072 Sum_probs=18.7
Q ss_pred ccceeecCCCcEEEecCCCCCCCeEEEecCC
Q 044265 92 CSSGQILADGTVLQTGGDLDGYKKIRKFSPC 122 (517)
Q Consensus 92 c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 122 (517)
-.+.+..+||++|++-.. ...+..||..
T Consensus 187 ~nGIv~~pdg~~Liv~~~---~g~L~~fD~~ 214 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGG---PRALTAFDVS 214 (334)
T ss_dssp CSEEEEETTTTEEEEESS---SSSEEEEECS
T ss_pred cceEEEeCCCCEEEEEcC---CCeEEEEcCC
Confidence 445667778976666543 2568888876
No 263
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=43.06 E-value=3.4e+02 Score=29.01 Aligned_cols=58 Identities=14% Similarity=0.122 Sum_probs=33.9
Q ss_pred eEEEEECCCCC--eEEccccC-----CCccc---ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEec
Q 044265 70 HSAILDLQTNQ--IRPLMILT-----DTWCS---SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVEL 133 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~ 133 (517)
.+..+|.+|++ |+.-.... ...|. .+..+.+++||+.... ..+..+|..++ ...|...
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d----g~l~AlDa~TG--~~~W~~~ 148 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD----GRLEAIDAKTG--QRAWSVD 148 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----SEEEEEETTTC--CEEEEEE
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC----CEEEEEECCCC--CEeeeec
Confidence 36678888877 66432211 12232 2334567777775432 57889999854 5568764
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=42.39 E-value=74 Score=33.45 Aligned_cols=78 Identities=13% Similarity=-0.006 Sum_probs=44.8
Q ss_pred ceEEEEECCCCC--eEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 69 AHSAILDLQTNQ--IRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 69 ~~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
.....+|+.|++ |+.-.. .....+.....+|.||+ |.. + ..+..||..++ +..|+.. +...-+...
T Consensus 444 g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~-g~~-d--g~l~a~D~~tG--~~lw~~~----~~~~~~~~p 511 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWY-ATL-D--GYLKALDNKDG--KELWNFK----MPSGGIGSP 511 (571)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEE-ECT-T--SEEEEEETTTC--CEEEEEE----CSSCCCSCC
T ss_pred CeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEE-EcC-C--CeEEEEECCCC--CEEEEEe----CCCCcEeee
Confidence 467889999887 654221 12222333445777777 433 2 57899998854 5568643 333332222
Q ss_pred eEEcCCCcEEEE
Q 044265 147 DQILPDGSVIIL 158 (517)
Q Consensus 147 ~~~L~dG~v~vv 158 (517)
++...||++||.
T Consensus 512 ~~~~~~G~~yv~ 523 (571)
T 2ad6_A 512 MTYSFKGKQYIG 523 (571)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCEEEEE
Confidence 222259999886
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=39.58 E-value=2.5e+02 Score=28.02 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=35.9
Q ss_pred CcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCce-EeccCccccCcCccceeEEcCCCc-EEEEc
Q 044265 90 TWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDW-VELDDVELVNGRWYGTDQILPDGS-VIILG 159 (517)
Q Consensus 90 ~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W-~~~~~~~m~~~R~~~s~~~L~dG~-v~vvG 159 (517)
..+.+.++.+ +|.||+.--. ...+++||+. +.+. ..+ .......+....++-++|+ +|+.-
T Consensus 228 ~~P~giavd~~~G~lyv~d~~---~~~V~~~d~~----~g~~~~~~--~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYH---HAMISSYDPA----TGTLTEEE--VMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTT---CSEEEEECTT----TCCEEEEE--EECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEECC---CCEEEEEECC----CCeEEEEE--eccCCCCCcccEEEeCCCCEEEEEe
Confidence 3455666777 8999987432 3579999997 3443 222 1111122333567777887 77763
No 266
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=38.32 E-value=2.4e+02 Score=25.89 Aligned_cols=127 Identities=13% Similarity=0.026 Sum_probs=64.3
Q ss_pred eEEEEECCCCC--eEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQ--IRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
....||+. ++ |..- .............+|+|++.. ..+.+||+.. ...|... ..... ..+.
T Consensus 158 ~l~~~d~~-g~~~~~~~--~~~~~~~~~~~d~~g~l~v~t------~~l~~~d~~g---~~~~~~~----~~~~~-~~~~ 220 (330)
T 3hxj_A 158 YLYAINPD-GTEKWRFK--TNDAITSAASIGKDGTIYFGS------DKVYAINPDG---TEKWNFY----AGYWT-VTRP 220 (330)
T ss_dssp EEEEECTT-SCEEEEEE--CSSCCCSCCEECTTCCEEEES------SSEEEECTTS---CEEEEEC----CSSCC-CSCC
T ss_pred EEEEECCC-CCEeEEEe--cCCCceeeeEEcCCCEEEEEe------CEEEEECCCC---cEEEEEc----cCCcc-eece
Confidence 46778887 54 3322 112222233344688988865 3578888431 4567653 11111 3345
Q ss_pred EEcCCCcEEEEcCCCCCceEEe-CCCCC-ceeccchhhccccccCCCCceEEEccCCcEEEEECC-ceEEEeCCCC-eEE
Q 044265 148 QILPDGSVIILGGKGANTVEYY-PPRNG-AVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAND-KAVMYDYETN-KIA 223 (517)
Q Consensus 148 ~~L~dG~v~vvGG~~~~~~E~y-P~~~~-w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg~-~~~~ydp~t~-~w~ 223 (517)
+.-.+|.||+..- ...+-+| +.... |... .. . .......+..+|+||+.... .+.+||+... .|.
T Consensus 221 ~~~~~g~l~v~t~--~~gl~~~~~~g~~~~~~~-~~-~-------~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 221 AISEDGTIYVTSL--DGHLYAINPDGTEKWRFK-TG-K-------RIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWN 289 (330)
T ss_dssp EECTTSCEEEEET--TTEEEEECTTSCEEEEEE-CS-S-------CCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEE
T ss_pred EECCCCeEEEEcC--CCeEEEECCCCCEeEEee-CC-C-------CccccceEcCCCeEEEecCCCCEEEECCCCcEEEE
Confidence 5566788888532 1234444 32221 3211 00 0 01111233347899987655 6889998533 354
Q ss_pred E
Q 044265 224 R 224 (517)
Q Consensus 224 ~ 224 (517)
.
T Consensus 290 ~ 290 (330)
T 3hxj_A 290 F 290 (330)
T ss_dssp E
T ss_pred E
Confidence 3
No 267
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=37.60 E-value=2.9e+02 Score=26.66 Aligned_cols=28 Identities=11% Similarity=-0.103 Sum_probs=19.1
Q ss_pred ceEEcccCcccceeEEEEeeCCEEEEEec
Q 044265 11 TWELVLADAGISSMHTAVTRFNTVVLLDR 39 (517)
Q Consensus 11 ~W~~~~~~~~~~~~h~~ll~~gkv~~~gg 39 (517)
+.+.++. -...+.++++.++|++|+...
T Consensus 20 ~~~~va~-~l~~P~~ia~~pdG~l~V~e~ 47 (354)
T 3a9g_A 20 KISEVAS-DLEVPWSIAPLGGGRYLVTER 47 (354)
T ss_dssp EEEEEEC-SCSCEEEEEEEETTEEEEEET
T ss_pred EEEEEeC-CCCCCeEEEEcCCCeEEEEeC
Confidence 4445543 234567888889999999864
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=36.98 E-value=3.3e+02 Score=27.14 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=67.7
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCC-CCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLD-GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~-g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+..+|+.+++.+.+.. ......+.++..+|+||++--... ....+..+++. ..|... ..+..-+.-..++
T Consensus 163 ~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~-----~~~~~~--~~~~~~~~P~gia 234 (433)
T 4hw6_A 163 AFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA-----SGFTER--LSLCNARGAKTCA 234 (433)
T ss_dssp CEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG-----GTTCCE--EEEEECSSBCCCE
T ss_pred CEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC-----CCeecc--ccccccCCCCEEE
Confidence 36789998888877654 222334556778999998853211 12345566664 223211 1111122234466
Q ss_pred EcC-CCcEEEEcCCCCCceEEe-CCCCCc-eeccchhhccccccCCCCceEEEccCCc-EEEEE--CCceEEEeC
Q 044265 149 ILP-DGSVIILGGKGANTVEYY-PPRNGA-VSFPFLADVEDKQMDNLYPYVHLLPNGH-LFIFA--NDKAVMYDY 217 (517)
Q Consensus 149 ~L~-dG~v~vvGG~~~~~~E~y-P~~~~w-~~~~~l~~t~~~~~~~~yp~~~~~~~G~-iyv~G--g~~~~~ydp 217 (517)
+-+ +|.+|+.--. ...+..| +.+... ....... ...+-..+++-++|+ ||+.- ++.+.++|+
T Consensus 235 vd~~~G~lyv~d~~-~~~V~~~d~~~g~~~~~~~~~~------~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 235 VHPQNGKIYYTRYH-HAMISSYDPATGTLTEEEVMMD------TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp ECTTTCCEEECBTT-CSEEEEECTTTCCEEEEEEECS------CCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred EeCCCCeEEEEECC-CCEEEEEECCCCeEEEEEeccC------CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 666 7999886432 2345556 553332 1110000 001111366667887 88764 244555554
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=36.70 E-value=1e+02 Score=32.49 Aligned_cols=78 Identities=13% Similarity=-0.003 Sum_probs=44.2
Q ss_pred ceEEEEECCCCC--eEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 69 AHSAILDLQTNQ--IRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 69 ~~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
.....+|+.|++ |+.-.. .....+..+..+|.||+ |.. + ..++.||..++ ...|+.. +...-...-
T Consensus 466 G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~-g~~-d--g~l~A~D~~tG--~~lW~~~----~~~g~~a~P 533 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFT-GTG-D--GYFKAFDAKSG--KELWKFQ----TGSGIVSPP 533 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEE-ECT-T--SEEEEEETTTC--CEEEEEE----CSSCCCSCC
T ss_pred ceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEE-ECC-C--CcEEEEECCCC--CEEEEec----CCCCcccCc
Confidence 457789999987 664322 12223334455666666 433 2 57899998853 4568643 332222111
Q ss_pred eEEcCCCcEEEE
Q 044265 147 DQILPDGSVIIL 158 (517)
Q Consensus 147 ~~~L~dG~v~vv 158 (517)
++...||++||+
T Consensus 534 ~~y~~~G~qYv~ 545 (582)
T 1flg_A 534 ITWEQDGEQYLG 545 (582)
T ss_dssp EEEEETTEEEEE
T ss_pred eEEEECCEEEEE
Confidence 222249999988
No 270
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=35.83 E-value=1.4e+02 Score=27.97 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=46.7
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCC-----------------CC-------CCeEEEecCCCCC
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDL-----------------DG-------YKKIRKFSPCEAN 125 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~-----------------~g-------~~~v~~ydp~~~~ 125 (517)
...++|..+++.+.+..... .......+||+.+++.... ++ ...+.++|..
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~--- 160 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE--- 160 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT---
T ss_pred eEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC---
Confidence 46778888888777654433 3445567899866665421 01 2467788887
Q ss_pred CCCce-EeccCccccCcCccceeEEcCCCcEEEEcCC
Q 044265 126 GLCDW-VELDDVELVNGRWYGTDQILPDGSVIILGGK 161 (517)
Q Consensus 126 ~t~~W-~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~ 161 (517)
+.+. ..+ .. + .....+..+|| +++++..
T Consensus 161 -~~~~~~~l--~~---~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 161 -SEEVIEEF--EK---P-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp -TTEEEEEE--EE---E-TTCEEEEETTE-EEEEEEC
T ss_pred -CCeEEeee--cC---C-CcccccCCCCe-EEEEEec
Confidence 4555 444 22 2 34455666888 6666543
No 271
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.69 E-value=92 Score=33.06 Aligned_cols=78 Identities=10% Similarity=-0.002 Sum_probs=43.9
Q ss_pred ceEEEEECCCCC--eEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 69 AHSAILDLQTNQ--IRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 69 ~~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
.....+|+.|++ |+.-... ....+..+..+|.||+ |.. + ..++.||..++ ...|+.. +...-...-
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~-gt~-d--g~l~A~D~~tG--~~lW~~~----l~~g~~~~P 520 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFY-GTL-D--GYLKARDSDTG--DLLWKFK----IPSGAIGYP 520 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEE-ECT-T--SEEEEEETTTC--CEEEEEE----CSSCCCSCC
T ss_pred CeEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEE-ECC-C--CeEEEEECCCC--CEEEEee----CCCCcEecc
Confidence 467788999987 6642211 1222333445666666 433 2 57899999854 5568643 333222111
Q ss_pred eEEcCCCcEEEE
Q 044265 147 DQILPDGSVIIL 158 (517)
Q Consensus 147 ~~~L~dG~v~vv 158 (517)
++...||++||+
T Consensus 521 ~~y~~~G~qyv~ 532 (599)
T 1w6s_A 521 MTYTHKGTQYVA 532 (599)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEeCCEEEEE
Confidence 222249999887
No 272
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=35.67 E-value=1.5e+02 Score=29.53 Aligned_cols=130 Identities=13% Similarity=0.086 Sum_probs=65.6
Q ss_pred eEEEEECCCCCeEE-ccccCCCcccceeecCCCc-EEEecCCC------CCCCeEEEecCCCCCCCCceEeccCccccC-
Q 044265 70 HSAILDLQTNQIRP-LMILTDTWCSSGQILADGT-VLQTGGDL------DGYKKIRKFSPCEANGLCDWVELDDVELVN- 140 (517)
Q Consensus 70 ~~~~yDp~t~~w~~-l~~~~~~~c~~~~~l~dG~-l~v~GG~~------~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~- 140 (517)
.+.++|+.|++... ++....+ +.++.+||+ +|+..-+. +....+.+||+. +.+-... -++..
T Consensus 60 ~V~ViD~~t~~v~~~I~vG~~P---~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~----t~~v~~~--I~v~~g 130 (386)
T 3sjl_D 60 QQFVIDGEAGRVIGMIDGGFLP---NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV----TLLPTAD--IELPDA 130 (386)
T ss_dssp EEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEE--EEETTC
T ss_pred EEEEEECCCCeEEEEEECCCCC---cEEECCCCCEEEEEcccccccccCCCCCEEEEEECC----CCeEEEE--EECCCc
Confidence 58899999888653 3332222 366778887 66664210 013579999998 5553321 11221
Q ss_pred -----cCccceeEEcCCCcEEEEcCC-CCCceEEe-CCCCCce-eccchhhccccccCCCCceEEEccCCcEEEEEC
Q 044265 141 -----GRWYGTDQILPDGSVIILGGK-GANTVEYY-PPRNGAV-SFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN 209 (517)
Q Consensus 141 -----~R~~~s~~~L~dG~v~vvGG~-~~~~~E~y-P~~~~w~-~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg 209 (517)
...-...++-+||+.+.+... ...++.++ ..+.+-. ..+. ..-....+.....+..+++||++.++.-
T Consensus 131 ~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v-~g~~~~~P~g~~~~~~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV-PDCYHIFPTAPDTFFMHCRDGSLAKVAF 206 (386)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-CSEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred cccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC-CCcceeecCCCceeEEECCCCCEEEEEC
Confidence 123345677789975444432 23456566 4443221 1111 0000000111122456678888887654
No 273
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=34.71 E-value=4.4e+02 Score=28.33 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=24.8
Q ss_pred EeCCCCCCceeccCCCCCcc--ccccceeeecCCCcEEEec
Q 044265 340 YRPTQPAGLRFMTLNPGTIP--RMYHSTANLLPDGRVLIAG 378 (517)
Q Consensus 340 YdP~t~~g~~W~~~~~~~~~--R~yhs~a~ll~dG~V~v~G 378 (517)
++-..+.|.+|+.......+ ..+.+..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 35556778899875444332 1334556667999987764
No 274
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=34.22 E-value=4.4e+02 Score=27.76 Aligned_cols=84 Identities=12% Similarity=0.074 Sum_probs=48.9
Q ss_pred EEEECCCCCeEEcccc------CCCcccceeecCCCcEEEecCCCCC--CCeEEEecCCCCCCCCceEeccCccccCcCc
Q 044265 72 AILDLQTNQIRPLMIL------TDTWCSSGQILADGTVLQTGGDLDG--YKKIRKFSPCEANGLCDWVELDDVELVNGRW 143 (517)
Q Consensus 72 ~~yDp~t~~w~~l~~~------~~~~c~~~~~l~dG~l~v~GG~~~g--~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~ 143 (517)
...+...++++.+... +.....+..+.+||+.+++.-...| ...++++|.. +.+.... ..+...+
T Consensus 97 ~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~----tg~~~~~--~~~~~~~- 169 (695)
T 2bkl_A 97 YWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD----SGEWSKV--DVIEGGK- 169 (695)
T ss_dssp EEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT----TCCBCSS--CCBSCCT-
T ss_pred EEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC----CCCCcCC--cccCccc-
Confidence 3445556667665431 2212345567899998886533222 2689999998 5555411 1222222
Q ss_pred cceeEEcCCCcEEEEcCCC
Q 044265 144 YGTDQILPDGSVIILGGKG 162 (517)
Q Consensus 144 ~~s~~~L~dG~v~vvGG~~ 162 (517)
..+.+..+||+.++.+..+
T Consensus 170 ~~~~~wspDg~~l~~~~~d 188 (695)
T 2bkl_A 170 YATPKWTPDSKGFYYEWLP 188 (695)
T ss_dssp TCCCEECTTSSEEEEEECC
T ss_pred ccceEEecCCCEEEEEEec
Confidence 2456778899987776553
No 275
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=33.85 E-value=3.3e+02 Score=28.89 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=49.9
Q ss_pred ccEEEEEcCCcCCcccccCCCCCCCCceeEEEecCCCCCceec-CCCcc--------eeeeeeEEecCCcEEEEcCccCC
Q 044265 253 TAVIVVCGGAQFGAFIQRSTDTPAHGSCGRIIATSADPTWEME-DMPFG--------RIMGDMVMLPTGDVLIINGAQAG 323 (517)
Q Consensus 253 ~gkI~v~GG~~~~~~~~~~~~~~a~~s~~~id~~~~~~~W~~~-~m~~~--------R~~~~~v~lpdG~v~v~GG~~~g 323 (517)
+++||++.... .+..+|..+....|+.. ..+.. -...+ +++-+++||+... + +
T Consensus 66 ~g~vyv~~~~~---------------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~-d-g 127 (668)
T 1kv9_A 66 DGVIYTSMSWS---------------RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRG-VALWGDKVYVGTL-D-G 127 (668)
T ss_dssp TTEEEEEEGGG---------------EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCC-CEEEBTEEEEECT-T-S
T ss_pred CCEEEEECCCC---------------eEEEEECCCChhceEECCCCCccccccccccCCccc-eEEECCEEEEEcC-C-C
Confidence 89999876421 23456665445568764 22211 01112 3445888887532 2 1
Q ss_pred CCCcccCCCCccccEEEeCCCCCCceeccCCCCCccccccceeeecCCCcEEEecCC
Q 044265 324 TQGFEMASNPCLFPVLYRPTQPAGLRFMTLNPGTIPRMYHSTANLLPDGRVLIAGSN 380 (517)
Q Consensus 324 ~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~ll~dG~V~v~GG~ 380 (517)
.+..+|.++. ...|+.-..-.........+-++.+|+|||..+.
T Consensus 128 ------------~l~alD~~tG-~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~ 171 (668)
T 1kv9_A 128 ------------RLIALDAKTG-KAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG 171 (668)
T ss_dssp ------------EEEEEETTTC-CEEEEEECSCTTSSCBCCSCCEEETTEEEECCBC
T ss_pred ------------EEEEEECCCC-CEeeeeccCCCCCcceecCCCEEECCEEEEeCCC
Confidence 3578898876 2368753321111122222333458888886543
No 276
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=33.50 E-value=3.3e+02 Score=26.12 Aligned_cols=117 Identities=11% Similarity=-0.005 Sum_probs=61.4
Q ss_pred CCceEEcccCcccceeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccC
Q 044265 9 PGTWELVLADAGISSMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILT 88 (517)
Q Consensus 9 ~g~W~~~~~~~~~~~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~ 88 (517)
.-+++.++. -.-.+.++++.++|++|+.... | .+..++ +++.+.+...+
T Consensus 20 ~~~~~~va~-~l~~P~~ia~~pdG~l~V~e~~-----------g-----------------~I~~i~--~g~~~~~~~~~ 68 (352)
T 2ism_A 20 GLRVEEVVG-GLEVPWALAFLPDGGMLIAERP-----------G-----------------RIRLFR--EGRLSTYAELS 68 (352)
T ss_dssp CCCEEEEEC-CCSCEEEEEECTTSCEEEEETT-----------T-----------------EEEEEE--TTEEEEEEECC
T ss_pred CcEEEEEEC-CCCCceEEEEcCCCeEEEEeCC-----------C-----------------eEEEEE--CCCccEeecce
Confidence 346677764 2335678888899999987642 2 133444 23333222111
Q ss_pred -----CCcccceeecCC----CcEEEecCCCC--CCCeEEEecCCCCCCCCceE---eccCccccC----cCccceeEEc
Q 044265 89 -----DTWCSSGQILAD----GTVLQTGGDLD--GYKKIRKFSPCEANGLCDWV---ELDDVELVN----GRWYGTDQIL 150 (517)
Q Consensus 89 -----~~~c~~~~~l~d----G~l~v~GG~~~--g~~~v~~ydp~~~~~t~~W~---~~~~~~m~~----~R~~~s~~~L 150 (517)
.....+.++.+| +.|||.--... ....+..|+.. ..++. .+ -..++. .......++-
T Consensus 69 v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~----~~~~~~~~~l-~~~~p~~~~~~h~~~~l~~~ 143 (352)
T 2ism_A 69 VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL----GERGVLDRVV-LDGIPARPHGLHSGGRIAFG 143 (352)
T ss_dssp CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC----SSCEEEEEEE-EEEECCCTTCCCCCCCEEEC
T ss_pred EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC----CCCcCceEEE-EEeCCCCCCCCcCCceEEEC
Confidence 122334445555 78988743210 01567788876 23222 11 011221 1223467777
Q ss_pred CCCcEEEEcCC
Q 044265 151 PDGSVIILGGK 161 (517)
Q Consensus 151 ~dG~v~vvGG~ 161 (517)
+||++|+.-|.
T Consensus 144 pdG~Lyv~~G~ 154 (352)
T 2ism_A 144 PDGMLYVTTGE 154 (352)
T ss_dssp TTSCEEEECCC
T ss_pred CCCCEEEEECC
Confidence 89999998664
No 277
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=28.17 E-value=1.1e+02 Score=29.69 Aligned_cols=54 Identities=2% Similarity=-0.190 Sum_probs=25.9
Q ss_pred eEEEEECCCCC--eEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEe
Q 044265 70 HSAILDLQTNQ--IRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVE 132 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~ 132 (517)
.+..||.++++ |+.-. .... +..++.+|++|++++.+ ..+..||..++ ...|.-
T Consensus 20 ~v~a~d~~tG~~~W~~~~--~~~~--s~p~~~~g~~~v~~s~d---g~l~a~d~~tG--~~~w~~ 75 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE--DPVL--QVPTHVEEPAFLPDPND---GSLYTLGSKNN--EGLTKL 75 (369)
T ss_dssp EEEEEETTTCCEEEEEEC--CCSC--CCC-----CCEEECTTT---CCEEEC-------CCSEEC
T ss_pred EEEEEECCCCCEEEEecC--CCce--ecceEcCCCEEEEeCCC---CEEEEEECCCC--ceeeee
Confidence 36678888876 54322 1122 23345688888887543 46889998743 455653
No 278
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=27.92 E-value=2.5e+02 Score=29.23 Aligned_cols=125 Identities=11% Similarity=0.019 Sum_probs=63.1
Q ss_pred CCCeEEccccCCCcccc-eeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccC-ccccCcCccceeEEc-----
Q 044265 78 TNQIRPLMILTDTWCSS-GQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDD-VELVNGRWYGTDQIL----- 150 (517)
Q Consensus 78 t~~w~~l~~~~~~~c~~-~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~-~~m~~~R~~~s~~~L----- 150 (517)
-.+|+.........|.. .+.+.||+|++..-.........++--.+ ...+|.+... ..|+.+.+..++..+
T Consensus 199 G~TW~~~~~~~~~~~~~~v~~~~dG~l~~~~r~~~~~~~~~~~~S~D--gG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~ 276 (601)
T 1w8o_A 199 GRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKVAVSTD--GGHSYGPVTIDRDLPDPTNNASIIRAFPDAP 276 (601)
T ss_dssp TSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEEEEESS--TTSCCCCCEEEEEEECSSCCCEEEESSTTCC
T ss_pred CcCccCCCCCCCCCCcCEEEEeCCCEEEEEEeCCCCCCCEEEEEEcC--CCCCCCCCeecCcCCCCCccceEEEeccccc
Confidence 35688765443333333 33467999988653321112233333221 2578987511 235555554454443
Q ss_pred ---CCCcEEEEcCCCC----CceEEe-C--CCCCceeccchhhccccccCCCCceEEEccCCcEEEEEC
Q 044265 151 ---PDGSVIILGGKGA----NTVEYY-P--PRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFAN 209 (517)
Q Consensus 151 ---~dG~v~vvGG~~~----~~~E~y-P--~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~Gg 209 (517)
+++.+++++.... ....++ . ...+|.....+.. ....|+.+..+.||+|+++.-
T Consensus 277 ~~~~~~~~l~~~~~~~~~~R~~~~l~~S~D~G~tW~~~~~l~~-----~~~~Y~~l~~~~dg~i~~~ye 340 (601)
T 1w8o_A 277 AGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQP-----GSMSYSTLTALPDGTYGLLYE 340 (601)
T ss_dssp TTCSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEE-----EECCCEEEEECTTSCEEEEEC
T ss_pred CCCCCCCEEEEECCCCCCcccceEEEEeCCCCCCCCCceEeCC-----CCCCCCeEEEcCCCeEEEEEe
Confidence 2445556654221 123344 2 2356764322221 123588888889999998643
No 279
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=27.91 E-value=1.6e+02 Score=31.21 Aligned_cols=82 Identities=13% Similarity=-0.080 Sum_probs=49.8
Q ss_pred ceEEEEECCCCCe---EEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCcccc------
Q 044265 69 AHSAILDLQTNQI---RPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELV------ 139 (517)
Q Consensus 69 ~~~~~yDp~t~~w---~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~------ 139 (517)
....+||..+++. .++. ......+..+||+.++++.. +.++++|.. +.+-..+....-.
T Consensus 90 ~~i~~~d~~~g~~~~~~~l~----~~~~~~~~SPDG~~la~~~~----~~i~~~~~~----~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNELP----RPIQYLCWSPVGSKLAYVYQ----NNIYLKQRP----GDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp EEEEEEETTTTEECCSSCCC----SSBCCEEECSSTTCEEEEET----TEEEEESST----TSCCEECCCCCBTTTEEES
T ss_pred eEEEEEECCCCccccceecC----cccccceECCCCCEEEEEEC----CeEEEEeCC----CCCcEEEecCCCcCCeEcc
Confidence 3678999999877 4442 22345677899998887742 589999887 3333332000000
Q ss_pred CcCc---------cceeEEcCCCcEEEEcCCC
Q 044265 140 NGRW---------YGTDQILPDGSVIILGGKG 162 (517)
Q Consensus 140 ~~R~---------~~s~~~L~dG~v~vvGG~~ 162 (517)
.+.| ..+.+..+||+.++.+..+
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 0111 1367788999988887644
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=27.86 E-value=5.4e+02 Score=27.46 Aligned_cols=141 Identities=12% Similarity=0.015 Sum_probs=68.4
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+.++|+.....+.+.......-.+.++.+ +|+||++--. ....|+++++.. ..-..+....+..+ .+++
T Consensus 476 ~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~--~~~~I~~~~~dG----~~~~~l~~~~l~~P---nGla 546 (699)
T 1n7d_A 476 TVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLNG----VDIYSLVTENIQWP---NGIT 546 (699)
T ss_dssp CEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS--SSCCEEBCCSSS----CCCCEESCSSCSSC---CCEE
T ss_pred eEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC--CCCeEEEEeCCC----CCeeEEEeCCCCCc---cEEE
Confidence 466777766554443221111112333333 5788887421 125788888762 21111101123322 3445
Q ss_pred EcC-CCcEEEEcCCCCCceEEe-CCCCCceeccchhhccccccCCCCceEEEccCCcEEEEE--CCceEEEeCCCCeEEE
Q 044265 149 ILP-DGSVIILGGKGANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYVHLLPNGHLFIFA--NDKAVMYDYETNKIAR 224 (517)
Q Consensus 149 ~L~-dG~v~vvGG~~~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~~~~~~G~iyv~G--g~~~~~ydp~t~~w~~ 224 (517)
+-+ +++||++=.. ...++++ +....-... +... ....+|....+-.++||+.- +..+.++|+.+++-..
T Consensus 547 vd~~~~~LY~aD~~-~~~I~~~d~dG~~~~~~--~~~~----~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 547 LDLLSGRLYWVDSK-LHSISSIDVNGGNRKTI--LEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp ECTTTCCEEEEETT-TTEEEEECSSSSCCEEE--CCCS----SSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred EeccCCEEEEEecC-CCeEEEEccCCCceEEE--EecC----CcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 543 5789987543 3457777 432211111 0000 00123444444466888874 3578899998877654
Q ss_pred ec
Q 044265 225 EY 226 (517)
Q Consensus 225 ~~ 226 (517)
.+
T Consensus 620 ~i 621 (699)
T 1n7d_A 620 LL 621 (699)
T ss_dssp CC
T ss_pred Ee
Confidence 43
No 281
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=27.37 E-value=2e+02 Score=28.97 Aligned_cols=96 Identities=16% Similarity=0.061 Sum_probs=53.3
Q ss_pred ceEEEEECCCCCeEE-ccccCCCcccceeecCCCc-EEEecCC------CCCCCeEEEecCCCCCCCCceEeccCcccc-
Q 044265 69 AHSAILDLQTNQIRP-LMILTDTWCSSGQILADGT-VLQTGGD------LDGYKKIRKFSPCEANGLCDWVELDDVELV- 139 (517)
Q Consensus 69 ~~~~~yDp~t~~w~~-l~~~~~~~c~~~~~l~dG~-l~v~GG~------~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~- 139 (517)
..+.++|+.|++... ++....+ +.++.+||+ +||.--. .+....+.++|+. +.+-... -++.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P---gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~----t~~vv~~--I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP---HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV----TFLPIAD--IELPD 169 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEE--EEETT
T ss_pred CeEEEEECCCCEEEEEEECCCCC---ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC----CCcEEEE--EECCC
Confidence 368899999988653 3333222 566778886 5555210 0113579999998 5543321 1222
Q ss_pred CcC-----ccceeEEcCCCcEEEEcCCC-CCceEEe-CCCC
Q 044265 140 NGR-----WYGTDQILPDGSVIILGGKG-ANTVEYY-PPRN 173 (517)
Q Consensus 140 ~~R-----~~~s~~~L~dG~v~vvGG~~-~~~~E~y-P~~~ 173 (517)
.+| .-+..++-+||+.+.+.-.. ..++.++ ..+.
T Consensus 170 ~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred ccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 112 22456777888755554332 3456666 5543
No 282
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=27.19 E-value=85 Score=31.45 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=33.0
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCC
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPC 122 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~ 122 (517)
.+.+||..+++-......+.....+.+..++|+.+++|+.+ ..+.+||+.
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d---g~v~iwd~~ 222 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN---GTVVQYLPT 222 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT---SCEEEECTT
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC---CcEEEEccC
Confidence 47789988764322112233333445667899999999864 579999986
No 283
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=27.16 E-value=3e+02 Score=28.90 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=69.7
Q ss_pred eEEEEE----CCCCCeEEcc----ccCCCccc-----ceeecCCCcEEEe-cCCCCCCCeEEEecCCCCCCCCceEeccC
Q 044265 70 HSAILD----LQTNQIRPLM----ILTDTWCS-----SGQILADGTVLQT-GGDLDGYKKIRKFSPCEANGLCDWVELDD 135 (517)
Q Consensus 70 ~~~~yD----p~t~~w~~l~----~~~~~~c~-----~~~~l~dG~l~v~-GG~~~g~~~v~~ydp~~~~~t~~W~~~~~ 135 (517)
...++| +.+++++.+. ..+..+.. ...+.+||+.+++ ....++...+.++|.. +.+...+
T Consensus 279 ~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~----~~~~~~l-- 352 (719)
T 1z68_A 279 VLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDT----VENAIQI-- 352 (719)
T ss_dssp EEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSC----STTCEEC--
T ss_pred EEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECC----CCceEec--
Confidence 567889 8887776655 24444444 5567889984333 3333456788999987 4454444
Q ss_pred ccccCcCcc-ceeEEcCCCcEEEEcCC--C-CCceEEe--CC-CCC--ceeccc-hhhccccccCCCCceEEEccCCcEE
Q 044265 136 VELVNGRWY-GTDQILPDGSVIILGGK--G-ANTVEYY--PP-RNG--AVSFPF-LADVEDKQMDNLYPYVHLLPNGHLF 205 (517)
Q Consensus 136 ~~m~~~R~~-~s~~~L~dG~v~vvGG~--~-~~~~E~y--P~-~~~--w~~~~~-l~~t~~~~~~~~yp~~~~~~~G~iy 205 (517)
....|. .......+++||..+.. . .....+| +. ... ...+.. +... ...+......+||+.+
T Consensus 353 ---t~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~s~dg~~l 424 (719)
T 1z68_A 353 ---TSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKE-----RCQYYTASFSDYAKYY 424 (719)
T ss_dssp ---SCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTT-----TBCBEEEEECGGGSSE
T ss_pred ---ccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCC-----CCceEEEEECCCCCEE
Confidence 222222 12222334455555432 1 2345666 32 121 121110 1000 0122234556788755
Q ss_pred EEEC-----CceEEEeCCCCeE
Q 044265 206 IFAN-----DKAVMYDYETNKI 222 (517)
Q Consensus 206 v~Gg-----~~~~~ydp~t~~w 222 (517)
++.. ....+||.++++.
T Consensus 425 ~~~~s~~~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 425 ALVCYGPGIPISTLHDGRTDQE 446 (719)
T ss_dssp EEEECCBSSCEEEEECSSSCCE
T ss_pred EEEcCCCCCCeEEEEECCCCCE
Confidence 5432 2457888877754
No 284
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=26.36 E-value=1.3e+02 Score=28.11 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=47.9
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecCCCcEEEecCCCC--CCCeEEEecCCCCCCCCceEeccCccccCcCcccee
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQTGGDLD--GYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTD 147 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~--g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~ 147 (517)
...++|..+++.+.+ .........+||+.+++..... +...+.++|.. +.+...+ .... . ....
T Consensus 44 ~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~----~g~~~~l--~~~~--~-~~~~ 109 (347)
T 2gop_A 44 TIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLE----TLSSKKI--LEAK--N-IRSL 109 (347)
T ss_dssp EEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT----TTEEEEE--EEES--E-EEEE
T ss_pred eEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECC----CCceEEE--EcCC--C-ccce
Confidence 577889999887776 1223346678998777765432 33457788877 4554444 2222 1 3445
Q ss_pred EEcCCCcEEEEcCC
Q 044265 148 QILPDGSVIILGGK 161 (517)
Q Consensus 148 ~~L~dG~v~vvGG~ 161 (517)
+..+||+.+++...
T Consensus 110 ~wspdg~~l~~~~~ 123 (347)
T 2gop_A 110 EWNEDSRKLLIVGF 123 (347)
T ss_dssp EECTTSSEEEEEEE
T ss_pred eECCCCCEEEEEEc
Confidence 56679987776653
No 285
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=26.26 E-value=1.1e+02 Score=29.28 Aligned_cols=61 Identities=15% Similarity=0.083 Sum_probs=37.0
Q ss_pred ccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEcCC
Q 044265 92 CSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILGGK 161 (517)
Q Consensus 92 c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvGG~ 161 (517)
..+.++..+|+||++.-. ...|.+||+. +.++..+ ...+.-.+-.++++-++|++||+...
T Consensus 250 pdgia~d~~G~l~va~~~---~~~V~~~d~~----~G~~~~~--~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 250 CDGISIDKDHNIYVGDLA---HSAIGVITSA----DRAYKLL--VTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp CSCEEECTTCCEEEEEGG---GTEEEEEETT----TTEEEEE--EECGGGSCEEEEEECTTSCEEEEECC
T ss_pred CceEEECCCCCEEEEccC---CCeEEEEECC----CCCEEEE--EECCceecCCeeEECCCCcEEEEeCc
Confidence 344556678999988532 3689999995 3445444 22222223334444478999998654
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=26.25 E-value=3.5e+02 Score=28.21 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=33.8
Q ss_pred EEEEECCCCC--eEEccccC---CCccc---ceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEec
Q 044265 71 SAILDLQTNQ--IRPLMILT---DTWCS---SGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVEL 133 (517)
Q Consensus 71 ~~~yDp~t~~--w~~l~~~~---~~~c~---~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~ 133 (517)
+..+|.+|++ |+.-.... ...|. .+..+.+++||+.... ..+..+|..++ ...|...
T Consensus 80 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d----g~l~AlD~~TG--~~~W~~~ 144 (582)
T 1flg_A 80 LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD----ASVVALNKNTG--KVVWKKK 144 (582)
T ss_dssp EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT----TEEEEEESSSC--CEEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC----CEEEEEECCCC--CEEeeec
Confidence 5678888776 66432211 12342 3344567888775321 46888999854 5679753
No 287
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=26.12 E-value=1.8e+02 Score=31.15 Aligned_cols=78 Identities=12% Similarity=0.129 Sum_probs=43.0
Q ss_pred ceEEEEECCCCC--eEEccccCCCcccceeecCCCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccce
Q 044265 69 AHSAILDLQTNQ--IRPLMILTDTWCSSGQILADGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGT 146 (517)
Q Consensus 69 ~~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s 146 (517)
.....+|+.|++ |+.-. ...... +++...|.++++|.. ...++.||..++ ..-|+.. +...-...-
T Consensus 455 g~l~A~D~~tG~~~W~~~~--~~~~~~-g~~~tagglvf~gt~---dg~l~a~D~~tG--~~lw~~~----~~~~~~~~p 522 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPY--VTIFNG-GTLSTAGNLVFEGSA---DGRVIAYAADTG--EKLWEQP----AASGVMAAP 522 (689)
T ss_dssp EEEEEEETTTTEEEEEEEE--SSSCCC-CEEEETTTEEEEECT---TSEEEEEETTTC--CEEEEEE----CSSCCCSCC
T ss_pred eeEEEEECCCCCeEeEccC--CCCccC-ccceECCCEEEEECC---CCcEEEEECCCC--ccceeee----CCCCcccCc
Confidence 457789999987 55321 222222 344444555555533 267999999853 4457643 332222112
Q ss_pred eEEcCCCcEEEE
Q 044265 147 DQILPDGSVIIL 158 (517)
Q Consensus 147 ~~~L~dG~v~vv 158 (517)
++...||+.||+
T Consensus 523 ~ty~~~G~qyv~ 534 (689)
T 1yiq_A 523 VTYSVDGEQYVT 534 (689)
T ss_dssp EEEEETTEEEEE
T ss_pred eEEEECCEEEEE
Confidence 222249999987
No 288
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=24.96 E-value=5.9e+02 Score=26.27 Aligned_cols=123 Identities=18% Similarity=0.168 Sum_probs=62.5
Q ss_pred CCCceEEcccCcccceeE--EEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEcc
Q 044265 8 LPGTWELVLADAGISSMH--TAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLM 85 (517)
Q Consensus 8 ~~g~W~~~~~~~~~~~~h--~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~ 85 (517)
..-+|+...... ....+ .+-+.+|++++.-....+ |. + .+..-.-.-.+|+...
T Consensus 361 ~G~TW~~~~~~~-~~~~e~~vve~~dG~L~~~~R~~~~--------g~-r--------------~v~~S~D~G~TWt~~~ 416 (523)
T 4fj6_A 361 RGKTWHLHNLAR-TNTTEAQVAEVEPGVLMLNMRDNRG--------GS-R--------------AVATTKDLGKTWTEHP 416 (523)
T ss_dssp TTSSCEECCCSE-ETEEEEEEEEEETTEEEEEEEETTC--------SB-C--------------EEEEESSTTSSCEECT
T ss_pred CCCeEEECCCCC-ccccCCEEEEecCCEEEEEEEecCC--------Cc-E--------------EEEEECCCCCccCcCc
Confidence 345798764322 12333 334579999997554311 21 0 0111111246788753
Q ss_pred ----ccCCCcccceeecC-------CCcEEEecCCCC--CCCeEEEecCCCCCCCCceEeccCccc--cCc--CccceeE
Q 044265 86 ----ILTDTWCSSGQILA-------DGTVLQTGGDLD--GYKKIRKFSPCEANGLCDWVELDDVEL--VNG--RWYGTDQ 148 (517)
Q Consensus 86 ----~~~~~~c~~~~~l~-------dG~l~v~GG~~~--g~~~v~~ydp~~~~~t~~W~~~~~~~m--~~~--R~~~s~~ 148 (517)
..+++.|.+.++-. ++.++++..-.+ +.....+|=-.+ ...+|... ..+ ..+ -.|++++
T Consensus 417 ~~~~~L~~P~c~~Sii~~~~~~~~~g~~~lL~snp~~~~~R~~l~v~~S~D--~G~TW~~~--~~v~~~~~~~~~Ys~l~ 492 (523)
T 4fj6_A 417 SSRSALQESVCMASLIKVNAKDNITGKDLLLFSNPNTTKGRNHITIKASLD--GGLTWPTE--HQVLLDEAEGWGYSCLS 492 (523)
T ss_dssp TTTTSSBCSSCCCEEEEECGGGSTTCSCEEEEEEECCSSSSCCEEEEEESS--TTSCCCGG--GEEEEECSCCCCCEEEE
T ss_pred CccccCCCCCcccEEEEEecccCCCCCcEEEEEccCCCCccccceEEEeCC--CCCCCccC--ceEEEcCCCCcccceEE
Confidence 34556687665422 124555543221 223333332221 15789764 222 122 3699999
Q ss_pred EcCCCcEEEE
Q 044265 149 ILPDGSVIIL 158 (517)
Q Consensus 149 ~L~dG~v~vv 158 (517)
.++||+|.++
T Consensus 493 ~~~dG~i~il 502 (523)
T 4fj6_A 493 MIDKETVGIF 502 (523)
T ss_dssp ECSSSEEEEE
T ss_pred EcCCCEEEEE
Confidence 9999999876
No 289
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=24.20 E-value=2.8e+02 Score=28.01 Aligned_cols=116 Identities=15% Similarity=0.027 Sum_probs=0.0
Q ss_pred EEEEee-CCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcE
Q 044265 25 HTAVTR-FNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTV 103 (517)
Q Consensus 25 h~~ll~-~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l 103 (517)
|++++- +|+||.||....|.-.+.-....... ......+-.+....+..+...... ..++..+|+|
T Consensus 268 hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~----------~~~P~~v~~~~~~~i~~ia~G~~h---s~~lt~~G~v 334 (473)
T 3of7_A 268 HCFALTKDNKLVSWGLNQFGQCGVSEDVEDGAL----------VTKPKRLALPDNVVIRSIAAGEHH---SLILSQDGDL 334 (473)
T ss_dssp EEEEEETTSCEEEEEECTTSTTCCCSCCCTTCE----------EEEEEECCCCTTCCEEEEEECSSE---EEEEETTSCE
T ss_pred eEEEEecCCCEEEeCCCCCCCcCCCCcccCCce----------eeccccccccCCccEEEEEeCCCe---EEEEeCCCeE
Q ss_pred EEecCCCCC------------------CCeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEc
Q 044265 104 LQTGGDLDG------------------YKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILG 159 (517)
Q Consensus 104 ~v~GG~~~g------------------~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvG 159 (517)
|..|-...+ .......-|.. -...... ..+.... +|++++..+|+||..|
T Consensus 335 ~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~---v~~~~~v--~~Ia~G~-~hs~al~~~G~vy~wG 402 (473)
T 3of7_A 335 YSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTK---LNNVPKF--KSVAAGS-HHSVAVAQNGIAYSWG 402 (473)
T ss_dssp EEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEE---CCSSCCE--EEEEECS-SEEEEEETTSCEEEEE
T ss_pred EEEECCCCCccCCCccccccccccccCCceeeeccCcc---cCCCCce--EEEEeCC-CeEEEEeCCCcEEEee
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=24.02 E-value=6.4e+02 Score=26.39 Aligned_cols=57 Identities=18% Similarity=0.225 Sum_probs=33.2
Q ss_pred EEEEEC-CCCC--eEEccccC-----CCccc---ceeec--CCCc----EEEecCCCCCCCeEEEecCCCCCCCCceEec
Q 044265 71 SAILDL-QTNQ--IRPLMILT-----DTWCS---SGQIL--ADGT----VLQTGGDLDGYKKIRKFSPCEANGLCDWVEL 133 (517)
Q Consensus 71 ~~~yDp-~t~~--w~~l~~~~-----~~~c~---~~~~l--~dG~----l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~ 133 (517)
+..+|. +|++ |+.-.... ..+|. .+..+ .+++ ||+.... ..+..+|..++ ...|...
T Consensus 75 v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d----g~l~AlDa~TG--~~~W~~~ 148 (599)
T 1w6s_A 75 TFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD----GNVAALNAETG--ETVWKVE 148 (599)
T ss_dssp EEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT----SEEEEEETTTC--CEEEEEE
T ss_pred EEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC----CEEEEEECCCC--CEEEeec
Confidence 567888 7776 76533211 12332 23344 5777 8775432 46888998854 5569753
No 291
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=23.86 E-value=3e+02 Score=27.67 Aligned_cols=116 Identities=15% Similarity=0.072 Sum_probs=64.1
Q ss_pred CcEEEecCCCCCC-CeEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCc-EEEEc--------CCCCCceEEe-
Q 044265 101 GTVLQTGGDLDGY-KKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGS-VIILG--------GKGANTVEYY- 169 (517)
Q Consensus 101 G~l~v~GG~~~g~-~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~-v~vvG--------G~~~~~~E~y- 169 (517)
.++||.-...... ..+.++|+. +.+-. ..++..+.- .++.-+||+ +||.- |.....+.++
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~----t~~vv----~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGS----TGRIL----GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETT----TTEEE----EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEECCCcCCCCCeEEEEECC----CCEEE----EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 3578875432111 689999998 44433 345556654 788888887 55542 1122457777
Q ss_pred CCCCCce-eccchhhccccccCCCCc-eEEEccCCc-EEEEE---CCceEEEeCCCCeEEEecC
Q 044265 170 PPRNGAV-SFPFLADVEDKQMDNLYP-YVHLLPNGH-LFIFA---NDKAVMYDYETNKIAREYP 227 (517)
Q Consensus 170 P~~~~w~-~~~~l~~t~~~~~~~~yp-~~~~~~~G~-iyv~G---g~~~~~ydp~t~~w~~~~p 227 (517)
+.+.+-. ..+.-...+.. ...+| .+.+.+||+ +|+.. .+++.++|.++++....++
T Consensus 156 ~~t~~vv~~I~v~g~~r~~--~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFL--VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp TTTCCEEEEEEETTCCCCC--BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CCCCcEEEEEECCCccccc--cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 6655433 12110000000 00112 245668886 66543 2468999999998876554
No 292
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=23.64 E-value=3e+02 Score=29.20 Aligned_cols=106 Identities=11% Similarity=0.051 Sum_probs=56.8
Q ss_pred EEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEccccCCCcccceeecCCCcEEEe
Q 044265 27 AVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLMILTDTWCSSGQILADGTVLQT 106 (517)
Q Consensus 27 ~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v~ 106 (517)
.+-+|||.+++.-... |. -.....++|..|++..+.... .....+.+.. ||+-++.
T Consensus 135 ~~SpDg~~lAy~~~~~---------G~-------------~~~~i~v~dl~tg~~~~~~~~-~~k~~~~~Ws-Dg~~l~y 190 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLA---------GS-------------DWREIHLMDVESKQPLETPLK-DVKFSGISWL-GNEGFFY 190 (693)
T ss_dssp EECTTSSEEEEEEECS---------SC-------------CEEEEEEEETTTCSEEEEEEE-EEESCCCEEE-TTTEEEE
T ss_pred EECCCCCEEEEEEecC---------CC-------------ceEEEEEEECCCCCCCccccC-CceeccEEEe-CCCEEEE
Confidence 4567999887764332 21 013578999999998765321 1111234556 8876555
Q ss_pred cCCCC----------CCCeEEEecCCCCCCCCceEeccCcccc--CcCccceeEEcCCCcEEEEcC
Q 044265 107 GGDLD----------GYKKIRKFSPCEANGLCDWVELDDVELV--NGRWYGTDQILPDGSVIILGG 160 (517)
Q Consensus 107 GG~~~----------g~~~v~~ydp~~~~~t~~W~~~~~~~m~--~~R~~~s~~~L~dG~v~vvGG 160 (517)
.-..+ ....+++++..+. ..+=..+ -... .+.++.++..-+||+.+++.-
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~--~~~~~~v--~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 191 SSYDKPDGSELSARTDQHKVYFHRLGTA--QEDDRLV--FGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp EESSCCC-------CCCCEEEEEETTSC--GGGCEEE--ESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred EEecCcccccccccCCCcEEEEEECCCC--cccceEE--EecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 54331 1245777776521 1100111 0111 244566677788999766643
No 293
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=22.21 E-value=7.1e+02 Score=26.29 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=34.9
Q ss_pred eEEEEECCCCC--eEEccc-cCC--CcccceeecCCCcEEEecCCCC--CCCeEEEecCCCCCCCCceEec
Q 044265 70 HSAILDLQTNQ--IRPLMI-LTD--TWCSSGQILADGTVLQTGGDLD--GYKKIRKFSPCEANGLCDWVEL 133 (517)
Q Consensus 70 ~~~~yDp~t~~--w~~l~~-~~~--~~c~~~~~l~dG~l~v~GG~~~--g~~~v~~ydp~~~~~t~~W~~~ 133 (517)
....+|.+|++ |+.-.. ... ....+..++.+++||+..+..+ ....+..||..++ +..|+..
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG--~~~W~~~ 207 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETG--ERKWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTC--CEEEEEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCC--cEEEEec
Confidence 47788998887 654221 111 1122233455777777554221 1357899999854 5568653
No 294
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=21.71 E-value=3.6e+02 Score=25.67 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=53.8
Q ss_pred EEeeCCEEEEEeccCCCC-CCcccCCCcccccccccccccCCcceEEEEEC-CCCCeEEcccc----CCCcccceeecCC
Q 044265 27 AVTRFNTVVLLDRTNIGP-SRKMLGRGRCRLDRNDRALKRDCYAHSAILDL-QTNQIRPLMIL----TDTWCSSGQILAD 100 (517)
Q Consensus 27 ~ll~~gkv~~~gg~~~g~-~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp-~t~~w~~l~~~----~~~~c~~~~~l~d 100 (517)
....+||.++.|+.+... | ..+++.+|.- ..++|++++.+ .|+| ..-.+
T Consensus 36 PF~~~Gk~~I~GRVE~Rd~s---------------------e~S~V~fFeet~~d~w~~v~~~~~~LqDPF----~t~I~ 90 (315)
T 2b4w_A 36 PFSYKGKTHIYGRVEKRDIW---------------------AASHVRLFEETGKDEFTAVPELSWELEDPY----IAKIN 90 (315)
T ss_dssp CEEETTEEEEEEEEECTTCS---------------------SCCEEEEEEEEETTEEEECTTCCBSCEEEE----EEEET
T ss_pred ceeECCEEEEEeeeecCCCc---------------------cccEEEEEEEcCCCceEECCCCEEEecCcc----EEEEC
Confidence 345699999999987321 0 1246778865 78999988762 2333 22345
Q ss_pred CcEEEecCCC---C--C-CC-eEEEecCCCCCCCCceEeccCccccCcCccceeEEcCCCcEEEEc
Q 044265 101 GTVLQTGGDL---D--G-YK-KIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQILPDGSVIILG 159 (517)
Q Consensus 101 G~l~v~GG~~---~--g-~~-~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~~L~dG~v~vvG 159 (517)
|.+ |+||-. + . +. .+..|--.-. .-..+... |.-|..=| .+-|+||+|-|+-
T Consensus 91 gEl-i~GGveV~~~~~~~l~wrt~FYrG~~~-~L~~F~~G-Pd~MKDIR----lveL~DGrIgVfT 149 (315)
T 2b4w_A 91 NEM-IFGGTRVRKNGNAILSYYGYFYRGTPD-ELTYFTRG-PGCMKDIR----VLQLQDGRLGVFS 149 (315)
T ss_dssp TEE-EEEEEEEC-----CCCEEEEEEEEETT-EEEEEEEC-CTTCCCCE----EEECTTSCEEEEE
T ss_pred CEE-EeeeEEEEeCCCCeeEEEEEEEccChH-HeeeeccC-CcccceeE----EEEecCCeEeeee
Confidence 665 456631 0 0 01 1111211000 01122233 23577666 5788999998874
No 295
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=21.57 E-value=6.8e+02 Score=25.78 Aligned_cols=128 Identities=9% Similarity=0.041 Sum_probs=66.0
Q ss_pred EEEEC-CCCCeEEccccCCCccc--ceeecCCCcEEEecC-CCCCCCeEEEecCCCCCCCCceEecc--CccccCcCccc
Q 044265 72 AILDL-QTNQIRPLMILTDTWCS--SGQILADGTVLQTGG-DLDGYKKIRKFSPCEANGLCDWVELD--DVELVNGRWYG 145 (517)
Q Consensus 72 ~~yDp-~t~~w~~l~~~~~~~c~--~~~~l~dG~l~v~GG-~~~g~~~v~~ydp~~~~~t~~W~~~~--~~~m~~~R~~~ 145 (517)
.+|.- .-.+|+........ |. ..+.+.||+|++.-= ..++.+. +|--.+ ...+|++.. ...|+.+.+..
T Consensus 355 i~~S~D~G~TW~~~~~~~~~-~~e~~vve~~dG~L~~~~R~~~~g~r~--v~~S~D--~G~TWt~~~~~~~~L~~P~c~~ 429 (523)
T 4fj6_A 355 IMYSKDRGKTWHLHNLARTN-TTEAQVAEVEPGVLMLNMRDNRGGSRA--VATTKD--LGKTWTEHPSSRSALQESVCMA 429 (523)
T ss_dssp EEEESSTTSSCEECCCSEET-EEEEEEEEEETTEEEEEEEETTCSBCE--EEEESS--TTSSCEECTTTTTSSBCSSCCC
T ss_pred EEEECCCCCeEEECCCCCcc-ccCCEEEEecCCEEEEEEEecCCCcEE--EEEECC--CCCccCcCcCccccCCCCCccc
Confidence 34543 35789876544322 32 233456899998421 1112222 232221 257899862 13566777766
Q ss_pred eeEEcC------CCcEEEEcCCCC----CceEEe-CC--CCCceecc-chhhccccccCCCCceEEEccCCcEEEE
Q 044265 146 TDQILP------DGSVIILGGKGA----NTVEYY-PP--RNGAVSFP-FLADVEDKQMDNLYPYVHLLPNGHLFIF 207 (517)
Q Consensus 146 s~~~L~------dG~v~vvGG~~~----~~~E~y-P~--~~~w~~~~-~l~~t~~~~~~~~yp~~~~~~~G~iyv~ 207 (517)
++..+. +.+++++..-.. ....+| .. ..+|.... .+... .....|+.+..+.||+|.+.
T Consensus 430 Sii~~~~~~~~~g~~~lL~snp~~~~~R~~l~v~~S~D~G~TW~~~~~v~~~~---~~~~~Ys~l~~~~dG~i~il 502 (523)
T 4fj6_A 430 SLIKVNAKDNITGKDLLLFSNPNTTKGRNHITIKASLDGGLTWPTEHQVLLDE---AEGWGYSCLSMIDKETVGIF 502 (523)
T ss_dssp EEEEECGGGSTTCSCEEEEEEECCSSSSCCEEEEEESSTTSCCCGGGEEEEEC---SCCCCCEEEEECSSSEEEEE
T ss_pred EEEEEecccCCCCCcEEEEEccCCCCccccceEEEeCCCCCCCccCceEEEcC---CCCcccceEEEcCCCEEEEE
Confidence 666653 125666654221 234455 22 35676322 11111 11245888888899998874
No 296
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=21.28 E-value=2.2e+02 Score=28.00 Aligned_cols=122 Identities=11% Similarity=-0.036 Sum_probs=59.0
Q ss_pred CCCceEEcccCcccceeEEEEeeCCEEEEEeccCCCCCCcccCCCcccccccccccccCCcceEEEEECCCCCeEEcc--
Q 044265 8 LPGTWELVLADAGISSMHTAVTRFNTVVLLDRTNIGPSRKMLGRGRCRLDRNDRALKRDCYAHSAILDLQTNQIRPLM-- 85 (517)
Q Consensus 8 ~~g~W~~~~~~~~~~~~h~~ll~~gkv~~~gg~~~g~~~~~~~~G~~~~~~~~~~~~~d~~~~~~~yDp~t~~w~~l~-- 85 (517)
..-+|+.........-.+.+-+.+|+++++-....+ +.. ..++--| .+|+...
T Consensus 214 ~G~tW~~~~~~~~~~e~~vve~~dG~L~~~~r~~~g--------~~r--------------~v~~S~D---~tWt~~~~~ 268 (386)
T 2xzi_A 214 GNRTWSVQRLSGAGAEGTIVQTPDGKLYRNDRPSQK--------GYR--------------MVARGTL---EGFGAFAPD 268 (386)
T ss_dssp TSCEEEEEECTTCCSSEEEEECTTSCEEEEECCSSS--------EEE--------------EEEEEET---TEECCCEEE
T ss_pred CCCcccccCcCCCCCcCEEEEeCCCcEEEEEeCCCC--------ccE--------------EEEEEeC---CccCccccc
Confidence 345899754322222234445578999998765421 111 1223334 6787654
Q ss_pred -ccCCCcccceeecC---CCcEEEecCCC--CCCCeEEEecCCCCCC-CCceEeccCccccC-c-------CccceeEEc
Q 044265 86 -ILTDTWCSSGQILA---DGTVLQTGGDL--DGYKKIRKFSPCEANG-LCDWVELDDVELVN-G-------RWYGTDQIL 150 (517)
Q Consensus 86 -~~~~~~c~~~~~l~---dG~l~v~GG~~--~g~~~v~~ydp~~~~~-t~~W~~~~~~~m~~-~-------R~~~s~~~L 150 (517)
..++..|.+..+.. +..++++..-. .......++=-. +. ..+|... ..+.. + -.|++++.+
T Consensus 269 ~~l~~~~~~~~~i~~~~~~~~~ll~~~p~~~~~R~~l~l~~S~--D~~G~tW~~~--~~~~~g~~~~~~~~~~ys~l~~~ 344 (386)
T 2xzi_A 269 AGLPDPACQGSVLRYNSDAPARTIFLNSASGTSRRAMRVRISY--DADAKKFNYG--RKLEDAKVSGAGHEGGYSSMTKT 344 (386)
T ss_dssp EEEEECSCCCEEEEEESSSSCEEEEEEECSSSCSCCEEEEEEC--STTCCCCCCC--EEGGGGCCSSSCEEEEEEEEEEC
T ss_pred CCCCCCCCccEEEEecCCCCCEEEEECCCCCCCCcceEEEEEc--CCCCCccCCc--eEEecCCccccCCceEeceeEEC
Confidence 23344565554432 34444444211 111222222111 11 3578654 22221 1 347777788
Q ss_pred CCCcEEEE
Q 044265 151 PDGSVIIL 158 (517)
Q Consensus 151 ~dG~v~vv 158 (517)
+||+|+++
T Consensus 345 ~dg~l~~l 352 (386)
T 2xzi_A 345 GDYKIGAL 352 (386)
T ss_dssp TTSCEEEE
T ss_pred CCCEEEEE
Confidence 89999876
No 297
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=21.10 E-value=2.1e+02 Score=30.57 Aligned_cols=82 Identities=6% Similarity=-0.070 Sum_probs=47.6
Q ss_pred eEEEEECCCCCeEEccccCC--Cccc---ceeecCCCcEEEecCCCC------CCCeEEEecCCCCCCCCceEeccCccc
Q 044265 70 HSAILDLQTNQIRPLMILTD--TWCS---SGQILADGTVLQTGGDLD------GYKKIRKFSPCEANGLCDWVELDDVEL 138 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~--~~c~---~~~~l~dG~l~v~GG~~~------g~~~v~~ydp~~~~~t~~W~~~~~~~m 138 (517)
.+.+||+.+++-+.+...+. .+.. ...+.+||+.++++.... ....+.+||.. +.+...+ ..
T Consensus 37 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~----~~~~~~l--~~- 109 (740)
T 4a5s_A 37 NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN----KRQLITE--ER- 109 (740)
T ss_dssp EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT----TTEECCS--SC-
T ss_pred cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECC----CCcEEEc--cc-
Confidence 36789999888665543332 1111 135679999888776421 12467789988 5554433 11
Q ss_pred cCcCccceeEEcCCCcEEEEc
Q 044265 139 VNGRWYGTDQILPDGSVIILG 159 (517)
Q Consensus 139 ~~~R~~~s~~~L~dG~v~vvG 159 (517)
.+......+.-|||+.++.+
T Consensus 110 -~~~~~~~~~~SPdG~~la~~ 129 (740)
T 4a5s_A 110 -IPNNTQWVTWSPVGHKLAYV 129 (740)
T ss_dssp -CCTTEEEEEECSSTTCEEEE
T ss_pred -CCCcceeeEECCCCCEEEEE
Confidence 12233455667788766655
No 298
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=21.01 E-value=4.4e+02 Score=23.42 Aligned_cols=133 Identities=11% Similarity=-0.049 Sum_probs=64.2
Q ss_pred eEEEEECCCCCeEEccccCCCcccceeecC-CCcEEEecCCCCCCCeEEEecCCCCCCCCceEeccCccccCcCccceeE
Q 044265 70 HSAILDLQTNQIRPLMILTDTWCSSGQILA-DGTVLQTGGDLDGYKKIRKFSPCEANGLCDWVELDDVELVNGRWYGTDQ 148 (517)
Q Consensus 70 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~v~GG~~~g~~~v~~ydp~~~~~t~~W~~~~~~~m~~~R~~~s~~ 148 (517)
.+..||+.++....+.......-.+.++.+ +++||++-.. ...+.++|+. ...-..+....+..+ ...+
T Consensus 59 ~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~---~~~I~~~~~~----g~~~~~~~~~~~~~P---~~i~ 128 (267)
T 1npe_A 59 SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ---LDRIEVAKMD----GTQRRVLFDTGLVNP---RGIV 128 (267)
T ss_dssp EEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT---TTEEEEEETT----SCSCEEEECSSCSSE---EEEE
T ss_pred EEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC---CCEEEEEEcC----CCCEEEEEECCCCCc---cEEE
Confidence 466788876654333211111122333444 5789988543 3688999886 222112101122222 2445
Q ss_pred EcC-CCcEEEEcCCC-CCceEEe-CCCCCceeccchhhccccccCCCCceE-EEccC-CcEEEEEC--CceEEEeCCCC
Q 044265 149 ILP-DGSVIILGGKG-ANTVEYY-PPRNGAVSFPFLADVEDKQMDNLYPYV-HLLPN-GHLFIFAN--DKAVMYDYETN 220 (517)
Q Consensus 149 ~L~-dG~v~vvGG~~-~~~~E~y-P~~~~w~~~~~l~~t~~~~~~~~yp~~-~~~~~-G~iyv~Gg--~~~~~ydp~t~ 220 (517)
+-+ +|++|+..... ...++++ +....-.... .. .-..|.. ++-++ ++||+.-. +.+.+||+...
T Consensus 129 vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~---~~-----~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 129 TDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA---QD-----NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp EETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE---CT-----TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred EeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEE---EC-----CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 555 58899886432 2455566 4322111110 00 0013333 33354 57887643 46777777654
Done!