BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044269
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B8GA36|OBG_CHLAD GTPase obg OS=Chloroflexus aggregans (strain MD-66 / DSM 9485)
GN=obg PE=3 SV=1
Length = 439
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 43 NTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMV 102
+ + V G ++R + M+N ++ R Q LEA G+ ++LM GV++GD V +G E+V
Sbjct: 371 DAFRVRGVKIERLIAMSNLEQDEAIDRIQRVLEASGINEALMAAGVQDGDVVRIGRAELV 430
Query: 103 WHDSANN 109
W DS +
Sbjct: 431 WDDSGQH 437
>sp|Q1JLA1|OBG_STRPC GTPase obg OS=Streptococcus pyogenes serotype M12 (strain MGAS9429)
GN=obg PE=3 SV=1
Length = 437
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L ADLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDEADLVDEEAYYGFAETEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDPVRIGKFEFEFVD 437
>sp|Q1JBB7|OBG_STRPB GTPase obg OS=Streptococcus pyogenes serotype M12 (strain MGAS2096)
GN=obg PE=3 SV=1
Length = 437
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L ADLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDEADLVDEEAYYGFAETEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDPVRIGKFEFEFVD 437
>sp|A2RE30|OBG_STRPG GTPase obg OS=Streptococcus pyogenes serotype M5 (strain Manfredo)
GN=obg PE=3 SV=1
Length = 437
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L ADLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDEADLVDEEAYYGFAETEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDPVRIGKFEFEFVD 437
>sp|Q1J652|OBG_STRPF GTPase obg OS=Streptococcus pyogenes serotype M4 (strain MGAS10750)
GN=obg PE=3 SV=1
Length = 437
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L ADLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDEADLVDEEAYYGFAETEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD 437
>sp|Q5XBM1|OBG_STRP6 GTPase obg OS=Streptococcus pyogenes serotype M6 (strain ATCC
BAA-946 / MGAS10394) GN=obg PE=3 SV=1
Length = 437
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L ADLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDEADLVDEEAYYGFAETEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD 437
>sp|A5UZ80|OBG_ROSS1 GTPase obg OS=Roseiflexus sp. (strain RS-1) GN=obg PE=3 SV=1
Length = 439
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 42 SNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEM 101
S+ W V G ++R + MTN+ D+ R Q LEA G++ +L + G++ GDTV +
Sbjct: 365 SDGWRVRGRKIERLISMTNFAQPDAIMRIQRVLEASGISAALQEAGIQNGDTVYIEKAAF 424
Query: 102 VWHD 105
W D
Sbjct: 425 EWED 428
>sp|Q1JGD5|OBG_STRPD GTPase obg OS=Streptococcus pyogenes serotype M2 (strain MGAS10270)
GN=obg PE=3 SV=1
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L +DLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDESDLVDEEAYYGFAKTEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDPVRIGKFEFEFVD 437
>sp|B5XLZ0|OBG_STRPZ GTPase obg OS=Streptococcus pyogenes serotype M49 (strain NZ131)
GN=obg PE=3 SV=1
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L ADLV+++ + + +FEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDEADLVDEEAYYGFAETEKNFEIIRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD 437
>sp|Q99Z94|OBG_STRP1 GTPase obg OS=Streptococcus pyogenes serotype M1 GN=obg PE=3 SV=1
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L +DLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDESDLVDEEAYYGFAETEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDPVRIGKFEFEFVD 437
>sp|Q8P0I6|OBG_STRP8 GTPase obg OS=Streptococcus pyogenes serotype M18 (strain MGAS8232)
GN=obg PE=3 SV=1
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L +DLV+++ + + DFEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKDFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD 437
>sp|C0ZAL7|OBG_BREBN GTPase obg OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=obg PE=3 SV=1
Length = 425
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D+ + V G +++ V+MTN D+ +RF + + GV +L KLG K+GDT
Sbjct: 356 FEITRDN--EVFVVSGEKIEKLVRMTNLNSYDAAQRFARQMRSMGVDDALRKLGAKDGDT 413
Query: 94 VIVGDME 100
V +G +E
Sbjct: 414 VRIGKLE 420
>sp|B9LC30|OBG_CHLSY GTPase obg OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637
/ Y-400-fl) GN=obg PE=3 SV=1
Length = 439
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 45 WNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWH 104
+ V G ++R + M+N ++ R Q LEA G+ ++L+ GV++GD V +G E+VW
Sbjct: 373 FRVRGIKIERLIAMSNLDQDEALDRIQRVLEASGINEALIAAGVQDGDLVRIGRAELVWD 432
Query: 105 DSANN 109
DS +
Sbjct: 433 DSGQH 437
>sp|A9WK62|OBG_CHLAA GTPase obg OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635
/ J-10-fl) GN=obg PE=3 SV=1
Length = 439
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 45 WNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWH 104
+ V G ++R + M+N ++ R Q LEA G+ ++L+ GV++GD V +G E+VW
Sbjct: 373 FRVRGIKIERLIAMSNLDQDEALDRIQRVLEASGINEALIAAGVQDGDLVRIGRAELVWD 432
Query: 105 DSANN 109
DS +
Sbjct: 433 DSGQH 437
>sp|A9AXD9|OBG_HERA2 GTPase obg OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM
785) GN=obg PE=3 SV=1
Length = 437
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 47 VVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHDS 106
V G ++R V MTN+ +S R Q LEA GV+ +L GV+ GD V + E++W D
Sbjct: 375 VHGEKIERLVSMTNFAQSESLERLQRVLEAMGVSAALFAAGVRHGDPVRIEKAELLWQDE 434
Query: 107 A 107
+
Sbjct: 435 S 435
>sp|Q48SX8|OBG_STRPM GTPase obg OS=Streptococcus pyogenes serotype M28 (strain MGAS6180)
GN=obg PE=3 SV=1
Length = 437
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L +DLV+++ + + +FEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKEFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD 437
>sp|P0DB53|OBG_STRPQ GTPase obg OS=Streptococcus pyogenes serotype M3 (strain SSI-1)
GN=obg PE=3 SV=1
Length = 437
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L +DLV+++ + + +FEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKEFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD 437
>sp|P0DB52|OBG_STRP3 GTPase obg OS=Streptococcus pyogenes serotype M3 (strain ATCC
BAA-595 / MGAS315) GN=obg PE=3 SV=1
Length = 437
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD+ L +DLV+++ + + +FEI D + TW + G L+R MT
Sbjct: 333 TAELLAKTDEFLLYDESDLVDEEAYYGFAEAEKEFEITRDDDA-TWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGKFEFEFVD 437
>sp|B1HVB2|OBG_LYSSC GTPase obg OS=Lysinibacillus sphaericus (strain C3-41) GN=obg PE=3
SV=2
Length = 429
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 21 DLVNKQRSASI--------NDFEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQH 72
D V +Q A++ DFEI D T+ + G ++R +MT++ D RRF
Sbjct: 338 DEVEEQSDATVMYKHEAKGEDFEITRDD-DGTFIISGYAIERLFKMTDFSREDGIRRFAR 396
Query: 73 GLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
L A GV ++L + G ++GDTV + + E + D
Sbjct: 397 QLRAMGVDEALRERGAQDGDTVRLQEFEFEFVD 429
>sp|A7NRU6|OBG_ROSCS GTPase obg OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
GN=obg PE=3 SV=2
Length = 439
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 45 WNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWH 104
W V G ++R + MTN+ D+ R Q LEA G+ +L + G++ GD + + W
Sbjct: 368 WRVRGRRIERLISMTNFAQPDAIMRIQRVLEASGIGAALQEAGIQNGDVLYIEQAAFDWE 427
Query: 105 DSA 107
D A
Sbjct: 428 DGA 430
>sp|Q92BH7|OBG_LISIN GTPase obg OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=obg PE=3 SV=1
Length = 429
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MLTSSTILDGTDQVNLNQV-----ADLVNKQRSASINDFEIFHDSGSNTWNVVGAGLQRF 55
+L + L+ T + LN++ D V + A DFEI + T+ + GA ++R
Sbjct: 321 LLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEITREP-DGTFVLSGAKIERL 379
Query: 56 VQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN+ S RF L A GV ++L K G K+GD V + D E + D
Sbjct: 380 FTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD 429
>sp|B2GBD0|OBG_LACF3 GTPase obg OS=Lactobacillus fermentum (strain NBRC 3956 / LMG
18251) GN=obg PE=3 SV=1
Length = 435
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 33 DFEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGD 92
DF I D TW + GA L+R MTN + DS+ RF L GV +L + G+++GD
Sbjct: 364 DFTISRDD-DGTWVLSGAKLERLFVMTNLDHEDSQLRFARQLRHMGVDDALREAGIQDGD 422
Query: 93 TVIVGD 98
V + D
Sbjct: 423 LVRIED 428
>sp|Q8Y6Z3|OBG_LISMO GTPase obg OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=obg PE=3 SV=1
Length = 429
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MLTSSTILDGTDQVNLNQV-----ADLVNKQRSASINDFEIFHDSGSNTWNVVGAGLQRF 55
+L + L+ T + LN++ D V + A DFEI + T+ + GA ++R
Sbjct: 321 LLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEISREP-DGTFVLSGAKIERL 379
Query: 56 VQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN+ S RF L A GV ++L K G K+GD V + D E + D
Sbjct: 380 FTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD 429
>sp|Q71ZD3|OBG_LISMF GTPase obg OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=obg PE=3 SV=1
Length = 429
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MLTSSTILDGTDQVNLNQV-----ADLVNKQRSASINDFEIFHDSGSNTWNVVGAGLQRF 55
+L + L+ T + LN++ D V + A DFEI + T+ + GA ++R
Sbjct: 321 LLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEISREP-DGTFVLSGAKIERL 379
Query: 56 VQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN+ S RF L A GV ++L K G K+GD V + D E + D
Sbjct: 380 FTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD 429
>sp|B8DHL1|OBG_LISMH GTPase obg OS=Listeria monocytogenes serotype 4a (strain HCC23)
GN=obg PE=3 SV=1
Length = 429
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MLTSSTILDGTDQVNLNQV-----ADLVNKQRSASINDFEIFHDSGSNTWNVVGAGLQRF 55
+L + L+ T + LN++ D V + A DFEI + T+ + GA ++R
Sbjct: 321 LLAIADKLETTPEFPLNEILEQEDEDTVLYKYVADEPDFEISREP-DGTFVLSGAKIERL 379
Query: 56 VQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN+ S RF L A GV ++L K G K+GD V + D E + D
Sbjct: 380 FTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD 429
>sp|Q03JJ8|OBG_STRTD GTPase obg OS=Streptococcus thermophilus (strain ATCC BAA-491 /
LMD-9) GN=obg PE=3 SV=1
Length = 437
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQRSASIND----FEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +LD TD+ L D+ ++ N+ FEI D + +W + G L++ MT
Sbjct: 333 TAELLDQTDEFLLYNEDDMEQEEVYYGFNEEERPFEISRDDDA-SWVLSGEKLEKLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G+ E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD 437
>sp|Q5M3C8|OBG_STRT2 GTPase obg OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG
18311) GN=obg PE=3 SV=1
Length = 437
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQRSASIND----FEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +LD TD+ L D+ ++ N+ FEI D + +W + G L++ MT
Sbjct: 333 TAELLDQTDEFLLYNEDDMEQEEVYYGFNEEERPFEISRDDDA-SWVLSGEKLEKLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G+ E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD 437
>sp|Q5LYR4|OBG_STRT1 GTPase obg OS=Streptococcus thermophilus (strain CNRZ 1066) GN=obg
PE=3 SV=1
Length = 437
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQRSASIND----FEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +LD TD+ L D+ ++ N+ FEI D + +W + G L++ MT
Sbjct: 333 TAELLDQTDEFLLYNEDDMEQEEVYYGFNEEERPFEISRDDDA-SWVLSGEKLEKLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G+ E + D
Sbjct: 392 NMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD 437
>sp|Q1WT46|OBG_LACS1 GTPase obg OS=Lactobacillus salivarius (strain UCC118) GN=obg PE=3
SV=1
Length = 432
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
F+I DS + TW + G L+R +MTN+ + +S RF L GV +L + GVK GD
Sbjct: 362 FKITRDSDA-TWVLSGEKLERLFKMTNFNHDESLMRFARQLRGMGVDDALRERGVKGGDL 420
Query: 94 VIVGD 98
V + D
Sbjct: 421 VRIED 425
>sp|B9DSH7|OBG_STRU0 GTPase obg OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J)
GN=obg PE=3 SV=1
Length = 438
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 4 SSTILDGTDQVNLN-----QVADLVNKQRSASINDFEIFHDSGSNTWNVVGAGLQRFVQM 58
++ +L TD+ L QV D V S FEI D + +W + G L+R M
Sbjct: 333 TANLLASTDEFLLYDESDYQVEDEVYYGFSEEEKAFEITRDDDA-SWVLSGEKLERLFVM 391
Query: 59 TNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
TN +S +F L GV ++L + G K+GD V +G+ E + D
Sbjct: 392 TNMERDESIMKFARQLRGMGVDEALRERGAKDGDLVRIGNFEFEFVD 438
>sp|A0AIY6|OBG_LISW6 GTPase obg OS=Listeria welshimeri serovar 6b (strain ATCC 35897 /
DSM 20650 / SLCC5334) GN=obg PE=3 SV=1
Length = 429
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1 MLTSSTILDGTDQVNLNQV-----ADLVNKQRSASINDFEIFHDSGSNTWNVVGAGLQRF 55
+L + L+ T + LN++ D V + A DFEI + T+ + G ++R
Sbjct: 321 LLAIADKLETTPEFPLNEILEQEDEDTVLYKYIAEEPDFEITREP-DGTFVLSGTKIERL 379
Query: 56 VQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN+ S RF L A GV ++L K G K+GD V + D E + D
Sbjct: 380 FTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD 429
>sp|A4J7I9|OBG_DESRM GTPase obg OS=Desulfotomaculum reducens (strain MI-1) GN=obg PE=3
SV=1
Length = 422
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
F I D N W V G ++R V MT S R Q ++ G+ L++ GVK GD
Sbjct: 352 FNIKRDIDGN-WRVTGKEIERHVAMTYLEEDQSLERLQRIMKMMGLENGLVEAGVKVGDI 410
Query: 94 VIVGDMEMVWHD 105
V +GD E W +
Sbjct: 411 VRIGDWEFEWSE 422
>sp|Q8DYL0|OBG_STRA5 GTPase obg OS=Streptococcus agalactiae serotype V (strain ATCC
BAA-611 / 2603 V/R) GN=obg PE=3 SV=1
Length = 437
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 1 MLTSSTILDGTDQVNLNQVADLVNKQRSASIND----FEIFHDSGSNTWNVVGAGLQRFV 56
M ++ +L T++ L D+ + N+ FEI D + TW + G L++
Sbjct: 330 MDATAELLANTEEFLLYDETDMQEDEAYYGFNEDERPFEITRDDDA-TWVLYGDKLEKLF 388
Query: 57 QMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN +S +F L GV ++L + G K+GD V +G+ E + D
Sbjct: 389 VMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD 437
>sp|Q8E465|OBG_STRA3 GTPase obg OS=Streptococcus agalactiae serotype III (strain NEM316)
GN=obg PE=3 SV=1
Length = 437
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 1 MLTSSTILDGTDQVNLNQVADLVNKQRSASIND----FEIFHDSGSNTWNVVGAGLQRFV 56
M ++ +L T++ L D+ + N+ FEI D + TW + G L++
Sbjct: 330 MDATAELLANTEEFLLYDETDMQEDEAYYGFNEDERPFEITRDDDA-TWVLYGDKLEKLF 388
Query: 57 QMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN +S +F L GV ++L + G K+GD V +G+ E + D
Sbjct: 389 VMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD 437
>sp|Q3K046|OBG_STRA1 GTPase obg OS=Streptococcus agalactiae serotype Ia (strain ATCC
27591 / A909 / CDC SS700) GN=obg PE=3 SV=1
Length = 437
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 1 MLTSSTILDGTDQVNLNQVADLVNKQRSASIND----FEIFHDSGSNTWNVVGAGLQRFV 56
M ++ +L T++ L D+ + N+ FEI D + TW + G L++
Sbjct: 330 MDATAELLANTEEFLLYDETDMQEDEAYYGFNEDERPFEITRDDDA-TWVLYGDKLEKLF 388
Query: 57 QMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
MTN +S +F L GV ++L + G K+GD V +G+ E + D
Sbjct: 389 VMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD 437
>sp|Q24SP0|OBG_DESHY GTPase obg OS=Desulfitobacterium hafniense (strain Y51) GN=obg PE=3
SV=1
Length = 424
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 47 VVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
V G +++ VQMT + D RFQ+ L+A G+ ++L+ G+K GD V + +E W +
Sbjct: 366 VSGKEIEKHVQMTMFDREDGLYRFQNILKAMGIERALLDEGIKVGDKVRIAGIEFEWEE 424
>sp|Q6KHM2|OBG_MYCMO GTPase obg OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC
11711) GN=obg PE=3 SV=1
Length = 422
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 33 DFEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGD 92
DFE+ S N++ VVG + VQ + ++ R + L+ GV + L+K VK GD
Sbjct: 345 DFEVVKKS-ENSFEVVGKKITDLVQRIPFNTYENLMRLNNKLKNLGVWEELIKYNVKNGD 403
Query: 93 TVIVGDMEMVWHD 105
V +G+ E+ W++
Sbjct: 404 YVKIGEFELEWNN 416
>sp|B8FUR9|OBG_DESHD GTPase obg OS=Desulfitobacterium hafniense (strain DCB-2 / DSM
10664) GN=obg PE=3 SV=1
Length = 424
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 47 VVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
V G +++ VQMT + D RFQ+ L+A G+ ++L+ G+K GD V + +E W +
Sbjct: 366 VSGKEVEKHVQMTMFDREDGLYRFQNILKAMGIERALLDEGIKVGDKVRIAGIEFEWEE 424
>sp|Q67SC6|OBG_SYMTH GTPase obg OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=obg PE=3 SV=1
Length = 425
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 45 WNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDME 100
W+V G ++R V MT W ++ RF L GV ++L + G ++GDTV V D+E
Sbjct: 362 WHVEGKEIERLVAMTMWENDEAVARFLRILRLKGVEQALREAGAEDGDTVRVCDIE 417
>sp|Q834V4|OBG_ENTFA GTPase obg OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=obg PE=3 SV=1
Length = 438
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 44 TWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDME 100
+W + G L++ +MTN+ + ++ RF L GV ++L G K+GD V +G+ E
Sbjct: 377 SWVLSGEKLEKLFEMTNFDHDETVMRFARQLRGMGVDEALRARGAKDGDIVRIGNFE 433
>sp|C0MBS1|OBG_STRE4 GTPase obg OS=Streptococcus equi subsp. equi (strain 4047) GN=obg
PE=3 SV=1
Length = 437
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 4 SSTILDGTDQVNLNQVADLVNKQR----SASINDFEIFHDSGSNTWNVVGAGLQRFVQMT 59
++ +L TD L ADL + +A FEI + W + G L+R MT
Sbjct: 333 TAELLAKTDDFLLYDEADLAEDEAYYGFAAEEKAFEI-SRADDAAWVLSGEKLERLFVMT 391
Query: 60 NWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVWHD 105
N +S +F L GV ++L + G K+GD V +G E + D
Sbjct: 392 NLERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGKFEFEFVD 437
>sp|Q97QW8|OBG_STRPN GTPase obg OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=obg PE=3 SV=1
Length = 434
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D + TW + G L + MTN+ +S +F L GV ++L G K+GD
Sbjct: 364 FEISRDDDA-TWVLSGEKLMKLFNMTNFDRDESVMKFARQLRGMGVDEALRARGAKDGDL 422
Query: 94 VIVGDMEMVWHD 105
V +G E + D
Sbjct: 423 VRIGKFEFEFVD 434
>sp|B8ZPS8|OBG_STRPJ GTPase obg OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain
23F-1) GN=obg PE=3 SV=1
Length = 434
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D + TW + G L + MTN+ +S +F L GV ++L G K+GD
Sbjct: 364 FEISRDDDA-TWVLSGEKLMKLFNMTNFDRDESVMKFARQLRGMGVDEALRARGAKDGDL 422
Query: 94 VIVGDMEMVWHD 105
V +G E + D
Sbjct: 423 VRIGKFEFEFVD 434
>sp|B5E4J4|OBG_STRP4 GTPase obg OS=Streptococcus pneumoniae serotype 19F (strain G54)
GN=obg PE=3 SV=1
Length = 434
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D + TW + G L + MTN+ +S +F L GV ++L G K+GD
Sbjct: 364 FEISRDDDA-TWVLSGEKLMKLFNMTNFDRDESVMKFARQLRGMGVDEALRARGAKDGDL 422
Query: 94 VIVGDMEMVWHD 105
V +G E + D
Sbjct: 423 VRIGKFEFEFVD 434
>sp|Q8DPV8|OBG_STRR6 GTPase obg OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=obg PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D + TW + G L + MTN+ +S +F L GV ++L G K+GD
Sbjct: 366 FEISRDDDA-TWVLSGEKLMKLFNMTNFDRDESVMKFARQLRGMGVDEALRARGAKDGDL 424
Query: 94 VIVGDMEMVWHD 105
V +G E + D
Sbjct: 425 VRIGKFEFEFVD 436
>sp|B2IQ29|OBG_STRPS GTPase obg OS=Streptococcus pneumoniae (strain CGSP14) GN=obg PE=3
SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D + TW + G L + MTN+ +S +F L GV ++L G K+GD
Sbjct: 366 FEISRDDDA-TWVLSGEKLMKLFNMTNFDRDESVMKFARQLRGMGVDEALRARGAKDGDL 424
Query: 94 VIVGDMEMVWHD 105
V +G E + D
Sbjct: 425 VRIGKFEFEFVD 436
>sp|Q04KK7|OBG_STRP2 GTPase obg OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=obg PE=3 SV=1
Length = 436
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D + TW + G L + MTN+ +S +F L GV ++L G K+GD
Sbjct: 366 FEISRDDDA-TWVLSGEKLMKLFNMTNFDRDESVMKFARQLRGMGVDEALRARGAKDGDL 424
Query: 94 VIVGDMEMVWHD 105
V +G E + D
Sbjct: 425 VRIGKFEFEFVD 436
>sp|B9L101|OBG_THERP GTPase obg OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159
/ P-2) GN=obg PE=3 SV=1
Length = 467
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 49 GAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDTVIVGDMEMVW 103
G ++R MT++ ++ R+Q L G+++ L+ LG++ GD V V E+VW
Sbjct: 374 GPKIERLTLMTDFSNPEAAERYQRLLARWGISRRLLALGIQPGDIVHVAGRELVW 428
>sp|Q65GM7|OBG_BACLD GTPase obg OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580)
GN=obg PE=3 SV=1
Length = 428
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D T+ + GA L+R +MT++ +S +RF L GV +L G K+GDT
Sbjct: 358 FEISRDP-DGTFVLSGAKLERLFKMTDFSRDESVKRFARQLRGMGVDDALRARGAKDGDT 416
Query: 94 VIVGDMEMVWHD 105
+ + + E + D
Sbjct: 417 IRLLEFEFEFID 428
>sp|A8AWM9|OBG_STRGC GTPase obg OS=Streptococcus gordonii (strain Challis / ATCC 35105 /
CH1 / DL1 / V288) GN=obg PE=3 SV=1
Length = 436
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 34 FEIFHDSGSNTWNVVGAGLQRFVQMTNWRYLDSERRFQHGLEACGVTKSLMKLGVKEGDT 93
FEI D + TW + G L++ MTN+ ++ +F L GV ++L G K+GD
Sbjct: 366 FEISRDDDA-TWVLSGDKLEKLFNMTNFDRDEAVMKFARQLRGMGVDEALRARGAKDGDL 424
Query: 94 VIVGDMEMVWHD 105
V +G E + D
Sbjct: 425 VRIGKFEFEFVD 436
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,237,096
Number of Sequences: 539616
Number of extensions: 1848197
Number of successful extensions: 5389
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5173
Number of HSP's gapped (non-prelim): 226
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)