BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044272
(133 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 88/144 (61%), Gaps = 11/144 (7%)
Query: 1 MPG-LTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPE 59
MPG L +GD PN + T G + HDF+GD+W I+FSHP DFTPV TTELG+ A PE
Sbjct: 1 MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVXTTELGRAAKLAPE 60
Query: 60 FDKREVKLLGLSCDDVKSHNEWIKDIEAYT----------PIIADPNREIIKQLNMVDPD 109
F KR VKL+ LS D V+ H W KDI AY PII D NRE+ L M+DP
Sbjct: 61 FAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPA 120
Query: 110 EKDSSGKQLPSRALHIVGPDHQVQ 133
EKD G + +R + + GPD +++
Sbjct: 121 EKDEKGMPVTARVVFVFGPDKKLK 144
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 139 bits (349), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 92/139 (66%), Gaps = 8/139 (5%)
Query: 3 GLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK 62
G+T+G+ PN + + G K HD++G++W ++FSHP DFTPV TTELG++ +F K
Sbjct: 2 GITLGEVFPNFEADSTIGKLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK 61
Query: 63 REVKLLGLSCDDVKSHNEWIKDIEAYT--------PIIADPNREIIKQLNMVDPDEKDSS 114
R VKL+ LSCD+V H EW +D++ + PIIAD RE+ +L MVDPDE+ S+
Sbjct: 62 RGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTST 121
Query: 115 GKQLPSRALHIVGPDHQVQ 133
G L RA+ I+GPD +++
Sbjct: 122 GMPLTCRAVFIIGPDKKLK 140
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 115 bits (289), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 86/140 (61%), Gaps = 9/140 (6%)
Query: 3 GLTIGDSVPNLQVQTN--QGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60
G +G + PN + + G+F+L+ +I ++W I+FSHP DFTPVCTTEL ++ +F
Sbjct: 2 GYHLGATFPNFTAKASGIDGDFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDF 61
Query: 61 DKREVKLLGLSCDDVKSHNEWIKDIEAY-------TPIIADPNREIIKQLNMVDPDEKDS 113
K KL+G SC+ +SH++WI+DI+ Y PI+ D +RE+ +L ++D EKD
Sbjct: 62 LKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDI 121
Query: 114 SGKQLPSRALHIVGPDHQVQ 133
+G L R L + P+ +++
Sbjct: 122 TGLPLTCRCLFFISPEKKIK 141
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 85/140 (60%), Gaps = 9/140 (6%)
Query: 3 GLTIGDSVPNLQVQTN--QGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60
G +G + PN + + G+F+L+ +I ++W I+FSHP DFTPV TTEL ++ +F
Sbjct: 2 GYHLGATFPNFTAKASGIDGDFELYKYIENSWAILFSHPNDFTPVXTTELAELGKMHEDF 61
Query: 61 DKREVKLLGLSCDDVKSHNEWIKDIEAY-------TPIIADPNREIIKQLNMVDPDEKDS 113
K KL+G SC+ +SH++WI+DI+ Y PI+ D +RE+ +L ++D EKD
Sbjct: 62 LKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDI 121
Query: 114 SGKQLPSRALHIVGPDHQVQ 133
+G L R L + P+ +++
Sbjct: 122 TGLPLTCRCLFFISPEKKIK 141
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Query: 1 MPGLT--IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAY 56
MPG IG+ P ++V T+ G KL H W ++FSHP DFTPVCTTE A
Sbjct: 1 MPGSIPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARR 60
Query: 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
+F + V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 61 YEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 116
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 6 IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR 63
IG+ P ++V T+ G KL H W ++FSHP DFTPVCTTE A +F +
Sbjct: 7 IGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL 66
Query: 64 EVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 67 GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 6 IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR 63
IG+ P ++V T+ G KL H W ++FSHP DFTPVCTTE A +F +
Sbjct: 7 IGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL 66
Query: 64 EVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 67 GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 6 IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR 63
IG+ P +V T+ G KL H W ++FSHP DFTPVCTTE A +F +
Sbjct: 7 IGERFPEXEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL 66
Query: 64 EVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 67 GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 1 MPGLT--IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAY 56
MPG IG+ P ++V T+ G KL H W ++FSHP DFTPV TTE A
Sbjct: 1 MPGSIPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARR 60
Query: 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
+F + V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 61 YEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 116
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 6 IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR 63
IG+ P ++V T+ G KL H W ++FSHP DFTPV TTE A +F +
Sbjct: 7 IGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVSTTEFVSFARRYEDFQRL 66
Query: 64 EVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 67 GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 6 IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR 63
IG+ P ++V T+ G KL H W ++FSHP DFTPV TTE A +F +
Sbjct: 7 IGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRL 66
Query: 64 EVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 67 GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 6 IGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR 63
IG+ P +V T+ G KL H W ++FSHP DFTPV TTE A +F +
Sbjct: 8 IGERFPEXEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRYEDFQRL 67
Query: 64 EVKLLGLSCDDVKSHNEWIKDIEAYT------PIIADPNREIIKQLNMV 106
V L+GLS D V SH +W + IE + PIIADP + ++L ++
Sbjct: 68 GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 116
>pdb|3GKK|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
+W +I+ +P D TP CTTE A +PEFDK K+LG+S D VKSH+ + P
Sbjct: 36 HWLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFP 95
Query: 91 IIADPNREIIKQLNMVDPDEKDSSGKQLPS--RALHIVGPDHQV 132
+++D + + + +++ EK+ GKQ+ R+ ++ P+ QV
Sbjct: 96 LVSDGDEALCRAFDVI--KEKNMYGKQVLGIERSTFLLSPEGQV 137
>pdb|3GKN|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
pdb|3GKN|B Chain B, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
Length = 163
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
+W +I+ +P D TP TTE A +PEFDK K+LG+S D VKSH+ + P
Sbjct: 36 HWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFP 95
Query: 91 IIADPNREIIKQLNMVDPDEKDSSGKQLPS--RALHIVGPDHQV 132
+++D + + + +++ EK+ GKQ+ R+ ++ P+ QV
Sbjct: 96 LVSDGDEALCRAFDVI--KEKNMYGKQVLGIERSTFLLSPEGQV 137
>pdb|3GKM|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
+W +I+ +P D TP TTE A +PEFDK K+LG+S D VKSH+ + P
Sbjct: 36 HWLVIYFYPKDSTPGSTTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFSAKQGFAFP 95
Query: 91 IIADPNREIIKQLNMVDPDEKDSSGKQLPS--RALHIVGPDHQV 132
+++D + + + +++ EK+ GKQ+ R+ ++ P+ QV
Sbjct: 96 LVSDGDEALCRAFDVI--KEKNMYGKQVLGIERSTFLLSPEGQV 137
>pdb|3IXR|A Chain A, Crystal Structure Of Xylella Fastidiosa Prxq C47s Mutant
Length = 179
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89
+ W +++ +P D TP +TE + +P+F++ +LG+S D VKSH+ +
Sbjct: 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTF 110
Query: 90 PIIADPNREIIKQLNMVDPDEKDSSGKQLPS--RALHIVGPDHQV 132
P+++D + + K +++ EK G+Q+ R+ ++GP H++
Sbjct: 111 PLVSDSDAILCKAFDVI--KEKTMYGRQVIGIERSTFLIGPTHRI 153
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 2 PGLTIGDSVPNLQ-----------VQTNQGNFKLHDFIGD----NWTIIFSHPGDFTPVC 46
P LTIGD P Q V Q D W ++F P DFT VC
Sbjct: 2 PLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVC 61
Query: 47 TTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIK---DIEAY-TPIIADPNREIIKQ 102
TE+ + EF+ R+ ++LG+S D +H +W D++ P ++D RE+ +
Sbjct: 62 PTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPXLSDIKRELSQA 121
Query: 103 LNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
+++ D + R IV P++++Q
Sbjct: 122 AGVLNAD-------GVADRVTFIVDPNNEIQ 145
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
N L FIG + + +P ++T VC TE+ + ++ +F+ + V+LLG+S D V SH
Sbjct: 47 NVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLA 106
Query: 81 W---------IKDIEAYTPIIADPNREIIKQLNMV 106
W I ++E +++D N++I K N++
Sbjct: 107 WKNMPIEKGGIGNVEF--TLVSDINKDISKNYNVL 139
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
W++ F +P DFT VC TELG +A + E K V + +S D +H W E
Sbjct: 31 RWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAK 90
Query: 91 I----IADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
I I DP + + + + DE L RA +V P +Q
Sbjct: 91 IKYAMIGDPTGALTRNFDNMREDEG------LADRATFVVDPQGIIQ 131
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
W++ F +P DFT VC TELG +A + E K V + +S D +H W E
Sbjct: 31 RWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAK 90
Query: 91 I----IADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
I I DP + + + + DE L RA +V P +Q
Sbjct: 91 IKYAMIGDPTGALTRNFDNMREDEG------LADRATFVVDPQGIIQ 131
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
W++ F +P DFT VC TELG +A + E K V + +S D H W E
Sbjct: 31 RWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFDHKAWHSSSETIAK 90
Query: 91 I----IADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
I I DP + + + + DE L RA +V P +Q
Sbjct: 91 IKYAMIGDPTGALTRNFDNMREDEG------LADRATFVVDPQGIIQ 131
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
W++ F +P DFT VC TELG +A + E K V + +S D H W E
Sbjct: 31 RWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFVHKAWHSSSETIAK 90
Query: 91 I----IADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
I I DP + + + + DE L RA +V P +Q
Sbjct: 91 IKYAMIGDPTGALTRNFDNMREDEG------LADRATFVVDPQGIIQ 131
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
W++ F +P DFT VC TELG +A + E K V + +S D H W E
Sbjct: 31 RWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFIHKAWHSSSETIAK 90
Query: 91 I----IADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
I I DP + + + + DE L RA +V P +Q
Sbjct: 91 IKYAMIGDPTGALTRNFDNMREDEG------LADRATFVVDPQGIIQ 131
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 20 GNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHN 79
G L DFIG + +++ +P DFT VC +E+ + + F +R V+LLG S D +H
Sbjct: 21 GEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80
Query: 80 EWIK 83
W K
Sbjct: 81 AWKK 84
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 20 GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76
G FK L D+ G + ++F +P DFT VC TE+ + V EF+ R +++ S D
Sbjct: 54 GEFKEICLKDYRG-KYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY 112
Query: 77 SHNEWIKDIEAYT--------PIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGP 128
SH W +++ + P++AD +EI K + D ++ ++ R L I+ P
Sbjct: 113 SHLAW-DNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNA------FRGLFIIDP 165
Query: 129 D 129
+
Sbjct: 166 N 166
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 20 GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76
G FK L D+ G + ++F +P DFT VC TE+ + V EF+ R +++ S D
Sbjct: 54 GEFKEICLKDYRG-KYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY 112
Query: 77 SHNEWIKDIEAYT--------PIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGP 128
SH W +++ + P++AD +EI K + D ++ ++ R L I+ P
Sbjct: 113 SHLAW-DNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNA------FRGLFIIDP 165
Query: 129 D 129
+
Sbjct: 166 N 166
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 6 IGDSVPNLQVQTNQ--GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60
IG P+ + G FK L D+ G + + F +P DFT VC TE+ + EF
Sbjct: 8 IGHPAPSFKATAVMPDGQFKDISLSDYKG-KYVVFFFYPLDFTFVCPTEIIAFSDRAEEF 66
Query: 61 DKREVKLLGLSCDDVKSHNEWIKDIEAY-------TPIIADPNREIIKQLNMVDPDE 110
K +++G S D SH WI + P+++DP R I + ++ DE
Sbjct: 67 KKLNCQVIGASVDSHFSHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 20 GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76
G FK L D+ G + ++F +P DFT VC TE+ + V EF+ R +++ S D
Sbjct: 57 GEFKEICLKDYRG-KYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY 115
Query: 77 SHNEWIKDIEAYT--------PIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGP 128
SH W +++ + P++AD +EI K + D ++ ++ R L I+ P
Sbjct: 116 SHLAW-DNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNA------FRGLFIIDP 168
Query: 129 D 129
+
Sbjct: 169 N 169
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 6 IGDSVPNLQVQTNQ--GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60
IG PN + G FK L D+ G + + F +P DFT VC TE+ + EF
Sbjct: 8 IGHPAPNFKATAVMPDGQFKDISLSDYKG-KYVVFFFYPLDFTFVCPTEIIAFSDRAEEF 66
Query: 61 DKREVKLLGLSCDDVKSHNEWIKDIEAY-------TPIIADPNREIIKQLNMVDPDE 110
K +++G S D H W+ + P+++DP R I + ++ DE
Sbjct: 67 KKLNSQVIGASVDSHFEHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
W++ F +P DFT V TELG +A + E K V + +S D +H W E
Sbjct: 31 RWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAK 90
Query: 91 I----IADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
I I DP + + + + DE L RA +V P +Q
Sbjct: 91 IKYAMIGDPTGALTRNFDNMREDEG------LADRATFVVDPQGIIQ 131
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 20 GNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHN 79
G L FIG + +++ +P DFT VC +E+ + + F +R V+LLG S D +H
Sbjct: 42 GEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHL 101
Query: 80 EWIK 83
W K
Sbjct: 102 AWKK 105
>pdb|4GQC|A Chain A, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|B Chain B, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|C Chain C, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|D Chain D, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
Length = 164
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 33 TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPII 92
++ P F+PVCT EL + + +K ++L +S D ++ + ++
Sbjct: 36 AVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLL 95
Query: 93 ADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132
+D NRE+IK N+ D K K + RA+ IV PD V
Sbjct: 96 SDYNREVIKLYNVYHEDLK--GLKMVAKRAVFIVKPDGTV 133
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 20 GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76
G FK L + G W ++F +P DFT VC TE+ + + V EF ++L S D
Sbjct: 24 GTFKKVALTSYKG-KWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEY 82
Query: 77 SHNEWIKDIEAY--------TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGP 128
SH W IE PI+AD + I+K ++ K+ G + R L I+ P
Sbjct: 83 SHLAWT-SIERKRGGLGQMNIPILADKTKCIMKSYGVL----KEEDG--VAYRGLFIIDP 135
Query: 129 DHQVQ 133
++
Sbjct: 136 KQNLR 140
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
W+I+ +P DF+ VC TEL + E K V++ +S D H W ++ A
Sbjct: 32 KWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGS 91
Query: 91 I----IADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
I I DP++ I +Q ++++ + L R I+ PD +Q
Sbjct: 92 IEYIMIGDPSQTISRQFDVLNEE------TGLADRGTFIIDPDGVIQ 132
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 6 IGDSVPNLQVQTNQ--GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60
IG PN + G FK L D+ G + + F +P DFT V TE+ + EF
Sbjct: 8 IGHPAPNFKATAVMPDGQFKDISLSDYKG-KYVVFFFYPLDFTFVDPTEIIAFSDRAEEF 66
Query: 61 DKREVKLLGLSCDDVKSHNEWIKDIEAY-------TPIIADPNREIIKQLNMVDPDE 110
K +++G S D H EW+ + P+++DP R I + ++ DE
Sbjct: 67 KKLNSQVIGASVDSHFEHLEWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|2CX3|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX4|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|E Chain E, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|F Chain F, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|G Chain G, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|H Chain H, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|4GQF|A Chain A, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
pdb|4GQF|B Chain B, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
Length = 164
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 33 TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPII 92
++ P F+PVCT EL + +K ++L +S D ++ + ++
Sbjct: 36 AVLIFFPAAFSPVCTKELCTFRDKXAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLL 95
Query: 93 ADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132
+D NRE+IK N+ D K K + RA+ IV PD V
Sbjct: 96 SDYNREVIKLYNVYHEDLK--GLKXVAKRAVFIVKPDGTV 133
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 17/124 (13%)
Query: 20 GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76
G+FK L + G W ++F +P DFT VC TE+ + V F++ ++L S D
Sbjct: 44 GSFKKISLSSYKG-KWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEY 102
Query: 77 SHNEW-IKDIE------AYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPD 129
+H +W ++D + PI+AD + I + +++ +S G + R L I+ P
Sbjct: 103 AHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLE----ESQG--VAYRGLFIIDPH 156
Query: 130 HQVQ 133
++
Sbjct: 157 GMLR 160
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 6 IGDSVPNLQVQTNQ--GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60
IG P+ + G FK L D+ G + + F +P DFT V TE+ + EF
Sbjct: 8 IGHPAPSFKATAVMPDGQFKDISLSDYKG-KYVVFFFYPLDFTFVSPTEIIAFSDRAEEF 66
Query: 61 DKREVKLLGLSCDDVKSHNEWIKDIEAY-------TPIIADPNREIIKQLNMVDPDE 110
K +++G S D H WI + P+++DP R I + ++ DE
Sbjct: 67 KKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADE 123
>pdb|2YWN|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Sulfolobus Tokodaii
pdb|4G2E|A Chain A, Crystal Structure Of A Dimeric Prxq From Sulfolobus
Tokodaii
Length = 157
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 4 LTIGDSVPNLQV-QTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK 62
+ IG+ P+ ++ T KL G + F +P FT VCT E+ + +F++
Sbjct: 4 VEIGELAPDFELPDTELKKVKLSALKGKVVVLAF-YPAAFTQVCTKEMCTFRDSMAKFNQ 62
Query: 63 REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRA 122
+LG+S D S+ + + + I++D NRE++K+ N V + G L RA
Sbjct: 63 VNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYN-VAWEFPALPGYVLAKRA 121
Query: 123 LHIVGPDHQVQ 133
+ ++ + +V+
Sbjct: 122 VFVIDKEGKVR 132
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 20 GNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76
G FK L + G + ++F +P DFT VC TE+ + + F + +++ SCD
Sbjct: 24 GTFKKVSLSSYKG-KYVVLFFYPXDFTFVCPTEIIQFSDDAKRFAEINTEVISCSCDSEY 82
Query: 77 SHNEWIKDIE-------AYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPD 129
SH +W P +AD + I + ++D D SG + R + I+ P+
Sbjct: 83 SHLQWTSVDRKKGGLGPXAIPXLADKTKAIARAYGVLDED----SG--VAYRGVFIIDPN 136
Query: 130 HQVQ 133
+++
Sbjct: 137 GKLR 140
>pdb|3DRN|A Chain A, The Crystal Structure Of Bcp1 From Sulfolobus
Sulfataricus
pdb|3DRN|B Chain B, The Crystal Structure Of Bcp1 From Sulfolobus
Sulfataricus
Length = 161
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 4 LTIGDSVPNLQ-VQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK 62
+ +GD P + + N L D+IG + +++ +P D TP T E
Sbjct: 2 VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD 61
Query: 63 REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREI 99
+V ++G+S DD+ SH + + + +++DP+++I
Sbjct: 62 YDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKI 98
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase
(Ahpc) From Helicobacter Pylori
Length = 198
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
+F+L +G N I+F P DFT VC TE+ V +F ++ ++G+S D + H
Sbjct: 24 HFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFA 83
Query: 81 W 81
W
Sbjct: 84 W 84
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 23 KLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWI 82
KL D+ G + ++F +P DFT V TE+ + +F K ++LG+S D +H WI
Sbjct: 28 KLSDYKG-KYVVLFFYPLDFTFVXPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWI 86
Query: 83 KDIEAY-------TPIIADPNREIIKQLNMVDPDE 110
P++AD R + + ++ DE
Sbjct: 87 NTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDE 121
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 19 QGNFK---LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDV 75
G FK L DF G + ++F +P DFT VC TE+ + EF +++ +S D
Sbjct: 43 SGEFKEISLDDFKG-KYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSH 101
Query: 76 KSHNEWI 82
SH WI
Sbjct: 102 FSHLAWI 108
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 4 LTIGDSVPNLQVQ-TNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK 62
L +G + P+ ++ NQ L + G ++ P FT +C EL ++ ++PEF+
Sbjct: 2 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN 61
Query: 63 REVKLLGLSCDDVKSHNEWIKDIEAYTPIIAD 94
+ L +S +H W P+++D
Sbjct: 62 DDSAALAISVGPPPTHKIWATQSGFTFPLLSD 93
>pdb|1NM3|A Chain A, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
pdb|1NM3|B Chain B, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
Length = 241
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 7 GDSVPNLQVQTNQGN----FKLHDFIGDNWTIIFSHPGDFTPVCTTE-LGKMAAYVPEFD 61
G VP + +T QG+ + + I+FS PG FTP C++ L + P F
Sbjct: 6 GKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFK 65
Query: 62 KREV-KLLGLSCDDVKSHNEWIKDIEAYT-PIIADPNREIIKQLNMVDPDEKDSSGKQ 117
K V +L +S +D N W +D ++ I D N E + + E GK+
Sbjct: 66 KYGVDDILVVSVNDTFVXNAWKEDEKSENISFIPDGNGEFTEGXGXLVGKEDLGFGKR 123
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT VC TE+ + V EF +++ S D +H
Sbjct: 69 ELKLSDYRG-KYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLA 127
Query: 81 WI 82
WI
Sbjct: 128 WI 129
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 22 FKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81
KL D+ G + + F +P DFT VC TE+ + EF +++ S D +H W
Sbjct: 41 LKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAW 99
Query: 82 I 82
I
Sbjct: 100 I 100
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT VC TE+ + EF +++ S D +H
Sbjct: 83 ELKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLA 141
Query: 81 WI 82
WI
Sbjct: 142 WI 143
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT VC TE+ + EF +++ S D +H
Sbjct: 83 ELKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLA 141
Query: 81 WI 82
WI
Sbjct: 142 WI 143
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT VC TE+ + EF +++ S D +H
Sbjct: 83 ELKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLA 141
Query: 81 WI 82
WI
Sbjct: 142 WI 143
>pdb|2VL9|A Chain A, Oxidized Form Of Human Peroxiredoxin 5
pdb|2VL9|B Chain B, Oxidized Form Of Human Peroxiredoxin 5
pdb|2VL9|C Chain C, Oxidized Form Of Human Peroxiredoxin 5
pdb|2VL9|D Chain D, Oxidized Form Of Human Peroxiredoxin 5
Length = 173
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 4 LTIGDSVPNLQV-QTNQGN-FKLHDFIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEF 60
+ +GD++P ++V + GN L + ++F PG FTP C+ T L
Sbjct: 15 IKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEAL 74
Query: 61 DKREVKLLG-LSCDDVKSHNEWIK--DIEAYTPIIADPNREIIKQLNMV 106
+ V+++ LS +D EW + E ++ADP K+ +++
Sbjct: 75 KAKGVQVVASLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLL 123
>pdb|2VL2|A Chain A, Oxidized And Reduced Forms Of Human Peroxiredoxin 5
pdb|2VL2|B Chain B, Oxidized And Reduced Forms Of Human Peroxiredoxin 5
Length = 172
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 4 LTIGDSVPNLQV-QTNQGN-FKLHDFIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEF 60
+ +GD++P ++V + GN L + ++F PG FTP C+ T L
Sbjct: 14 IKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEAL 73
Query: 61 DKREVKLLG-LSCDDVKSHNEWIK--DIEAYTPIIADPNREIIKQLNMV 106
+ V+++ LS +D EW + E ++ADP K+ +++
Sbjct: 74 KAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLL 122
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT VC TE+ + EF +++ S D +H
Sbjct: 75 ELKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLA 133
Query: 81 WI 82
WI
Sbjct: 134 WI 135
>pdb|1OC3|A Chain A, Human Peroxiredoxin 5
pdb|1OC3|B Chain B, Human Peroxiredoxin 5
pdb|1OC3|C Chain C, Human Peroxiredoxin 5
pdb|2VL2|C Chain C, Oxidized And Reduced Forms Of Human Peroxiredoxin 5
pdb|2VL3|A Chain A, Oxidized And Reduced Forms Of Human Peroxiredoxin 5
pdb|2VL3|B Chain B, Oxidized And Reduced Forms Of Human Peroxiredoxin 5
pdb|2VL3|C Chain C, Oxidized And Reduced Forms Of Human Peroxiredoxin 5
Length = 172
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 4 LTIGDSVPNLQV-QTNQGN-FKLHDFIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEF 60
+ +GD++P ++V + GN L + ++F PG FTP C+ T L
Sbjct: 14 IKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEAL 73
Query: 61 DKREVKLLG-LSCDDVKSHNEWIK--DIEAYTPIIADPNREIIKQLNMV 106
+ V+++ LS +D EW + E ++ADP K+ +++
Sbjct: 74 KAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLL 122
>pdb|3HJP|A Chain A, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|B Chain B, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|C Chain C, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|D Chain D, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
Length = 164
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 4 LTIGDSVPNLQ-VQTNQGNFKL-HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFD 61
+ IG+ P ++ V T+ K+ DF G + F +P FT V T E+ + +F+
Sbjct: 2 VEIGEKAPEIELVDTDLKKVKIPSDFKGKVVVLAF-YPAAFTSVSTKEMSTFRDSMAKFN 60
Query: 62 KREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIK 101
+ ++G+S D S+ + + + I++D NRE +K
Sbjct: 61 EVNAVVIGISVDPPFSNKAFKEQNKINFTIVSDFNREAVK 100
>pdb|3MNG|A Chain A, Wild Type Human Prxv With Dtt Bound As A Competitive
Inhibitor
Length = 173
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 4 LTIGDSVPNLQV-QTNQGN-FKLHDFIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEF 60
+ +GD++P ++V + GN L + ++F PG FTP C+ T L
Sbjct: 15 IKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEAL 74
Query: 61 DKREVKLLG-LSCDDVKSHNEWIK--DIEAYTPIIADPNREIIKQLNMV 106
+ V+++ LS +D EW + E ++ADP K+ +++
Sbjct: 75 KAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLL 123
>pdb|1HD2|A Chain A, Human Peroxiredoxin 5
pdb|1H4O|A Chain A, Monoclinic Form Of Human Peroxiredoxin 5
pdb|1H4O|B Chain B, Monoclinic Form Of Human Peroxiredoxin 5
pdb|1H4O|C Chain C, Monoclinic Form Of Human Peroxiredoxin 5
pdb|1H4O|D Chain D, Monoclinic Form Of Human Peroxiredoxin 5
pdb|1H4O|E Chain E, Monoclinic Form Of Human Peroxiredoxin 5
pdb|1H4O|F Chain F, Monoclinic Form Of Human Peroxiredoxin 5
pdb|1H4O|G Chain G, Monoclinic Form Of Human Peroxiredoxin 5
pdb|1H4O|H Chain H, Monoclinic Form Of Human Peroxiredoxin 5
Length = 161
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 4 LTIGDSVPNLQV-QTNQGN-FKLHDFIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEF 60
+ +GD++P ++V + GN L + ++F PG FTP C+ T L
Sbjct: 3 IKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEAL 62
Query: 61 DKREVKLLG-LSCDDVKSHNEWIK--DIEAYTPIIADPNREIIKQLNMV 106
+ V+++ LS +D EW + E ++ADP K+ +++
Sbjct: 63 KAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLL 111
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT VC TE+ + EF +++ S D H
Sbjct: 75 ELKLTDYRG-KYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFEHLA 133
Query: 81 WI 82
WI
Sbjct: 134 WI 135
>pdb|1XVW|A Chain A, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
pdb|1XVW|B Chain B, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
Length = 160
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 4 LTIGDSVPNLQVQ-TNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK 62
L +G + P+ ++ NQ L + G ++ P FT + EL ++ ++PEF+
Sbjct: 9 LNVGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGIXQGELDQLRDHLPEFEN 68
Query: 63 REVKLLGLSCDDVKSHNEWIKDIEAYTPIIAD 94
+ L +S +H W P+++D
Sbjct: 69 DDSAALAISVGPPPTHKIWATQSGFTFPLLSD 100
>pdb|2A4V|A Chain A, Crystal Structure Of A Truncated Mutant Of Yeast Nuclear
Thiol Peroxidase
Length = 159
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 4 LTIGDSVPNLQV-QTNQGNFKLHDFIGDNWTIIF-SHPGDFTPVCTTELGKMAAYVPEFD 61
L IGD +P+L + + + L +N ++F +P TP T + E
Sbjct: 7 LEIGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQEL- 65
Query: 62 KREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREII 100
K + GLS D V S ++ +++DP RE I
Sbjct: 66 KEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFI 104
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT V TE+ + EF +++ S D +H
Sbjct: 83 ELKLTDYRG-KYLVFFFYPLDFTFVXPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLA 141
Query: 81 WI 82
WI
Sbjct: 142 WI 143
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80
KL D+ G + + F +P DFT V TE+ + EF +++ S D +H
Sbjct: 75 ELKLTDYRG-KYLVFFFYPLDFTFVXPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLA 133
Query: 81 WI 82
WI
Sbjct: 134 WI 135
>pdb|1TP9|A Chain A, Prx D (Type Ii) From Populus Tremula
pdb|1TP9|B Chain B, Prx D (Type Ii) From Populus Tremula
pdb|1TP9|C Chain C, Prx D (Type Ii) From Populus Tremula
pdb|1TP9|D Chain D, Prx D (Type Ii) From Populus Tremula
Length = 162
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 25/149 (16%)
Query: 1 MPGLTIGDSVPNLQV-----QTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAA 55
M + +GD +P+ ++ Q +H + I+F PG FTP C+ +
Sbjct: 1 MAPIAVGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLK------ 54
Query: 56 YVPEF--------DKREVKLLGLSCDDVKSHNEWIKDI--EAYTPIIADPNREIIKQLNM 105
+VP F K ++L +S +D W K + +AD + L +
Sbjct: 55 HVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALGL 114
Query: 106 -VDPDEKDSSGKQLPSRALHIVGPDHQVQ 133
+D EK G SR ++ D +V+
Sbjct: 115 ELDLQEK---GLGTRSRRFALLVDDLKVK 140
>pdb|3MTT|A Chain A, Crystal Structure Of Ish2 Domain Of Human P85beta,
Northeast Structural Genomics Consortium Target Hr5531c
Length = 187
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 31 NWTI-IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH----NEWIKDI 85
N TI IF G C+ E + + E +++E++ + L+ + +KS +E +
Sbjct: 54 NETIKIFEEQGQTQEKCSKEY--LERFRREGNEKEMQRILLNSERLKSRIAEIHESRTKL 111
Query: 86 EAYTPIIADPNREIIKQLNMVDPD 109
E A NREI K++N + PD
Sbjct: 112 EQQLRAQASDNREIDKRMNSLKPD 135
>pdb|4F82|A Chain A, X-Ray Crystal Structure Of A Putative Thioredoxin
Reductase From Burkholderia Cenocepacia
pdb|4F82|B Chain B, X-Ray Crystal Structure Of A Putative Thioredoxin
Reductase From Burkholderia Cenocepacia
Length = 176
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 31/142 (21%)
Query: 4 LTIGDSVPNLQV-----QTNQG------NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGK 52
+ +GD++P+ Q+ +G + D + +IF PG FTP C+ +
Sbjct: 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQ--- 66
Query: 53 MAAYVPEFDKREVKLLG--------LSCDDVKSHNEWIKDIEAYTPI--IADPNREIIKQ 102
+VP + + +L +S +D W +D+ + +AD +
Sbjct: 67 ---HVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHA 123
Query: 103 LNMVDPDEKDSSGKQLPSRALH 124
L + +D S + + R+L
Sbjct: 124 LGLT----QDLSARGMGIRSLR 141
>pdb|2Y3A|B Chain B, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 302
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 31 NWTI-IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH----NEWIKDI 85
N TI IF G C+ E + + E +++E++ + L+ + +KS +E +
Sbjct: 59 NETIKIFEEQGQTQEKCSKEY--LERFRREGNEKEMQRILLNSERLKSRIAEIHESRTKL 116
Query: 86 EAYTPIIADPNREIIKQLNMVDPD 109
E A NREI K++N + PD
Sbjct: 117 EQDLRAQASDNREIDKRMNSLKPD 140
>pdb|1XIY|A Chain A, Crystal Structure Of Plasmodium Falciparum Antioxidant
Protein (1-Cys Peroxiredoxin)
pdb|1XIY|B Chain B, Crystal Structure Of Plasmodium Falciparum Antioxidant
Protein (1-Cys Peroxiredoxin)
Length = 182
Score = 29.3 bits (64), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 25 HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK--REVKLLGLSC---DDVKSHN 79
H+ + ++ S PG FTP +T++ + Y E+D +E + C +D+
Sbjct: 38 HELFNNKKILLISLPGAFTPTXSTKM--IPGYEEEYDYFIKENNFDDIYCITNNDIYVLK 95
Query: 80 EWIKDIE-AYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIV 126
W K ++ I+D N +NM+ D+ + P R + IV
Sbjct: 96 SWFKSMDIKKIKYISDGNSSFTDSMNML-VDKSNFFMGMRPWRFVAIV 142
>pdb|2YZH|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|B Chain B, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|C Chain C, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|D Chain D, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
Length = 171
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 14/107 (13%)
Query: 2 PGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFD 61
P L +GD P V T K+ D +I + P TPVC TE K + +
Sbjct: 19 PELKVGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGME 78
Query: 62 KREVKLLGLS--------CDDVKSHNEWI------KDIEAYTPIIAD 94
+V ++ + C+ N + +D+E Y +I +
Sbjct: 79 GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLIGE 125
>pdb|2PWJ|A Chain A, Structure Of A Mitochondrial Type Ii Peroxiredoxin From
Pisum Sativum
pdb|2PWJ|B Chain B, Structure Of A Mitochondrial Type Ii Peroxiredoxin From
Pisum Sativum
pdb|2PWJ|C Chain C, Structure Of A Mitochondrial Type Ii Peroxiredoxin From
Pisum Sativum
pdb|2PWJ|D Chain D, Structure Of A Mitochondrial Type Ii Peroxiredoxin From
Pisum Sativum
pdb|2PWJ|E Chain E, Structure Of A Mitochondrial Type Ii Peroxiredoxin From
Pisum Sativum
pdb|2PWJ|F Chain F, Structure Of A Mitochondrial Type Ii Peroxiredoxin From
Pisum Sativum
Length = 171
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 24 LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVK----LLGLSCDDVKSHN 79
++D D +IF PG +T VC+++ + Y DK + K ++ ++ +D + N
Sbjct: 37 VNDIFKDKKVVIFGLPGAYTGVCSSK--HVPPYKHNIDKFKAKGVDSVICVAINDPYTVN 94
Query: 80 EWIKDIEAYTPI 91
W + I+A I
Sbjct: 95 AWAEKIQAKDAI 106
>pdb|2X1G|F Chain F, Crystal Structure Of Importin13 - Mago-Y14 Complex
pdb|2X1G|G Chain G, Crystal Structure Of Importin13 - Mago-Y14 Complex
Length = 971
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 49 ELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90
L ++ A +P ++K VKLLG + + + S+ W+ + AY P
Sbjct: 505 RLMRVLAEIP-YEKLNVKLLGTALETMGSYCNWLMENPAYIP 545
>pdb|3UMA|A Chain A, Crystal Structure Of A Hypothetical Peroxiredoxin
Protein Frm Sinorhizobium Meliloti
pdb|3UMA|B Chain B, Crystal Structure Of A Hypothetical Peroxiredoxin
Protein Frm Sinorhizobium Meliloti
pdb|3UMA|C Chain C, Crystal Structure Of A Hypothetical Peroxiredoxin
Protein Frm Sinorhizobium Meliloti
Length = 184
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 4 LTIGDSVPN--LQVQTNQGNFKLHD---FIGDNWTIIFSHPGDFTPVCTTELGKMAAYVP 58
+ +GD +PN + +T G ++ F G ++F+ PG FTP C+ ++P
Sbjct: 26 IAVGDKLPNATFKEKTADGPVEVTTELLFKGKR-VVLFAVPGAFTPTCSLN------HLP 78
Query: 59 EFDKREVKLLGLSCDDV 75
+ + +L DD+
Sbjct: 79 GYLENRDAILARGVDDI 95
>pdb|1SQ9|A Chain A, Structure Of Ski8p, A Wd Repeat Protein Involved In Mrna
Degradation And Meiotic Recombination
Length = 397
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/71 (19%), Positives = 28/71 (39%)
Query: 6 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREV 65
G+ + +L V T+ L +F +W + S +C+ + K +
Sbjct: 267 FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI 326
Query: 66 KLLGLSCDDVK 76
L + CDD++
Sbjct: 327 TTLNMHCDDIE 337
>pdb|4GMV|A Chain A, Crystal Structure Of The Coiled-Coil, Ra And Ph Domains Of
Lamellipodin
pdb|4GMV|B Chain B, Crystal Structure Of The Coiled-Coil, Ra And Ph Domains Of
Lamellipodin
Length = 281
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 27 FIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDI 85
+ G ++ + P D+ V P+ K+ + L CDDV++ ++W+ I
Sbjct: 212 YYGQDYRNKYKAPTDYCLVLKH---------PQIQKKSQYIKYLCCDDVRTLHQWVNGI 261
>pdb|3DHT|A Chain A, The Crystal Structure Determination Of Rat (Rattus
Norvegicus) Hemoglobin
pdb|3HF4|A Chain A, Crystal Structure Of Rat Methemoglobin In R2 State
pdb|3HF4|E Chain E, Crystal Structure Of Rat Methemoglobin In R2 State
Length = 141
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 33 TIIFSHPGDFTPVCTTELGKMAAYV 57
T+ HPGDFTP L K A V
Sbjct: 108 TLACHHPGDFTPAMHASLDKFLASV 132
>pdb|4GN1|A Chain A, Crystal Structure Of The Ra And Ph Domains Of Lamellipodin
pdb|4GN1|B Chain B, Crystal Structure Of The Ra And Ph Domains Of Lamellipodin
pdb|4GN1|C Chain C, Crystal Structure Of The Ra And Ph Domains Of Lamellipodin
pdb|4GN1|D Chain D, Crystal Structure Of The Ra And Ph Domains Of Lamellipodin
Length = 255
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 27 FIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIE 86
+ G ++ + P D+ V P+ K+ + L CDDV++ ++W+ I
Sbjct: 186 YYGQDYRNKYKAPTDYCLVLKH---------PQIQKKSQYIKYLCCDDVRTLHQWVNGIR 236
>pdb|1S4U|X Chain X, Crystal Structure Analysis Of The Beta-Propeller Protein
Ski8p
Length = 407
Score = 26.2 bits (56), Expect = 6.0, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 7 GDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVK 66
G+ + +L V T+ L +F +W + S +C+ + K +
Sbjct: 278 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT 337
Query: 67 LLGLSCDDVKSHNEWIKDIEAYTPIIADP 95
L + CDD++ + I ++ + +A+P
Sbjct: 338 TLNMHCDDIEIEED-ILAVDEHGDSLAEP 365
>pdb|3GDJ|A Chain A, Crystal Structure Determination Of Camel(Camelus
Dromedarius)hemoglobin At 2 Angstrom Resolution
pdb|3GDJ|C Chain C, Crystal Structure Determination Of Camel(Camelus
Dromedarius)hemoglobin At 2 Angstrom Resolution
Length = 141
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 33 TIIFSHPGDFTPVCTTELGKMAAYV 57
T+ HPGDFTP L K A V
Sbjct: 108 TVAAHHPGDFTPSVHASLDKFLANV 132
>pdb|4AXI|A Chain A, Structure Of The Clostridium Difficile Euts Protein
pdb|4AXI|B Chain B, Structure Of The Clostridium Difficile Euts Protein
Length = 125
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 9/39 (23%)
Query: 85 IEAYTP--------IIADPNREIIKQLNMVDPDEKDSSG 115
I+ Y P IIA+PN +I K+L +V D+KD+ G
Sbjct: 11 IQEYVPGKQVTLAHIIANPNEDIYKKLGLV-LDKKDAIG 48
>pdb|2KQ9|A Chain A, Solution Structure Of Dnak Suppressor Protein From
Agrobacterium Tumefaciens C58. Northeast Structural
Genomics Consortium Target Att12ONTARIO CENTER FOR
STRUCTURAL PROTEOMICS TARGET ATC0888
Length = 112
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 84 DIEAYTPIIADPNREIIKQLNMVDPD 109
++E+Y I+ D RE+ ++L+ ++ D
Sbjct: 8 NVESYEKILRDRQRELYRRLHKIEAD 33
>pdb|2XHF|A Chain A, Crystal Structure Of Peroxiredoxin 5 From Alvinella
Pompejana
pdb|2XHF|B Chain B, Crystal Structure Of Peroxiredoxin 5 From Alvinella
Pompejana
Length = 171
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 4 LTIGDSVPNLQVQTN--QGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFD 61
+ +GD +P++ V + +F +HD I+FS G F P + + + +F
Sbjct: 14 IKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFK 73
Query: 62 KREVKLLG-LSCDDVKSHNEWIKDI--EAYTPIIADPNREIIKQLNMVDPDEKDSS 114
+ + ++ +D W K + E ++AD + E + L E DSS
Sbjct: 74 EEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGT----ELDSS 125
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,665,162
Number of Sequences: 62578
Number of extensions: 197129
Number of successful extensions: 521
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 437
Number of HSP's gapped (non-prelim): 82
length of query: 133
length of database: 14,973,337
effective HSP length: 88
effective length of query: 45
effective length of database: 9,466,473
effective search space: 425991285
effective search space used: 425991285
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)