Query 044266
Match_columns 462
No_of_seqs 140 out of 1238
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 22:50:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044266.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044266hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.6E-70 8.8E-75 531.4 36.5 430 4-454 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.8E-66 9.4E-71 514.1 36.6 447 3-454 7-478 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 3.6E-63 1.2E-67 489.9 41.6 436 3-455 5-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-63 7.7E-68 488.2 37.5 437 3-456 6-453 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 3E-61 1E-65 474.5 35.7 429 4-455 9-463 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.1E-47 7.3E-52 374.6 33.9 381 2-434 10-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 6.4E-46 2.2E-50 361.5 25.1 358 3-453 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.6E-44 5.5E-49 352.8 25.6 366 5-434 1-384 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 9.9E-44 3.4E-48 347.5 24.3 365 5-434 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.6E-42 5.3E-47 339.2 32.2 368 3-434 19-397 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 6E-42 2.1E-46 333.7 32.0 369 4-434 4-382 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 6.4E-42 2.2E-46 332.8 24.8 351 5-434 1-367 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 4.6E-41 1.6E-45 331.0 27.9 375 3-454 19-434 (441)
14 2p6p_A Glycosyl transferase; X 100.0 2.8E-40 9.6E-45 319.8 32.6 359 5-457 1-381 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 6.7E-41 2.3E-45 329.1 27.3 372 3-435 6-384 (430)
16 4fzr_A SSFS6; structural genom 100.0 1.4E-38 4.9E-43 309.2 20.8 346 3-434 14-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 7.9E-38 2.7E-42 304.0 25.1 351 3-453 19-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.7E-36 5.7E-41 294.1 27.5 346 4-434 1-372 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3E-34 1E-38 280.2 29.3 346 3-434 19-392 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.2E-29 4.1E-34 242.4 26.5 318 4-427 2-333 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 2.7E-28 9.2E-33 207.4 13.9 165 254-434 5-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.1E-21 3.7E-26 187.9 23.3 321 1-432 1-337 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 3E-16 1E-20 142.1 16.2 115 270-397 157-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 9.7E-16 3.3E-20 132.9 7.0 131 268-415 26-196 (224)
25 3okp_A GDP-mannose-dependent a 99.6 2.1E-13 7E-18 131.5 22.6 321 1-425 1-351 (394)
26 1v4v_A UDP-N-acetylglucosamine 99.5 1.5E-13 5.2E-18 131.7 15.7 135 270-426 198-342 (376)
27 3c48_A Predicted glycosyltrans 99.5 6.9E-12 2.4E-16 122.7 27.2 370 3-456 19-428 (438)
28 3ot5_A UDP-N-acetylglucosamine 99.5 1.2E-12 3.9E-17 126.2 15.9 321 3-426 26-369 (403)
29 3fro_A GLGA glycogen synthase; 99.4 2.7E-11 9.3E-16 118.3 25.0 354 3-422 1-400 (439)
30 3dzc_A UDP-N-acetylglucosamine 99.4 7.2E-13 2.4E-17 127.5 12.8 327 3-427 24-376 (396)
31 1vgv_A UDP-N-acetylglucosamine 99.4 2.1E-12 7.1E-17 124.1 15.1 135 269-424 204-348 (384)
32 3beo_A UDP-N-acetylglucosamine 99.4 4.4E-12 1.5E-16 121.4 17.2 327 1-424 5-348 (375)
33 2iuy_A Avigt4, glycosyltransfe 99.4 3.3E-12 1.1E-16 120.7 15.4 158 273-459 164-341 (342)
34 2r60_A Glycosyl transferase, g 99.4 6.8E-11 2.3E-15 117.7 24.3 360 1-424 4-430 (499)
35 2gek_A Phosphatidylinositol ma 99.4 2.6E-11 8.7E-16 117.3 20.0 313 3-425 19-356 (406)
36 2jjm_A Glycosyl transferase, g 99.4 7E-10 2.4E-14 106.8 29.6 320 4-424 15-356 (394)
37 2iw1_A Lipopolysaccharide core 99.2 3.1E-09 1.1E-13 101.3 24.3 145 270-432 195-351 (374)
38 2x6q_A Trehalose-synthase TRET 99.2 1.5E-09 5E-14 105.3 21.3 85 327-425 292-386 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.2 1.1E-10 3.8E-15 111.3 11.4 319 4-421 9-345 (385)
40 3s28_A Sucrose synthase 1; gly 99.0 3.1E-08 1.1E-12 102.4 19.8 141 271-426 572-742 (816)
41 1rzu_A Glycogen synthase 1; gl 99.0 5.2E-08 1.8E-12 96.4 20.9 133 272-425 292-450 (485)
42 2qzs_A Glycogen synthase; glyc 98.9 1.7E-07 5.7E-12 92.7 22.0 135 271-425 292-451 (485)
43 2vsy_A XCC0866; transferase, g 98.8 4.5E-06 1.6E-10 84.2 30.0 89 328-427 434-531 (568)
44 3oy2_A Glycosyltransferase B73 98.7 1.1E-06 3.7E-11 84.9 20.3 140 271-428 184-365 (413)
45 2f9f_A First mannosyl transfer 98.7 5.3E-08 1.8E-12 82.2 7.8 140 272-430 24-175 (177)
46 2xci_A KDO-transferase, 3-deox 98.6 2.2E-06 7.4E-11 81.6 18.7 92 329-431 261-362 (374)
47 2hy7_A Glucuronosyltransferase 98.6 3.5E-06 1.2E-10 81.1 20.1 76 327-420 264-354 (406)
48 3qhp_A Type 1 capsular polysac 98.0 5.1E-05 1.8E-09 62.7 11.2 131 271-424 2-146 (166)
49 4gyw_A UDP-N-acetylglucosamine 97.9 0.00017 5.7E-09 74.4 14.3 172 270-456 522-708 (723)
50 3q3e_A HMW1C-like glycosyltran 97.8 0.00015 5.1E-09 71.8 12.3 145 271-426 441-596 (631)
51 3tov_A Glycosyl transferase fa 97.8 0.00047 1.6E-08 64.6 15.0 104 4-134 8-115 (349)
52 2bfw_A GLGA glycogen synthase; 97.8 0.00028 9.6E-09 60.2 12.2 83 329-424 96-187 (200)
53 1psw_A ADP-heptose LPS heptosy 97.6 0.0052 1.8E-07 57.3 18.6 103 5-134 1-106 (348)
54 3rhz_A GTF3, nucleotide sugar 97.3 0.00024 8.4E-09 66.0 5.2 108 329-452 215-336 (339)
55 2gt1_A Lipopolysaccharide hept 97.2 0.018 6.3E-07 53.0 17.2 108 5-134 1-113 (326)
56 2x0d_A WSAF; GT4 family, trans 96.4 0.0022 7.6E-08 61.5 4.7 85 327-424 294-385 (413)
57 3vue_A GBSS-I, granule-bound s 94.2 0.16 5.5E-06 50.2 9.3 134 272-417 328-476 (536)
58 1g5t_A COB(I)alamin adenosyltr 93.7 0.58 2E-05 39.1 10.2 98 4-119 28-131 (196)
59 3q0i_A Methionyl-tRNA formyltr 92.6 1.1 3.8E-05 40.7 11.4 99 1-139 4-117 (318)
60 3t5t_A Putative glycosyltransf 91.4 0.91 3.1E-05 44.0 9.8 109 329-456 353-473 (496)
61 3zqu_A Probable aromatic acid 89.5 0.58 2E-05 39.6 5.8 49 1-50 1-49 (209)
62 2phj_A 5'-nucleotidase SURE; S 89.1 1.7 5.8E-05 37.7 8.5 113 5-137 2-127 (251)
63 1uqt_A Alpha, alpha-trehalose- 88.9 1.2 4E-05 43.3 8.3 107 330-456 333-454 (482)
64 2bw0_A 10-FTHFDH, 10-formyltet 88.3 3.4 0.00011 37.7 10.5 102 3-139 21-131 (329)
65 3nb0_A Glycogen [starch] synth 88.2 2.5 8.6E-05 42.5 10.1 40 334-375 499-551 (725)
66 2ywr_A Phosphoribosylglycinami 87.6 6.7 0.00023 33.2 11.4 103 5-139 2-112 (216)
67 2q5c_A NTRC family transcripti 87.0 4.9 0.00017 33.5 10.0 44 91-140 128-171 (196)
68 2x0d_A WSAF; GT4 family, trans 86.9 0.43 1.5E-05 45.5 3.8 40 3-42 45-89 (413)
69 3auf_A Glycinamide ribonucleot 86.9 7.9 0.00027 33.1 11.4 105 3-139 21-133 (229)
70 3qxc_A Dethiobiotin synthetase 85.4 1.8 6.2E-05 37.6 6.7 37 3-39 19-57 (242)
71 3av3_A Phosphoribosylglycinami 84.7 9.7 0.00033 32.1 10.8 105 4-139 3-114 (212)
72 2wqk_A 5'-nucleotidase SURE; S 84.6 3.5 0.00012 35.9 8.1 112 5-137 2-127 (251)
73 3vue_A GBSS-I, granule-bound s 84.4 0.95 3.3E-05 44.7 5.0 40 3-42 8-53 (536)
74 3tqq_A Methionyl-tRNA formyltr 84.0 5.4 0.00018 36.1 9.4 96 4-139 2-112 (314)
75 4dim_A Phosphoribosylglycinami 83.2 5.4 0.00018 37.5 9.6 37 1-42 4-40 (403)
76 1fmt_A Methionyl-tRNA FMet for 83.1 8 0.00027 34.9 10.2 97 3-139 2-113 (314)
77 1ccw_A Protein (glutamate muta 82.2 2.9 9.8E-05 32.6 6.0 43 4-46 3-45 (137)
78 2iz6_A Molybdenum cofactor car 81.9 7.8 0.00027 31.6 8.7 76 331-417 92-173 (176)
79 3kcq_A Phosphoribosylglycinami 81.5 7 0.00024 33.1 8.6 102 1-139 5-114 (215)
80 3bfv_A CAPA1, CAPB2, membrane 81.0 15 0.0005 32.3 11.0 39 4-42 81-121 (271)
81 1j9j_A Stationary phase surviV 80.9 6.2 0.00021 34.2 8.2 111 6-137 2-128 (247)
82 3rfo_A Methionyl-tRNA formyltr 80.1 9.9 0.00034 34.4 9.6 97 3-139 3-114 (317)
83 3zzm_A Bifunctional purine bio 79.4 7.4 0.00025 37.2 8.7 102 5-125 10-118 (523)
84 3qjg_A Epidermin biosynthesis 79.2 2.6 8.8E-05 34.4 4.9 43 5-48 6-48 (175)
85 3tqr_A Phosphoribosylglycinami 79.1 13 0.00044 31.4 9.4 106 3-139 4-115 (215)
86 3fgn_A Dethiobiotin synthetase 78.8 16 0.00056 31.7 10.3 124 4-140 25-168 (251)
87 4dzz_A Plasmid partitioning pr 78.3 11 0.00038 31.1 9.1 81 6-117 2-84 (206)
88 1l5x_A SurviVal protein E; str 76.7 6.2 0.00021 34.9 7.0 111 6-138 2-128 (280)
89 2e6c_A 5'-nucleotidase SURE; S 76.6 9.7 0.00033 32.9 8.0 109 6-137 2-129 (244)
90 2yxb_A Coenzyme B12-dependent 76.4 3.9 0.00013 32.8 5.3 44 3-46 17-60 (161)
91 3cio_A ETK, tyrosine-protein k 76.3 20 0.00068 32.0 10.6 39 4-42 103-143 (299)
92 1sbz_A Probable aromatic acid 75.9 3.8 0.00013 34.1 5.1 45 5-50 1-46 (197)
93 3mcu_A Dipicolinate synthase, 75.9 3.3 0.00011 34.8 4.8 42 2-44 3-45 (207)
94 1b93_A Protein (methylglyoxal 75.8 13 0.00043 29.4 7.8 98 1-134 8-118 (152)
95 1p3y_1 MRSD protein; flavoprot 75.7 1.8 6.2E-05 36.1 3.1 46 3-49 7-52 (194)
96 3lrx_A Putative hydrogenase; a 75.6 28 0.00096 27.5 10.6 36 5-43 24-59 (158)
97 1jkx_A GART;, phosphoribosylgl 75.4 20 0.00069 30.1 9.7 101 6-139 2-111 (212)
98 3iqw_A Tail-anchored protein t 75.0 24 0.00082 32.1 10.8 41 4-44 15-56 (334)
99 3da8_A Probable 5'-phosphoribo 74.7 9.8 0.00034 32.2 7.5 106 4-139 12-121 (215)
100 3igf_A ALL4481 protein; two-do 74.5 5.5 0.00019 37.0 6.4 36 5-40 2-38 (374)
101 1meo_A Phosophoribosylglycinam 74.0 36 0.0012 28.5 10.8 103 6-139 2-111 (209)
102 2bln_A Protein YFBG; transfera 73.8 16 0.00056 32.7 9.2 95 5-139 1-107 (305)
103 2yvq_A Carbamoyl-phosphate syn 73.4 12 0.00042 29.2 7.3 96 8-134 27-130 (143)
104 1y80_A Predicted cobalamin bin 73.2 6.9 0.00023 32.9 6.3 45 4-48 88-132 (210)
105 2ejb_A Probable aromatic acid 72.6 7.1 0.00024 32.3 6.0 44 5-49 2-45 (189)
106 3la6_A Tyrosine-protein kinase 72.1 29 0.001 30.7 10.4 40 4-43 91-132 (286)
107 2pju_A Propionate catabolism o 71.5 33 0.0011 29.1 10.1 107 16-137 46-180 (225)
108 3i83_A 2-dehydropantoate 2-red 71.2 6.6 0.00022 35.6 6.1 47 4-65 2-48 (320)
109 3dm5_A SRP54, signal recogniti 71.2 16 0.00054 34.8 8.8 40 6-45 102-141 (443)
110 3lqk_A Dipicolinate synthase s 70.7 5.7 0.00019 33.2 5.0 44 3-47 6-50 (201)
111 3q9l_A Septum site-determining 70.7 34 0.0012 29.3 10.6 38 5-42 2-41 (260)
112 3gi1_A LBP, laminin-binding pr 69.9 24 0.00083 31.2 9.4 80 32-137 178-259 (286)
113 2i2x_B MTAC, methyltransferase 69.9 8.8 0.0003 33.5 6.4 41 3-43 122-162 (258)
114 3hn2_A 2-dehydropantoate 2-red 69.8 6.8 0.00023 35.3 5.8 41 4-50 2-42 (312)
115 4ds3_A Phosphoribosylglycinami 68.7 31 0.0011 28.9 9.2 103 4-138 7-117 (209)
116 2xw6_A MGS, methylglyoxal synt 68.7 16 0.00054 28.2 6.7 97 3-135 2-111 (134)
117 1g63_A Epidermin modifying enz 68.5 3.8 0.00013 33.6 3.5 45 5-50 3-47 (181)
118 1mio_A Nitrogenase molybdenum 66.2 13 0.00046 36.3 7.4 26 107-135 455-480 (533)
119 3dfz_A SIRC, precorrin-2 dehyd 65.9 61 0.0021 27.4 14.0 144 269-435 31-186 (223)
120 1mvl_A PPC decarboxylase athal 65.7 7.5 0.00026 32.7 4.8 45 4-50 19-63 (209)
121 3ug7_A Arsenical pump-driving 65.6 18 0.00061 33.2 7.8 45 4-49 25-70 (349)
122 1bg6_A N-(1-D-carboxylethyl)-L 65.4 4.4 0.00015 37.3 3.7 36 1-41 1-36 (359)
123 3ezx_A MMCP 1, monomethylamine 65.4 12 0.00042 31.5 6.2 45 4-48 92-136 (215)
124 3u7q_B Nitrogenase molybdenum- 64.6 55 0.0019 31.9 11.3 27 107-136 437-470 (523)
125 3zq6_A Putative arsenical pump 64.1 12 0.00042 33.8 6.4 38 5-42 14-52 (324)
126 2xxa_A Signal recognition part 62.8 25 0.00086 33.3 8.4 40 6-45 102-142 (433)
127 3vot_A L-amino acid ligase, BL 62.7 17 0.00057 34.4 7.3 98 1-132 1-101 (425)
128 1vmd_A MGS, methylglyoxal synt 62.5 27 0.00092 28.3 7.2 95 4-134 27-134 (178)
129 1qgu_B Protein (nitrogenase mo 62.4 43 0.0015 32.6 10.2 26 107-135 433-465 (519)
130 2vqe_B 30S ribosomal protein S 62.4 2.2 7.4E-05 37.1 0.8 33 107-139 157-191 (256)
131 3rg8_A Phosphoribosylaminoimid 61.8 44 0.0015 26.4 8.2 138 271-435 3-149 (159)
132 3ghy_A Ketopantoate reductase 61.7 7 0.00024 35.7 4.3 42 4-50 3-44 (335)
133 4b4o_A Epimerase family protei 60.9 7.1 0.00024 34.7 4.1 33 5-41 1-33 (298)
134 3o1l_A Formyltetrahydrofolate 60.3 82 0.0028 28.0 10.8 104 3-138 104-212 (302)
135 1qzu_A Hypothetical protein MD 60.0 7.1 0.00024 32.8 3.6 46 4-50 19-65 (206)
136 1kjn_A MTH0777; hypotethical p 59.9 9 0.00031 29.9 3.8 47 4-50 6-54 (157)
137 1id1_A Putative potassium chan 59.9 6.9 0.00024 30.8 3.5 33 4-41 3-35 (153)
138 1mio_B Nitrogenase molybdenum 59.8 34 0.0012 32.6 8.9 26 107-135 384-409 (458)
139 3hwr_A 2-dehydropantoate 2-red 59.6 9.9 0.00034 34.4 4.8 42 4-50 19-60 (318)
140 2o1e_A YCDH; alpha-beta protei 59.3 41 0.0014 30.2 8.8 80 32-137 189-270 (312)
141 1xmp_A PURE, phosphoribosylami 58.9 68 0.0023 25.7 10.0 145 270-438 11-165 (170)
142 2pju_A Propionate catabolism o 58.8 10 0.00034 32.4 4.4 29 347-376 64-92 (225)
143 2lpm_A Two-component response 58.7 7.2 0.00025 29.6 3.2 40 94-136 42-86 (123)
144 3n7t_A Macrophage binding prot 58.7 23 0.00078 30.6 6.8 38 4-41 9-57 (247)
145 1xrs_B D-lysine 5,6-aminomutas 58.5 28 0.00097 30.3 7.3 47 3-49 119-174 (262)
146 1pjq_A CYSG, siroheme synthase 58.3 76 0.0026 30.2 11.0 146 269-435 12-168 (457)
147 3n0v_A Formyltetrahydrofolate 58.3 71 0.0024 28.2 10.0 104 3-138 89-197 (286)
148 3pdi_B Nitrogenase MOFE cofact 58.0 15 0.00051 35.2 5.9 26 107-135 374-399 (458)
149 2zki_A 199AA long hypothetical 57.7 11 0.00037 31.2 4.4 41 1-42 1-42 (199)
150 3ego_A Probable 2-dehydropanto 57.6 11 0.00037 33.9 4.7 41 4-50 2-43 (307)
151 4ehi_A Bifunctional purine bio 57.4 17 0.00058 34.9 6.0 41 16-67 32-72 (534)
152 2lnd_A De novo designed protei 56.6 9.9 0.00034 25.7 3.1 49 364-417 49-100 (112)
153 3lou_A Formyltetrahydrofolate 56.2 1.1E+02 0.0037 27.1 10.9 105 3-139 94-203 (292)
154 3oow_A Phosphoribosylaminoimid 56.2 75 0.0026 25.3 10.0 145 271-439 6-160 (166)
155 2r8r_A Sensor protein; KDPD, P 56.0 14 0.00049 31.4 4.8 39 4-42 6-44 (228)
156 3ors_A N5-carboxyaminoimidazol 55.9 75 0.0026 25.2 9.1 140 271-436 4-155 (163)
157 3p9x_A Phosphoribosylglycinami 55.8 90 0.0031 26.1 10.0 104 4-139 2-113 (211)
158 4hcj_A THIJ/PFPI domain protei 55.2 23 0.00077 28.8 5.8 42 1-42 4-45 (177)
159 2ixd_A LMBE-related protein; h 55.1 49 0.0017 28.4 8.3 35 5-40 4-39 (242)
160 3io3_A DEHA2D07832P; chaperone 54.8 48 0.0016 30.3 8.6 39 5-43 18-59 (348)
161 3tov_A Glycosyl transferase fa 54.7 58 0.002 29.6 9.3 100 6-139 187-290 (349)
162 3u7q_A Nitrogenase molybdenum- 54.7 62 0.0021 31.2 9.7 93 4-135 348-441 (492)
163 3sc4_A Short chain dehydrogena 54.6 78 0.0027 27.7 9.9 36 4-42 8-43 (285)
164 2q5c_A NTRC family transcripti 54.5 8.9 0.0003 31.9 3.3 30 346-376 51-80 (196)
165 1efp_B ETF, protein (electron 54.5 66 0.0023 27.8 9.0 31 107-137 112-148 (252)
166 1o4v_A Phosphoribosylaminoimid 54.4 85 0.0029 25.4 10.7 142 270-437 13-164 (183)
167 3dhn_A NAD-dependent epimerase 54.1 12 0.0004 31.6 4.2 38 1-42 1-38 (227)
168 3ih5_A Electron transfer flavo 54.0 11 0.00039 31.8 4.0 110 5-137 4-123 (217)
169 1pq4_A Periplasmic binding pro 52.6 1.2E+02 0.0042 26.7 11.0 80 33-140 190-271 (291)
170 3gem_A Short chain dehydrogena 52.1 65 0.0022 27.8 8.8 36 5-43 27-62 (260)
171 3bbn_B Ribosomal protein S2; s 52.1 92 0.0031 26.5 9.2 32 108-139 157-190 (231)
172 3cx3_A Lipoprotein; zinc-bindi 51.8 39 0.0013 29.8 7.3 80 32-137 176-257 (284)
173 1yt5_A Inorganic polyphosphate 51.4 7.8 0.00027 33.9 2.6 52 347-418 42-96 (258)
174 1uan_A Hypothetical protein TT 51.4 72 0.0024 27.0 8.7 35 5-40 2-37 (227)
175 1o97_C Electron transferring f 51.2 76 0.0026 27.6 8.9 31 107-137 111-147 (264)
176 2dzd_A Pyruvate carboxylase; b 51.2 51 0.0017 31.4 8.6 34 5-43 7-40 (461)
177 3cky_A 2-hydroxymethyl glutara 51.1 17 0.00057 32.4 4.9 36 1-41 1-36 (301)
178 1z7e_A Protein aRNA; rossmann 50.9 27 0.00093 35.2 6.9 95 5-139 1-107 (660)
179 3gl9_A Response regulator; bet 50.8 22 0.00077 26.1 4.9 41 96-139 37-86 (122)
180 2ew2_A 2-dehydropantoate 2-red 50.4 20 0.00067 32.0 5.3 42 4-50 3-45 (316)
181 3hn7_A UDP-N-acetylmuramate-L- 49.7 90 0.0031 30.3 10.2 34 4-41 19-52 (524)
182 3to5_A CHEY homolog; alpha(5)b 49.6 18 0.00062 27.8 4.2 33 107-139 56-97 (134)
183 4e12_A Diketoreductase; oxidor 49.5 14 0.00049 32.6 4.1 36 1-41 1-36 (283)
184 1eiw_A Hypothetical protein MT 49.1 28 0.00095 25.8 4.9 65 342-417 36-109 (111)
185 4gi5_A Quinone reductase; prot 49.0 29 0.00098 30.7 5.8 38 2-39 20-60 (280)
186 3mc3_A DSRE/DSRF-like family p 48.7 31 0.0011 26.4 5.5 42 4-45 15-59 (134)
187 2j37_W Signal recognition part 48.6 57 0.002 31.5 8.4 39 6-44 103-141 (504)
188 2hy5_B Intracellular sulfur ox 47.9 27 0.00094 26.9 4.9 39 6-44 7-48 (136)
189 3ius_A Uncharacterized conserv 47.7 26 0.0009 30.6 5.6 49 4-66 5-54 (286)
190 2d1p_A TUSD, hypothetical UPF0 47.2 36 0.0012 26.4 5.5 41 4-44 12-56 (140)
191 4e21_A 6-phosphogluconate dehy 47.2 14 0.00048 34.1 3.7 36 1-41 19-54 (358)
192 3g1w_A Sugar ABC transporter; 47.1 1.4E+02 0.0049 25.9 11.5 31 107-137 60-94 (305)
193 3kkl_A Probable chaperone prot 46.7 35 0.0012 29.4 5.9 39 4-42 3-52 (244)
194 3obi_A Formyltetrahydrofolate 46.6 54 0.0019 29.0 7.3 105 3-139 88-198 (288)
195 3tl4_X Glutaminyl-tRNA synthet 46.6 16 0.00053 30.0 3.4 40 386-434 108-154 (187)
196 3bgw_A DNAB-like replicative h 46.2 43 0.0015 31.8 7.1 40 6-45 199-238 (444)
197 3lp6_A Phosphoribosylaminoimid 46.1 1.1E+02 0.0039 24.5 9.5 138 270-435 7-156 (174)
198 2hy5_A Putative sulfurtransfer 46.0 35 0.0012 25.9 5.4 40 6-45 2-45 (130)
199 1p9o_A Phosphopantothenoylcyst 45.9 15 0.00052 33.0 3.6 24 20-43 67-90 (313)
200 2o6l_A UDP-glucuronosyltransfe 45.9 77 0.0026 24.9 7.7 90 6-137 22-114 (170)
201 2zts_A Putative uncharacterize 45.3 93 0.0032 26.1 8.7 43 6-48 32-75 (251)
202 1psw_A ADP-heptose LPS heptosy 45.1 1.7E+02 0.0058 26.1 12.0 102 6-137 182-288 (348)
203 1lss_A TRK system potassium up 44.6 20 0.0007 27.1 3.9 34 4-42 4-37 (140)
204 2g1u_A Hypothetical protein TM 44.6 28 0.00096 27.2 4.7 34 4-42 19-52 (155)
205 3mjf_A Phosphoribosylamine--gl 44.4 44 0.0015 31.6 6.8 25 4-33 3-27 (431)
206 3nrb_A Formyltetrahydrofolate 44.1 62 0.0021 28.6 7.3 108 3-139 87-197 (287)
207 3eag_A UDP-N-acetylmuramate:L- 43.5 50 0.0017 29.8 6.8 35 3-41 3-37 (326)
208 2r85_A PURP protein PF1517; AT 43.5 21 0.00071 32.2 4.3 34 4-43 2-35 (334)
209 2w70_A Biotin carboxylase; lig 43.5 68 0.0023 30.3 8.1 32 5-41 3-34 (449)
210 1j8m_F SRP54, signal recogniti 43.4 1.5E+02 0.005 26.2 9.8 39 6-44 100-138 (297)
211 3h7a_A Short chain dehydrogena 43.4 1.5E+02 0.0052 25.1 10.0 36 4-42 6-41 (252)
212 1p3y_1 MRSD protein; flavoprot 43.3 51 0.0017 27.2 6.2 140 270-418 9-186 (194)
213 3qha_A Putative oxidoreductase 43.2 13 0.00044 33.2 2.8 34 4-42 15-48 (296)
214 3kuu_A Phosphoribosylaminoimid 43.2 1.3E+02 0.0044 24.2 9.7 143 271-439 13-167 (174)
215 1evy_A Glycerol-3-phosphate de 43.1 11 0.00036 34.9 2.2 32 5-41 16-47 (366)
216 2w84_A Peroxisomal membrane pr 43.0 25 0.00085 23.4 3.3 48 404-454 13-60 (70)
217 4hb9_A Similarities with proba 43.0 17 0.00058 33.8 3.7 30 4-38 1-30 (412)
218 2woo_A ATPase GET3; tail-ancho 42.7 96 0.0033 27.9 8.6 39 5-43 19-58 (329)
219 3s2u_A UDP-N-acetylglucosamine 42.5 57 0.002 29.8 7.2 27 344-372 92-121 (365)
220 3ff5_A PEX14P, peroxisomal bio 42.5 24 0.0008 22.2 3.0 45 404-451 8-52 (54)
221 2fb6_A Conserved hypothetical 42.3 41 0.0014 25.1 5.0 45 1-45 4-52 (117)
222 1qyd_A Pinoresinol-lariciresin 41.8 19 0.00066 32.0 3.8 38 1-42 1-38 (313)
223 1g8m_A Aicar transformylase-IM 41.7 51 0.0018 32.1 6.6 99 4-122 5-109 (593)
224 3bul_A Methionine synthase; tr 41.6 41 0.0014 33.1 6.1 44 4-47 98-141 (579)
225 2qyt_A 2-dehydropantoate 2-red 41.5 17 0.00058 32.6 3.3 41 4-49 8-54 (317)
226 1jx7_A Hypothetical protein YC 41.4 37 0.0013 24.9 4.8 42 6-47 3-49 (117)
227 1kyq_A Met8P, siroheme biosynt 41.4 1.4E+02 0.0048 26.1 9.1 83 348-435 108-210 (274)
228 3t6k_A Response regulator rece 41.3 38 0.0013 25.4 4.9 33 107-139 47-88 (136)
229 1rw7_A YDR533CP; alpha-beta sa 41.2 53 0.0018 28.1 6.3 39 4-42 3-52 (243)
230 1qkk_A DCTD, C4-dicarboxylate 41.1 73 0.0025 24.3 6.8 59 364-428 73-131 (155)
231 3lyu_A Putative hydrogenase; t 41.1 22 0.00076 27.5 3.5 36 5-43 19-54 (142)
232 2h31_A Multifunctional protein 41.0 2E+02 0.0068 26.9 10.4 138 270-435 265-412 (425)
233 3obb_A Probable 3-hydroxyisobu 40.4 31 0.0011 30.8 4.8 33 4-41 3-35 (300)
234 3l7i_A Teichoic acid biosynthe 40.3 24 0.00081 36.1 4.5 114 334-456 605-721 (729)
235 1z82_A Glycerol-3-phosphate de 40.1 22 0.00076 32.2 3.9 42 4-50 14-56 (335)
236 3llv_A Exopolyphosphatase-rela 39.9 17 0.0006 27.8 2.7 34 4-42 6-39 (141)
237 3doj_A AT3G25530, dehydrogenas 39.8 30 0.001 31.0 4.6 35 3-42 20-54 (310)
238 3kjh_A CO dehydrogenase/acetyl 39.6 20 0.00068 30.6 3.4 38 5-42 1-38 (254)
239 4fn4_A Short chain dehydrogena 39.6 1.5E+02 0.0051 25.5 8.9 35 4-41 6-40 (254)
240 3kl4_A SRP54, signal recogniti 39.5 33 0.0011 32.5 5.0 41 5-45 97-138 (433)
241 3ty2_A 5'-nucleotidase SURE; s 39.1 37 0.0013 29.5 4.8 113 3-137 10-135 (261)
242 3f6p_A Transcriptional regulat 39.1 43 0.0015 24.3 4.8 33 107-139 45-83 (120)
243 1o97_D Electron transferring f 38.6 1E+02 0.0034 27.7 7.9 110 6-138 2-120 (320)
244 4e5s_A MCCFLIKE protein (BA_56 38.4 32 0.0011 31.2 4.6 73 283-374 62-136 (331)
245 1qyc_A Phenylcoumaran benzylic 38.4 24 0.00081 31.3 3.8 37 1-41 1-37 (308)
246 2gk4_A Conserved hypothetical 38.3 24 0.00082 30.1 3.5 22 21-42 32-53 (232)
247 3m6m_D Sensory/regulatory prot 38.3 32 0.0011 26.1 4.1 33 107-139 57-100 (143)
248 2i2c_A Probable inorganic poly 38.2 11 0.00038 33.2 1.5 52 347-418 36-93 (272)
249 4dll_A 2-hydroxy-3-oxopropiona 38.1 38 0.0013 30.4 5.1 33 4-41 31-63 (320)
250 3gpi_A NAD-dependent epimerase 37.8 34 0.0012 29.8 4.7 34 4-42 3-36 (286)
251 2prs_A High-affinity zinc upta 37.6 52 0.0018 29.0 5.8 44 91-137 209-254 (284)
252 2a33_A Hypothetical protein; s 37.6 45 0.0015 28.1 5.0 43 331-374 94-147 (215)
253 2xj4_A MIPZ; replication, cell 37.5 34 0.0012 30.1 4.6 39 4-42 3-43 (286)
254 4grd_A N5-CAIR mutase, phospho 37.4 1.6E+02 0.0054 23.6 8.2 145 269-437 11-165 (173)
255 3enk_A UDP-glucose 4-epimerase 37.4 34 0.0012 30.8 4.7 37 1-41 2-38 (341)
256 2ehd_A Oxidoreductase, oxidore 37.1 44 0.0015 28.1 5.1 38 1-41 1-38 (234)
257 3s40_A Diacylglycerol kinase; 36.6 58 0.002 29.0 6.0 27 348-374 65-97 (304)
258 3qjg_A Epidermin biosynthesis 36.5 1.1E+02 0.0038 24.6 7.0 114 270-393 6-143 (175)
259 3dfu_A Uncharacterized protein 36.5 26 0.00087 30.0 3.4 34 3-41 5-38 (232)
260 3uf0_A Short-chain dehydrogena 36.2 2.1E+02 0.0071 24.6 9.7 34 5-41 31-64 (273)
261 2ffh_A Protein (FFH); SRP54, s 35.9 2.2E+02 0.0075 26.7 10.0 40 6-45 100-139 (425)
262 3fwz_A Inner membrane protein 35.9 37 0.0013 26.0 4.0 35 4-43 7-41 (140)
263 3dme_A Conserved exported prot 35.7 21 0.00072 32.5 3.0 36 1-41 1-36 (369)
264 1wrd_A TOM1, target of MYB pro 35.7 74 0.0025 23.1 5.3 30 403-435 3-32 (103)
265 2h78_A Hibadh, 3-hydroxyisobut 35.5 31 0.0011 30.6 4.1 34 3-41 2-35 (302)
266 1iow_A DD-ligase, DDLB, D-ALA\ 35.5 64 0.0022 28.4 6.2 39 4-42 2-44 (306)
267 3ouz_A Biotin carboxylase; str 35.4 1.2E+02 0.0042 28.5 8.5 35 4-43 6-40 (446)
268 4gbj_A 6-phosphogluconate dehy 35.2 36 0.0012 30.3 4.3 30 5-39 6-35 (297)
269 2vo1_A CTP synthase 1; pyrimid 35.2 40 0.0014 29.3 4.3 41 3-43 21-64 (295)
270 4huj_A Uncharacterized protein 35.0 16 0.00054 30.9 1.9 33 3-40 22-54 (220)
271 3kvo_A Hydroxysteroid dehydrog 35.0 2.1E+02 0.0072 25.8 9.7 35 5-42 45-79 (346)
272 2l82_A Designed protein OR32; 34.8 74 0.0025 22.9 4.9 34 272-309 3-36 (162)
273 1ks9_A KPA reductase;, 2-dehyd 34.8 30 0.001 30.3 3.8 32 6-42 2-33 (291)
274 4g81_D Putative hexonate dehyd 34.7 1.4E+02 0.0049 25.7 8.0 35 4-41 8-42 (255)
275 3ew7_A LMO0794 protein; Q8Y8U8 34.6 36 0.0012 28.2 4.1 33 6-42 2-34 (221)
276 3qrx_B Melittin; calcium-bindi 34.6 10 0.00036 19.0 0.4 17 355-371 1-17 (26)
277 2vpq_A Acetyl-COA carboxylase; 34.5 1.1E+02 0.0039 28.7 8.1 32 6-42 3-34 (451)
278 4g9b_A Beta-PGM, beta-phosphog 34.4 1.7E+02 0.0057 24.5 8.6 95 21-137 100-194 (243)
279 2a5l_A Trp repressor binding p 34.4 53 0.0018 26.8 5.1 39 4-42 5-44 (200)
280 1pno_A NAD(P) transhydrogenase 34.1 44 0.0015 26.6 4.0 36 5-42 24-64 (180)
281 1u0t_A Inorganic polyphosphate 34.1 14 0.00049 33.1 1.5 32 341-374 72-107 (307)
282 3pgx_A Carveol dehydrogenase; 34.1 1.4E+02 0.0049 25.7 8.2 33 5-40 15-47 (280)
283 1ulz_A Pyruvate carboxylase N- 33.8 1.2E+02 0.0041 28.6 8.1 32 6-42 4-35 (451)
284 3l8h_A Putative haloacid dehal 33.8 1.7E+02 0.0058 22.9 10.1 23 21-43 32-54 (179)
285 2qs7_A Uncharacterized protein 33.7 52 0.0018 25.5 4.6 44 6-49 9-53 (144)
286 4g6h_A Rotenone-insensitive NA 33.7 24 0.00081 34.3 3.1 35 3-42 41-75 (502)
287 1d4o_A NADP(H) transhydrogenas 33.5 45 0.0015 26.6 4.0 38 5-42 23-63 (184)
288 2l2q_A PTS system, cellobiose- 33.5 50 0.0017 24.1 4.2 37 3-39 3-39 (109)
289 3ic5_A Putative saccharopine d 33.4 87 0.003 22.4 5.8 34 4-42 5-39 (118)
290 3g79_A NDP-N-acetyl-D-galactos 33.1 39 0.0013 32.5 4.4 37 2-43 16-54 (478)
291 3p9x_A Phosphoribosylglycinami 32.9 67 0.0023 26.9 5.3 46 92-137 14-60 (211)
292 3m1a_A Putative dehydrogenase; 32.9 57 0.0019 28.4 5.3 39 1-42 1-39 (281)
293 3t7c_A Carveol dehydrogenase; 32.8 1.9E+02 0.0066 25.2 8.9 34 5-41 28-61 (299)
294 1dbw_A Transcriptional regulat 32.7 71 0.0024 23.2 5.2 33 107-139 46-85 (126)
295 2an1_A Putative kinase; struct 32.7 16 0.00056 32.4 1.7 27 348-374 65-95 (292)
296 1c0p_A D-amino acid oxidase; a 32.6 37 0.0013 30.9 4.2 35 2-41 4-38 (363)
297 1vi6_A 30S ribosomal protein S 32.6 38 0.0013 28.3 3.7 33 107-139 114-148 (208)
298 3tl3_A Short-chain type dehydr 32.5 1.2E+02 0.0042 25.7 7.4 33 5-40 9-41 (257)
299 2raf_A Putative dinucleotide-b 32.3 38 0.0013 28.2 3.8 33 4-41 19-51 (209)
300 4fgs_A Probable dehydrogenase 32.2 1.7E+02 0.0058 25.5 8.1 34 5-41 29-62 (273)
301 3c3m_A Response regulator rece 32.1 62 0.0021 24.1 4.9 32 107-138 46-86 (138)
302 3d3j_A Enhancer of mRNA-decapp 32.0 41 0.0014 30.1 4.1 34 5-41 133-168 (306)
303 3g17_A Similar to 2-dehydropan 31.9 13 0.00043 33.2 0.8 33 4-41 2-34 (294)
304 3h2s_A Putative NADH-flavin re 31.9 42 0.0014 27.9 4.1 33 6-42 2-34 (224)
305 3gt7_A Sensor protein; structu 31.8 65 0.0022 24.7 5.0 41 96-139 42-91 (154)
306 3pnx_A Putative sulfurtransfer 31.7 66 0.0023 25.5 4.9 43 7-49 8-50 (160)
307 3grc_A Sensor protein, kinase; 31.6 78 0.0027 23.5 5.4 33 107-139 49-90 (140)
308 3ged_A Short-chain dehydrogena 31.6 2E+02 0.0069 24.5 8.4 33 6-41 3-35 (247)
309 1e2b_A Enzyme IIB-cellobiose; 31.5 89 0.003 22.7 5.3 38 4-41 3-40 (106)
310 2q3e_A UDP-glucose 6-dehydroge 31.4 44 0.0015 32.0 4.5 36 1-41 2-39 (467)
311 3md9_A Hemin-binding periplasm 31.1 46 0.0016 28.5 4.3 30 107-136 58-89 (255)
312 2d1p_B TUSC, hypothetical UPF0 31.1 85 0.0029 23.2 5.3 38 7-44 5-44 (119)
313 2fsv_C NAD(P) transhydrogenase 31.1 51 0.0017 26.9 4.0 36 5-42 47-87 (203)
314 3qsg_A NAD-binding phosphogluc 31.0 43 0.0015 30.0 4.2 33 4-41 24-57 (312)
315 2izz_A Pyrroline-5-carboxylate 30.9 33 0.0011 30.9 3.4 37 1-42 19-59 (322)
316 2wm3_A NMRA-like family domain 30.8 78 0.0027 27.7 5.9 39 1-43 2-41 (299)
317 4hn9_A Iron complex transport 30.8 38 0.0013 30.6 3.9 31 107-137 115-145 (335)
318 2ywx_A Phosphoribosylaminoimid 30.8 2E+02 0.0067 22.7 9.4 134 273-435 2-144 (157)
319 3of5_A Dethiobiotin synthetase 30.7 48 0.0016 28.1 4.2 36 4-39 3-40 (228)
320 3d3k_A Enhancer of mRNA-decapp 30.7 45 0.0015 29.0 4.1 34 5-41 86-121 (259)
321 3hh8_A Metal ABC transporter s 30.5 98 0.0033 27.4 6.4 74 34-133 184-259 (294)
322 1djl_A Transhydrogenase DIII; 30.5 52 0.0018 26.9 4.0 36 5-42 46-86 (207)
323 2nly_A BH1492 protein, diverge 30.5 2.4E+02 0.0082 24.1 8.5 39 91-134 114-155 (245)
324 1jzt_A Hypothetical 27.5 kDa p 30.5 39 0.0013 29.1 3.6 34 5-41 59-94 (246)
325 1gsa_A Glutathione synthetase; 30.5 49 0.0017 29.2 4.5 37 5-41 2-41 (316)
326 2ca5_A MXIH; transport protein 30.3 77 0.0026 21.9 4.2 50 405-458 27-83 (85)
327 2rjn_A Response regulator rece 30.3 76 0.0026 24.2 5.2 43 94-139 40-89 (154)
328 3bfj_A 1,3-propanediol oxidore 30.2 2.4E+02 0.0084 25.8 9.4 94 22-139 22-144 (387)
329 1ydg_A Trp repressor binding p 30.2 72 0.0024 26.3 5.3 40 3-42 5-45 (211)
330 3f6r_A Flavodoxin; FMN binding 30.0 71 0.0024 24.5 4.9 38 5-42 2-40 (148)
331 3bch_A 40S ribosomal protein S 29.9 44 0.0015 28.8 3.7 33 107-139 150-184 (253)
332 2rir_A Dipicolinate synthase, 29.9 68 0.0023 28.4 5.3 34 1-39 4-37 (300)
333 2o8n_A APOA-I binding protein; 29.8 50 0.0017 28.8 4.2 34 5-41 80-115 (265)
334 3nhm_A Response regulator; pro 29.8 87 0.003 22.9 5.3 32 107-138 46-86 (133)
335 1q74_A 1D-MYO-inosityl 2-aceta 29.8 64 0.0022 28.8 5.0 41 1-41 1-41 (303)
336 3afo_A NADH kinase POS5; alpha 29.6 24 0.00082 32.8 2.2 31 341-373 111-146 (388)
337 2ewd_A Lactate dehydrogenase,; 29.6 28 0.00095 31.3 2.6 37 1-42 1-38 (317)
338 4ezb_A Uncharacterized conserv 29.4 40 0.0014 30.3 3.7 34 4-42 24-58 (317)
339 4e7p_A Response regulator; DNA 29.4 83 0.0028 23.8 5.2 44 94-140 55-105 (150)
340 3l77_A Short-chain alcohol deh 29.4 58 0.002 27.3 4.6 35 5-42 2-36 (235)
341 4eg0_A D-alanine--D-alanine li 29.3 78 0.0027 28.2 5.7 39 4-42 13-55 (317)
342 3uhj_A Probable glycerol dehyd 29.3 2E+02 0.0069 26.5 8.5 93 23-139 43-140 (387)
343 2qv7_A Diacylglycerol kinase D 29.2 40 0.0014 30.6 3.7 27 348-374 82-114 (337)
344 3euw_A MYO-inositol dehydrogen 29.1 2E+02 0.0068 25.8 8.5 107 272-396 7-122 (344)
345 1oi4_A Hypothetical protein YH 29.1 1.3E+02 0.0044 24.4 6.5 39 3-42 22-60 (193)
346 3eod_A Protein HNR; response r 29.0 78 0.0027 23.1 4.9 42 96-140 42-90 (130)
347 2x5n_A SPRPN10, 26S proteasome 28.9 83 0.0028 25.7 5.3 61 7-69 110-173 (192)
348 4b4k_A N5-carboxyaminoimidazol 28.9 2.3E+02 0.0078 22.9 11.6 145 270-438 22-176 (181)
349 1f0y_A HCDH, L-3-hydroxyacyl-C 28.9 36 0.0012 30.3 3.2 33 4-41 15-47 (302)
350 3gg2_A Sugar dehydrogenase, UD 28.9 40 0.0014 32.1 3.7 34 4-42 2-35 (450)
351 3lqk_A Dipicolinate synthase s 28.8 2.4E+02 0.0084 23.2 9.5 55 363-418 120-186 (201)
352 1u11_A PURE (N5-carboxyaminoim 28.8 2.3E+02 0.0079 22.9 9.2 145 270-438 21-175 (182)
353 1y56_B Sarcosine oxidase; dehy 28.8 30 0.001 31.8 2.8 35 3-42 4-38 (382)
354 4h1h_A LMO1638 protein; MCCF-l 28.7 46 0.0016 30.1 3.9 63 283-364 62-124 (327)
355 1u0t_A Inorganic polyphosphate 28.5 55 0.0019 29.2 4.4 40 1-40 1-41 (307)
356 3hv2_A Response regulator/HD d 28.5 82 0.0028 24.0 5.1 42 96-140 49-97 (153)
357 2w36_A Endonuclease V; hypoxan 28.4 91 0.0031 26.3 5.4 40 96-136 92-138 (225)
358 3qlj_A Short chain dehydrogena 28.4 2.7E+02 0.0092 24.6 9.2 33 5-40 27-59 (322)
359 2a33_A Hypothetical protein; s 28.4 87 0.003 26.3 5.3 38 4-41 13-54 (215)
360 3a10_A Response regulator; pho 28.4 99 0.0034 21.8 5.3 32 107-138 44-82 (116)
361 2q8p_A Iron-regulated surface 28.2 42 0.0014 28.9 3.5 31 107-137 59-90 (260)
362 3pfn_A NAD kinase; structural 28.1 23 0.00078 32.6 1.8 31 340-372 104-138 (365)
363 3hbl_A Pyruvate carboxylase; T 28.0 2.1E+02 0.0071 31.0 9.4 39 1-44 1-39 (1150)
364 3k96_A Glycerol-3-phosphate de 28.0 33 0.0011 31.5 2.9 42 4-50 29-71 (356)
365 3foj_A Uncharacterized protein 28.0 1.2E+02 0.0041 21.3 5.5 33 4-40 56-88 (100)
366 3psh_A Protein HI_1472; substr 27.9 51 0.0018 29.5 4.2 31 107-137 83-114 (326)
367 3g0o_A 3-hydroxyisobutyrate de 27.8 35 0.0012 30.4 3.0 33 4-41 7-39 (303)
368 3l6e_A Oxidoreductase, short-c 27.7 63 0.0022 27.3 4.5 35 5-42 3-37 (235)
369 2bru_C NAD(P) transhydrogenase 27.6 50 0.0017 26.4 3.3 36 5-42 31-71 (186)
370 2r7a_A Bacterial heme binding 27.6 57 0.002 27.9 4.3 30 107-136 58-89 (256)
371 2etv_A Iron(III) ABC transport 27.6 40 0.0014 30.6 3.4 31 107-137 95-126 (346)
372 1zl0_A Hypothetical protein PA 27.6 70 0.0024 28.7 4.8 75 282-375 63-139 (311)
373 1ooe_A Dihydropteridine reduct 27.5 81 0.0028 26.5 5.2 35 5-42 3-37 (236)
374 3ib6_A Uncharacterized protein 27.5 2.3E+02 0.0079 22.5 11.6 98 21-137 39-143 (189)
375 1txg_A Glycerol-3-phosphate de 27.4 49 0.0017 29.7 4.0 30 6-40 2-31 (335)
376 3b2n_A Uncharacterized protein 27.4 72 0.0025 23.5 4.4 34 107-140 48-88 (133)
377 3f67_A Putative dienelactone h 27.3 80 0.0027 26.0 5.2 35 6-40 33-67 (241)
378 2pn1_A Carbamoylphosphate synt 27.2 75 0.0026 28.4 5.2 34 3-42 3-38 (331)
379 3pef_A 6-phosphogluconate dehy 27.2 55 0.0019 28.7 4.2 33 5-42 2-34 (287)
380 3c01_A Surface presentation of 27.0 1.1E+02 0.0038 18.6 4.4 31 404-434 2-32 (48)
381 1g3q_A MIND ATPase, cell divis 26.9 69 0.0023 26.9 4.6 38 6-43 3-42 (237)
382 1tmy_A CHEY protein, TMY; chem 26.8 75 0.0026 22.7 4.4 34 107-140 46-86 (120)
383 2ph1_A Nucleotide-binding prot 26.8 50 0.0017 28.5 3.8 41 4-44 17-59 (262)
384 3vps_A TUNA, NAD-dependent epi 26.8 44 0.0015 29.6 3.5 35 4-42 7-41 (321)
385 1zgz_A Torcad operon transcrip 26.7 91 0.0031 22.3 4.9 33 107-139 45-83 (122)
386 1xhf_A DYE resistance, aerobic 26.4 1E+02 0.0036 22.0 5.2 34 107-140 46-85 (123)
387 3pdu_A 3-hydroxyisobutyrate de 26.4 47 0.0016 29.2 3.5 33 5-42 2-34 (287)
388 2qxy_A Response regulator; reg 26.3 93 0.0032 23.1 5.0 40 96-139 39-85 (142)
389 3qvl_A Putative hydantoin race 26.3 2.1E+02 0.0072 24.4 7.6 29 107-135 68-97 (245)
390 3tqr_A Phosphoribosylglycinami 26.2 95 0.0032 26.0 5.2 46 92-137 17-62 (215)
391 3dqz_A Alpha-hydroxynitrIle ly 26.2 54 0.0018 27.4 3.9 41 1-42 1-41 (258)
392 3kht_A Response regulator; PSI 26.0 1.1E+02 0.0037 22.8 5.3 43 94-139 40-91 (144)
393 3sr3_A Microcin immunity prote 26.0 56 0.0019 29.7 4.0 72 284-374 64-137 (336)
394 2ab0_A YAJL; DJ-1/THIJ superfa 25.9 1.4E+02 0.0046 24.6 6.2 38 4-42 2-39 (205)
395 3i42_A Response regulator rece 25.9 93 0.0032 22.5 4.8 32 107-138 46-86 (127)
396 3lk7_A UDP-N-acetylmuramoylala 25.9 1.4E+02 0.0048 28.2 7.0 32 4-40 9-40 (451)
397 2qzj_A Two-component response 25.8 80 0.0027 23.5 4.4 33 107-139 47-85 (136)
398 1vlj_A NADH-dependent butanol 25.8 4E+02 0.014 24.6 10.1 93 23-139 33-153 (407)
399 3cu5_A Two component transcrip 25.7 95 0.0033 23.2 4.9 39 96-137 40-85 (141)
400 3i4f_A 3-oxoacyl-[acyl-carrier 25.7 97 0.0033 26.5 5.5 36 4-42 6-41 (264)
401 3eme_A Rhodanese-like domain p 25.7 1.1E+02 0.0039 21.5 5.0 33 4-40 56-88 (103)
402 1srr_A SPO0F, sporulation resp 25.6 74 0.0025 23.0 4.1 33 107-139 46-85 (124)
403 3l4b_C TRKA K+ channel protien 25.6 25 0.00084 29.5 1.4 32 6-42 2-33 (218)
404 1hdo_A Biliverdin IX beta redu 25.4 1.5E+02 0.0052 23.7 6.5 34 5-42 4-37 (206)
405 2a9o_A Response regulator; ess 25.3 88 0.003 22.2 4.5 34 107-140 44-83 (120)
406 3l3b_A ES1 family protein; ssg 25.3 1.4E+02 0.005 25.4 6.3 38 5-42 24-65 (242)
407 2qr3_A Two-component system re 25.3 1.1E+02 0.0037 22.5 5.2 34 107-140 46-91 (140)
408 3sx6_A Sulfide-quinone reducta 25.2 73 0.0025 30.0 4.9 40 1-42 1-40 (437)
409 3e9m_A Oxidoreductase, GFO/IDH 25.1 1.5E+02 0.0051 26.5 6.8 108 272-396 8-124 (330)
410 3dtt_A NADP oxidoreductase; st 25.0 62 0.0021 27.6 4.0 34 4-42 19-52 (245)
411 3m2p_A UDP-N-acetylglucosamine 25.0 64 0.0022 28.5 4.2 34 4-41 2-35 (311)
412 1u9c_A APC35852; structural ge 24.9 1.6E+02 0.0053 24.5 6.5 38 5-42 6-52 (224)
413 1zi8_A Carboxymethylenebutenol 24.9 97 0.0033 25.4 5.3 36 6-41 29-64 (236)
414 2bon_A Lipid kinase; DAG kinas 24.8 70 0.0024 28.9 4.5 82 269-375 30-119 (332)
415 2zbw_A Thioredoxin reductase; 24.8 40 0.0014 30.2 2.8 35 3-42 4-38 (335)
416 1toa_A Tromp-1, protein (perip 24.8 3.5E+02 0.012 24.0 9.1 76 33-134 197-279 (313)
417 3orf_A Dihydropteridine reduct 24.7 87 0.003 26.7 4.9 35 5-42 22-56 (251)
418 3q2i_A Dehydrogenase; rossmann 24.7 1.7E+02 0.0058 26.4 7.2 125 271-417 15-149 (354)
419 1p6q_A CHEY2; chemotaxis, sign 24.7 1E+02 0.0034 22.4 4.8 33 107-139 50-91 (129)
420 1cp2_A CP2, nitrogenase iron p 24.6 65 0.0022 27.7 4.1 37 6-42 3-39 (269)
421 2uyy_A N-PAC protein; long-cha 24.6 54 0.0019 29.2 3.7 33 4-41 30-62 (316)
422 1u7z_A Coenzyme A biosynthesis 24.5 57 0.002 27.6 3.5 23 20-42 36-58 (226)
423 3ruf_A WBGU; rossmann fold, UD 24.5 45 0.0015 30.1 3.2 35 4-42 25-59 (351)
424 1byi_A Dethiobiotin synthase; 24.5 64 0.0022 26.8 3.9 33 7-39 4-37 (224)
425 3dii_A Short-chain dehydrogena 24.4 78 0.0027 26.9 4.5 33 6-41 3-35 (247)
426 1ydh_A AT5G11950; structural g 24.4 1.2E+02 0.004 25.5 5.4 38 4-41 9-50 (216)
427 3h4t_A Glycosyltransferase GTF 24.3 2.2E+02 0.0074 26.2 8.0 35 272-308 3-37 (404)
428 1efv_B Electron transfer flavo 24.3 74 0.0025 27.5 4.2 31 107-137 115-151 (255)
429 3rqi_A Response regulator prot 24.3 75 0.0025 25.4 4.2 41 96-139 42-89 (184)
430 3goc_A Endonuclease V; alpha-b 24.2 96 0.0033 26.4 4.8 30 107-136 106-142 (237)
431 4dgk_A Phytoene dehydrogenase; 24.2 31 0.001 33.2 2.0 30 6-40 3-32 (501)
432 2pl1_A Transcriptional regulat 24.1 1.3E+02 0.0043 21.4 5.2 33 107-139 43-82 (121)
433 1vpd_A Tartronate semialdehyde 24.1 79 0.0027 27.7 4.7 32 5-41 6-37 (299)
434 3ppi_A 3-hydroxyacyl-COA dehyd 24.1 99 0.0034 26.8 5.3 35 5-42 30-64 (281)
435 3u5t_A 3-oxoacyl-[acyl-carrier 24.1 81 0.0028 27.2 4.6 35 4-41 26-60 (267)
436 1oc2_A DTDP-glucose 4,6-dehydr 24.0 56 0.0019 29.4 3.7 37 1-41 1-39 (348)
437 1uls_A Putative 3-oxoacyl-acyl 24.0 96 0.0033 26.2 5.1 34 5-41 5-38 (245)
438 1ehi_A LMDDL2, D-alanine:D-lac 23.9 73 0.0025 29.3 4.5 38 4-41 3-45 (377)
439 4ds3_A Phosphoribosylglycinami 23.9 1.2E+02 0.0041 25.3 5.3 47 91-137 18-65 (209)
440 1dhr_A Dihydropteridine reduct 23.8 91 0.0031 26.3 4.9 34 5-41 7-40 (241)
441 3trh_A Phosphoribosylaminoimid 23.7 1.5E+02 0.0052 23.6 5.5 37 4-41 6-44 (169)
442 3nrc_A Enoyl-[acyl-carrier-pro 23.7 1.1E+02 0.0039 26.4 5.6 43 5-49 26-69 (280)
443 2hmt_A YUAA protein; RCK, KTN, 23.7 38 0.0013 25.6 2.2 33 4-41 6-38 (144)
444 4dqx_A Probable oxidoreductase 23.6 97 0.0033 26.9 5.1 35 5-42 27-61 (277)
445 3pdi_A Nitrogenase MOFE cofact 23.6 61 0.0021 31.1 4.0 26 107-135 400-425 (483)
446 4iin_A 3-ketoacyl-acyl carrier 23.6 1E+02 0.0035 26.5 5.2 34 5-41 29-62 (271)
447 4h15_A Short chain alcohol deh 23.6 1.1E+02 0.0037 26.5 5.2 34 5-41 11-44 (261)
448 1i36_A Conserved hypothetical 23.6 54 0.0019 28.2 3.4 30 6-40 2-31 (264)
449 1ybh_A Acetolactate synthase, 23.5 1.2E+02 0.004 30.0 6.1 25 349-373 78-108 (590)
450 3lyl_A 3-oxoacyl-(acyl-carrier 23.4 1E+02 0.0035 26.0 5.1 36 4-42 4-39 (247)
451 3trh_A Phosphoribosylaminoimid 23.3 2.8E+02 0.0097 22.1 10.5 140 270-435 6-157 (169)
452 3dqp_A Oxidoreductase YLBE; al 23.3 70 0.0024 26.4 3.9 33 6-42 2-34 (219)
453 3zv4_A CIS-2,3-dihydrobiphenyl 23.3 99 0.0034 26.9 5.1 38 1-41 1-38 (281)
454 1jay_A Coenzyme F420H2:NADP+ o 23.3 69 0.0024 26.4 3.9 31 6-41 2-33 (212)
455 4fbl_A LIPS lipolytic enzyme; 23.3 58 0.002 28.2 3.5 33 9-41 55-87 (281)
456 4e08_A DJ-1 beta; flavodoxin-l 23.2 1.8E+02 0.0062 23.3 6.4 37 5-42 6-42 (190)
457 3guy_A Short-chain dehydrogena 23.2 65 0.0022 27.0 3.7 34 6-42 2-35 (230)
458 1jq5_A Glycerol dehydrogenase; 23.2 2.8E+02 0.0097 25.2 8.4 91 23-139 22-120 (370)
459 3sju_A Keto reductase; short-c 23.1 80 0.0027 27.5 4.4 35 5-42 24-58 (279)
460 3dkr_A Esterase D; alpha beta 23.1 87 0.003 25.7 4.6 36 5-40 22-57 (251)
461 2jk1_A HUPR, hydrogenase trans 23.1 1.9E+02 0.0067 21.2 6.3 53 365-423 71-124 (139)
462 3uk7_A Class I glutamine amido 23.1 1.1E+02 0.0039 28.2 5.7 40 1-41 9-48 (396)
463 3l6d_A Putative oxidoreductase 23.1 37 0.0013 30.3 2.2 33 4-41 9-41 (306)
464 3r6d_A NAD-dependent epimerase 23.0 1E+02 0.0035 25.4 4.9 35 5-42 5-40 (221)
465 4fs3_A Enoyl-[acyl-carrier-pro 23.0 1.1E+02 0.0036 26.3 5.1 38 4-42 5-42 (256)
466 3qiv_A Short-chain dehydrogena 22.9 1E+02 0.0036 26.1 5.1 36 4-42 8-43 (253)
467 3hr8_A Protein RECA; alpha and 22.9 1.8E+02 0.006 26.6 6.7 37 7-43 64-100 (356)
468 3c24_A Putative oxidoreductase 22.8 72 0.0025 27.9 4.0 32 5-41 12-44 (286)
469 3cg0_A Response regulator rece 22.7 97 0.0033 22.9 4.4 34 107-140 53-93 (140)
470 3kkj_A Amine oxidase, flavin-c 22.7 44 0.0015 28.3 2.6 30 6-40 4-33 (336)
471 1fjh_A 3alpha-hydroxysteroid d 22.6 1E+02 0.0034 26.2 5.0 32 6-40 2-33 (257)
472 1mb3_A Cell division response 22.6 91 0.0031 22.4 4.1 32 107-138 44-84 (124)
473 3cfy_A Putative LUXO repressor 22.6 1E+02 0.0034 22.9 4.5 33 107-139 47-86 (137)
474 2vrn_A Protease I, DR1199; cys 22.5 2.1E+02 0.0072 22.9 6.7 38 4-42 9-46 (190)
475 4ao6_A Esterase; hydrolase, th 22.5 86 0.0029 26.7 4.5 39 5-43 56-96 (259)
476 3kcn_A Adenylate cyclase homol 22.5 1.7E+02 0.0057 22.0 5.8 64 364-433 74-139 (151)
477 2xzm_B RPS0E; ribosome, transl 22.5 49 0.0017 28.3 2.7 33 107-139 113-147 (241)
478 1zcz_A Bifunctional purine bio 22.5 25 0.00085 33.0 0.9 108 5-139 13-129 (464)
479 3o26_A Salutaridine reductase; 22.4 87 0.003 27.4 4.6 35 5-42 12-46 (311)
480 3u9l_A 3-oxoacyl-[acyl-carrier 22.4 88 0.003 28.0 4.6 34 4-40 4-37 (324)
481 2r79_A Periplasmic binding pro 22.4 78 0.0027 27.6 4.2 30 107-136 58-89 (283)
482 2x4g_A Nucleoside-diphosphate- 22.2 90 0.0031 27.8 4.7 35 4-42 13-47 (342)
483 4e5v_A Putative THUA-like prot 22.2 1.1E+02 0.0036 27.0 4.9 38 3-41 3-43 (281)
484 3c96_A Flavin-containing monoo 22.2 51 0.0018 30.6 3.1 36 1-41 1-37 (410)
485 4e3z_A Putative oxidoreductase 22.1 1.3E+02 0.0044 25.9 5.5 34 5-41 26-59 (272)
486 1jbe_A Chemotaxis protein CHEY 22.1 1.3E+02 0.0043 21.7 4.9 41 96-139 40-89 (128)
487 3pxx_A Carveol dehydrogenase; 22.1 1.1E+02 0.0037 26.6 5.1 34 5-41 10-43 (287)
488 3c1o_A Eugenol synthase; pheny 22.1 67 0.0023 28.5 3.8 35 4-42 4-38 (321)
489 3cz5_A Two-component response 22.0 1.4E+02 0.0049 22.4 5.4 33 107-139 50-89 (153)
490 1meo_A Phosophoribosylglycinam 22.0 1.3E+02 0.0044 25.0 5.2 45 93-137 13-58 (209)
491 3f8d_A Thioredoxin reductase ( 21.9 51 0.0017 29.1 2.9 32 5-41 16-47 (323)
492 4hkt_A Inositol 2-dehydrogenas 21.9 1.4E+02 0.0048 26.7 5.9 106 272-396 6-120 (331)
493 3lte_A Response regulator; str 21.9 1.4E+02 0.0047 21.7 5.1 21 107-127 49-71 (132)
494 3end_A Light-independent proto 21.9 88 0.003 27.6 4.5 39 4-42 40-79 (307)
495 3e8x_A Putative NAD-dependent 21.8 1.5E+02 0.0052 24.6 5.9 36 4-43 21-56 (236)
496 3bzy_A ESCU; auto cleavage pro 21.7 1.6E+02 0.0053 18.5 4.5 34 401-434 5-38 (54)
497 3imf_A Short chain dehydrogena 21.7 1E+02 0.0035 26.3 4.8 35 5-42 6-40 (257)
498 1n2z_A Vitamin B12 transport p 21.7 79 0.0027 26.8 4.0 31 107-137 56-88 (245)
499 2wtm_A EST1E; hydrolase; 1.60A 21.7 1.3E+02 0.0044 25.1 5.4 36 6-41 28-65 (251)
500 3v2h_A D-beta-hydroxybutyrate 21.6 98 0.0034 26.9 4.7 33 5-40 25-57 (281)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.6e-70 Score=531.42 Aligned_cols=430 Identities=25% Similarity=0.455 Sum_probs=353.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCC-CCCHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHG--VKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGD-RNDLG 80 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~-~~~~~ 80 (462)
+.||+++|+|++||++|+++||+.|+++| +.|||++++.+...+.+... ...++++|..+|++++.+.. ..+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecCCCCCCCccccCChH
Confidence 67999999999999999999999999999 99999999766655533210 11357999999999887642 23334
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcC-CCcC
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDD-GIVD 159 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~~ 159 (462)
..+..+.+.+.+.+++.++.+....+.++||||+|.+++|+..+|+++|||++.|++++++.+..+++++..... +...
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~ 169 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE 169 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCc
Confidence 445555555556667766664331126899999999999999999999999999999999999998887765543 1110
Q ss_pred CCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhh----hccCCCcc
Q 044266 160 DNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGA----LDLIPEFL 235 (462)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~p~v~ 235 (462)
. .....+..+||++.+...++++ ++.. ..+..+.+.+.+..+...+++.+++||+++||++. ++..|+++
T Consensus 170 ~----~~~~~~~~iPg~p~~~~~dlp~-~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~ 243 (454)
T 3hbf_A 170 V----HDVKSIDVLPGFPELKASDLPE-GVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLL 243 (454)
T ss_dssp H----TTSSCBCCSTTSCCBCGGGSCT-TSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEE
T ss_pred c----ccccccccCCCCCCcChhhCch-hhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEE
Confidence 0 0112344689999999899884 3332 33344666777777788899999999999999863 34568999
Q ss_pred ccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCccc
Q 044266 236 PIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAI 315 (462)
Q Consensus 236 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~ 315 (462)
+|||++...... .+..++++.+|++.++++++|||||||+.....+.+.+++.+++..+++|||+++.. ..
T Consensus 244 ~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~ 314 (454)
T 3hbf_A 244 NVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PK 314 (454)
T ss_dssp ECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HH
T ss_pred EECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----ch
Confidence 999998643321 124567899999998889999999999998889999999999999999999999875 44
Q ss_pred ccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEe
Q 044266 316 DAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRF 395 (462)
Q Consensus 316 ~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~ 395 (462)
..+|++|.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|++.||+.||+++++.+|+|+.+
T Consensus 315 ~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l 394 (454)
T 3hbf_A 315 EKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGV 394 (454)
T ss_dssp HHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEEC
T ss_pred hcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEe
Confidence 56889999899999999999999999999999999999999999999999999999999999999999999856999999
Q ss_pred ecCCCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHH
Q 044266 396 NKNKNGIITREEIMKKVDQVLEDE---NFKARALDLKETSLNSVREGGQSDKTFKNFVQWIK 454 (462)
Q Consensus 396 ~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 454 (462)
.. ..+++++|+++|+++|+|+ +||+||+++++++++++++||+|.+++++|++++.
T Consensus 395 ~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 395 DN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp GG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred cC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 74 5799999999999999987 79999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.8e-66 Score=514.13 Aligned_cols=447 Identities=33% Similarity=0.667 Sum_probs=340.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCC-CCCCCeEEEEcCCCCCCC----CCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNN-YIGDQIKLVSIPDGMEPE----GDRN 77 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~-~~~~~i~~~~i~~~~~~~----~~~~ 77 (462)
+++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+...... ...++++|+.++++++.. ....
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~ 86 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQ 86 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------C
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcch
Confidence 45799999999999999999999999999999999999987766544310000 001389999999877652 1123
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhc-cCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCC
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRL-ENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDG 156 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 156 (462)
+...++..+.+.+.+.++++++.++.. .+.++||||+|.++.|+..+|+++|||++.++++++.....+.++|.+...+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 166 (482)
T 2pq6_A 87 DVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERG 166 (482)
T ss_dssp CHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcC
Confidence 455556666577888899999987641 0158999999999999999999999999999999988777776666555555
Q ss_pred CcCCCCCC--cc---ccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhh----
Q 044266 157 IVDDNGTP--VK---QQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGA---- 227 (462)
Q Consensus 157 ~~~~~~~~--~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~---- 227 (462)
+.+..... .. ......+|+++.+...+++ .++..........+.+....+...+++.+++||+++||++.
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~ 245 (482)
T 2pq6_A 167 IIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245 (482)
T ss_dssp CSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred CCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHH
Confidence 54422110 00 1112245666655555555 33332222334445555556667889999999999999863
Q ss_pred hccCCCccccCcccCC-CCCC------CCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCC
Q 044266 228 LDLIPEFLPIGPLLSS-NRLG------NSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNR 300 (462)
Q Consensus 228 ~~~~p~v~~vGp~~~~-~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 300 (462)
++..+++++|||++.. .... ......|+.+.++.+|++.++++++|||||||......+.+.+++.+|+..+.
T Consensus 246 ~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~ 325 (482)
T 2pq6_A 246 SSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKK 325 (482)
T ss_dssp HTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCC
Confidence 3434899999999763 1110 00012235567899999998888999999999987788889999999999999
Q ss_pred CEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhh
Q 044266 301 PFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFL 380 (462)
Q Consensus 301 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~ 380 (462)
+|||+++.....+....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.
T Consensus 326 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~ 405 (482)
T 2pq6_A 326 SFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPT 405 (482)
T ss_dssp EEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred cEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHH
Confidence 99999975421111234788888888999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHH
Q 044266 381 NESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDE---NFKARALDLKETSLNSVREGGQSDKTFKNFVQWIK 454 (462)
Q Consensus 381 na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 454 (462)
||+++++.+|+|+.+. ..+++++|.++|+++|+|+ +||+||+++++++++++.+||+|.+++++|++++.
T Consensus 406 na~~~~~~~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 406 DCRFICNEWEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHTSCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9999973269999995 4589999999999999998 69999999999999999999999999999999874
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.6e-63 Score=489.93 Aligned_cols=436 Identities=29% Similarity=0.509 Sum_probs=330.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCCc--chHHHHHhhcCCCCCCCCeEEEEcCCCCCCC-CCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH-GVKVTFLNTDY--NHKRVVNALGQNNYIGDQIKLVSIPDGMEPE-GDRND 78 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~-~~~~~ 78 (462)
+++||+++|+|++||++|+++||++|++| ||+|||++++. +...+.+... ....+++|+.++.+.... ....+
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~ 81 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTR 81 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCC
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchh
Confidence 35799999999999999999999999998 99999999987 3444444210 002489999998653221 11223
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhhccCCCc-eEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCCC
Q 044266 79 LGMLTKTMVRVMPEKLEELIENINRLENEKI-TCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDGI 157 (462)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 157 (462)
....+......+.+.++++++.+.. +.++ ||||+|.++.|+..+|+++|||++.++++++.....++++|.......
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVS 159 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCC
Confidence 4443434445667778888887642 1578 999999999999999999999999999999888877777665432211
Q ss_pred cCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhc-------c
Q 044266 158 VDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALD-------L 230 (462)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~-------~ 230 (462)
.+ ..+. .....+|+++++...+++.. +.... . .....+.......++++.+++|++.++|.+... .
T Consensus 160 ~~---~~~~-~~~~~~Pg~~p~~~~~l~~~-~~~~~-~-~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~ 232 (480)
T 2vch_A 160 CE---FREL-TEPLMLPGCVPVAGKDFLDP-AQDRK-D-DAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLD 232 (480)
T ss_dssp SC---GGGC-SSCBCCTTCCCBCGGGSCGG-GSCTT-S-HHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTT
T ss_pred Cc---cccc-CCcccCCCCCCCChHHCchh-hhcCC-c-hHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccC
Confidence 10 0000 11224677777666666633 22211 1 233344444555677888999999999975321 1
Q ss_pred CCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 044266 231 IPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDI 310 (462)
Q Consensus 231 ~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 310 (462)
.+++++|||+....... ..+..+.++.+|++.++++++|||||||+.....+.+.+++.+++..+++|||+++...
T Consensus 233 ~~~v~~vGpl~~~~~~~----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~ 308 (480)
T 2vch_A 233 KPPVYPVGPLVNIGKQE----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPS 308 (480)
T ss_dssp CCCEEECCCCCCCSCSC----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CCcEEEEeccccccccc----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcc
Confidence 37899999998643211 00235678999999988889999999999888889999999999999999999998652
Q ss_pred CC-----------cc-cccCchhHHHHhcCCceee-cccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccc
Q 044266 311 TN-----------DA-IDAYPEGFQDRVATRRQMV-GWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFAD 377 (462)
Q Consensus 311 ~~-----------~~-~~~~~~~~~~~~~~~v~~~-~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~D 377 (462)
.. .. ...+|+++.++..++.+++ +|+||.+||+|++|++||||||+||++||+++|||||++|++.|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~D 388 (480)
T 2vch_A 309 GIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAE 388 (480)
T ss_dssp SSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred ccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccccc
Confidence 11 01 1357888888887776666 59999999999999999999999999999999999999999999
Q ss_pred hhhhHHhH-hhhheeeEEeecCCCCccCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHH
Q 044266 378 QFLNESYI-CDIWKVGLRFNKNKNGIITREEIMKKVDQVLE---DENFKARALDLKETSLNSVREGGQSDKTFKNFVQWI 453 (462)
Q Consensus 378 Q~~na~~v-~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 453 (462)
|+.||+++ ++ +|+|+.+..+++..+++++|+++|+++|+ +++||+||+++++++++++.+||+|.+++++|++++
T Consensus 389 Q~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~ 467 (480)
T 2vch_A 389 QKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKW 467 (480)
T ss_dssp HHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred chHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999997 56 79999997522236999999999999998 678999999999999999999999999999999998
Q ss_pred Hh
Q 044266 454 KA 455 (462)
Q Consensus 454 ~~ 455 (462)
..
T Consensus 468 ~~ 469 (480)
T 2vch_A 468 KA 469 (480)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-63 Score=488.25 Aligned_cols=437 Identities=26% Similarity=0.469 Sum_probs=331.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCC--EEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCC-CCCH
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGV--KVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGD-RNDL 79 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~-~~~~ 79 (462)
++.||+++|+|++||++|+++||+.|++||| .|||++++.+...+.+.... ...++++|+.++++++.... ....
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCCh
Confidence 4679999999999999999999999999865 56888887554443322100 01248999999988776531 1233
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcC-CCc
Q 044266 80 GMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDD-GIV 158 (462)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~ 158 (462)
...+..+.+.+...++++++.+.+..+.+|||||+|.++.|+..+|+++|||++.++++++..+..+.+.+..... +..
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 3444445555555666666654321126999999999999999999999999999999988777665554432211 111
Q ss_pred CCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhh----hccCCCc
Q 044266 159 DDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGA----LDLIPEF 234 (462)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~----~~~~p~v 234 (462)
+. ..........+|+++.+...+++. .+........+.+.+.+..+..++++.+++||++++|++. ++..|++
T Consensus 164 ~~--~~~~~~~~~~~pg~~~~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~ 240 (456)
T 2c1x_A 164 GI--QGREDELLNFIPGMSKVRFRDLQE-GIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTY 240 (456)
T ss_dssp CC--TTCTTCBCTTSTTCTTCBGGGSCT-TTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCE
T ss_pred cc--ccccccccccCCCCCcccHHhCch-hhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCE
Confidence 10 001112233578887766666663 2222222233444444555566789999999999999863 3445899
Q ss_pred cccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcc
Q 044266 235 LPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDA 314 (462)
Q Consensus 235 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~ 314 (462)
++|||+....... .++.+.++.+|++.++++++|||||||......+.+.+++.+++..+.+|||+++.. .
T Consensus 241 ~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~ 311 (456)
T 2c1x_A 241 LNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----A 311 (456)
T ss_dssp EECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----G
T ss_pred EEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----c
Confidence 9999997643211 134456799999998888999999999988788889999999999999999999765 3
Q ss_pred cccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEE
Q 044266 315 IDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLR 394 (462)
Q Consensus 315 ~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~ 394 (462)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||+|+.
T Consensus 312 ~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~ 391 (456)
T 2c1x_A 312 RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVR 391 (456)
T ss_dssp GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEE
T ss_pred hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEE
Confidence 34578888888889999999999999999999999999999999999999999999999999999999999994599999
Q ss_pred eecCCCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHHhh
Q 044266 395 FNKNKNGIITREEIMKKVDQVLEDE---NFKARALDLKETSLNSVREGGQSDKTFKNFVQWIKAE 456 (462)
Q Consensus 395 ~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 456 (462)
+.. ..+++++|+++|+++|+|+ +||+||+++++.+++++.+||+|.+++++|++++...
T Consensus 392 l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 392 IEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp CGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred ecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 963 5689999999999999997 8999999999999999999999999999999998653
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3e-61 Score=474.45 Aligned_cols=429 Identities=27% Similarity=0.485 Sum_probs=329.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcch-----HHHHHhhcCCCCCCCCeEEEEcCCCC-CCCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNH-----KRVVNALGQNNYIGDQIKLVSIPDGM-EPEGD 75 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~i~~~~i~~~~-~~~~~ 75 (462)
+.||+++|+|++||++|+++||+.|++| ||+|||++++.+. +.+.+.. ...++++|+.+|++. +..+.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCcccc
Confidence 5699999999999999999999999999 9999999998753 3333311 012489999999763 32110
Q ss_pred CCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcC
Q 044266 76 RNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDD 155 (462)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 155 (462)
..+....+......+.+.++++++.+.. .+||+||+|.++.|+..+|+++|||++.++++++.....++++|.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhccC---CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 1122111333345667778888887632 7999999999999999999999999999999999887777776654311
Q ss_pred CCcCCCCCCcccc--ccccCCCC-cccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhcc--
Q 044266 156 GIVDDNGTPVKQQ--MIQLAPTM-AAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALDL-- 230 (462)
Q Consensus 156 ~~~~~~~~~~~~~--~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~-- 230 (462)
+. +..... ....+|++ +++...+++..+. .. .. ....+....+..++++.+++||++++|++...+
T Consensus 162 ~~-----~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~-~~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~ 232 (463)
T 2acv_A 162 EV-----FDDSDRDHQLLNIPGISNQVPSNVLPDACF-NK--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALY 232 (463)
T ss_dssp CC-----CCCSSGGGCEECCTTCSSCEEGGGSCHHHH-CT--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHH
T ss_pred CC-----CCCccccCceeECCCCCCCCChHHCchhhc-CC--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHH
Confidence 00 111010 02356787 6666666663332 22 11 344444555566788899999999999764322
Q ss_pred -----CCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCcc-ccCHHHHHHHHHHHHhCCCCEEE
Q 044266 231 -----IPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFT-VFDKEQFQELASGLELTNRPFLW 304 (462)
Q Consensus 231 -----~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~ 304 (462)
.+++++|||+......... ...|..+.++.+|++.++++++|||+|||+. ....+.+.+++.+++..+++|||
T Consensus 233 ~~~~p~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 233 DHDEKIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp HHCTTSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hccccCCcEEEeCCCccccccccc-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 5789999999864320000 0001235678999999888899999999998 77888899999999999999999
Q ss_pred EEcCCCCCcccccCchhHHHHh--cCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhH
Q 044266 305 VVRPDITNDAIDAYPEGFQDRV--ATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNE 382 (462)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na 382 (462)
+++.+ ...+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||
T Consensus 312 ~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na 386 (463)
T 2acv_A 312 SNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNA 386 (463)
T ss_dssp ECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHH
T ss_pred EECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHH
Confidence 99753 123678887777 88999999999999999999999999999999999999999999999999999999
Q ss_pred HhH-hhhheeeEEe-ecCCCC--ccCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHHh
Q 044266 383 SYI-CDIWKVGLRF-NKNKNG--IITREEIMKKVDQVLE-DENFKARALDLKETSLNSVREGGQSDKTFKNFVQWIKA 455 (462)
Q Consensus 383 ~~v-~~~~g~g~~~-~~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 455 (462)
+++ ++ +|+|+.+ ...+.. .+++++|.++|+++|+ +++||+||+++++++++++.+||+|.+++++|++++.+
T Consensus 387 ~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 463 (463)
T 2acv_A 387 FRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 463 (463)
T ss_dssp HHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhcC
Confidence 995 77 6999999 311124 6899999999999997 47999999999999999999999999999999999853
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.1e-47 Score=374.57 Aligned_cols=381 Identities=20% Similarity=0.226 Sum_probs=269.0
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCC-----CC
Q 044266 2 LRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEG-----DR 76 (462)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~-----~~ 76 (462)
++++||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|+.++.+++... ..
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 4568999999999999999999999999999999999999998888877 899999987654321 12
Q ss_pred CCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCC
Q 044266 77 NDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDG 156 (462)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 156 (462)
.+....+..+.+.+...+.++.+.++. .+||+||+|.+.+|+..+|+++|||++.+++.+....... ..+.....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-ccccccccc
Confidence 243444444444444445555555555 8999999999888999999999999999987764211110 000000000
Q ss_pred CcCCCC---CCccccc-cccCCCCcccCcccchhhhhcCCCcchhhHHHHHH------hhhhhccccEEEEcCccccchh
Q 044266 157 IVDDNG---TPVKQQM-IQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTID------NNETIKKAERLICNSTYDLEPG 226 (462)
Q Consensus 157 ~~~~~~---~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~ns~~~le~~ 226 (462)
..+... .+..... .......+. . ..+ .+.+.+...+ .......++.+++++++.++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 157 TADRGEEAAAPAGTGDAEEGAEAEDG-----L--VRF-----FTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp CC---------------------HHH-----H--HHH-----HHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred ccccccccccccccccchhhhccchh-----H--HHH-----HHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 000000 0000000 000000000 0 000 0000011100 0111225678999999999987
Q ss_pred hhccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEE
Q 044266 227 ALDLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVV 306 (462)
Q Consensus 227 ~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~ 306 (462)
..++.+++++|||+...... ..+|++..+++++|||++||......+.+..++++++..+.+++|.+
T Consensus 225 ~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~ 291 (424)
T 2iya_A 225 GDTVGDNYTFVGPTYGDRSH-------------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSV 291 (424)
T ss_dssp GGGCCTTEEECCCCCCCCGG-------------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEEC
T ss_pred ccCCCCCEEEeCCCCCCccc-------------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEE
Confidence 55677899999997642210 12455545567899999999986567788899999988888998888
Q ss_pred cCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHh
Q 044266 307 RPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYIC 386 (462)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~ 386 (462)
+.+.+. +.+ +..++|+++.+|+||.++|+|+++ ||||||+||++||+++|+|+|++|.+.||..||++++
T Consensus 292 g~~~~~-------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 361 (424)
T 2iya_A 292 GRFVDP-------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIV 361 (424)
T ss_dssp CTTSCG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred CCcCCh-------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHH
Confidence 754211 111 124678999999999999999887 9999999999999999999999999999999999999
Q ss_pred hhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 387 DIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 387 ~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
+ +|+|+.+.. ..+++++|.++|+++|+|++++++++++++++++
T Consensus 362 ~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 362 E-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE 405 (424)
T ss_dssp H-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred H-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 8 699999964 5689999999999999999999999999999986
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=6.4e-46 Score=361.51 Aligned_cols=358 Identities=14% Similarity=0.171 Sum_probs=234.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCC-------C-
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPE-------G- 74 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~-------~- 74 (462)
++|||||+++|+.||++|+++||++|++|||+|||++++.+.+.. +. ++.+..+..+.... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~---------g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EA---------GLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TT---------TCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hc---------CCeeEecCCchhHhhhccccccc
Confidence 468999999999999999999999999999999999998876643 33 78888876433211 0
Q ss_pred -------CCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHH
Q 044266 75 -------DRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSF 147 (462)
Q Consensus 75 -------~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 147 (462)
...........+.......+.++++.++. .+||+||+|.+++++..+|+.+|||++.+...+........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 00111222223333334445556666665 89999999999999999999999999987655432111100
Q ss_pred hHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhh-hhhccccEEEEcCccccch-
Q 044266 148 SVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNN-ETIKKAERLICNSTYDLEP- 225 (462)
Q Consensus 148 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~~le~- 225 (462)
.... +.+...+.+.. .........+....+....
T Consensus 168 ~~~~--------------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (400)
T 4amg_A 168 ALIR--------------------------------------------RAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL 203 (400)
T ss_dssp HHHH--------------------------------------------HHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT
T ss_pred hHHH--------------------------------------------HHHHHHHHHhCCCcccccchhhcccCchhhcc
Confidence 0000 00000000000 0001111222222111110
Q ss_pred -hhhccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccC--HHHHHHHHHHHHhCCCCE
Q 044266 226 -GALDLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFD--KEQFQELASGLELTNRPF 302 (462)
Q Consensus 226 -~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~~~~~ 302 (462)
+.....+......+... .....+.+|++..+++++|||||||+.... .+.+..++++++..+.++
T Consensus 204 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~ 271 (400)
T 4amg_A 204 LPEDRRSPGAWPMRYVPY------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEF 271 (400)
T ss_dssp SCGGGCCTTCEECCCCCC------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEE
T ss_pred CcccccCCcccCcccccc------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceE
Confidence 00011111221211111 112223367887788999999999985543 356888999999999999
Q ss_pred EEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhH
Q 044266 303 LWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNE 382 (462)
Q Consensus 303 i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na 382 (462)
+|..++.. ..... ..++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||
T Consensus 272 v~~~~~~~----~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na 340 (400)
T 4amg_A 272 VLTLGGGD----LALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNR 340 (400)
T ss_dssp EEECCTTC----CCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHH
T ss_pred EEEecCcc----ccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHH
Confidence 99887651 11111 24688999999999999999887 999999999999999999999999999999999
Q ss_pred HhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHH
Q 044266 383 SYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLNSVREGGQSDKTFKNFVQWI 453 (462)
Q Consensus 383 ~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 453 (462)
+++++ +|+|+.++. .+.++ ++|+++|+|++||+||+++++++++. . +..++.+.++.+
T Consensus 341 ~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~---~--~~~~~a~~le~l 398 (400)
T 4amg_A 341 DVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREAALRVRQEMSEM---P--PPAETAAXLVAL 398 (400)
T ss_dssp HHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS---C--CHHHHHHHHHHH
T ss_pred HHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC---C--CHHHHHHHHHHh
Confidence 99999 599999974 44554 56788999999999999999999974 3 334445555544
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.6e-44 Score=352.84 Aligned_cols=366 Identities=14% Similarity=0.113 Sum_probs=249.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCC--CCCCCHHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPE--GDRNDLGML 82 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~--~~~~~~~~~ 82 (462)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|+.++...... .........
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 4999999999999999999999999999999999999887777766 89999988653211 001111111
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCC-Ccch--HHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCCCcC
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADG-SMGW--VMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDGIVD 159 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (462)
+..+ +.....++++.+.... .+||+||+|. +.+| +..+|+++|||++.+.+.+.... ..+.+
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-----------~~~~p 136 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------SPYYP 136 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSC
T ss_pred HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-----------CcccC
Confidence 2111 2222333444433211 7999999997 5668 89999999999999987764310 00001
Q ss_pred CCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHh------------hhhhccccEEEEcCccccch-h
Q 044266 160 DNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDN------------NETIKKAERLICNSTYDLEP-G 226 (462)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~ns~~~le~-~ 226 (462)
.... .. .+++ ......+.+.+. .......+...+... .+..... .+++|+++.+++ +
T Consensus 137 ~~~~-----~~-~~~~--~~~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~ 206 (415)
T 1iir_A 137 PPPL-----GE-PSTQ--DTIDIPAQWERN-NQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ 206 (415)
T ss_dssp CCC-----------------CHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC
T ss_pred CccC-----Cc-cccc--hHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC
Confidence 0000 00 0000 000000000000 000000000000000 1111233 689999999987 5
Q ss_pred hhccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEE
Q 044266 227 ALDLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVV 306 (462)
Q Consensus 227 ~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~ 306 (462)
.+.. ++++|||+..... +..+.++.+|++.. +++|||++||.. ...+..+.++++++..+.+++|++
T Consensus 207 -~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~ 273 (415)
T 1iir_A 207 -PTDL-DAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSR 273 (415)
T ss_dssp -CCSS-CCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECT
T ss_pred -cccC-CeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEe
Confidence 3323 8999999986432 24567889999765 469999999987 567788889999999999999988
Q ss_pred cCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHh
Q 044266 307 RPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYIC 386 (462)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~ 386 (462)
+.+.. . . ...++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|.+.||..||++++
T Consensus 274 g~~~~----~-~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 341 (415)
T 1iir_A 274 GWADL----V-L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVA 341 (415)
T ss_dssp TCTTC----C-C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred CCCcc----c-c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHH
Confidence 75411 1 1 123568899999999999977666 9999999999999999999999999999999999999
Q ss_pred hhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 387 DIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 387 ~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
+ +|+|+.++. ..+++++|.++|+++ +|++++++++++++++++
T Consensus 342 ~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 342 E-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT 384 (415)
T ss_dssp H-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS
T ss_pred H-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh
Confidence 8 599999864 568999999999999 999999999999998864
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.9e-44 Score=347.47 Aligned_cols=365 Identities=15% Similarity=0.083 Sum_probs=254.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCC---CCCCHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEG---DRNDLGM 81 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~---~~~~~~~ 81 (462)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|+.++....... .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 4999999999999999999999999999999999999888888877 899999886532110 0111111
Q ss_pred HHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCC-Ccch--HHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCCCc
Q 044266 82 LTKTMVRVMPEKLEELIENINRLENEKITCVVADG-SMGW--VMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDGIV 158 (462)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (462)
.+..+. .....++++.+.... .+||+||+|. ..++ +..+|+.+|||++.+.+.+.+. .....
T Consensus 72 ~~~~~~---~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~-----------~~~~~ 136 (416)
T 1rrv_A 72 EEQRLA---AMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL-----------ASPHL 136 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSS
T ss_pred HHHHHH---HHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----------CCccc
Confidence 122221 122344444444211 7999999996 3556 8899999999999987765331 00000
Q ss_pred CCCCCCccccccccC-CC-CcccCcccchhhhhc---CCCcchhhHHHHHH--------hhhhhccccEEEEcCccccch
Q 044266 159 DDNGTPVKQQMIQLA-PT-MAAIHSSKLVWACIG---DFNTQKIVFDFTID--------NNETIKKAERLICNSTYDLEP 225 (462)
Q Consensus 159 ~~~~~~~~~~~~~~~-p~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~~~~~~~l~ns~~~le~ 225 (462)
+ +.. .. .. ++ ... .+.+.+.. .............. ..+..... .+++|+++.+++
T Consensus 137 p----~~~--~~-~~~~~r~~n----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~ 204 (416)
T 1rrv_A 137 P----PAY--DE-PTTPGVTDI----RVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAP 204 (416)
T ss_dssp C----CCB--CS-CCCTTCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSC
T ss_pred C----CCC--CC-CCCchHHHH----HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccC
Confidence 0 000 00 00 01 000 00000000 00000000000000 01112233 789999999987
Q ss_pred hhhccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccc-cCHHHHHHHHHHHHhCCCCEEE
Q 044266 226 GALDLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTV-FDKEQFQELASGLELTNRPFLW 304 (462)
Q Consensus 226 ~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~ 304 (462)
+...+ ++++|||+..... +..+.++.+|++.+ +++|||++||... ...+.+..++++++..+.+++|
T Consensus 205 ~~~~~--~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~ 272 (416)
T 1rrv_A 205 LQPDV--DAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVIL 272 (416)
T ss_dssp CCSSC--CCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCC--CeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEE
Confidence 63222 8999999986532 24567889999765 4699999999854 3456688899999999999999
Q ss_pred EEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHh
Q 044266 305 VVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESY 384 (462)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~ 384 (462)
+++... .. . +..++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|.+.||..||++
T Consensus 273 ~~g~~~----~~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 340 (416)
T 1rrv_A 273 SRGWTE----LV-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGR 340 (416)
T ss_dssp ECTTTT----CC-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHH
T ss_pred EeCCcc----cc-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHH
Confidence 987651 11 1 124678999999999999977666 99999999999999999999999999999999999
Q ss_pred HhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 385 ICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 385 v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
+++ .|+|+.++. ..+++++|.++|+++ +|++++++++++++++++
T Consensus 341 l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 341 VAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT 385 (416)
T ss_dssp HHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC
T ss_pred HHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh
Confidence 999 599999864 568999999999999 999999999999988875
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.6e-42 Score=339.21 Aligned_cols=368 Identities=15% Similarity=0.182 Sum_probs=261.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCC-----CC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGD-----RN 77 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~-----~~ 77 (462)
+++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|..++..++.... ..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhccc
Confidence 468999999999999999999999999999999999999998888876 8999999865543210 11
Q ss_pred CHHHHHHH-HHHhccHHHHHHHHHHhhccCCCceEEEeC-CCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcC
Q 044266 78 DLGMLTKT-MVRVMPEKLEELIENINRLENEKITCVVAD-GSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDD 155 (462)
Q Consensus 78 ~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 155 (462)
+....+.. +.......+.++.+.+++ ++||+||+| ...+++..+|+++|||++.+.+........ ...+....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~~- 164 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHY-SFSQDMVT- 164 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSC-CHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcc-cccccccc-
Confidence 11122222 333334445566666666 999999999 777789999999999999987544210000 00000000
Q ss_pred CCcCCCCCCccccccccCCCCcc-cC--cccchhhhhcCCCcchhhHHHHHHhhhhhcc-ccEEEEcCccccchhhhccC
Q 044266 156 GIVDDNGTPVKQQMIQLAPTMAA-IH--SSKLVWACIGDFNTQKIVFDFTIDNNETIKK-AERLICNSTYDLEPGALDLI 231 (462)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~p~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ns~~~le~~~~~~~ 231 (462)
......+. +. ...+. ........... ....... .+..++...+.++++...+.
T Consensus 165 ---------------~~~~~~p~~~~~~~~~~~-~~~~~~g~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 221 (415)
T 3rsc_A 165 ---------------LAGTIDPLDLPVFRDTLR-DLLAEHGLSRS-------VVDCWNHVEQLNLVFVPKAFQIAGDTFD 221 (415)
T ss_dssp ---------------HHTCCCGGGCHHHHHHHH-HHHHHTTCCCC-------HHHHHTCCCSEEEESSCTTTSTTGGGCC
T ss_pred ---------------ccccCChhhHHHHHHHHH-HHHHHcCCCCC-------hhhhhcCCCCeEEEEcCcccCCCcccCC
Confidence 00000000 00 00000 00000000000 0011122 27788888898987755567
Q ss_pred CCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCC
Q 044266 232 PEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDIT 311 (462)
Q Consensus 232 p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 311 (462)
.++.++||....... ...|....+++++||+++||......+.+..++++++..+.+++|.++.+.+
T Consensus 222 ~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~ 288 (415)
T 3rsc_A 222 DRFVFVGPCFDDRRF-------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVD 288 (415)
T ss_dssp TTEEECCCCCCCCGG-------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSC
T ss_pred CceEEeCCCCCCccc-------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCC
Confidence 789999997653221 1134433456789999999997767778899999998888889988875421
Q ss_pred CcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhhee
Q 044266 312 NDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKV 391 (462)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~ 391 (462)
. +.+ +..++|+++.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++++ .|+
T Consensus 289 ~-------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g~ 357 (415)
T 3rsc_A 289 P-------AAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGL 357 (415)
T ss_dssp G-------GGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HTC
T ss_pred h-------HHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cCC
Confidence 1 111 124678999999999999999877 99999999999999999999999999999999999999 599
Q ss_pred eEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 392 GLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 392 g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
|+.+.. .+++++.|.++|+++|+|++++++++++++++.+
T Consensus 358 g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 358 GAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR 397 (415)
T ss_dssp EEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred EEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 999974 5689999999999999999999999999999987
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=6e-42 Score=333.67 Aligned_cols=369 Identities=18% Similarity=0.205 Sum_probs=261.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCC-----CCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEG-----DRND 78 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~-----~~~~ 78 (462)
++||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... |++|..++..++... ...+
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccccc
Confidence 56999999999999999999999999999999999998888888776 899999885433221 2234
Q ss_pred HHHHHHH-HHHhccHHHHHHHHHHhhccCCCceEEEeC-CCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCC
Q 044266 79 LGMLTKT-MVRVMPEKLEELIENINRLENEKITCVVAD-GSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDG 156 (462)
Q Consensus 79 ~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 156 (462)
....+.. +.......+.++.+.+++ ++||+||+| ...+++..+|+++|||++.+.+........ ...+......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~~~~ 150 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKELWKSN 150 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-cccccccccc
Confidence 4444444 444444455666666666 999999999 777789999999999999986544310000 0000000000
Q ss_pred CcCCCCCCccccccccCC-CCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccc-cEEEEcCccccchhhhccCCCc
Q 044266 157 IVDDNGTPVKQQMIQLAP-TMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKA-ERLICNSTYDLEPGALDLIPEF 234 (462)
Q Consensus 157 ~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ns~~~le~~~~~~~p~v 234 (462)
. ...| .+..+ ...+. ............ ....... +..++...++++++...+..++
T Consensus 151 ~-------------~~~~~~~~~~-~~~~~-~~~~~~g~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 208 (402)
T 3ia7_A 151 G-------------QRHPADVEAV-HSVLV-DLLGKYGVDTPV-------KEYWDEIEGLTIVFLPKSFQPFAETFDERF 208 (402)
T ss_dssp T-------------CCCGGGSHHH-HHHHH-HHHHTTTCCSCH-------HHHHTCCCSCEEESSCGGGSTTGGGCCTTE
T ss_pred c-------------ccChhhHHHH-HHHHH-HHHHHcCCCCCh-------hhhhcCCCCeEEEEcChHhCCccccCCCCe
Confidence 0 0000 00000 00000 000000000000 0111222 6778888888887645567789
Q ss_pred cccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcc
Q 044266 235 LPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDA 314 (462)
Q Consensus 235 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~ 314 (462)
.++||........ ..|....+++++||+++||......+.+..++++++..+.++++.++.+.+.
T Consensus 209 ~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-- 273 (402)
T 3ia7_A 209 AFVGPTLTGRDGQ-------------PGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP-- 273 (402)
T ss_dssp EECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG--
T ss_pred EEeCCCCCCcccC-------------CCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh--
Confidence 9999976433211 1234334567899999999977777789999999988888888887754211
Q ss_pred cccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceecccc-ccchhhhHHhHhhhheeeE
Q 044266 315 IDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPY-FADQFLNESYICDIWKVGL 393 (462)
Q Consensus 315 ~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~-~~DQ~~na~~v~~~~g~g~ 393 (462)
+.+ +..++|+++.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|. ..||..||.++++ .|+|.
T Consensus 274 -----~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~ 344 (402)
T 3ia7_A 274 -----AVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGS 344 (402)
T ss_dssp -----GGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEE
T ss_pred -----hhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEE
Confidence 111 124678999999999999999887 9999999999999999999999999 9999999999999 59999
Q ss_pred EeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 394 RFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 394 ~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
.+.. +.++++.|.++|+++|+|++++++++++++++.+
T Consensus 345 ~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 345 VLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS 382 (402)
T ss_dssp ECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred EccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 9974 5689999999999999999999999999999876
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=6.4e-42 Score=332.81 Aligned_cols=351 Identities=15% Similarity=0.125 Sum_probs=249.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCC--CCCCCHHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPE--GDRNDLGML 82 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~--~~~~~~~~~ 82 (462)
|||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+++. |+.|..++...... .........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 4899999999999999999999999999999999999998888877 89999987543211 000011111
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchH---HHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCCCcC
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWV---MEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDGIVD 159 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (462)
...+... +.+.++.+.... .+||+||+|.....+ ..+|+++|||++.+..++......
T Consensus 72 ~~~~~~~----~~~~~~~l~~~~-~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-------------- 132 (404)
T 3h4t_A 72 AEVVTEV----VAEWFDKVPAAI-EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-------------- 132 (404)
T ss_dssp GGGHHHH----HHHHHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--------------
T ss_pred HHHHHHH----HHHHHHHHHHHh-cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--------------
Confidence 1112222 222223322222 579999999765544 788999999999988766421000
Q ss_pred CCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhh-----------hhccccEEEEcCccccchhhh
Q 044266 160 DNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNE-----------TIKKAERLICNSTYDLEPGAL 228 (462)
Q Consensus 160 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~ns~~~le~~~~ 228 (462)
.+. ..+... .....+.+.+....... .....+..+.+..+.+.+. .
T Consensus 133 ---------------~~~------~~~~~~-~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~-~ 189 (404)
T 3h4t_A 133 ---------------QSQ------AERDMY-NQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-R 189 (404)
T ss_dssp ---------------SCH------HHHHHH-HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-C
T ss_pred ---------------hHH------HHHHHH-HHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-C
Confidence 000 000000 00000000000000000 0001234566777777655 5
Q ss_pred ccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 044266 229 DLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRP 308 (462)
Q Consensus 229 ~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 308 (462)
++.++++++|++..+.. ...++++.+|++.. +++|||++||+.. ..+.+..++++++..+.++||..+.
T Consensus 190 ~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 190 PTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp TTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 67789999998865432 24667888999753 5699999999876 6778889999999999999998875
Q ss_pred CCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhh
Q 044266 309 DITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDI 388 (462)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 388 (462)
.. .... ..++|+++.+|+||.++|+++++ ||||||+||++|++++|+|+|++|.+.||+.||+++++
T Consensus 259 ~~----~~~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~- 325 (404)
T 3h4t_A 259 AG----LGRI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD- 325 (404)
T ss_dssp TT----CCCS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-
T ss_pred cc----cccc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-
Confidence 41 1111 12678999999999999988776 99999999999999999999999999999999999999
Q ss_pred heeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 389 WKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 389 ~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
.|+|+.+.. ..++++.|.++|+++++ ++|+++++++++.+++
T Consensus 326 ~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 326 LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIRT 367 (404)
T ss_dssp HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC
T ss_pred CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh
Confidence 599999974 56899999999999998 9999999999988763
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.6e-41 Score=330.99 Aligned_cols=375 Identities=13% Similarity=0.122 Sum_probs=247.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCC---------
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPE--------- 73 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~--------- 73 (462)
+++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |++|+.++......
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhcc
Confidence 467999999999999999999999999999999999999888777776 89999988653100
Q ss_pred -------CC-----CC--CHH---HHHHHHHHh----c-cH-HHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCC
Q 044266 74 -------GD-----RN--DLG---MLTKTMVRV----M-PE-KLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKL 130 (462)
Q Consensus 74 -------~~-----~~--~~~---~~~~~~~~~----~-~~-~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgi 130 (462)
.. .. ... .....+... . .. .+.++++.+++ .+||+||+|..++++..+|+.+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCC
Confidence 00 00 111 111112111 1 13 56677776666 899999999988899999999999
Q ss_pred ceEEEccchhHHHHHHHhHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhh---
Q 044266 131 RRAAFWPAAAGLLALSFSVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNE--- 207 (462)
Q Consensus 131 P~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 207 (462)
|++.+...+.........++... + ..+..... ..+ .+.+.........
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~~~~--~~~----------~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLL--P---------------DQPEEHRE--DPL----------AEWLTWTLEKYGGPAF 217 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHG--G---------------GSCTTTCC--CHH----------HHHHHHHHHHTTCCCC
T ss_pred CEEEEecCCCcchhhhhhhhhhc--c---------------cccccccc--chH----------HHHHHHHHHHcCCCCC
Confidence 99998654432111110000000 0 00000000 000 0000111100000
Q ss_pred --hhccccEEEEcCccccchhhhccC-CCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCcccc-
Q 044266 208 --TIKKAERLICNSTYDLEPGALDLI-PEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVF- 283 (462)
Q Consensus 208 --~~~~~~~~l~ns~~~le~~~~~~~-p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~- 283 (462)
.....+.++..+.+.++++ ..+. .++.++++ ..+.++.+|++..+++++|||++||....
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~---------------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDY---------------NGPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCC---------------CSSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred CccccCCCeEEEecCccccCC-CCCCCCceeeeCC---------------CCCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 0012345666666666543 2221 12222211 11223457887666678999999998653
Q ss_pred --CHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhh
Q 044266 284 --DKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTME 361 (462)
Q Consensus 284 --~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~e 361 (462)
..+.+..+++++...+.++||..+.. ....+. ..++|+++.+|+||.++|+.+++ ||||||+||++|
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~E 350 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHT 350 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHH
Confidence 33567788899988889999988754 111121 23678999999999999988777 999999999999
Q ss_pred hhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhHhhcCCC
Q 044266 362 GVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLNSVREGGQ 441 (462)
Q Consensus 362 al~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~ 441 (462)
++++|+|+|++|...||..||+++++ .|+|+.++. ..+++++|.++|+++++|++++++++++++++.+. .
T Consensus 351 a~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~- 421 (441)
T 2yjn_A 351 AAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLAE----P- 421 (441)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----C-
T ss_pred HHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcC----C-
Confidence 99999999999999999999999999 599999874 56899999999999999999999999999999862 3
Q ss_pred cHHHHHHHHHHHH
Q 044266 442 SDKTFKNFVQWIK 454 (462)
Q Consensus 442 ~~~~~~~~~~~~~ 454 (462)
+.+.+.+.++.+.
T Consensus 422 ~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 422 SPAEVVGICEELA 434 (441)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 3344444444443
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.8e-40 Score=319.80 Aligned_cols=359 Identities=15% Similarity=0.123 Sum_probs=253.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCC-----------CC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGME-----------PE 73 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~-----------~~ 73 (462)
|||++++.++.||++|+++||++|+++||+|++++++...+.+... |+.++.++.... +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 4899999999999999999999999999999999998877777665 888888875430 00
Q ss_pred CCCC--CHHHHH-HH-HHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhH
Q 044266 74 GDRN--DLGMLT-KT-MVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSV 149 (462)
Q Consensus 74 ~~~~--~~~~~~-~~-~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 149 (462)
.... .....+ .. +...+...+.++.+.+++ .+||+||+|.+.+++..+|+.+|||++.+.+.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 0001 111111 22 222233345556665665 89999999988788899999999999987642210
Q ss_pred hhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHh-hhhhccccEEEEcCccccchhhh
Q 044266 150 QRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDN-NETIKKAERLICNSTYDLEPGAL 228 (462)
Q Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~~~~ 228 (462)
..++ . ... .....+..... ......++.+++++.+.++++ .
T Consensus 141 -----------------------~~~~--------~-~~~-----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~ 182 (384)
T 2p6p_A 141 -----------------------ADGI--------H-PGA-----DAELRPELSELGLERLPAPDLFIDICPPSLRPA-N 182 (384)
T ss_dssp -----------------------CTTT--------H-HHH-----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-T
T ss_pred -----------------------cchh--------h-HHH-----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-C
Confidence 0000 0 000 00000000000 000112678999999988865 3
Q ss_pred ccC-CCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCcccc-----CHHHHHHHHHHHHhCCCCE
Q 044266 229 DLI-PEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVF-----DKEQFQELASGLELTNRPF 302 (462)
Q Consensus 229 ~~~-p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~a~~~~~~~~ 302 (462)
++. +++.+++. . .+.++.+|++..+++++||+++||.... ..+.+..+++++++.+.++
T Consensus 183 ~~~~~~~~~~~~-~--------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~ 247 (384)
T 2p6p_A 183 AAPARMMRHVAT-S--------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVEL 247 (384)
T ss_dssp SCCCEECCCCCC-C--------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEE
T ss_pred CCCCCceEecCC-C--------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEE
Confidence 332 24444421 1 1123447887655678999999998754 4567888999998888999
Q ss_pred EEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhH
Q 044266 303 LWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNE 382 (462)
Q Consensus 303 i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na 382 (462)
+|+.++. . .+.+ +..++|+++ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||
T Consensus 248 ~~~~g~~----~----~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a 315 (384)
T 2p6p_A 248 IVAAPDT----V----AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPA 315 (384)
T ss_dssp EEECCHH----H----HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHH
T ss_pred EEEeCCC----C----HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHH
Confidence 9987632 1 1112 235789999 99999999988777 999999999999999999999999999999999
Q ss_pred HhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHHhhh
Q 044266 383 SYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLNSVREGGQSDKTFKNFVQWIKAEA 457 (462)
Q Consensus 383 ~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 457 (462)
.++++ .|+|+.++. ..+++++|.++|+++|+|++++++++++++++++. . ..+.+.+.++.+...+
T Consensus 316 ~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~i~~~~~~~ 381 (384)
T 2p6p_A 316 RRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISGM----P-LPATVVTALEQLAHHH 381 (384)
T ss_dssp HHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----C-CHHHHHHHHHHHHHHH
T ss_pred HHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhC----C-CHHHHHHHHHHHhhhc
Confidence 99999 599999864 56899999999999999999999999999999873 3 3344444444444433
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.7e-41 Score=329.15 Aligned_cols=372 Identities=15% Similarity=0.190 Sum_probs=254.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCC-----CC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGD-----RN 77 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~-----~~ 77 (462)
+++||+|++.++.||++|++.|+++|+++||+|+++++....+.+.+. |++++.++...+.... ..
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCCSCCTTSCGGGGCS
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCcCccccccccccch
Confidence 357999999999999999999999999999999999999887766665 8999998865432211 12
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCCC
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDGI 157 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 157 (462)
+....+..+...+...+..+.+.+++ .+||+||+|...+++..+|+.+|||++.+.+.+.........+......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-- 151 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR-- 151 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh--
Confidence 33344444433334445556666665 8999999998777899999999999999886553110000000000000
Q ss_pred cCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhccCCC-ccc
Q 044266 158 VDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALDLIPE-FLP 236 (462)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~p~-v~~ 236 (462)
.....++...+ ...+. .++........ ..+....++.+++++.+.++++...+.++ +++
T Consensus 152 -----------~~~~~~~~~~~-~~~~~-~~~~~~g~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~ 211 (430)
T 2iyf_A 152 -----------EPRQTERGRAY-YARFE-AWLKENGITEH-------PDTFASHPPRSLVLIPKALQPHADRVDEDVYTF 211 (430)
T ss_dssp -----------HHHHSHHHHHH-HHHHH-HHHHHTTCCSC-------HHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEE
T ss_pred -----------hhccchHHHHH-HHHHH-HHHHHhCCCCC-------HHHHhcCCCcEEEeCcHHhCCCcccCCCccEEE
Confidence 00000000000 00000 00000000000 00112256889999999998764455667 999
Q ss_pred cCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCccc
Q 044266 237 IGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELT-NRPFLWVVRPDITNDAI 315 (462)
Q Consensus 237 vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~ 315 (462)
+||........ .+|.+..+++++||+++||......+.+..++++++.. +.+++|.++.+...
T Consensus 212 vG~~~~~~~~~-------------~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--- 275 (430)
T 2iyf_A 212 VGACQGDRAEE-------------GGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--- 275 (430)
T ss_dssp CCCCC-----C-------------CCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG---
T ss_pred eCCcCCCCCCC-------------CCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh---
Confidence 99864321100 12333344577999999998855667788899999875 77888887754211
Q ss_pred ccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEe
Q 044266 316 DAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRF 395 (462)
Q Consensus 316 ~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~ 395 (462)
+.+ +..++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|+.++++ .|+|+.+
T Consensus 276 ----~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~ 347 (430)
T 2iyf_A 276 ----AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKL 347 (430)
T ss_dssp ----GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEEC
T ss_pred ----HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEc
Confidence 111 124678999999999999999888 99999999999999999999999999999999999999 5999998
Q ss_pred ecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhH
Q 044266 396 NKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLNS 435 (462)
Q Consensus 396 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~ 435 (462)
.. +.+++++|.++|.++++|+++++++.++++++.+.
T Consensus 348 ~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 348 AT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQE 384 (430)
T ss_dssp CC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 64 56799999999999999999999999999998763
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.4e-38 Score=309.25 Aligned_cols=346 Identities=13% Similarity=0.105 Sum_probs=227.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCC---------C
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEP---------E 73 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~---------~ 73 (462)
.+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+... |+.+..++..... .
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccC
Confidence 368999999999999999999999999999999999998888888776 8888888632110 0
Q ss_pred ---CCCCCHHH----HHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHHHH
Q 044266 74 ---GDRNDLGM----LTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLALS 146 (462)
Q Consensus 74 ---~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 146 (462)
........ ....+.......+.++.+.+++ ++||+|++|...+++..+|+.+|||++.+...........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 00111211 1222222233344455555555 8999999998888899999999999998765432110000
Q ss_pred HhHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHh-hhhhccccEEEEcCccccch
Q 044266 147 FSVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDN-NETIKKAERLICNSTYDLEP 225 (462)
Q Consensus 147 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ns~~~le~ 225 (462)
... . . .+....... .......+..+....+.++.
T Consensus 162 ~~~-----------------------------------~-~---------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T 4fzr_A 162 SAG-----------------------------------V-G---------ELAPELAELGLTDFPDPLLSIDVCPPSMEA 196 (398)
T ss_dssp HHH-----------------------------------H-H---------HTHHHHHTTTCSSCCCCSEEEECSCGGGC-
T ss_pred HHH-----------------------------------H-H---------HHHHHHHHcCCCCCCCCCeEEEeCChhhCC
Confidence 000 0 0 000000000 00012234555556565554
Q ss_pred hhhccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCcccc--------CHHHHHHHHHHHHh
Q 044266 226 GALDLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVF--------DKEQFQELASGLEL 297 (462)
Q Consensus 226 ~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~a~~~ 297 (462)
+......++.++++.. ...++..|+...+++++||+++||.... ..+.+..+++++..
T Consensus 197 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (398)
T 4fzr_A 197 QPKPGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK 262 (398)
T ss_dssp ---CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGG
T ss_pred CCCCCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHh
Confidence 3111111222232110 1223346776656678999999998543 33468889999988
Q ss_pred CCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccc
Q 044266 298 TNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFAD 377 (462)
Q Consensus 298 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~D 377 (462)
.+.+++|+.++. .. +.+ +..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...|
T Consensus 263 ~~~~~v~~~~~~----~~----~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~ 331 (398)
T 4fzr_A 263 LGFEVVVAVSDK----LA----QTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAE 331 (398)
T ss_dssp GTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGG
T ss_pred CCCEEEEEeCCc----ch----hhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchh
Confidence 888998887654 11 111 134789999999999999999887 9999999999999999999999999999
Q ss_pred hhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 378 QFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 378 Q~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
|..|+.++++ .|+|+.++. ..++++.|.++|+++|+|++++++++++++++.+
T Consensus 332 q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 332 VWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp GHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 9999999999 599999974 5679999999999999999999999999999986
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=7.9e-38 Score=303.98 Aligned_cols=351 Identities=15% Similarity=0.172 Sum_probs=238.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCC-----------
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGME----------- 71 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~----------- 71 (462)
++|||+|++.++.||++|++.||++|.++||+|+++++ .+.+.+... |+.+..++....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccC
Confidence 35799999999999999999999999999999999999 887878776 899999885421
Q ss_pred -----------CCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchh
Q 044266 72 -----------PEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAA 140 (462)
Q Consensus 72 -----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~ 140 (462)
...........+..+ ....+.++.+.+++ ++||+||+|...+++..+|+.+|||++.+.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~ 162 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAV---NRPLVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW 162 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHH---HGGGHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred CccccccccCChhhhHHHHHHHHHHH---HHHHHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCC
Confidence 011111122222222 22334444444554 8999999998888899999999999998654321
Q ss_pred HHHHHHHhHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCc
Q 044266 141 GLLALSFSVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNST 220 (462)
Q Consensus 141 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~ 220 (462)
.. .... .... .. +........-.....+..+....
T Consensus 163 ~~-------------------------------~~~~---------~~~~-~~----l~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T 3oti_A 163 RT-------------------------------RGMH---------RSIA-SF----LTDLMDKHQVSLPEPVATIESFP 197 (398)
T ss_dssp CC-------------------------------TTHH---------HHHH-TT----CHHHHHHTTCCCCCCSEEECSSC
T ss_pred Cc-------------------------------cchh---------hHHH-HH----HHHHHHHcCCCCCCCCeEEEeCC
Confidence 10 0000 0000 00 00000000000122345555555
Q ss_pred cccchhhhccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCcccc--CHHHHHHHHHHHHhC
Q 044266 221 YDLEPGALDLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVF--DKEQFQELASGLELT 298 (462)
Q Consensus 221 ~~le~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~a~~~~ 298 (462)
+.+..+.......+.++ |. ........|+...+++++||+++||.... ..+.+..++++++..
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~ 262 (398)
T 3oti_A 198 PSLLLEAEPEGWFMRWV-PY--------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEV 262 (398)
T ss_dssp GGGGTTSCCCSBCCCCC-CC--------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS
T ss_pred HHHCCCCCCCCCCcccc-CC--------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcC
Confidence 55553311111112222 10 01112224555455678999999998543 566788899999888
Q ss_pred CCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccch
Q 044266 299 NRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQ 378 (462)
Q Consensus 299 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ 378 (462)
+.+++|+.++. ....+. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||
T Consensus 263 ~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq 331 (398)
T 3oti_A 263 DADFVLALGDL----DISPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQ 331 (398)
T ss_dssp SSEEEEECTTS----CCGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCC
T ss_pred CCEEEEEECCc----Chhhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchh
Confidence 89999988765 111111 24678999999999999999877 99999999999999999999999999999
Q ss_pred hhhH--HhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHH
Q 044266 379 FLNE--SYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLNSVREGGQSDKTFKNFVQWI 453 (462)
Q Consensus 379 ~~na--~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 453 (462)
..|+ .++++ .|+|+.++. .+.+++.|. ++|+|++++++++++++++.+. .+...+.+.++.+
T Consensus 332 ~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l 395 (398)
T 3oti_A 332 FQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVAL-----PTPAETVRRIVER 395 (398)
T ss_dssp SSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTS-----CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHH
Confidence 9999 99999 599999974 557887777 8899999999999999999863 3344455555544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.7e-36 Score=294.09 Aligned_cols=346 Identities=12% Similarity=0.144 Sum_probs=234.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEc-CCCCCCCCC-------
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSI-PDGMEPEGD------- 75 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i-~~~~~~~~~------- 75 (462)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... |+.+..+ +........
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 36999999999999999999999999999999999998877777776 8888888 422110000
Q ss_pred ------CCCHHHHHHHHHHhccHH-------HHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHH
Q 044266 76 ------RNDLGMLTKTMVRVMPEK-------LEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGL 142 (462)
Q Consensus 76 ------~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 142 (462)
..........+....... +.++.+.+++ ++||+|++|...+++..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 000011111222211122 5555555555 899999999877788899999999999876433210
Q ss_pred HHHHHhHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhh-hhhccccEEEEcCcc
Q 044266 143 LALSFSVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNN-ETIKKAERLICNSTY 221 (462)
Q Consensus 143 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~ 221 (462)
... .. ...+. .+........ ......+.++..+.+
T Consensus 149 ~~~------------------------------~~-----~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (391)
T 3tsa_A 149 AGP------------------------------FS-----DRAHE---------LLDPVCRHHGLTGLPTPELILDPCPP 184 (391)
T ss_dssp TTH------------------------------HH-----HHHHH---------HHHHHHHHTTSSSSCCCSEEEECSCG
T ss_pred ccc------------------------------cc-----chHHH---------HHHHHHHHcCCCCCCCCceEEEecCh
Confidence 000 00 00000 0000000000 011223666777776
Q ss_pred ccchhhhccCCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccc--cC-HHHHHHHHHHHHhC
Q 044266 222 DLEPGALDLIPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTV--FD-KEQFQELASGLELT 298 (462)
Q Consensus 222 ~le~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~a~~~~ 298 (462)
+++.........+.++ |.. .......|+...+++++||+++||... .. .+.+..++++ +..
T Consensus 185 ~~~~~~~~~~~~~~~~-p~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~ 248 (391)
T 3tsa_A 185 SLQASDAPQGAPVQYV-PYN--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL 248 (391)
T ss_dssp GGSCTTSCCCEECCCC-CCC--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS
T ss_pred hhcCCCCCccCCeeee-cCC--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC
Confidence 6664421111123333 111 112233566655667899999999843 33 6778888888 777
Q ss_pred -CCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccc
Q 044266 299 -NRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFAD 377 (462)
Q Consensus 299 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~D 377 (462)
+.+++|..++. ....+. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...|
T Consensus 249 p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~ 317 (391)
T 3tsa_A 249 PGVEAVIAVPPE----HRALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFD 317 (391)
T ss_dssp TTEEEEEECCGG----GGGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred CCeEEEEEECCc----chhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCccc
Confidence 67888876643 111121 23678999999999999988777 9999999999999999999999999999
Q ss_pred hhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 378 QFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 378 Q~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
|..|+.++++ .|+|+.+..+ +...+++.|.++|.++|+|++++++++++++++.+
T Consensus 318 q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 318 QFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA 372 (391)
T ss_dssp HHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc
Confidence 9999999999 5999999520 03478999999999999999999999999999976
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=3e-34 Score=280.20 Aligned_cols=346 Identities=18% Similarity=0.216 Sum_probs=239.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCC------------C
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDG------------M 70 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~------------~ 70 (462)
++|||+|++.++.||++|++.||++|+++||+|++++++...+.+... |+.+..++.. .
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhh
Confidence 468999999999999999999999999999999999998877777666 8999988741 0
Q ss_pred CCC-CCCCCHHH----HHHHHHHh-ccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchhHHHH
Q 044266 71 EPE-GDRNDLGM----LTKTMVRV-MPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAAGLLA 144 (462)
Q Consensus 71 ~~~-~~~~~~~~----~~~~~~~~-~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 144 (462)
... ........ ....+... ....+.++.+.+++ .+||+|++|...+++..+|+.+|||++.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~-- 164 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP-- 164 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC--
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc--
Confidence 000 00001111 11111111 11223444444554 899999999877788899999999999865432210
Q ss_pred HHHhHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHh------hhhhccccEEEEc
Q 044266 145 LSFSVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDN------NETIKKAERLICN 218 (462)
Q Consensus 145 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~n 218 (462)
++.. ..+. . .+.+..... ......++.++..
T Consensus 165 -----------------------------~~~~----~~~~-~---------~~~~~~~~~g~~~~~~~~~~~~d~~i~~ 201 (412)
T 3otg_A 165 -----------------------------DDLT----RSIE-E---------EVRGLAQRLGLDLPPGRIDGFGNPFIDI 201 (412)
T ss_dssp -----------------------------SHHH----HHHH-H---------HHHHHHHHTTCCCCSSCCGGGGCCEEEC
T ss_pred -----------------------------hhhh----HHHH-H---------HHHHHHHHcCCCCCcccccCCCCeEEee
Confidence 0000 0000 0 000000000 0002355677777
Q ss_pred CccccchhhhccCC---CccccCcccCCCCCCCCCCCCCCCCchhhHh-hccCCCCcEEEEeccCccccCHHHHHHHHHH
Q 044266 219 STYDLEPGALDLIP---EFLPIGPLLSSNRLGNSAGYFWPEDSTCLKW-LDQQQQNSVIYVAFGSFTVFDKEQFQELASG 294 (462)
Q Consensus 219 s~~~le~~~~~~~p---~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 294 (462)
+...++........ .+.++++- .......| ....+++++|++++||......+.+..++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 266 (412)
T 3otg_A 202 FPPSLQEPEFRARPRRHELRPVPFA---------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266 (412)
T ss_dssp SCGGGSCHHHHTCTTEEECCCCCCC---------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHH
T ss_pred CCHHhcCCcccCCCCcceeeccCCC---------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHH
Confidence 77776654221111 11111111 11122345 2323457799999999876677788899999
Q ss_pred HHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhhhcCCceecccc
Q 044266 295 LELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPY 374 (462)
Q Consensus 295 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~ 374 (462)
++..+.+++|..++.... ..+. ..++|+.+.+|+|+.++|+++++ ||+|||+||++||+++|+|+|++|.
T Consensus 267 l~~~~~~~~~~~g~~~~~---~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~ 336 (412)
T 3otg_A 267 LAGLDADVLVASGPSLDV---SGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPW 336 (412)
T ss_dssp HHTSSSEEEEECCSSCCC---TTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCC
T ss_pred HHcCCCEEEEEECCCCCh---hhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCC
Confidence 988888999888765211 1111 23578999999999999999888 9999999999999999999999999
Q ss_pred ccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 375 FADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 375 ~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
..||..|+..+++. |+|..+.. ..++++.|.++|.++++|+++++++.+.++++.+
T Consensus 337 ~~~q~~~~~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 337 AGDSFANAQAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA 392 (412)
T ss_dssp STTHHHHHHHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence 99999999999994 99999974 5679999999999999999999999999999886
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.2e-29 Score=242.39 Aligned_cols=318 Identities=15% Similarity=0.119 Sum_probs=197.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc--hHHHHHhhcCCCCCCCCeEEEEcCC-CCCCCCCCCCHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN--HKRVVNALGQNNYIGDQIKLVSIPD-GMEPEGDRNDLG 80 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~--~~~v~~~~~~~~~~~~~i~~~~i~~-~~~~~~~~~~~~ 80 (462)
+.||++...|+.||++|.++||++|.++||+|+|+++... .+.+.+. |++++.++. ++........+.
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~ 72 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVSGLRGKGLKSLVK 72 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC--------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECCCcCCCCHHHHHH
Confidence 4599999998899999999999999999999999998754 2344444 888888873 222211111111
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCCCc
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDGIV 158 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (462)
..++.+ . .+.+..+.+++ .+||+||++..+. .+..+|+.+|||++..-. .
T Consensus 73 ~~~~~~-~----~~~~~~~~l~~---~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-n------------------- 124 (365)
T 3s2u_A 73 APLELL-K----SLFQALRVIRQ---LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-N------------------- 124 (365)
T ss_dssp CHHHHH-H----HHHHHHHHHHH---HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-S-------------------
T ss_pred HHHHHH-H----HHHHHHHHHHh---cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-c-------------------
Confidence 111111 1 12223333444 8999999997666 345678999999986311 0
Q ss_pred CCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhccCCCccccC
Q 044266 159 DDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALDLIPEFLPIG 238 (462)
Q Consensus 159 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~p~v~~vG 238 (462)
.+||+.. +++ .+.++.++.. +++. .+..++++++|
T Consensus 125 -------------~~~G~~n--------r~l-------------------~~~a~~v~~~-~~~~----~~~~~k~~~~g 159 (365)
T 3s2u_A 125 -------------AVAGTAN--------RSL-------------------APIARRVCEA-FPDT----FPASDKRLTTG 159 (365)
T ss_dssp -------------SSCCHHH--------HHH-------------------GGGCSEEEES-STTS----SCC---CEECC
T ss_pred -------------hhhhhHH--------Hhh-------------------ccccceeeec-cccc----ccCcCcEEEEC
Confidence 1222110 000 1223444332 2221 12234666777
Q ss_pred cccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhC----CCCEEEEEcCCCCCcc
Q 044266 239 PLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELT----NRPFLWVVRPDITNDA 314 (462)
Q Consensus 239 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~ 314 (462)
+.......... . ......+++++|++..||.+.. ...+.+.+++... +..+++.++.. .
T Consensus 160 ~pvr~~~~~~~-------~----~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~----~ 222 (365)
T 3s2u_A 160 NPVRGELFLDA-------H----ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ----H 222 (365)
T ss_dssp CCCCGGGCCCT-------T----SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT----T
T ss_pred CCCchhhccch-------h----hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc----c
Confidence 55443221100 0 0011123466999999987643 2333455555443 33466666543 1
Q ss_pred cccCchhHHHHhcCCceeecccCcc-cccCCCCcccceeccCchhhhhhhhcCCceeccccc----cchhhhHHhHhhhh
Q 044266 315 IDAYPEGFQDRVATRRQMVGWAPQQ-KVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYF----ADQFLNESYICDIW 389 (462)
Q Consensus 315 ~~~~~~~~~~~~~~~v~~~~~~pq~-~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~ 389 (462)
...+. ...+..+.++.+.+|+++. ++|+.+|+ +|||+|.+|++|++++|+|+|++|+- .+|..||+.+++.
T Consensus 223 ~~~~~-~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~- 298 (365)
T 3s2u_A 223 AEITA-ERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS- 298 (365)
T ss_dssp HHHHH-HHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-
T ss_pred ccccc-ceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-
Confidence 11111 1122346788899999985 79999888 99999999999999999999999863 5899999999995
Q ss_pred eeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHH
Q 044266 390 KVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALD 427 (462)
Q Consensus 390 g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 427 (462)
|+|+.++. .+++++.|.++|.++++|++.+++..+
T Consensus 299 G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~ 333 (365)
T 3s2u_A 299 GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMAD 333 (365)
T ss_dssp TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence 99999973 678999999999999999876554333
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.7e-28 Score=207.38 Aligned_cols=165 Identities=22% Similarity=0.448 Sum_probs=140.2
Q ss_pred CCCCchhhHhhccCCCCcEEEEeccCcc-ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCcee
Q 044266 254 WPEDSTCLKWLDQQQQNSVIYVAFGSFT-VFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQM 332 (462)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 332 (462)
++.++++.+|++..+++++||+++||.. ....+.+..++++++..+.+++|+.++. . ++ ..++|+++
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~----~~----~~~~~v~~ 72 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----K----PD----TLGLNTRL 72 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----C----CT----TCCTTEEE
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----C----cc----cCCCcEEE
Confidence 3577899999987767789999999985 4467788899999988888999988654 1 11 13578999
Q ss_pred ecccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHH
Q 044266 333 VGWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKV 412 (462)
Q Consensus 333 ~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i 412 (462)
.+|+||.++|.|+.+++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++. ..+++++|.++|
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i 148 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNAL 148 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHH
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHH
Confidence 9999999999777777799999999999999999999999999999999999999 599999974 568999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHHHh
Q 044266 413 DQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 413 ~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
+++++|++|+++++++++.+++
T Consensus 149 ~~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 149 KRVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHCHHHHHHHHHHC-----
T ss_pred HHHHcCHHHHHHHHHHHHHhhC
Confidence 9999999999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.89 E-value=1.1e-21 Score=187.92 Aligned_cols=321 Identities=12% Similarity=0.091 Sum_probs=198.8
Q ss_pred CCCC--CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch--HHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCC
Q 044266 1 MLRR--PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH--KRVVNALGQNNYIGDQIKLVSIPDGMEPEGDR 76 (462)
Q Consensus 1 ~~~~--~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 76 (462)
||++ +||++++.+..||..+++.|++.|.++||+|++++..... +.+.+. |++++.++......
T Consensus 1 mM~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~--- 68 (364)
T 1f0k_A 1 MMSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH---------GIEIDFIRISGLRG--- 68 (364)
T ss_dssp ------CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG---------TCEEEECCCCCCTT---
T ss_pred CCCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc---------CCceEEecCCccCc---
Confidence 4444 7999999888899999999999999999999999986532 233333 78887776321111
Q ss_pred CCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhc
Q 044266 77 NDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLD 154 (462)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 154 (462)
......+...... ...+..+.+.+++ .+||+|+++.... .+..+++.+|+|++......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~--------------- 129 (364)
T 1f0k_A 69 KGIKALIAAPLRI-FNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG--------------- 129 (364)
T ss_dssp CCHHHHHTCHHHH-HHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS---------------
T ss_pred CccHHHHHHHHHH-HHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC---------------
Confidence 1111111111111 1123344444444 8999999986542 45667888999998632210
Q ss_pred CCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhccCCCc
Q 044266 155 DGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALDLIPEF 234 (462)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~~p~v 234 (462)
.++. . . + ...+.++.+++.+... .+++
T Consensus 130 ------------------~~~~--------~-~------------~------~~~~~~d~v~~~~~~~--------~~~~ 156 (364)
T 1f0k_A 130 ------------------IAGL--------T-N------------K------WLAKIATKVMQAFPGA--------FPNA 156 (364)
T ss_dssp ------------------SCCH--------H-H------------H------HHTTTCSEEEESSTTS--------SSSC
T ss_pred ------------------CCcH--------H-H------------H------HHHHhCCEEEecChhh--------cCCc
Confidence 0000 0 0 0 0113456666654322 2245
Q ss_pred cccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCC
Q 044266 235 LPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELT--NRPFLWVVRPDITN 312 (462)
Q Consensus 235 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~ 312 (462)
..+|......... .+. ....+...++++++++..|+.. ..+....++++++.. +.++++.++.+
T Consensus 157 ~~i~n~v~~~~~~--------~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~--- 222 (364)
T 1f0k_A 157 EVVGNPVRTDVLA--------LPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKG--- 222 (364)
T ss_dssp EECCCCCCHHHHT--------SCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTT---
T ss_pred eEeCCccchhhcc--------cch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCc---
Confidence 5555432211100 001 1112222234567888888864 344455566666443 45556666654
Q ss_pred cccccCchhHHH---Hhc-CCceeecccCc-ccccCCCCcccceeccCchhhhhhhhcCCceeccccc---cchhhhHHh
Q 044266 313 DAIDAYPEGFQD---RVA-TRRQMVGWAPQ-QKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYF---ADQFLNESY 384 (462)
Q Consensus 313 ~~~~~~~~~~~~---~~~-~~v~~~~~~pq-~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~---~DQ~~na~~ 384 (462)
. .+.+.+ ..+ +||.+.+|+++ ..+|+.+++ +|+++|.++++||+++|+|+|+.|.. .||..|+..
T Consensus 223 -~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~ 295 (364)
T 1f0k_A 223 -S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALP 295 (364)
T ss_dssp -C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHH
T ss_pred -h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHH
Confidence 1 122222 222 58999999965 579988888 99999999999999999999999987 799999999
Q ss_pred HhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 044266 385 ICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDLKETS 432 (462)
Q Consensus 385 v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 432 (462)
+.+. |.|..++. .+++++++.++|.++ |++.+++..+.+.+.
T Consensus 296 ~~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~ 337 (364)
T 1f0k_A 296 LEKA-GAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAA 337 (364)
T ss_dssp HHHT-TSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred HHhC-CcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHh
Confidence 9984 99998864 556799999999999 887766655554443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.70 E-value=3e-16 Score=142.11 Aligned_cols=115 Identities=10% Similarity=0.086 Sum_probs=88.6
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHh--cCCceeecccCcc-cccCCCC
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRV--ATRRQMVGWAPQQ-KVLTHPS 346 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~pq~-~ll~~~~ 346 (462)
.+.|+|++|... .......+++++.... ++.++.+++ ....+.+.+.. ..|+.+..|+++. .+|+.+|
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 568999999753 2335567788876543 677777665 12223333221 3588999999986 6998888
Q ss_pred cccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeec
Q 044266 347 IACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNK 397 (462)
Q Consensus 347 ~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~ 397 (462)
+ +||+|| +|++|+++.|+|+|++|...+|..||+.+++ .|.|..+..
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 8 999999 8999999999999999999999999999999 499998853
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=9.7e-16 Score=132.93 Aligned_cols=131 Identities=8% Similarity=0.042 Sum_probs=94.1
Q ss_pred CCCcEEEEeccCccccCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCCcccccCchhHHHHh---------------
Q 044266 268 QQNSVIYVAFGSFTVFDKEQFQEL-----ASGLELTN-RPFLWVVRPDITNDAIDAYPEGFQDRV--------------- 326 (462)
Q Consensus 268 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~--------------- 326 (462)
+++++|||+.||... -.+.+..+ ++++...+ .++++.++.... .....+.+..
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhcccccccccccccc
Confidence 457899999999732 23334433 48887777 788888886521 0011111010
Q ss_pred -----------cC--CceeecccCcc-cccC-CCCcccceeccCchhhhhhhhcCCceeccccc----cchhhhHHhHhh
Q 044266 327 -----------AT--RRQMVGWAPQQ-KVLT-HPSIACFLSHCGWNSTMEGVSNGVPFLCWPYF----ADQFLNESYICD 387 (462)
Q Consensus 327 -----------~~--~v~~~~~~pq~-~ll~-~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~----~DQ~~na~~v~~ 387 (462)
.. ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 12 34456888875 7998 8888 99999999999999999999999974 369999999999
Q ss_pred hheeeEEeecCCCCccCHHHHHHHHHHH
Q 044266 388 IWKVGLRFNKNKNGIITREEIMKKVDQV 415 (462)
Q Consensus 388 ~~g~g~~~~~~~~~~~~~~~l~~~i~~l 415 (462)
.|+|+.+ +++.|.++|+++
T Consensus 178 -~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 -LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp -HSCCCEE--------CSCTTTHHHHHH
T ss_pred -CCCEEEc--------CHHHHHHHHHHH
Confidence 4998765 456677777776
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.58 E-value=2.1e-13 Score=131.52 Aligned_cols=321 Identities=13% Similarity=0.078 Sum_probs=176.4
Q ss_pred CCCCCEEEEEcC--C--CccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCC
Q 044266 1 MLRRPHVLAFPY--P--AQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDR 76 (462)
Q Consensus 1 ~~~~~~Il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 76 (462)
|++++||++++. + ..|.-..+..|++.| +||+|++++............ ...++.+..++......
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--- 70 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVMLP--- 70 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCCS---
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccccccc---
Confidence 788899998874 3 468888899999999 799999999877654212211 11378888776532111
Q ss_pred CCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhc
Q 044266 77 NDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLD 154 (462)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 154 (462)
.. .....+.++++. .+||+|++....+ ....+++.+|+|.+++....... .
T Consensus 71 -~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-~---------- 123 (394)
T 3okp_A 71 -TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-G---------- 123 (394)
T ss_dssp -CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-H----------
T ss_pred -ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-h----------
Confidence 11 111223444444 8999999865444 45566888999854432222110 0
Q ss_pred CCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhcc--CC
Q 044266 155 DGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALDL--IP 232 (462)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~--~p 232 (462)
+... ....... ....+.++.+++.+....+.-.... ..
T Consensus 124 ---------------------------------~~~~----~~~~~~~---~~~~~~~d~ii~~s~~~~~~~~~~~~~~~ 163 (394)
T 3okp_A 124 ---------------------------------WSML----PGSRQSL---RKIGTEVDVLTYISQYTLRRFKSAFGSHP 163 (394)
T ss_dssp ---------------------------------HTTS----HHHHHHH---HHHHHHCSEEEESCHHHHHHHHHHHCSSS
T ss_pred ---------------------------------hhhc----chhhHHH---HHHHHhCCEEEEcCHHHHHHHHHhcCCCC
Confidence 0000 0000000 1123678888888876554321112 23
Q ss_pred CccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHH---HhC--CCCEEEEEc
Q 044266 233 EFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGL---ELT--NRPFLWVVR 307 (462)
Q Consensus 233 ~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~---~~~--~~~~i~~~~ 307 (462)
++..+..-......... ......++.+.+.- +++..+++..|+... .+.+..+++++ .+. +.++++. +
T Consensus 164 ~~~vi~ngv~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~-G 236 (394)
T 3okp_A 164 TFEHLPSGVDVKRFTPA---TPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIV-G 236 (394)
T ss_dssp EEEECCCCBCTTTSCCC---CHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEE-C
T ss_pred CeEEecCCcCHHHcCCC---CchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEE-c
Confidence 55555433222111100 00001112222222 223366777787632 22233344443 222 3444443 3
Q ss_pred CCCCCcccccCchhHH---HHhcCCceeecccCcc---cccCCCCccccee-----------ccCchhhhhhhhcCCcee
Q 044266 308 PDITNDAIDAYPEGFQ---DRVATRRQMVGWAPQQ---KVLTHPSIACFLS-----------HCGWNSTMEGVSNGVPFL 370 (462)
Q Consensus 308 ~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~pq~---~ll~~~~~~~~I~-----------HgG~~sv~eal~~GvP~l 370 (462)
.+ ...+.+. ....+++.+.+|+|+. .++..+++ +|. -|..++++||+++|+|+|
T Consensus 237 ~g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI 307 (394)
T 3okp_A 237 SG-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVI 307 (394)
T ss_dssp CC-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEE
T ss_pred Cc-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEE
Confidence 32 1112222 1235789999999865 47888888 776 566679999999999999
Q ss_pred ccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHH
Q 044266 371 CWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARA 425 (462)
Q Consensus 371 ~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a 425 (462)
+.+.. .....+.+ |.|..++ .-+.+++.++|.++++|++.+++.
T Consensus 308 ~~~~~----~~~e~i~~--~~g~~~~-----~~d~~~l~~~i~~l~~~~~~~~~~ 351 (394)
T 3okp_A 308 AGTSG----GAPETVTP--ATGLVVE-----GSDVDKLSELLIELLDDPIRRAAM 351 (394)
T ss_dssp ECSST----TGGGGCCT--TTEEECC-----TTCHHHHHHHHHHHHTCHHHHHHH
T ss_pred EeCCC----ChHHHHhc--CCceEeC-----CCCHHHHHHHHHHHHhCHHHHHHH
Confidence 97643 33334444 5777774 358999999999999998654433
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.52 E-value=1.5e-13 Score=131.70 Aligned_cols=135 Identities=13% Similarity=0.159 Sum_probs=87.5
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCcccccCchhHHHHh--cCCceeecccCc---c
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELT-----NRPFLWVVRPDITNDAIDAYPEGFQDRV--ATRRQMVGWAPQ---Q 339 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~pq---~ 339 (462)
+++|+++.|...... .+..++++++.. +.++++..+.+ . .+.+.+.+.. .++|++.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~----~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN----P--VVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC----H--HHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC----H--HHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457878888653222 345556665332 34454443433 0 1112222221 358888866665 4
Q ss_pred cccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCH
Q 044266 340 KVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 340 ~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
.+|+.+++ ||+.+| |.++||+++|+|+|+.+...++... .+. |.|+.++ .++++|.++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 78988887 999884 4466999999999998876666653 343 8887773 38999999999999998
Q ss_pred HHHHHHH
Q 044266 420 NFKARAL 426 (462)
Q Consensus 420 ~~~~~a~ 426 (462)
+.+++..
T Consensus 336 ~~~~~~~ 342 (376)
T 1v4v_A 336 EELSRMR 342 (376)
T ss_dssp HHHHHHH
T ss_pred Hhhhhhc
Confidence 7655444
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.51 E-value=6.9e-12 Score=122.70 Aligned_cols=370 Identities=11% Similarity=0.062 Sum_probs=187.4
Q ss_pred CCCEEEEEcC-----------CCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCC
Q 044266 3 RRPHVLAFPY-----------PAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGME 71 (462)
Q Consensus 3 ~~~~Il~~~~-----------~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~ 71 (462)
+++||++++. ...|+-.....|++.|.++||+|++++.......-... ...+++.++.++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPY 93 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCc
Confidence 4789999985 23688889999999999999999999976532111000 0113788877764321
Q ss_pred CCCCCCCHHHHHHHHHHhccHHHHHHHHH-HhhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEccchhHHHHHHHh
Q 044266 72 PEGDRNDLGMLTKTMVRVMPEKLEELIEN-INRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWPAAAGLLALSFS 148 (462)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 148 (462)
...........+..+ ...+++. ++.. .+||+|++..... .+..+++.+|+|+|...........
T Consensus 94 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~---- 160 (438)
T 3c48_A 94 EGLSKEELPTQLAAF-------TGGMLSFTRREK--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN---- 160 (438)
T ss_dssp SSCCGGGGGGGHHHH-------HHHHHHHHHHHT--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS----
T ss_pred cccchhHHHHHHHHH-------HHHHHHHHHhcc--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc----
Confidence 111111111111111 1122222 2220 3599999875332 3445677889999876554321100
Q ss_pred HhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhh
Q 044266 149 VQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGAL 228 (462)
Q Consensus 149 ~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~ 228 (462)
..+.. .... . ....... .....+.+|.+++.+....+.-..
T Consensus 161 -------------------------~~~~~---~~~~-~--------~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 161 -------------------------SYRDD---SDTP-E--------SEARRIC--EQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp -------------------------CC-------CCH-H--------HHHHHHH--HHHHHHHCSEEEESSHHHHHHHHH
T ss_pred -------------------------ccccc---cCCc-c--------hHHHHHH--HHHHHhcCCEEEEcCHHHHHHHHH
Confidence 00000 0000 0 0000000 012346788999988765543211
Q ss_pred cc--C-CCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHh---C----
Q 044266 229 DL--I-PEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLEL---T---- 298 (462)
Q Consensus 229 ~~--~-p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~---~---- 298 (462)
.+ . .++..+.......... + ........+.+-+.-.. ...+++..|+... .+....+++++.. .
T Consensus 202 ~~g~~~~k~~vi~ngvd~~~~~-~--~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~ 275 (438)
T 3c48_A 202 HYDADPDRISVVSPGADVELYS-P--GNDRATERSRRELGIPL-HTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDR 275 (438)
T ss_dssp HHCCCGGGEEECCCCCCTTTSC-C--C----CHHHHHHTTCCS-SSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTC
T ss_pred HhCCChhheEEecCCccccccC-C--cccchhhhhHHhcCCCC-CCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCc
Confidence 11 1 2344454332211111 0 00000011222222212 3366777788643 2223333344322 1
Q ss_pred CCCEEEEEcCCCCCcccccCchhHHH---H--hcCCceeecccCcc---cccCCCCcccceec----cCchhhhhhhhcC
Q 044266 299 NRPFLWVVRPDITNDAIDAYPEGFQD---R--VATRRQMVGWAPQQ---KVLTHPSIACFLSH----CGWNSTMEGVSNG 366 (462)
Q Consensus 299 ~~~~i~~~~~~~~~~~~~~~~~~~~~---~--~~~~v~~~~~~pq~---~ll~~~~~~~~I~H----gG~~sv~eal~~G 366 (462)
+.+++ .++.... .....+.+.+ + ..++|.+.+++|+. .+|..+++ +|.- |..++++||+++|
T Consensus 276 ~~~l~-i~G~~~~---~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G 349 (438)
T 3c48_A 276 NLRVI-ICGGPSG---PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASG 349 (438)
T ss_dssp SEEEE-EECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTT
T ss_pred ceEEE-EEeCCCC---CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcC
Confidence 22333 3333100 0011122222 2 24789999999864 58888887 7754 3356899999999
Q ss_pred CceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHH----HHHHHHHHHHHhHhhcCCCc
Q 044266 367 VPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFK----ARALDLKETSLNSVREGGQS 442 (462)
Q Consensus 367 vP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~----~~a~~l~~~~~~~~~~~g~~ 442 (462)
+|+|+.+. ......+++. +.|..++ .-+.++++++|.++++|++.+ +++++..+.+.-. ..
T Consensus 350 ~PvI~~~~----~~~~e~i~~~-~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~-----~~ 414 (438)
T 3c48_A 350 TPVIAARV----GGLPIAVAEG-ETGLLVD-----GHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWA-----AT 414 (438)
T ss_dssp CCEEEESC----TTHHHHSCBT-TTEEEES-----SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-----HH
T ss_pred CCEEecCC----CChhHHhhCC-CcEEECC-----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHH-----HH
Confidence 99999753 3455556653 6788774 358999999999999998644 4444444433211 22
Q ss_pred HHHHHHHHHHHHhh
Q 044266 443 DKTFKNFVQWIKAE 456 (462)
Q Consensus 443 ~~~~~~~~~~~~~~ 456 (462)
.+.+.++.+.+...
T Consensus 415 ~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 415 AAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhh
Confidence 44555555555444
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.45 E-value=1.2e-12 Score=126.21 Aligned_cols=321 Identities=12% Similarity=0.059 Sum_probs=169.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcch----HHHHHhhcCCCCCCCCeEE-EEcCCCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNH----KRVVNALGQNNYIGDQIKL-VSIPDGMEPEGD 75 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~i~~-~~i~~~~~~~~~ 75 (462)
+++||++++ ++.+...=+..|.++|.++ |+++.++.+.... +.+... ++.. +.+. ....
T Consensus 26 ~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~---------~i~~~~~l~----v~~~ 91 (403)
T 3ot5_A 26 AKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF---------DIKPDIDLD----IMKK 91 (403)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT---------TCCCSEECC----CCC-
T ss_pred ccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc---------CCCCCcccc----cCCC
Confidence 456898887 7776777778899999987 6898877665432 223222 3321 1111 1111
Q ss_pred CCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCC--c-chHHHHHHHcCCceEEEccchhHHHHHHHhHhhh
Q 044266 76 RNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGS--M-GWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRF 152 (462)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~--~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~ 152 (462)
..+.... .. .....+.++++. .+||+|++-.. . ..+..+|..+|||++.+....
T Consensus 92 ~~~~~~~---~~-~~~~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl------------- 148 (403)
T 3ot5_A 92 GQTLAEI---TS-RVMNGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL------------- 148 (403)
T ss_dssp CCCHHHH---HH-HHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-------------
T ss_pred CCCHHHH---HH-HHHHHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-------------
Confidence 1233221 11 122234455555 89999997432 2 245678999999987643110
Q ss_pred hcCCCcCCCCCCccccccccCCCCcccCc-ccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhc-c
Q 044266 153 LDDGIVDDNGTPVKQQMIQLAPTMAAIHS-SKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALD-L 230 (462)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~-~ 230 (462)
..+.. ..++ ....... .-+.++.+++.+....+.-... .
T Consensus 149 ------------------------rs~~~~~~~p---------~~~~r~~------~~~~a~~~~~~se~~~~~l~~~Gi 189 (403)
T 3ot5_A 149 ------------------------RTWNKYSPFP---------EEMNRQL------TGVMADIHFSPTKQAKENLLAEGK 189 (403)
T ss_dssp ------------------------CCSCTTSSTT---------HHHHHHH------HHHHCSEEEESSHHHHHHHHHTTC
T ss_pred ------------------------cccccccCCc---------HHHHHHH------HHHhcCEEECCCHHHHHHHHHcCC
Confidence 00000 0000 0000000 0123466666665433321111 1
Q ss_pred -CCCccccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHh-----CCCCEEE
Q 044266 231 -IPEFLPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLEL-----TNRPFLW 304 (462)
Q Consensus 231 -~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~ 304 (462)
..+++.+|....+...... . .....+..+.+ .++++++++.|....... .+..+++++.. .+.++++
T Consensus 190 ~~~~i~vvGn~~~D~~~~~~-~--~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~ 262 (403)
T 3ot5_A 190 DPATIFVTGNTAIDALKTTV-Q--KDYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVY 262 (403)
T ss_dssp CGGGEEECCCHHHHHHHHHS-C--TTCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CcccEEEeCCchHHHHHhhh-h--hhcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEE
Confidence 2367788853221100000 0 00111222222 345688887665322221 23455555432 2345555
Q ss_pred EEcCCCCCcccccCchhHHHH--hcCCceeecccCc---ccccCCCCcccceeccCchhhhhhhhcCCceeccccccchh
Q 044266 305 VVRPDITNDAIDAYPEGFQDR--VATRRQMVGWAPQ---QKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQF 379 (462)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~pq---~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~ 379 (462)
..+++ . .+.+.+.+. ..+++++.+++++ ..+++.+++ +|+-.|..+ .||+++|+|+|+.|-..+++
T Consensus 263 ~~~~~----~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~ 333 (403)
T 3ot5_A 263 PMHLN----P--AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERP 333 (403)
T ss_dssp ECCSC----H--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCH
T ss_pred ecCCC----H--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcch
Confidence 54432 0 011112211 2368889998874 368888887 998875333 69999999999998777765
Q ss_pred hhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHH
Q 044266 380 LNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARAL 426 (462)
Q Consensus 380 ~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~ 426 (462)
.. .+. |.|+.+. .++++|.++|.++++|++.+++..
T Consensus 334 e~----v~~-g~~~lv~------~d~~~l~~ai~~ll~~~~~~~~m~ 369 (403)
T 3ot5_A 334 EG----IEA-GTLKLIG------TNKENLIKEALDLLDNKESHDKMA 369 (403)
T ss_dssp HH----HHH-TSEEECC------SCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hh----eeC-CcEEEcC------CCHHHHHHHHHHHHcCHHHHHHHH
Confidence 42 343 8887773 289999999999999987765543
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.44 E-value=2.7e-11 Score=118.31 Aligned_cols=354 Identities=10% Similarity=-0.002 Sum_probs=177.2
Q ss_pred CCCEEEEEcCC-----CccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH---------hhc--CCCCCCCCeEEEEc
Q 044266 3 RRPHVLAFPYP-----AQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVN---------ALG--QNNYIGDQIKLVSI 66 (462)
Q Consensus 3 ~~~~Il~~~~~-----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~---------~~~--~~~~~~~~i~~~~i 66 (462)
++|||++++.. ..|--.-...||+.|+++||+|+++++......-.. ... -......|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 46899998833 345556789999999999999999996542211000 000 00001137777777
Q ss_pred CCCCCCCC-CCCCHHHH-HHHHHHhccHHHHHHHHHH--hhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEccchh
Q 044266 67 PDGMEPEG-DRNDLGML-TKTMVRVMPEKLEELIENI--NRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWPAAA 140 (462)
Q Consensus 67 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~l~~~l--~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~ 140 (462)
+....... ........ ...+.. ....+..+++.+ +. .+||+|.+..... .+..+++..|+|+|.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 156 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVT-FGRASVLLLNDLLREE---PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLN 156 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTS---CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred cchhccccccccCCcchhhhhhHH-HHHHHHHHHHHHhccC---CCCeEEEecchhhhhhHHHHhhccCCCEEEEecccc
Confidence 65211111 11111111 222211 122233444443 12 7999999886444 345667788999988654332
Q ss_pred HHHHHHHhHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhc--CCCcchhhHHHHHHhhhhhccccEEEEc
Q 044266 141 GLLALSFSVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIG--DFNTQKIVFDFTIDNNETIKKAERLICN 218 (462)
Q Consensus 141 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~n 218 (462)
. ..++.. ......+. .........+ ...+.+|.+++.
T Consensus 157 ~--------------------------------~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~ad~ii~~ 195 (439)
T 3fro_A 157 K--------------------------------SKLPAF---YFHEAGLSELAPYPDIDPEH------TGGYIADIVTTV 195 (439)
T ss_dssp C--------------------------------CCEEHH---HHHHTTCGGGCCSSEECHHH------HHHHHCSEEEES
T ss_pred c--------------------------------ccCchH---HhCccccccccccceeeHhh------hhhhhccEEEec
Confidence 1 000000 00000000 0000000111 134578888888
Q ss_pred Cccccchhhhc----cCCCccccCcccCCCCCC-CCCC-CCCCCCchhhHhhccCCCCcEEEEeccCcc-c-cCHHHHHH
Q 044266 219 STYDLEPGALD----LIPEFLPIGPLLSSNRLG-NSAG-YFWPEDSTCLKWLDQQQQNSVIYVAFGSFT-V-FDKEQFQE 290 (462)
Q Consensus 219 s~~~le~~~~~----~~p~v~~vGp~~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~ 290 (462)
|....+.. .. ...++..+..-....... .... .......++.+-+.- +++ .+++..|+.. . ...+.+..
T Consensus 196 S~~~~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~ 272 (439)
T 3fro_A 196 SRGYLIDE-WGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLK 272 (439)
T ss_dssp CHHHHHHT-HHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHH
T ss_pred CHHHHHHH-hhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHH
Confidence 87654432 12 123444443322111100 0000 000011112222222 223 7778888875 2 23444444
Q ss_pred HHHHHHh----CCCCEEEEEcCCCCCcccc--cCchhHHHHhcCCceeecccCcc---cccCCCCcccceec----cCch
Q 044266 291 LASGLEL----TNRPFLWVVRPDITNDAID--AYPEGFQDRVATRRQMVGWAPQQ---KVLTHPSIACFLSH----CGWN 357 (462)
Q Consensus 291 ~~~a~~~----~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~pq~---~ll~~~~~~~~I~H----gG~~ 357 (462)
.+..+.. .+.++++ ++.+ ... ..-....+..++++.+.+|+|+. .++..+++ +|.- |--+
T Consensus 273 a~~~l~~~~~~~~~~l~i-~G~g----~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~ 345 (439)
T 3fro_A 273 AIEILSSKKEFQEMRFII-IGKG----DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGL 345 (439)
T ss_dssp HHHHHHTSGGGGGEEEEE-ECCC----CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCH
T ss_pred HHHHHHhcccCCCeEEEE-EcCC----ChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccH
Confidence 4444433 2334433 3332 100 00111222334445567999985 47888887 7633 3357
Q ss_pred hhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhc-CHHHH
Q 044266 358 STMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLE-DENFK 422 (462)
Q Consensus 358 sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~ 422 (462)
+++||+++|+|+|+... ......++. |.|..++ .-++++++++|.++++ |++.+
T Consensus 346 ~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~-----~~d~~~la~~i~~ll~~~~~~~ 400 (439)
T 3fro_A 346 VALEAMCLGAIPIASAV----GGLRDIITN--ETGILVK-----AGDPGELANAILKALELSRSDL 400 (439)
T ss_dssp HHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEEC-----TTCHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeC-----CCCHHHHHHHHHHHHhcCHHHH
Confidence 99999999999998743 344444443 6888884 3589999999999998 76433
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.43 E-value=7.2e-13 Score=127.49 Aligned_cols=327 Identities=11% Similarity=0.028 Sum_probs=170.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCCcchH---H-HHHhhcCCCCCCCCeEE-EEcCCCCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH-GVKVTFLNTDYNHK---R-VVNALGQNNYIGDQIKL-VSIPDGMEPEGDR 76 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~---~-v~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~ 76 (462)
+++||++++ ++++...=+..|.++|.++ |+++.++.+....+ . ++.. ++.. +.+. .....
T Consensus 24 ~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~---------~i~~~~~l~----~~~~~ 89 (396)
T 3dzc_A 24 AMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELF---------SITPDFDLN----IMEPG 89 (396)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHT---------TCCCSEECC----CCCTT
T ss_pred CCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhc---------CCCCceeee----cCCCC
Confidence 456888877 7777788888999999987 79997666654432 2 2222 3310 1111 10111
Q ss_pred CCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCC--Cc-chHHHHHHHcCCceEEEccchhHHHHHHHhHhhhh
Q 044266 77 NDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADG--SM-GWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFL 153 (462)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 153 (462)
.+.... .. .....+.++++. .+||+|++-. .. ..+..+|..+|||++.+....
T Consensus 90 ~~~~~~---~~-~~~~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-------------- 145 (396)
T 3dzc_A 90 QTLNGV---TS-KILLGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-------------- 145 (396)
T ss_dssp CCHHHH---HH-HHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC--------------
T ss_pred CCHHHH---HH-HHHHHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc--------------
Confidence 222221 11 122234455555 8999999743 22 244678899999987642210
Q ss_pred cCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhc-c-C
Q 044266 154 DDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALD-L-I 231 (462)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~-~-~ 231 (462)
..+. +. ...... ..+.. ..+.++.+++.+....+.-... . .
T Consensus 146 -----------------------rs~~-------~~-~~~~~~-~~r~~-----~~~~a~~~~~~se~~~~~l~~~G~~~ 188 (396)
T 3dzc_A 146 -----------------------RTGN-------IY-SPWPEE-GNRKL-----TAALTQYHFAPTDTSRANLLQENYNA 188 (396)
T ss_dssp -----------------------CCSC-------TT-SSTTHH-HHHHH-----HHHTCSEEEESSHHHHHHHHHTTCCG
T ss_pred -----------------------cccc-------cc-cCCcHH-HHHHH-----HHHhcCEEECCCHHHHHHHHHcCCCc
Confidence 0000 00 000000 00000 0134567777665433321111 1 1
Q ss_pred CCccccCcccCCCCCCCCCCCCCCCC----chhhHhhcc-CCCCcEEEEeccCccccCHHHHHHHHHHHHhC-----CCC
Q 044266 232 PEFLPIGPLLSSNRLGNSAGYFWPED----STCLKWLDQ-QQQNSVIYVAFGSFTVFDKEQFQELASGLELT-----NRP 301 (462)
Q Consensus 232 p~v~~vGp~~~~~~~~~~~~~~~~~~----~~~~~~l~~-~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~ 301 (462)
.+++.+|....+...... .....+ +++.+.+.- .+++++++++.+....... .+..+++++... +.+
T Consensus 189 ~ki~vvGn~~~d~~~~~~--~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~ 265 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLAVR--EKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQ 265 (396)
T ss_dssp GGEEECCCHHHHHHHHHH--HHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEE
T ss_pred CcEEEECCcHHHHHHHhh--hhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCce
Confidence 357778843221100000 000000 112222221 1345677777633222222 245566665432 445
Q ss_pred EEEEEcCCCCCcccccCchhHHHH--hcCCceeecccCc---ccccCCCCcccceeccCchhhhhhhhcCCceecccccc
Q 044266 302 FLWVVRPDITNDAIDAYPEGFQDR--VATRRQMVGWAPQ---QKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFA 376 (462)
Q Consensus 302 ~i~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~pq---~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~ 376 (462)
+++..+.+ ..+.+.+.+. ..+++++.+++++ ..+|+.+++ +|+-+| |.+.||+++|+|+|+..-..
T Consensus 266 ~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~ 336 (396)
T 3dzc_A 266 ILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETT 336 (396)
T ss_dssp EEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSC
T ss_pred EEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCC
Confidence 55544432 0011122221 2367888887764 368888888 999988 66689999999999986555
Q ss_pred chhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHH
Q 044266 377 DQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALD 427 (462)
Q Consensus 377 DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 427 (462)
+++. +.+. |.++.+. .++++|.++|.++++|++.+++..+
T Consensus 337 ~~~e----~v~~-G~~~lv~------~d~~~l~~ai~~ll~d~~~~~~m~~ 376 (396)
T 3dzc_A 337 ERPE----AVAA-GTVKLVG------TNQQQICDALSLLLTDPQAYQAMSQ 376 (396)
T ss_dssp SCHH----HHHH-TSEEECT------TCHHHHHHHHHHHHHCHHHHHHHHT
T ss_pred cchH----HHHc-CceEEcC------CCHHHHHHHHHHHHcCHHHHHHHhh
Confidence 5432 3443 8776552 2699999999999999876654443
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.42 E-value=2.1e-12 Score=124.10 Aligned_cols=135 Identities=16% Similarity=0.173 Sum_probs=86.9
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCCcccccCchhHHHHh--cCCceeecccCc---
Q 044266 269 QNSVIYVAFGSFTVFDKEQFQELASGLELT-----NRPFLWVVRPDITNDAIDAYPEGFQDRV--ATRRQMVGWAPQ--- 338 (462)
Q Consensus 269 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~pq--- 338 (462)
++++++++.|+..... +.+..+++++... +.++++..+.+ ..+.+.+.+.. .++|.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3567888888754322 2344555555322 34444433322 01112222221 268888777775
Q ss_pred ccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcC
Q 044266 339 QKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLED 418 (462)
Q Consensus 339 ~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~ 418 (462)
..+|+.+++ ||+.+| ++++||+++|+|+|+.+..++.. .+.+. |.|..++ . +++++.++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~----~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVG----T--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEEC----S--SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeC----C--CHHHHHHHHHHHHhC
Confidence 468988888 999985 45889999999999998754433 23443 8888884 2 899999999999999
Q ss_pred HHHHHH
Q 044266 419 ENFKAR 424 (462)
Q Consensus 419 ~~~~~~ 424 (462)
++.+++
T Consensus 343 ~~~~~~ 348 (384)
T 1vgv_A 343 ENEYQA 348 (384)
T ss_dssp HHHHHH
T ss_pred hHHHhh
Confidence 865544
No 32
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.42 E-value=4.4e-12 Score=121.40 Aligned_cols=327 Identities=13% Similarity=0.063 Sum_probs=167.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC-C-CEEEEEeCCcchHHHHHhhcCCCCCCCCeEE-EEcCCCCCCCCCCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKH-G-VKVTFLNTDYNHKRVVNALGQNNYIGDQIKL-VSIPDGMEPEGDRN 77 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~-~~i~~~~~~~~~~~ 77 (462)
|++++||++++ ++.++......++++|+++ | |+|.++++....+........ .++.. ..++...+ ..
T Consensus 5 m~~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~ 74 (375)
T 3beo_A 5 MTERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI-----FGITPDFDLNIMKD----RQ 74 (375)
T ss_dssp CSSCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH-----HTCCCSEECCCCCT----TC
T ss_pred CCcCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH-----cCCCCccccccCCC----cc
Confidence 66678999987 4477888888999999987 5 898877765532222111000 03322 12221110 11
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc---hHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhc
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG---WVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLD 154 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 154 (462)
+.... ... ....+.++++. .+||+|++..... .+..++...|+|++.+.....
T Consensus 75 ~~~~~---~~~-~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-------------- 130 (375)
T 3beo_A 75 TLIDI---TTR-GLEGLDKVMKE------AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLR-------------- 130 (375)
T ss_dssp CHHHH---HHH-HHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCC--------------
T ss_pred cHHHH---HHH-HHHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc--------------
Confidence 21111 111 11223444444 8999999954322 234667889999986422100
Q ss_pred CCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhh-ccC-C
Q 044266 155 DGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGAL-DLI-P 232 (462)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~-~~~-p 232 (462)
....... +. ....+.+ ..+.++.+++.+....+.-.. ... .
T Consensus 131 -----------------~~~~~~~-----~~----------~~~~~~~-----~~~~~d~ii~~s~~~~~~~~~~g~~~~ 173 (375)
T 3beo_A 131 -----------------TWDKYSP-----YP----------EEMNRQL-----TGVMADLHFSPTAKSATNLQKENKDES 173 (375)
T ss_dssp -----------------CSCTTSS-----TT----------HHHHHHH-----HHHHCSEEEESSHHHHHHHHHTTCCGG
T ss_pred -----------------cccccCC-----Ch----------hHhhhhH-----HhhhhheeeCCCHHHHHHHHHcCCCcc
Confidence 0000000 00 0000000 112367777777554332111 111 2
Q ss_pred CccccCcc-cCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHhC---CCCEEEEEcC
Q 044266 233 EFLPIGPL-LSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLELT---NRPFLWVVRP 308 (462)
Q Consensus 233 ~v~~vGp~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~ 308 (462)
++..+|.. ......... .....++..-+ .++++++++.|...... +.+..+++++... ..++.+.++.
T Consensus 174 ~i~vi~n~~~d~~~~~~~----~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~ 245 (375)
T 3beo_A 174 RIFITGNTAIDALKTTVK----ETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPV 245 (375)
T ss_dssp GEEECCCHHHHHHHHHCC----SSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred cEEEECChhHhhhhhhhh----hhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 45556543 110000000 00111222212 23557778888754321 3345566665432 1123233332
Q ss_pred CCCCcccccCchhHHHHhc--CCceeecccCcc---cccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHH
Q 044266 309 DITNDAIDAYPEGFQDRVA--TRRQMVGWAPQQ---KVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNES 383 (462)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~--~~v~~~~~~pq~---~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~ 383 (462)
+. ...+.+.+.+... ++|.+.+++++. .+|+.+++ +|+.+| ++++||+++|+|+|+.+..+...
T Consensus 246 g~----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---- 314 (375)
T 3beo_A 246 HM----NPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---- 314 (375)
T ss_dssp CS----CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----
T ss_pred CC----CHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----
Confidence 20 0111111222223 689898888754 68888888 998874 55889999999999885433332
Q ss_pred hHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHH
Q 044266 384 YICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKAR 424 (462)
Q Consensus 384 ~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 424 (462)
.+.+. |.|..++ . ++++++++|.++++|++.+++
T Consensus 315 e~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~~~~~~ 348 (375)
T 3beo_A 315 EGIEA-GTLKLAG-----T-DEETIFSLADELLSDKEAHDK 348 (375)
T ss_dssp HHHHT-TSEEECC-----S-CHHHHHHHHHHHHHCHHHHHH
T ss_pred eeecC-CceEEcC-----C-CHHHHHHHHHHHHhChHhHhh
Confidence 23343 7888773 2 899999999999999876554
No 33
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.41 E-value=3.3e-12 Score=120.68 Aligned_cols=158 Identities=10% Similarity=0.046 Sum_probs=100.6
Q ss_pred EEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcc---cccCCCCccc
Q 044266 273 IYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQ---KVLTHPSIAC 349 (462)
Q Consensus 273 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~---~ll~~~~~~~ 349 (462)
+++..|+.. ..+....++++++..+.+++++-.+. ....+ ..+.+..+++|.+.+|+|+. .++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 345567754 34456677777776677766553322 11111 12333345899999999975 68888888
Q ss_pred cee--c-----------cC-chhhhhhhhcCCceeccccccchhhhHHhHhh--hheeeEEeecCCCCccCHHHHHHHHH
Q 044266 350 FLS--H-----------CG-WNSTMEGVSNGVPFLCWPYFADQFLNESYICD--IWKVGLRFNKNKNGIITREEIMKKVD 413 (462)
Q Consensus 350 ~I~--H-----------gG-~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~--~~g~g~~~~~~~~~~~~~~~l~~~i~ 413 (462)
+|. . -| -++++||+++|+|+|+... ..+...+++ . +.|..+ .. +.++++++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHH
Confidence 663 2 23 4689999999999999865 345555554 3 566666 34 9999999999
Q ss_pred HHhcCHHHHHHHHHHH-HHHHhHhhcCCCcHHHHHHHHHHHHhhhcc
Q 044266 414 QVLEDENFKARALDLK-ETSLNSVREGGQSDKTFKNFVQWIKAEASV 459 (462)
Q Consensus 414 ~ll~~~~~~~~a~~l~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 459 (462)
++++ .+++++.. +.+.-. ...+.+.++++.+.+..+|
T Consensus 304 ~l~~----~~~~~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~~~ 341 (342)
T 2iuy_A 304 GLPA----SDEVRRAAVRLWGHV-----TIAERYVEQYRRLLAGATW 341 (342)
T ss_dssp TSCC----HHHHHHHHHHHHBHH-----HHHHHHHHHHHHHHTTCCC
T ss_pred HHHH----HHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHccCCC
Confidence 9997 55555443 333321 3355667777777666554
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.39 E-value=6.8e-11 Score=117.73 Aligned_cols=360 Identities=14% Similarity=0.103 Sum_probs=179.3
Q ss_pred CCCCCEEEEEcCC---------------CccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCC--CCCeEE
Q 044266 1 MLRRPHVLAFPYP---------------AQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYI--GDQIKL 63 (462)
Q Consensus 1 ~~~~~~Il~~~~~---------------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~--~~~i~~ 63 (462)
|.++|||++++.. ..|.-.....|++.|.++||+|++++.................. ..++.+
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v 83 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRI 83 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEE
Confidence 4446899998852 35777889999999999999999998754321100000000000 147888
Q ss_pred EEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEccchhH
Q 044266 64 VSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWPAAAG 141 (462)
Q Consensus 64 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 141 (462)
+.++...............+..+ +..+.+.+++.. .+||+|.+..... .+..+++.+|+|+|........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~-~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~ 155 (499)
T 2r60_A 84 VRIPFGGDKFLPKEELWPYLHEY-------VNKIINFYREEG-KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGA 155 (499)
T ss_dssp EEECCSCSSCCCGGGCGGGHHHH-------HHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHH
T ss_pred EEecCCCcCCcCHHHHHHHHHHH-------HHHHHHHHHhcC-CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccc
Confidence 88774321110011111111111 122222232210 4899999875332 3445677889999875554322
Q ss_pred HHHHHHhHhhhhcCCCcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCcc
Q 044266 142 LLALSFSVQRFLDDGIVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTY 221 (462)
Q Consensus 142 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~ 221 (462)
.... .. ...+.. ...+. ..+ + ......-.....+.++.+++.|..
T Consensus 156 ~~~~-----~~-------------------~~~~~~---~~~~~-~~~------~-~~~~~~~~~~~~~~ad~vi~~S~~ 200 (499)
T 2r60_A 156 QKME-----KL-------------------NVNTSN---FKEMD-ERF------K-FHRRIIAERLTMSYADKIIVSTSQ 200 (499)
T ss_dssp HHHH-----TT-------------------CCCSTT---SHHHH-HHH------C-HHHHHHHHHHHHHHCSEEEESSHH
T ss_pred ccch-----hh-------------------ccCCCC---cchhh-hhH------H-HHHHHHHHHHHHhcCCEEEECCHH
Confidence 1000 00 000000 00000 000 0 000000011234678999998876
Q ss_pred ccchhhhc--c-------C-CCccccCcccCCCCCCCCCCCCCCCC----chhhHhhc-----cCCCCcEEEEeccCccc
Q 044266 222 DLEPGALD--L-------I-PEFLPIGPLLSSNRLGNSAGYFWPED----STCLKWLD-----QQQQNSVIYVAFGSFTV 282 (462)
Q Consensus 222 ~le~~~~~--~-------~-p~v~~vGp~~~~~~~~~~~~~~~~~~----~~~~~~l~-----~~~~~~~v~vs~Gs~~~ 282 (462)
..+.-... + . .++..|..-....... .... .++.+-+. ... +..+++..|+..
T Consensus 201 ~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~------~~~~~~~~~~~r~~~~~~~~~~~~-~~~~i~~vGrl~- 272 (499)
T 2r60_A 201 ERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFD------GEYGDKIKAKITKYLERDLGSERM-ELPAIIASSRLD- 272 (499)
T ss_dssp HHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSS------SCCCHHHHHHHHHHHHHHSCGGGT-TSCEEEECSCCC-
T ss_pred HHHHHHhhhcccccccccCCCCeEEECCCcChhhcC------ccchhhhHHHHHHHhcccccccCC-CCcEEEEeecCc-
Confidence 54421111 1 1 2344443222111110 0111 22222222 112 235667778764
Q ss_pred cCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCC-cccccC-------chhHHH---H--hcCCceeecccCcc---cc
Q 044266 283 FDKEQFQELASGLELTNR----P-FLWVVRPDITN-DAIDAY-------PEGFQD---R--VATRRQMVGWAPQQ---KV 341 (462)
Q Consensus 283 ~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~-~~~~~~-------~~~~~~---~--~~~~v~~~~~~pq~---~l 341 (462)
..+.+..+++++..... . .++.++..... .+...+ .+.+.+ + +.++|.+.+++|+. .+
T Consensus 273 -~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~ 351 (499)
T 2r60_A 273 -QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGC 351 (499)
T ss_dssp -GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHH
T ss_pred -cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHH
Confidence 33445666777655421 2 34555542000 000001 122221 1 24789999999865 57
Q ss_pred cCCC----Ccccceec----cCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHH
Q 044266 342 LTHP----SIACFLSH----CGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVD 413 (462)
Q Consensus 342 l~~~----~~~~~I~H----gG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~ 413 (462)
|+.+ ++ +|.- |--.+++||+++|+|+|+... ......+.+. +.|..++. -+.++++++|.
T Consensus 352 ~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-----~d~~~la~~i~ 419 (499)
T 2r60_A 352 YAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-----EDPEDIARGLL 419 (499)
T ss_dssp HHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-----TCHHHHHHHHH
T ss_pred HHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-----CCHHHHHHHHH
Confidence 8787 77 7632 334689999999999998853 3444555552 57888843 58999999999
Q ss_pred HHhcCHHHHHH
Q 044266 414 QVLEDENFKAR 424 (462)
Q Consensus 414 ~ll~~~~~~~~ 424 (462)
++++|++.+++
T Consensus 420 ~ll~~~~~~~~ 430 (499)
T 2r60_A 420 KAFESEETWSA 430 (499)
T ss_dssp HHHSCHHHHHH
T ss_pred HHHhCHHHHHH
Confidence 99999865443
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.38 E-value=2.6e-11 Score=117.30 Aligned_cols=313 Identities=12% Similarity=0.105 Sum_probs=164.0
Q ss_pred CCCEEEEEcCC---C-ccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCC
Q 044266 3 RRPHVLAFPYP---A-QGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRND 78 (462)
Q Consensus 3 ~~~~Il~~~~~---~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 78 (462)
++|||+++... . .|.-.....+++.|.++||+|++++.............. .+ .++.++.. . .
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~-----~~-~~~~~~~~----~---~ 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVS-----GG-KAVPIPYN----G---S 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEE-----CC-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccccc-----CC-cEEecccc----C---C
Confidence 47899988742 2 566688999999999999999999987543211110000 01 11111100 0 0
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCC
Q 044266 79 LGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDG 156 (462)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 156 (462)
... + ......+..+.+.++. .+||+|++..... .+..+++..|+|++.........
T Consensus 86 ~~~-~----~~~~~~~~~l~~~l~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------------- 143 (406)
T 2gek_A 86 VAR-L----RFGPATHRKVKKWIAE---GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK-------------- 143 (406)
T ss_dssp ----------CCHHHHHHHHHHHHH---HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS--------------
T ss_pred ccc-c----cccHHHHHHHHHHHHh---cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh--------------
Confidence 000 0 0001112233333333 7999999876544 34566777899999854432100
Q ss_pred CcCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhh-hhhccccEEEEcCccccchhhhccC-CCc
Q 044266 157 IVDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNN-ETIKKAERLICNSTYDLEPGALDLI-PEF 234 (462)
Q Consensus 157 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ns~~~le~~~~~~~-p~v 234 (462)
.... . .+.... ...+.++.+++.+....+.-...+. +++
T Consensus 144 -------------------------~~~~-~-------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~ 184 (406)
T 2gek_A 144 -------------------------SLTL-S-------------VFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAV 184 (406)
T ss_dssp -------------------------HHHH-H-------------HHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSSCEE
T ss_pred -------------------------hhhH-H-------------HHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcE
Confidence 0000 0 000000 2345677777777654443211111 233
Q ss_pred cccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCc-cccCHHHHHHHHHHHHhC-----CCCEEEEEcC
Q 044266 235 LPIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSF-TVFDKEQFQELASGLELT-----NRPFLWVVRP 308 (462)
Q Consensus 235 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~ 308 (462)
.+........... ...... +. . ...+++..|+. .. .+.+..+++++... +.+++ .++.
T Consensus 185 -vi~~~v~~~~~~~-----~~~~~~----~~--~-~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~-i~G~ 248 (406)
T 2gek_A 185 -EIPNGVDVASFAD-----APLLDG----YP--R-EGRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEIL-IVGR 248 (406)
T ss_dssp -ECCCCBCHHHHHT-----CCCCTT----CS--C-SSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEE-EESC
T ss_pred -EecCCCChhhcCC-----Cchhhh----cc--C-CCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEE-EEcC
Confidence 3332211000000 000000 00 1 12466667776 32 22334444444322 33443 3443
Q ss_pred CCCCcccccCchhHHHH---hcCCceeecccCcc---cccCCCCcccceec----cCc-hhhhhhhhcCCceeccccccc
Q 044266 309 DITNDAIDAYPEGFQDR---VATRRQMVGWAPQQ---KVLTHPSIACFLSH----CGW-NSTMEGVSNGVPFLCWPYFAD 377 (462)
Q Consensus 309 ~~~~~~~~~~~~~~~~~---~~~~v~~~~~~pq~---~ll~~~~~~~~I~H----gG~-~sv~eal~~GvP~l~~P~~~D 377 (462)
+ .. +.+.+. ..+++.+.+++|+. .+|..+++ +|.- .|+ ++++||+++|+|+|+.+.
T Consensus 249 ~----~~----~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~--- 315 (406)
T 2gek_A 249 G----DE----DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL--- 315 (406)
T ss_dssp S----CH----HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC---
T ss_pred C----cH----HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC---
Confidence 3 11 222222 25789999999975 68888888 6643 344 489999999999999855
Q ss_pred hhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHH
Q 044266 378 QFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARA 425 (462)
Q Consensus 378 Q~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a 425 (462)
......+.+. +.|..++ .-+.+++.++|.++++|++.+++.
T Consensus 316 -~~~~e~i~~~-~~g~~~~-----~~d~~~l~~~i~~l~~~~~~~~~~ 356 (406)
T 2gek_A 316 -DAFRRVLADG-DAGRLVP-----VDDADGMAAALIGILEDDQLRAGY 356 (406)
T ss_dssp -HHHHHHHTTT-TSSEECC-----TTCHHHHHHHHHHHHHCHHHHHHH
T ss_pred -CcHHHHhcCC-CceEEeC-----CCCHHHHHHHHHHHHcCHHHHHHH
Confidence 4455666653 6777774 258999999999999998755443
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.37 E-value=7e-10 Score=106.81 Aligned_cols=320 Identities=11% Similarity=0.076 Sum_probs=167.0
Q ss_pred CCEEEEEcCCCc-cChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHH
Q 044266 4 RPHVLAFPYPAQ-GHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGML 82 (462)
Q Consensus 4 ~~~Il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 82 (462)
+.++....+|.. |.-.-...|++.|+++||+|++++....... .. ..+++.+..++....... ......
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~-------~~~~i~~~~~~~~~~~~~-~~~~~~- 84 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-NK-------VYPNIYFHEVTVNQYSVF-QYPPYD- 84 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC----C-CSCCHH-
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-cc-------cCCceEEEeccccccccc-cccccc-
Confidence 457776666654 6667888999999999999999998643221 11 113677766552111000 000010
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc---CCceEEEccchhHHHHHHHhHhhhhcCCC
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG--WVMEVAEKM---KLRRAAFWPAAAGLLALSFSVQRFLDDGI 157 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l---giP~v~~~~~~~~~~~~~~~~p~~~~~~~ 157 (462)
+. ....+.++++. .+||+|++..... ....++..+ ++|++.........
T Consensus 85 ~~-----~~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--------------- 138 (394)
T 2jjm_A 85 LA-----LASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--------------- 138 (394)
T ss_dssp HH-----HHHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH---------------
T ss_pred HH-----HHHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc---------------
Confidence 00 11223344444 8999999875433 233344443 59988755432110
Q ss_pred cCCCCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhcc--CCCcc
Q 044266 158 VDDNGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALDL--IPEFL 235 (462)
Q Consensus 158 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~~--~p~v~ 235 (462)
. .+.. ... ....+ ...+.++.+++.+....+.-...+ ..++.
T Consensus 139 --------------~-~~~~--------------~~~-~~~~~------~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~ 182 (394)
T 2jjm_A 139 --------------V-LGSD--------------PSL-NNLIR------FGIEQSDVVTAVSHSLINETHELVKPNKDIQ 182 (394)
T ss_dssp --------------T-TTTC--------------TTT-HHHHH------HHHHHSSEEEESCHHHHHHHHHHTCCSSCEE
T ss_pred --------------c-cCCC--------------HHH-HHHHH------HHHhhCCEEEECCHHHHHHHHHhhCCcccEE
Confidence 0 0000 000 00001 124568888888866544321111 23555
Q ss_pred ccCcccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccCHHHHHHHHHHHHh----CCCCEEEEEcCCCC
Q 044266 236 PIGPLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFDKEQFQELASGLEL----TNRPFLWVVRPDIT 311 (462)
Q Consensus 236 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~~~~~i~~~~~~~~ 311 (462)
.++......... .....++.+-+.-. ++..+++..|+... .+.+..++++++. .+.+++ .++.+.
T Consensus 183 vi~ngv~~~~~~------~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~- 251 (394)
T 2jjm_A 183 TVYNFIDERVYF------KRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLL-LVGDGP- 251 (394)
T ss_dssp ECCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEE-EECCCT-
T ss_pred EecCCccHHhcC------CcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEE-EECCch-
Confidence 554332221111 01112222222211 23356666787642 2233344444422 234443 344331
Q ss_pred CcccccCchhHHHH-----hcCCceeecccCc-ccccCCCCcccce----eccCchhhhhhhhcCCceeccccccchhhh
Q 044266 312 NDAIDAYPEGFQDR-----VATRRQMVGWAPQ-QKVLTHPSIACFL----SHCGWNSTMEGVSNGVPFLCWPYFADQFLN 381 (462)
Q Consensus 312 ~~~~~~~~~~~~~~-----~~~~v~~~~~~pq-~~ll~~~~~~~~I----~HgG~~sv~eal~~GvP~l~~P~~~DQ~~n 381 (462)
..+.+.+. ..++|.+.++..+ ..+|..+++ +| .-|..++++||+++|+|+|+.+.. ..
T Consensus 252 ------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~ 319 (394)
T 2jjm_A 252 ------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GI 319 (394)
T ss_dssp ------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TS
T ss_pred ------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----Ch
Confidence 11222221 1367888887554 368888887 77 556677999999999999987643 33
Q ss_pred HHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHH
Q 044266 382 ESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKAR 424 (462)
Q Consensus 382 a~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 424 (462)
...+++. +.|..++. -+.++++++|.++++|++.+++
T Consensus 320 ~e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~~ 356 (394)
T 2jjm_A 320 PEVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHRN 356 (394)
T ss_dssp TTTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHH
Confidence 3444542 57777742 4899999999999999865443
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.22 E-value=3.1e-09 Score=101.29 Aligned_cols=145 Identities=13% Similarity=0.224 Sum_probs=93.6
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCCcccccCchhHHHHh--cCCceeecccCc-ccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNR----P-FLWVVRPDITNDAIDAYPEGFQDRV--ATRRQMVGWAPQ-QKV 341 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~pq-~~l 341 (462)
+..+++..|+.. ..+....+++++..... . -++.++.+ ....+ ....+.. .+++.+.++..+ ..+
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQD----KPRKF-EALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSS----CCHHH-HHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCC----CHHHH-HHHHHHcCCCCcEEECCCcccHHHH
Confidence 346777788764 33445666777765432 2 23344433 11111 1111222 468888888654 368
Q ss_pred cCCCCccccee----ccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhc
Q 044266 342 LTHPSIACFLS----HCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLE 417 (462)
Q Consensus 342 l~~~~~~~~I~----HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~ 417 (462)
+..+++ +|. -|..++++||+++|+|+|+.+. ..+...+++. +.|..++ ..-+.+++.++|.++++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~l~~ 336 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA----EPFSQEQLNEVLRKALT 336 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHHHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC----CCCCHHHHHHHHHHHHc
Confidence 888887 775 5667899999999999999754 3455667774 8898884 23689999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 044266 418 DENFKARALDLKETS 432 (462)
Q Consensus 418 ~~~~~~~a~~l~~~~ 432 (462)
|++.+++..+-+.+.
T Consensus 337 ~~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 337 QSPLRMAWAENARHY 351 (374)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 987655444433333
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.20 E-value=1.5e-09 Score=105.33 Aligned_cols=85 Identities=12% Similarity=0.021 Sum_probs=63.8
Q ss_pred cCCceeecccC---c---ccccCCCCcccceecc----CchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEee
Q 044266 327 ATRRQMVGWAP---Q---QKVLTHPSIACFLSHC----GWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFN 396 (462)
Q Consensus 327 ~~~v~~~~~~p---q---~~ll~~~~~~~~I~Hg----G~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~ 396 (462)
.++|.+.+|++ + ..+++.+++ +|.-. ..++++||+++|+|+|+.+. ..+...+++. +.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEE-
Confidence 47899998876 2 257878887 77544 45689999999999999754 3455566653 677777
Q ss_pred cCCCCccCHHHHHHHHHHHhcCHHHHHHH
Q 044266 397 KNKNGIITREEIMKKVDQVLEDENFKARA 425 (462)
Q Consensus 397 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~a 425 (462)
. +.++++++|.++++|++.+++.
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~~ 386 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKEM 386 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHHH
Confidence 3 7899999999999998655443
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.17 E-value=1.1e-10 Score=111.34 Aligned_cols=319 Identities=15% Similarity=0.095 Sum_probs=167.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchH-HHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHK-RVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGML 82 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 82 (462)
+.|++++. |++-.+.=+.+|.++|.++ +++.++.+....+ .+....- .++.. .-|+ +.-+....+..+.
T Consensus 9 ~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i-~~~~-~~l~~~~~~~~~~ 78 (385)
T 4hwg_A 9 MLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGI-RKPD-YFLEVAADNTAKS 78 (385)
T ss_dssp CCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCC-CCCS-EECCCCCCCSHHH
T ss_pred hhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCC-CCCc-eecCCCCCCHHHH
Confidence 45776665 8888888899999999877 9988888876543 2222100 12221 0111 1111111222222
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCC--CcchHHHHHHHcCCceEEEccchhHHHHHHHhHhhhhcCCCcCC
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADG--SMGWVMEVAEKMKLRRAAFWPAAAGLLALSFSVQRFLDDGIVDD 160 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~--~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (462)
... +...+.++++. .+||+|++-. ...++..+|.++|||++.+...
T Consensus 79 ~~~----~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag---------------------- 126 (385)
T 4hwg_A 79 IGL----VIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG---------------------- 126 (385)
T ss_dssp HHH----HHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC----------------------
T ss_pred HHH----HHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC----------------------
Confidence 211 22335555555 8999998743 3344578899999997754211
Q ss_pred CCCCccccccccCCCCcccCcccchhhhhcCCCcchhhHHHHHHhhhhhccccEEEEcCccccchhhhc-c-CCCccccC
Q 044266 161 NGTPVKQQMIQLAPTMAAIHSSKLVWACIGDFNTQKIVFDFTIDNNETIKKAERLICNSTYDLEPGALD-L-IPEFLPIG 238 (462)
Q Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~~~le~~~~~-~-~p~v~~vG 238 (462)
+..+.. .++ ........ -+.++.+++.+...-+.-... . ..+++.+|
T Consensus 127 ---------------lrs~~~-~~p---------ee~nR~~~------~~~a~~~~~~te~~~~~l~~~G~~~~~I~vtG 175 (385)
T 4hwg_A 127 ---------------NRCFDQ-RVP---------EEINRKII------DHISDVNITLTEHARRYLIAEGLPAELTFKSG 175 (385)
T ss_dssp ---------------CCCSCT-TST---------HHHHHHHH------HHHCSEEEESSHHHHHHHHHTTCCGGGEEECC
T ss_pred ---------------Cccccc-cCc---------HHHHHHHH------HhhhceeecCCHHHHHHHHHcCCCcCcEEEEC
Confidence 000000 000 00000000 123455666554432221011 1 13577777
Q ss_pred cccCCCCCCCCCCCCCCCCchhhHhhccCCCCcEEEEeccCccccC-HHHHHHHHHHHHhC----CCCEEEEEcCCCCCc
Q 044266 239 PLLSSNRLGNSAGYFWPEDSTCLKWLDQQQQNSVIYVAFGSFTVFD-KEQFQELASGLELT----NRPFLWVVRPDITND 313 (462)
Q Consensus 239 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~ 313 (462)
....+...... ......++.+.+.-. +++.++++.|...... .+.+..+++++... +.++|+...+.
T Consensus 176 np~~D~~~~~~---~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---- 247 (385)
T 4hwg_A 176 SHMPEVLDRFM---PKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---- 247 (385)
T ss_dssp CSHHHHHHHHH---HHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----
T ss_pred CchHHHHHHhh---hhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----
Confidence 43221100000 000011222333322 2568888888753322 23455666666432 55666654321
Q ss_pred ccccCchhHHHH---h--cCCceeecccCc---ccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhH
Q 044266 314 AIDAYPEGFQDR---V--ATRRQMVGWAPQ---QKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYI 385 (462)
Q Consensus 314 ~~~~~~~~~~~~---~--~~~v~~~~~~pq---~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v 385 (462)
..+.+.+. . .+|+++.+.+++ ..+|+++++ +|+-.|. .+.||...|+|+|+++...+.+. .+
T Consensus 248 ----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v 317 (385)
T 4hwg_A 248 ----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM 317 (385)
T ss_dssp ----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH
T ss_pred ----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh
Confidence 11111111 1 256777666654 468988888 9999876 46999999999999987654222 23
Q ss_pred hhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHH
Q 044266 386 CDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENF 421 (462)
Q Consensus 386 ~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 421 (462)
+. |.++.+. .++++|.+++.++++|+..
T Consensus 318 -~~-G~~~lv~------~d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 318 -DA-GTLIMSG------FKAERVLQAVKTITEEHDN 345 (385)
T ss_dssp -HH-TCCEECC------SSHHHHHHHHHHHHTTCBT
T ss_pred -hc-CceEEcC------CCHHHHHHHHHHHHhChHH
Confidence 43 8777663 3899999999999998753
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.96 E-value=3.1e-08 Score=102.43 Aligned_cols=141 Identities=10% Similarity=0.091 Sum_probs=81.3
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCCccc----ccCchhHH---HH--hcCCceeeccc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELTN-----RPFLWVVRPDITNDAI----DAYPEGFQ---DR--VATRRQMVGWA 336 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~~~----~~~~~~~~---~~--~~~~v~~~~~~ 336 (462)
..+++..|... ..+.+..+++|+.... .+++++ +.+.+.... ....+.+. ++ +.++|.+.++.
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIv-G~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVV-GGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEE-CCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEE-eCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 35677788764 3344566666665442 344444 433110000 00001111 11 24778888855
Q ss_pred C----cccccC----CCCcccceec----cCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccC
Q 044266 337 P----QQKVLT----HPSIACFLSH----CGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIIT 404 (462)
Q Consensus 337 p----q~~ll~----~~~~~~~I~H----gG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~ 404 (462)
+ +.++.. .+++ +|.- |-..+++||+++|+|+|+. |.......+.+. +.|..++. -+
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-----~D 716 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-----YH 716 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-----TS
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-----CC
Confidence 4 344433 4556 6643 3456999999999999996 444455556653 67888843 58
Q ss_pred HHHHHHHHHHHh----cCHHHHHHHH
Q 044266 405 REEIMKKVDQVL----EDENFKARAL 426 (462)
Q Consensus 405 ~~~l~~~i~~ll----~~~~~~~~a~ 426 (462)
+++++++|.+++ .|++.+++..
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~~~~~~m~ 742 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDPSHWDEIS 742 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 899999997776 7876554433
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.96 E-value=5.2e-08 Score=96.38 Aligned_cols=133 Identities=10% Similarity=0.095 Sum_probs=81.3
Q ss_pred EEEEeccCccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCcccccCchh---HHHHhcCCce-eecccCcc---cc
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGLE---LTNRPFLWVVRPDITNDAIDAYPEG---FQDRVATRRQ-MVGWAPQQ---KV 341 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~v~-~~~~~pq~---~l 341 (462)
.+++..|+... .+.+..+++++. +.+.+++++-.+. . ...+. +.+..++++. +.++ ++. .+
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~----~--~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGD----V--ALEGALLAAASRHHGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBC----H--HHHHHHHHHHHHTTTTEEEEESC-CHHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCc----h--HHHHHHHHHHHhCCCcEEEecCC-CHHHHHHH
Confidence 47777888743 233344444442 3355665554321 0 01112 2223357887 6788 543 57
Q ss_pred cCCCCcccceec----cCchhhhhhhhcCCceeccccccchhhhHHhHhhhh---------eeeEEeecCCCCccCHHHH
Q 044266 342 LTHPSIACFLSH----CGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIW---------KVGLRFNKNKNGIITREEI 408 (462)
Q Consensus 342 l~~~~~~~~I~H----gG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------g~g~~~~~~~~~~~~~~~l 408 (462)
++.+++ +|.- |--.+++||+++|+|+|+... ......+.+ - +.|..++ .-+++++
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~l 430 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFS-----PVTLDGL 430 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEES-----SCSHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeC-----CCCHHHH
Confidence 888887 7732 445689999999999999754 334444443 2 4677774 3589999
Q ss_pred HHHHHHHh---cCHHHHHHH
Q 044266 409 MKKVDQVL---EDENFKARA 425 (462)
Q Consensus 409 ~~~i~~ll---~~~~~~~~a 425 (462)
+++|.+++ +|++.+++.
T Consensus 431 a~~i~~ll~~~~~~~~~~~~ 450 (485)
T 1rzu_A 431 KQAIRRTVRYYHDPKLWTQM 450 (485)
T ss_dssp HHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 99999999 788655443
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.90 E-value=1.7e-07 Score=92.75 Aligned_cols=135 Identities=10% Similarity=0.135 Sum_probs=81.0
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHH---hCCCCEEEEEcCCCCCcccccCchhH---HHHhcCCce-eecccCc--ccc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLE---LTNRPFLWVVRPDITNDAIDAYPEGF---QDRVATRRQ-MVGWAPQ--QKV 341 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~v~-~~~~~pq--~~l 341 (462)
..+++..|+... .+.+..+++++. +.+.+++++..+. ....+.+ .+..++++. +.++... ..+
T Consensus 292 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 292 VPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp SCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHH
T ss_pred CeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHH
Confidence 356667777642 233444444443 2356665554321 0011222 223346786 6788333 257
Q ss_pred cCCCCcccceec----cCchhhhhhhhcCCceeccccccchhhhHHhHhhhh---------eeeEEeecCCCCccCHHHH
Q 044266 342 LTHPSIACFLSH----CGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIW---------KVGLRFNKNKNGIITREEI 408 (462)
Q Consensus 342 l~~~~~~~~I~H----gG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------g~g~~~~~~~~~~~~~~~l 408 (462)
|+.+++ +|.- |.-.+++||+++|+|+|+... ..+...+.+ - +.|..++ .-+++++
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~l 431 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFE-----DSNAWSL 431 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEEC-----SSSHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEEC-----CCCHHHH
Confidence 888887 7632 345688999999999998754 334444443 2 4777774 3589999
Q ss_pred HHHHHHHh---cCHHHHHHH
Q 044266 409 MKKVDQVL---EDENFKARA 425 (462)
Q Consensus 409 ~~~i~~ll---~~~~~~~~a 425 (462)
+++|.+++ +|++.+++.
T Consensus 432 a~~i~~ll~~~~~~~~~~~~ 451 (485)
T 2qzs_A 432 LRAIRRAFVLWSRPSLWRFV 451 (485)
T ss_dssp HHHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHH
Confidence 99999999 788655443
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.83 E-value=4.5e-06 Score=84.15 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=64.6
Q ss_pred CCceeecccCcc---cccCCCCccccee---ccCchhhhhhhhcCCceeccccc---cchhhhHHhHhhhheeeEEeecC
Q 044266 328 TRRQMVGWAPQQ---KVLTHPSIACFLS---HCGWNSTMEGVSNGVPFLCWPYF---ADQFLNESYICDIWKVGLRFNKN 398 (462)
Q Consensus 328 ~~v~~~~~~pq~---~ll~~~~~~~~I~---HgG~~sv~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~g~g~~~~~~ 398 (462)
++|++.+++|+. .++..+|+ ||. .|+.++++||+++|+|+|++|-. .|.. +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~--~~~l~~-~g~~e~v~-- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVA--GSLNHH-LGLDEMNV-- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHH--HHHHHH-HTCGGGBC--
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHH--HHHHHH-CCChhhhc--
Confidence 678999999854 57888887 662 26777999999999999997642 2221 334444 46665553
Q ss_pred CCCccCHHHHHHHHHHHhcCHHHHHHHHH
Q 044266 399 KNGIITREEIMKKVDQVLEDENFKARALD 427 (462)
Q Consensus 399 ~~~~~~~~~l~~~i~~ll~~~~~~~~a~~ 427 (462)
. +++++.++|.++++|++.+++..+
T Consensus 507 --~--~~~~la~~i~~l~~~~~~~~~~~~ 531 (568)
T 2vsy_A 507 --A--DDAAFVAKAVALASDPAALTALHA 531 (568)
T ss_dssp --S--SHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred --C--CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 2 899999999999999976554433
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.71 E-value=1.1e-06 Score=84.87 Aligned_cols=140 Identities=9% Similarity=0.060 Sum_probs=81.6
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCCcccccCchhHHH---H--hcCC-------ceee
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLEL-----TNRPFLWVVRPDITNDAIDAYPEGFQD---R--VATR-------RQMV 333 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~---~--~~~~-------v~~~ 333 (462)
..+++..|+... .+.+..+++++.. .+.+++++..+.... ...+...+.+ . +.++ +.+.
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~--~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHES--KFDLHSIALRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTC--SCCHHHHHHHHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccc--hhhHHHHHHHHHHHcCcccccccccceeecc
Confidence 477788888532 2334444444433 356666665443110 0001122211 1 2333 5567
Q ss_pred cccCcc---cccCCCCccccee----ccCchhhhhhhhcCCceeccccccchhhhHHhHhhhhee---------------
Q 044266 334 GWAPQQ---KVLTHPSIACFLS----HCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKV--------------- 391 (462)
Q Consensus 334 ~~~pq~---~ll~~~~~~~~I~----HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~--------------- 391 (462)
+|+|+. .+|..+++ +|. -|...+++||+++|+|+|+... ......+.+ |.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~--~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSG--DCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCT--TTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHcc--Ccccccccccccccccc
Confidence 999954 47888887 663 2334589999999999998653 233333333 22
Q ss_pred -eE--EeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHH
Q 044266 392 -GL--RFNKNKNGIITREEIMKKVDQVLEDENFKARALDL 428 (462)
Q Consensus 392 -g~--~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l 428 (462)
|. .+.. -+.++++++| ++++|++.+++..+-
T Consensus 332 ~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~ 365 (413)
T 3oy2_A 332 DGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKR 365 (413)
T ss_dssp CSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHH
T ss_pred cCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHH
Confidence 44 5532 4899999999 999998765544433
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.65 E-value=5.3e-08 Score=82.25 Aligned_cols=140 Identities=9% Similarity=0.078 Sum_probs=91.6
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCcccccCchhH---HHHhcCCceeecccCc---ccccCC
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGLELT-NRPFLWVVRPDITNDAIDAYPEGF---QDRVATRRQMVGWAPQ---QKVLTH 344 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~pq---~~ll~~ 344 (462)
.+++..|+.. ..+.+..++++++.. +.+++++.... . ...+..-. ....++|+.+.+|+|+ ..++..
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~-~---~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS-K---GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC-T---TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc-c---HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 4456677764 334566777777665 45665554322 1 11111111 1124579999999997 468888
Q ss_pred CCccccee---ccCc-hhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHH
Q 044266 345 PSIACFLS---HCGW-NSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDEN 420 (462)
Q Consensus 345 ~~~~~~I~---HgG~-~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 420 (462)
+++ +|. +.|+ .+++||+++|+|+|+... ..+...+++. +.|..+ . -+.+++.++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 888 775 3344 499999999999998753 4555556653 577766 3 489999999999999886
Q ss_pred H-HHHHHHHHH
Q 044266 421 F-KARALDLKE 430 (462)
Q Consensus 421 ~-~~~a~~l~~ 430 (462)
. ++++++.++
T Consensus 165 ~~~~~~~~~a~ 175 (177)
T 2f9f_A 165 KFKKDCFRRAK 175 (177)
T ss_dssp TTHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 4 666655443
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.61 E-value=2.2e-06 Score=81.55 Aligned_cols=92 Identities=14% Similarity=0.213 Sum_probs=63.9
Q ss_pred CceeecccCc-ccccCCCCcccceec-----cCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCc
Q 044266 329 RRQMVGWAPQ-QKVLTHPSIACFLSH-----CGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGI 402 (462)
Q Consensus 329 ~v~~~~~~pq-~~ll~~~~~~~~I~H-----gG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~ 402 (462)
++.+.++..+ ..+++.+|+ ++.- +|..+++||+++|+|+|+-|...+.......+.+. |.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-------
Confidence 4555555444 358877776 6542 24478999999999999877777666666655553 777666
Q ss_pred cCHHHHHHHHHHHhcCHH----HHHHHHHHHHH
Q 044266 403 ITREEIMKKVDQVLEDEN----FKARALDLKET 431 (462)
Q Consensus 403 ~~~~~l~~~i~~ll~~~~----~~~~a~~l~~~ 431 (462)
-++++|+++|.++++| + +.+++++..+.
T Consensus 331 ~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 331 KNETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 2789999999999988 5 45555554443
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.60 E-value=3.5e-06 Score=81.08 Aligned_cols=76 Identities=11% Similarity=0.084 Sum_probs=58.7
Q ss_pred cCCceeecccCcc---cccCCCCccccee---ccC-chhhhhhh-------hcCCceeccccccchhhhHHhHhhhheee
Q 044266 327 ATRRQMVGWAPQQ---KVLTHPSIACFLS---HCG-WNSTMEGV-------SNGVPFLCWPYFADQFLNESYICDIWKVG 392 (462)
Q Consensus 327 ~~~v~~~~~~pq~---~ll~~~~~~~~I~---HgG-~~sv~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~g~g 392 (462)
.+||.+.+++|+. .+++.+++ +|. +.| .++++||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5789999999965 57888888 663 234 45789999 99999999754 5553 567
Q ss_pred EE-eecCCCCccCHHHHHHHHHHHhcCHH
Q 044266 393 LR-FNKNKNGIITREEIMKKVDQVLEDEN 420 (462)
Q Consensus 393 ~~-~~~~~~~~~~~~~l~~~i~~ll~~~~ 420 (462)
.. ++. -++++++++|.++++|++
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 76 642 589999999999998875
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.00 E-value=5.1e-05 Score=62.72 Aligned_cols=131 Identities=13% Similarity=0.283 Sum_probs=79.8
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCC--CCE-EEEEcCCCCCcccccCchhH---HHHhcCCceeecccCcc---cc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELTN--RPF-LWVVRPDITNDAIDAYPEGF---QDRVATRRQMVGWAPQQ---KV 341 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~pq~---~l 341 (462)
+++++..|+.. ..+....+++++.... .++ ++.++.+ ...+.+ .+..+.++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g-------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKG-------PDEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCS-------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCC-------ccHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 47788888864 3445667777776553 133 2333332 111222 2233447888 999964 58
Q ss_pred cCCCCccccee----ccCchhhhhhhhcCC-ceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHh
Q 044266 342 LTHPSIACFLS----HCGWNSTMEGVSNGV-PFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVL 416 (462)
Q Consensus 342 l~~~~~~~~I~----HgG~~sv~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll 416 (462)
+..+++ +|. -|...+++||+++|+ |+|+....+ .....+.+. +. .+ ..-+.+++.++|.+++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~-----~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LF-----EPNNAKDLSAKIDWWL 138 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EE-----CTTCHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EE-----cCCCHHHHHHHHHHHH
Confidence 888887 775 244569999999996 999933211 122222331 33 33 2258999999999999
Q ss_pred cCHHHHHH
Q 044266 417 EDENFKAR 424 (462)
Q Consensus 417 ~~~~~~~~ 424 (462)
+|++.+++
T Consensus 139 ~~~~~~~~ 146 (166)
T 3qhp_A 139 ENKLERER 146 (166)
T ss_dssp HCHHHHHH
T ss_pred hCHHHHHH
Confidence 99865443
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.86 E-value=0.00017 Score=74.39 Aligned_cols=172 Identities=14% Similarity=0.139 Sum_probs=109.5
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHH------hcCCceeecccCccc---
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDR------VATRRQMVGWAPQQK--- 340 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~pq~~--- 340 (462)
..++|.+|.+..+..++.+..-.+-|++.+--++|....... ...++.+. .++++.+.+..|..+
T Consensus 522 ~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~------~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 522 DAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV------GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp TSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG------GHHHHHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH------HHHHHHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 459999999999999999888888888888888888765411 11222221 135677888888653
Q ss_pred ccCCCCccccee---ccCchhhhhhhhcCCceeccccc-cchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHh
Q 044266 341 VLTHPSIACFLS---HCGWNSTMEGVSNGVPFLCWPYF-ADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVL 416 (462)
Q Consensus 341 ll~~~~~~~~I~---HgG~~sv~eal~~GvP~l~~P~~-~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll 416 (462)
.+..+|+ ++- .+|.+|+.|||+.|||+|++|=. .=...-+..+.. +|+...+- -+.++-.+.--++-
T Consensus 596 ~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia------~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 596 RGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA------KNRQEYEDIAVKLG 666 (723)
T ss_dssp HGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC------SSHHHHHHHHHHHH
T ss_pred HhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc------CCHHHHHHHHHHHh
Confidence 5555665 654 78999999999999999999821 122223344444 57765553 36666666666777
Q ss_pred cCHHHHHHHH-HHHHHHHhHhhcCCCc-HHHHHHHHHHHHhh
Q 044266 417 EDENFKARAL-DLKETSLNSVREGGQS-DKTFKNFVQWIKAE 456 (462)
Q Consensus 417 ~~~~~~~~a~-~l~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 456 (462)
+|++.++..+ +|.+...++.=-+... .+.+++..+.|.+.
T Consensus 667 ~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 667 TDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 7876554443 3334433320001111 56788888777664
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.81 E-value=0.00015 Score=71.80 Aligned_cols=145 Identities=11% Similarity=0.103 Sum_probs=93.3
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEE--EcCCCCCcccccCchhHH-HHhcCCceeecccCccc---ccCC
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWV--VRPDITNDAIDAYPEGFQ-DRVATRRQMVGWAPQQK---VLTH 344 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~pq~~---ll~~ 344 (462)
.++|.+|++..+..++.++...+.+++.+..++|. .+.. .+....+-..+. ..+.+++.+.+.+|+.+ .+..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~--~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS--NGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC--CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC--chhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 58999999988888888888888887777677764 3321 001111111111 12346788889988654 4567
Q ss_pred CCcccce---eccCchhhhhhhhcCCceecccccc-chhhhHHhHhhhheeeEE-eecCCCCccCHHHHHHHHHHHhcCH
Q 044266 345 PSIACFL---SHCGWNSTMEGVSNGVPFLCWPYFA-DQFLNESYICDIWKVGLR-FNKNKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 345 ~~~~~~I---~HgG~~sv~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~g~g~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
+|+ ++ ..+|..|++|||++|||+|+++-.. -...-+..+.. .|+... +. -+.++..+..-++.+|+
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVRLAENH 589 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHHHHHCH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHHHhCCH
Confidence 776 44 3478899999999999999986321 11112223344 466542 32 37888888888999999
Q ss_pred HHHHHHH
Q 044266 420 NFKARAL 426 (462)
Q Consensus 420 ~~~~~a~ 426 (462)
+.+++.+
T Consensus 590 ~~l~~LR 596 (631)
T 3q3e_A 590 QERLELR 596 (631)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7655544
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.79 E-value=0.00047 Score=64.60 Aligned_cols=104 Identities=14% Similarity=0.079 Sum_probs=75.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhcCCCCCCCCeE-EEEcCCCCCCCCCCCCHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNHKRVVNALGQNNYIGDQIK-LVSIPDGMEPEGDRNDLG 80 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~~ 80 (462)
..|||++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+.++.. +.+. ++.++.. ...
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~~~ 71 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------GRH 71 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------SHH
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------ccc
Confidence 5699999999999999999999999986 8999999999988877654 4564 5555421 111
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCc-eEEEeCCCcchHHHHHHHcCCceEE
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKI-TCVVADGSMGWVMEVAEKMKLRRAA 134 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-Dlvi~D~~~~~~~~~A~~lgiP~v~ 134 (462)
..+ ..+.++++.++. .++ |++|.=....-...++...|+|..+
T Consensus 72 ~~~--------~~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 72 NSI--------SGLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHH--------HHHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ccH--------HHHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 111 123345566666 799 9999765555566778888998755
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.77 E-value=0.00028 Score=60.16 Aligned_cols=83 Identities=8% Similarity=0.004 Sum_probs=62.2
Q ss_pred Ccee-ecccCcc---cccCCCCcccceecc----CchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCC
Q 044266 329 RRQM-VGWAPQQ---KVLTHPSIACFLSHC----GWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKN 400 (462)
Q Consensus 329 ~v~~-~~~~pq~---~ll~~~~~~~~I~Hg----G~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~ 400 (462)
++.+ .+++++. .++..+++ +|.-. ...+++||+++|+|+|+... ..+...+ .. +.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEec----
Confidence 8999 9999953 68888887 76432 24689999999999998754 3444444 42 6777774
Q ss_pred CccCHHHHHHHHHHHhc-CHHHHHH
Q 044266 401 GIITREEIMKKVDQVLE-DENFKAR 424 (462)
Q Consensus 401 ~~~~~~~l~~~i~~ll~-~~~~~~~ 424 (462)
.-+.+++.++|.++++ |++.+++
T Consensus 164 -~~~~~~l~~~i~~l~~~~~~~~~~ 187 (200)
T 2bfw_A 164 -AGDPGELANAILKALELSRSDLSK 187 (200)
T ss_dssp -TTCHHHHHHHHHHHHHCCHHHHHH
T ss_pred -CCCHHHHHHHHHHHHhcCHHHHHH
Confidence 2589999999999999 9865443
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.56 E-value=0.0052 Score=57.34 Aligned_cols=103 Identities=7% Similarity=0.013 Sum_probs=70.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhcCCCCCCCCe-EEEEcCCCCCCCCCCCCHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNHKRVVNALGQNNYIGDQI-KLVSIPDGMEPEGDRNDLGM 81 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~~~ 81 (462)
+|||++.....|++.-...+.+.|+++ |.+|++++.+.+.+.++.. +.+ +++.++.. .. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~~--~~---- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--HG--AL---- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--cc--cc----
Confidence 489999988889999999999999986 9999999998887766544 355 45544311 00 00
Q ss_pred HHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEE
Q 044266 82 LTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAA 134 (462)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~ 134 (462)
....+.++.+.++. .+||++|.-....-...++...|+|...
T Consensus 65 --------~~~~~~~l~~~l~~---~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 --------EIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred --------chHHHHHHHHHHHh---cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 11223456666766 8999999433334556677888999743
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.26 E-value=0.00024 Score=66.01 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=77.4
Q ss_pred CceeecccCccc---ccCCCCcccceeccCc---------hhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEee
Q 044266 329 RRQMVGWAPQQK---VLTHPSIACFLSHCGW---------NSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFN 396 (462)
Q Consensus 329 ~v~~~~~~pq~~---ll~~~~~~~~I~HgG~---------~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~ 396 (462)
||.+.+|+|+.+ +|+.++.+++.+-+.. +-+.|+|++|+|+|+.+ ...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 899999999875 4545556555533333 34789999999999754 55677888885 9999983
Q ss_pred cCCCCccCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHH
Q 044266 397 KNKNGIITREEIMKKVDQVLEDE--NFKARALDLKETSLNSVREGGQSDKTFKNFVQW 452 (462)
Q Consensus 397 ~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 452 (462)
+.+++.++|..+..+. ++++|+++.+++++. +.-..+.+.+.+..
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 4788999998876443 578888888888875 44445555555443
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.18 E-value=0.018 Score=53.05 Aligned_cols=108 Identities=9% Similarity=0.058 Sum_probs=67.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhcCCCCCCCCe-EEEEcCCC-CCCCCCCCCHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNHKRVVNALGQNNYIGDQI-KLVSIPDG-MEPEGDRNDLG 80 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i-~~~~i~~~-~~~~~~~~~~~ 80 (462)
+|||++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+.++.. +.+ +++.++.. .... ...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~~~~~~--~~~-- 68 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH--------AAVERVIPVAIRRWRKA--WFS-- 68 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS--------TTEEEEEEECHHHHHTT--TTS--
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC--------CCCCEEEEccHHHhhhc--cch--
Confidence 489999999999999999999999986 8999999999988877654 355 34443310 0000 000
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHH-HHHHHcCCceEE
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVM-EVAEKMKLRRAA 134 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~-~~A~~lgiP~v~ 134 (462)
......+.++++.++. .++|++|.-....-.. .++...|.+.+.
T Consensus 69 -------~~~~~~~~~~~~~lr~---~~~D~vidl~~~~~s~~~~~~l~~~~~ig 113 (326)
T 2gt1_A 69 -------APIKAERKAFREALQA---KNYDAVIDAQGLVKSAALVTRLAHGVKHG 113 (326)
T ss_dssp -------HHHHHHHHHHHHHHHH---SBCSEEEECSCCHHHHHHTGGGSBSCEEE
T ss_pred -------HHHHHHHHHHHHHHhc---cCCCEEEECCccHHHHHHHHHHcCCcEEc
Confidence 0011223455566666 8999999432222233 445555633343
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.44 E-value=0.0022 Score=61.48 Aligned_cols=85 Identities=13% Similarity=0.062 Sum_probs=58.4
Q ss_pred cCCceeecccCcc---cccCCCCcccceecc---Cc-hhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCC
Q 044266 327 ATRRQMVGWAPQQ---KVLTHPSIACFLSHC---GW-NSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNK 399 (462)
Q Consensus 327 ~~~v~~~~~~pq~---~ll~~~~~~~~I~Hg---G~-~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~ 399 (462)
.++|.+.+++|+. .+++.+++ ||.-. |. .+++||+++|+|+|+ -..+ ....+++. ..|..++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~--- 362 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLE--- 362 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEES---
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeC---
Confidence 3578899999875 57888888 66422 33 467999999999997 2221 12334442 4677774
Q ss_pred CCccCHHHHHHHHHHHhcCHHHHHH
Q 044266 400 NGIITREEIMKKVDQVLEDENFKAR 424 (462)
Q Consensus 400 ~~~~~~~~l~~~i~~ll~~~~~~~~ 424 (462)
.-++++++++|.++++|++.+++
T Consensus 363 --~~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 363 --QLNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp --SCSHHHHHHHHHHHHHHTC----
T ss_pred --CCCHHHHHHHHHHHHcCHHHHHH
Confidence 35899999999999998876655
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.20 E-value=0.16 Score=50.23 Aligned_cols=134 Identities=7% Similarity=0.109 Sum_probs=75.4
Q ss_pred EEEEeccCccccCHHHHHHHHHHH---HhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcc---cccCCC
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGL---ELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQ---KVLTHP 345 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~---~ll~~~ 345 (462)
.+++..|... +.+.+..+++|+ .+.+.++++...+.. .....-.......+.++.+....++. .+++.+
T Consensus 328 p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 328 PLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp CEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred cEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 4556678764 233444555555 334556655543220 00001111223356788888777764 477777
Q ss_pred Ccccceecc---Cc-hhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCC-----CCccCHHHHHHHHHHHh
Q 044266 346 SIACFLSHC---GW-NSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNK-----NGIITREEIMKKVDQVL 416 (462)
Q Consensus 346 ~~~~~I~Hg---G~-~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~-----~~~~~~~~l~~~i~~ll 416 (462)
++ ||.-. |. .+++||+++|+|+|+-.. ......|.+. .-|....... -...+++.|.++|++++
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 77 77532 33 488999999999998754 3334444442 3444332110 02246789999999877
Q ss_pred c
Q 044266 417 E 417 (462)
Q Consensus 417 ~ 417 (462)
.
T Consensus 476 ~ 476 (536)
T 3vue_A 476 K 476 (536)
T ss_dssp H
T ss_pred H
Confidence 4
No 58
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=93.66 E-value=0.58 Score=39.06 Aligned_cols=98 Identities=12% Similarity=0.095 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc------hHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN------HKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRN 77 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~------~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 77 (462)
+..|++++..+.|-....+.+|-+.+.+|+.|.|+..-.. ...+... +++++....++... ..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g~gf~~~--~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMATGFTWE--TQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECCTTCCCC--GG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEcccccccC--CC
Confidence 4578899999999999999999999999999999964332 2233333 58888877765532 11
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG 119 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~ 119 (462)
...+ + .......+....+.+.. .++|+||.|-...
T Consensus 97 ~~~~--~--~~~a~~~l~~a~~~l~~---~~yDlvILDEi~~ 131 (196)
T 1g5t_A 97 NREA--D--TAACMAVWQHGKRMLAD---PLLDMVVLDELTY 131 (196)
T ss_dssp GHHH--H--HHHHHHHHHHHHHHTTC---TTCSEEEEETHHH
T ss_pred CcHH--H--HHHHHHHHHHHHHHHhc---CCCCEEEEeCCCc
Confidence 1111 1 11223445555555555 8999999996543
No 59
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=92.61 E-value=1.1 Score=40.65 Aligned_cols=99 Identities=10% Similarity=0.046 Sum_probs=56.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch--------------HHHHHhhcCCCCCCCCeEEEEc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH--------------KRVVNALGQNNYIGDQIKLVSI 66 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--------------~~v~~~~~~~~~~~~~i~~~~i 66 (462)
|++++||+|+..+. ......+.|.++||+|..+.+...+ +...+. |+.+..
T Consensus 4 m~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~---------gIpv~~- 68 (318)
T 3q0i_A 4 MSQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEH---------NVPVYQ- 68 (318)
T ss_dssp ---CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHT---------TCCEEC-
T ss_pred cccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHc---------CCCEEc-
Confidence 67789999987653 2345567888899999887775332 223333 666543
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 67 PDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
+..+ .+ + ++++.++. .+||++|+-.+.- ....+-+.....++-++++.
T Consensus 69 ~~~~------~~-------------~---~~~~~l~~---~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSl 117 (318)
T 3q0i_A 69 PENF------KS-------------D---ESKQQLAA---LNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSI 117 (318)
T ss_dssp CSCS------CS-------------H---HHHHHHHT---TCCSEEEESSCCSCCCHHHHTSSTTCEEEEESSS
T ss_pred cCcC------CC-------------H---HHHHHHHh---cCCCEEEEeCccccCCHHHHhhCcCCEEEeCCcc
Confidence 2111 01 1 23444444 8999999875533 44455555555567766654
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=91.42 E-value=0.91 Score=44.01 Aligned_cols=109 Identities=8% Similarity=-0.003 Sum_probs=71.9
Q ss_pred CceeecccCcc---cccCCCCccccee---ccCchh-hhhhhhcC---CceeccccccchhhhHHhHhhhheeeEEeecC
Q 044266 329 RRQMVGWAPQQ---KVLTHPSIACFLS---HCGWNS-TMEGVSNG---VPFLCWPYFADQFLNESYICDIWKVGLRFNKN 398 (462)
Q Consensus 329 ~v~~~~~~pq~---~ll~~~~~~~~I~---HgG~~s-v~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~ 398 (462)
.|++.+.+|+. +++..+++ |+. .=|+|. .+|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 57777888864 57778887 553 458885 58999986 5555443222 222221 14677743
Q ss_pred CCCccCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHHhh
Q 044266 399 KNGIITREEIMKKVDQVLEDE--NFKARALDLKETSLNSVREGGQSDKTFKNFVQWIKAE 456 (462)
Q Consensus 399 ~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 456 (462)
.+.++++++|.++|+++ +-+++.+++.+...+ -+...-.++|++.+...
T Consensus 423 ----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 ----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 69999999999999865 455556666666554 35566677888877654
No 61
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=89.54 E-value=0.58 Score=39.56 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=41.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 50 (462)
|.++.||++.-.|+.|-++ ...|.+.|.++|++|.++.++.-...+...
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 6677899988888888777 889999999999999999998777777654
No 62
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.08 E-value=1.7 Score=37.72 Aligned_cols=113 Identities=14% Similarity=0.079 Sum_probs=63.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTK 84 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 84 (462)
||||+.---+. |---+..|++.|.+.| +|+++.+...+...-.. ......+++..+..+.. -.....+.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s----it~~~pl~~~~~~~~~~-~~v~GTPaDCV~ 74 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHS----LTFTEPLKMRKIDTDFY-TVIDGTPADCVH 74 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS----CCCSSCEEEEEEETTEE-EETTCCHHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccc----eecCCCeEEEEecCCCe-EEECCCHHHHHH
Confidence 58877553333 3444788899999888 99999998876544322 11122466655543311 001122332222
Q ss_pred HHHHhccHHHHHHHHHHhhccCCCceEEEeCC----------Ccc---hHHHHHHHcCCceEEEcc
Q 044266 85 TMVRVMPEKLEELIENINRLENEKITCVVADG----------SMG---WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~----------~~~---~~~~~A~~lgiP~v~~~~ 137 (462)
.-+. .++. . .+||+||+-. ++. .+..-|..+|||.+.++.
T Consensus 75 lal~-------~l~~---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 75 LGYR-------VILE---E---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHH-------TTTT---T---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHH-------HhcC---C---CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 2211 1111 1 6899999842 222 234557778999999875
No 63
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=88.90 E-value=1.2 Score=43.32 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=66.9
Q ss_pred ce-eecccCcc---cccCCCCccccee---ccCch-hhhhhhhcCC-----ceeccccccchhhhHHhHhhhheeeEEee
Q 044266 330 RQ-MVGWAPQQ---KVLTHPSIACFLS---HCGWN-STMEGVSNGV-----PFLCWPYFADQFLNESYICDIWKVGLRFN 396 (462)
Q Consensus 330 v~-~~~~~pq~---~ll~~~~~~~~I~---HgG~~-sv~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~g~g~~~~ 396 (462)
+. +.+++++. +++..+|+ ||. .=|+| +++||+++|+ |+|+--..+ .+..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 44 45888875 47878888 664 34665 8899999998 666553322 11112 2356663
Q ss_pred cCCCCccCHHHHHHHHHHHhcCH-H-HHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHHhh
Q 044266 397 KNKNGIITREEIMKKVDQVLEDE-N-FKARALDLKETSLNSVREGGQSDKTFKNFVQWIKAE 456 (462)
Q Consensus 397 ~~~~~~~~~~~l~~~i~~ll~~~-~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 456 (462)
..+.++++++|.++|+++ + -+++.+.+.+..++ -+...-.+++++.+.+.
T Consensus 403 -----p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 -----PYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp -----TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred -----CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 368999999999999853 3 33444444444443 24556667777766543
No 64
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=88.27 E-value=3.4 Score=37.73 Aligned_cols=102 Identities=10% Similarity=-0.006 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC--------cchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD--------YNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEG 74 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~--------~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~ 74 (462)
.++||+|+. --+-...+.+.|.+.||+|..+.+. ..++...+. |+.+..... +...
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~---------gIpv~~~~~-~~~~- 84 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD---------GVPVFKYSR-WRAK- 84 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH---------TCCEEECSC-CEET-
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc---------CCCEEecCc-cccc-
Confidence 358999982 1233345678898999999877652 223344444 777766432 1000
Q ss_pred CCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 75 DRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
....+ ++++.++. .+||++|+-.+.- ....+-+.....++-++++.
T Consensus 85 -------------~~~~~---~~~~~l~~---~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 -------------GQALP---DVVAKYQA---LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp -------------TEECH---HHHHHHHT---TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred -------------ccccH---HHHHHHHh---cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 01112 33344444 8999999876533 45555566666677776655
No 65
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=88.16 E-value=2.5 Score=42.48 Aligned_cols=40 Identities=10% Similarity=-0.030 Sum_probs=29.5
Q ss_pred cccCcc---------cccCCCCcccceecc---C-chhhhhhhhcCCceeccccc
Q 044266 334 GWAPQQ---------KVLTHPSIACFLSHC---G-WNSTMEGVSNGVPFLCWPYF 375 (462)
Q Consensus 334 ~~~pq~---------~ll~~~~~~~~I~Hg---G-~~sv~eal~~GvP~l~~P~~ 375 (462)
.|++.. .+++.+++ ||.-. | ..+++||+++|+|+|+.-..
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 888764 36777777 76543 3 44899999999999987543
No 66
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=87.62 E-value=6.7 Score=33.24 Aligned_cols=103 Identities=12% Similarity=0.132 Sum_probs=60.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCC--EEEEEeCCcc----hHHHHHhhcCCCCCCCCeEEEEcCCC-CCCCCCCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGV--KVTFLNTDYN----HKRVVNALGQNNYIGDQIKLVSIPDG-MEPEGDRN 77 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~----~~~v~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~~ 77 (462)
+||+|+.+++.+ -+.++.+.|.+.+| +|..+.+... .+..++. |+.+..++.. +.
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~~------ 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH---------NVECKVIQRKEFP------ 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH---------TCCEEECCGGGSS------
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc---------CCCEEEeCccccc------
Confidence 489988766653 35667778887787 7766655432 2344455 7887765431 11
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
+ .+...+ ++++.++. .++|++|+-.+.- ....+-+.+...++-++++.
T Consensus 64 ~--------r~~~~~---~~~~~l~~---~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 64 S--------KKEFEE---RMALELKK---KGVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp S--------HHHHHH---HHHHHHHH---TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred c--------hhhhhH---HHHHHHHh---cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 0 011112 23444444 8999999876533 55566666666777766543
No 67
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=87.00 E-value=4.9 Score=33.48 Aligned_cols=44 Identities=23% Similarity=0.259 Sum_probs=36.1
Q ss_pred cHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccchh
Q 044266 91 PEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAAA 140 (462)
Q Consensus 91 ~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~~ 140 (462)
...+++.++.+++ .+.|+||.| ..+..+|+++|+|.+.+.+...
T Consensus 128 ~~e~~~~i~~l~~---~G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 128 EDEITTLISKVKT---ENIKIVVSG---KTVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GGGHHHHHHHHHH---TTCCEEEEC---HHHHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHHH---CCCeEEECC---HHHHHHHHHcCCcEEEEecCHH
Confidence 4567788888888 899999998 4568889999999999877554
No 68
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=86.93 E-value=0.43 Score=45.46 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCCc-----cChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQ-----GHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~-----GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+++||++++.... |=......+|++|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 4689997774422 333568899999999999999999864
No 69
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=86.90 E-value=7.9 Score=33.13 Aligned_cols=105 Identities=12% Similarity=0.058 Sum_probs=62.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcc----hHHHHHhhcCCCCCCCCeEEEEcCCC-CCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYN----HKRVVNALGQNNYIGDQIKLVSIPDG-MEPEGD 75 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~i~~~~i~~~-~~~~~~ 75 (462)
+++||+|+.+++.+ -+.++.+.|.+. +++|..+.+... .+..++. |+.+..++.. +.
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~---------gIp~~~~~~~~~~---- 84 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA---------GVDALHMDPAAYP---- 84 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT---------TCEEEECCGGGSS----
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc---------CCCEEEECccccc----
Confidence 35699998766653 356667777765 688876665532 2334444 8888765421 11
Q ss_pred CCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 76 RNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
+- +...+ ++++.++. .+||++|+-.+.- ....+-+.+...++-+.++.
T Consensus 85 --~r--------~~~~~---~~~~~l~~---~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 85 --SR--------TAFDA---ALAERLQA---YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp --SH--------HHHHH---HHHHHHHH---TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred --ch--------hhccH---HHHHHHHh---cCCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 00 11112 33444444 8999999876533 55566677777777766543
No 70
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=85.39 E-value=1.8 Score=37.57 Aligned_cols=37 Identities=22% Similarity=0.202 Sum_probs=29.4
Q ss_pred CCCEEEEEcCC--CccChHHHHHHHHHHHhCCCEEEEEe
Q 044266 3 RRPHVLAFPYP--AQGHVIPLLEISQCLVKHGVKVTFLN 39 (462)
Q Consensus 3 ~~~~Il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 39 (462)
++++.+|++.. .-|=..-.+.|++.|.++|++|.++=
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 35566666644 44888899999999999999999984
No 71
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=84.66 E-value=9.7 Score=32.13 Aligned_cols=105 Identities=10% Similarity=0.129 Sum_probs=61.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcc----hHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYN----HKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRN 77 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 77 (462)
++||.++-.++.+. +.++.+.|.+. +|+|..+.+... .+..++. |+.+..++..- ..
T Consensus 3 m~ki~vl~sG~g~~---~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~---------gIp~~~~~~~~-----~~ 65 (212)
T 3av3_A 3 MKRLAVFASGSGTN---FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE---------NVPAFVFSPKD-----YP 65 (212)
T ss_dssp CEEEEEECCSSCHH---HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGG-----SS
T ss_pred CcEEEEEEECCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc---------CCCEEEeCccc-----cc
Confidence 45887776666443 55666777776 789987776532 2334444 78877654210 00
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
+. +.... ++++.++. .+||++|+-.+.- ....+-+.+...++-++++.
T Consensus 66 ~~--------~~~~~---~~~~~l~~---~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 66 SK--------AAFES---EILRELKG---RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp SH--------HHHHH---HHHHHHHH---TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred ch--------hhhHH---HHHHHHHh---cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 10 11112 33444444 8999999876533 55566677777777766543
No 72
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.58 E-value=3.5 Score=35.92 Aligned_cols=112 Identities=15% Similarity=0.135 Sum_probs=61.0
Q ss_pred CEEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHH
Q 044266 5 PHVLAFPYPAQGHVIP-LLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLT 83 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 83 (462)
.|||+.- .-|--.| +..|++.|.+.| +|+++.+...+...-.. ......+++..+...... .....+....
T Consensus 2 p~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~s----iT~~~pl~~~~~~~~~~~-~v~GTPaDCV 73 (251)
T 2wqk_A 2 PTFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLSGVGHS----LTFTEPLKMRKIDTDFYT-VIDGTPADCV 73 (251)
T ss_dssp CEEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS----CCCSSCEEEEEEETTEEE-ETTCCHHHHH
T ss_pred CEEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccC----cCCCCCceeEEeecccee-ecCCChHHHH
Confidence 4777754 3333444 677899998888 59999988776543221 111124555554321100 0112232222
Q ss_pred HHHHHhccHHHHHHHHHHhhccCCCceEEEe----------CCCcc---hHHHHHHHcCCceEEEcc
Q 044266 84 KTMVRVMPEKLEELIENINRLENEKITCVVA----------DGSMG---WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~----------D~~~~---~~~~~A~~lgiP~v~~~~ 137 (462)
..-+ ..+ +.. .+||+||+ |.++. .++.-|..+|||.+.++.
T Consensus 74 ~lal-------~~~---l~~---~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 74 HLGY-------RVI---LEE---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHH-------HTT---TTT---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhh-------hhh---cCC---CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 2211 111 222 78999998 32333 345557788999999874
No 73
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=84.39 E-value=0.95 Score=44.67 Aligned_cols=40 Identities=15% Similarity=0.182 Sum_probs=29.5
Q ss_pred CCCEEEEEcCC------CccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYP------AQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++|||||+++- +.|=-.-.-+|+++|+++||+|+++++..
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 47899999732 12222346689999999999999999643
No 74
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=84.03 E-value=5.4 Score=36.06 Aligned_cols=96 Identities=11% Similarity=0.090 Sum_probs=56.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch--------------HHHHHhhcCCCCCCCCeEEEEcCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH--------------KRVVNALGQNNYIGDQIKLVSIPDG 69 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--------------~~v~~~~~~~~~~~~~i~~~~i~~~ 69 (462)
++||+|+..+..+ +...++|.++||+|..+.+.+.+ +...+. |+.+.. ++.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~---------gIpv~~-~~~ 66 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQN---------EIPIIQ-PFS 66 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHT---------TCCEEC-CSC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHc---------CCCEEC-ccc
Confidence 6799998877554 34457888899999888774432 222222 565542 111
Q ss_pred CCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 70 MEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
+ .+ + ++++.++. .+||++|+-.+.. ....+-+.....++-++++.
T Consensus 67 ~------~~-------------~---~~~~~l~~---~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSl 112 (314)
T 3tqq_A 67 L------RD-------------E---VEQEKLIA---MNADVMVVVAYGLILPKKALNAFRLGCVNVHASL 112 (314)
T ss_dssp S------SS-------------H---HHHHHHHT---TCCSEEEEESCCSCCCHHHHTSSTTCEEEEESSC
T ss_pred C------CC-------------H---HHHHHHHh---cCCCEEEEcCcccccCHHHHhhCcCCEEEecCcc
Confidence 1 01 1 23344444 8999999875533 44455555555577776655
No 75
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=83.16 E-value=5.4 Score=37.49 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|+++.||+++..+.. .+.+++++.+.|++|.++..+.
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 666789999876653 3668999999999999997643
No 76
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=83.08 E-value=8 Score=34.94 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc--------------hHHHHHhhcCCCCCCCCeEEEEcCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN--------------HKRVVNALGQNNYIGDQIKLVSIPD 68 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~--------------~~~v~~~~~~~~~~~~~i~~~~i~~ 68 (462)
+++||+|+..+.. .....+.|.+.||+|..+.+... ++...+. |+.+.. ++
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~---------gIpv~~-~~ 66 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK---------GLPVFQ-PV 66 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT---------TCCEEC-CS
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc---------CCcEEe-cC
Confidence 4689999876542 24455777778999987776532 2223333 666542 11
Q ss_pred CCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCc-chHHHHHHHcCCceEEEccch
Q 044266 69 GMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSM-GWVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 139 (462)
.+. .+.+.+.++. .+||++|+-.+. .....+-+.....++-++++.
T Consensus 67 ~~~-------------------~~~~~~~l~~------~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 67 SLR-------------------PQENQQLVAE------LQADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp CSC-------------------SHHHHHHHHH------TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred CCC-------------------CHHHHHHHHh------cCCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 110 1223333444 899999987553 345555566666777777655
No 77
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=82.23 E-value=2.9 Score=32.61 Aligned_cols=43 Identities=7% Similarity=0.060 Sum_probs=36.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKR 46 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 46 (462)
+.||++.+.++-.|-....-++..|..+|++|..+......+.
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 5689999989999999999999999999999998887554433
No 78
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=81.87 E-value=7.8 Score=31.58 Aligned_cols=76 Identities=11% Similarity=0.121 Sum_probs=44.6
Q ss_pred eeecccCcc-c-ccCCCCcccceeccCchhhhh---hhhcCCceeccccccchhhhHHhHhhhhee-eEEeecCCCCccC
Q 044266 331 QMVGWAPQQ-K-VLTHPSIACFLSHCGWNSTME---GVSNGVPFLCWPYFADQFLNESYICDIWKV-GLRFNKNKNGIIT 404 (462)
Q Consensus 331 ~~~~~~pq~-~-ll~~~~~~~~I~HgG~~sv~e---al~~GvP~l~~P~~~DQ~~na~~v~~~~g~-g~~~~~~~~~~~~ 404 (462)
.+++..+++ . +...++. .++--||.||+-| ++.+++|++++|.+. .....+.+. .. .+.+ .-+
T Consensus 92 i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~------~~~ 160 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV------AAD 160 (176)
T ss_dssp EECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE------ESS
T ss_pred EEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE------cCC
Confidence 345667765 3 3344443 4666788998655 567999999999843 111122221 11 1222 147
Q ss_pred HHHHHHHHHHHhc
Q 044266 405 REEIMKKVDQVLE 417 (462)
Q Consensus 405 ~~~l~~~i~~ll~ 417 (462)
++++.+.+.+.+.
T Consensus 161 ~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 161 VAGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877653
No 79
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=81.52 E-value=7 Score=33.05 Aligned_cols=102 Identities=9% Similarity=0.094 Sum_probs=60.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcc----hHHHHHhhcCCCCCCCCeEEEEcCCC-CCCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYN----HKRVVNALGQNNYIGDQIKLVSIPDG-MEPE 73 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~i~~~~i~~~-~~~~ 73 (462)
|.++.||+++.++..+-+. +|.+.+.+. +++|..+.+... .+..++. |+.+..++.. +.
T Consensus 5 ~~~~~ri~vl~SG~gsnl~---all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~---------gIp~~~~~~~~~~-- 70 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSNLE---ALAKAFSTEESSVVISCVISNNAEARGLLIAQSY---------GIPTFVVKRKPLD-- 70 (215)
T ss_dssp --CCEEEEEEESSCCHHHH---HHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCBTTBC--
T ss_pred CCCCCEEEEEEECCcHHHH---HHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCcccCC--
Confidence 5567799887767655544 444455433 378887777432 2234444 8888776531 10
Q ss_pred CCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 74 GDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
. .++++.+++ .+||++|+-.+.- ....+-+.+.-.++-++++.
T Consensus 71 -----------------~---~~~~~~L~~---~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSL 114 (215)
T 3kcq_A 71 -----------------I---EHISTVLRE---HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSL 114 (215)
T ss_dssp -----------------H---HHHHHHHHH---TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred -----------------h---HHHHHHHHH---hCCCEEEEeCCceEeCHHHHhhccCCeEEECccc
Confidence 0 334444444 8999999886543 55566677776777766543
No 80
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=81.01 E-value=15 Score=32.35 Aligned_cols=39 Identities=13% Similarity=0.248 Sum_probs=31.3
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPY--PAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++|+++++. |+-|=-.-...||..|++.|.+|.++-.+.
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 456665554 567888899999999999999999987664
No 81
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=80.91 E-value=6.2 Score=34.16 Aligned_cols=111 Identities=9% Similarity=0.018 Sum_probs=60.4
Q ss_pred EEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCC-CCC-CCCCHHHH
Q 044266 6 HVLAFPYPAQGHVIP-LLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGME-PEG-DRNDLGML 82 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~-~~~-~~~~~~~~ 82 (462)
|||+.-- -|=..| +..|++.|.+.| +|+++.+...+..+.... .....+++..+..+-. ... ....+...
T Consensus 2 ~ILlTND--DGi~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~v~GTPaDC 74 (247)
T 1j9j_A 2 RILVTND--DGIQSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI----TIHVPLWMKKVFISERVVAYSTTGTPADC 74 (247)
T ss_dssp EEEEECS--SCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCCEEECCCSSSEEEEEESSCHHHH
T ss_pred eEEEEcC--CCCCcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCCceEEECCcHHHH
Confidence 6766442 233334 778899998887 999999988765443321 1112355555543200 000 11222222
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCC----------Ccc---hHHHHHHHcCCceEEEcc
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADG----------SMG---WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~----------~~~---~~~~~A~~lgiP~v~~~~ 137 (462)
...-+ ..+-. .+||+||+-. ++. .+..-|..+|||.+.++.
T Consensus 75 V~lal-----------~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 75 VKLAY-----------NVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHH-----------HTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHH-----------Hhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 22221 11212 6899999742 222 344556778999999865
No 82
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=80.14 E-value=9.9 Score=34.37 Aligned_cols=97 Identities=13% Similarity=0.068 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch--------------HHHHHhhcCCCCCCCCeEEEEcCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH--------------KRVVNALGQNNYIGDQIKLVSIPD 68 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--------------~~v~~~~~~~~~~~~~i~~~~i~~ 68 (462)
+++||+|+..+..+ ....+.|.++||+|..+.+...+ +...+. |+.+.. ++
T Consensus 3 ~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~---------gIpv~~-~~ 67 (317)
T 3rfo_A 3 AMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKH---------GIPVLQ-PL 67 (317)
T ss_dssp TTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHT---------TCCEEC-CS
T ss_pred CceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHc---------CCCEEc-cc
Confidence 57899998877543 34457788889999988775432 233333 666553 11
Q ss_pred CCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 69 GMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
. ..+ +.. ++.++. .+||++|+-.+.- ....+-+.....++-++++.
T Consensus 68 ~------~~~-------------~~~---~~~l~~---~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSl 114 (317)
T 3rfo_A 68 R------IRE-------------KDE---YEKVLA---LEPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 114 (317)
T ss_dssp C------TTS-------------HHH---HHHHHH---HCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSC
T ss_pred c------CCC-------------HHH---HHHHHh---cCCCEEEEcCchhhCCHHHHhhCcCCEEEECCcc
Confidence 1 001 111 233333 7999999886533 45555566666677776655
No 83
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=79.43 E-value=7.4 Score=37.23 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=61.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcC--CCCCCCC----CCCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIP--DGMEPEG----DRND 78 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~--~~~~~~~----~~~~ 78 (462)
+|-+|++. ++-.-++.+|+.|.+.|.++. ++......+++. |+.+..+. .++|+-- .+-.
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKTLH 75 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKTLH 75 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSSCS
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccccCCCchhhCCccccCC
Confidence 34445444 566779999999999998874 777788888887 78777765 2333331 2333
Q ss_pred HHHHHHHHHHh-ccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHH
Q 044266 79 LGMLTKTMVRV-MPEKLEELIENINRLENEKITCVVADGSMGWVMEVA 125 (462)
Q Consensus 79 ~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A 125 (462)
+.-.-..+.++ .....+++ +...- ...|+|+++ ++++--.++
T Consensus 76 P~ihgGiLa~r~~~~h~~~l-~~~~i---~~iDlVvvN-LYPF~~tv~ 118 (523)
T 3zzm_A 76 PRVHAGLLADLRKSEHAAAL-EQLGI---EAFELVVVN-LYPFSQTVE 118 (523)
T ss_dssp HHHHHHHHCCTTSHHHHHHH-HHHTC---CCCSEEEEE-CCCHHHHHH
T ss_pred chhhhhhccCCCCHHHHHHH-HHCCC---CceeEEEEe-CCChHHHHh
Confidence 33323333222 22233333 33333 788999999 666544443
No 84
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=79.16 E-value=2.6 Score=34.44 Aligned_cols=43 Identities=12% Similarity=0.006 Sum_probs=34.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVV 48 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 48 (462)
.||++.-.|+.|=+. ...+.+.|.++|++|.++.++.-.+.+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 588887777766665 8899999999999999999987655543
No 85
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=79.09 E-value=13 Score=31.44 Aligned_cols=106 Identities=13% Similarity=0.098 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc----hHHHHHhhcCCCCCCCCeEEEEcCCC-CCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN----HKRVVNALGQNNYIGDQIKLVSIPDG-MEPEGDRN 77 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~~ 77 (462)
+++||+++.++..+.+..++.-.+.= .+++|..+.+... .+..++. |+.+..++.. ++.
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~--~~~eI~~Vis~~~~a~~~~~A~~~---------gIp~~~~~~~~~~~----- 67 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKG--LAIEIRAVISNRADAYGLKRAQQA---------DIPTHIIPHEEFPS----- 67 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTT--CSEEEEEEEESCTTCHHHHHHHHT---------TCCEEECCGGGSSS-----
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCccccCc-----
Confidence 46799988877776666555443221 3689988777542 2234444 8888776521 110
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
- ..... ++++.+++ .++|++|+-.+.- ....+-+.+...++-++++.
T Consensus 68 -r--------~~~d~---~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 68 -R--------TDFES---TLQKTIDH---YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp -H--------HHHHH---HHHHHHHT---TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred -h--------hHhHH---HHHHHHHh---cCCCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 0 01112 34455555 9999999876543 55566677766777766543
No 86
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=78.77 E-value=16 Score=31.66 Aligned_cols=124 Identities=11% Similarity=0.105 Sum_probs=65.4
Q ss_pred CCEEEEEcCC--CccChHHHHHHHHHHHhCCCEEEEEeC---C-----cchHHHHHhhcCCCCCCCCeEEEEcCCCCCCC
Q 044266 4 RPHVLAFPYP--AQGHVIPLLEISQCLVKHGVKVTFLNT---D-----YNHKRVVNALGQNNYIGDQIKLVSIPDGMEPE 73 (462)
Q Consensus 4 ~~~Il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~---~-----~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~ 73 (462)
+++.+|++.. .-|=..-.+.|++.|.++|++|.++=+ . .....+..... .......+.+...
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g----~~~~~~~~~~~~p---- 96 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAG----VTQLAGLARYPQP---- 96 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHC----CCEEEEEEECSSS----
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcC----CCCCCCCeeECCC----
Confidence 4566665544 448888999999999999999999852 1 11222333210 0000111111111
Q ss_pred CCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCc----------chHHHHHHHcCCceEEEccchh
Q 044266 74 GDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSM----------GWVMEVAEKMKLRRAAFWPAAA 140 (462)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~----------~~~~~~A~~lgiP~v~~~~~~~ 140 (462)
..+. ....+........+.+.+.+.+.. .++|+||+|... .....+|+.++.|++.+.....
T Consensus 97 ---~sP~-~aa~~~~~~~~~~~~i~~~~~~l~-~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~ 168 (251)
T 3fgn_A 97 ---MAPA-AAAEHAGMALPARDQIVRLIADLD-RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADL 168 (251)
T ss_dssp ---SCHH-HHHHHTTCCCCCHHHHHHHHHTTC-CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSST
T ss_pred ---CChH-HHHHHcCCCCCCHHHHHHHHHHHH-hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCC
Confidence 0110 111111110111223333333222 689999998731 3456899999999999876553
No 87
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=78.29 E-value=11 Score=31.10 Aligned_cols=81 Identities=16% Similarity=0.199 Sum_probs=51.6
Q ss_pred EEEEEc--CCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHH
Q 044266 6 HVLAFP--YPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLT 83 (462)
Q Consensus 6 ~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 83 (462)
|++.+. -|+-|=..-...||..|+++|++|.++-.........-... ...++.+...+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~----~~~~~~~~~~~~--------------- 62 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKA----GKAAFDVFTAAS--------------- 62 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTT----SCCSSEEEECCS---------------
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhc----CCCCCcEEecCc---------------
Confidence 555443 45668888999999999999999999987654332222110 112454444321
Q ss_pred HHHHHhccHHHHHHHHHHhhccCCCceEEEeCCC
Q 044266 84 KTMVRVMPEKLEELIENINRLENEKITCVVADGS 117 (462)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~ 117 (462)
..+.++++.++ .++|+||.|.-
T Consensus 63 --------~~l~~~l~~l~----~~yD~viiD~~ 84 (206)
T 4dzz_A 63 --------EKDVYGIRKDL----ADYDFAIVDGA 84 (206)
T ss_dssp --------HHHHHTHHHHT----TTSSEEEEECC
T ss_pred --------HHHHHHHHHhc----CCCCEEEEECC
Confidence 34555666654 57999999964
No 88
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=76.71 E-value=6.2 Score=34.87 Aligned_cols=111 Identities=10% Similarity=-0.016 Sum_probs=60.5
Q ss_pred EEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCC-CCCCHHHHH
Q 044266 6 HVLAFPYPAQGHVIP-LLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEG-DRNDLGMLT 83 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~-~~~~~~~~~ 83 (462)
|||+.-- -|=..| +..|++.|.+.| +|+++.+...+..+.... .....+++..++.+-.... ....+....
T Consensus 2 ~ILlTND--DGi~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si----Tl~~pl~~~~~~~~~~~~~~v~GTPaDCV 74 (280)
T 1l5x_A 2 KILVTND--DGVHSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI----TLHKPLRMYEVDLCGFRAIATSGTPSDTV 74 (280)
T ss_dssp EEEEECS--SCTTCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC----CCSSCBCEEEEECSSSEEEEESSCHHHHH
T ss_pred eEEEEcC--CCCCcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCceEEECCcHHHHH
Confidence 6766442 233334 778899999888 999999988765443221 1112355555432100000 111222222
Q ss_pred HHHHHhccHHHHHHHHHHhhccCCCceEEEeCC-----------Ccc---hHHHHHHHcCCceEEEccc
Q 044266 84 KTMVRVMPEKLEELIENINRLENEKITCVVADG-----------SMG---WVMEVAEKMKLRRAAFWPA 138 (462)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~-----------~~~---~~~~~A~~lgiP~v~~~~~ 138 (462)
.. -+..+ . .+||+||+-. ++. .+..-|..+|||.+.++..
T Consensus 75 ~l-----------al~~l-~---~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 75 YL-----------ATFGL-G---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HH-----------HHHHH-T---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HH-----------HHhcC-C---CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 21 12223 3 7999999732 222 3334467789999999763
No 89
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=76.55 E-value=9.7 Score=32.87 Aligned_cols=109 Identities=15% Similarity=0.106 Sum_probs=61.6
Q ss_pred EEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCC----CC-CCCCH
Q 044266 6 HVLAFPYPAQGHVIP-LLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEP----EG-DRNDL 79 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~----~~-~~~~~ 79 (462)
|||+.-- -|=..| +..|++.|.+.| +|+++.+...+..+... ......+++..++.+.+. .. ....+
T Consensus 2 ~ILlTND--DGi~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s----iTl~~pl~~~~~~~~~~~~~~~~~~v~GTP 74 (244)
T 2e6c_A 2 RILVTND--DGIYSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHA----ITIAHPVRAYPHPSPLHAPHFPAYRVRGTP 74 (244)
T ss_dssp EEEEECS--SCTTCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSS----CCCSSCBEEEECCCCTTSCCCCEEEEESCH
T ss_pred eEEEEcC--CCCCcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc----ccCCCCeEEEEeccCcCCCCCceEEEcCcH
Confidence 6766442 233334 778899998888 89999998776543221 112235777776542110 00 01223
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCC----------Ccc---hHHHHHHHcCCceEEEcc
Q 044266 80 GMLTKTMVRVMPEKLEELIENINRLENEKITCVVADG----------SMG---WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~----------~~~---~~~~~A~~lgiP~v~~~~ 137 (462)
......-+. + . .+||+||+-. ++. .+..-|..+|||.+.++.
T Consensus 75 aDCV~lal~------------l-~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 75 ADCVALGLH------------L-F---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHHHH------------H-S---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHc------------C-C---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 322222211 2 2 7999999742 222 344556778999999864
No 90
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=76.45 E-value=3.9 Score=32.84 Aligned_cols=44 Identities=20% Similarity=0.245 Sum_probs=37.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKR 46 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 46 (462)
++.||++.+.++-.|-....-++..|..+|++|.++......+.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~ 60 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQ 60 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 35799999999999999999999999999999999986554433
No 91
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=76.33 E-value=20 Score=32.01 Aligned_cols=39 Identities=18% Similarity=0.368 Sum_probs=31.0
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPY--PAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.++++++. ++-|=-.-...||..|++.|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 446655553 567888999999999999999999997654
No 92
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=75.88 E-value=3.8 Score=34.14 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=37.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHHh
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKH-GVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~v~~~ 50 (462)
+||++--.|+.|-+. ...|.+.|.++ |++|.++.++.-...+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 378887778877766 89999999999 9999999998877766644
No 93
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=75.88 E-value=3.3 Score=34.77 Aligned_cols=42 Identities=10% Similarity=-0.035 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeCCcch
Q 044266 2 LRRPHVLAFPYPAQGHVIP-LLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
.++.||++.-.|+ +..+- ...+.+.|.++|++|.++.++.-.
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 3567898777776 44554 789999999999999999997655
No 94
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=75.78 E-value=13 Score=29.40 Aligned_cols=98 Identities=11% Similarity=0.058 Sum_probs=65.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHH-hhcCCCCCCCCeEEEEcCCCCCCCCCCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNHKRVVN-ALGQNNYIGDQIKLVSIPDGMEPEGDRN 77 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 77 (462)
|+++.+|++.. .-.+-.-++.+|+.|.+. ||++ +.+......+++ . |+.+..+-.+...
T Consensus 8 ~p~~g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l--~AT~gTa~~L~e~~---------Gl~v~~v~k~~eG----- 69 (152)
T 1b93_A 8 LPARKHIALVA--HDHCKQMLMSWVERHQPLLEQHVL--YATGTTGNLISRAT---------GMNVNAMLSGPMG----- 69 (152)
T ss_dssp ECSSCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEE--EEETTHHHHHHHHH---------CCCCEEECCGGGT-----
T ss_pred CCCCCEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHHh---------CceeEEEEecCCC-----
Confidence 34456666643 456677899999999998 9965 466677788888 6 7776665422100
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCC--cc-h-------HHHHHHHcCCceEE
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGS--MG-W-------VMEVAEKMKLRRAA 134 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~--~~-~-------~~~~A~~lgiP~v~ 134 (462)
-.+++-++++. .+.|+||.-.- .. . -..+|-.+|||+++
T Consensus 70 ------------G~p~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 ------------GDQQVGALISE------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp ------------HHHHHHHHHHT------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred ------------CCchHHHHHHC------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 12445555555 99999997543 22 2 34678899999986
No 95
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=75.72 E-value=1.8 Score=36.05 Aligned_cols=46 Identities=7% Similarity=-0.073 Sum_probs=36.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 49 (462)
++.||++...|+.|=+. ...+.+.|.++|++|.++.++.-...+..
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 34689888878777666 68999999999999999999876555443
No 96
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=75.59 E-value=28 Score=27.53 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=29.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.+++|+..|.. +.|++.+++.|.++|.+|+++ ....
T Consensus 24 ~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 47888775543 999999999999999999999 5543
No 97
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=75.42 E-value=20 Score=30.12 Aligned_cols=101 Identities=17% Similarity=0.128 Sum_probs=61.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcc----hHHHHHhhcCCCCCCCCeEEEEcCC-CCCCCCCCCC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYN----HKRVVNALGQNNYIGDQIKLVSIPD-GMEPEGDRND 78 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~i~~~~i~~-~~~~~~~~~~ 78 (462)
||+++.++..+. +.+|.+.+.+. +|+|..+.+... .+..++. |+.+..++. .+. +
T Consensus 2 ri~vl~Sg~gsn---l~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~---------gIp~~~~~~~~~~------~ 63 (212)
T 1jkx_A 2 NIVVLISGNGSN---LQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA---------GIATHTLIASAFD------S 63 (212)
T ss_dssp EEEEEESSCCHH---HHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT---------TCEEEECCGGGCS------S
T ss_pred EEEEEEECCcHH---HHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc---------CCcEEEeCccccc------c
Confidence 788877666653 55566666654 588877766542 2334444 888877542 111 0
Q ss_pred HHHHHHHHHHhccHHH-HHHHHHHhhccCCCceEEEeCCCc-chHHHHHHHcCCceEEEccch
Q 044266 79 LGMLTKTMVRVMPEKL-EELIENINRLENEKITCVVADGSM-GWVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 79 ~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~Dlvi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 139 (462)
+..+ .++++.++. .+||++|+-.+. .....+-+.+...++-++++.
T Consensus 64 ------------r~~~~~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 64 ------------REAYDRELIHEIDM---YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp ------------HHHHHHHHHHHHGG---GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred ------------hhhccHHHHHHHHh---cCCCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 1112 234555555 899999988653 355566677777777766544
No 98
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=75.02 E-value=24 Score=32.11 Aligned_cols=41 Identities=20% Similarity=0.115 Sum_probs=33.3
Q ss_pred CCEEEEEc-CCCccChHHHHHHHHHHHhCCCEEEEEeCCcch
Q 044266 4 RPHVLAFP-YPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 4 ~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
+.+|+|+. -|+.|-..-...||..|+++|++|.++..+...
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 34666554 456699999999999999999999999998643
No 99
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=74.70 E-value=9.8 Score=32.15 Aligned_cols=106 Identities=11% Similarity=0.077 Sum_probs=59.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch---HHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH---KRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLG 80 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~---~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 80 (462)
++||+++.++..+.+..++.-.+. ..+++|..+.+.... +..++. |+.+..++.. .. .+-
T Consensus 12 ~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~~~---------gIp~~~~~~~--~~---~~r- 74 (215)
T 3da8_A 12 PARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAAEA---------SVPVFTVRLA--DH---PSR- 74 (215)
T ss_dssp SEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHHHT---------TCCEEECCGG--GS---SSH-
T ss_pred CcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHHHc---------CCCEEEeCcc--cc---cch-
Confidence 569998887776655555543221 235688877766543 234444 7887765311 00 000
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCc-chHHHHHHHcCCceEEEccch
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSM-GWVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 139 (462)
..... ++++.+++ .++|++|+-.+. .....+-+.+...++-++++.
T Consensus 75 -------~~~d~---~~~~~l~~---~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL 121 (215)
T 3da8_A 75 -------DAWDV---AITAATAA---HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPAL 121 (215)
T ss_dssp -------HHHHH---HHHHHHHT---TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSC
T ss_pred -------hhhhH---HHHHHHHh---hCCCEEEEcCchhhCCHHHHhhccCCeEEeCccc
Confidence 01122 34445555 899999986543 345555566666667665543
No 100
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=74.53 E-value=5.5 Score=37.03 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=30.4
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVLAFPY-PAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
++|++++. ++.|-..-...||..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 47776654 4558889999999999999999999998
No 101
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=74.00 E-value=36 Score=28.52 Aligned_cols=103 Identities=11% Similarity=0.071 Sum_probs=58.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcch----HHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCH
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNH----KRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDL 79 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 79 (462)
||+++.++..+.+..++ +.+.+. +|+|..+.+.... +...+. |+.+..++..-. .+-
T Consensus 2 riaVl~SG~Gs~L~aLi---~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~-----~~r 64 (209)
T 1meo_A 2 RVAVLISGTGSNLQALI---DSTREPNSSAQIDIVISNKAAVAGLDKAERA---------GIPTRVINHKLY-----KNR 64 (209)
T ss_dssp EEEEEESSSCTTHHHHH---HHHHSTTCSCEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGGS-----SSH
T ss_pred eEEEEEECCchHHHHHH---HHHhcCCCCcEEEEEEeCCCChHHHHHHHHc---------CCCEEEECcccc-----Cch
Confidence 78888777776655544 444443 7999887765532 233444 787776542100 000
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 80 GMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
..... ++++.++. .+||++|+-.+.- ....+-+.+...++-+.++.
T Consensus 65 --------~~~~~---~~~~~l~~---~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 111 (209)
T 1meo_A 65 --------VEFDS---AIDLVLEE---FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSL 111 (209)
T ss_dssp --------HHHHH---HHHHHHHH---TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred --------hhhhH---HHHHHHHh---cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCc
Confidence 01112 23344444 8999999776533 45555666766777766543
No 102
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=73.77 E-value=16 Score=32.70 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=56.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc-----------hHHHHHhhcCCCCCCCCeEEEEcCCCCCCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN-----------HKRVVNALGQNNYIGDQIKLVSIPDGMEPE 73 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-----------~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~ 73 (462)
+||+|+..+. ......+.|.++||+|..+.+... ++...+. |+.+..... .
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~---------gIpv~~~~~-~--- 62 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPDN-V--- 62 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH---------TCCEECCSC-C---
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc---------CCCEECCCc-C---
Confidence 4888876432 224456778888999988776543 2334444 676654221 0
Q ss_pred CCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCc-chHHHHHHHcCCceEEEccch
Q 044266 74 GDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSM-GWVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 139 (462)
.+ + ++++.++. .+||++|+-.+. .....+-+.....++-++++.
T Consensus 63 ---~~-------------~---~~~~~l~~---~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 107 (305)
T 2bln_A 63 ---NH-------------P---LWVERIAQ---LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (305)
T ss_dssp ---CS-------------H---HHHHHHHH---TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSC
T ss_pred ---Cc-------------H---HHHHHHHh---cCCCEEEEeccccccCHHHHhcCcCCEEEecCCc
Confidence 00 1 23334444 899999987553 355555566666677777664
No 103
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=73.36 E-value=12 Score=29.17 Aligned_cols=96 Identities=10% Similarity=0.079 Sum_probs=61.1
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHH
Q 044266 8 LAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMV 87 (462)
Q Consensus 8 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 87 (462)
+|++... .+-.-++.+|+.|.+.|+++ +++......+++. |+.+..+.+....+.
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~---------Gi~v~~v~k~~egg~------------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN---------NVPATPVAWPSQEGQ------------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT---------TCCCEEECCGGGC---------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc---------CCeEEEEEeccCCCc-------------
Confidence 4444333 46777999999999999974 4555667788776 777766653221100
Q ss_pred HhccHHHHHHHHHHhhccCCCceEEEeCCCc--------chHHHHHHHcCCceEE
Q 044266 88 RVMPEKLEELIENINRLENEKITCVVADGSM--------GWVMEVAEKMKLRRAA 134 (462)
Q Consensus 88 ~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~--------~~~~~~A~~lgiP~v~ 134 (462)
+...+.+.++++. .+.|+||.-+.. +.-...|-.+|||+++
T Consensus 82 ~~~~~~i~d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 NPSLSSIRKLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp ---CBCHHHHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred ccccccHHHHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0011334455555 999999986543 1344668889999986
No 104
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=73.17 E-value=6.9 Score=32.95 Aligned_cols=45 Identities=18% Similarity=0.077 Sum_probs=38.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVV 48 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 48 (462)
+.+|++.+.++-.|-....-++..|..+|++|.++......+.+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~ 132 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFV 132 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 468999999999999999999999999999999998866544443
No 105
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=72.65 E-value=7.1 Score=32.27 Aligned_cols=44 Identities=11% Similarity=0.062 Sum_probs=36.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 49 (462)
.||++.-.|+.|-+ =...+.+.|.++|++|.++.++.-...+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 48988888888855 578999999999999999999887777665
No 106
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=72.12 E-value=29 Score=30.69 Aligned_cols=40 Identities=15% Similarity=0.311 Sum_probs=31.2
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 4 RPHVLAFPY--PAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 4 ~~~Il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
+.|+++++. |+-|--.-...||..|++.|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 446655543 4668888899999999999999999976543
No 107
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=71.55 E-value=33 Score=29.13 Aligned_cols=107 Identities=8% Similarity=0.080 Sum_probs=64.5
Q ss_pred cChHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCC-------------CCCCC------CC
Q 044266 16 GHVIPLLEISQCLVKH-GVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPD-------------GMEPE------GD 75 (462)
Q Consensus 16 GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~-------------~~~~~------~~ 75 (462)
+.+.-.+.+|+.+.+. |.+|.+ +-..+...+++. .++.++.++- ..... ..
T Consensus 46 ~~le~av~~a~~~~~~~~~dVII-SRGgta~~Lr~~--------~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~ 116 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAII-AAGSNGAYLKSR--------LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQE 116 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEE-EEHHHHHHHHTT--------CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESS
T ss_pred CcHHHHHHHHHHHHhcCCCeEEE-eCChHHHHHHhh--------CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCch
Confidence 4456667777776554 466443 333566666654 2577777661 11110 00
Q ss_pred CCCHHHHHHHHHHh--------ccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 76 RNDLGMLTKTMVRV--------MPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 76 ~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
.......+..++.. .....++.++.++. .+.|+||.| ..+..+|+++|+|.+.+.+
T Consensus 117 ~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~---~G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 117 TIPALVAFQKTFNLRLDQRSYITEEDARGQINELKA---NGTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp CCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHH---TTCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred hhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH---CCCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 11112223333221 15567888888888 899999998 4568889999999999874
No 108
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=71.23 E-value=6.6 Score=35.60 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=36.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEE
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVS 65 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~ 65 (462)
++||+++-.|+.|- .+|..|++.||+|+++.... .+.+.+. |+....
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~---------Gl~~~~ 48 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK---------GIRIRS 48 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH---------CEEEEE
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC---------CcEEee
Confidence 46999998888774 56788999999999998866 4666666 666654
No 109
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=71.17 E-value=16 Score=34.75 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=34.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHK 45 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 45 (462)
.|+++..++.|-..-...||..|+++|+.|.++..+.+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 4567777788999999999999999999999999877644
No 110
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.74 E-value=5.7 Score=33.21 Aligned_cols=44 Identities=23% Similarity=0.030 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCCccChH-HHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 044266 3 RRPHVLAFPYPAQGHVI-PLLEISQCLVKHGVKVTFLNTDYNHKRV 47 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~~~v 47 (462)
++.||++--.|+ +..+ =.+.+.+.|.++|++|.++.++.-...+
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 456898877777 5555 7899999999999999999997655443
No 111
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=70.71 E-value=34 Score=29.33 Aligned_cols=38 Identities=13% Similarity=0.225 Sum_probs=29.9
Q ss_pred CEEEEEc--CCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFP--YPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+|++.+. -++.|=..-...||..|+++|++|.++=...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3555443 3456888999999999999999999987665
No 112
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=69.95 E-value=24 Score=31.23 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=54.8
Q ss_pred CCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceE
Q 044266 32 GVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITC 111 (462)
Q Consensus 32 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dl 111 (462)
..+..+++.+.+.-..... |++...+.. ...+. ......+.++++.+++ .+..+
T Consensus 178 ~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~~~~~-------------eps~~~l~~l~~~ik~---~~v~~ 231 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKRF---------GLKQLGISG-ISPEQ-------------EPSPRQLKEIQDFVKE---YNVKT 231 (286)
T ss_dssp SCCEEEEEESCCHHHHHHT---------TCEEEEEEC-SCC----------------CCHHHHHHHHHHHHH---TTCCE
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEeeccc-cCCCC-------------CCCHHHHHHHHHHHHH---cCCCE
Confidence 3455566777787777777 888776532 11111 2234556677777777 99999
Q ss_pred EEeCCCcc--hHHHHHHHcCCceEEEcc
Q 044266 112 VVADGSMG--WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 112 vi~D~~~~--~~~~~A~~lgiP~v~~~~ 137 (462)
|+++.... .+-.+|+..|++++.+.+
T Consensus 232 if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 232 IFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp EEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred EEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 99998766 556889999999987654
No 113
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=69.93 E-value=8.8 Score=33.54 Aligned_cols=41 Identities=20% Similarity=0.126 Sum_probs=36.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
++.+|++.+.++-.|-....-++..|..+|++|.+++....
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp 162 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVP 162 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 35689999999999999999999999999999998886543
No 114
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=69.79 E-value=6.8 Score=35.33 Aligned_cols=41 Identities=17% Similarity=0.119 Sum_probs=31.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 50 (462)
++||+++-.|+.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 46899998888884 46788999999999998865 4666655
No 115
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=68.74 E-value=31 Score=28.87 Aligned_cols=103 Identities=11% Similarity=0.088 Sum_probs=58.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcc----hHHHHHhhcCCCCCCCCeEEEEcCCC-CCCCCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYN----HKRVVNALGQNNYIGDQIKLVSIPDG-MEPEGDR 76 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~ 76 (462)
+.||+++.++..+.+.. |.+.+.+. +++|..+.+... .+..++. |+.+..++.. +.
T Consensus 7 ~~ri~vl~SG~gsnl~a---ll~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~---------gIp~~~~~~~~~~----- 69 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEA---LIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA---------GIATQVFKRKDFA----- 69 (209)
T ss_dssp CEEEEEEESSCCHHHHH---HHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCGGGSS-----
T ss_pred CccEEEEEECCcHHHHH---HHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc---------CCCEEEeCccccC-----
Confidence 56898887776655444 44455443 378887776432 2234444 8888776521 10
Q ss_pred CCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccc
Q 044266 77 NDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPA 138 (462)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~ 138 (462)
+. ....+ ++++.+++ .+||++|+-.+.- ....+-+.+.-.++-++++
T Consensus 70 -~r--------~~~d~---~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 70 -SK--------EAHED---AILAALDV---LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -SH--------HHHHH---HHHHHHHH---HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -CH--------HHHHH---HHHHHHHh---cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 00 01122 33344444 8999999886543 5556666666667766554
No 116
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=68.66 E-value=16 Score=28.19 Aligned_cols=97 Identities=8% Similarity=0.065 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHH-hhcCCCCCCCCeEEEEcCCCCCCCCCCCCH
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNHKRVVN-ALGQNNYIGDQIKLVSIPDGMEPEGDRNDL 79 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 79 (462)
++++|.+.. .-.+-.-++.+|+.|.+. ||+ ++.+......+++ . |+.+..+-.+..
T Consensus 2 ~~~~ialsv--~D~dK~~~v~~a~~~~~ll~Gf~--l~AT~gTa~~L~e~~---------Gl~v~~v~k~~~-------- 60 (134)
T 2xw6_A 2 HMRALALIA--HDAKKEEMVAFCQRHREVLARFP--LVATGTTGRRIEEAT---------GLTVEKLLSGPL-------- 60 (134)
T ss_dssp CSCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSC--EEECHHHHHHHHHHH---------CCCCEECSCGGG--------
T ss_pred CccEEEEEE--ecccHHHHHHHHHHHHHHhCCCE--EEEccHHHHHHHHhh---------CceEEEEEecCC--------
Confidence 456777753 446677899999999998 995 4577778888888 6 777666542210
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCC--cc--------hHHHHHHHcCCceEEE
Q 044266 80 GMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGS--MG--------WVMEVAEKMKLRRAAF 135 (462)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~--~~--------~~~~~A~~lgiP~v~~ 135 (462)
.-.+++-++++. .+.|+||.-.- .. .-..+|-.++||+++-
T Consensus 61 ---------eG~p~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 61 ---------GGDQQMGARVAE------GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp ---------THHHHHHHHHHT------TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred ---------CCcchHHHHHHC------CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 012445555555 99999997543 21 2457788999999973
No 117
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=68.52 E-value=3.8 Score=33.62 Aligned_cols=45 Identities=11% Similarity=0.022 Sum_probs=35.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 50 (462)
.||++.-.|+.+=+ =...+.+.|.++|++|.++.++.-...+...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 37887777776655 5689999999999999999998766555443
No 118
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=66.21 E-value=13 Score=36.28 Aligned_cols=26 Identities=15% Similarity=-0.150 Sum_probs=21.7
Q ss_pred CCceEEEeCCCcchHHHHHHHcCCceEEE
Q 044266 107 EKITCVVADGSMGWVMEVAEKMKLRRAAF 135 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~ 135 (462)
.+||++|.. .....+|+++|||++.+
T Consensus 455 ~~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 455 LKPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HCCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred cCCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 899999987 34578899999999964
No 119
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.93 E-value=61 Score=27.42 Aligned_cols=144 Identities=8% Similarity=0.040 Sum_probs=80.3
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHh-cCCceeecccCcccccCCCCc
Q 044266 269 QNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRV-ATRRQMVGWAPQQKVLTHPSI 347 (462)
Q Consensus 269 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~pq~~ll~~~~~ 347 (462)
+++++.|..|.++ ...++.|.+.|..++++.. . +.+.+.+-. .+++.....--+...|..+++
T Consensus 31 gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-~--------~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL 94 (223)
T 3dfz_A 31 GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-T--------VSAEINEWEAKGQLRVKRKKVGEEDLLNVFF 94 (223)
T ss_dssp TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-S--------CCHHHHHHHHTTSCEEECSCCCGGGSSSCSE
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-C--------CCHHHHHHHHcCCcEEEECCCCHhHhCCCCE
Confidence 3668888888544 3455666677888776543 2 112222211 234544433233455666565
Q ss_pred ccceeccCchhhhhhhh----cCCceeccccccchhhhH-----HhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcC
Q 044266 348 ACFLSHCGWNSTMEGVS----NGVPFLCWPYFADQFLNE-----SYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLED 418 (462)
Q Consensus 348 ~~~I~HgG~~sv~eal~----~GvP~l~~P~~~DQ~~na-----~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~ 418 (462)
+|.--|.-.+.+.++ .|+|+-++ |.+..+ ..+.+. ++-+.+...+....-+..|++.|...+..
T Consensus 95 --VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~ 167 (223)
T 3dfz_A 95 --IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDE 167 (223)
T ss_dssp --EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCT
T ss_pred --EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccH
Confidence 888888766655544 46665444 443332 223332 45555554333445668889999888854
Q ss_pred H--HHHHHHHHHHHHHHhH
Q 044266 419 E--NFKARALDLKETSLNS 435 (462)
Q Consensus 419 ~--~~~~~a~~l~~~~~~~ 435 (462)
. .+.+.+.++++++++.
T Consensus 168 ~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 168 SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3 5677777777777763
No 120
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=65.66 E-value=7.5 Score=32.69 Aligned_cols=45 Identities=13% Similarity=0.199 Sum_probs=37.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 50 (462)
+.||++...|+.+-+. ...|.+.|.++| +|.++.++.-...+...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 4689988888888776 899999999999 99999998776665544
No 121
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=65.64 E-value=18 Score=33.17 Aligned_cols=45 Identities=18% Similarity=0.231 Sum_probs=34.8
Q ss_pred CCEEEEEc-CCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 044266 4 RPHVLAFP-YPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 4 ~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 49 (462)
+.+|+++. -|+.|-..-...||..|+++|++|.++..+.. ..+..
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~-~~l~~ 70 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA-HSLRD 70 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT-CHHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC-CCHHH
Confidence 34565554 45669999999999999999999999999873 34433
No 122
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=65.40 E-value=4.4 Score=37.31 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
||+++||+++-.|..|. .+|..|+++||+|+++...
T Consensus 1 mm~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp ---CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 66778999998766663 4678899999999988654
No 123
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=65.38 E-value=12 Score=31.54 Aligned_cols=45 Identities=20% Similarity=0.179 Sum_probs=39.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVV 48 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~ 48 (462)
+.||++.+.++-.|-....-++..|..+|++|..+......+.+.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv 136 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVV 136 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHH
Confidence 569999999999999999999999999999999998766554443
No 124
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=64.63 E-value=55 Score=31.87 Aligned_cols=27 Identities=4% Similarity=-0.016 Sum_probs=20.7
Q ss_pred CCceEEEeCCCcchHHHHHHHc-------CCceEEEc
Q 044266 107 EKITCVVADGSMGWVMEVAEKM-------KLRRAAFW 136 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~~~~A~~l-------giP~v~~~ 136 (462)
.+||++|.... ...+|+++ |||++.+.
T Consensus 437 ~~pDLlig~s~---~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 437 DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEECS
T ss_pred cCCCEEEECcc---HHHHHHHhhcccccCCCceEEec
Confidence 89999999953 34566666 99999753
No 125
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=64.13 E-value=12 Score=33.85 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=31.8
Q ss_pred CEEEEE-cCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAF-PYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+|+|+ .-|+.|-..-...||..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 355544 45677999999999999999999999999887
No 126
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=62.81 E-value=25 Score=33.31 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=33.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCCcchH
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKH-GVKVTFLNTDYNHK 45 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~ 45 (462)
.|+++..++.|-..-...||..|+++ |+.|.++....+..
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 45677777789999999999999999 99999999886543
No 127
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=62.71 E-value=17 Score=34.36 Aligned_cols=98 Identities=15% Similarity=0.102 Sum_probs=50.0
Q ss_pred CCCC-CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCH
Q 044266 1 MLRR-PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDL 79 (462)
Q Consensus 1 ~~~~-~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 79 (462)
|.++ .||+++. ++..+ . -+.+++++.|++|+++.+.......... .--.++.++. ..+.
T Consensus 1 M~~~~k~l~Il~-~~~~~-~---~i~~aa~~lG~~vv~v~~~~~~~~~~~~--------~~d~~~~~~~-------~~d~ 60 (425)
T 3vot_A 1 MTKRNKNLAIIC-QNKHL-P---FIFEEAERLGLKVTFFYNSAEDFPGNLP--------AVERCVPLPL-------FEDE 60 (425)
T ss_dssp -CCCCCEEEEEC-CCTTC-C---HHHHHHHHTTCEEEEEEETTSCCCCSCT--------TEEEEEEECT-------TTCH
T ss_pred CCCCCcEEEEEC-CChhH-H---HHHHHHHHCCCEEEEEECCCcccccCHh--------hccEEEecCC-------CCCH
Confidence 6655 4566665 33333 2 2457777889999998765432100000 0113343331 1122
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeC--CCcchHHHHHHHcCCce
Q 044266 80 GMLTKTMVRVMPEKLEELIENINRLENEKITCVVAD--GSMGWVMEVAEKMKLRR 132 (462)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D--~~~~~~~~~A~~lgiP~ 132 (462)
...+ ..+.++.+. .++|.|++- .....+..+++.+|+|.
T Consensus 61 ~~~~--------~~~~~~~~~------~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 61 EAAM--------DVVRQTFVE------FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHH--------HHHHHHHHH------SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHH--------HHHHHhhhh------cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1111 113333344 889999853 23335667789999994
No 128
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=62.55 E-value=27 Score=28.30 Aligned_cols=95 Identities=12% Similarity=0.080 Sum_probs=64.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHH-hhcCCCCCCCCeEEEEcCCCCCCCCCCCCHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNHKRVVN-ALGQNNYIGDQIKLVSIPDGMEPEGDRNDLG 80 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 80 (462)
+.+|++.. .-.+-.-++.+|+.|.+. ||++ +.+......+.+ . |+.+..+-.+...
T Consensus 27 ~g~V~lsv--~D~dK~~lv~~ak~~~~lL~Gf~L--~AT~gTa~~L~e~~---------Gl~v~~v~k~~eG-------- 85 (178)
T 1vmd_A 27 KKRIALIA--HDRRKRDLLEWVSFNLGTLSKHEL--YATGTTGALLQEKL---------GLKVHRLKSGPLG-------- 85 (178)
T ss_dssp SCEEEEEE--CGGGHHHHHHHHHHSHHHHTTSEE--EECHHHHHHHHHHH---------CCCCEECSCGGGT--------
T ss_pred CCEEEEEE--ehhhHHHHHHHHHHHHHHhcCCEE--EEchHHHHHHHHHh---------CceeEEEeecCCC--------
Confidence 44555542 446677899999999998 9954 577778888888 6 7776665322100
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCC--cc--------hHHHHHHHcCCceEE
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKITCVVADGS--MG--------WVMEVAEKMKLRRAA 134 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~--~~--------~~~~~A~~lgiP~v~ 134 (462)
-.+++-++++. .+.|+||.-.- .. .-..+|-.+|||+++
T Consensus 86 ---------G~pqI~d~I~~------geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 86 ---------GDQQIGAMIAE------GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp ---------HHHHHHHHHHT------TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred ---------CCchHHHHHHC------CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 12445555555 99999997543 22 245778999999987
No 129
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=62.40 E-value=43 Score=32.57 Aligned_cols=26 Identities=0% Similarity=0.073 Sum_probs=21.6
Q ss_pred CCceEEEeCCCcchHHHHHHHc-------CCceEEE
Q 044266 107 EKITCVVADGSMGWVMEVAEKM-------KLRRAAF 135 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~~~~A~~l-------giP~v~~ 135 (462)
.+||++|.+. ....+|+++ |||++.+
T Consensus 433 ~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 433 RQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred cCCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 7899999985 357778888 9999875
No 130
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=62.35 E-value=2.2 Score=37.12 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=25.4
Q ss_pred CCceEEE-eCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 107 EKITCVV-ADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
..||+|| +|+..- .++.-|.++|||+|.++-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 5889877 565444 67888999999999976544
No 131
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=61.77 E-value=44 Score=26.44 Aligned_cols=138 Identities=9% Similarity=0.077 Sum_probs=76.7
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACF 350 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~ 350 (462)
|.|-|-.||.+ +....++....++..|.++-+.+.+. .-.|+.+.+. +-... ..-.++.+
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~~~----------~~~a~--~~~~~~Vi 62 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVVSM----------LKEYE--ALDRPKLY 62 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHHH----------HHHHH--TSCSCEEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHHH----------HHHhh--hcCCCcEE
Confidence 35667777644 66777888888888887765554432 2233332211 10000 00012337
Q ss_pred eeccCch----hhhhhhhcCCceecccccc---chh-hhH-HhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHH
Q 044266 351 LSHCGWN----STMEGVSNGVPFLCWPYFA---DQF-LNE-SYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENF 421 (462)
Q Consensus 351 I~HgG~~----sv~eal~~GvP~l~~P~~~---DQ~-~na-~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 421 (462)
|.=+|.. ++..++ .-+|+|.+|... +-. .++ -++-. |+.+.-- ++..++.-++..|..+ .|+++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp~--GvpVatv---~~~~nAa~lA~~Il~~-~d~~l 135 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMPS--GISPALV---LEPKNAALLAARIFSL-YDKEI 135 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCCT--TCCCEEC---CSHHHHHHHHHHHHTT-TCHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCCC--CCceEEe---cCchHHHHHHHHHHhC-CCHHH
Confidence 7776654 333333 558999999532 111 222 11111 5443221 2557777777777554 58999
Q ss_pred HHHHHHHHHHHHhH
Q 044266 422 KARALDLKETSLNS 435 (462)
Q Consensus 422 ~~~a~~l~~~~~~~ 435 (462)
+++.+..+++..+.
T Consensus 136 ~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 136 ADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988888764
No 132
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=61.71 E-value=7 Score=35.68 Aligned_cols=42 Identities=14% Similarity=0.070 Sum_probs=32.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 50 (462)
.+||+++-.|+.| ..+|..|+++||+|+++......+.+.+.
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 44 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQTA 44 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHHT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHHC
Confidence 5799999887777 45688999999999999875444455544
No 133
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=60.91 E-value=7.1 Score=34.74 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
||||+. |+.|.+= -.|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 477763 4555543 45789999999999999754
No 134
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=60.33 E-value=82 Score=28.04 Aligned_cols=104 Identities=10% Similarity=0.076 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCc--chHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDY--NHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRND 78 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 78 (462)
+++||+++.++. || -+.+|..+-.+- +.+|..+.+.. ..+..++. |+.+..+|..... .
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~-----r 166 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH---------DIPYYHVPVDPKD-----K 166 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT---------TCCEEECCCCSSC-----C
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc---------CCCEEEcCCCcCC-----H
Confidence 467998887666 44 244444444322 47888777643 33444444 8888887642100 0
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccc
Q 044266 79 LGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPA 138 (462)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~ 138 (462)
..... ++++.+++ .++|+||.-.+.- ....+.+.+.-.++-++++
T Consensus 167 ---------~~~~~---~~~~~l~~---~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 167 ---------EPAFA---EVSRLVGH---HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ---------HHHHH---HHHHHHHH---TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ---------HHHHH---HHHHHHHH---hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 01122 33344444 8999999876543 4555566666667776654
No 135
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=59.98 E-value=7.1 Score=32.79 Aligned_cols=46 Identities=17% Similarity=0.133 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHh-CCCEEEEEeCCcchHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVK-HGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~v~~~ 50 (462)
+.||++...|+.+=+. ...+.+.|.+ +|++|.++.++.-...+...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred CCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 4588888777777555 5899999998 89999999998876666544
No 136
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=59.94 E-value=9 Score=29.86 Aligned_cols=47 Identities=21% Similarity=0.169 Sum_probs=35.0
Q ss_pred CCEEE-EEcCCCc-cChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 044266 4 RPHVL-AFPYPAQ-GHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 4 ~~~Il-~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 50 (462)
.||+| ++..|-. .-+.-.+-++..|.++||+|++++++.-...++..
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 45766 4444544 44455788899999999999999998877777655
No 137
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.91 E-value=6.9 Score=30.81 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 558888743 4443 67899999999999999875
No 138
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=59.80 E-value=34 Score=32.64 Aligned_cols=26 Identities=12% Similarity=0.153 Sum_probs=22.4
Q ss_pred CCceEEEeCCCcchHHHHHHHcCCceEEE
Q 044266 107 EKITCVVADGSMGWVMEVAEKMKLRRAAF 135 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~ 135 (462)
.+||++|.+.. ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 89999998853 577899999999985
No 139
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=59.61 E-value=9.9 Score=34.38 Aligned_cols=42 Identities=14% Similarity=0.113 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 50 (462)
++||+++-.|+.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 5799999888877 45788899999999999433345556555
No 140
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=59.30 E-value=41 Score=30.18 Aligned_cols=80 Identities=10% Similarity=0.067 Sum_probs=54.8
Q ss_pred CCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceE
Q 044266 32 GVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITC 111 (462)
Q Consensus 32 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dl 111 (462)
..+..+++.+.+.-..... |++...+.. ...+. ......+.++++.+++ .+..+
T Consensus 189 ~~~~~v~~H~af~Yfa~~y---------Gl~~~~~~~-~~~~~-------------eps~~~l~~l~~~ik~---~~v~~ 242 (312)
T 2o1e_A 189 EKKEFITQHTAFGYLAKEY---------GLKQVPIAG-LSPDQ-------------EPSAASLAKLKTYAKE---HNVKV 242 (312)
T ss_dssp SCCEEEESSCTTHHHHHHT---------TCEEEECSS-CCSSS-------------CCCHHHHHHHHHHTTS---SCCCE
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEEEeec-cCCCC-------------CCCHHHHHHHHHHHHH---cCCCE
Confidence 3455566677777777776 888776532 21111 1234557777777777 89999
Q ss_pred EEeCCCcc--hHHHHHHHcCCceEEEcc
Q 044266 112 VVADGSMG--WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 112 vi~D~~~~--~~~~~A~~lgiP~v~~~~ 137 (462)
|+++.... .+-.+|+..|++++.+.+
T Consensus 243 If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 243 IYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp EECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred EEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 99998777 467889999999887644
No 141
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=58.93 E-value=68 Score=25.65 Aligned_cols=145 Identities=17% Similarity=0.135 Sum_probs=81.2
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIAC 349 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~ 349 (462)
+|.|-|-.||.+ +.+..++....++..|.++-..+.+. .-.|+.+.+. +-+.. -...++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~----------~~~a~-~~g~~V-- 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEY----------AETAR-ERGLKV-- 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHHTT-TTTCCE--
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHH----------HHHHH-hCCCcE--
Confidence 567888888755 67778888888888888865555432 2233332211 10000 001223
Q ss_pred ceeccCch----hhhhhhhcCCceeccccccch--hhhH--HhHh-hhheeeEE-eecCCCCccCHHHHHHHHHHHhcCH
Q 044266 350 FLSHCGWN----STMEGVSNGVPFLCWPYFADQ--FLNE--SYIC-DIWKVGLR-FNKNKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 350 ~I~HgG~~----sv~eal~~GvP~l~~P~~~DQ--~~na--~~v~-~~~g~g~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
+|.=+|.. ++..++ .-+|+|.+|..... -..+ -.+. -. |+.+- +..++.+..++.-++..|. -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 77666644 333333 36899999975421 1111 1112 12 55421 2221013367777777776 55699
Q ss_pred HHHHHHHHHHHHHHhHhhc
Q 044266 420 NFKARALDLKETSLNSVRE 438 (462)
Q Consensus 420 ~~~~~a~~l~~~~~~~~~~ 438 (462)
+++++.+..+++.++.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999998876543
No 142
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=58.82 E-value=10 Score=32.38 Aligned_cols=29 Identities=7% Similarity=0.026 Sum_probs=24.0
Q ss_pred cccceeccCchhhhhhhhcCCceecccccc
Q 044266 347 IACFLSHCGWNSTMEGVSNGVPFLCWPYFA 376 (462)
Q Consensus 347 ~~~~I~HgG~~sv~eal~~GvP~l~~P~~~ 376 (462)
++.+|+.||....+..- .++|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 34499999999999986 579999999743
No 143
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=58.73 E-value=7.2 Score=29.60 Aligned_cols=40 Identities=10% Similarity=0.066 Sum_probs=26.8
Q ss_pred HHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHH---cCCceEEEc
Q 044266 94 LEELIENINRLENEKITCVVADGSMG--WVMEVAEK---MKLRRAAFW 136 (462)
Q Consensus 94 ~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~---lgiP~v~~~ 136 (462)
-.+.++.++. .+||+||.|...+ .+..+++. .++|++.++
T Consensus 42 g~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 42 MQEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 3444555555 8999999998777 45555554 478876543
No 144
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=58.71 E-value=23 Score=30.61 Aligned_cols=38 Identities=16% Similarity=0.016 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQ-----------GHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~-----------GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.|||++-.... -+..=++.--..|.++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468998776532 12455777788999999999999975
No 145
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=58.55 E-value=28 Score=30.29 Aligned_cols=47 Identities=13% Similarity=0.166 Sum_probs=38.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHH--------HHhC-CCEEEEEeCCcchHHHHH
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQC--------LVKH-GVKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~--------L~~r-Gh~Vt~~~~~~~~~~v~~ 49 (462)
++.+|++.+.++-.|-....-++.- |.++ |++|..+......+.+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~ 174 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIK 174 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHH
Confidence 3568999999999999999999977 9999 999999998765544433
No 146
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=58.28 E-value=76 Score=30.22 Aligned_cols=146 Identities=11% Similarity=0.012 Sum_probs=77.7
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHh-cCCceeecccCcccccCCCCc
Q 044266 269 QNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRV-ATRRQMVGWAPQQKVLTHPSI 347 (462)
Q Consensus 269 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~pq~~ll~~~~~ 347 (462)
++.++.|..|..+ ...++.|.+.|.++.++-... .+.+.+-. ..++.+..---+...|..+++
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~---------~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l 75 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF---------IPQFTVWANEGMLTLVEGPFDETLLDSCWL 75 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC---------CHHHHHHHTTTSCEEEESSCCGGGGTTCSE
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC---------CHHHHHHHhcCCEEEEECCCCccccCCccE
Confidence 3668888888644 244455666787776654321 12222211 134544322223344545555
Q ss_pred ccceeccCchh-----hhhhhhcCCce--eccccccchhhhHHhHhhh-heeeEEeecCCCCccCHHHHHHHHHHHhcCH
Q 044266 348 ACFLSHCGWNS-----TMEGVSNGVPF--LCWPYFADQFLNESYICDI-WKVGLRFNKNKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 348 ~~~I~HgG~~s-----v~eal~~GvP~--l~~P~~~DQ~~na~~v~~~-~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
+|..-|.-. ..+|-..|+|+ +--|-..+...-|. +.+. +-+|+. ..+....-+..|++.|...|.+.
T Consensus 76 --Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~-~~~~~l~iaIs--T~Gksp~la~~ir~~ie~~l~~~ 150 (457)
T 1pjq_A 76 --AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSI-IDRSPLMVAVS--SGGTSPVLARLLREKLESLLPQH 150 (457)
T ss_dssp --EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEE-EEETTEEEEEE--CTTSCHHHHHHHHHHHHHHSCTT
T ss_pred --EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeE-EEeCCeEEEEE--CCCCChHHHHHHHHHHHHhcchh
Confidence 888777654 44566679997 33343333322111 1221 234444 32223344688999999999653
Q ss_pred --HHHHHHHHHHHHHHhH
Q 044266 420 --NFKARALDLKETSLNS 435 (462)
Q Consensus 420 --~~~~~a~~l~~~~~~~ 435 (462)
.+.+.+.++++++++.
T Consensus 151 ~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 151 LGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 5666667777776654
No 147
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=58.27 E-value=71 Score=28.20 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCc--chHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDY--NHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRND 78 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 78 (462)
+++||+++.++.. | -+.+|...-.+- ..+|..+.+.. .....++. |+.++.+|.... +
T Consensus 89 ~~~ri~vl~Sg~g-~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~------~ 150 (286)
T 3n0v_A 89 HRPKVVIMVSKAD-H--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH---------KIPYYHFALDPK------D 150 (286)
T ss_dssp CCCEEEEEESSCC-H--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCBTT------B
T ss_pred CCcEEEEEEeCCC-C--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCCcC------C
Confidence 4679988876664 3 333444443321 36888777654 23444444 899888774210 1
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccc
Q 044266 79 LGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPA 138 (462)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~ 138 (462)
- ..... ++++.+++ .++|+||.-.+.- ....+-+.+.-.++-++++
T Consensus 151 r--------~~~~~---~~~~~l~~---~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 151 K--------PGQER---KVLQVIEE---TGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp H--------HHHHH---HHHHHHHH---HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred H--------HHHHH---HHHHHHHh---cCCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 0 01122 33344444 8999999876543 5666667777677776654
No 148
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=57.98 E-value=15 Score=35.23 Aligned_cols=26 Identities=8% Similarity=0.142 Sum_probs=22.4
Q ss_pred CCceEEEeCCCcchHHHHHHHcCCceEEE
Q 044266 107 EKITCVVADGSMGWVMEVAEKMKLRRAAF 135 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~ 135 (462)
.+||++|.+. ....+|+++|||++.+
T Consensus 374 ~~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 374 GQAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp HTCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred cCCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 7999999984 3678899999999975
No 149
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=57.65 E-value=11 Score=31.20 Aligned_cols=41 Identities=22% Similarity=0.377 Sum_probs=28.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHH-HHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLE-ISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 42 (462)
|++++||+++-.. .|+..-+.. +++.|.+.|++|.++.-..
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 6667899988877 888766554 4666667899998886543
No 150
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=57.61 E-value=11 Score=33.92 Aligned_cols=41 Identities=10% Similarity=-0.059 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc-hHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN-HKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-~~~v~~~ 50 (462)
++||+++-.|+.|- .+|..|+ +||+|+++..... .+.+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 57999998888875 5678888 9999999987653 4566665
No 151
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=57.43 E-value=17 Score=34.87 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=33.5
Q ss_pred cChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcC
Q 044266 16 GHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIP 67 (462)
Q Consensus 16 GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~ 67 (462)
++-.-++.+|+.|.+.|.++. ++......+++. |+.+..+.
T Consensus 32 ~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~ 72 (534)
T 4ehi_A 32 SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN---------GIKVIEVS 72 (534)
T ss_dssp SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEECB
T ss_pred cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC---------CCceeehh
Confidence 566779999999999998874 777888899888 77777665
No 152
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=56.56 E-value=9.9 Score=25.73 Aligned_cols=49 Identities=20% Similarity=0.142 Sum_probs=32.4
Q ss_pred hcCCceeccccccchhhhH-H--hHhhhheeeEEeecCCCCccCHHHHHHHHHHHhc
Q 044266 364 SNGVPFLCWPYFADQFLNE-S--YICDIWKVGLRFNKNKNGIITREEIMKKVDQVLE 417 (462)
Q Consensus 364 ~~GvP~l~~P~~~DQ~~na-~--~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~ 417 (462)
-+|+|++++-..+.|.+.- . ...+. |+...+- +..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhh----ccCCHHHHHHHHHHHHH
Confidence 3688888887776665422 2 22333 6665553 55789999999988873
No 153
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=56.20 E-value=1.1e+02 Score=27.12 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCc--chHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDY--NHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRND 78 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 78 (462)
++.||+++.++. || -+.+|..+-.+- ..+|..+.+.. .....++. |+.+..+|.... +
T Consensus 94 ~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~------~ 155 (292)
T 3lou_A 94 ARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH---------GLPFRHFPITAD------T 155 (292)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCCSS------C
T ss_pred CCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCCcC------C
Confidence 467998877665 44 344444444332 36887777654 23444444 899988775310 1
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCc-chHHHHHHHcCCceEEEccch
Q 044266 79 LGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSM-GWVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 139 (462)
- ......+.+.++. .++|+||.-.+. .....+-+.+.-.++-++++.
T Consensus 156 r--------~~~~~~~~~~l~~------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 203 (292)
T 3lou_A 156 K--------AQQEAQWLDVFET------SGAELVILARYMQVLSPEASARLANRAINIHHSF 203 (292)
T ss_dssp H--------HHHHHHHHHHHHH------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred H--------HHHHHHHHHHHHH------hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCCc
Confidence 0 0112223344444 899999987654 356666677776777766543
No 154
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=56.17 E-value=75 Score=25.30 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=79.7
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACF 350 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~ 350 (462)
|.|-|-.||.+ +.+..++....++..|..+-+.+.+. .-.|+.+. .|+.. +....++.+
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~----------~~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMF----------DYAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 46777778754 66777888888888887665544432 22333322 11111 111112337
Q ss_pred eeccCch----hhhhhhhcCCceeccccccch------hhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHH
Q 044266 351 LSHCGWN----STMEGVSNGVPFLCWPYFADQ------FLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDEN 420 (462)
Q Consensus 351 I~HgG~~----sv~eal~~GvP~l~~P~~~DQ------~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 420 (462)
|.=+|.. ++..++ .-+|+|.+|...-. ..-.-++-...+++...- ++.+.+++.-++..|..+ .|++
T Consensus 65 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I-~~ag~~nAa~lAa~Il~~-~d~~ 141 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAI-GMAGAKNAALFAASILQH-TDIN 141 (166)
T ss_dssp EEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCS-THHHHHHHHHHHHHHHGG-GCHH
T ss_pred EEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEec-CCccchHHHHHHHHHHcC-CCHH
Confidence 8776654 333333 35899999974321 111122332113333321 000145666777666554 5899
Q ss_pred HHHHHHHHHHHHHhHhhcC
Q 044266 421 FKARALDLKETSLNSVREG 439 (462)
Q Consensus 421 ~~~~a~~l~~~~~~~~~~~ 439 (462)
++++.+..++++++.+.+.
T Consensus 142 l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 142 IAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999998765543
No 155
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=55.99 E-value=14 Score=31.40 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=35.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.+|++..-|+.|-..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 467888889999999999999999999999999888765
No 156
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=55.88 E-value=75 Score=25.22 Aligned_cols=140 Identities=13% Similarity=0.156 Sum_probs=77.5
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACF 350 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~ 350 (462)
+.|-|-.||.+ +....++....++..|.++-..+.+. .-.|+...+. +-. .....++.+
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~~----------~~~---a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQF----------ASE---ARERGINII 62 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHHH----------HHH---HHhCCCcEE
Confidence 45666677644 66778888888888888865554432 2233332211 000 001112237
Q ss_pred eeccCch----hhhhhhhcCCceeccccccchh-----hhH-HhHhhhhee--eEEeecCCCCccCHHHHHHHHHHHhcC
Q 044266 351 LSHCGWN----STMEGVSNGVPFLCWPYFADQF-----LNE-SYICDIWKV--GLRFNKNKNGIITREEIMKKVDQVLED 418 (462)
Q Consensus 351 I~HgG~~----sv~eal~~GvP~l~~P~~~DQ~-----~na-~~v~~~~g~--g~~~~~~~~~~~~~~~l~~~i~~ll~~ 418 (462)
|.=+|.. ++..++ .-+|+|.+|....-. .++ -++-. |+ +... .++.+..++.-++..|..+ .|
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--GvPVatV~-I~~a~~~nAa~lAa~Il~~-~d 137 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPG--GIPVATTA-IGAAGAKNAGILAARMLSI-QN 137 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCT--TSCCEECC-STHHHHHHHHHHHHHHHHT-TC
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCC--CCceEEEE-cCCcccHHHHHHHHHHHhC-CC
Confidence 7766644 344333 558999999643211 111 12221 54 3332 1001346677777777554 58
Q ss_pred HHHHHHHHHHHHHHHhHh
Q 044266 419 ENFKARALDLKETSLNSV 436 (462)
Q Consensus 419 ~~~~~~a~~l~~~~~~~~ 436 (462)
++++++.+..++++++.+
T Consensus 138 ~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 138 PSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998888753
No 157
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=55.85 E-value=90 Score=26.09 Aligned_cols=104 Identities=18% Similarity=0.158 Sum_probs=56.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcch----HHHHHhhcCCCCCCCCeEEEEcCCC-CCCCCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNH----KRVVNALGQNNYIGDQIKLVSIPDG-MEPEGDR 76 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~i~~~~i~~~-~~~~~~~ 76 (462)
|+||+++.++..+- +.+|.+...+. ..+|.++.+.... +..++. |+.+..++.. +.
T Consensus 2 m~riavl~Sg~Gsn---l~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~---------gIp~~~~~~~~~~----- 64 (211)
T 3p9x_A 2 MKRVAIFASGSGTN---AEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH---------EIPVCALDPKTYP----- 64 (211)
T ss_dssp -CEEEEECCTTCHH---HHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT---------TCCEEECCGGGSS-----
T ss_pred CCEEEEEEeCCchH---HHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc---------CCCEEEeChhhcC-----
Confidence 35898888776544 44444444322 2588877765322 233333 7887765421 11
Q ss_pred CCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 77 NDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
+ .....+ ++++.+++ .+||++|+-.+.- ....+-+.....++-+.++.
T Consensus 65 -~--------r~~~d~---~~~~~l~~---~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpSL 113 (211)
T 3p9x_A 65 -S--------KEAYEI---EVVQQLKE---KQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSL 113 (211)
T ss_dssp -S--------HHHHHH---HHHHHHHH---TTCCEEEESSCCSCCCHHHHHHHTTSEEEEESSC
T ss_pred -c--------hhhhHH---HHHHHHHh---cCCCEEEEeCchhhcCHHHHhhccCCeEEECCcc
Confidence 0 011122 33444444 9999999876533 55555566666677665543
No 158
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=55.24 E-value=23 Score=28.81 Aligned_cols=42 Identities=14% Similarity=0.010 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|++..|++++-....=.-.=++.-.+.|.+.|++|++++...
T Consensus 4 m~~t~~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 677777776554332233446667788899999999999754
No 159
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=55.09 E-value=49 Score=28.38 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=20.2
Q ss_pred CEEE-EEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVL-AFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.+|| +.+.|.- -..-+-.....|+++|++|++++-
T Consensus 4 ~~vL~v~aHPDD-e~l~~Ggtia~~~~~G~~V~vv~l 39 (242)
T 2ixd_A 4 LHILAFGAHADD-VEIGMAGTIAKYTKQGYEVGICDL 39 (242)
T ss_dssp CSEEEEESSTTH-HHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccEEEEEeCCCh-HHHhHHHHHHHHHHCCCeEEEEEE
Confidence 4555 5554432 233334444566679999888863
No 160
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=54.84 E-value=48 Score=30.27 Aligned_cols=39 Identities=10% Similarity=0.052 Sum_probs=32.5
Q ss_pred CEEEEEc-CCCccChHHHHHHHHHHH--hCCCEEEEEeCCcc
Q 044266 5 PHVLAFP-YPAQGHVIPLLEISQCLV--KHGVKVTFLNTDYN 43 (462)
Q Consensus 5 ~~Il~~~-~~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~~ 43 (462)
.+|++++ -|+.|-..-...||..|+ ++|++|.++.....
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 4666555 466699999999999999 89999999999854
No 161
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=54.74 E-value=58 Score=29.62 Aligned_cols=100 Identities=12% Similarity=0.110 Sum_probs=58.8
Q ss_pred EEEEEcCCCcc--C--hHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHH
Q 044266 6 HVLAFPYPAQG--H--VIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGM 81 (462)
Q Consensus 6 ~Il~~~~~~~G--H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 81 (462)
-|++.|..+.. . ..-+.+|++.|.++|++|.++..+...+..++..... +-....+.. ..+
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l~g-------~~s--- 251 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVATG-------KFQ--- 251 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEECTT-------CCC---
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEeeC-------CCC---
Confidence 46666655443 2 2358899999998999999987776655544432110 000111100 111
Q ss_pred HHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEccch
Q 044266 82 LTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~~~ 139 (462)
+.++...+ .+.|++|+.. .....+|..+|+|+|.++...
T Consensus 252 ------------l~e~~ali-----~~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 252 ------------LGPLAAAM-----NRCNLLITND--SGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp ------------HHHHHHHH-----HTCSEEEEES--SHHHHHHHTTTCCEEEECSSC
T ss_pred ------------HHHHHHHH-----HhCCEEEECC--CCHHHHHHhcCCCEEEEECCC
Confidence 23333333 4567888742 556777899999999976543
No 162
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=54.72 E-value=62 Score=31.22 Aligned_cols=93 Identities=12% Similarity=0.059 Sum_probs=52.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc-hHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN-HKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGML 82 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 82 (462)
..|++++..+ . -.+.+++.|.+-|-+|..+++... .+..+..... ...+..... ..++
T Consensus 348 GKrv~i~g~~--~---~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~---~~~~~~i~~----------~~d~--- 406 (492)
T 3u7q_A 348 GKRVMLYIGG--L---RPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKE---MGDSTLLYD----------DVTG--- 406 (492)
T ss_dssp TCEEEECBSS--S---HHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTT---SCTTCEEEE----------SCBH---
T ss_pred CCEEEEECCC--c---hHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHh---CCCCcEEEc----------CCCH---
Confidence 3477774433 2 356677888889999988776542 3323222100 000111110 0111
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEE
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAF 135 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~ 135 (462)
..+.++++. .+||++|.. .....+|+++|||++.+
T Consensus 407 ---------~el~~~i~~------~~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 ---------YEFEEFVKR------IKPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp ---------HHHHHHHHH------HCCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred ---------HHHHHHHHh------cCCcEEEeC---cchhHHHHHcCCCEEec
Confidence 123344444 799999997 44578899999999964
No 163
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=54.59 E-value=78 Score=27.66 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.|+++++.++.| =-.++|+.|+++|++|.++.-..
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 3467788866653 23578999999999999887654
No 164
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=54.51 E-value=8.9 Score=31.90 Aligned_cols=30 Identities=7% Similarity=0.101 Sum_probs=24.7
Q ss_pred CcccceeccCchhhhhhhhcCCceecccccc
Q 044266 346 SIACFLSHCGWNSTMEGVSNGVPFLCWPYFA 376 (462)
Q Consensus 346 ~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~ 376 (462)
.++.+|+.||....+..- .++|+|-+|..+
T Consensus 51 ~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 344499999999999986 579999999754
No 165
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=54.50 E-value=66 Score=27.77 Aligned_cols=31 Identities=16% Similarity=0.044 Sum_probs=25.8
Q ss_pred CCceEEEeCCCcc------hHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMG------WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~------~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||+-.... .+..+|..+|+|.+....
T Consensus 112 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 112 EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 6799999876552 688999999999998754
No 166
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=54.43 E-value=85 Score=25.42 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=81.5
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIAC 349 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~ 349 (462)
-|.|-|-.||.+ +.+..++....++..|.++-..+.+. .-.|+.+.+. +-+.. =...++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~----------~~~a~-~~g~~V-- 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFEY----------AKNAE-ERGIEV-- 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHHH----------HHHTT-TTTCCE--
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHH----------HHHHH-hCCCcE--
Confidence 357888888755 67778888888888888765554432 2233332211 10000 011233
Q ss_pred ceeccCch----hhhhhhhcCCceeccccccc--hhhhH-HhHhhhh--eeeEE-eecCCCCccCHHHHHHHHHHHhcCH
Q 044266 350 FLSHCGWN----STMEGVSNGVPFLCWPYFAD--QFLNE-SYICDIW--KVGLR-FNKNKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 350 ~I~HgG~~----sv~eal~~GvP~l~~P~~~D--Q~~na-~~v~~~~--g~g~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
+|.=+|.. ++..++ .-+|+|.+|.... .-..+ --+.. + |+.+. +.. ++..++.-++..|. -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~ 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GIKYP 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hcCCH
Confidence 77666643 444444 5689999997542 11122 11122 3 53321 112 25578888887776 45689
Q ss_pred HHHHHHHHHHHHHHhHhh
Q 044266 420 NFKARALDLKETSLNSVR 437 (462)
Q Consensus 420 ~~~~~a~~l~~~~~~~~~ 437 (462)
+++++.+..+++....+.
T Consensus 147 ~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 147 EIARKVKEYKERMKREVL 164 (183)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999988887543
No 167
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=54.05 E-value=12 Score=31.56 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=26.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|.++++|++. |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 1 M~~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 5556787764 4445443 478899999999999988653
No 168
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=54.05 E-value=11 Score=31.80 Aligned_cols=110 Identities=11% Similarity=0.014 Sum_probs=60.9
Q ss_pred CEEEEEcCCCccChHH----HHHHHHHHHh-CCCEEEEEeCCcc-hHHHHHhhcCCCCCCCCeE-EEEcCCCCCCCCCCC
Q 044266 5 PHVLAFPYPAQGHVIP----LLEISQCLVK-HGVKVTFLNTDYN-HKRVVNALGQNNYIGDQIK-LVSIPDGMEPEGDRN 77 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p----~l~La~~L~~-rGh~Vt~~~~~~~-~~~v~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~ 77 (462)
..|+++.-...|.+++ ++..|+.|++ .|-+|+.++.... .+.+++... . |.. .+.+.+..-. ..
T Consensus 4 ~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~-~-----Gad~v~~v~~~~~~---~~ 74 (217)
T 3ih5_A 4 NNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP-Y-----GVDKLHVFDAEGLY---PY 74 (217)
T ss_dssp CCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG-G-----TCSEEEEEECGGGS---SC
T ss_pred ccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh-c-----CCCEEEEecCcccc---cC
Confidence 4688877666676665 5777888876 3767776654432 222222211 0 322 2222211000 00
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc---hHHHHHHHcCCceEEEcc
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG---WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~---~~~~~A~~lgiP~v~~~~ 137 (462)
+. ......+.++++. .+||+||+-.... .+..+|.++|+|.+.-++
T Consensus 75 ~~--------~~~a~~l~~~i~~------~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~ 123 (217)
T 3ih5_A 75 TS--------LPHTSILVNLFKE------EQPQICLMGATVIGRDLGPRVSSALTSGLTADCT 123 (217)
T ss_dssp CH--------HHHHHHHHHHHHH------HCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCS
T ss_pred CH--------HHHHHHHHHHHHh------cCCCEEEEeCCcchhhHHHHHHHHhCCCccceEE
Confidence 11 1122334455555 7899999886554 466889999999997443
No 169
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=52.55 E-value=1.2e+02 Score=26.66 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=56.5
Q ss_pred CEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEE
Q 044266 33 VKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCV 112 (462)
Q Consensus 33 h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlv 112 (462)
.+..+++.+.+.-..... |++...+.. . + .......+.++++.+++ .+..+|
T Consensus 190 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~--~-------------~eps~~~l~~l~~~ik~---~~v~~I 241 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDY---------NLVQIPIEV-E--G-------------QEPSAQELKQLIDTAKE---NNLTMV 241 (291)
T ss_dssp CCEEEESSCCCHHHHHHT---------TCEEEESCB-T--T-------------BCCCHHHHHHHHHHHHT---TTCCEE
T ss_pred CCEEEEECCchHHHHHHC---------CCEEeeccc-C--C-------------CCCCHHHHHHHHHHHHH---cCCCEE
Confidence 344556666677777776 888776542 1 1 12234557777777777 899999
Q ss_pred EeCCCcc--hHHHHHHHcCCceEEEccchh
Q 044266 113 VADGSMG--WVMEVAEKMKLRRAAFWPAAA 140 (462)
Q Consensus 113 i~D~~~~--~~~~~A~~lgiP~v~~~~~~~ 140 (462)
+++.... .+-.+|+..|++.+.+.+...
T Consensus 242 f~e~~~~~~~~~~ia~~~g~~v~~ld~l~~ 271 (291)
T 1pq4_A 242 FGETQFSTKSSEAIAAEIGAGVELLDPLAA 271 (291)
T ss_dssp EEETTSCCHHHHHHHHHHTCEEEEECTTCS
T ss_pred EEeCCCChHHHHHHHHHcCCeEEEEcCchh
Confidence 9998776 566889999999998877654
No 170
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=52.09 E-value=65 Score=27.76 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-...
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCChH
Confidence 356777766543 345789999999999999876543
No 171
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=52.06 E-value=92 Score=26.45 Aligned_cols=32 Identities=6% Similarity=0.009 Sum_probs=24.1
Q ss_pred CceEEE-eCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 108 KITCVV-ADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 108 ~~Dlvi-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
.||+|| +|+..- .++.-|.++|||+|.++-+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 699877 565444 67778999999999976443
No 172
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=51.82 E-value=39 Score=29.81 Aligned_cols=80 Identities=10% Similarity=0.079 Sum_probs=52.8
Q ss_pred CCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceE
Q 044266 32 GVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITC 111 (462)
Q Consensus 32 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dl 111 (462)
..+..+.+.+.+.-..... |++...+...-+.. ......+.++++.+++ .+..+
T Consensus 176 ~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~--------------eps~~~l~~l~~~ik~---~~v~~ 229 (284)
T 3cx3_A 176 TQKTFVTQHTAFSYLAKRF---------GLNQLGIAGISPEQ--------------EPSPRQLTEIQEFVKT---YKVKT 229 (284)
T ss_dssp SCCCEEEEESCCHHHHHHT---------TCCEEEEECSSTTC--------------CCCSHHHHHHHHHHHH---TTCCC
T ss_pred CCCEEEEECCchHHHHHHc---------CCEEeeccCCCCCC--------------CCCHHHHHHHHHHHHH---cCCCE
Confidence 3444566677777777777 77765543111111 1233456667677776 89999
Q ss_pred EEeCCCcc--hHHHHHHHcCCceEEEcc
Q 044266 112 VVADGSMG--WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 112 vi~D~~~~--~~~~~A~~lgiP~v~~~~ 137 (462)
|+++.... .+-.+|+..|++++.+.+
T Consensus 230 if~e~~~~~~~~~~ia~~~g~~v~~l~~ 257 (284)
T 3cx3_A 230 IFTESNASSKVAETLVKSTGVGLKTLNP 257 (284)
T ss_dssp EEECSSSCCHHHHHHHSSSSCCEEECCC
T ss_pred EEEeCCCCcHHHHHHHHHcCCeEEEecC
Confidence 99998776 567889999999987643
No 173
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=51.40 E-value=7.8 Score=33.87 Aligned_cols=52 Identities=12% Similarity=0.085 Sum_probs=36.3
Q ss_pred cccceeccCchhhhhhhhc---CCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcC
Q 044266 347 IACFLSHCGWNSTMEGVSN---GVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLED 418 (462)
Q Consensus 347 ~~~~I~HgG~~sv~eal~~---GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~ 418 (462)
.+++|+=||-||+++++.. ++|++.++.. . +|.- ..+.++++.++++++++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl--------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFL--------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCcc--------CcCCHHHHHHHHHHHHcC
Confidence 3449999999999999876 8888887531 0 1211 124577888888888754
No 174
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=51.38 E-value=72 Score=26.97 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=19.1
Q ss_pred CEEE-EEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVL-AFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
++|| +.+.|.-= ..-+-.+...|+++|++|++++-
T Consensus 2 ~~vL~v~aHPDDe-~l~~ggtia~~~~~G~~v~vv~l 37 (227)
T 1uan_A 2 LDLLVVAPHPDDG-ELGCGGTLARAKAEGLSTGILDL 37 (227)
T ss_dssp EEEEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ceEEEEEeCCCcH-HHhHHHHHHHHHhCCCcEEEEEE
Confidence 3565 44444322 23333444455689999877763
No 175
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=51.20 E-value=76 Score=27.63 Aligned_cols=31 Identities=23% Similarity=0.073 Sum_probs=26.0
Q ss_pred CCceEEEeCCCcc------hHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMG------WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~------~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||+-.... .+..+|..||+|.+...+
T Consensus 111 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 111 EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 6899999886552 688999999999998764
No 176
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=51.17 E-value=51 Score=31.36 Aligned_cols=34 Identities=12% Similarity=0.247 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.|||++. .|. -.+.+++++.+.|++|.++.+...
T Consensus 7 k~ILI~g---~g~--~~~~i~~a~~~~G~~vv~v~~~~~ 40 (461)
T 2dzd_A 7 RKVLVAN---RGE--IAIRVFRACTELGIRTVAIYSKED 40 (461)
T ss_dssp SEEEECS---CHH--HHHHHHHHHHHHTCEEEEEECGGG
T ss_pred cEEEEEC---CcH--HHHHHHHHHHHcCCEEEEEECCcc
Confidence 4788763 232 356789999999999999876543
No 177
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=51.11 E-value=17 Score=32.37 Aligned_cols=36 Identities=22% Similarity=0.213 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|.+++||.++-.|..|. .+|+.|.+.||+|+++...
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 66778999998777764 4578888999999876543
No 178
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=50.89 E-value=27 Score=35.18 Aligned_cols=95 Identities=12% Similarity=0.053 Sum_probs=56.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc-----------hHHHHHhhcCCCCCCCCeEEEEcCCCCCCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN-----------HKRVVNALGQNNYIGDQIKLVSIPDGMEPE 73 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-----------~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~ 73 (462)
+||+|+..+..| ....+.|.++||+|..+.+... ++...+. |+.+.....-
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~---------~ip~~~~~~~---- 62 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPDNV---- 62 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHH---------TCCEECCSCT----
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHc---------CCCEeccCCC----
Confidence 478887654322 2335667778999988887543 2334444 6766542210
Q ss_pred CCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCc-chHHHHHHHcCCceEEEccch
Q 044266 74 GDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSM-GWVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~-~~~~~~A~~lgiP~v~~~~~~ 139 (462)
.. + ++++.++. .+||++|+-.+. .....+-+.....++-++++.
T Consensus 63 ---~~-------------~---~~~~~l~~---~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 63 ---NH-------------P---LWVERIAQ---LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp ---TS-------------H---HHHHHHHH---HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred ---Cc-------------H---HHHHHHHh---cCCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 00 1 23334444 799999987553 355566666667778877774
No 179
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=50.77 E-value=22 Score=26.12 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=27.1
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc-------CCceEEEccch
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEKM-------KLRRAAFWPAA 139 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 139 (462)
+.++.+.. .+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 37 ~al~~l~~---~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 37 IALEKLSE---FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHTT---BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHh---cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 33444444 7899999997665 455555543 58888876544
No 180
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.44 E-value=20 Score=32.03 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc-chHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY-NHKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~-~~~~v~~~ 50 (462)
++||+++-.|..|. .+|..|+++||+|+++.... ..+.+.+.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 45 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQWPAHIEAIRKN 45 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence 46999987766664 56888999999999987643 23344444
No 181
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=49.66 E-value=90 Score=30.32 Aligned_cols=34 Identities=12% Similarity=-0.026 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
..||.|+-.++.| +-.+|+.|.++|++|+..=..
T Consensus 19 ~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~~ 52 (524)
T 3hn7_A 19 GMHIHILGICGTF----MGSLALLARALGHTVTGSDAN 52 (524)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECCC
Confidence 4688898888766 667899999999999987543
No 182
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=49.62 E-value=18 Score=27.78 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=25.3
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-------CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-------KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 139 (462)
.+||+||.|...+ -|..+++++ ++|++.++...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 7999999998877 677776654 48888776544
No 183
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=49.49 E-value=14 Score=32.58 Aligned_cols=36 Identities=22% Similarity=0.187 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|++..||.++-.|..| ..+|+.|+++||+|++....
T Consensus 1 Mm~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 1 MTGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 6666799999766666 46889999999999997654
No 184
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=49.13 E-value=28 Score=25.77 Aligned_cols=65 Identities=6% Similarity=-0.002 Sum_probs=44.0
Q ss_pred cCCCCcccceeccCchh---------hhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHH
Q 044266 342 LTHPSIACFLSHCGWNS---------TMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKV 412 (462)
Q Consensus 342 l~~~~~~~~I~HgG~~s---------v~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i 412 (462)
+..+++ +|--.|..| +-.|...|+|++++=-++.+. .-..+++. +..+. ..+.+.|.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~iV-------~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEVV-------GWNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEEE-------CSCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cceec-------cCCHHHHHHHH
Confidence 444666 999999888 667889999998885444432 22234442 33222 27899999999
Q ss_pred HHHhc
Q 044266 413 DQVLE 417 (462)
Q Consensus 413 ~~ll~ 417 (462)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 98863
No 185
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=48.97 E-value=29 Score=30.66 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=23.6
Q ss_pred CCCCEEEEE-cCCCccChHHH--HHHHHHHHhCCCEEEEEe
Q 044266 2 LRRPHVLAF-PYPAQGHVIPL--LEISQCLVKHGVKVTFLN 39 (462)
Q Consensus 2 ~~~~~Il~~-~~~~~GH~~p~--l~La~~L~~rGh~Vt~~~ 39 (462)
++.||||++ ..|-....+-. -.+.+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 346788854 45544434432 245677888999999874
No 186
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=48.70 E-value=31 Score=26.37 Aligned_cols=42 Identities=5% Similarity=-0.057 Sum_probs=30.3
Q ss_pred CCEEEE-EcCC--CccChHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 044266 4 RPHVLA-FPYP--AQGHVIPLLEISQCLVKHGVKVTFLNTDYNHK 45 (462)
Q Consensus 4 ~~~Il~-~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 45 (462)
+.|+++ +..+ +.......+.+|...+..||+|+++-+..-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 347664 4444 34566678888999999999999998876443
No 187
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=48.63 E-value=57 Score=31.55 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=34.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
.|+++..++-|-..-+..||..|+++|++|.++..+.+.
T Consensus 103 vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 103 VIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 577888888899999999999999999999999986544
No 188
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=47.86 E-value=27 Score=26.88 Aligned_cols=39 Identities=15% Similarity=0.063 Sum_probs=29.0
Q ss_pred EEE-EEcCCCccChHH--HHHHHHHHHhCCCEEEEEeCCcch
Q 044266 6 HVL-AFPYPAQGHVIP--LLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 6 ~Il-~~~~~~~GH~~p--~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
|++ ++..+.+|+... .+.+|..+...||+|.++-...-.
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV 48 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGV 48 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHH
Confidence 565 566667787655 467799999999999998876543
No 189
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=47.68 E-value=26 Score=30.57 Aligned_cols=49 Identities=12% Similarity=0.148 Sum_probs=32.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchH-HHHHhhcCCCCCCCCeEEEEc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHK-RVVNALGQNNYIGDQIKLVSI 66 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~v~~~~~~~~~~~~~i~~~~i 66 (462)
++||++.. + |.+- ..|++.|.++||+|+.++-..... .+... +++++..
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~ 54 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNPDQMEAIRAS---------GAEPLLW 54 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCGGGHHHHHHT---------TEEEEES
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcChhhhhhHhhC---------CCeEEEe
Confidence 35777753 5 6554 467899999999999998765432 23332 6777653
No 190
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=47.21 E-value=36 Score=26.39 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=30.1
Q ss_pred CCEEE-EEcCCCccChHH--HHHHHHHHHhCCCEE-EEEeCCcch
Q 044266 4 RPHVL-AFPYPAQGHVIP--LLEISQCLVKHGVKV-TFLNTDYNH 44 (462)
Q Consensus 4 ~~~Il-~~~~~~~GH~~p--~l~La~~L~~rGh~V-t~~~~~~~~ 44 (462)
.+|++ +++.+.+|+-.. .+.+|+.+.+.||+| .++-...-.
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV 56 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGV 56 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHH
Confidence 35665 667777777665 567799999999999 887765443
No 191
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=47.16 E-value=14 Score=34.06 Aligned_cols=36 Identities=11% Similarity=0.167 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|++++||.|+-.+..| ..+|+.|+++||+|+++...
T Consensus 19 Mm~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hhcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 5567899998776655 46789999999999988654
No 192
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=47.10 E-value=1.4e+02 Score=25.85 Aligned_cols=31 Identities=6% Similarity=-0.063 Sum_probs=20.8
Q ss_pred CCceEEEeCCCcch----HHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMGW----VMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~----~~~~A~~lgiP~v~~~~ 137 (462)
.++|.||..+.... ....+...|||+|.+..
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 60 KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred hCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 58898887654432 33445667999998754
No 193
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=46.74 E-value=35 Score=29.40 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQG-----------HVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.|||++.....+ ...=++.....|.+.|++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5689887765322 22457777888999999999999753
No 194
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=46.63 E-value=54 Score=29.00 Aligned_cols=105 Identities=12% Similarity=0.056 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCc---chHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDY---NHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRN 77 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~---~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 77 (462)
++.||+++.++..+.+. +|.++-.+- ..+|.++.+.. ..+..++ .|+.++.+|....
T Consensus 88 ~~~ri~vl~Sg~g~nl~---~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~---------~gIp~~~~~~~~~------ 149 (288)
T 3obi_A 88 TRRKVMLLVSQSDHCLA---DILYRWRVGDLHMIPTAIVSNHPRETFSGFDF---------GDIPFYHFPVNKD------ 149 (288)
T ss_dssp SCEEEEEEECSCCHHHH---HHHHHHHTTSSCEEEEEEEESSCGGGSCCTTT---------TTCCEEECCCCTT------
T ss_pred CCcEEEEEEcCCCCCHH---HHHHHHHCCCCCeEEEEEEcCCChhHHHHHHH---------cCCCEEEeCCCcc------
Confidence 46789888766644333 333333321 25777776644 1222222 3888888764310
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
+- ..... ++++.+++ .++|+||.-.+.- ....+-+.+.-.++-++++.
T Consensus 150 ~r--------~~~~~---~~~~~l~~---~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSl 198 (288)
T 3obi_A 150 TR--------RQQEA---AITALIAQ---THTDLVVLARYMQILSDEMSARLAGRCINIHHSF 198 (288)
T ss_dssp TH--------HHHHH---HHHHHHHH---HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred cH--------HHHHH---HHHHHHHh---cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCccc
Confidence 00 11122 33344444 8999999876543 56666677776777766543
No 195
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=46.57 E-value=16 Score=30.03 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=28.8
Q ss_pred hhhheeeEEeecCCCCccCHHHHHHHHHHHhcC-H------HHHHHHHHHHHHHHh
Q 044266 386 CDIWKVGLRFNKNKNGIITREEIMKKVDQVLED-E------NFKARALDLKETSLN 434 (462)
Q Consensus 386 ~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~-~------~~~~~a~~l~~~~~~ 434 (462)
+++.|||+.+ |++++.++|.+.+++ . +|+ +.-.+-...++
T Consensus 108 e~~cGVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 108 NENSGVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp HHTTTTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred HHHCCCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 4447999988 899999999999953 2 355 55555555554
No 196
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=46.22 E-value=43 Score=31.81 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=34.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHK 45 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 45 (462)
-+++...|+.|=..-++.+|...+.+|..|.+++.....+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKK 238 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTT
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHH
Confidence 4677788899999999999999998999999999876543
No 197
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=46.14 E-value=1.1e+02 Score=24.47 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=78.6
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIAC 349 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~ 349 (462)
+|.|-|-.||.+ +....++....++..|.++-+.+.+. .-.|+.+.+. +-.. --...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~~~----------~~~a-~~~g~~V-- 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMFSY----------ARGA-AARGLEV-- 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------HHHH-HHHTCCE--
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHHHH----------HHHH-HhCCCCE--
Confidence 345667777644 66778888888888888865554432 2233332211 0000 0012234
Q ss_pred ceeccCch----hhhhhhhcCCceeccccccchh------hhHHhHhhhhee--eEEeecCCCCccCHHHHHHHHHHHhc
Q 044266 350 FLSHCGWN----STMEGVSNGVPFLCWPYFADQF------LNESYICDIWKV--GLRFNKNKNGIITREEIMKKVDQVLE 417 (462)
Q Consensus 350 ~I~HgG~~----sv~eal~~GvP~l~~P~~~DQ~------~na~~v~~~~g~--g~~~~~~~~~~~~~~~l~~~i~~ll~ 417 (462)
+|.=+|.. ++..++ .-+|+|.+|...-.. .-.-++- . |+ +... . ++..++.-++..|..+ .
T Consensus 66 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp-~-GvpVatV~-I--~~~~nAa~lAa~Il~~-~ 138 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMP-A-GVPVATVS-I--GGAGNAGLLAVRMLGA-A 138 (174)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCC-T-TCCCEECC-T--TCHHHHHHHHHHHHHT-T
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCC-C-CCeeEEEE-c--CcchHHHHHHHHHHhC-C
Confidence 77766644 344333 558999999752211 1111222 1 53 3332 1 2556777777777655 5
Q ss_pred CHHHHHHHHHHHHHHHhH
Q 044266 418 DENFKARALDLKETSLNS 435 (462)
Q Consensus 418 ~~~~~~~a~~l~~~~~~~ 435 (462)
|++++++.+..+++.++.
T Consensus 139 d~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 139 NPQLRARIVAFQDRLADV 156 (174)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999988874
No 198
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=46.03 E-value=35 Score=25.85 Aligned_cols=40 Identities=5% Similarity=0.035 Sum_probs=28.8
Q ss_pred EEE-EEcCCCccC--hHHHHHHHHHHHhCCCEE-EEEeCCcchH
Q 044266 6 HVL-AFPYPAQGH--VIPLLEISQCLVKHGVKV-TFLNTDYNHK 45 (462)
Q Consensus 6 ~Il-~~~~~~~GH--~~p~l~La~~L~~rGh~V-t~~~~~~~~~ 45 (462)
|++ +++.+.+|+ ....+.+|..+.+.||+| +++-...-..
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~ 45 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVN 45 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHH
Confidence 454 555666654 456788899999999999 8888765443
No 199
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=45.93 E-value=15 Score=33.01 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 20 PLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 20 p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.-.++|+.+.++|++|+|++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 567889999999999999997643
No 200
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=45.89 E-value=77 Score=24.86 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=54.6
Q ss_pred EEEEEcCCCcc---ChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHH
Q 044266 6 HVLAFPYPAQG---HVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGML 82 (462)
Q Consensus 6 ~Il~~~~~~~G---H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 82 (462)
.++++++|+.+ ...-+..+.+.|.+.+.+|.+++.....+. ...++.+..+-
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~----------~~~~v~~~~~~--------------- 76 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDT----------LGLNTRLYKWI--------------- 76 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTT----------CCTTEEEESSC---------------
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCccc----------CCCcEEEecCC---------------
Confidence 56677778776 445566778888777888888776543211 11245544211
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
.. .+++.. ...|++|+... ..+..-|-.+|+|.+.+-.
T Consensus 77 --------~~--~~~l~~------~~ad~~I~~~G-~~t~~Ea~~~G~P~i~~p~ 114 (170)
T 2o6l_A 77 --------PQ--NDLLGH------PKTRAFITHGG-ANGIYEAIYHGIPMVGIPL 114 (170)
T ss_dssp --------CH--HHHHTS------TTEEEEEECCC-HHHHHHHHHHTCCEEECCC
T ss_pred --------CH--HHHhcC------CCcCEEEEcCC-ccHHHHHHHcCCCEEeccc
Confidence 11 122221 57899998643 3455557778999998754
No 201
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=45.29 E-value=93 Score=26.13 Aligned_cols=43 Identities=12% Similarity=0.017 Sum_probs=32.3
Q ss_pred EEEEEcCCCccChHHHHHHHHH-HHhCCCEEEEEeCCcchHHHH
Q 044266 6 HVLAFPYPAQGHVIPLLEISQC-LVKHGVKVTFLNTDYNHKRVV 48 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~-L~~rGh~Vt~~~~~~~~~~v~ 48 (462)
-+++...|+.|-..-++.+|.. +.+.|..|.+++.....+.+.
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLR 75 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHH
Confidence 4567778888998888998766 455688999999876655443
No 202
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=45.11 E-value=1.7e+02 Score=26.11 Aligned_cols=102 Identities=17% Similarity=0.200 Sum_probs=56.3
Q ss_pred EEEEEcCCCcc---ChH--HHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHH
Q 044266 6 HVLAFPYPAQG---HVI--PLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLG 80 (462)
Q Consensus 6 ~Il~~~~~~~G---H~~--p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 80 (462)
.|++.|....+ .+. -+.++++.|.++|++|.++..+...+............ .......+.. ..
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~-~~~~~~~l~g-------~~--- 250 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTE-QQAWCRNLAG-------ET--- 250 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHH-HHTTEEECTT-------TS---
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhc-cccceEeccC-------cC---
Confidence 46666644222 232 68899999998999999887766544433321000000 0001111110 01
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
.+.++...+ ..-|++|+.. .....+|..+|+|+|.++.
T Consensus 251 ------------sl~e~~ali-----~~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 251 ------------QLDQAVILI-----AACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp ------------CHHHHHHHH-----HTSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred ------------CHHHHHHHH-----HhCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 133344443 4578888753 4567778899999999764
No 203
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=44.62 E-value=20 Score=27.10 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+||+++-. |.+- ..+++.|.++||+|+++....
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 468888743 5543 357899999999999987643
No 204
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.55 E-value=28 Score=27.23 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
..+|+++..|..| ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 4688887544333 557889999999999997653
No 205
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=44.36 E-value=44 Score=31.58 Aligned_cols=25 Identities=4% Similarity=-0.047 Sum_probs=19.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGV 33 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh 33 (462)
++|||++..+++ -.+||+.|.+.+.
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 469999987754 4468999988775
No 206
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=44.07 E-value=62 Score=28.58 Aligned_cols=108 Identities=7% Similarity=0.016 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHH
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLG 80 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 80 (462)
++.||+++.++..+-+ .+|.+...+. ..+|..+.+..... +.+. ....|+.+..+|.... +
T Consensus 87 ~~~ri~vl~Sg~g~nl---~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~-----A~~~gIp~~~~~~~~~------~-- 149 (287)
T 3nrb_A 87 DRKKVVIMVSKFDHCL---GDLLYRHRLGELDMEVVGIISNHPRE-ALSV-----SLVGDIPFHYLPVTPA------T-- 149 (287)
T ss_dssp CCCEEEEEECSCCHHH---HHHHHHHHHTSSCCEEEEEEESSCGG-GCCC-----CCCTTSCEEECCCCGG------G--
T ss_pred CCcEEEEEEeCCCcCH---HHHHHHHHCCCCCeEEEEEEeCChHH-HHHH-----HHHcCCCEEEEeccCc------c--
Confidence 4679988876664333 3444444332 36888777654321 2211 1113888887764210 0
Q ss_pred HHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 81 MLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
...... ++++.+++ .++|+||.-.+.- ....+.+.+.-.++-++++.
T Consensus 150 ------r~~~~~---~~~~~l~~---~~~Dlivlagym~il~~~~l~~~~~~~iNiHpSl 197 (287)
T 3nrb_A 150 ------KAAQES---QIKNIVTQ---SQADLIVLARYMQILSDDLSAFLSGRCINIHHSF 197 (287)
T ss_dssp ------HHHHHH---HHHHHHHH---HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESSC
T ss_pred ------hhhHHH---HHHHHHHH---hCCCEEEhhhhhhhcCHHHHhhccCCeEEECccc
Confidence 011122 33444444 8999999876543 56666677777777766543
No 207
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=43.52 E-value=50 Score=29.75 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.++||.|+-.++.| +-.+|+.|+++||+|+..=..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 35689999988877 446999999999999987654
No 208
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=43.48 E-value=21 Score=32.20 Aligned_cols=34 Identities=9% Similarity=0.157 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
++||+++..+ ....++++|.++||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 5799988765 467889999999999999887654
No 209
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=43.46 E-value=68 Score=30.32 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.||+++.. | .....+++++.+.|++|+++.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHSS 34 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEecc
Confidence 37887653 3 34567999999999999988754
No 210
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=43.39 E-value=1.5e+02 Score=26.24 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=32.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
.|+++..++-|-..-+..||..|+.+|++|.++..+...
T Consensus 100 vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 100 VIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 345666667799999999999999999999999987543
No 211
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=43.38 E-value=1.5e+02 Score=25.12 Aligned_cols=36 Identities=17% Similarity=-0.004 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467777766543 24688999999999999887643
No 212
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=43.30 E-value=51 Score=27.20 Aligned_cols=140 Identities=9% Similarity=0.010 Sum_probs=71.9
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeeccc-----CcccccCC
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWA-----PQQKVLTH 344 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----pq~~ll~~ 344 (462)
+.+++.-.|+..... ...+++.|.+.|+++-++.... ...-+.....+.+.++++..-|- .+-.+...
T Consensus 9 k~IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~----A~~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~ 81 (194)
T 1p3y_1 9 KKLLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKT----AEDLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRW 81 (194)
T ss_dssp CEEEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHH----HHHHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHH
T ss_pred CEEEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchh----HHHHHHHHHHHHhcCCEeccccccCCCcCccccccc
Confidence 346666667765432 2345566666677766555432 00111111112334442211222 22223233
Q ss_pred CCcccceeccCchhhhh-------------hhhcCCceeccccc----cch---hhhHHhHhhhheeeEEeecCC-----
Q 044266 345 PSIACFLSHCGWNSTME-------------GVSNGVPFLCWPYF----ADQ---FLNESYICDIWKVGLRFNKNK----- 399 (462)
Q Consensus 345 ~~~~~~I~HgG~~sv~e-------------al~~GvP~l~~P~~----~DQ---~~na~~v~~~~g~g~~~~~~~----- 399 (462)
+|+ .+|.=+=+||+.. ++..++|++++|-. ... ..|-.++.+ +|+=+.-+..+
T Consensus 82 aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~~g~~f~l 159 (194)
T 1p3y_1 82 ADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIVIEPVEIMAFEI 159 (194)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEECCCBCCC----
T ss_pred CCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEEECCCCCccccc
Confidence 332 2555555454332 25678999999952 333 557888888 58744333211
Q ss_pred --------CCccCHHHHHHHHHHHhcC
Q 044266 400 --------NGIITREEIMKKVDQVLED 418 (462)
Q Consensus 400 --------~~~~~~~~l~~~i~~ll~~ 418 (462)
.+-.+.++|.+.+.+.+.+
T Consensus 160 acg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 160 ATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp --------CBCCCHHHHHHHHHHHCC-
T ss_pred ccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 1235789999988888853
No 213
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=43.20 E-value=13 Score=33.15 Aligned_cols=34 Identities=9% Similarity=0.022 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++||.++-.|..|. .+|+.|+++||+|+++....
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCCH
Confidence 56899998777774 67899999999999986544
No 214
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=43.18 E-value=1.3e+02 Score=24.18 Aligned_cols=143 Identities=17% Similarity=0.168 Sum_probs=78.7
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACF 350 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~ 350 (462)
+.|-|-.||.+ +....++....++..|.++-+.+.+. .-.|+...+. +-. .....++.+
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR~p~~~~~~----------~~~---a~~~g~~Vi 71 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA------HRTPDRLFSF----------AEQ---AEANGLHVI 71 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------HHH---TTTTTCSEE
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHHH----------HHH---HHhCCCcEE
Confidence 45666677644 66778888888888888875555432 2233332211 000 001112237
Q ss_pred eeccCch----hhhhhhhcCCceeccccccchh---h--hH-HhHhhhhee--eEEeecCCCCccCHHHHHHHHHHHhcC
Q 044266 351 LSHCGWN----STMEGVSNGVPFLCWPYFADQF---L--NE-SYICDIWKV--GLRFNKNKNGIITREEIMKKVDQVLED 418 (462)
Q Consensus 351 I~HgG~~----sv~eal~~GvP~l~~P~~~DQ~---~--na-~~v~~~~g~--g~~~~~~~~~~~~~~~l~~~i~~ll~~ 418 (462)
|.=+|.. ++..++ .-+|+|.+|...-.. + .+ -++- . |+ +... .++.+.+++.-++..|..+ .|
T Consensus 72 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP-~-GvPVatV~-I~~a~~~nAa~lAa~ILa~-~d 146 (174)
T 3kuu_A 72 IAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMP-R-GIPVGTLA-IGKAGAANAALLAAQILAL-HD 146 (174)
T ss_dssp EEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCC-T-TSCCEECC-SSHHHHHHHHHHHHHHHHT-TC
T ss_pred EEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCC-C-CCeeEEEE-eCCccchHHHHHHHHHHcC-CC
Confidence 7766644 333333 358999999743211 1 11 1111 1 54 3222 1100235566777666554 58
Q ss_pred HHHHHHHHHHHHHHHhHhhcC
Q 044266 419 ENFKARALDLKETSLNSVREG 439 (462)
Q Consensus 419 ~~~~~~a~~l~~~~~~~~~~~ 439 (462)
++++++.+..++++++.+.+.
T Consensus 147 ~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 147 TELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999998865543
No 215
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=43.06 E-value=11 Score=34.90 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 16 ~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred CeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 389999887777 45788999999999998764
No 216
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=43.02 E-value=25 Score=23.40 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHH
Q 044266 404 TREEIMKKVDQVLEDENFKARALDLKETSLNSVREGGQSDKTFKNFVQWIK 454 (462)
Q Consensus 404 ~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 454 (462)
.++++.+.-.+.|.|++++..-..=+..|-.. .|-+..+|++.++...
T Consensus 13 ~Re~li~~Av~FLqdp~V~~sp~~~K~~FL~s---KGLt~eEI~~Al~ra~ 60 (70)
T 2w84_A 13 PREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDMAFQQSG 60 (70)
T ss_dssp CCHHHHHHHHHHHCSTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhCChhhhhCCHHHHHHHHHH---cCCCHHHHHHHHHHcc
Confidence 34445444457888999988888888888876 8999999999988743
No 217
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=43.00 E-value=17 Score=33.76 Aligned_cols=30 Identities=33% Similarity=0.355 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEE
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFL 38 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 38 (462)
.+||+++-.|--| +.+|..|+++||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 3689988766555 78899999999999998
No 218
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=42.69 E-value=96 Score=27.88 Aligned_cols=39 Identities=13% Similarity=0.050 Sum_probs=31.8
Q ss_pred CEEEEE-cCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 5 PHVLAF-PYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 5 ~~Il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.+|+++ .-|+.|-..-...||..|+++|++|.++..+..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 345544 455679999999999999999999999998765
No 219
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=42.54 E-value=57 Score=29.84 Aligned_cols=27 Identities=26% Similarity=0.471 Sum_probs=21.1
Q ss_pred CCCcccceeccCchhh---hhhhhcCCceecc
Q 044266 344 HPSIACFLSHCGWNST---MEGVSNGVPFLCW 372 (462)
Q Consensus 344 ~~~~~~~I~HgG~~sv---~eal~~GvP~l~~ 372 (462)
.||+ +|++||+-++ +.|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 5666 9999998765 5567789999863
No 220
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=42.51 E-value=24 Score=22.21 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHH
Q 044266 404 TREEIMKKVDQVLEDENFKARALDLKETSLNSVREGGQSDKTFKNFVQ 451 (462)
Q Consensus 404 ~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 451 (462)
..+++.+.=.+.|.||+++..-..-+..|-.+ .|-+..+|++.++
T Consensus 8 ~Re~li~~Av~FL~dp~V~~sp~~~K~~FL~s---KGLt~~EI~~Al~ 52 (54)
T 3ff5_A 8 FREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDLAFQ 52 (54)
T ss_dssp HHHHHHHHHHHHHHCTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCChhhhcCCHHHHHHHHHH---cCCCHHHHHHHHH
Confidence 34444444447788999988888888888876 8999999998875
No 221
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=42.26 E-value=41 Score=25.09 Aligned_cols=45 Identities=9% Similarity=-0.049 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCCccCh--HHHHHHHHHHHhCC--CEEEEEeCCcchH
Q 044266 1 MLRRPHVLAFPYPAQGHV--IPLLEISQCLVKHG--VKVTFLNTDYNHK 45 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~--~p~l~La~~L~~rG--h~Vt~~~~~~~~~ 45 (462)
|...+|++|+-+...-.. +-.+.+|....++| |+|.++....-..
T Consensus 4 ~~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 4 MSANDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SSTTSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred cccCCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 444578887665543222 33677888888999 8999999887666
No 222
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=41.77 E-value=19 Score=31.96 Aligned_cols=38 Identities=18% Similarity=0.147 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|..+++|+++ |+.|.+- ..+++.|.++||+|+.++-..
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 5445577664 4455553 467889999999999988653
No 223
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=41.72 E-value=51 Score=32.08 Aligned_cols=99 Identities=13% Similarity=0.162 Sum_probs=57.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcC--CCCCCCC----CCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIP--DGMEPEG----DRN 77 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~--~~~~~~~----~~~ 77 (462)
+.++++.-. +-.-++.+|+.|.+.|+++. ++......+++. |+.+..+. .++|+-- .+-
T Consensus 5 ~G~aLISV~----DK~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~---------GI~v~~V~k~TgfPE~l~GRVKTL 69 (593)
T 1g8m_A 5 QQLALLSVS----EKAGLVEFARSLNALGLGLI--ASGGTATALRDA---------GLPVRDVSDLTGFPEMLGGRVKTL 69 (593)
T ss_dssp CCEEEEEES----CCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEEHHHHHSCCCBGGGTBSSC
T ss_pred CCEEEEEEe----CcHhHHHHHHHHHHCCCEEE--EchHHHHHHHHC---------CCeEEEeecccCCchhhcCCcccc
Confidence 445555432 25568899999999998764 777888899888 78777765 2444321 223
Q ss_pred CHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcchHH
Q 044266 78 DLGMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMGWVM 122 (462)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~ 122 (462)
.+.-.-..+.+.......++ +...- ...|+||++ ++++--
T Consensus 70 HP~ihgGiLar~~~~h~~~l-~~~~I---~~iDlVvvN-LYPF~~ 109 (593)
T 1g8m_A 70 HPAVHAGILARNIPEDNADM-NKQDF---SLVRVVVCN-LYPFVK 109 (593)
T ss_dssp SHHHHHHHHCCSSHHHHHHH-HHTTC---CCEEEEEEE-CCCHHH
T ss_pred CchhhhhhccCCCHHHHHHH-HHcCC---CceeEEEEe-ccCHHH
Confidence 33322222222222233333 33222 678999999 555433
No 224
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=41.63 E-value=41 Score=33.13 Aligned_cols=44 Identities=9% Similarity=0.013 Sum_probs=38.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRV 47 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v 47 (462)
+.+|++.+.++-.|-....-++..|..+|++|..++.....+.+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 56999999999999999999999999999999999877654444
No 225
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=41.52 E-value=17 Score=32.55 Aligned_cols=41 Identities=12% Similarity=0.202 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC-----C-CEEEEEeCCcchHHHHH
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKH-----G-VKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~~~~~~~v~~ 49 (462)
++||.++-.|..|. .+|..|+++ | |+|+++..+...+.+.+
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 36999998877774 557888888 9 99999976333344444
No 226
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=41.44 E-value=37 Score=24.87 Aligned_cols=42 Identities=5% Similarity=0.000 Sum_probs=29.1
Q ss_pred EEE-EEcCCCc--cChHHHHHHHHHHHhC-CC-EEEEEeCCcchHHH
Q 044266 6 HVL-AFPYPAQ--GHVIPLLEISQCLVKH-GV-KVTFLNTDYNHKRV 47 (462)
Q Consensus 6 ~Il-~~~~~~~--GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~~~~v 47 (462)
|++ +++.+.+ ......+.+|..+.+. || +|+++-...-....
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 555 4444434 4456678999999988 99 99999887554443
No 227
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=41.39 E-value=1.4e+02 Score=26.06 Aligned_cols=83 Identities=5% Similarity=-0.139 Sum_probs=48.7
Q ss_pred ccceeccCchhhhhhhh-----c---CCceeccccccchhhhHH-----hHhhhhe-eeEEeecCCCCccCHHHHHHHHH
Q 044266 348 ACFLSHCGWNSTMEGVS-----N---GVPFLCWPYFADQFLNES-----YICDIWK-VGLRFNKNKNGIITREEIMKKVD 413 (462)
Q Consensus 348 ~~~I~HgG~~sv~eal~-----~---GvP~l~~P~~~DQ~~na~-----~v~~~~g-~g~~~~~~~~~~~~~~~l~~~i~ 413 (462)
+++|.--|...+.+.++ . |+|+-++ |.+.++. .+.+. + +-+.+...+....-+..|++.|.
T Consensus 108 dlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g-~~l~IaIST~Gksp~lA~~ir~~ie 182 (274)
T 1kyq_A 108 YIIMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIG-DRLQILISTNGLSPRFGALVRDEIR 182 (274)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEET-TTEEEEEEESSSCHHHHHHHHHHHH
T ss_pred EEEEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeC-CCEEEEEECCCCCcHHHHHHHHHHH
Confidence 34888877664544443 3 6666333 3333333 33332 3 33444333334556688999999
Q ss_pred HHh---cCH---HHHHHHHHHHHHHHhH
Q 044266 414 QVL---EDE---NFKARALDLKETSLNS 435 (462)
Q Consensus 414 ~ll---~~~---~~~~~a~~l~~~~~~~ 435 (462)
..| .++ .+.+.+.++++++++.
T Consensus 183 ~~l~~~p~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 183 NLFTQMGDLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHhh
Confidence 999 532 6777778888888765
No 228
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=41.28 E-value=38 Score=25.42 Aligned_cols=33 Identities=6% Similarity=-0.001 Sum_probs=22.8
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-------CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-------KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+++.+ ++|++.++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 8999999997665 455554433 57888776544
No 229
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=41.18 E-value=53 Score=28.09 Aligned_cols=39 Identities=21% Similarity=0.163 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQ-----------GHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~-----------GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.|||++..... -...=+....+.|.++|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 458988775422 244567777888999999999999754
No 230
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=41.10 E-value=73 Score=24.29 Aligned_cols=59 Identities=7% Similarity=-0.031 Sum_probs=36.2
Q ss_pred hcCCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcCHHHHHHHHHH
Q 044266 364 SNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLEDENFKARALDL 428 (462)
Q Consensus 364 ~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l 428 (462)
...+|+|++--..+.. ......+ .|+--.+. +.++.++|.++|++++.....+...+.+
T Consensus 73 ~~~~pii~ls~~~~~~-~~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~ 131 (155)
T 1qkk_A 73 DPDLPMILVTGHGDIP-MAVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSL 131 (155)
T ss_dssp CTTSCEEEEECGGGHH-HHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChH-HHHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478888875544433 3333333 36655553 5689999999999998655444333333
No 231
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=41.06 E-value=22 Score=27.54 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=29.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.+++++..|. =+.|++.+++.|.++|.+|+++ ....
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4788877544 4899999999999999999998 5543
No 232
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=41.02 E-value=2e+02 Score=26.93 Aligned_cols=138 Identities=12% Similarity=0.074 Sum_probs=76.7
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCC-Ccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHP-SIA 348 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~-~~~ 348 (462)
.+.|-|-+||.+ +....++....++..|.++-+.+.+. .-.|+...+. +-+..- ... +|
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~~~----------~~~~~~-~g~~~v- 324 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETLRI----------KAEYEG-DGIPTV- 324 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------HHHHHT-TCCCEE-
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHHHH----------HHHHHH-CCCCeE-
Confidence 457778788754 66777888888888888865554432 2233332111 000000 011 24
Q ss_pred cceeccCch----hhhhhhhcCCceecccccc-chh---hhHHhHh-hhheeeEEeecCCCCccCHHHHHHHHHHHhcCH
Q 044266 349 CFLSHCGWN----STMEGVSNGVPFLCWPYFA-DQF---LNESYIC-DIWKVGLRFNKNKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 349 ~~I~HgG~~----sv~eal~~GvP~l~~P~~~-DQ~---~na~~v~-~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
+|.-+|.. ++..++ .-+|+|.+|... .+- .++ .+. -. |+.+..- ....++.-++..|. .+.|+
T Consensus 325 -iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls-~vqmp~-g~pvatv---~~~~nAa~~A~~Il-~~~~~ 396 (425)
T 2h31_A 325 -FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWS-SLRLPS-GLGCSTV---LSPEGSAQFAAQIF-GLSNH 396 (425)
T ss_dssp -EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGG-TSSCCS-SCCCEEC---CCHHHHHHHHHHHH-HTTCH
T ss_pred -EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHH-HhcCCC-CCceEEe---cCchHHHHHHHHHH-ccCCH
Confidence 66665543 444444 478999999742 111 111 111 01 4442221 13457777777776 55689
Q ss_pred HHHHHHHHHHHHHHhH
Q 044266 420 NFKARALDLKETSLNS 435 (462)
Q Consensus 420 ~~~~~a~~l~~~~~~~ 435 (462)
+++++.+..++.....
T Consensus 397 ~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 397 LVWSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999988888887764
No 233
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=40.41 E-value=31 Score=30.81 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.||.|+-.+..|. ++|+.|.++||+|++..-.
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 45899999999884 6899999999999998643
No 234
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=40.28 E-value=24 Score=36.13 Aligned_cols=114 Identities=7% Similarity=0.031 Sum_probs=73.9
Q ss_pred cccCcccccCCCCcccceeccCchhhhhhhhcCCceeccccccchhhhHHhHhhhheeeEEeecC--CCCccCHHHHHHH
Q 044266 334 GWAPQQKVLTHPSIACFLSHCGWNSTMEGVSNGVPFLCWPYFADQFLNESYICDIWKVGLRFNKN--KNGIITREEIMKK 411 (462)
Q Consensus 334 ~~~pq~~ll~~~~~~~~I~HgG~~sv~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~--~~~~~~~~~l~~~ 411 (462)
++.+-.++|..+|+ +||= =...+.|.+..++|+|....-.|+...- .+ |.=...... +.-..+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHHHH
Confidence 44455678888777 9986 3567789999999999987766665431 11 221111000 0123588999999
Q ss_pred HHHHhcC-HHHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHHhh
Q 044266 412 VDQVLED-ENFKARALDLKETSLNSVREGGQSDKTFKNFVQWIKAE 456 (462)
Q Consensus 412 i~~ll~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 456 (462)
|.....+ ..++++.+.+.+++-.. .+|.++.+.++.+++.....
T Consensus 677 i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~ 721 (729)
T 3l7i_A 677 LKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQ 721 (729)
T ss_dssp HTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHH
T ss_pred HhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCc
Confidence 9988763 47888888888888765 33445566666666665543
No 235
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=40.07 E-value=22 Score=32.21 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc-chHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY-NHKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~-~~~~v~~~ 50 (462)
.+||.|+-.|..| ..+|..|++.||+|+++.... ..+.+.+.
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~~~~~~~l~~~ 56 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARRKEIVDLINVS 56 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCHHHHHHHHHh
Confidence 4699999888777 478899999999999987643 23444444
No 236
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=39.94 E-value=17 Score=27.82 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.||+++.. |.+ -..+|+.|.++||+|+++....
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 457777654 433 4578999999999999987654
No 237
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=39.76 E-value=30 Score=30.98 Aligned_cols=35 Identities=29% Similarity=0.249 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+++||.|+-.|..| ..+|+.|+++||+|++.....
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCCH
Confidence 45799998776666 567899999999999886543
No 238
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=39.63 E-value=20 Score=30.57 Aligned_cols=38 Identities=8% Similarity=-0.029 Sum_probs=32.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|||++..-|+-|=..-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 37888767777889999999999999999999997765
No 239
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=39.58 E-value=1.5e+02 Score=25.53 Aligned_cols=35 Identities=11% Similarity=0.021 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+-|+++++.++.| ==.++|+.|++.|.+|.++...
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 3478899977775 3467899999999999887654
No 240
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=39.53 E-value=33 Score=32.46 Aligned_cols=41 Identities=17% Similarity=0.271 Sum_probs=33.1
Q ss_pred CEE-EEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 044266 5 PHV-LAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHK 45 (462)
Q Consensus 5 ~~I-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 45 (462)
.+| +++..++.|-..-+..||..|+.+|++|.++..+.+..
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r~ 138 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRP 138 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSCH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccch
Confidence 344 45556677999999999999999999999999776543
No 241
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=39.10 E-value=37 Score=29.45 Aligned_cols=113 Identities=13% Similarity=0.039 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHH
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGML 82 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 82 (462)
+++|||+.---+. |---+..|++.|.+ +|+|+++.+...+...-.. ......+++..+.++. -.....+...
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~s----iTl~~pl~~~~~~~~~--~~v~GTPaDC 81 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNS----LTLNAPLHIKNLENGM--ISVEGTPTDC 81 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTC----CCCSSCEEEEECTTSC--EEESSCHHHH
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccc----eecCCCeEEEEecCCe--EEECCCHHHH
Confidence 4588888654333 34447788888876 8999999998876544322 1122246666544321 0011122222
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCC----------CcchHHHH---HHHcCCceEEEcc
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADG----------SMGWVMEV---AEKMKLRRAAFWP 137 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~----------~~~~~~~~---A~~lgiP~v~~~~ 137 (462)
...-+. .+-. .+||+||+-. ++..++.+ |..+|||.+.|+.
T Consensus 82 V~lal~-----------~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 82 VHLAIT-----------GVLP---EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp HHHHTT-----------TTSS---SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred HHHHHH-----------HhcC---CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 222111 1112 6899999742 22223222 4556899999865
No 242
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=39.08 E-value=43 Score=24.34 Aligned_cols=33 Identities=9% Similarity=-0.029 Sum_probs=22.7
Q ss_pred CCceEEEeCCCcc--hHHHHHHH----cCCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEK----MKLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~----lgiP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+.+. .++|.+.++...
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 8999999997665 34444433 468888776544
No 243
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=38.61 E-value=1e+02 Score=27.74 Aligned_cols=110 Identities=21% Similarity=0.200 Sum_probs=60.2
Q ss_pred EEEEEcCCCccChHH----HHHHHHHHHhCC-CEEEEEeCCcchHHHHHhhcCCCCCCCCe-EEEEcCCCCCCCCCCCCH
Q 044266 6 HVLAFPYPAQGHVIP----LLEISQCLVKHG-VKVTFLNTDYNHKRVVNALGQNNYIGDQI-KLVSIPDGMEPEGDRNDL 79 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p----~l~La~~L~~rG-h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~ 79 (462)
.|+++.-...|.++| ++..|++|++.| .+|+.++.....+.+++..... |. +.+.+.+..- .. +.
T Consensus 2 ~ilv~~e~~~g~l~~~~~eal~~A~~L~e~g~~~V~av~~G~~~~~~~~~a~a~-----GaDkv~~v~d~~l-~~---~~ 72 (320)
T 1o97_D 2 KILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSVN-----GVDELVVVKGSSI-DF---DP 72 (320)
T ss_dssp EEEEECCEETTEECTHHHHHHHHHHHHCSSTTCEEEEEEESTTGGGGHHHHCBT-----TCSEEEEEECSCS-SC---CH
T ss_pred eEEEEEeCcCCCcCHHHHHHHHHHHHHhhCCCCcEEEEEECCcHHHHHHHHHhc-----CCceEEEEeCccc-CC---CH
Confidence 355555555555543 667788886646 5888777554433233311111 32 2222222100 10 11
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCcc---hHHHHHHHcCCceEEEccc
Q 044266 80 GMLTKTMVRVMPEKLEELIENINRLENEKITCVVADGSMG---WVMEVAEKMKLRRAAFWPA 138 (462)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~---~~~~~A~~lgiP~v~~~~~ 138 (462)
......+.++++. .+||+||+-.... .+..+|.++++|.+...+.
T Consensus 73 --------~~~a~~La~~i~~------~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~ 120 (320)
T 1o97_D 73 --------DVFEASVSALIAA------HNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYI 120 (320)
T ss_dssp --------HHHHHHHHHHHHH------HCCSEEEEECSHHHHTTHHHHHHTSSCEEEEEECE
T ss_pred --------HHHHHHHHHHHHh------cCCCEEEEeCCCchhhHHHHHHHHhCCCccccEEE
Confidence 1122334455555 6899999887554 5778999999999987653
No 244
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=38.39 E-value=32 Score=31.18 Aligned_cols=73 Identities=10% Similarity=0.103 Sum_probs=47.2
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhh
Q 044266 283 FDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEG 362 (462)
Q Consensus 283 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~ea 362 (462)
.+.+..+.+.+++.....+.||...++- +..++.++++...+-++|+. ||-..-...++-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY-----------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 3555677788888888888888877661 12334455555555556666 7777777777777
Q ss_pred hh--cCCceecccc
Q 044266 363 VS--NGVPFLCWPY 374 (462)
Q Consensus 363 l~--~GvP~l~~P~ 374 (462)
++ .|++.+-=|.
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 66 4666655554
No 245
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=38.38 E-value=24 Score=31.28 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=24.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|..+++|+++ |+.|.+- ..+++.|.++||+|+.++-.
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 5445567664 4444443 46789999999999988765
No 246
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=38.32 E-value=24 Score=30.13 Aligned_cols=22 Identities=23% Similarity=0.285 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCEEEEEeCCc
Q 044266 21 LLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 21 ~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
-.++|++|+++|++|++++.+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 4678999999999999999864
No 247
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=38.29 E-value=32 Score=26.14 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=22.8
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc---------CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM---------KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l---------giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+++.+ .+|++.++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 8999999997655 455555544 27888776543
No 248
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=38.23 E-value=11 Score=33.17 Aligned_cols=52 Identities=12% Similarity=-0.028 Sum_probs=35.4
Q ss_pred cccceeccCchhhhhhhhc------CCceeccccccchhhhHHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcC
Q 044266 347 IACFLSHCGWNSTMEGVSN------GVPFLCWPYFADQFLNESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLED 418 (462)
Q Consensus 347 ~~~~I~HgG~~sv~eal~~------GvP~l~~P~~~DQ~~na~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~ 418 (462)
++++|.=||-||+++++.. ++|++.+|... +|.- ..+.++++.++++++++.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lgfl--------~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LGFY--------ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CCcC--------CcCCHHHHHHHHHHHHcC
Confidence 3449999999999998764 88998886510 1211 123566777777777753
No 249
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=38.14 E-value=38 Score=30.41 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
++||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 4689999888777 56889999999999988654
No 250
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=37.82 E-value=34 Score=29.85 Aligned_cols=34 Identities=26% Similarity=0.261 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+++|++. |+ |. --..|++.|.++||+|+.++-..
T Consensus 3 ~~~ilVt--Ga-G~--iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIA--GC-GD--LGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEE--CC-SH--HHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEE--CC-CH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 4577765 34 63 34578999999999999997643
No 251
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=37.64 E-value=52 Score=29.00 Aligned_cols=44 Identities=27% Similarity=0.414 Sum_probs=33.8
Q ss_pred cHHHHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHcCCceEEEcc
Q 044266 91 PEKLEELIENINRLENEKITCVVADGSMG--WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 91 ~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~~ 137 (462)
...+.++++.+++ .+..+|+++.... .+-.+|+..|++++.+.+
T Consensus 209 ~~~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~ld~ 254 (284)
T 2prs_A 209 AQRLHEIRTQLVE---QKATCVFAEPQFRPAVVESVARGTSVRMGTLDP 254 (284)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEECTTSCSHHHHHHTTTSCCEEEECCT
T ss_pred HHHHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHcCCeEEEecc
Confidence 3446666677776 8999999998765 577889999999987543
No 252
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=37.59 E-value=45 Score=28.05 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=28.4
Q ss_pred eeecccCcc-c-ccCCCCcccceeccCchhhhhhhh---------cCCceecccc
Q 044266 331 QMVGWAPQQ-K-VLTHPSIACFLSHCGWNSTMEGVS---------NGVPFLCWPY 374 (462)
Q Consensus 331 ~~~~~~pq~-~-ll~~~~~~~~I~HgG~~sv~eal~---------~GvP~l~~P~ 374 (462)
.+...++++ . +...++. .++--||.||+-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda-~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCE-EEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 345556654 2 3344443 5777899999987762 4899998864
No 253
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=37.48 E-value=34 Score=30.10 Aligned_cols=39 Identities=18% Similarity=0.294 Sum_probs=31.0
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPY--PAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++|++.+.. |+.|=..-...||..|+++|++|.++=.+.
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456665543 566888999999999999999999987665
No 254
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=37.45 E-value=1.6e+02 Score=23.61 Aligned_cols=145 Identities=12% Similarity=0.108 Sum_probs=77.5
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcc
Q 044266 269 QNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIA 348 (462)
Q Consensus 269 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~ 348 (462)
+.|.|-|-+||.+ +....++....++..|.++-..+.+. .-.|+.+.+. +-.. ..-.++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~~~----------~~~a---~~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMFDY----------AEKA---RERGLR 69 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHHH---TTTTCS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHHHH----------HHHH---HhcCCe
Confidence 3567888888755 66778888888888888765554432 2233332211 1000 001122
Q ss_pred cceeccCch----hhhhhhhcCCceeccccccc---hhh--hH-HhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhcC
Q 044266 349 CFLSHCGWN----STMEGVSNGVPFLCWPYFAD---QFL--NE-SYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLED 418 (462)
Q Consensus 349 ~~I~HgG~~----sv~eal~~GvP~l~~P~~~D---Q~~--na-~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~~ 418 (462)
.+|.-.|.- ++..+ ..-+|+|.+|.... -.+ .+ -++=....+|...-. +.+..++.-++..|- .+.|
T Consensus 70 ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~-~~~a~NAallA~~IL-a~~d 146 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIG-EAGAANAALFAVSIL-SGNS 146 (173)
T ss_dssp EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSS-HHHHHHHHHHHHHHH-TTSC
T ss_pred EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecC-CcchHHHHHHHHHHH-cCCC
Confidence 266555533 44444 34789999996432 111 11 111110122322210 012345555666664 4568
Q ss_pred HHHHHHHHHHHHHHHhHhh
Q 044266 419 ENFKARALDLKETSLNSVR 437 (462)
Q Consensus 419 ~~~~~~a~~l~~~~~~~~~ 437 (462)
++++++.+..+++.++...
T Consensus 147 ~~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 147 VDYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988887543
No 255
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=37.42 E-value=34 Score=30.79 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=24.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|..+++|++ + |+.|.+= ..|++.|+++||+|+.+.-.
T Consensus 2 M~~~~~vlV-T-GatG~iG--~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 2 MSTKGTILV-T-GGAGYIG--SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CCSSCEEEE-E-TTTSHHH--HHHHHHHHHTTCEEEEECCC
T ss_pred CCCCcEEEE-e-cCCcHHH--HHHHHHHHHCCCcEEEEecC
Confidence 444556655 3 3444332 57899999999999998643
No 256
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=37.06 E-value=44 Score=28.09 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=24.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|..+.|.++++.++ |-+ -.++++.|+++||+|+++...
T Consensus 1 M~~~~k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLITGAS-RGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEECC
Confidence 44344556666444 333 367899999999999988764
No 257
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=36.59 E-value=58 Score=28.96 Aligned_cols=27 Identities=11% Similarity=0.031 Sum_probs=23.0
Q ss_pred ccceeccCchhhhhhhh------cCCceecccc
Q 044266 348 ACFLSHCGWNSTMEGVS------NGVPFLCWPY 374 (462)
Q Consensus 348 ~~~I~HgG~~sv~eal~------~GvP~l~~P~ 374 (462)
+.+|.-||-||+.|++. .++|+.++|.
T Consensus 65 d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 65 DLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CEEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 34999999999999864 5789999997
No 258
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=36.51 E-value=1.1e+02 Score=24.64 Aligned_cols=114 Identities=9% Similarity=0.014 Sum_probs=61.2
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccC-chhHHHHhcCCceee---cccCcccccCCC
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAY-PEGFQDRVATRRQMV---GWAPQQKVLTHP 345 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~---~~~pq~~ll~~~ 345 (462)
+.+++.-.|+..... ...+++.|.+.|+++-++..... ..-+ ++.+. ...+.++.. .|+++-.+-..+
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A----~~fi~~~~l~-~l~~~v~~~~~~~~~~hi~l~~~a 77 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNG----RKFINGEILK-QFCDNYYDEFEDPFLNHVDIANKH 77 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGG----GGGSCHHHHH-HHCSCEECTTTCTTCCHHHHHHTC
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCH----HHHhhHHHHH-HhcCCEEecCCCCccccccccchh
Confidence 346666677765443 34567777777888766665441 1112 22222 233322211 234444443334
Q ss_pred CcccceeccCchhhh-------------hhhhcCCceeccccc----cc---hhhhHHhHhhhheeeE
Q 044266 346 SIACFLSHCGWNSTM-------------EGVSNGVPFLCWPYF----AD---QFLNESYICDIWKVGL 393 (462)
Q Consensus 346 ~~~~~I~HgG~~sv~-------------eal~~GvP~l~~P~~----~D---Q~~na~~v~~~~g~g~ 393 (462)
|+ .+|.-+=+||+. -++..++|++++|-. .+ ...|-.++.+ +|+=+
T Consensus 78 D~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 78 DK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp SE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred CE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 43 355555555433 346779999999942 22 2457788887 57644
No 259
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=36.49 E-value=26 Score=29.97 Aligned_cols=34 Identities=24% Similarity=0.165 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.++||.++..|..|- .||+.|+++||+|+.+..+
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 457999999988874 5889999999999987764
No 260
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=36.22 E-value=2.1e+02 Score=24.63 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 467777766553 2357899999999999988844
No 261
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=35.90 E-value=2.2e+02 Score=26.71 Aligned_cols=40 Identities=8% Similarity=0.104 Sum_probs=32.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHK 45 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 45 (462)
.|+++..++.|-..-+..||..|+.+|+.|.++..+....
T Consensus 100 vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r~ 139 (425)
T 2ffh_A 100 LWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRP 139 (425)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSCH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccCc
Confidence 3456666677999999999999999999999999876543
No 262
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.88 E-value=37 Score=26.00 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
+.||+++..+..| ..+|+.|.++||+|+++.....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHH
Confidence 3578887655444 4788999999999999987653
No 263
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=35.72 E-value=21 Score=32.46 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|++..+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 1 M~~~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp --CCEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 5556788888776655 77888999999999999765
No 264
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=35.71 E-value=74 Score=23.06 Aligned_cols=30 Identities=17% Similarity=0.103 Sum_probs=21.1
Q ss_pred cCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhH
Q 044266 403 ITREEIMKKVDQVLEDENFKARALDLKETSLNS 435 (462)
Q Consensus 403 ~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~ 435 (462)
++++++.+....+ ..++++++.|.+.+.++
T Consensus 3 ~~~eq~~k~~~el---~~v~~n~~lL~EML~~~ 32 (103)
T 1wrd_A 3 LGSEQIGKLRSEL---EMVSGNVRVMSEMLTEL 32 (103)
T ss_dssp SSSTTHHHHHHHH---HHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHH---HHHHHHHHHHHHHHHhc
Confidence 5666676666655 35788888888888765
No 265
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=35.52 E-value=31 Score=30.61 Aligned_cols=34 Identities=12% Similarity=0.161 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+++||.|+-.|..|. .+|+.|+++||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 356999998877774 6788999999999988654
No 266
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=35.45 E-value=64 Score=28.38 Aligned_cols=39 Identities=5% Similarity=0.009 Sum_probs=27.5
Q ss_pred CCEEEEEcCCCcc-ChH---HHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQG-HVI---PLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~G-H~~---p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++||+++..+... |-. ....++++|.++||+|.++....
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 4689888754322 222 34578999999999999988763
No 267
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=35.39 E-value=1.2e+02 Score=28.45 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
+.|||++. .|. -.+.+++++.+.|++|.++.+...
T Consensus 6 ~~kiLI~g---~g~--~a~~i~~aa~~~G~~~v~v~~~~~ 40 (446)
T 3ouz_A 6 IKSILIAN---RGE--IALRALRTIKEMGKKAICVYSEAD 40 (446)
T ss_dssp CCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred cceEEEEC---CCH--HHHHHHHHHHHcCCEEEEEEcCcc
Confidence 34787743 232 457899999999999998875543
No 268
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=35.24 E-value=36 Score=30.30 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLN 39 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 39 (462)
.||.|+-.+..|. ++|+.|+++||+|++..
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 3899999988884 68999999999999865
No 269
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=35.21 E-value=40 Score=29.34 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCC---ccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 3 RRPHVLAFPYPA---QGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 3 ~~~~Il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.++|.+|++.+- .|-=...-.|+..|..||+.||..=-+++
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 467999999773 45567788999999999999999887664
No 270
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=34.99 E-value=16 Score=30.88 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=25.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
+++||.++-.|..| ..+|+.|++.||+|+++..
T Consensus 22 ~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 22 SMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred cCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 35689988766555 4678899999999998544
No 271
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=34.98 E-value=2.1e+02 Score=25.82 Aligned_cols=35 Identities=11% Similarity=0.053 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 45 gk~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 45 GCTVFITGASRG---IGKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 367788866653 23578999999999999987554
No 272
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=34.80 E-value=74 Score=22.95 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=28.5
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPD 309 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 309 (462)
.||+.|.| +++.++++...+.+.|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777765 89999999999999999999888654
No 273
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=34.76 E-value=30 Score=30.28 Aligned_cols=32 Identities=19% Similarity=0.062 Sum_probs=25.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
||.++-.|..|. .+|..|+++||+|+++....
T Consensus 2 ~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQ-----LWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHH-----HHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcCc
Confidence 788887766663 67889999999999986543
No 274
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=34.72 E-value=1.4e+02 Score=25.66 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+-|+++++.++.| ==.++|+.|++.|.+|.+..-.
T Consensus 8 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~~ 42 (255)
T 4g81_D 8 TGKTALVTGSARG---LGFAYAEGLAAAGARVILNDIR 42 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 3589999987775 3467899999999999876543
No 275
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=34.60 E-value=36 Score=28.17 Aligned_cols=33 Identities=18% Similarity=0.106 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
||++. |+.|.+= ..|++.|+++||+|+.++-..
T Consensus 2 kvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 66653 4444443 578999999999999998654
No 276
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=34.57 E-value=10 Score=19.03 Aligned_cols=17 Identities=24% Similarity=0.538 Sum_probs=14.2
Q ss_pred CchhhhhhhhcCCceec
Q 044266 355 GWNSTMEGVSNGVPFLC 371 (462)
Q Consensus 355 G~~sv~eal~~GvP~l~ 371 (462)
|.|+++..+..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888999999998765
No 277
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=34.46 E-value=1.1e+02 Score=28.70 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=24.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
||+++. .| .....+++++.+.|++|+++.+..
T Consensus 3 ~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~~ 34 (451)
T 2vpq_A 3 KVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSEG 34 (451)
T ss_dssp EEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred eEEEeC---CC--HHHHHHHHHHHHcCCEEEEEeccc
Confidence 677754 23 246688999999999999987644
No 278
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=34.43 E-value=1.7e+02 Score=24.51 Aligned_cols=95 Identities=9% Similarity=0.152 Sum_probs=52.7
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHH
Q 044266 21 LLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIEN 100 (462)
Q Consensus 21 ~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (462)
...+.+.|.++|..+.+++.......+.+... ....+.++...+..... +.-...+...++.
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~g----l~~~fd~i~~~~~~~~~--------------KP~p~~~~~a~~~ 161 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAALE----LREFFTFCADASQLKNS--------------KPDPEIFLAACAG 161 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHTT----CGGGCSEECCGGGCSSC--------------TTSTHHHHHHHHH
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhhh----hccccccccccccccCC--------------CCcHHHHHHHHHH
Confidence 45677888899999998887665554433310 00112222222221111 1111223333444
Q ss_pred HhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 101 INRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 101 l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
+.- .+-++|+++.. ......|+..|+.+|.+.+
T Consensus 162 lg~---~p~e~l~VgDs-~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 162 LGV---PPQACIGIEDA-QAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp HTS---CGGGEEEEESS-HHHHHHHHHHTCEEEEEST
T ss_pred cCC---ChHHEEEEcCC-HHHHHHHHHcCCEEEEECC
Confidence 433 44466666644 5788999999999998754
No 279
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=34.40 E-value=53 Score=26.76 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCccChHHHHH-HHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLE-ISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 42 (462)
++||+++-....|+..-+.. +++.|.+.|++|.++.-..
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 45888777666787766554 5667777899998886543
No 280
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=34.10 E-value=44 Score=26.58 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=28.7
Q ss_pred CEEEEEcCCCcc-----ChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQG-----HVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~G-----H~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+|+++| +|| -.++..+|++.|.++|.+|.|..+|-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677766 444 34589999999999999999999874
No 281
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=34.08 E-value=14 Score=33.13 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=23.3
Q ss_pred ccCCCCcccceeccCchhhhhhhhc----CCceecccc
Q 044266 341 VLTHPSIACFLSHCGWNSTMEGVSN----GVPFLCWPY 374 (462)
Q Consensus 341 ll~~~~~~~~I~HgG~~sv~eal~~----GvP~l~~P~ 374 (462)
....+++ +|.-||-||+++++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3334455 9999999999999854 889988863
No 282
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.06 E-value=1.4e+02 Score=25.75 Aligned_cols=33 Identities=15% Similarity=0.073 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 15 gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 467788866553 236789999999999998864
No 283
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=33.80 E-value=1.2e+02 Score=28.56 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|||++.. | .-.+.+++++.+.|++|.++.+..
T Consensus 4 ~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~~ 35 (451)
T 1ulz_A 4 KVLVANR---G--EIAVRIIRACKELGIPTVAIYNEV 35 (451)
T ss_dssp SEEECCC---H--HHHHHHHHHHHHHTCCEEEEECGG
T ss_pred eEEEECC---c--HHHHHHHHHHHHcCCeEEEEechh
Confidence 6777642 3 235679999999999999887643
No 284
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=33.76 E-value=1.7e+02 Score=22.87 Aligned_cols=23 Identities=13% Similarity=0.082 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcc
Q 044266 21 LLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 21 ~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
..++.+.|.++|+.+.++|....
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEECCCc
Confidence 56788899999999999998753
No 285
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=33.74 E-value=52 Score=25.52 Aligned_cols=44 Identities=9% Similarity=0.123 Sum_probs=34.0
Q ss_pred EEE-EEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 044266 6 HVL-AFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 6 ~Il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 49 (462)
|++ ++..+..-.+++.+.+|...+..|++|+++.+..-...+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 555 45556677788999999999999999999999765544444
No 286
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=33.68 E-value=24 Score=34.27 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|.||+++-.+.-| +.+|+.|.+.|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 35699998765444 578899999999999998764
No 287
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=33.55 E-value=45 Score=26.62 Aligned_cols=38 Identities=18% Similarity=0.242 Sum_probs=28.5
Q ss_pred CEEEEEcCCCc--c-ChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQ--G-HVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~--G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+|+++|.=+. . -.++..+|++.|.++|.+|.|..+|-
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36777663221 1 34589999999999999999999874
No 288
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=33.52 E-value=50 Score=24.12 Aligned_cols=37 Identities=8% Similarity=0.038 Sum_probs=27.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLN 39 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 39 (462)
+.+||+++|..+.|+-.-.-.+-+.+.++|.++.+-.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3478999999988887555567777777887655433
No 289
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=33.38 E-value=87 Score=22.43 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC-CEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHG-VKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~ 42 (462)
+++|+++.. |.+- ..+++.|.++| |+|+++....
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCCH
Confidence 457777644 4332 46788999999 9998887643
No 290
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=33.08 E-value=39 Score=32.47 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC-CC-EEEEEeCCcc
Q 044266 2 LRRPHVLAFPYPAQGHVIPLLEISQCLVKH-GV-KVTFLNTDYN 43 (462)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~ 43 (462)
++.+||.++-.|..| +.+|..|+++ || +|+++-....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 346799999888888 5788999999 99 9999876544
No 291
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=32.94 E-value=67 Score=26.86 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhc-cCCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 92 EKLEELIENINRL-ENEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 92 ~~~~~l~~~l~~~-~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
..++++++..+.. .+.+.-+||+|.-...+...|+++|||+..+.+
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 4467777776541 123678899986666677889999999987654
No 292
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=32.91 E-value=57 Score=28.37 Aligned_cols=39 Identities=15% Similarity=0.006 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|..+.|+++++.++. -+ -.++|+.|+++|++|..+....
T Consensus 1 M~~~~k~vlVTGas~-gI--G~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 1 MSESAKVWLVTGASS-GF--GRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp ---CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCCCcEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeCCH
Confidence 443457777775554 22 3478999999999998887643
No 293
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=32.81 E-value=1.9e+02 Score=25.24 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 467888866653 3467899999999999988653
No 294
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=32.70 E-value=71 Score=23.20 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=22.4
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 7899999997654 344444433 67888876544
No 295
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=32.66 E-value=16 Score=32.39 Aligned_cols=27 Identities=4% Similarity=-0.065 Sum_probs=22.4
Q ss_pred ccceeccCchhhhhhhh----cCCceecccc
Q 044266 348 ACFLSHCGWNSTMEGVS----NGVPFLCWPY 374 (462)
Q Consensus 348 ~~~I~HgG~~sv~eal~----~GvP~l~~P~ 374 (462)
+++|+=||-||+++++. .++|++.++.
T Consensus 65 D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 65 DLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp SEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 44999999999999974 3789988863
No 296
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=32.61 E-value=37 Score=30.92 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 2 LRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 2 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
..+..|+++-.+..| +.+|.+|+++|++|+++-..
T Consensus 4 ~~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIG-----LSSALILARKGYSVHILARD 38 (363)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEecc
Confidence 346789988777555 67888999999999999654
No 297
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=32.59 E-value=38 Score=28.27 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=25.2
Q ss_pred CCceEEE-eCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 107 EKITCVV-ADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
..||++| +|+..- .++.-|.++|||++.++-+.
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 5788876 666444 67788999999999986544
No 298
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=32.48 E-value=1.2e+02 Score=25.73 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 9 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 9 DAVAVVTGGASG---LGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp -CEEEEETTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777766543 235789999999999998876
No 299
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=32.28 E-value=38 Score=28.22 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+++|.++-.+..| ..+|+.|+++||+|+++...
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 5688888766555 56788999999999988643
No 300
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=32.16 E-value=1.7e+02 Score=25.50 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=27.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
-|+++++.++.| ==.++|+.|++.|.+|.+..-.
T Consensus 29 gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 29 AKIAVITGATSG---IGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 489999988775 3467899999999999887654
No 301
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=32.15 E-value=62 Score=24.13 Aligned_cols=32 Identities=16% Similarity=0.004 Sum_probs=21.7
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-------CCceEEEccc
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-------KLRRAAFWPA 138 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-------giP~v~~~~~ 138 (462)
.+||+||.|...+ .+..+.+.+ .+|++.++..
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 7899999997654 345444433 5788877654
No 302
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=31.95 E-value=41 Score=30.08 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=26.9
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQ--GHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.+|++++.++. |+ -+.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48998887654 44 378899999999999998654
No 303
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=31.94 E-value=13 Score=33.19 Aligned_cols=33 Identities=18% Similarity=0.073 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
++||+++-.|+.|- .+|..|++.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 46899998888774 5678888899999999875
No 304
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=31.89 E-value=42 Score=27.86 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
||++. |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 2 kilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 66553 4444443 578899999999999998654
No 305
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=31.79 E-value=65 Score=24.67 Aligned_cols=41 Identities=7% Similarity=-0.040 Sum_probs=25.7
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHH-------cCCceEEEccch
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEK-------MKLRRAAFWPAA 139 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 139 (462)
+.++.+.. .+||+||.|...+ .+..+++. -++|++.++...
T Consensus 42 ~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 42 EAVRFLSL---TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHTT---CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 34444444 8999999997654 34444433 367888876544
No 306
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=31.73 E-value=66 Score=25.53 Aligned_cols=43 Identities=12% Similarity=0.052 Sum_probs=34.3
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 044266 7 VLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 7 Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 49 (462)
.+++..+..--+++.+-+|..-+..|++|+++.+..-...+.+
T Consensus 8 ~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 8 NLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 3466667777888999999999999999999999765555544
No 307
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=31.57 E-value=78 Score=23.51 Aligned_cols=33 Identities=9% Similarity=-0.020 Sum_probs=22.0
Q ss_pred CCceEEEeCCCcc--hHHHHHHH-------cCCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEK-------MKLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+.+. -++|++.++...
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 8999999997654 34444433 357888776544
No 308
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=31.56 E-value=2e+02 Score=24.51 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|.++++.++.| ==.++|+.|++.|++|.++...
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56777877665 3467899999999999888754
No 309
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=31.54 E-value=89 Score=22.68 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.||++++..+.|-=.-.-.+-+.+.++|.++.+-..+
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 45899999887755454557777888899877665543
No 310
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=31.42 E-value=44 Score=31.99 Aligned_cols=36 Identities=11% Similarity=0.179 Sum_probs=27.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~ 41 (462)
|.+++||.++-.|..| ..+|..|+++ ||+|+++...
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEECC
Confidence 5556899999877666 4677888888 8999988653
No 311
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=31.13 E-value=46 Score=28.54 Aligned_cols=30 Identities=10% Similarity=-0.037 Sum_probs=22.1
Q ss_pred CCceEEEeCCCcc--hHHHHHHHcCCceEEEc
Q 044266 107 EKITCVVADGSMG--WVMEVAEKMKLRRAAFW 136 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~ 136 (462)
.+||+||...... -...--++.|+|++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 7999999886543 23444567899999874
No 312
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=31.12 E-value=85 Score=23.24 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=28.6
Q ss_pred EEEEcCCCccCh--HHHHHHHHHHHhCCCEEEEEeCCcch
Q 044266 7 VLAFPYPAQGHV--IPLLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 7 Il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
++++..+.+|+. .-.+.+|..+...||+|.++-...-.
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV 44 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV 44 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHH
Confidence 346667777876 55678889988899999998876543
No 313
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=31.08 E-value=51 Score=26.88 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=28.3
Q ss_pred CEEEEEcCCCcc-----ChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQG-----HVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~G-----H~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+|+++| +|| -.++..+|++.|.++|.+|.|..+|-
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 3677766 343 34578999999999999999999874
No 314
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=30.97 E-value=43 Score=29.95 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCC-EEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGV-KVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~ 41 (462)
++||.|+-.|..| ..+|+.|+++|| +|++....
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 5689998877666 478999999999 99988764
No 315
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=30.91 E-value=33 Score=30.90 Aligned_cols=37 Identities=11% Similarity=0.065 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCC----CEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHG----VKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rG----h~Vt~~~~~~ 42 (462)
|++++||.|+-.|..|. .+|..|.+.| |+|++.....
T Consensus 19 ~~~~mkI~iIG~G~mG~-----ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAF-----ALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ---CCCEEEESCSHHHH-----HHHHHHHHTTSSCGGGEEEECSCT
T ss_pred ccCCCEEEEECCCHHHH-----HHHHHHHHCCCCCcceEEEECCCc
Confidence 34567899988776664 5678899999 9999887654
No 316
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=30.83 E-value=78 Score=27.68 Aligned_cols=39 Identities=21% Similarity=0.345 Sum_probs=25.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCC-CEEEEEeCCcc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHG-VKVTFLNTDYN 43 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~~ 43 (462)
|..+++|++. |+.|.+ -..+++.|.++| |+|+.++-...
T Consensus 2 M~~~~~ilVt--GatG~i--G~~l~~~L~~~g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 2 MVDKKLVVVF--GGTGAQ--GGSVARTLLEDGTFKVRVVTRNPR 41 (299)
T ss_dssp --CCCEEEEE--TTTSHH--HHHHHHHHHHHCSSEEEEEESCTT
T ss_pred CCCCCEEEEE--CCCchH--HHHHHHHHHhcCCceEEEEEcCCC
Confidence 4334566553 455544 346788999889 99999986543
No 317
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=30.81 E-value=38 Score=30.59 Aligned_cols=31 Identities=10% Similarity=0.102 Sum_probs=22.2
Q ss_pred CCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||......-...--++.|+|++.+..
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 7999999875433334445677999999754
No 318
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=30.77 E-value=2e+02 Score=22.68 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=73.6
Q ss_pred EEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCccccee
Q 044266 273 IYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLS 352 (462)
Q Consensus 273 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~ 352 (462)
|-|-.||.+ +....++....++..|.++=..+.+. .-.|+...+. +-+. ..++ +|.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa------HR~p~~~~~~----------~~~a----~~~V--iIa 57 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA------HRTPELVEEI----------VKNS----KADV--FIA 57 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------HHHC----CCSE--EEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHH----------HHhc----CCCE--EEE
Confidence 334566543 66777888888888888765544432 2233332211 1000 0134 676
Q ss_pred ccCch----hhhhhhhcCCceeccccccc-hhhhH--HhHhh-hheeeE-EeecCCCCccCHHHHHHHHHHHhcCHHHHH
Q 044266 353 HCGWN----STMEGVSNGVPFLCWPYFAD-QFLNE--SYICD-IWKVGL-RFNKNKNGIITREEIMKKVDQVLEDENFKA 423 (462)
Q Consensus 353 HgG~~----sv~eal~~GvP~l~~P~~~D-Q~~na--~~v~~-~~g~g~-~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~ 423 (462)
=+|.. ++..++ .-+|+|.+|...- .-..+ ..+.- . |+.+ .+.. ++..++.-++..|. -+.|+++++
T Consensus 58 ~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~I--~~~~nAa~lA~~Il-~~~d~~l~~ 132 (157)
T 2ywx_A 58 IAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVGI--DRGENAAILALEIL-ALKDENIAK 132 (157)
T ss_dssp EEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECCT--TCHHHHHHHHHHHH-TTTCHHHHH
T ss_pred EcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEec--CCcHHHHHHHHHHH-hcCCHHHHH
Confidence 65544 333333 3689999998221 11111 11220 1 5332 1222 25577778887776 456899999
Q ss_pred HHHHHHHHHHhH
Q 044266 424 RALDLKETSLNS 435 (462)
Q Consensus 424 ~a~~l~~~~~~~ 435 (462)
+.+..+++..+.
T Consensus 133 kl~~~r~~~~~~ 144 (157)
T 2ywx_A 133 KLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988874
No 319
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=30.68 E-value=48 Score=28.08 Aligned_cols=36 Identities=8% Similarity=0.001 Sum_probs=28.4
Q ss_pred CCEEEEEcCC--CccChHHHHHHHHHHHhCCCEEEEEe
Q 044266 4 RPHVLAFPYP--AQGHVIPLLEISQCLVKHGVKVTFLN 39 (462)
Q Consensus 4 ~~~Il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 39 (462)
++|.+|++.. +-|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4565555543 45888899999999999999999974
No 320
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=30.66 E-value=45 Score=29.00 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=26.7
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQ--GHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.+|++++.++. |+ -+.+|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 48998887654 44 378899999999999998653
No 321
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=30.54 E-value=98 Score=27.38 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=49.8
Q ss_pred EEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEEE
Q 044266 34 KVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCVV 113 (462)
Q Consensus 34 ~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi 113 (462)
...+.+++.+.-..... |++...+.. ...+. ......+.++++.+++ .+..+|+
T Consensus 184 ~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~~~~~-------------eps~~~l~~l~~~ik~---~~v~~if 237 (294)
T 3hh8_A 184 KLIVTSEGCFKYFSKAY---------GVPSAYIWE-INTEE-------------EGTPDQISSLIEKLKV---IKPSALF 237 (294)
T ss_dssp CCEEEEESCCHHHHHHH---------TCCEEEEES-SCCSC-------------CCCHHHHHHHHHHHHH---SCCSCEE
T ss_pred cEEEEECChHHHHHHHc---------CCceeeccc-cCCCC-------------CCCHHHHHHHHHHHHH---cCCCEEE
Confidence 55566677787778777 777655421 11111 1123446666666666 8999999
Q ss_pred eCCCcc--hHHHHHHHcCCceE
Q 044266 114 ADGSMG--WVMEVAEKMKLRRA 133 (462)
Q Consensus 114 ~D~~~~--~~~~~A~~lgiP~v 133 (462)
++.... .+-.+|+..|++++
T Consensus 238 ~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 238 VESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp EETTSCSHHHHHHHHHHCCCEE
T ss_pred EeCCCCcHHHHHHHHHhCCcEE
Confidence 998766 56688999999998
No 322
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=30.51 E-value=52 Score=26.90 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=28.4
Q ss_pred CEEEEEcCCCcc-----ChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQG-----HVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~G-----H~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+|+++| +|| -.++..+|++.|.++|.+|.|..+|-
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 3677766 343 34578999999999999999999874
No 323
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=30.51 E-value=2.4e+02 Score=24.10 Aligned_cols=39 Identities=13% Similarity=0.342 Sum_probs=29.5
Q ss_pred cHHHHHHHHHHhhccCCCceEEEeCCCcc---hHHHHHHHcCCceEE
Q 044266 91 PEKLEELIENINRLENEKITCVVADGSMG---WVMEVAEKMKLRRAA 134 (462)
Q Consensus 91 ~~~~~~l~~~l~~~~~~~~Dlvi~D~~~~---~~~~~A~~lgiP~v~ 134 (462)
+...+.+++.+++ . .+++.|..+. .+..+|+++|+|++.
T Consensus 114 ~~~m~~vm~~l~~---~--gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE---K--NAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH---T--TCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH---C--CCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4456667777655 3 4999998753 688999999999987
No 324
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=30.50 E-value=39 Score=29.11 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=26.4
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQ--GHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.+|++++.++. |+ -+.+|+.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEcC
Confidence 48888887654 33 378899999999999998653
No 325
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=30.48 E-value=49 Score=29.23 Aligned_cols=37 Identities=5% Similarity=0.020 Sum_probs=27.6
Q ss_pred CEEEEEcCCCccC---hHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGH---VIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 4899888764221 234467999999999999999864
No 326
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=30.29 E-value=77 Score=21.85 Aligned_cols=50 Identities=12% Similarity=0.197 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHhHhhcCCCcHHHHHHHHHHHHhhhc
Q 044266 405 REEIMKKVDQVLEDE-------NFKARALDLKETSLNSVREGGQSDKTFKNFVQWIKAEAS 458 (462)
Q Consensus 405 ~~~l~~~i~~ll~~~-------~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 458 (462)
-++|.+++.++-.|| +|..+..++.-.. ++ ..+..+.++++...|.+.++
T Consensus 27 ~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~eysl~r-Na---qSttiKa~KDi~~sI~~~~~ 83 (85)
T 2ca5_A 27 QGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYR-NA---QSNTVKVIKDVDAAILEHHH 83 (85)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHhcc
Confidence 467788888887766 4555555554333 33 44558899999999888764
No 327
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.26 E-value=76 Score=24.17 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccch
Q 044266 94 LEELIENINRLENEKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAA 139 (462)
Q Consensus 94 ~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 139 (462)
..+.++.+.. .+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 40 ~~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 40 PLDALEALKG---TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHHTT---SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
No 328
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=30.24 E-value=2.4e+02 Score=25.84 Aligned_cols=94 Identities=13% Similarity=0.065 Sum_probs=51.9
Q ss_pred HHHHHHHHhCC-CEEEEEeCCcc-------hHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHH
Q 044266 22 LEISQCLVKHG-VKVTFLNTDYN-------HKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEK 93 (462)
Q Consensus 22 l~La~~L~~rG-h~Vt~~~~~~~-------~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (462)
-.|++.|.+.| .+|.+++.+.. .+.+.+.... .++.+..+++. ... .....
T Consensus 22 ~~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~-----~g~~~~~~~~~-~~~---------------p~~~~ 80 (387)
T 3bfj_A 22 SVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLRE-----AGIEVAIFDGV-EPN---------------PKDTN 80 (387)
T ss_dssp GGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHH-----TTCEEEEECCC-CSS---------------CBHHH
T ss_pred HHHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHH-----cCCeEEEECCc-cCC---------------CCHHH
Confidence 34666677677 78888886643 3333332211 16776655432 111 12233
Q ss_pred HHHHHHHHhhccCCCceEEEeCCC-cc--hHHHHHHH------------------cCCceEEEccch
Q 044266 94 LEELIENINRLENEKITCVVADGS-MG--WVMEVAEK------------------MKLRRAAFWPAA 139 (462)
Q Consensus 94 ~~~l~~~l~~~~~~~~Dlvi~D~~-~~--~~~~~A~~------------------lgiP~v~~~~~~ 139 (462)
+.+.++.+++ .++|+||.=.. .. .+..+|.. .++|++.+-|..
T Consensus 81 v~~~~~~~~~---~~~d~IIavGGGsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 81 VRDGLAVFRR---EQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp HHHHHHHHHH---TTCCEEEEEESHHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECST
T ss_pred HHHHHHHHHh---cCCCEEEEeCCcchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 4455555555 78999995432 22 44455543 488998876655
No 329
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=30.19 E-value=72 Score=26.31 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCccChHHHHH-HHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLE-ISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~-La~~L~~rGh~Vt~~~~~~ 42 (462)
+++||+++-....|+..-+.. +++.|.+.|++|.++.-..
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 467998777666887766554 4666777899988876543
No 330
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=30.04 E-value=71 Score=24.46 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=27.0
Q ss_pred CEEEEEcCCCccChHHHH-HHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLL-EISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~~ 42 (462)
+||+++-...+|+..-+. .+++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 367666556678776544 46777888999999987654
No 331
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=29.92 E-value=44 Score=28.80 Aligned_cols=33 Identities=15% Similarity=0.098 Sum_probs=25.4
Q ss_pred CCceEEE-eCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 107 EKITCVV-ADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
..||+|| +|+..- .++.-|.++|||+|.++-+.
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEEcCC
Confidence 5788876 676544 67788999999999986544
No 332
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.92 E-value=68 Score=28.39 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLN 39 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 39 (462)
|++++||+++... .......+.|.+.||+|.+..
T Consensus 4 ~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 4 MLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred cccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 6677899887532 356677899999999998764
No 333
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=29.79 E-value=50 Score=28.80 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=26.6
Q ss_pred CEEEEEcCCCc--cChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQ--GHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.+|++++.++. |+ -+.+|+.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 48888887654 43 378899999999999998653
No 334
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=29.78 E-value=87 Score=22.91 Aligned_cols=32 Identities=6% Similarity=-0.077 Sum_probs=20.9
Q ss_pred CCceEEEeCCCcc--hHHHHHHH-------cCCceEEEccc
Q 044266 107 EKITCVVADGSMG--WVMEVAEK-------MKLRRAAFWPA 138 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 138 (462)
.+||+||.|...+ .+..+.+. -++|++.++..
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 7899999997654 34433322 26788877653
No 335
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=29.76 E-value=64 Score=28.77 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=24.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|....+||++....-=-..-+-.+...++++|++|++++-.
T Consensus 1 m~~~~~vL~v~AHPDDe~l~~ggtla~~~~~G~~V~vv~lT 41 (303)
T 1q74_A 1 MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCT 41 (303)
T ss_dssp --CCCEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCeEEEEEeCCchHHHhHHHHHHHHHHCCCcEEEEEEc
Confidence 55566887555333333333445555667789999999743
No 336
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=29.63 E-value=24 Score=32.85 Aligned_cols=31 Identities=23% Similarity=0.487 Sum_probs=23.4
Q ss_pred ccCCCCcccceeccCchhhhhhhhc----CC-ceeccc
Q 044266 341 VLTHPSIACFLSHCGWNSTMEGVSN----GV-PFLCWP 373 (462)
Q Consensus 341 ll~~~~~~~~I~HgG~~sv~eal~~----Gv-P~l~~P 373 (462)
+-..+++ +|+=||-||++.++.. ++ |++.+.
T Consensus 111 ~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN 146 (388)
T 3afo_A 111 IVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFA 146 (388)
T ss_dssp HHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEE
T ss_pred cccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEE
Confidence 3344555 9999999999999653 67 788774
No 337
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=29.57 E-value=28 Score=31.33 Aligned_cols=37 Identities=16% Similarity=0.216 Sum_probs=27.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCC-EEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGV-KVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~ 42 (462)
|.+++||.++-.|..|.. +|..|+++|| +|+++-...
T Consensus 1 M~~~~kI~VIGaG~~G~~-----ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGN-----IAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHH-----HHHHHHhCCCceEEEEeCCc
Confidence 666789999876555543 7888999999 988887654
No 338
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=29.45 E-value=40 Score=30.31 Aligned_cols=34 Identities=6% Similarity=0.108 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC-CEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHG-VKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~ 42 (462)
++||.|+-.|..| ..+|+.|+++| |+|++.....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCCC
Confidence 4689998877666 67899999999 9999887653
No 339
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=29.44 E-value=83 Score=23.84 Aligned_cols=44 Identities=18% Similarity=0.149 Sum_probs=28.4
Q ss_pred HHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccchh
Q 044266 94 LEELIENINRLENEKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAAA 140 (462)
Q Consensus 94 ~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 140 (462)
..+.++.+.. .+||+||.|...+ .+..+++.+ ++|++.++....
T Consensus 55 ~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 55 GQEAIQLLEK---ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHHTT---SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 4455556655 8999999997654 344444432 688887765543
No 340
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=29.43 E-value=58 Score=27.32 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~~ 36 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARSV 36 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 356677755543 34588999999999998887643
No 341
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=29.34 E-value=78 Score=28.16 Aligned_cols=39 Identities=10% Similarity=-0.041 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccC----hHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGH----VIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++||+++..+-.+- +.....++++|.+.||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46888877543322 3467889999999999999998544
No 342
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=29.26 E-value=2e+02 Score=26.53 Aligned_cols=93 Identities=13% Similarity=0.045 Sum_probs=52.3
Q ss_pred HHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEE--EEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHH
Q 044266 23 EISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKL--VSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIEN 100 (462)
Q Consensus 23 ~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (462)
.|.+.|.+.|.+|.+++.+...+...+....... . ++.+ ..++ ... . ...+.++.+.
T Consensus 43 ~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L~-~-g~~~~~~~~~----~~p-~--------------~~~v~~~~~~ 101 (387)
T 3uhj_A 43 KLAAYLAPLGKRALVLIDRVLFDALSERIGKSCG-D-SLDIRFERFG----GEC-C--------------TSEIERVRKV 101 (387)
T ss_dssp TTHHHHGGGCSEEEEEECTTTHHHHHHHC--------CCEEEEEECC----SSC-S--------------HHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEECchHHHHHHHHHHHHHH-c-CCCeEEEEcC----CCC-C--------------HHHHHHHHHH
Confidence 4566677778899999988765543332211111 1 4443 2222 111 1 1223444444
Q ss_pred HhhccCCCceEEEeCCCcc---hHHHHHHHcCCceEEEccch
Q 044266 101 INRLENEKITCVVADGSMG---WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 101 l~~~~~~~~Dlvi~D~~~~---~~~~~A~~lgiP~v~~~~~~ 139 (462)
+++ .++|+||.=..-. .+..+|...++|++.+-|..
T Consensus 102 ~~~---~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTTa 140 (387)
T 3uhj_A 102 AIE---HGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTIA 140 (387)
T ss_dssp HHH---HTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred Hhh---cCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCcc
Confidence 444 6899999765433 56677888899999976653
No 343
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=29.17 E-value=40 Score=30.59 Aligned_cols=27 Identities=19% Similarity=0.136 Sum_probs=22.6
Q ss_pred ccceeccCchhhhhhhh------cCCceecccc
Q 044266 348 ACFLSHCGWNSTMEGVS------NGVPFLCWPY 374 (462)
Q Consensus 348 ~~~I~HgG~~sv~eal~------~GvP~l~~P~ 374 (462)
+++|.-||=||+.|++. .++|+.++|.
T Consensus 82 d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 82 DVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CEEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 44999999999999853 5789999997
No 344
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=29.13 E-value=2e+02 Score=25.80 Aligned_cols=107 Identities=13% Similarity=0.147 Sum_probs=55.5
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccc
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGLELT-NRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACF 350 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~ 350 (462)
+.+|..|.++. ..+.++... +.+++.++... . .....+.++. + ...+-...+++..++++++
T Consensus 7 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~----~--~~~~~~a~~~--g--~~~~~~~~~~l~~~~~D~V 69 (344)
T 3euw_A 7 IALFGAGRIGH-------VHAANIAANPDLELVVIADPF----I--EGAQRLAEAN--G--AEAVASPDEVFARDDIDGI 69 (344)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS----H--HHHHHHHHTT--T--CEEESSHHHHTTCSCCCEE
T ss_pred EEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCC----H--HHHHHHHHHc--C--CceeCCHHHHhcCCCCCEE
Confidence 77888887653 345555443 45555555433 0 0011111111 1 2233445678876666667
Q ss_pred eeccCc----hhhhhhhhcCCceec-ccccc--chhhh-HHhHhhhheeeEEee
Q 044266 351 LSHCGW----NSTMEGVSNGVPFLC-WPYFA--DQFLN-ESYICDIWKVGLRFN 396 (462)
Q Consensus 351 I~HgG~----~sv~eal~~GvP~l~-~P~~~--DQ~~n-a~~v~~~~g~g~~~~ 396 (462)
+----. .-+.+++.+|+++++ -|+.. ++..- ...+++ .|+-+.+.
T Consensus 70 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~ 122 (344)
T 3euw_A 70 VIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD-GASKVMLG 122 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG-GGGGEEEC
T ss_pred EEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh-cCCeEEec
Confidence 754433 347788999999876 36543 33322 233344 36655553
No 345
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=29.05 E-value=1.3e+02 Score=24.45 Aligned_cols=39 Identities=8% Similarity=-0.028 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.++||+++..++.. ..-+....+.|.+.|++|++++...
T Consensus 22 ~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 22 LSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35689988876554 3445667788888999999999864
No 346
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.96 E-value=78 Score=23.10 Aligned_cols=42 Identities=10% Similarity=0.060 Sum_probs=24.2
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccchh
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAAA 140 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 140 (462)
+.++.+.. .+||+||.|...+ .+..+.+.+ ++|++.++....
T Consensus 42 ~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 42 DALELLGG---FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp HHHHHHTT---CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred HHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 33444444 8899999997554 233333332 588888765543
No 347
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=28.94 E-value=83 Score=25.73 Aligned_cols=61 Identities=18% Similarity=0.235 Sum_probs=36.7
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch---HHHHHhhcCCCCCCCCeEEEEcCCC
Q 044266 7 VLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH---KRVVNALGQNNYIGDQIKLVSIPDG 69 (462)
Q Consensus 7 Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~---~~v~~~~~~~~~~~~~i~~~~i~~~ 69 (462)
|+|+..+...+-.....+++.|++.|++|++++..... + ++...... ....+..+..+|++
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~-n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAA-NSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHH-CSTTCCEEEEECCC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhc-cCCCceEEEEecCc
Confidence 45555555566777888999999999999988754321 2 22211110 11236677777765
No 348
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=28.93 E-value=2.3e+02 Score=22.86 Aligned_cols=145 Identities=16% Similarity=0.151 Sum_probs=78.7
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIAC 349 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~ 349 (462)
+|.|-|-+||.+ +.+..++..+.|++.+..+-..+-+. .-.|+.+.+. +-. ...-.++.
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~~----------~~~---a~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEY----------AET---ARERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHH---TTTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHHH----------HHH---HHhcCceE
Confidence 567888899855 66778888888988888876555433 2233322211 100 00011223
Q ss_pred ceeccCch----hhhhhhhcCCceeccccccc---hhhhHHhHhhhheeeEEeec---CCCCccCHHHHHHHHHHHhcCH
Q 044266 350 FLSHCGWN----STMEGVSNGVPFLCWPYFAD---QFLNESYICDIWKVGLRFNK---NKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 350 ~I~HgG~~----sv~eal~~GvP~l~~P~~~D---Q~~na~~v~~~~g~g~~~~~---~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
+|.=.|.- ++..+ ..-+|+|.+|.... -.+.---+.. +--|+-+-. .+.+..++.-++..|-. +.|+
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~d~ 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHD 157 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TTCH
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cCCH
Confidence 66655543 33333 45689999997543 2222222222 222322211 00012345556655543 4589
Q ss_pred HHHHHHHHHHHHHHhHhhc
Q 044266 420 NFKARALDLKETSLNSVRE 438 (462)
Q Consensus 420 ~~~~~a~~l~~~~~~~~~~ 438 (462)
+++++.+..++...+.+.+
T Consensus 158 ~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999988888775543
No 349
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=28.92 E-value=36 Score=30.27 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.||.++-.|..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 45899988877776 5788899999999988764
No 350
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=28.89 E-value=40 Score=32.14 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++||.++-.|..| ..+|..|+++||+|+++....
T Consensus 2 ~mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 2 SLDIAVVGIGYVG-----LVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECCH
Confidence 3699998766555 568999999999999887654
No 351
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=28.84 E-value=2.4e+02 Score=23.17 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=39.4
Q ss_pred hhcCCceeccc----cccchhhhHHhHhhhheeeEEeec---C----CCC-ccCHHHHHHHHHHHhcC
Q 044266 363 VSNGVPFLCWP----YFADQFLNESYICDIWKVGLRFNK---N----KNG-IITREEIMKKVDQVLED 418 (462)
Q Consensus 363 l~~GvP~l~~P----~~~DQ~~na~~v~~~~g~g~~~~~---~----~~~-~~~~~~l~~~i~~ll~~ 418 (462)
+..++|++++| ....++.|..++.+ +|+=+..+. + ++. ..+.+.|.+.|.++|++
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 55799999998 46788889999998 587655443 1 111 13457888999998864
No 352
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=28.76 E-value=2.3e+02 Score=22.88 Aligned_cols=145 Identities=15% Similarity=0.136 Sum_probs=80.4
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIAC 349 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~ 349 (462)
.+.|-|-.||.+ +....++....++..|.++-+.+.+. .-.|+.+.+. +-+.. -...+|
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~----------~~~a~-~~g~~V-- 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA------HRTPDRLADY----------ARTAA-ERGLNV-- 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHHH----------HHHTT-TTTCCE--
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHHH----------HHHHH-hCCCcE--
Confidence 346667778654 67778888888888888865554432 2233332211 10000 001223
Q ss_pred ceeccCch----hhhhhhhcCCceeccccccch--hhhH--HhHh-hhheeeEE-eecCCCCccCHHHHHHHHHHHhcCH
Q 044266 350 FLSHCGWN----STMEGVSNGVPFLCWPYFADQ--FLNE--SYIC-DIWKVGLR-FNKNKNGIITREEIMKKVDQVLEDE 419 (462)
Q Consensus 350 ~I~HgG~~----sv~eal~~GvP~l~~P~~~DQ--~~na--~~v~-~~~g~g~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 419 (462)
+|.=.|.. ++..++ .-+|+|.+|..... -..+ -.+. -. |+.+- +..++.+..++.-++..|. -+.|+
T Consensus 80 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 156 (182)
T 1u11_A 80 IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP 156 (182)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH
Confidence 77666643 444444 46899999975321 1111 1112 12 55521 2221013367777777776 55699
Q ss_pred HHHHHHHHHHHHHHhHhhc
Q 044266 420 NFKARALDLKETSLNSVRE 438 (462)
Q Consensus 420 ~~~~~a~~l~~~~~~~~~~ 438 (462)
+++++.+..+++..+.+.+
T Consensus 157 ~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 157 ALAARLETWRALQTASVPN 175 (182)
T ss_dssp HHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999876543
No 353
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=28.76 E-value=30 Score=31.81 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+..+|+++-.+..| +.+|..|+++|++|+++-...
T Consensus 4 ~~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCCC
Confidence 35678888766555 778999999999999997654
No 354
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=28.69 E-value=46 Score=30.09 Aligned_cols=63 Identities=6% Similarity=0.118 Sum_probs=38.0
Q ss_pred cCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhh
Q 044266 283 FDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEG 362 (462)
Q Consensus 283 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~ea 362 (462)
.+.+..+.+.+++.....+.||...++- +..++.++++...+-++|+. ||-..-..+++-+
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~a 122 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF-----------------NSNQLLPYLDYDLISENPKI--LCGFSDITALATA 122 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch-----------------hHHHHhhhcchhhhccCCeE--EEecccccHHHHH
Confidence 3555677788889888888888876651 11234455554555555554 5555555555555
Q ss_pred hh
Q 044266 363 VS 364 (462)
Q Consensus 363 l~ 364 (462)
++
T Consensus 123 l~ 124 (327)
T 4h1h_A 123 IY 124 (327)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 355
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.54 E-value=55 Score=29.21 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeC
Q 044266 1 MLRRPHVLAFPYPAQGHVIP-LLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~ 40 (462)
|..+.||+++.-+..++... .-.+.+.|.++|++|.+..+
T Consensus 1 m~~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 54456899999988876544 66788899999999887654
No 356
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=28.48 E-value=82 Score=23.95 Aligned_cols=42 Identities=5% Similarity=0.035 Sum_probs=26.2
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHH-----cCCceEEEccchh
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEK-----MKLRRAAFWPAAA 140 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 140 (462)
+.++.+.. .+||+||.|...+ .+..+.+. -++|++.++....
T Consensus 49 ~a~~~l~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 97 (153)
T 3hv2_A 49 QALQLLAS---REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPD 97 (153)
T ss_dssp HHHHHHHH---SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCC
T ss_pred HHHHHHHc---CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCC
Confidence 34444444 8999999997655 34444433 2688887765443
No 357
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=28.41 E-value=91 Score=26.32 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=26.5
Q ss_pred HHHHHHhhccCCCceEEEeCCCcch-------HHHHHHHcCCceEEEc
Q 044266 96 ELIENINRLENEKITCVVADGSMGW-------VMEVAEKMKLRRAAFW 136 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~~-------~~~~A~~lgiP~v~~~ 136 (462)
.+++.+++.. .+||++++|..... +..+.-.+|+|+|.+.
T Consensus 92 ~~l~al~~L~-~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 92 LFLKAWEKLR-TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHTTCC-SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHhcC-CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 3444444422 68999999987664 3445566689999864
No 358
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=28.40 E-value=2.7e+02 Score=24.60 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=24.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 27 gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 27 GRVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367788866542 245789999999999998864
No 359
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=28.38 E-value=87 Score=26.26 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccC----hHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGH----VIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.+|.+++....+- ..-...|++.|+++|+.|..-..+
T Consensus 13 m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 13 FRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp CSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 44788886665542 235678888899999998776654
No 360
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=28.37 E-value=99 Score=21.84 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=21.1
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccc
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPA 138 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~ 138 (462)
.+||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 7899999997654 344444433 5777776543
No 361
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=28.22 E-value=42 Score=28.86 Aligned_cols=31 Identities=10% Similarity=0.022 Sum_probs=21.5
Q ss_pred CCceEEEeCCCcc-hHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMG-WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||...... .....-++.|||++.+..
T Consensus 59 l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 59 LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred cCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 6999999864332 233445678999998754
No 362
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=28.11 E-value=23 Score=32.61 Aligned_cols=31 Identities=10% Similarity=0.177 Sum_probs=23.7
Q ss_pred cccCCCCcccceeccCchhhhhhhh----cCCceecc
Q 044266 340 KVLTHPSIACFLSHCGWNSTMEGVS----NGVPFLCW 372 (462)
Q Consensus 340 ~ll~~~~~~~~I~HgG~~sv~eal~----~GvP~l~~ 372 (462)
++-..+|+ +|+=||-||++.|.. .++|++.+
T Consensus 104 ~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 104 DISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp CCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred hcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 44445555 999999999999976 35788776
No 363
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=28.01 E-value=2.1e+02 Score=31.00 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcch
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
|+...|||+.- .|. -.+.+++++.+.|++|..+.+....
T Consensus 1 M~~~kkVLIag---rGe--ia~riiraa~elGi~vVav~s~~d~ 39 (1150)
T 3hbl_A 1 MKQIKKLLVAN---RGE--IAIRIFRAAAELDISTVAIYSNEDK 39 (1150)
T ss_dssp --CCCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEECGGGT
T ss_pred CCCCCEEEEEC---CCH--HHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 55456788743 333 4568999999999999999765543
No 364
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=27.99 E-value=33 Score=31.51 Aligned_cols=42 Identities=12% Similarity=0.209 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc-hHHHHHh
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN-HKRVVNA 50 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~-~~~v~~~ 50 (462)
++||.++-.|..|. .+|..|++.||+|++...... .+.+.+.
T Consensus 29 ~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~~~~~~~i~~~ 71 (356)
T 3k96_A 29 KHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYESDHVDEMQAE 71 (356)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSCHHHHHHHHHH
T ss_pred CCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 56899988877774 688999999999999987533 3444443
No 365
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=27.96 E-value=1.2e+02 Score=21.29 Aligned_cols=33 Identities=12% Similarity=0.060 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
..+|++++..+ ......++.|.+.|++|..+..
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 35788887443 4567788999999998877654
No 366
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=27.94 E-value=51 Score=29.52 Aligned_cols=31 Identities=10% Similarity=-0.027 Sum_probs=21.9
Q ss_pred CCceEEEeCCCcc-hHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMG-WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||...... ....--++.|||++.+..
T Consensus 83 l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 83 LKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp TCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred cCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 6999999875432 233445677999998754
No 367
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=27.81 E-value=35 Score=30.38 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
++||.|+-.|..|. .+|+.|+++||+|++....
T Consensus 7 ~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEECC
Confidence 56899987776664 6789999999999988654
No 368
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=27.67 E-value=63 Score=27.26 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCH
Confidence 356677755543 23578999999999998887643
No 369
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=27.61 E-value=50 Score=26.37 Aligned_cols=36 Identities=28% Similarity=0.387 Sum_probs=28.6
Q ss_pred CEEEEEcCCCcc-----ChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQG-----HVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~G-----H~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+|+++| +|| -.++..+|++.|.++|.+|.|...|-
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3677765 444 34589999999999999999999874
No 370
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=27.58 E-value=57 Score=27.91 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=21.2
Q ss_pred CCceEEEeCCCcc--hHHHHHHHcCCceEEEc
Q 044266 107 EKITCVVADGSMG--WVMEVAEKMKLRRAAFW 136 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~ 136 (462)
.+||+||...... .....-++.|||++.+.
T Consensus 58 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 58 LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 7999999875432 23344567899998874
No 371
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=27.57 E-value=40 Score=30.65 Aligned_cols=31 Identities=6% Similarity=-0.141 Sum_probs=21.5
Q ss_pred CCceEEEeCCCcc-hHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMG-WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~-~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||...... ....+.+.+|||++.+..
T Consensus 95 l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 95 LQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 4999999875422 223445778999998753
No 372
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=27.57 E-value=70 Score=28.66 Aligned_cols=75 Identities=11% Similarity=0.244 Sum_probs=50.9
Q ss_pred ccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccC-CCCcccceeccCchhhh
Q 044266 282 VFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLT-HPSIACFLSHCGWNSTM 360 (462)
Q Consensus 282 ~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~-~~~~~~~I~HgG~~sv~ 360 (462)
..+.+..+.+.+++.....+.||...++- +..++.++++...+-+ +|+. ||-+.-...++
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~ 123 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY-----------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVLL 123 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS-----------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc-----------------CHHHHhhccchhhhhccCCCE--EEEEchhHHHH
Confidence 34556677788888888888888877661 2233555565555555 6777 88888888888
Q ss_pred hhhh-cCCceeccccc
Q 044266 361 EGVS-NGVPFLCWPYF 375 (462)
Q Consensus 361 eal~-~GvP~l~~P~~ 375 (462)
-+++ .|++.+-=|..
T Consensus 124 ~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 124 SAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHTTCCEEECCCG
T ss_pred HHHHHcCCcEEECHhh
Confidence 8886 37777666643
No 373
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.55 E-value=81 Score=26.47 Aligned_cols=35 Identities=11% Similarity=-0.054 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|.++++.++.| --.++|+.|+++|++|+++.-..
T Consensus 3 ~k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 3 SGKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp CEEEEEETTTSH---HHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEecCc
Confidence 366677755442 34678999999999999887543
No 374
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=27.54 E-value=2.3e+02 Score=22.47 Aligned_cols=98 Identities=10% Similarity=0.039 Sum_probs=52.8
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcc------hHHHHHhhcCCCCCCCCeEEEEcCCCCC-CCCCCCCHHHHHHHHHHhccHH
Q 044266 21 LLEISQCLVKHGVKVTFLNTDYN------HKRVVNALGQNNYIGDQIKLVSIPDGME-PEGDRNDLGMLTKTMVRVMPEK 93 (462)
Q Consensus 21 ~l~La~~L~~rGh~Vt~~~~~~~------~~~v~~~~~~~~~~~~~i~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 93 (462)
...+.+.|.++|+.+.++|.... ...+...+. ..-+..+...+... .....+ + -...
T Consensus 39 ~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl-----~~~fd~i~~~~~~~~~~~~~K-P----------~p~~ 102 (189)
T 3ib6_A 39 AKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGI-----IDYFDFIYASNSELQPGKMEK-P----------DKTI 102 (189)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTC-----GGGEEEEEECCTTSSTTCCCT-T----------SHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCc-----hhheEEEEEccccccccCCCC-c----------CHHH
Confidence 56788999999999999997543 222333310 01233333333221 101111 1 1122
Q ss_pred HHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 94 LEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 94 ~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
+..+++.+.. ..-++++++.....-...|+..|+.++.+..
T Consensus 103 ~~~~~~~~~~---~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~ 143 (189)
T 3ib6_A 103 FDFTLNALQI---DKTEAVMVGNTFESDIIGANRAGIHAIWLQN 143 (189)
T ss_dssp HHHHHHHHTC---CGGGEEEEESBTTTTHHHHHHTTCEEEEECC
T ss_pred HHHHHHHcCC---CcccEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence 3333344332 4445666664545678889999999998755
No 375
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=27.43 E-value=49 Score=29.72 Aligned_cols=30 Identities=30% Similarity=0.270 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
||.++-.|..|. .+|..|+++||+|+++..
T Consensus 2 ~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 788887766663 568889999999999876
No 376
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=27.36 E-value=72 Score=23.53 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=22.6
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccchh
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAAA 140 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 140 (462)
.+||+||.|...+ .+..+.+.+ ++|++.++....
T Consensus 48 ~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 88 (133)
T 3b2n_A 48 YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKR 88 (133)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCC
Confidence 6899999997654 344444433 588888765443
No 377
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.32 E-value=80 Score=26.02 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=28.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 46666667778888899999999999999887765
No 378
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=27.24 E-value=75 Score=28.37 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC-C-CEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKH-G-VKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~~ 42 (462)
++++|+++..+.. .++++.|++. | ++|.++....
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 3579999865554 4789999875 7 8988886654
No 379
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=27.19 E-value=55 Score=28.71 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+||.++-.|..| ..+|+.|+++||+|++.....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCCH
Confidence 588888766655 467889999999999886543
No 380
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=27.04 E-value=1.1e+02 Score=18.61 Aligned_cols=31 Identities=13% Similarity=0.294 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 404 TREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 404 ~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
|.+++.+-.+.--.||.++.+-+.++..+..
T Consensus 2 skqEvK~E~Ke~EGdP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 2 DKEEVKREMKEQEGNPEVKSKRREVHMEILS 32 (48)
T ss_pred CHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 6788888999999999999988888887765
No 381
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=26.91 E-value=69 Score=26.85 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=29.7
Q ss_pred EEEEE-c-CCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 6 HVLAF-P-YPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 6 ~Il~~-~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
|++.+ . -++.|-..-...||..|+++|++|.++-....
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 44443 3 34668888999999999999999999977653
No 382
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=26.81 E-value=75 Score=22.72 Aligned_cols=34 Identities=12% Similarity=0.015 Sum_probs=22.5
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccchh
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAAA 140 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 140 (462)
.+||+||.|...+ .+..+++.+ ++|.+.++....
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 6899999997655 344444433 578887765443
No 383
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=26.80 E-value=50 Score=28.50 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=31.1
Q ss_pred CCEEEEEc--CCCccChHHHHHHHHHHHhCCCEEEEEeCCcch
Q 044266 4 RPHVLAFP--YPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNH 44 (462)
Q Consensus 4 ~~~Il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 44 (462)
+++++.+. -|+-|=..-...||..|+++|++|.++=.....
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 44555443 345688889999999999999999998766544
No 384
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=26.78 E-value=44 Score=29.58 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+++|++. |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 7 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 7 KHRILIT--GGAGFIG--GHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCCS
T ss_pred CCeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecCC
Confidence 4566653 4445443 468899999999999987543
No 385
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=26.72 E-value=91 Score=22.32 Aligned_cols=33 Identities=3% Similarity=0.008 Sum_probs=22.3
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc----CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM----KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l----giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+++.+ .+|.+.++...
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 7899999997654 355555443 57877766544
No 386
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=26.43 E-value=1e+02 Score=22.01 Aligned_cols=34 Identities=12% Similarity=-0.001 Sum_probs=22.6
Q ss_pred CCceEEEeCCCcc--hHHHHHHH----cCCceEEEccchh
Q 044266 107 EKITCVVADGSMG--WVMEVAEK----MKLRRAAFWPAAA 140 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 140 (462)
.+||+||.|...+ .+..+++. -++|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 7899999997654 34444443 3688887765443
No 387
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=26.35 E-value=47 Score=29.18 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+||.++-.|..|. .+|+.|+++||+|++.....
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCCH
Confidence 4788987777774 56889999999999987654
No 388
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=26.29 E-value=93 Score=23.12 Aligned_cols=40 Identities=20% Similarity=0.230 Sum_probs=24.7
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccch
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAA 139 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 139 (462)
+.++.+.. .+||+||.|. .+ .+..+.+.+ ++|++.++...
T Consensus 39 ~a~~~l~~---~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 39 EAFTFLRR---EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHTT---SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHhc---cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 34444444 7899999997 44 233333332 58888876554
No 389
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=26.29 E-value=2.1e+02 Score=24.37 Aligned_cols=29 Identities=7% Similarity=-0.159 Sum_probs=19.6
Q ss_pred CCceEEEeCCCcchH-HHHHHHcCCceEEE
Q 044266 107 EKITCVVADGSMGWV-MEVAEKMKLRRAAF 135 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~-~~~A~~lgiP~v~~ 135 (462)
.++|+||.-=++..+ -.+.+.+++|++.+
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 689998866544433 45556679999875
No 390
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=26.25 E-value=95 Score=26.02 Aligned_cols=46 Identities=13% Similarity=0.186 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhccCCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 92 EKLEELIENINRLENEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 92 ~~~~~l~~~l~~~~~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
..++++++.++...+.+.-+||+|.-...+...|+++|||+..+.+
T Consensus 17 snl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 17 TNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 3466666665531114677889987666677889999999998654
No 391
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=26.24 E-value=54 Score=27.38 Aligned_cols=41 Identities=20% Similarity=0.157 Sum_probs=27.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|.+...|+|+. |..++..-+..++..|.++|++|..+-.+.
T Consensus 1 me~g~~vv~lH-G~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 1 MERKHHFVLVH-NAYHGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp --CCCEEEEEC-CTTCCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CCCCCcEEEEC-CCCCccccHHHHHHHHHhCCCEEEEecCCC
Confidence 44445566665 555555567789999999999988776543
No 392
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=26.02 E-value=1.1e+02 Score=22.83 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=26.8
Q ss_pred HHHHHHHHhhccCCCceEEEeCCCcc--hHHHHHHH-------cCCceEEEccch
Q 044266 94 LEELIENINRLENEKITCVVADGSMG--WVMEVAEK-------MKLRRAAFWPAA 139 (462)
Q Consensus 94 ~~~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 139 (462)
..+.++.+.. .+||+||.|...+ .+..+.+. -++|++.++...
T Consensus 40 ~~~a~~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 40 GAKALYQVQQ---AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp HHHHHHHHTT---CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred HHHHHHHhhc---CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 3344555555 8999999997655 34444332 357888876543
No 393
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=25.99 E-value=56 Score=29.65 Aligned_cols=72 Identities=14% Similarity=0.233 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccceeccCchhhhhhh
Q 044266 284 DKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACFLSHCGWNSTMEGV 363 (462)
Q Consensus 284 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~I~HgG~~sv~eal 363 (462)
+.+..+.+.+++.....+.||...++- +..++.++++...+-++|+. ||-..-...++-++
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 124 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM-----------------NSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGI 124 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHhhhcChhHHhhCCeE--EEEechHHHHHHHH
Confidence 455677788888877788888776651 12334455555555556666 77777777777777
Q ss_pred h--cCCceecccc
Q 044266 364 S--NGVPFLCWPY 374 (462)
Q Consensus 364 ~--~GvP~l~~P~ 374 (462)
+ .|++.+-=|.
T Consensus 125 ~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 125 YAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHCCCEEECCC
T ss_pred HHhcCceEEECCh
Confidence 6 4776666664
No 394
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=25.91 E-value=1.4e+02 Score=24.57 Aligned_cols=38 Identities=21% Similarity=0.219 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.||+++..++. ...-+....+.|.+.|++|++++...
T Consensus 2 ~~kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (205)
T 2ab0_A 2 SASALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVAS 39 (205)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CcEEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 348887777655 34556667788999999999999764
No 395
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.90 E-value=93 Score=22.54 Aligned_cols=32 Identities=9% Similarity=-0.034 Sum_probs=20.8
Q ss_pred CCceEEEeCCCcc--hHHHHHHH-------cCCceEEEccc
Q 044266 107 EKITCVVADGSMG--WVMEVAEK-------MKLRRAAFWPA 138 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 138 (462)
.+||+||.|...+ .+..+++. .++|++.++..
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 7899999997654 34444332 35777776543
No 396
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=25.86 E-value=1.4e+02 Score=28.20 Aligned_cols=32 Identities=25% Similarity=0.276 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
..||+++-.+..| +.+|+.|+++||+|+..=.
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4689998876544 3469999999999999765
No 397
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=25.76 E-value=80 Score=23.46 Aligned_cols=33 Identities=6% Similarity=-0.096 Sum_probs=22.5
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc----CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM----KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l----giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+++.+ .+|++.++...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 7899999997554 345444443 68888776544
No 398
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=25.75 E-value=4e+02 Score=24.61 Aligned_cols=93 Identities=24% Similarity=0.255 Sum_probs=50.8
Q ss_pred HHHHHHHhCC-CEEEEEeCCc-c-----hHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHH
Q 044266 23 EISQCLVKHG-VKVTFLNTDY-N-----HKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLE 95 (462)
Q Consensus 23 ~La~~L~~rG-h~Vt~~~~~~-~-----~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (462)
.|.+.|.+.| .+|.+++... . .+.+.+.... .++.+..++... ... ....+.
T Consensus 33 ~l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~-----~g~~~~~f~~v~-~~p---------------~~~~v~ 91 (407)
T 1vlj_A 33 KIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKK-----HGIEWVEVSGVK-PNP---------------VLSKVH 91 (407)
T ss_dssp GHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHH-----TTCEEEEECCCC-SSC---------------BHHHHH
T ss_pred HHHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHH-----cCCeEEEecCcc-CCC---------------CHHHHH
Confidence 4566677777 8899998733 2 2333332211 167766554321 111 122344
Q ss_pred HHHHHHhhccCCCceEEEeCCC-cc--hHHHHHHH------------------cCCceEEEccch
Q 044266 96 ELIENINRLENEKITCVVADGS-MG--WVMEVAEK------------------MKLRRAAFWPAA 139 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~-~~--~~~~~A~~------------------lgiP~v~~~~~~ 139 (462)
+.++.+++ .++|+||.=.. .. .+..+|.. .++|++.+-|..
T Consensus 92 ~~~~~~~~---~~~D~IIavGGGsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 92 EAVEVAKK---EKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp HHHHHHHH---TTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred HHHHHHHh---cCCCEEEEeCChhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 44455555 88999995432 22 45555554 478888876654
No 399
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=25.75 E-value=95 Score=23.20 Aligned_cols=39 Identities=10% Similarity=0.030 Sum_probs=24.1
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc-----CCceEEEcc
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWP 137 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~ 137 (462)
+.++.+.. .+||+||.|...+ .+..+++.+ ++|++.++.
T Consensus 40 ~al~~~~~---~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 40 NAIQIALK---HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHHHHTT---SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHHHhc---CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 33444444 7899999997654 455444433 577777654
No 400
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=25.71 E-value=97 Score=26.46 Aligned_cols=36 Identities=11% Similarity=0.021 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++|.++++.++. -+ -.++|+.|+++|++|.++....
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcCCC
Confidence 457777775554 22 3588999999999999886543
No 401
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=25.69 E-value=1.1e+02 Score=21.54 Aligned_cols=33 Identities=6% Similarity=0.048 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
...|++++..+ ......++.|.+.|++|.++..
T Consensus 56 ~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 56 NEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 35788887544 3466788899999998876654
No 402
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.58 E-value=74 Score=22.97 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=22.0
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+++.+ ++|++.++...
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 6899999997554 344444433 58888876544
No 403
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=25.57 E-value=25 Score=29.50 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=23.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
||+++.. |.+ -..+|+.|.++||+|+++....
T Consensus 2 ~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 6776653 332 3578999999999999998654
No 404
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=25.37 E-value=1.5e+02 Score=23.72 Aligned_cols=34 Identities=29% Similarity=0.304 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++|+++ |+.|.+ -..+++.|.++||+|+.+.-..
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeCh
Confidence 566664 444433 3578899999999999988643
No 405
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=25.30 E-value=88 Score=22.23 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=22.6
Q ss_pred CCceEEEeCCCcc--hHHHHHHH----cCCceEEEccchh
Q 044266 107 EKITCVVADGSMG--WVMEVAEK----MKLRRAAFWPAAA 140 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 140 (462)
.+||+||.|...+ .+..+++. -.+|.+.++....
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 6899999997654 34444433 4688888765543
No 406
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=25.29 E-value=1.4e+02 Score=25.37 Aligned_cols=38 Identities=8% Similarity=0.020 Sum_probs=27.2
Q ss_pred CEEEEEcCC----CccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYP----AQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.||+++..+ ..--..=+....+.|.+.|++|+++++..
T Consensus 24 kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~ 65 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNK 65 (242)
T ss_dssp CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 488877652 22344446666788889999999999864
No 407
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=25.26 E-value=1.1e+02 Score=22.55 Aligned_cols=34 Identities=18% Similarity=0.002 Sum_probs=22.0
Q ss_pred CCceEEEeCCCcc-------hHHHHHHH-----cCCceEEEccchh
Q 044266 107 EKITCVVADGSMG-------WVMEVAEK-----MKLRRAAFWPAAA 140 (462)
Q Consensus 107 ~~~Dlvi~D~~~~-------~~~~~A~~-----lgiP~v~~~~~~~ 140 (462)
.+||+||.|.... .+..+.+. -++|++.++....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 7899999996543 34433333 2688888765543
No 408
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=25.19 E-value=73 Score=29.96 Aligned_cols=40 Identities=23% Similarity=0.335 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|..+.+|+++-.+ .+.+.....|++.+ .+|++||++....
T Consensus 1 M~~m~~vvIIGgG-~aGl~aA~~L~~~~-~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 1 MRGSAHVVILGAG-TGGMPAAYEMKEAL-GSGHEVTLISAND 40 (437)
T ss_dssp CTTSCEEEEECCS-TTHHHHHHHHHHHH-GGGSEEEEECSSS
T ss_pred CCCCCcEEEECCc-HHHHHHHHHHhccC-CCcCEEEEEeCCC
Confidence 5556788887644 44444444444433 2899999998765
No 409
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=25.08 E-value=1.5e+02 Score=26.52 Aligned_cols=108 Identities=11% Similarity=0.071 Sum_probs=54.6
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccc
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGLELT-NRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACF 350 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~ 350 (462)
+.+|..|.++. ..+.++.+. +.+++.++.... .....+.++.+ + ...+-...+++..++++++
T Consensus 8 igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~------~~~~~~~~~~~--~-~~~~~~~~~ll~~~~~D~V 71 (330)
T 3e9m_A 8 YGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRL------ENAQKMAKELA--I-PVAYGSYEELCKDETIDII 71 (330)
T ss_dssp EEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSS------HHHHHHHHHTT--C-CCCBSSHHHHHHCTTCSEE
T ss_pred EEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCH------HHHHHHHHHcC--C-CceeCCHHHHhcCCCCCEE
Confidence 77888887753 345566553 445554444330 00111211111 1 0123345677776666666
Q ss_pred eeccCch----hhhhhhhcCCceec-ccccc--chhhhH-HhHhhhheeeEEee
Q 044266 351 LSHCGWN----STMEGVSNGVPFLC-WPYFA--DQFLNE-SYICDIWKVGLRFN 396 (462)
Q Consensus 351 I~HgG~~----sv~eal~~GvP~l~-~P~~~--DQ~~na-~~v~~~~g~g~~~~ 396 (462)
+----.. .+.+|+.+|+++++ -|+.. ++..-. +..++ .|+-+.+.
T Consensus 72 ~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~-~g~~~~v~ 124 (330)
T 3e9m_A 72 YIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQE-QGVFLMEA 124 (330)
T ss_dssp EECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHH-TTCCEEEC
T ss_pred EEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEE
Confidence 6443333 46788999999876 36543 333322 33333 36655554
No 410
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=24.98 E-value=62 Score=27.60 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.+||.|+-.|..| ..+|+.|+++||+|++.....
T Consensus 19 ~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCCh
Confidence 5689998766555 457899999999999986543
No 411
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=24.96 E-value=64 Score=28.48 Aligned_cols=34 Identities=9% Similarity=0.104 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+++|++. |+.|-+- ..|++.|.++||+|+.++-.
T Consensus 2 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVT--GGTGFLG--QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 3477764 4444332 46789999999999999876
No 412
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=24.95 E-value=1.6e+02 Score=24.50 Aligned_cols=38 Identities=11% Similarity=-0.033 Sum_probs=28.6
Q ss_pred CEEEEEcCC---------CccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYP---------AQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~---------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.||+++... ..-...-+....+.|.++|++|+++++..
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 488877662 33445667778888989999999999764
No 413
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=24.94 E-value=97 Score=25.35 Aligned_cols=36 Identities=17% Similarity=0.091 Sum_probs=27.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.++++..+..|...-+..+++.|+++|+.|..+-..
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 455555677777778889999999999998777643
No 414
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=24.84 E-value=70 Score=28.87 Aligned_cols=82 Identities=11% Similarity=-0.080 Sum_probs=0.0
Q ss_pred CCcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcc
Q 044266 269 QNSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIA 348 (462)
Q Consensus 269 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~ 348 (462)
.+-.|++.-.|-.. +.++.+.+.+++.+..+.+..... .+ -..-+-...+-...++
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~----------~~----------~~~~~~~~~~~~~~d~- 85 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE----------KG----------DAARYVEEARKFGVAT- 85 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS----------TT----------HHHHHHHHHHHHTCSE-
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC----------cc----------hHHHHHHHHHhcCCCE-
Q ss_pred cceeccCchhhhhhh--------hcCCceeccccc
Q 044266 349 CFLSHCGWNSTMEGV--------SNGVPFLCWPYF 375 (462)
Q Consensus 349 ~~I~HgG~~sv~eal--------~~GvP~l~~P~~ 375 (462)
+|.-||=||+.|++ ..++|+.++|..
T Consensus 86 -vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 86 -VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp -EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred -EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
No 415
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=24.79 E-value=40 Score=30.17 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 3 RRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
++.+|+++-.+.-| +..|..|+++|++|+++-...
T Consensus 4 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESSS
T ss_pred CcCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCCC
Confidence 34678887655433 567778888999999998654
No 416
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=24.78 E-value=3.5e+02 Score=23.96 Aligned_cols=76 Identities=11% Similarity=0.062 Sum_probs=50.4
Q ss_pred CEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHHHHHHhhccCCCceEE
Q 044266 33 VKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEELIENINRLENEKITCV 112 (462)
Q Consensus 33 h~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlv 112 (462)
.+..+.+.+.+.-..... |++...+...-+..+ .....+.++++.+++ .+..+|
T Consensus 197 ~~~~v~~H~af~Yfa~~y---------Gl~~~~~~~~~~~~e--------------ps~~~l~~l~~~ik~---~~v~~I 250 (313)
T 1toa_A 197 RRVLVTAHDAFGYFSRAY---------GFEVKGLQGVSTASE--------------ASAHDMQELAAFIAQ---RKLPAI 250 (313)
T ss_dssp GCEEEEEESCCHHHHHHH---------TCEEEEEECSSCSSC--------------CCHHHHHHHHHHHHH---TTCSEE
T ss_pred CCEEEEECCcHHHHHHHC---------CCeEEEeeccCCCCC--------------CCHHHHHHHHHHHHH---cCCCEE
Confidence 455566777788888877 888765432111111 133446666666666 899999
Q ss_pred EeCCCcc--hHHHHH-----HHcCCceEE
Q 044266 113 VADGSMG--WVMEVA-----EKMKLRRAA 134 (462)
Q Consensus 113 i~D~~~~--~~~~~A-----~~lgiP~v~ 134 (462)
+++.... .+-.++ +..|++.+.
T Consensus 251 f~e~~~~~~~~~~la~~~~A~e~gv~v~~ 279 (313)
T 1toa_A 251 FIESSIPHKNVEALRDAVQARGHVVQIGG 279 (313)
T ss_dssp EEETTSCTHHHHHHHHHHHTTTCCCEEEE
T ss_pred EEeCCCChHHHHHHHccchhhhcCCceee
Confidence 9998766 455677 999999854
No 417
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=24.69 E-value=87 Score=26.67 Aligned_cols=35 Identities=3% Similarity=-0.114 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|.++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 22 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 22 SKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 456677755542 23688999999999998887543
No 418
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.68 E-value=1.7e+02 Score=26.41 Aligned_cols=125 Identities=14% Similarity=0.099 Sum_probs=64.3
Q ss_pred cEEEEeccCccccCHHHHHHHHHHHHhC--CCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcc
Q 044266 271 SVIYVAFGSFTVFDKEQFQELASGLELT--NRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIA 348 (462)
Q Consensus 271 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~ 348 (462)
.+.+|..|.++. ..+.++.+. +.+++.++... . .....+.++. ++ ..+-...+++..++++
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~----~--~~~~~~~~~~--~~--~~~~~~~~ll~~~~~D 77 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDID----P--AALKAAVERT--GA--RGHASLTDMLAQTDAD 77 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSS----H--HHHHHHHHHH--CC--EEESCHHHHHHHCCCS
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCC----H--HHHHHHHHHc--CC--ceeCCHHHHhcCCCCC
Confidence 488899998763 344555544 45566555543 0 0011121121 12 3344556777755665
Q ss_pred cceeccC----chhhhhhhhcCCceecc-cccc--chhhh-HHhHhhhheeeEEeecCCCCccCHHHHHHHHHHHhc
Q 044266 349 CFLSHCG----WNSTMEGVSNGVPFLCW-PYFA--DQFLN-ESYICDIWKVGLRFNKNKNGIITREEIMKKVDQVLE 417 (462)
Q Consensus 349 ~~I~HgG----~~sv~eal~~GvP~l~~-P~~~--DQ~~n-a~~v~~~~g~g~~~~~~~~~~~~~~~l~~~i~~ll~ 417 (462)
+++---- ..-+.+++.+|+++++= |+.. ++..- .+..++ .|+-+.+.. ...+.+ ..+.+++++.
T Consensus 78 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~-~g~~~~v~~--~~r~~p--~~~~~k~~i~ 149 (354)
T 3q2i_A 78 IVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK-AKKHLFVVK--QNRRNA--TLQLLKRAMQ 149 (354)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECC--GGGGSH--HHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH-hCCeEEEEE--cccCCH--HHHHHHHHHh
Confidence 5664222 33467789999998873 6543 33332 333344 366555542 233444 2344445544
No 419
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=24.65 E-value=1e+02 Score=22.38 Aligned_cols=33 Identities=12% Similarity=-0.000 Sum_probs=21.5
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-------CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-------KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+++.+ ++|++.++...
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 91 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQG 91 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCC
Confidence 7899999997655 455555543 46666665443
No 420
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.61 E-value=65 Score=27.70 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=30.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|.+..-|+.|-..-...||..|+++|++|.++=.+.
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 4556566677999999999999999999999986554
No 421
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=24.57 E-value=54 Score=29.21 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
++||.++-.|..|. .+|+.|.+.||+|+++...
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 47899987766664 4788899999999887654
No 422
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=24.51 E-value=57 Score=27.63 Aligned_cols=23 Identities=17% Similarity=0.262 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 044266 20 PLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 20 p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
--.++|++|+++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 34678999999999999987654
No 423
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=24.50 E-value=45 Score=30.09 Aligned_cols=35 Identities=17% Similarity=0.008 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+++||+. |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 25 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 25 PKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCS
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCCC
Confidence 4566663 4555543 478899999999999998643
No 424
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=24.49 E-value=64 Score=26.80 Aligned_cols=33 Identities=9% Similarity=0.054 Sum_probs=26.7
Q ss_pred EEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEe
Q 044266 7 VLAFPY-PAQGHVIPLLEISQCLVKHGVKVTFLN 39 (462)
Q Consensus 7 Il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~ 39 (462)
|++... ++-|-..-...||..|+++|++|.++=
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 344443 577999999999999999999999863
No 425
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=24.45 E-value=78 Score=26.90 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|+++++.++.| --.++|+.|+++|++|.++.-.
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45666655543 2357899999999999987654
No 426
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=24.42 E-value=1.2e+02 Score=25.51 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCcc----ChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQG----HVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.+|.+++....+ +..-...|++.|+++|+.|..-..+
T Consensus 9 m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 9 FRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp CSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 4468888655443 3346788888899999988766654
No 427
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=24.30 E-value=2.2e+02 Score=26.19 Aligned_cols=35 Identities=26% Similarity=0.262 Sum_probs=26.3
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcC
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRP 308 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 308 (462)
+++++.||.+ ...-+..+.++|.+.|+++.+.+.+
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 6788888754 3334567899999999999887754
No 428
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=24.27 E-value=74 Score=27.54 Aligned_cols=31 Identities=16% Similarity=0.035 Sum_probs=25.8
Q ss_pred CCceEEEeCCCcc------hHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSMG------WVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~~------~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||+-.... .+..+|..+|+|.+....
T Consensus 115 ~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 115 EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 6799999876552 688999999999998754
No 429
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=24.25 E-value=75 Score=25.35 Aligned_cols=41 Identities=15% Similarity=0.082 Sum_probs=26.0
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHH-----cCCceEEEccch
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEK-----MKLRRAAFWPAA 139 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 139 (462)
+.++.+.. .+||+||.|...+ .+..+++. -++|++.++...
T Consensus 42 ~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 42 EALKLAGA---EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHTT---SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHhh---CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 34444444 8899999997655 34444433 258888776544
No 430
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=24.24 E-value=96 Score=26.37 Aligned_cols=30 Identities=13% Similarity=-0.054 Sum_probs=23.2
Q ss_pred CCceEEEeCCCcc-------hHHHHHHHcCCceEEEc
Q 044266 107 EKITCVVADGSMG-------WVMEVAEKMKLRRAAFW 136 (462)
Q Consensus 107 ~~~Dlvi~D~~~~-------~~~~~A~~lgiP~v~~~ 136 (462)
.+||++++|.... .+..+.-.+|+|+|.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 6899999998654 35566777789999864
No 431
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=24.16 E-value=31 Score=33.20 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=22.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
||+++-.|-.| |.-|..|+++||+|+++=-
T Consensus 3 ~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 3 PTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 67777655434 6668889999999999854
No 432
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=24.12 E-value=1.3e+02 Score=21.43 Aligned_cols=33 Identities=6% Similarity=-0.018 Sum_probs=22.0
Q ss_pred CCceEEEeCCCcc--hHHHHHHH-----cCCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEK-----MKLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 139 (462)
.+||++|.|...+ .+..+.+. -.+|++.++...
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 7899999997654 34444433 257888776544
No 433
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=24.11 E-value=79 Score=27.74 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+||.++-.|..|. .+++.|.+.||+|+++...
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 5899988777664 4678888999999877553
No 434
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=24.09 E-value=99 Score=26.78 Aligned_cols=35 Identities=14% Similarity=-0.030 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|+++++.++.| =-.++|+.|+++|++|.++.-..
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~~ 64 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADLAA 64 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCCh
Confidence 477888876654 34678999999999998876543
No 435
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.07 E-value=81 Score=27.24 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.|+++++.++.| --.++|+.|+++|++|.+....
T Consensus 26 ~~k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~~ 60 (267)
T 3u5t_A 26 TNKVAIVTGASRG---IGAAIAARLASDGFTVVINYAG 60 (267)
T ss_dssp -CCEEEEESCSSH---HHHHHHHHHHHHTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3467778766543 2457899999999999987543
No 436
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=24.02 E-value=56 Score=29.36 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=23.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKH--GVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~ 41 (462)
|..+++|++. |+.|.+ -..|++.|.++ ||+|+.+.-.
T Consensus 1 Ms~m~~vlVT--GatG~i--G~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 1 MSQFKNIIVT--GGAGFI--GSNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp --CCSEEEEE--TTTSHH--HHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCcCcEEEEe--CCccHH--HHHHHHHHHHhCCCCEEEEEeCC
Confidence 5444566653 444443 34678889888 8999998754
No 437
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.01 E-value=96 Score=26.24 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.|.++++.++.| --.++|+.|+++|++|+++.-.
T Consensus 5 ~k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 5 DKAVLITGAAHG---IGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356667755442 2456889999999999988654
No 438
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=23.94 E-value=73 Score=29.35 Aligned_cols=38 Identities=3% Similarity=-0.044 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCccC----hHHHHHHHHHH-HhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGH----VIPLLEISQCL-VKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH----~~p~l~La~~L-~~rGh~Vt~~~~~ 41 (462)
++||+++..+-.+- +.....++++| .++||+|+.+...
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 57898887554442 33568889999 9999999999754
No 439
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=23.92 E-value=1.2e+02 Score=25.27 Aligned_cols=47 Identities=19% Similarity=0.178 Sum_probs=32.3
Q ss_pred cHHHHHHHHHHhhcc-CCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 91 PEKLEELIENINRLE-NEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 91 ~~~~~~l~~~l~~~~-~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
...++++++.+.... +.+.-+||+|.-...+...|+++|||+..+.+
T Consensus 18 gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 18 GSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp CHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred cHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 345667777765511 13567789986555677889999999998643
No 440
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=23.83 E-value=91 Score=26.26 Aligned_cols=34 Identities=6% Similarity=-0.190 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.|.++++.++.| --.++|+.|+++|++|+++.-.
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 355666654442 3457899999999999988754
No 441
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=23.72 E-value=1.5e+02 Score=23.64 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC--CEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHG--VKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~ 41 (462)
+.+|.++. ++.|++--+-..++.|.+-| |+|.+++..
T Consensus 6 ~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaH 44 (169)
T 3trh_A 6 KIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAH 44 (169)
T ss_dssp CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEccc
Confidence 34666655 78888888888888887766 555554443
No 442
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=23.71 E-value=1.1e+02 Score=26.40 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=28.6
Q ss_pred CEEEEEcCCCc-cChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHH
Q 044266 5 PHVLAFPYPAQ-GHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVN 49 (462)
Q Consensus 5 ~~Il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~ 49 (462)
.|+++++.++. +-+ -.++|+.|+++|++|.++......+.+++
T Consensus 26 ~k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 69 (280)
T 3nrc_A 26 GKKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQFKDRVEK 69 (280)
T ss_dssp TCEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTTCHHHHHH
T ss_pred CCEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCchHHHHHHH
Confidence 36777776431 112 36789999999999999887654344333
No 443
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=23.68 E-value=38 Score=25.60 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+.+|+++.. |.+- ..+++.|.+.|++|+++...
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 346777654 4332 45789999999999988764
No 444
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.65 E-value=97 Score=26.91 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 61 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVNE 61 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 467778766553 34578999999999999887543
No 445
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=23.64 E-value=61 Score=31.15 Aligned_cols=26 Identities=19% Similarity=0.104 Sum_probs=21.8
Q ss_pred CCceEEEeCCCcchHHHHHHHcCCceEEE
Q 044266 107 EKITCVVADGSMGWVMEVAEKMKLRRAAF 135 (462)
Q Consensus 107 ~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~ 135 (462)
.+||++|... ....+|+++|||++.+
T Consensus 400 ~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 400 YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 8999999873 4667899999999864
No 446
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=23.64 E-value=1e+02 Score=26.54 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.|.++++.++.| --.++|+.|+++|++|.++...
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777766543 3468899999999999988764
No 447
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=23.61 E-value=1.1e+02 Score=26.52 Aligned_cols=34 Identities=9% Similarity=0.017 Sum_probs=27.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
-|+++++.++.| ==.++|+.|+++|++|.+..-.
T Consensus 11 GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 11 GKRALITAGTKG---AGAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp TCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEECC
Confidence 489999977765 2367899999999999887653
No 448
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=23.61 E-value=54 Score=28.22 Aligned_cols=30 Identities=17% Similarity=0.136 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
||.|+-.|..|. .+|+.|++.||+|++...
T Consensus 2 ~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQ-----TLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHH-----HHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHH-----HHHHHHHHCCCeEEEeCC
Confidence 788887666664 578999999999998533
No 449
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=23.51 E-value=1.2e+02 Score=30.01 Aligned_cols=25 Identities=12% Similarity=0.286 Sum_probs=21.2
Q ss_pred cceeccCch------hhhhhhhcCCceeccc
Q 044266 349 CFLSHCGWN------STMEGVSNGVPFLCWP 373 (462)
Q Consensus 349 ~~I~HgG~~------sv~eal~~GvP~l~~P 373 (462)
++++|.|-| .+.||-+.++|+|++-
T Consensus 78 v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 78 ICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp EEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 389999954 7889999999999983
No 450
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=23.45 E-value=1e+02 Score=25.96 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.|+++++.++.| + -.++|+.|+++|++|.++....
T Consensus 4 ~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 4 NEKVALVTGASRG-I--GFEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp TTCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCCH
Confidence 4467777755542 2 3578999999999998887654
No 451
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=23.33 E-value=2.8e+02 Score=22.06 Aligned_cols=140 Identities=11% Similarity=0.113 Sum_probs=76.5
Q ss_pred CcEEEEeccCccccCHHHHHHHHHHHHhCCCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCccc
Q 044266 270 NSVIYVAFGSFTVFDKEQFQELASGLELTNRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIAC 349 (462)
Q Consensus 270 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~ 349 (462)
+|.|-|-.||.+ +....++....++..|.++-+.+.+. .-.|+.+.+. +-.. --...++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~~----------~~~a-~~~g~~V-- 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA------HRTPKETVEF----------VENA-DNRGCAV-- 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHHH-HHTTEEE--
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHHH----------HHHH-HhCCCcE--
Confidence 456777788754 66778888888888888876555432 2233332211 1000 0011223
Q ss_pred ceeccCch----hhhhhhhcCCceeccccccchh---h--hH-HhHhhhheee--EEeecCCCCccCHHHHHHHHHHHhc
Q 044266 350 FLSHCGWN----STMEGVSNGVPFLCWPYFADQF---L--NE-SYICDIWKVG--LRFNKNKNGIITREEIMKKVDQVLE 417 (462)
Q Consensus 350 ~I~HgG~~----sv~eal~~GvP~l~~P~~~DQ~---~--na-~~v~~~~g~g--~~~~~~~~~~~~~~~l~~~i~~ll~ 417 (462)
+|.=+|.. ++..++ .-+|+|.+|...-.. + ++ -++- . |+. ... .++.+.+++.-++..|..+ .
T Consensus 65 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp-~-GvPVatV~-I~~a~~~nAa~lAa~Il~~-~ 139 (169)
T 3trh_A 65 FIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMP-G-GVPVACTA-IGKAGAKNAAILAAQIIAL-Q 139 (169)
T ss_dssp EEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCC-T-TSCCEECC-STHHHHHHHHHHHHHHHHT-T
T ss_pred EEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCC-C-CCceEEEe-cCCccchHHHHHHHHHHcC-C
Confidence 77766644 333333 358999999753211 1 11 1111 1 543 222 1101334666666666544 5
Q ss_pred CHHHHHHHHHHHHHHHhH
Q 044266 418 DENFKARALDLKETSLNS 435 (462)
Q Consensus 418 ~~~~~~~a~~l~~~~~~~ 435 (462)
|++++++.+..+++.++.
T Consensus 140 d~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 140 DKSIAQKLVQQRTAKRET 157 (169)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999988874
No 452
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.33 E-value=70 Score=26.42 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
||++. |+.|-+- ..+++.|.++||+|+.+.-..
T Consensus 2 ~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 66654 3444333 578999999999999998654
No 453
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=23.31 E-value=99 Score=26.89 Aligned_cols=38 Identities=21% Similarity=0.191 Sum_probs=27.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|.-+.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 1 M~l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 1 MKLTGEVALITGGASG---LGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp CTTTTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 4334577778766553 2357899999999999988754
No 454
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=23.29 E-value=69 Score=26.36 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=22.8
Q ss_pred EEEEEc-CCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 6 HVLAFP-YPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 6 ~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
||+++- .+..| ..+++.|.++||+|+++...
T Consensus 2 ~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 787774 44334 35788999999999988754
No 455
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=23.27 E-value=58 Score=28.21 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=25.3
Q ss_pred EEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 9 AFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 9 ~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
++..|..|+-.-+..+++.|+++|++|..+--+
T Consensus 55 lllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~ 87 (281)
T 4fbl_A 55 LVSHGFTGSPQSMRFLAEGFARAGYTVATPRLT 87 (281)
T ss_dssp EEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 344677777777888999999999998766543
No 456
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=23.24 E-value=1.8e+02 Score=23.33 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=27.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.||+++-.++. ...-+....+.|.+.|++|++++...
T Consensus 6 kkv~ill~~g~-~~~e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 6 KSALVILAPGA-EEMEFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp CEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cEEEEEECCCc-hHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 47887776554 34455666788889999999999864
No 457
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=23.21 E-value=65 Score=26.95 Aligned_cols=34 Identities=9% Similarity=0.079 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 2 k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~~ 35 (230)
T 3guy_A 2 SLIVITGASSG---LGAELAKLYDAEGKATYLTGRSE 35 (230)
T ss_dssp -CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 56677755542 23678999999999998887543
No 458
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=23.18 E-value=2.8e+02 Score=25.18 Aligned_cols=91 Identities=18% Similarity=0.203 Sum_probs=52.0
Q ss_pred HHHHHHHhCCCEEEEEeCCcch----HHHHHhhcCCCCCCCCeEEE-EcCCCCCCCCCCCCHHHHHHHHHHhccHHHHHH
Q 044266 23 EISQCLVKHGVKVTFLNTDYNH----KRVVNALGQNNYIGDQIKLV-SIPDGMEPEGDRNDLGMLTKTMVRVMPEKLEEL 97 (462)
Q Consensus 23 ~La~~L~~rGh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~i~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (462)
.|.+.|.+.|.+|.+++.+... +.+.+.... .++.+. .+.++ +.. ...+.++
T Consensus 22 ~l~~~l~~~g~~~livtd~~~~~~~~~~v~~~L~~-----~g~~~~~~~~~g----e~~--------------~~~v~~~ 78 (370)
T 1jq5_A 22 KIANYLEGIGNKTVVIADEIVWKIAGHTIVNELKK-----GNIAAEEVVFSG----EAS--------------RNEVERI 78 (370)
T ss_dssp GHHHHHTTTCSEEEEEECHHHHHHTHHHHHHHHHT-----TTCEEEEEECCS----SCB--------------HHHHHHH
T ss_pred HHHHHHHHcCCeEEEEEChHHHHHHHHHHHHHHHH-----cCCeEEEEeeCC----CCC--------------HHHHHHH
Confidence 4566676678889988876532 233332211 155542 23332 111 1223344
Q ss_pred HHHHhhccCCCceEEEeCCC-cc--hHHHHHHHcCCceEEEccch
Q 044266 98 IENINRLENEKITCVVADGS-MG--WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 98 ~~~l~~~~~~~~Dlvi~D~~-~~--~~~~~A~~lgiP~v~~~~~~ 139 (462)
++.+++ .++|+||.=.. .. .+..+|...|+|++.+-|..
T Consensus 79 ~~~~~~---~~~d~IIavGGGsv~D~aK~iA~~~~~p~i~IPTTa 120 (370)
T 1jq5_A 79 ANIARK---AEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAA 120 (370)
T ss_dssp HHHHHH---TTCSEEEEEESHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred HHHHHh---cCCCEEEEeCChHHHHHHHHHHHhcCCCEEEecccc
Confidence 444444 78999995433 22 66777888899999987653
No 459
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=23.10 E-value=80 Score=27.47 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 24 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 58 (279)
T 3sju_A 24 PQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARDA 58 (279)
T ss_dssp -CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 367777766553 34678999999999998877543
No 460
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=23.08 E-value=87 Score=25.73 Aligned_cols=36 Identities=11% Similarity=-0.004 Sum_probs=27.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.+.+++..+..|+..-+..+++.|.++|+.|..+-.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 345556667778888888999999999998876644
No 461
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=23.06 E-value=1.9e+02 Score=21.15 Aligned_cols=53 Identities=8% Similarity=-0.054 Sum_probs=30.5
Q ss_pred cCCceeccccccchhhhHHhHhhhhee-eEEeecCCCCccCHHHHHHHHHHHhcCHHHHH
Q 044266 365 NGVPFLCWPYFADQFLNESYICDIWKV-GLRFNKNKNGIITREEIMKKVDQVLEDENFKA 423 (462)
Q Consensus 365 ~GvP~l~~P~~~DQ~~na~~v~~~~g~-g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~ 423 (462)
..+|+|++--..|.......+.. .|+ +... +.++.++|..+|++++.....++
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~-----KP~~~~~L~~~i~~~~~~~~~~~ 124 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLT-----KPWHPEQLLSSARNAARMFTLAR 124 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEE-----SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhcc-----CCCCHHHHHHHHHHHHHHHHHHH
Confidence 45677766444443333333333 144 3433 55899999999999985433333
No 462
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=23.05 E-value=1.1e+02 Score=28.24 Aligned_cols=40 Identities=18% Similarity=0.070 Sum_probs=30.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
|+++.||+++...+.. ..-+....+.|.++|++|+++++.
T Consensus 9 m~~~~kv~ill~dg~e-~~E~~~~~~~l~~ag~~v~~vs~~ 48 (396)
T 3uk7_A 9 MANSRTVLILCGDYME-DYEVMVPFQALQAFGITVHTVCPG 48 (396)
T ss_dssp --CCCEEEEECCTTEE-HHHHHHHHHHHHHTTCEEEEECTT
T ss_pred hhcCCeEEEEeCCCcc-HHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3445689888876655 455677788899999999999985
No 463
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=23.05 E-value=37 Score=30.26 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
++||.|+-.+..|. .+|+.|+++||+|++....
T Consensus 9 ~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 46899987766664 6889999999999988543
No 464
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.01 E-value=1e+02 Score=25.41 Aligned_cols=35 Identities=11% Similarity=0.233 Sum_probs=23.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHH-hCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLV-KHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~~~~ 42 (462)
+|.++++ |+.|-+ -..+++.|+ ++||+|+.+.-..
T Consensus 5 mk~vlVt-Gasg~i--G~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITIL-GAAGQI--AQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSEEEEE-STTSHH--HHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEE-eCCcHH--HHHHHHHHHhcCCceEEEEecCc
Confidence 4534444 333333 367899999 8999999987653
No 465
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=22.96 E-value=1.1e+02 Score=26.32 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+-|+++++..+.+ --=-.++|+.|+++|++|.+..-..
T Consensus 5 ~gK~alVTGaa~~-~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 5 ENKTYVIMGIANK-RSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp TTCEEEEECCCST-TCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHHCCCEEEEEECCH
Confidence 4578888864321 0023788999999999999887643
No 466
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.91 E-value=1e+02 Score=26.06 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 8 ~~k~vlITGas~g---iG~~~a~~l~~~G~~V~~~~r~~ 43 (253)
T 3qiv_A 8 ENKVGIVTGSGGG---IGQAYAEALAREGAAVVVADINA 43 (253)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCCH
Confidence 3467777755542 24688999999999998887543
No 467
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=22.88 E-value=1.8e+02 Score=26.60 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=30.0
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 7 VLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 7 Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
++++..++.|=..=++.++..+...|..|.|+.+...
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 4466667778888889999999999999999988764
No 468
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=22.79 E-value=72 Score=27.92 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=24.8
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPY-PAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
+||.++-. |..| ..+|+.|.++||+|+++...
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 58999876 6555 45788899999999977643
No 469
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=22.73 E-value=97 Score=22.86 Aligned_cols=34 Identities=12% Similarity=-0.040 Sum_probs=22.5
Q ss_pred CCceEEEeCCCcc---hHHHHHHH----cCCceEEEccchh
Q 044266 107 EKITCVVADGSMG---WVMEVAEK----MKLRRAAFWPAAA 140 (462)
Q Consensus 107 ~~~Dlvi~D~~~~---~~~~~A~~----lgiP~v~~~~~~~ 140 (462)
.+||+||.|...+ .+..+.+. .++|++.++....
T Consensus 53 ~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 53 LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 6899999996543 34444333 4789988766543
No 470
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.66 E-value=44 Score=28.35 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=22.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.|+++-.|--| +.+|..|+++|++|+++=-
T Consensus 4 dV~IIGaGpaG-----L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAG-----LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCCEEEEEC
Confidence 46666555434 7889999999999999853
No 471
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=22.62 E-value=1e+02 Score=26.17 Aligned_cols=32 Identities=9% Similarity=0.033 Sum_probs=22.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 6 HVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 6 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
|+++++.++. - --.++|+.|+++|++|+++.-
T Consensus 2 k~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 4566664443 2 245789999999999998764
No 472
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=22.62 E-value=91 Score=22.37 Aligned_cols=32 Identities=16% Similarity=0.083 Sum_probs=20.1
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-------CCceEEEccc
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-------KLRRAAFWPA 138 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-------giP~v~~~~~ 138 (462)
.+||+||.|...+ .+..+++.+ .+|++.++..
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 44 NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 6899999997654 344444432 5788776543
No 473
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.61 E-value=1e+02 Score=22.90 Aligned_cols=33 Identities=9% Similarity=-0.074 Sum_probs=21.7
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+++.+ .+|++.++...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 47 SKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 6899999997654 344444433 57777766544
No 474
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=22.52 E-value=2.1e+02 Score=22.87 Aligned_cols=38 Identities=8% Similarity=0.061 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+.||+++.+++.. ..-+....+.|.+.|++|++++...
T Consensus 9 ~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 9 GKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp TCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4689988765544 4456667788888999999999764
No 475
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=22.52 E-value=86 Score=26.74 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCh--HHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 5 PHVLAFPYPAQGHV--IPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 5 ~~Il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.-++++..++.+|- ..+..+|+.|+++|+.|..+-.+..
T Consensus 56 ~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~ 96 (259)
T 4ao6_A 56 DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGH 96 (259)
T ss_dssp SEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-
T ss_pred CCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCC
Confidence 35677777777774 3477899999999999988766543
No 476
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.50 E-value=1.7e+02 Score=22.02 Aligned_cols=64 Identities=14% Similarity=-0.001 Sum_probs=35.8
Q ss_pred hcCCceeccccccchhhhHHhHhhhhe-eeEEeecCCCCccCHHHHHHHHHHHhcCHHH-HHHHHHHHHHHH
Q 044266 364 SNGVPFLCWPYFADQFLNESYICDIWK-VGLRFNKNKNGIITREEIMKKVDQVLEDENF-KARALDLKETSL 433 (462)
Q Consensus 364 ~~GvP~l~~P~~~DQ~~na~~v~~~~g-~g~~~~~~~~~~~~~~~l~~~i~~ll~~~~~-~~~a~~l~~~~~ 433 (462)
...+|+|++--..|.......+. .| +--.+. +.++.++|.++|++++....+ ++..+.+++.+.
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~~--~g~~~~~l~----KP~~~~~L~~~i~~~l~~~~~~~~~~~~~~~~~~ 139 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAVN--EGQVFRFLN----KPCQMSDIKAAINAGIKQYDLVTSKEELLKKTFA 139 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHHH--HTCCSEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCcEEEEEECCCCHHHHHHHHH--cCCeeEEEc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34677777654444433333333 36 433332 568999999999999975544 333333443333
No 477
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=22.45 E-value=49 Score=28.30 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=24.9
Q ss_pred CCceEEE-eCCCcc-hHHHHHHHcCCceEEEccch
Q 044266 107 EKITCVV-ADGSMG-WVMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 139 (462)
..||+|| +|+..- .++.=|.++|||+|.++-+.
T Consensus 113 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 147 (241)
T 2xzm_B 113 EEPRVLIVTDPRSDFQAIKEASYVNIPVIALCDSD 147 (241)
T ss_dssp CCCSEEEESCTTTTHHHHHHHTTTTCCEEECCCSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHhCCCEEEEecCC
Confidence 6788876 565444 67788999999999976544
No 478
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=22.45 E-value=25 Score=32.97 Aligned_cols=108 Identities=12% Similarity=0.009 Sum_probs=62.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcchHHHHHhhcCCCCCCCCeEEEEcCC--CCCCCCCCCCHHHH
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYNHKRVVNALGQNNYIGDQIKLVSIPD--GMEPEGDRNDLGML 82 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~i~~~~i~~--~~~~~~~~~~~~~~ 82 (462)
+|..+++ .++-.-+..+|+.|.+.|.+ ++++......+++. |+.+..+.+ ++|+-
T Consensus 13 ~~~aliS---V~DK~gl~~~A~~L~~~G~e--iisTgGTak~L~~~---------Gi~v~~Vs~~TgfPEi--------- 69 (464)
T 1zcz_A 13 MKRILVS---LYEKEKYLDILRELHEKGWE--IWASSGTAKFLKSN---------GIEANDVSTITGFENL--------- 69 (464)
T ss_dssp CCEEEEE---CSSTGGGHHHHHHHHHTTCE--EEECHHHHHHHHHT---------TCCCEEGGGGSCCCCG---------
T ss_pred ccEEEEE---ecCccCHHHHHHHHHHCCCE--EEECchHHHHHHHC---------CCceEEHHhhcCCchh---------
Confidence 3444444 35555689999999998876 46888888999988 888888763 33332
Q ss_pred HHHHHHhccHHHHHHHHHHhhccCCCceEEEeCCCc-----ch--HHHHHHHcCCceEEEccch
Q 044266 83 TKTMVRVMPEKLEELIENINRLENEKITCVVADGSM-----GW--VMEVAEKMKLRRAAFWPAA 139 (462)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~~~~~~~Dlvi~D~~~-----~~--~~~~A~~lgiP~v~~~~~~ 139 (462)
++-=.+...|.+-.-+-. ++ .+.|+||++.+- .. ++.=|...|-..|.+.+.+
T Consensus 70 ldGRVKTLHP~ihggiLa-~r---~~IDlVVvNLYPiEnIDIGGpsmiRaAAKN~~~V~vv~dp 129 (464)
T 1zcz_A 70 LGGLVKTLHPEIFAGILG-PE---PRWDVVFVDLYPPPDIDIGGVALLRAAAKNWKKVKPAFDM 129 (464)
T ss_dssp GGGTTTTCCHHHHHHHHS-SS---CSCSEEEECCCCTTCCCSHHHHHHHHHHHTTTTCEEECSH
T ss_pred hcCcccccChhheeeeee-cC---CCccEEEEcCCchhhhccccHHHHHHHHHcCCCEEEECCH
Confidence 111123344444432222 11 588999998322 11 2222444466655555544
No 479
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=22.40 E-value=87 Score=27.43 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|+++++.++.| =-.++|+.|+++|++|.++.-..
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 467788866643 23578999999999999887654
No 480
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=22.38 E-value=88 Score=28.03 Aligned_cols=34 Identities=12% Similarity=0.037 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
+.|+++++.++.| --.++|+.|+++|++|....-
T Consensus 4 ~~k~vlVTGas~G---IG~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 4 SKKIILITGASSG---FGRLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEecC
Confidence 3467788866553 235789999999999987653
No 481
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=22.36 E-value=78 Score=27.62 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=21.1
Q ss_pred CCceEEEeCCCcc--hHHHHHHHcCCceEEEc
Q 044266 107 EKITCVVADGSMG--WVMEVAEKMKLRRAAFW 136 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~lgiP~v~~~ 136 (462)
.+||+||...... .....-++.|||++.+.
T Consensus 58 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 58 LRPDILIGTEEMGPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp TCCSEEEECTTCCCHHHHHHHHHTTCCEEECC
T ss_pred cCCCEEEEeCccCcHHHHHHHHHcCCcEEEec
Confidence 7999999875432 33444567899998863
No 482
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=22.24 E-value=90 Score=27.82 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+|+|++. |+.|.+ -..|++.|.++||+|+.+.-..
T Consensus 13 ~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 13 HVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp CCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecCh
Confidence 3577664 444444 3567899999999999987643
No 483
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=22.23 E-value=1.1e+02 Score=26.96 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCCccChHHH--HHHHHHHHhCC-CEEEEEeCC
Q 044266 3 RRPHVLAFPYPAQGHVIPL--LEISQCLVKHG-VKVTFLNTD 41 (462)
Q Consensus 3 ~~~~Il~~~~~~~GH~~p~--l~La~~L~~rG-h~Vt~~~~~ 41 (462)
++.|||+++ +..+|-.+. -.|++.|.+.| .+|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 567999995 444886443 57788888888 999999875
No 484
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=22.23 E-value=51 Score=30.63 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCE-EEEEeCC
Q 044266 1 MLRRPHVLAFPYPAQGHVIPLLEISQCLVKHGVK-VTFLNTD 41 (462)
Q Consensus 1 ~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~-Vt~~~~~ 41 (462)
|+.+.+|+++-.|..| +.+|..|+++|++ |+++--.
T Consensus 1 M~~~~dVvIVGaG~aG-----l~~A~~L~~~G~~~v~v~E~~ 37 (410)
T 3c96_A 1 MSEPIDILIAGAGIGG-----LSCALALHQAGIGKVTLLESS 37 (410)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCSEEEEEESS
T ss_pred CCCCCeEEEECCCHHH-----HHHHHHHHhCCCCeEEEEECC
Confidence 6667789888766545 6788899999999 9999654
No 485
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=22.13 E-value=1.3e+02 Score=25.91 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 26 ~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 26 TPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp SCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 467777755542 2468899999999999887543
No 486
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=22.10 E-value=1.3e+02 Score=21.74 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=25.5
Q ss_pred HHHHHHhhccCCCceEEEeCCCcc--hHHHHHHHc-------CCceEEEccch
Q 044266 96 ELIENINRLENEKITCVVADGSMG--WVMEVAEKM-------KLRRAAFWPAA 139 (462)
Q Consensus 96 ~l~~~l~~~~~~~~Dlvi~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 139 (462)
+.++.+.. .+||+||.|...+ .+..+++.+ .+|++.++...
T Consensus 40 ~a~~~~~~---~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 40 DALNKLQA---GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp HHHHHHTT---CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred HHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 44444444 7899999997655 455454443 46777765543
No 487
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.06 E-value=1.1e+02 Score=26.55 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 467788866653 3467899999999999988653
No 488
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=22.06 E-value=67 Score=28.46 Aligned_cols=35 Identities=3% Similarity=0.032 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+++|+++ |+.|.+- ..+++.|.++||+|++++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 3456653 4555553 367899999999999988654
No 489
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=21.99 E-value=1.4e+02 Score=22.44 Aligned_cols=33 Identities=18% Similarity=0.075 Sum_probs=21.8
Q ss_pred CCceEEEeCCCcc--hHHHHHHHc-----CCceEEEccch
Q 044266 107 EKITCVVADGSMG--WVMEVAEKM-----KLRRAAFWPAA 139 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 139 (462)
.+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 7899999997554 344443332 68888876544
No 490
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.99 E-value=1.3e+02 Score=25.02 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=31.4
Q ss_pred HHHHHHHHHhhcc-CCCceEEEeCCCcchHHHHHHHcCCceEEEcc
Q 044266 93 KLEELIENINRLE-NEKITCVVADGSMGWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 93 ~~~~l~~~l~~~~-~~~~Dlvi~D~~~~~~~~~A~~lgiP~v~~~~ 137 (462)
.++.+++.++... +.+.-+||++.-...+...|++.|||+..+.+
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECc
Confidence 3556666554411 14556788998777788889999999987654
No 491
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.94 E-value=51 Score=29.09 Aligned_cols=32 Identities=6% Similarity=-0.010 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 478887766555 67888899999999999865
No 492
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=21.89 E-value=1.4e+02 Score=26.65 Aligned_cols=106 Identities=11% Similarity=0.036 Sum_probs=55.6
Q ss_pred EEEEeccCccccCHHHHHHHHHHHHhC-CCCEEEEEcCCCCCcccccCchhHHHHhcCCceeecccCcccccCCCCcccc
Q 044266 272 VIYVAFGSFTVFDKEQFQELASGLELT-NRPFLWVVRPDITNDAIDAYPEGFQDRVATRRQMVGWAPQQKVLTHPSIACF 350 (462)
Q Consensus 272 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~ll~~~~~~~~ 350 (462)
+.+|..|.++. ..+.++.+. +.+++.++... . .....+.++. ++. +-...+++..++++++
T Consensus 6 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~----~--~~~~~~~~~~--~~~---~~~~~~~l~~~~~D~V 67 (331)
T 4hkt_A 6 FGLLGAGRIGK-------VHAKAVSGNADARLVAVADAF----P--AAAEAIAGAY--GCE---VRTIDAIEAAADIDAV 67 (331)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS----H--HHHHHHHHHT--TCE---ECCHHHHHHCTTCCEE
T ss_pred EEEECCCHHHH-------HHHHHHhhCCCcEEEEEECCC----H--HHHHHHHHHh--CCC---cCCHHHHhcCCCCCEE
Confidence 67788887653 344555443 55555555433 0 0011111111 222 4455678876666667
Q ss_pred eecc----CchhhhhhhhcCCceec-ccccc--chhhhH-HhHhhhheeeEEee
Q 044266 351 LSHC----GWNSTMEGVSNGVPFLC-WPYFA--DQFLNE-SYICDIWKVGLRFN 396 (462)
Q Consensus 351 I~Hg----G~~sv~eal~~GvP~l~-~P~~~--DQ~~na-~~v~~~~g~g~~~~ 396 (462)
+--- -..-+.+++.+|+++++ -|+.. ++..-. ..+++ .|+-+.+.
T Consensus 68 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~ 120 (331)
T 4hkt_A 68 VICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSD-TKAKLMVG 120 (331)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH-TTCCEEEC
T ss_pred EEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH-cCCeEEEc
Confidence 6422 23457788999999877 36543 333322 33344 47666664
No 493
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.87 E-value=1.4e+02 Score=21.71 Aligned_cols=21 Identities=19% Similarity=0.001 Sum_probs=14.7
Q ss_pred CCceEEEeCCCcc--hHHHHHHH
Q 044266 107 EKITCVVADGSMG--WVMEVAEK 127 (462)
Q Consensus 107 ~~~Dlvi~D~~~~--~~~~~A~~ 127 (462)
.+||+||.|...+ .+..+.+.
T Consensus 49 ~~~dlii~d~~l~~~~g~~~~~~ 71 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLDGLDVIRS 71 (132)
T ss_dssp TCCSEEEEESCBTTBCHHHHHHH
T ss_pred cCCCEEEEecCCCCCCHHHHHHH
Confidence 8999999997655 34444443
No 494
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=21.86 E-value=88 Score=27.61 Aligned_cols=39 Identities=15% Similarity=0.172 Sum_probs=31.1
Q ss_pred CCEEE-EEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 4 RPHVL-AFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 4 ~~~Il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
+++++ +..-|+.|=..-...||..|+++|++|.++=.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 44554 5555667888999999999999999999997654
No 495
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=21.81 E-value=1.5e+02 Score=24.60 Aligned_cols=36 Identities=19% Similarity=0.140 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCcc
Q 044266 4 RPHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDYN 43 (462)
Q Consensus 4 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 43 (462)
.++|++. |+.|.+ -..+++.|+++||+|+.+.-...
T Consensus 21 ~~~ilVt--GatG~i--G~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVV--GANGKV--ARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEE--CCCChH--HHHHHHHHHhCCCeEEEEECChH
Confidence 4566553 344433 24788999999999999986543
No 496
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=21.74 E-value=1.6e+02 Score=18.47 Aligned_cols=34 Identities=9% Similarity=0.206 Sum_probs=29.7
Q ss_pred CccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 044266 401 GIITREEIMKKVDQVLEDENFKARALDLKETSLN 434 (462)
Q Consensus 401 ~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 434 (462)
-..|.+++.+-...--.||.++.+-+.++..+..
T Consensus 5 lkMskqEvK~E~Ke~EGdP~iK~r~R~~~re~a~ 38 (54)
T 3bzy_A 5 ASMSKDEVKREAKDTDGNPEIKGERRRLHSEIQS 38 (54)
T ss_pred cCCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 3579999999999999999999998888888765
No 497
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=21.68 E-value=1e+02 Score=26.31 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCCc
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNTDY 42 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 42 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-..
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 40 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGRTK 40 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 367777766553 34678999999999998876543
No 498
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=21.65 E-value=79 Score=26.79 Aligned_cols=31 Identities=10% Similarity=-0.106 Sum_probs=20.8
Q ss_pred CCceEEEeCCCc--chHHHHHHHcCCceEEEcc
Q 044266 107 EKITCVVADGSM--GWVMEVAEKMKLRRAAFWP 137 (462)
Q Consensus 107 ~~~Dlvi~D~~~--~~~~~~A~~lgiP~v~~~~ 137 (462)
.+||+||..... .....--++.|||++.+..
T Consensus 56 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 56 LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 699999985322 2334445678999997653
No 499
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=21.65 E-value=1.3e+02 Score=25.13 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=26.7
Q ss_pred EEEEEcCCCccC--hHHHHHHHHHHHhCCCEEEEEeCC
Q 044266 6 HVLAFPYPAQGH--VIPLLEISQCLVKHGVKVTFLNTD 41 (462)
Q Consensus 6 ~Il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~~ 41 (462)
..+++..|..|+ ..-+..+++.|.++|++|..+--+
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCC
Confidence 345555677777 666778999999999998776544
No 500
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.64 E-value=98 Score=26.94 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 044266 5 PHVLAFPYPAQGHVIPLLEISQCLVKHGVKVTFLNT 40 (462)
Q Consensus 5 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 40 (462)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777766553 335789999999999988765
Done!