Query 044272
Match_columns 133
No_of_seqs 121 out of 1384
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 22:55:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 8.6E-37 3E-41 199.0 11.2 129 3-133 3-132 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 1.3E-37 4.3E-42 204.4 5.4 129 3-133 4-134 (164)
3 3gkn_A Bacterioferritin comigr 100.0 9.8E-34 3.4E-38 184.8 13.1 132 1-133 4-138 (163)
4 3ixr_A Bacterioferritin comigr 100.0 6.1E-34 2.1E-38 189.1 10.6 130 3-133 20-154 (179)
5 3sbc_A Peroxiredoxin TSA1; alp 100.0 1.4E-33 4.9E-38 191.4 12.5 123 4-133 23-156 (216)
6 3mng_A Peroxiredoxin-5, mitoch 100.0 1.8E-33 6.1E-38 186.1 11.8 130 3-133 14-150 (173)
7 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 6.5E-33 2.2E-37 182.5 13.1 130 1-133 1-136 (167)
8 3drn_A Peroxiredoxin, bacterio 100.0 2.4E-32 8.3E-37 178.3 14.4 121 4-133 2-124 (161)
9 3tue_A Tryparedoxin peroxidase 100.0 9.9E-33 3.4E-37 187.6 12.6 123 4-133 26-160 (219)
10 1prx_A HORF6; peroxiredoxin, h 100.0 2.9E-32 9.8E-37 186.9 14.6 131 3-133 4-144 (224)
11 2v2g_A Peroxiredoxin 6; oxidor 100.0 8.4E-33 2.9E-37 190.5 11.5 131 1-133 1-140 (233)
12 1tp9_A Peroxiredoxin, PRX D (t 100.0 2E-32 6.9E-37 179.1 12.4 129 1-133 1-140 (162)
13 3uma_A Hypothetical peroxiredo 100.0 9.1E-33 3.1E-37 184.3 10.6 130 1-133 23-161 (184)
14 1xcc_A 1-Cys peroxiredoxin; un 100.0 2.2E-32 7.6E-37 187.0 11.0 131 1-133 1-141 (220)
15 3p7x_A Probable thiol peroxida 100.0 8E-32 2.7E-36 176.6 13.0 121 3-133 19-142 (166)
16 1psq_A Probable thiol peroxida 100.0 1.4E-31 4.7E-36 175.1 14.0 122 3-133 15-139 (163)
17 2c0d_A Thioredoxin peroxidase 100.0 1.1E-31 3.9E-36 183.6 13.4 126 1-133 22-159 (221)
18 1q98_A Thiol peroxidase, TPX; 100.0 5.7E-32 1.9E-36 177.3 11.0 125 3-133 16-143 (165)
19 3zrd_A Thiol peroxidase; oxido 100.0 8.4E-32 2.9E-36 181.7 10.8 125 3-133 51-178 (200)
20 3qpm_A Peroxiredoxin; oxidored 100.0 2.7E-31 9.3E-36 183.8 13.0 124 3-133 47-181 (240)
21 3tjj_A Peroxiredoxin-4; thiore 100.0 2.7E-31 9.1E-36 185.1 12.7 125 2-133 60-195 (254)
22 2yzh_A Probable thiol peroxida 100.0 6.3E-31 2.1E-35 173.1 13.4 124 3-133 20-146 (171)
23 1n8j_A AHPC, alkyl hydroperoxi 100.0 4.2E-31 1.4E-35 176.4 12.7 122 5-133 2-131 (186)
24 2pn8_A Peroxiredoxin-4; thiore 100.0 3.4E-31 1.2E-35 180.1 12.3 124 3-133 18-152 (211)
25 2bmx_A Alkyl hydroperoxidase C 100.0 1.5E-30 5.1E-35 174.6 13.7 125 1-133 1-145 (195)
26 1xvw_A Hypothetical protein RV 100.0 2.1E-30 7E-35 168.5 13.6 123 4-133 9-135 (160)
27 3keb_A Probable thiol peroxida 100.0 2.9E-30 1E-34 176.2 14.3 122 3-133 21-150 (224)
28 3ztl_A Thioredoxin peroxidase; 100.0 1.6E-30 5.6E-35 177.9 12.6 124 3-133 39-173 (222)
29 1uul_A Tryparedoxin peroxidase 100.0 3.2E-30 1.1E-34 173.9 13.6 125 2-133 4-140 (202)
30 2a4v_A Peroxiredoxin DOT5; yea 100.0 9.2E-31 3.1E-35 170.4 10.6 122 3-133 6-130 (159)
31 2i81_A 2-Cys peroxiredoxin; st 100.0 2.4E-30 8.2E-35 176.1 12.9 124 3-133 20-155 (213)
32 1zye_A Thioredoxin-dependent p 100.0 8.3E-30 2.9E-34 174.2 13.3 124 3-133 26-160 (220)
33 1nm3_A Protein HI0572; hybrid, 100.0 5.2E-30 1.8E-34 177.1 12.0 128 1-133 1-137 (241)
34 3a2v_A Probable peroxiredoxin; 100.0 9E-30 3.1E-34 176.7 12.9 125 4-133 5-137 (249)
35 2h01_A 2-Cys peroxiredoxin; th 100.0 1.1E-29 3.7E-34 170.0 12.5 122 5-133 1-134 (192)
36 1qmv_A Human thioredoxin perox 100.0 2.2E-29 7.4E-34 169.2 13.1 124 3-133 4-138 (197)
37 1we0_A Alkyl hydroperoxide red 100.0 2.4E-29 8.2E-34 167.6 12.7 123 4-133 1-132 (187)
38 3u5r_E Uncharacterized protein 100.0 1.7E-29 5.8E-34 172.3 12.1 117 3-133 31-157 (218)
39 1zof_A Alkyl hydroperoxide-red 100.0 1.8E-29 6.2E-34 169.6 11.9 123 4-133 1-136 (198)
40 3ewl_A Uncharacterized conserv 100.0 4.7E-29 1.6E-33 158.9 13.1 115 5-133 2-123 (142)
41 2xhf_A Peroxiredoxin 5; oxidor 100.0 1.6E-29 5.6E-34 166.4 11.0 129 3-133 13-146 (171)
42 4f82_A Thioredoxin reductase; 100.0 3.3E-29 1.1E-33 165.4 12.0 128 4-133 10-152 (176)
43 3fw2_A Thiol-disulfide oxidore 100.0 8.1E-29 2.8E-33 159.4 12.6 118 2-133 3-130 (150)
44 2lrn_A Thiol:disulfide interch 100.0 1.3E-28 4.4E-33 158.9 13.4 118 1-133 1-123 (152)
45 4fo5_A Thioredoxin-like protei 100.0 3.7E-29 1.3E-33 159.9 10.4 116 3-133 6-127 (143)
46 2pwj_A Mitochondrial peroxired 100.0 4.3E-29 1.5E-33 164.7 10.8 127 5-133 8-148 (171)
47 3eur_A Uncharacterized protein 100.0 1.4E-28 4.8E-33 157.0 12.2 117 3-133 4-127 (142)
48 3gl3_A Putative thiol:disulfid 100.0 4.5E-28 1.5E-32 155.9 14.6 117 1-133 1-119 (152)
49 1xvq_A Thiol peroxidase; thior 100.0 4.6E-29 1.6E-33 164.8 9.8 124 3-133 17-142 (175)
50 1xiy_A Peroxiredoxin, pfaop; a 100.0 6.5E-29 2.2E-33 165.2 10.3 128 4-133 1-148 (182)
51 4eo3_A Bacterioferritin comigr 100.0 1E-28 3.5E-33 177.2 12.0 112 9-133 3-115 (322)
52 2jsy_A Probable thiol peroxida 100.0 5.3E-29 1.8E-33 163.0 8.3 122 3-133 17-141 (167)
53 3kcm_A Thioredoxin family prot 100.0 2E-27 6.7E-32 153.1 13.7 116 4-133 2-120 (154)
54 3fkf_A Thiol-disulfide oxidore 100.0 1.1E-27 3.9E-32 153.0 11.8 118 2-133 3-128 (148)
55 1xzo_A BSSCO, hypothetical pro 100.0 1E-27 3.6E-32 157.4 11.9 128 3-133 6-149 (174)
56 2cvb_A Probable thiol-disulfid 100.0 1.3E-27 4.5E-32 159.0 12.5 116 3-133 6-130 (188)
57 3hcz_A Possible thiol-disulfid 100.0 6.3E-28 2.2E-32 154.2 10.5 117 3-133 4-125 (148)
58 3eyt_A Uncharacterized protein 100.0 5.7E-28 2E-32 156.4 10.2 115 5-133 1-131 (158)
59 2ywi_A Hypothetical conserved 100.0 1.7E-27 5.8E-32 159.2 12.8 117 3-133 17-144 (196)
60 3lor_A Thiol-disulfide isomera 100.0 6.8E-28 2.3E-32 156.2 10.4 118 1-133 1-134 (160)
61 2f9s_A Thiol-disulfide oxidore 100.0 2.3E-27 7.9E-32 152.6 12.7 115 5-133 1-117 (151)
62 3lwa_A Secreted thiol-disulfid 100.0 3.6E-27 1.2E-31 156.3 13.7 119 4-133 31-160 (183)
63 2l5o_A Putative thioredoxin; s 99.9 8.9E-27 3E-31 149.9 13.8 115 5-133 3-120 (153)
64 2gs3_A PHGPX, GPX-4, phospholi 99.9 1.7E-27 5.8E-32 158.5 10.6 130 1-133 20-165 (185)
65 2lrt_A Uncharacterized protein 99.9 6.3E-27 2.1E-31 151.3 12.5 114 4-133 9-127 (152)
66 1jfu_A Thiol:disulfide interch 99.9 5.1E-27 1.7E-31 155.9 11.6 121 3-133 33-157 (186)
67 2v1m_A Glutathione peroxidase; 99.9 4.6E-27 1.6E-31 153.5 11.1 122 3-133 4-146 (169)
68 2lja_A Putative thiol-disulfid 99.9 1.2E-26 4.1E-31 149.1 12.8 118 1-133 1-122 (152)
69 4hde_A SCO1/SENC family lipopr 99.9 2.7E-26 9.2E-31 151.1 14.5 126 4-133 6-147 (170)
70 3hdc_A Thioredoxin family prot 99.9 2.8E-27 9.7E-32 153.5 9.6 115 3-133 14-129 (158)
71 3me7_A Putative uncharacterize 99.9 1.1E-26 3.6E-31 153.0 12.3 124 5-133 2-140 (170)
72 2vup_A Glutathione peroxidase- 99.9 2.9E-27 9.9E-32 158.0 9.6 125 1-133 19-164 (190)
73 2obi_A PHGPX, GPX-4, phospholi 99.9 6.5E-27 2.2E-31 155.3 10.8 128 3-133 20-163 (183)
74 2p31_A CL683, glutathione pero 99.9 2.9E-27 9.9E-32 156.9 8.7 117 3-133 22-160 (181)
75 3or5_A Thiol:disulfide interch 99.9 4.8E-26 1.6E-30 148.0 14.2 122 3-133 7-130 (165)
76 3kh7_A Thiol:disulfide interch 99.9 3.9E-26 1.3E-30 150.9 13.9 114 2-133 28-146 (176)
77 3erw_A Sporulation thiol-disul 99.9 2.4E-26 8.3E-31 146.2 12.3 116 3-133 8-128 (145)
78 2b5x_A YKUV protein, TRXY; thi 99.9 3.3E-26 1.1E-30 146.0 11.5 115 4-133 1-124 (148)
79 3ia1_A THIO-disulfide isomeras 99.9 1.6E-26 5.5E-31 148.9 9.8 113 3-133 4-123 (154)
80 2p5q_A Glutathione peroxidase 99.9 4E-26 1.4E-30 149.2 10.9 118 4-133 6-147 (170)
81 2ggt_A SCO1 protein homolog, m 99.9 1.4E-25 4.6E-30 145.8 12.3 123 9-133 2-140 (164)
82 3ha9_A Uncharacterized thiored 99.9 2.4E-26 8.1E-31 149.9 8.6 113 4-133 11-144 (165)
83 3dwv_A Glutathione peroxidase- 99.9 6.1E-27 2.1E-31 156.1 5.7 120 3-133 19-162 (187)
84 2f8a_A Glutathione peroxidase 99.9 2.2E-25 7.4E-30 151.2 13.2 88 5-94 21-124 (208)
85 3kij_A Probable glutathione pe 99.9 6.4E-26 2.2E-30 150.2 9.8 117 5-133 13-149 (180)
86 2b7k_A SCO1 protein; metalloch 99.9 2.4E-25 8.3E-30 149.9 12.7 128 4-133 13-158 (200)
87 2hyx_A Protein DIPZ; thioredox 99.9 2.1E-25 7.1E-30 161.6 12.5 117 3-133 50-178 (352)
88 3raz_A Thioredoxin-related pro 99.9 2.1E-25 7.2E-30 143.5 11.1 112 10-133 3-119 (151)
89 1zzo_A RV1677; thioredoxin fol 99.9 5.9E-25 2E-29 138.2 12.7 112 6-133 1-115 (136)
90 1i5g_A Tryparedoxin II; electr 99.9 2E-25 6.7E-30 142.6 10.2 114 6-133 3-123 (144)
91 3cmi_A Peroxiredoxin HYR1; thi 99.9 3.4E-26 1.2E-30 150.3 6.8 113 6-133 8-147 (171)
92 2rli_A SCO2 protein homolog, m 99.9 1.1E-24 3.9E-29 142.4 13.9 121 11-133 7-143 (171)
93 2b1k_A Thiol:disulfide interch 99.9 9.7E-25 3.3E-29 142.6 13.3 115 2-133 20-139 (168)
94 1lu4_A Soluble secreted antige 99.9 7.3E-25 2.5E-29 138.1 12.0 110 8-133 2-113 (136)
95 2ls5_A Uncharacterized protein 99.9 1.9E-27 6.5E-32 154.3 0.0 119 3-133 6-128 (159)
96 2i3y_A Epididymal secretory gl 99.9 1.1E-24 3.9E-29 148.3 12.8 88 5-95 30-133 (215)
97 4evm_A Thioredoxin family prot 99.9 1.7E-24 5.6E-29 136.1 12.2 110 9-133 1-118 (138)
98 2k6v_A Putative cytochrome C o 99.9 4.2E-25 1.4E-29 144.5 8.9 125 5-133 11-150 (172)
99 2r37_A Glutathione peroxidase 99.9 2E-24 6.8E-29 146.4 12.3 88 5-95 12-115 (207)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.9 8.1E-25 2.8E-29 140.1 9.4 115 5-133 3-123 (146)
101 1o73_A Tryparedoxin; electron 99.9 1.6E-24 5.4E-29 138.2 8.3 115 5-133 3-123 (144)
102 3s9f_A Tryparedoxin; thioredox 99.9 3E-25 1E-29 145.3 4.8 116 4-133 22-143 (165)
103 1kng_A Thiol:disulfide interch 99.9 1.3E-23 4.4E-28 135.3 11.4 114 3-133 7-131 (156)
104 2h30_A Thioredoxin, peptide me 99.9 7E-24 2.4E-28 137.7 6.9 106 14-133 22-135 (164)
105 2lus_A Thioredoxion; CR-Trp16, 99.8 4.6E-25 1.6E-29 140.3 0.0 112 8-133 2-122 (143)
106 4h86_A Peroxiredoxin type-2; o 99.7 2.7E-16 9.1E-21 104.7 9.7 126 4-133 26-175 (199)
107 2fwh_A Thiol:disulfide interch 99.6 3E-16 1E-20 99.0 4.4 97 4-133 4-105 (134)
108 2l57_A Uncharacterized protein 99.6 1.9E-15 6.6E-20 94.0 6.4 91 8-132 4-95 (126)
109 2ju5_A Thioredoxin disulfide i 99.5 3.4E-15 1.2E-19 96.3 3.5 101 6-133 26-130 (154)
110 3hxs_A Thioredoxin, TRXP; elec 99.5 3.2E-13 1.1E-17 85.3 8.8 80 17-132 38-118 (141)
111 3ul3_B Thioredoxin, thioredoxi 99.4 5.5E-13 1.9E-17 83.2 8.0 88 6-132 20-108 (128)
112 3fk8_A Disulphide isomerase; A 99.4 1E-12 3.5E-17 82.3 8.3 75 29-132 28-104 (133)
113 3f9u_A Putative exported cytoc 99.4 2.1E-14 7.2E-19 93.9 -2.5 97 22-133 40-144 (172)
114 2kuc_A Putative disulphide-iso 99.3 1.9E-12 6.6E-17 80.5 6.3 78 21-132 19-99 (130)
115 2l5l_A Thioredoxin; structural 99.3 8E-12 2.7E-16 78.6 8.3 69 29-132 37-105 (136)
116 3p2a_A Thioredoxin 2, putative 99.3 1.1E-11 3.6E-16 79.0 7.6 91 5-132 30-121 (148)
117 2pu9_C TRX-F, thioredoxin F-ty 99.3 1.3E-11 4.4E-16 74.8 7.5 68 29-132 23-90 (111)
118 2voc_A Thioredoxin; electron t 99.3 1.7E-11 5.7E-16 74.6 7.2 68 29-132 16-83 (112)
119 3cxg_A Putative thioredoxin; m 99.3 8.8E-12 3E-16 78.3 5.9 73 21-131 32-105 (133)
120 3qfa_C Thioredoxin; protein-pr 99.2 2E-11 6.9E-16 74.8 6.9 67 29-132 30-96 (116)
121 1z6n_A Hypothetical protein PA 99.2 4.6E-12 1.6E-16 82.9 4.0 76 23-132 48-123 (167)
122 1xfl_A Thioredoxin H1; AT3G510 99.2 1.3E-11 4.3E-16 76.7 5.9 84 11-132 17-103 (124)
123 2dj3_A Protein disulfide-isome 99.2 1.7E-11 5.9E-16 76.5 6.4 88 11-132 5-94 (133)
124 3d6i_A Monothiol glutaredoxin- 99.2 3.8E-11 1.3E-15 72.8 7.7 69 29-132 20-88 (112)
125 2vlu_A Thioredoxin, thioredoxi 99.2 1.6E-11 5.6E-16 75.5 5.4 92 4-132 6-99 (122)
126 1nsw_A Thioredoxin, TRX; therm 99.2 4.6E-11 1.6E-15 71.4 7.3 68 29-132 16-83 (105)
127 3f3q_A Thioredoxin-1; His TAG, 99.2 6E-11 2.1E-15 71.8 7.4 67 29-132 23-89 (109)
128 1faa_A Thioredoxin F; electron 99.2 4.5E-11 1.5E-15 73.7 6.9 68 29-132 36-103 (124)
129 1thx_A Thioredoxin, thioredoxi 99.2 6.6E-11 2.3E-15 71.7 7.6 68 29-132 24-91 (115)
130 3zzx_A Thioredoxin; oxidoreduc 99.2 2.1E-11 7.2E-16 73.8 5.1 71 24-132 15-85 (105)
131 1sen_A Thioredoxin-like protei 99.2 2.4E-12 8.1E-17 83.8 0.7 90 11-133 28-117 (164)
132 1t00_A Thioredoxin, TRX; redox 99.2 8.5E-11 2.9E-15 71.1 7.5 68 29-132 22-89 (112)
133 3d22_A TRXH4, thioredoxin H-ty 99.2 2.9E-11 1E-15 76.1 5.6 67 29-132 45-111 (139)
134 3die_A Thioredoxin, TRX; elect 99.2 9.9E-11 3.4E-15 69.9 7.6 68 29-132 18-85 (106)
135 1w4v_A Thioredoxin, mitochondr 99.2 8.7E-11 3E-15 72.1 7.5 68 29-132 30-97 (119)
136 1dby_A Chloroplast thioredoxin 99.2 1.4E-10 4.8E-15 69.5 7.9 68 29-132 18-85 (107)
137 2j23_A Thioredoxin; immune pro 99.2 8E-11 2.7E-15 72.6 6.7 69 29-132 32-100 (121)
138 2dml_A Protein disulfide-isome 99.2 1.5E-10 5.1E-15 71.9 8.0 68 29-131 34-101 (130)
139 1ep7_A Thioredoxin CH1, H-type 99.2 1.2E-10 3.9E-15 70.5 7.3 67 30-132 24-90 (112)
140 2i4a_A Thioredoxin; acidophIle 99.2 1.4E-10 4.8E-15 69.4 7.4 68 29-132 19-86 (107)
141 1x5d_A Protein disulfide-isome 99.2 1.3E-10 4.6E-15 72.2 7.6 68 29-131 24-94 (133)
142 3gix_A Thioredoxin-like protei 99.2 6.6E-11 2.3E-15 75.8 6.2 68 29-132 22-89 (149)
143 2trx_A Thioredoxin; electron t 99.2 1.2E-10 4E-15 70.0 6.8 68 29-132 19-86 (108)
144 2wz9_A Glutaredoxin-3; protein 99.2 1.5E-10 5.3E-15 74.2 7.8 67 29-132 31-97 (153)
145 3tco_A Thioredoxin (TRXA-1); d 99.1 1.9E-10 6.4E-15 69.0 7.6 68 29-132 20-87 (109)
146 1fb6_A Thioredoxin M; electron 99.1 1.6E-10 5.3E-15 68.9 7.0 68 29-132 17-84 (105)
147 1x5e_A Thioredoxin domain cont 99.1 3E-10 1E-14 70.2 8.4 66 32-132 24-89 (126)
148 2xc2_A Thioredoxinn; oxidoredu 99.1 1.1E-10 3.7E-15 71.3 6.3 71 23-132 27-97 (117)
149 1wou_A Thioredoxin -related pr 99.1 1.2E-10 3.9E-15 72.1 6.4 76 29-132 23-105 (123)
150 2e0q_A Thioredoxin; electron t 99.1 2.3E-10 7.8E-15 67.9 7.3 67 29-132 15-81 (104)
151 3h79_A Thioredoxin-like protei 99.1 4.1E-10 1.4E-14 69.8 8.7 70 29-132 32-105 (127)
152 1gh2_A Thioredoxin-like protei 99.1 2.4E-10 8.3E-15 68.6 7.0 67 29-132 20-86 (107)
153 3aps_A DNAJ homolog subfamily 99.1 2.7E-10 9.4E-15 69.9 7.3 69 29-132 20-88 (122)
154 2yzu_A Thioredoxin; redox prot 99.1 3.4E-10 1.2E-14 67.7 7.4 68 29-132 17-84 (109)
155 2f51_A Thioredoxin; electron t 99.1 1.9E-10 6.4E-15 70.7 6.4 77 16-128 6-85 (118)
156 2oe3_A Thioredoxin-3; electron 99.1 2.6E-10 8.9E-15 69.7 6.9 67 29-132 29-95 (114)
157 4euy_A Uncharacterized protein 99.1 1E-10 3.5E-15 70.2 5.0 67 29-132 17-83 (105)
158 2dj1_A Protein disulfide-isome 99.1 2.1E-10 7.2E-15 72.0 6.5 68 29-131 33-102 (140)
159 2dj0_A Thioredoxin-related tra 99.1 2.1E-10 7.2E-15 72.1 6.4 75 29-132 25-99 (137)
160 3m9j_A Thioredoxin; oxidoreduc 99.1 3.8E-10 1.3E-14 67.3 7.2 67 29-132 19-85 (105)
161 3apq_A DNAJ homolog subfamily 99.1 1.5E-10 5.1E-15 77.9 6.0 84 12-132 96-180 (210)
162 1xwb_A Thioredoxin; dimerizati 99.1 5.1E-10 1.7E-14 66.8 7.7 68 29-132 19-86 (106)
163 2l6c_A Thioredoxin; oxidoreduc 99.1 2.8E-10 9.6E-15 69.0 6.6 67 29-132 18-84 (110)
164 2ppt_A Thioredoxin-2; thiredox 99.1 3.8E-10 1.3E-14 72.6 7.6 68 29-132 63-130 (155)
165 2o8v_B Thioredoxin 1; disulfid 99.1 1.1E-10 3.8E-15 72.8 4.9 68 29-132 39-106 (128)
166 2vm1_A Thioredoxin, thioredoxi 99.1 4.3E-10 1.5E-14 68.4 7.3 67 29-132 27-93 (118)
167 2vim_A Thioredoxin, TRX; thior 99.1 5.3E-10 1.8E-14 66.5 7.5 67 29-132 18-84 (104)
168 3gnj_A Thioredoxin domain prot 99.1 5.3E-10 1.8E-14 67.3 7.4 68 29-132 21-88 (111)
169 1r26_A Thioredoxin; redox-acti 99.1 4.3E-10 1.5E-14 69.9 7.0 67 29-132 36-102 (125)
170 2djj_A PDI, protein disulfide- 99.1 3.3E-10 1.1E-14 69.3 6.4 59 14-73 8-71 (121)
171 2lst_A Thioredoxin; structural 98.6 1.7E-11 5.6E-16 76.3 0.0 78 21-132 11-92 (130)
172 1ti3_A Thioredoxin H, PTTRXH1; 99.1 4.1E-10 1.4E-14 68.0 6.2 67 29-132 25-91 (113)
173 3qou_A Protein YBBN; thioredox 99.0 3.3E-10 1.1E-14 79.3 6.4 68 29-132 25-92 (287)
174 3emx_A Thioredoxin; structural 99.0 5.3E-11 1.8E-15 74.8 1.9 72 32-132 33-104 (135)
175 1syr_A Thioredoxin; SGPP, stru 99.0 9.1E-10 3.1E-14 66.7 7.3 67 29-132 25-91 (112)
176 3hz4_A Thioredoxin; NYSGXRC, P 99.0 7.9E-10 2.7E-14 69.8 7.1 68 29-132 23-90 (140)
177 2i1u_A Thioredoxin, TRX, MPT46 99.0 1.1E-09 3.8E-14 66.9 7.6 68 29-132 29-96 (121)
178 3q6o_A Sulfhydryl oxidase 1; p 99.0 2.1E-09 7.1E-14 73.8 9.3 69 29-129 29-99 (244)
179 1qgv_A Spliceosomal protein U5 99.0 4.2E-10 1.4E-14 71.5 5.3 68 29-132 22-89 (142)
180 1zma_A Bacterocin transport ac 99.0 1.3E-09 4.5E-14 66.6 6.7 72 29-132 28-99 (118)
181 3idv_A Protein disulfide-isome 99.0 1.5E-09 5.2E-14 73.8 7.7 68 29-131 31-100 (241)
182 3uvt_A Thioredoxin domain-cont 99.0 9.6E-10 3.3E-14 66.1 5.7 68 30-132 21-90 (111)
183 3dxb_A Thioredoxin N-terminall 99.0 7E-10 2.4E-14 75.3 5.6 68 29-132 29-96 (222)
184 2yj7_A LPBCA thioredoxin; oxid 98.5 7.2E-11 2.4E-15 70.3 0.0 44 29-74 18-61 (106)
185 3t58_A Sulfhydryl oxidase 1; o 98.9 2.1E-09 7E-14 81.5 7.7 68 29-128 29-98 (519)
186 1mek_A Protein disulfide isome 98.9 3.6E-10 1.2E-14 68.7 2.9 69 29-132 23-93 (120)
187 1v98_A Thioredoxin; oxidoreduc 98.9 4.3E-09 1.5E-13 66.2 7.4 66 31-132 51-116 (140)
188 3ph9_A Anterior gradient prote 98.9 1.7E-09 5.7E-14 69.5 4.4 71 29-133 43-114 (151)
189 2dbc_A PDCL2, unnamed protein 98.9 3.3E-09 1.1E-13 66.6 5.5 63 30-132 30-92 (135)
190 1oaz_A Thioredoxin 1; immune s 98.9 2E-09 6.9E-14 66.6 4.4 68 29-132 20-101 (123)
191 1wmj_A Thioredoxin H-type; str 98.9 4E-10 1.4E-14 69.8 0.9 42 29-73 35-76 (130)
192 3ed3_A Protein disulfide-isome 98.9 1E-08 3.5E-13 72.6 8.2 68 29-129 34-101 (298)
193 1nho_A Probable thioredoxin; b 98.8 3.7E-09 1.3E-13 60.6 4.4 38 34-73 5-42 (85)
194 3kp8_A Vkorc1/thioredoxin doma 98.8 6.5E-10 2.2E-14 67.3 0.7 38 21-60 4-41 (106)
195 2qsi_A Putative hydrogenase ex 98.8 1E-08 3.4E-13 64.7 6.1 65 32-132 35-101 (137)
196 3ira_A Conserved protein; meth 98.8 2.4E-08 8E-13 65.5 8.0 82 22-132 32-117 (173)
197 2av4_A Thioredoxin-like protei 98.8 9.3E-09 3.2E-13 66.2 5.7 43 29-73 40-82 (160)
198 1fo5_A Thioredoxin; disulfide 98.8 5.1E-09 1.7E-13 60.0 4.1 40 32-73 4-43 (85)
199 1ilo_A Conserved hypothetical 98.8 1.9E-08 6.5E-13 56.6 6.2 36 34-71 3-38 (77)
200 2es7_A Q8ZP25_salty, putative 98.8 4.7E-09 1.6E-13 66.7 3.6 64 32-132 36-103 (142)
201 3iv4_A Putative oxidoreductase 98.8 3E-08 1E-12 60.4 6.8 70 30-132 24-93 (112)
202 2hls_A Protein disulfide oxido 98.7 5.1E-08 1.7E-12 67.1 8.4 44 29-73 137-183 (243)
203 1a8l_A Protein disulfide oxido 98.7 4.3E-08 1.5E-12 66.1 7.7 67 31-132 134-204 (226)
204 2qgv_A Hydrogenase-1 operon pr 98.7 1.1E-08 3.9E-13 64.7 4.1 69 29-132 33-103 (140)
205 1a0r_P Phosducin, MEKA, PP33; 98.7 6.5E-09 2.2E-13 71.8 3.1 42 29-73 132-173 (245)
206 3qcp_A QSOX from trypanosoma b 98.7 5.1E-08 1.7E-12 72.9 6.6 66 31-130 43-115 (470)
207 3idv_A Protein disulfide-isome 98.6 1.6E-07 5.3E-12 63.8 7.9 68 29-131 146-215 (241)
208 3f8u_A Protein disulfide-isome 98.6 4.1E-08 1.4E-12 73.3 5.4 69 29-132 369-438 (481)
209 2r2j_A Thioredoxin domain-cont 98.6 1.6E-07 5.3E-12 68.5 7.7 68 29-131 21-93 (382)
210 1sji_A Calsequestrin 2, calseq 98.6 1.1E-07 3.9E-12 68.4 6.8 44 29-74 27-77 (350)
211 2b5e_A Protein disulfide-isome 98.6 2.3E-07 8E-12 69.7 8.3 65 29-127 30-94 (504)
212 2trc_P Phosducin, MEKA, PP33; 98.5 5.5E-08 1.9E-12 65.9 3.6 42 29-73 119-160 (217)
213 2ywm_A Glutaredoxin-like prote 98.5 2.9E-07 1E-11 62.2 6.9 41 31-73 136-176 (229)
214 3evi_A Phosducin-like protein 98.5 1.1E-07 3.6E-12 58.6 4.2 40 31-73 24-63 (118)
215 3gyk_A 27KDA outer membrane pr 98.5 2.5E-07 8.5E-12 60.1 5.9 47 21-71 14-60 (175)
216 3apo_A DNAJ homolog subfamily 98.5 3.9E-07 1.4E-11 71.8 7.5 68 29-132 674-741 (780)
217 1eej_A Thiol:disulfide interch 98.4 4.3E-07 1.5E-11 61.3 6.3 39 29-72 85-123 (216)
218 3f8u_A Protein disulfide-isome 98.4 6E-07 2.1E-11 67.0 7.5 65 31-131 22-86 (481)
219 3apo_A DNAJ homolog subfamily 98.4 5.2E-07 1.8E-11 71.1 7.2 44 29-74 454-497 (780)
220 3ga4_A Dolichyl-diphosphooligo 98.4 2.3E-06 7.9E-11 56.2 8.9 44 30-73 37-90 (178)
221 3uem_A Protein disulfide-isome 98.3 5.6E-07 1.9E-11 64.8 5.4 44 29-73 266-310 (361)
222 2dlx_A UBX domain-containing p 98.3 2.6E-06 8.9E-11 54.7 7.9 70 29-131 41-114 (153)
223 2b5e_A Protein disulfide-isome 98.3 2.3E-07 8E-12 69.7 3.4 43 29-72 375-419 (504)
224 3hd5_A Thiol:disulfide interch 98.3 1.5E-06 5E-11 57.5 6.7 43 29-73 24-66 (195)
225 3dml_A Putative uncharacterize 98.2 5.8E-07 2E-11 55.1 2.5 71 29-132 17-88 (116)
226 2k8s_A Thioredoxin; dimer, str 98.2 1.8E-06 6.1E-11 49.0 4.3 33 38-73 7-39 (80)
227 2znm_A Thiol:disulfide interch 98.2 1.8E-06 6.1E-11 56.9 4.5 41 30-72 22-62 (195)
228 2e7p_A Glutaredoxin; thioredox 98.2 2.7E-06 9.1E-11 51.4 4.7 38 29-73 18-55 (116)
229 3h93_A Thiol:disulfide interch 98.1 7.4E-06 2.5E-10 53.9 6.5 41 29-71 24-64 (192)
230 1z6m_A Conserved hypothetical 98.0 3.5E-05 1.2E-09 49.8 8.5 51 20-72 18-69 (175)
231 2ywm_A Glutaredoxin-like prote 98.0 2.6E-05 8.8E-10 52.5 7.7 42 31-72 21-67 (229)
232 1a8l_A Protein disulfide oxido 98.0 2.2E-05 7.5E-10 52.7 7.3 41 32-74 23-64 (226)
233 1t3b_A Thiol:disulfide interch 98.0 1.8E-05 6E-10 53.2 6.7 37 30-71 86-122 (211)
234 3us3_A Calsequestrin-1; calciu 98.0 3E-05 1E-09 56.1 7.9 45 29-74 29-79 (367)
235 2rem_A Disulfide oxidoreductas 97.9 2.7E-05 9.2E-10 51.1 6.3 39 31-71 26-64 (193)
236 1v58_A Thiol:disulfide interch 97.9 5.3E-05 1.8E-09 51.8 7.2 39 29-71 96-134 (241)
237 1hyu_A AHPF, alkyl hydroperoxi 97.8 5.5E-05 1.9E-09 57.2 7.5 40 32-73 118-157 (521)
238 1ego_A Glutaredoxin; electron 97.8 4E-05 1.4E-09 43.5 5.2 35 37-73 5-39 (85)
239 2djk_A PDI, protein disulfide- 97.7 0.00013 4.6E-09 45.1 6.1 42 29-73 22-63 (133)
240 1ttz_A Conserved hypothetical 97.5 0.00011 3.8E-09 42.5 4.2 22 37-58 5-26 (87)
241 1wjk_A C330018D20RIK protein; 97.5 0.00016 5.6E-09 42.7 4.9 56 30-92 15-70 (100)
242 1h75_A Glutaredoxin-like prote 97.5 0.0004 1.4E-08 38.9 5.9 49 37-92 5-54 (81)
243 1r7h_A NRDH-redoxin; thioredox 97.3 0.001 3.5E-08 36.4 5.8 50 37-93 5-55 (75)
244 3uem_A Protein disulfide-isome 97.2 0.0016 5.5E-08 46.6 8.1 40 33-73 137-176 (361)
245 2fgx_A Putative thioredoxin; N 97.2 0.00069 2.4E-08 40.7 4.8 52 35-92 32-83 (107)
246 3kp9_A Vkorc1/thioredoxin doma 97.1 0.00053 1.8E-08 48.3 4.1 38 21-60 189-226 (291)
247 2klx_A Glutaredoxin; thioredox 97.0 0.0041 1.4E-07 35.4 7.0 41 37-85 10-50 (89)
248 2c0g_A ERP29 homolog, windbeut 97.0 0.0057 2E-07 42.1 8.8 41 29-73 32-75 (248)
249 3hz8_A Thiol:disulfide interch 96.9 0.0012 4E-08 43.5 4.5 42 29-72 23-64 (193)
250 1kte_A Thioltransferase; redox 96.9 0.0017 5.7E-08 38.2 4.8 22 38-59 17-38 (105)
251 1un2_A DSBA, thiol-disulfide i 96.8 0.00051 1.8E-08 45.6 2.1 43 29-73 112-157 (197)
252 3qmx_A Glutaredoxin A, glutare 96.5 0.0086 2.9E-07 35.1 5.8 40 38-84 21-61 (99)
253 1fov_A Glutaredoxin 3, GRX3; a 96.5 0.01 3.6E-07 32.8 5.8 48 38-92 6-55 (82)
254 2hze_A Glutaredoxin-1; thiored 96.4 0.0074 2.5E-07 36.1 5.2 22 34-56 21-42 (114)
255 2yan_A Glutaredoxin-3; oxidore 96.4 0.011 3.8E-07 34.8 5.8 40 41-87 30-70 (105)
256 3gv1_A Disulfide interchange p 96.4 0.02 6.8E-07 36.1 7.2 35 29-70 13-47 (147)
257 3l9v_A Putative thiol-disulfid 96.3 0.0025 8.7E-08 41.7 3.1 48 23-72 7-57 (189)
258 2hls_A Protein disulfide oxido 96.3 0.011 3.6E-07 40.3 6.2 43 31-74 26-74 (243)
259 2khp_A Glutaredoxin; thioredox 96.3 0.02 6.9E-07 32.5 6.6 48 38-92 11-60 (92)
260 2lqo_A Putative glutaredoxin R 96.3 0.015 5.2E-07 33.7 6.0 40 38-84 9-49 (92)
261 2cq9_A GLRX2 protein, glutared 96.2 0.02 6.9E-07 35.1 6.7 44 38-88 32-79 (130)
262 3rhb_A ATGRXC5, glutaredoxin-C 96.1 0.018 6E-07 34.3 5.8 19 38-56 24-42 (113)
263 1wik_A Thioredoxin-like protei 96.1 0.053 1.8E-06 32.1 7.7 57 29-93 13-75 (109)
264 3c1r_A Glutaredoxin-1; oxidize 96.0 0.02 6.8E-07 34.6 5.8 32 38-73 30-62 (118)
265 2qc7_A ERP31, ERP28, endoplasm 96.0 0.0089 3E-07 40.9 4.5 40 29-73 21-63 (240)
266 3h8q_A Thioredoxin reductase 3 95.8 0.046 1.6E-06 32.7 6.7 44 38-88 22-69 (114)
267 3feu_A Putative lipoprotein; a 95.8 0.011 3.8E-07 38.5 4.1 38 30-71 22-59 (185)
268 2ht9_A Glutaredoxin-2; thiored 95.8 0.028 9.5E-07 35.4 5.8 19 38-56 54-72 (146)
269 3nzn_A Glutaredoxin; structura 95.7 0.035 1.2E-06 32.5 5.6 19 38-56 27-45 (103)
270 3ic4_A Glutaredoxin (GRX-1); s 95.6 0.04 1.4E-06 31.2 5.6 19 38-56 17-35 (92)
271 3msz_A Glutaredoxin 1; alpha-b 95.5 0.078 2.7E-06 29.6 6.5 22 35-56 6-27 (89)
272 1pn0_A Phenol 2-monooxygenase; 95.3 0.39 1.3E-05 37.4 11.8 118 4-132 479-625 (665)
273 1aba_A Glutaredoxin; electron 95.3 0.15 5.2E-06 28.6 7.4 45 37-88 4-58 (87)
274 4dvc_A Thiol:disulfide interch 95.2 0.036 1.2E-06 35.4 4.9 47 22-70 13-59 (184)
275 3ctg_A Glutaredoxin-2; reduced 95.2 0.064 2.2E-06 32.9 5.8 19 38-56 42-61 (129)
276 2wci_A Glutaredoxin-4; redox-a 94.7 0.11 3.7E-06 32.3 5.9 50 31-88 35-89 (135)
277 3l9s_A Thiol:disulfide interch 94.6 0.035 1.2E-06 36.4 3.8 48 22-71 13-63 (191)
278 2dkh_A 3-hydroxybenzoate hydro 94.3 0.16 5.4E-06 39.3 7.4 117 4-132 467-617 (639)
279 2ct6_A SH3 domain-binding glut 94.2 0.26 8.8E-06 29.2 6.7 47 37-84 12-59 (111)
280 3fz4_A Putative arsenate reduc 93.7 0.46 1.6E-05 28.7 7.3 64 35-105 5-72 (120)
281 3l78_A Regulatory protein SPX; 93.7 0.3 1E-05 29.5 6.4 64 35-105 2-69 (120)
282 1z3e_A Regulatory protein SPX; 93.6 0.31 1.1E-05 29.9 6.5 63 36-105 4-70 (132)
283 3c7m_A Thiol:disulfide interch 93.3 0.11 3.8E-06 33.4 4.3 41 30-72 17-58 (195)
284 2wem_A Glutaredoxin-related pr 93.3 0.31 1E-05 29.4 5.9 49 25-81 14-67 (118)
285 3gkx_A Putative ARSC family re 93.1 0.39 1.3E-05 29.0 6.1 64 35-105 6-73 (120)
286 3gx8_A Monothiol glutaredoxin- 92.9 0.43 1.5E-05 28.8 6.2 52 29-88 14-73 (121)
287 1t1v_A SH3BGRL3, SH3 domain-bi 92.7 0.48 1.6E-05 26.9 6.0 42 38-86 7-55 (93)
288 3zyw_A Glutaredoxin-3; metal b 92.6 0.46 1.6E-05 28.2 6.0 51 28-87 13-69 (111)
289 3ipz_A Monothiol glutaredoxin- 92.4 0.59 2E-05 27.5 6.2 37 29-73 16-56 (109)
290 3rdw_A Putative arsenate reduc 92.3 0.53 1.8E-05 28.4 6.0 65 35-106 7-76 (121)
291 3q6o_A Sulfhydryl oxidase 1; p 92.2 0.27 9.4E-06 33.0 5.2 31 90-132 188-218 (244)
292 3gha_A Disulfide bond formatio 92.2 0.26 8.8E-06 32.4 4.9 43 29-72 28-72 (202)
293 3tdg_A DSBG, putative uncharac 92.1 0.34 1.2E-05 33.7 5.5 39 30-72 147-185 (273)
294 1s3c_A Arsenate reductase; ARS 91.7 0.39 1.3E-05 29.9 5.0 64 36-106 5-72 (141)
295 3gn3_A Putative protein-disulf 91.5 0.15 5.1E-06 33.1 3.0 40 32-71 15-54 (182)
296 3f0i_A Arsenate reductase; str 91.4 0.68 2.3E-05 27.9 5.8 65 35-106 6-75 (119)
297 3ihg_A RDME; flavoenzyme, anth 91.3 1.4 4.7E-05 33.1 8.5 89 4-132 420-510 (535)
298 1rw1_A Conserved hypothetical 91.0 0.78 2.7E-05 27.3 5.7 44 36-86 3-50 (114)
299 3gmf_A Protein-disulfide isome 90.9 0.52 1.8E-05 31.1 5.3 50 20-71 6-57 (205)
300 2ec4_A FAS-associated factor 1 90.8 2.2 7.7E-05 27.5 8.7 83 29-130 54-141 (178)
301 3bci_A Disulfide bond protein 90.7 0.34 1.2E-05 31.1 4.2 40 31-71 12-53 (186)
302 2kok_A Arsenate reductase; bru 89.7 1.2 4E-05 26.7 5.8 61 35-104 7-71 (120)
303 3f4s_A Alpha-DSBA1, putative u 89.2 0.61 2.1E-05 31.3 4.6 42 29-71 38-81 (226)
304 1nm3_A Protein HI0572; hybrid, 88.8 0.65 2.2E-05 31.0 4.6 19 37-55 174-192 (241)
305 3l4n_A Monothiol glutaredoxin- 88.7 0.35 1.2E-05 29.6 2.9 53 31-87 14-68 (127)
306 2axo_A Hypothetical protein AT 88.1 2.7 9.2E-05 29.2 7.3 37 33-72 44-80 (270)
307 2jvx_A NF-kappa-B essential mo 88.0 0.035 1.2E-06 24.9 -1.5 20 43-62 6-25 (28)
308 3t58_A Sulfhydryl oxidase 1; o 86.5 0.46 1.6E-05 36.0 2.9 31 90-132 188-218 (519)
309 1u6t_A SH3 domain-binding glut 84.0 5.2 0.00018 24.2 7.9 49 36-85 3-52 (121)
310 2wul_A Glutaredoxin related pr 83.6 2.5 8.6E-05 25.4 4.8 56 26-88 15-75 (118)
311 4e6z_A Apicoplast TIC22, putat 82.7 8.7 0.0003 26.7 7.8 66 8-78 75-141 (279)
312 4f9z_D Endoplasmic reticulum r 82.0 3.2 0.00011 27.4 5.4 42 31-73 131-172 (227)
313 2in3_A Hypothetical protein; D 80.3 3.2 0.00011 26.9 4.8 37 34-71 9-45 (216)
314 3mjh_B Early endosome antigen 79.6 0.12 4.2E-06 24.1 -1.7 20 43-62 8-27 (34)
315 3ghf_A Septum site-determining 78.4 2.9 0.0001 25.2 3.8 55 27-88 44-98 (120)
316 2g2q_A Glutaredoxin-2; thiored 75.0 2.3 8E-05 25.6 2.6 30 31-61 2-31 (124)
317 3ga8_A HTH-type transcriptiona 72.9 3 0.0001 23.0 2.6 34 29-62 25-64 (78)
318 3kzq_A Putative uncharacterize 71.5 6.9 0.00024 25.3 4.6 37 34-71 4-40 (208)
319 2x8g_A Thioredoxin glutathione 67.1 10 0.00035 28.8 5.2 18 39-56 24-41 (598)
320 1xhj_A Nitrogen fixation prote 66.4 11 0.00038 21.4 4.1 32 20-54 28-59 (88)
321 4ev1_A Anabena TIC22; TIC22 fo 65.7 16 0.00055 25.0 5.5 68 8-79 12-92 (252)
322 2jad_A Yellow fluorescent prot 65.1 9.6 0.00033 27.6 4.5 24 31-56 261-285 (362)
323 2imf_A HCCA isomerase, 2-hydro 61.7 12 0.0004 24.1 4.2 34 35-71 3-36 (203)
324 4as2_A Phosphorylcholine phosp 61.6 10 0.00034 26.9 4.0 38 48-85 143-180 (327)
325 1l6r_A Hypothetical protein TA 60.6 29 0.001 22.6 6.1 39 54-92 28-66 (227)
326 3fvv_A Uncharacterized protein 60.6 23 0.00079 22.6 5.5 39 50-88 94-132 (232)
327 4gxt_A A conserved functionall 60.2 10 0.00035 27.4 4.0 40 48-87 221-260 (385)
328 2xry_A Deoxyribodipyrimidine p 58.4 46 0.0016 24.7 7.3 42 48-89 89-130 (482)
329 2qa2_A CABE, polyketide oxygen 56.2 12 0.00041 27.9 3.9 34 4-37 395-429 (499)
330 3umv_A Deoxyribodipyrimidine p 54.8 40 0.0014 25.4 6.5 42 47-89 91-132 (506)
331 2p9j_A Hypothetical protein AQ 53.0 26 0.0009 21.1 4.6 34 55-88 43-76 (162)
332 1r4w_A Glutathione S-transfera 52.9 21 0.0007 23.4 4.3 36 33-71 6-41 (226)
333 3j21_Z 50S ribosomal protein L 52.3 31 0.001 19.6 5.5 52 55-106 22-77 (99)
334 3fmw_A Oxygenase; mithramycin, 51.8 7 0.00024 29.8 2.0 34 4-37 445-480 (570)
335 1sji_A Calsequestrin 2, calseq 50.5 34 0.0012 23.9 5.3 36 38-73 252-288 (350)
336 1w41_A 50S ribosomal protein L 49.0 35 0.0012 19.4 5.5 52 55-106 23-78 (101)
337 3a1c_A Probable copper-exporti 48.9 37 0.0013 22.9 5.2 55 52-106 167-224 (287)
338 2wq7_A RE11660P; lyase-DNA com 48.3 62 0.0021 24.5 6.7 42 48-89 86-127 (543)
339 2qa1_A PGAE, polyketide oxygen 47.3 12 0.00042 27.8 2.7 34 4-37 394-428 (500)
340 2wm8_A MDP-1, magnesium-depend 46.8 30 0.001 21.6 4.2 40 50-89 70-110 (187)
341 3e58_A Putative beta-phosphogl 45.6 38 0.0013 20.8 4.6 38 51-88 92-129 (214)
342 3o9x_A Uncharacterized HTH-typ 44.8 41 0.0014 19.8 4.4 67 29-106 25-97 (133)
343 2obb_A Hypothetical protein; s 44.6 48 0.0017 20.3 4.7 42 53-94 29-73 (142)
344 3vhs_A ATPase wrnip1; zinc fin 43.9 0.75 2.6E-05 19.8 -2.6 11 42-52 8-18 (29)
345 1nnl_A L-3-phosphoserine phosp 43.6 23 0.00078 22.6 3.3 38 51-88 89-126 (225)
346 3gl5_A Putative DSBA oxidoredu 42.4 36 0.0012 22.6 4.2 39 33-71 3-42 (239)
347 2pib_A Phosphorylated carbohyd 42.0 43 0.0015 20.6 4.4 36 53-88 89-124 (216)
348 4a18_G RPL30; ribosome, eukary 41.9 49 0.0017 19.0 7.0 50 55-106 29-84 (104)
349 2j07_A Deoxyribodipyrimidine p 41.8 47 0.0016 24.2 5.0 43 47-89 48-90 (420)
350 2pr7_A Haloacid dehalogenase/e 41.2 22 0.00077 20.4 2.8 38 48-85 18-55 (137)
351 1k1e_A Deoxy-D-mannose-octulos 40.4 55 0.0019 20.2 4.7 33 56-88 43-75 (180)
352 2v2f_A Penicillin binding prot 40.1 10 0.00034 15.9 0.7 11 122-132 6-16 (26)
353 3m9l_A Hydrolase, haloacid deh 40.0 48 0.0017 20.6 4.4 35 53-87 75-109 (205)
354 3hug_B Probable conserved memb 39.5 13 0.00043 22.0 1.3 20 42-61 53-72 (108)
355 3s6j_A Hydrolase, haloacid deh 38.6 46 0.0016 20.9 4.2 36 53-88 96-131 (233)
356 2nyv_A Pgpase, PGP, phosphogly 38.2 53 0.0018 20.9 4.4 35 53-87 88-122 (222)
357 3v7q_A Probable ribosomal prot 37.6 57 0.002 18.6 6.6 49 57-106 28-80 (101)
358 3iz5_f 60S ribosomal protein L 37.2 63 0.0022 18.9 6.8 50 57-106 35-88 (112)
359 3us3_A Calsequestrin-1; calciu 37.2 34 0.0012 24.3 3.6 42 32-74 249-291 (367)
360 3o85_A Ribosomal protein L7AE; 37.1 66 0.0023 19.1 6.3 62 57-130 40-106 (122)
361 1owl_A Photolyase, deoxyribodi 36.8 55 0.0019 24.4 4.7 42 48-89 54-95 (484)
362 3ib6_A Uncharacterized protein 36.7 45 0.0015 20.8 3.8 38 51-88 37-77 (189)
363 1m5w_A Pyridoxal phosphate bio 36.7 52 0.0018 22.4 4.1 43 46-89 109-151 (243)
364 3fhk_A UPF0403 protein YPHP; d 36.0 78 0.0027 19.7 6.7 13 119-132 106-118 (147)
365 2q1z_B Anti-sigma factor CHRR, 36.0 19 0.00065 23.3 1.9 20 42-61 34-53 (195)
366 2hsz_A Novel predicted phospha 35.5 60 0.0021 21.0 4.4 35 53-87 119-153 (243)
367 3mmz_A Putative HAD family hyd 35.5 50 0.0017 20.4 3.9 33 56-88 47-79 (176)
368 2no4_A (S)-2-haloacid dehaloge 35.4 65 0.0022 20.5 4.6 38 51-88 108-145 (240)
369 2r0c_A REBC; flavin adenine di 35.2 32 0.0011 25.9 3.3 31 4-37 450-480 (549)
370 3um9_A Haloacid dehalogenase, 35.2 64 0.0022 20.2 4.5 36 53-88 101-136 (230)
371 1wr8_A Phosphoglycolate phosph 34.5 92 0.0031 20.0 5.8 37 53-89 25-61 (231)
372 1np7_A DNA photolyase; protein 34.4 63 0.0022 24.1 4.8 43 47-89 61-103 (489)
373 2gmw_A D,D-heptose 1,7-bisphos 34.4 66 0.0023 20.5 4.4 40 50-89 52-106 (211)
374 2z1d_A Hydrogenase expression/ 33.6 42 0.0014 24.3 3.5 47 12-61 31-84 (372)
375 3cpq_A 50S ribosomal protein L 33.2 72 0.0025 18.4 5.6 51 56-106 29-83 (110)
376 4g9p_A 4-hydroxy-3-methylbut-2 33.2 1.4E+02 0.0049 21.9 7.0 64 29-96 20-89 (406)
377 1zrn_A L-2-haloacid dehalogena 33.1 75 0.0026 20.0 4.6 35 53-87 100-134 (232)
378 3m1y_A Phosphoserine phosphata 33.1 29 0.00099 21.7 2.5 37 53-89 80-116 (217)
379 4ex6_A ALNB; modified rossman 33.1 56 0.0019 20.7 3.9 35 53-87 109-143 (237)
380 2j4d_A Cryptochrome 3, cryptoc 32.9 57 0.0019 24.6 4.3 42 48-89 97-138 (525)
381 1th5_A NIFU1; iron-sulfur clus 32.4 26 0.0009 19.1 1.8 35 20-57 26-60 (74)
382 3ibs_A Conserved hypothetical 32.4 96 0.0033 19.6 6.9 21 53-73 128-148 (218)
383 3kzx_A HAD-superfamily hydrola 32.0 43 0.0015 21.2 3.2 35 54-88 109-143 (231)
384 3skx_A Copper-exporting P-type 31.8 74 0.0025 20.7 4.5 38 51-88 147-184 (280)
385 2ale_A SNU13, NHP2/L7AE family 31.7 88 0.003 19.0 6.4 47 58-105 42-93 (134)
386 3gk0_A PNP synthase, pyridoxin 31.2 57 0.0019 22.6 3.7 43 46-89 137-179 (278)
387 1x92_A APC5045, phosphoheptose 30.8 56 0.0019 20.6 3.6 27 55-81 131-157 (199)
388 2aif_A Ribosomal protein L7A; 30.5 92 0.0032 18.8 6.7 61 58-130 51-116 (135)
389 3vi6_A 60S ribosomal protein L 30.3 90 0.0031 18.6 6.0 50 57-106 36-89 (125)
390 3umb_A Dehalogenase-like hydro 30.0 73 0.0025 20.0 4.1 35 54-88 105-139 (233)
391 1m3s_A Hypothetical protein YC 29.9 38 0.0013 21.1 2.6 29 53-81 95-123 (186)
392 3cnh_A Hydrolase family protei 29.7 96 0.0033 18.9 4.6 37 51-88 89-125 (200)
393 3kd3_A Phosphoserine phosphohy 29.6 51 0.0017 20.3 3.2 36 53-88 87-122 (219)
394 3mn1_A Probable YRBI family ph 29.5 67 0.0023 20.1 3.8 34 56-89 54-87 (189)
395 3fz5_A Possible 2-hydroxychrom 29.3 72 0.0025 20.3 3.9 33 35-70 7-39 (202)
396 2fpr_A Histidine biosynthesis 29.0 59 0.002 20.1 3.4 40 50-89 44-98 (176)
397 2r8e_A 3-deoxy-D-manno-octulos 29.0 62 0.0021 20.2 3.5 32 57-88 62-93 (188)
398 1veh_A NIFU-like protein hirip 28.7 25 0.00086 20.1 1.4 32 20-54 35-66 (92)
399 1g2o_A Purine nucleoside phosp 28.7 1.1E+02 0.0037 20.9 4.8 58 10-70 57-118 (268)
400 3sho_A Transcriptional regulat 28.5 38 0.0013 21.2 2.4 28 53-80 103-130 (187)
401 1u3d_A Cryptochrome 1 apoprote 28.1 98 0.0033 23.2 4.9 41 49-89 63-104 (509)
402 3rpp_A Glutathione S-transfera 28.0 88 0.003 20.6 4.3 36 33-71 6-41 (234)
403 1vim_A Hypothetical protein AF 27.9 38 0.0013 21.7 2.3 26 56-81 108-133 (200)
404 3n1u_A Hydrolase, HAD superfam 27.9 77 0.0026 19.9 3.8 33 57-89 55-87 (191)
405 2o2x_A Hypothetical protein; s 27.9 53 0.0018 21.0 3.1 40 50-89 58-112 (218)
406 2hoq_A Putative HAD-hydrolase 27.7 91 0.0031 19.8 4.3 36 53-88 99-134 (241)
407 3e8m_A Acylneuraminate cytidyl 27.7 75 0.0026 19.0 3.7 33 57-89 40-72 (164)
408 3p1v_A Metallo-endopeptidase; 27.6 27 0.00093 25.7 1.7 17 41-57 389-405 (407)
409 3j08_A COPA, copper-exporting 27.5 1E+02 0.0036 23.8 5.1 35 55-89 464-498 (645)
410 1qyi_A ZR25, hypothetical prot 27.2 1.3E+02 0.0046 21.6 5.3 40 49-88 216-255 (384)
411 3ktb_A Arsenical resistance op 27.2 99 0.0034 18.1 6.0 56 34-89 7-75 (106)
412 4eek_A Beta-phosphoglucomutase 27.2 80 0.0027 20.3 4.0 35 54-88 116-150 (259)
413 3fn2_A Putative sensor histidi 26.8 82 0.0028 18.4 3.3 14 119-132 48-61 (106)
414 3e20_C Eukaryotic peptide chai 26.7 37 0.0013 25.2 2.3 36 42-77 365-406 (441)
415 3kbb_A Phosphorylated carbohyd 26.7 1.1E+02 0.0037 19.0 4.4 36 53-88 89-124 (216)
416 2xhz_A KDSD, YRBH, arabinose 5 26.6 40 0.0014 20.9 2.3 13 61-73 120-132 (183)
417 4eze_A Haloacid dehalogenase-l 26.6 57 0.002 22.6 3.2 38 52-89 183-220 (317)
418 3fxa_A SIS domain protein; str 26.6 39 0.0013 21.5 2.2 31 51-81 106-136 (201)
419 3sd7_A Putative phosphatase; s 26.5 60 0.0021 20.6 3.2 34 55-88 117-150 (240)
420 3cwf_A Alkaline phosphatase sy 26.2 23 0.00077 20.6 0.9 12 122-133 50-61 (122)
421 1te2_A Putative phosphatase; s 26.0 1.2E+02 0.0041 18.6 4.6 32 57-88 103-134 (226)
422 3n07_A 3-deoxy-D-manno-octulos 26.0 86 0.0029 19.9 3.8 33 57-89 61-93 (195)
423 3twl_A Formamidopyrimidine-DNA 25.7 8.4 0.00029 27.2 -1.2 17 40-56 269-285 (310)
424 2a4x_A Mitomycin-binding prote 25.6 88 0.003 18.0 3.6 21 64-84 71-91 (138)
425 3rri_A Glyoxalase/bleomycin re 25.5 41 0.0014 19.3 2.1 13 120-132 110-122 (135)
426 3v67_A Sensor protein CPXA; PA 25.5 29 0.00099 21.3 1.4 14 120-133 55-68 (138)
427 1u07_A TONB protein; beta-hair 25.3 29 0.00099 19.1 1.2 14 119-132 26-39 (90)
428 2jya_A AGR_C_3324P, uncharacte 25.2 48 0.0016 19.5 2.2 29 65-93 51-79 (106)
429 2yj3_A Copper-transporting ATP 30.9 15 0.00052 24.7 0.0 40 49-88 137-176 (263)
430 4hoj_A REGF protein; GST, glut 25.0 77 0.0026 19.9 3.5 19 37-55 6-24 (210)
431 3v4k_A DNA DC->DU-editing enzy 25.0 47 0.0016 21.9 2.3 23 32-54 100-122 (203)
432 1x52_A Pelota homolog, CGI-17; 24.8 1.2E+02 0.004 18.1 4.3 31 46-76 69-99 (124)
433 3fy4_A 6-4 photolyase; DNA rep 24.6 74 0.0025 24.2 3.7 41 48-88 65-105 (537)
434 1vkf_A Glycerol uptake operon 24.6 1.5E+02 0.0051 19.3 5.1 62 53-128 45-114 (188)
435 1sk4_A Peptidoglycan recogniti 24.5 22 0.00074 22.3 0.7 13 120-132 62-74 (163)
436 3kts_A Glycerol uptake operon 24.5 1.5E+02 0.0051 19.3 5.5 63 53-128 43-113 (192)
437 2kpt_A Putative secreted prote 24.3 97 0.0033 19.0 3.7 28 46-73 25-53 (148)
438 2om6_A Probable phosphoserine 24.2 1.3E+02 0.0046 18.6 4.6 16 59-74 110-125 (235)
439 3j09_A COPA, copper-exporting 24.1 1.3E+02 0.0044 23.7 5.1 35 55-89 542-576 (723)
440 2hcf_A Hydrolase, haloacid deh 24.0 1E+02 0.0035 19.2 4.0 35 54-88 99-134 (234)
441 3gwi_A Magnesium-transporting 24.0 98 0.0033 19.4 3.7 25 48-72 112-136 (170)
442 1mhs_A Proton pump, plasma mem 24.0 1.3E+02 0.0046 24.5 5.2 32 57-88 544-575 (920)
443 2xzm_U Ribosomal protein L7AE 23.8 1.2E+02 0.0042 18.1 7.9 50 57-107 33-87 (126)
444 2l4c_A Endoplasmic reticulum r 23.8 48 0.0016 19.7 2.1 37 30-73 39-75 (124)
445 3ij5_A 3-deoxy-D-manno-octulos 23.7 96 0.0033 20.0 3.7 33 56-88 84-116 (211)
446 3u5e_c L32, RP73, YL38, 60S ri 23.6 1.1E+02 0.0038 17.4 6.7 49 56-106 30-84 (105)
447 3mc1_A Predicted phosphatase, 23.3 67 0.0023 20.0 2.9 35 54-88 92-126 (226)
448 3l8h_A Putative haloacid dehal 23.1 96 0.0033 18.8 3.6 39 51-89 30-83 (179)
449 1dnp_A DNA photolyase; DNA rep 23.1 67 0.0023 23.9 3.2 42 48-89 53-98 (471)
450 3o6c_A PNP synthase, pyridoxin 23.0 97 0.0033 21.3 3.6 40 49-89 109-148 (260)
451 3mxq_A Sensor protein; PSI2, M 23.0 29 0.00098 21.3 1.0 12 122-133 34-45 (152)
452 3sk2_A EHPR; antibiotic resist 22.9 59 0.002 18.6 2.4 12 121-132 114-125 (132)
453 2f2l_A Peptidoglycan-recogniti 22.9 24 0.00083 22.3 0.7 13 120-132 63-75 (167)
454 3etn_A Putative phosphosugar i 22.7 63 0.0021 21.0 2.7 31 51-81 120-152 (220)
455 3ia2_A Arylesterase; alpha-bet 22.7 1.6E+02 0.0053 18.8 6.0 50 15-71 3-53 (271)
456 3d6j_A Putative haloacid dehal 22.6 1.2E+02 0.0042 18.6 4.1 31 57-87 98-128 (225)
457 1yck_A Peptidoglycan recogniti 22.5 25 0.00085 22.4 0.7 13 120-132 72-84 (175)
458 2cb3_A Peptidoglycan-recogniti 22.4 25 0.00086 22.4 0.7 13 120-132 68-80 (175)
459 2xbl_A Phosphoheptose isomeras 22.3 41 0.0014 21.1 1.7 16 58-73 137-152 (198)
460 2fuk_A XC6422 protein; A/B hyd 22.3 1.4E+02 0.0049 18.2 5.9 20 53-72 58-77 (220)
461 3l7t_A SMU.1112C, putative unc 22.2 1.1E+02 0.0038 16.9 6.0 26 64-89 81-106 (134)
462 1vp8_A Hypothetical protein AF 22.1 97 0.0033 20.4 3.4 43 63-105 65-121 (201)
463 2xz8_A Peptidoglycan-recogniti 22.1 26 0.00089 21.9 0.7 13 120-132 70-82 (150)
464 2e0i_A 432AA long hypothetical 22.1 1.4E+02 0.0047 22.0 4.6 36 48-83 53-88 (440)
465 3up8_A Putative 2,5-diketo-D-g 21.9 2E+02 0.0068 19.7 5.3 31 57-87 143-174 (298)
466 3zxs_A Cryptochrome B, rscryb; 21.8 2.1E+02 0.0071 21.8 5.6 50 47-96 63-119 (522)
467 1tk9_A Phosphoheptose isomeras 21.5 37 0.0013 21.2 1.3 15 59-73 132-146 (188)
468 2i3d_A AGR_C_3351P, hypothetic 21.5 1.5E+02 0.0052 18.8 4.4 60 12-72 25-87 (249)
469 1lba_A T7 lysozyme; hydrolase( 21.3 37 0.0013 20.8 1.2 14 119-132 39-52 (146)
470 3jqo_B TRAO protein; helical o 21.3 49 0.0017 20.3 1.8 14 118-131 56-69 (135)
471 2f2l_X Peptidoglycan recogniti 21.3 27 0.00094 22.0 0.7 13 120-132 64-76 (167)
472 2rkq_A Peptidoglycan-recogniti 21.2 28 0.00095 22.0 0.7 13 120-132 65-77 (169)
473 1kjn_A MTH0777; hypotethical p 21.1 1.6E+02 0.0056 18.5 4.6 60 42-101 14-73 (157)
474 2xz4_A Peptidoglycan-recogniti 21.1 28 0.00095 22.3 0.7 13 120-132 71-83 (180)
475 1nrw_A Hypothetical protein, h 21.0 1.9E+02 0.0065 19.2 5.9 34 57-90 30-63 (288)
476 3ct8_A Protein BH2160, putativ 20.9 1.4E+02 0.0047 17.5 3.9 13 120-132 128-140 (146)
477 3vk8_A Probable formamidopyrim 20.8 15 0.00052 25.6 -0.7 7 42-48 281-287 (295)
478 3n28_A Phosphoserine phosphata 20.7 87 0.003 21.6 3.2 37 53-89 183-219 (335)
479 4fe3_A Cytosolic 5'-nucleotida 20.7 77 0.0026 21.4 2.9 35 54-88 147-181 (297)
480 1sxr_A Peptidoglycan recogniti 20.6 29 0.00098 22.4 0.6 13 120-132 74-86 (183)
481 2hi0_A Putative phosphoglycola 20.5 94 0.0032 19.9 3.2 34 54-87 116-149 (240)
482 2p4s_A Purine nucleoside phosp 20.4 2E+02 0.0068 20.8 5.0 28 9-37 137-167 (373)
483 3ir9_A Peptide chain release f 20.4 34 0.0012 21.7 1.0 24 53-76 122-145 (166)
484 1mzu_A PPR; photoactive yellow 20.4 36 0.0012 20.7 1.0 12 122-133 34-45 (129)
485 3vow_A Probable DNA DC->DU-edi 20.3 43 0.0015 21.9 1.4 23 32-54 86-108 (190)
486 3nvb_A Uncharacterized protein 20.2 1.8E+02 0.006 21.2 4.8 37 48-84 256-292 (387)
487 3ep1_A PGRP-HD - peptidoglycan 20.1 30 0.001 22.3 0.7 13 120-132 78-90 (176)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=8.6e-37 Score=199.05 Aligned_cols=129 Identities=23% Similarity=0.386 Sum_probs=110.9
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.|++|+++|+|++++.+| +++|+++ +||+++|+||+++|||.|+.+++.|+++++++++.++++++||.|+++.+++|
T Consensus 3 ~l~vG~~aPdF~l~~~~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~ 81 (157)
T 4g2e_A 3 MVEIGELAPDFELPDTELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAF 81 (157)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCcCeEeECCCCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHH
Confidence 379999999999999999 8999999 88999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++.++|+++|++++++++||+..... ...+.....|++||||++|+|+
T Consensus 82 ~~~~~~~~p~l~D~~~~v~~~ygv~~~~~-~~~~~~~~~p~tflID~~G~I~ 132 (157)
T 4g2e_A 82 KEHNKLNFTILSDYNREVVKKYNVAWEFP-ALPGYVLAKRAVFVIDKEGKVR 132 (157)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCEEECT-TSTTCEEECEEEEEECTTSBEE
T ss_pred HHHcCCcEEEEEcCCcHHHHHcCCccccc-cCCCcceeeeeEEEECCCCEEE
Confidence 99999999999999999999999964321 2233335789999999999984
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=1.3e-37 Score=204.44 Aligned_cols=129 Identities=24% Similarity=0.406 Sum_probs=116.4
Q ss_pred CCCCCCCCCceEEecCCC-eeeccccc-CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFI-GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~-~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~ 80 (133)
.|++|+++|+|++++.+| +++|+|+. +||++||+||+++|||.|+.+++.|+++++++++.|+++++||.|+++.+++
T Consensus 4 ml~vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~ 83 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKK 83 (164)
T ss_dssp CCCTTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHH
T ss_pred cccCCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHH
Confidence 379999999999999999 89999985 6789999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 81 WIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|+++++.++|+++|+++++++.||++.++.....+ .+.|++||||++|+|+
T Consensus 84 ~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~--~~~p~tflID~~G~I~ 134 (164)
T 4gqc_A 84 FKDENRLAFNLLSDYNREVIKLYNVYHEDLKGLKM--VAKRAVFIVKPDGTVA 134 (164)
T ss_dssp HHHHTTCCSEEEECTTSHHHHHTTCEEEEETTEEE--EECCEEEEECTTSBEE
T ss_pred HHHhcCcccceeecCchHHHHHcCCcccccccCcC--CeeeEEEEECCCCEEE
Confidence 99999999999999999999999997543222122 4689999999999984
No 3
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=100.00 E-value=9.8e-34 Score=184.82 Aligned_cols=132 Identities=25% Similarity=0.408 Sum_probs=116.0
Q ss_pred CCCCCCCCCCCceE--EecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHH
Q 044272 1 MPGLTIGDSVPNLQ--VQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKS 77 (133)
Q Consensus 1 m~~l~~G~~~p~f~--l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~ 77 (133)
|+.+.+|+++|+|+ +++.+| +++++++ +|++++|+||+++||+.|+.+++.|++++++++++|+++|+||.|+++.
T Consensus 4 m~~l~~G~~~P~f~~~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~ 82 (163)
T 3gkn_A 4 MTDAVLELPAATFDLPLSLSGGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKS 82 (163)
T ss_dssp CCCCCCCCCGGGGGCCEECSTTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred ccccccCCcCCCccccccCCCCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 66789999999999 999999 8999999 7889999999779999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++|+++++.+++++.|.+.++++.||+...+...+.....+.|++||||++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~ 138 (163)
T 3gkn_A 83 HDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVV 138 (163)
T ss_dssp HHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEE
T ss_pred HHHHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEE
Confidence 99999999999999999999999999996432111111011389999999999984
No 4
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=100.00 E-value=6.1e-34 Score=189.07 Aligned_cols=130 Identities=23% Similarity=0.427 Sum_probs=114.9
Q ss_pred CCCCCCC----CCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHH
Q 044272 3 GLTIGDS----VPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKS 77 (133)
Q Consensus 3 ~l~~G~~----~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~ 77 (133)
.|++|+. +|+|++++.+| +++|+++ +|+++||+||+++||+.|+.+++.|++++++++++|++|++||.|+++.
T Consensus 20 ~l~~Gd~ig~~aP~f~l~~~~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~ 98 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLMLSGSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKS 98 (179)
T ss_dssp SSCTTCBCCHHHHHCCEEEGGGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHH
T ss_pred ccCcCcccCCcCCCeeEECCCCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 4788999 99999999999 8999999 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++|+++++.+++++.|++.++++.||+.......+.....+.|++||||++|+|+
T Consensus 99 ~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~ 154 (179)
T 3ixr_A 99 HDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIV 154 (179)
T ss_dssp HHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEE
T ss_pred HHHHHHHcCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEE
Confidence 99999999999999999999999999997533211111112589999999999985
No 5
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=191.42 Aligned_cols=123 Identities=19% Similarity=0.323 Sum_probs=111.4
Q ss_pred CCCCCCCCceEEe---cCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHH
Q 044272 4 LTIGDSVPNLQVQ---TNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHN 79 (133)
Q Consensus 4 l~~G~~~p~f~l~---~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~ 79 (133)
+++|+++|||+++ |.+| +++|+|| +||++||+||++.|||.|+.+++.+++.+++|+++|++|++||.|+.....
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~ 101 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLL 101 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHH
T ss_pred hhcCCcCCCCCCcceECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHH
Confidence 7899999999987 4455 7999999 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 80 EWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 80 ~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+|++.. +.++|+++|+++++++.||++.++ .| ...|++||||++|+||
T Consensus 102 aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~----~g--~~~R~tFiID~~G~Ir 156 (216)
T 3sbc_A 102 AWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEE----EG--VALRGLFIIDPKGVIR 156 (216)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeecc----CC--ceeeEEEEECCCCeEE
Confidence 999765 356799999999999999997543 23 5789999999999985
No 6
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=100.00 E-value=1.8e-33 Score=186.09 Aligned_cols=130 Identities=25% Similarity=0.439 Sum_probs=114.2
Q ss_pred CCCCCCCCCceEEe-cCCC-eeecccccCCCeEEEEEeeCCCCchhH-HHHHHHHhhhhHHHHcCceEEE-EeCCCHHHH
Q 044272 3 GLTIGDSVPNLQVQ-TNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEFDKREVKLLG-LSCDDVKSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~-~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~-~~~~~l~~~~~~~~~~~v~vv~-is~d~~~~~ 78 (133)
.+.+|+++|+|+++ +.+| +++|+++.+|+++||+|||++|||.|+ .+++.|++++++|+++|+++|+ ||.|+++.+
T Consensus 14 ~~~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~ 93 (173)
T 3mng_A 14 PIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVT 93 (173)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHH
T ss_pred CCCCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHH
Confidence 47899999999999 8999 899999448889999999999999999 5999999999999999999997 999999999
Q ss_pred HHHHHhcCCC--CceeeCCcHHHHHHcCCCCCCCC-CCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDIEAY--TPIIADPNREIIKQLNMVDPDEK-DSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++|+++++.+ +++++|++++++++||+...+.. +..|.....|++|||| +|+|+
T Consensus 94 ~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~ 150 (173)
T 3mng_A 94 GEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVK 150 (173)
T ss_dssp HHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEE
T ss_pred HHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEE
Confidence 9999999998 89999999999999999754321 0012224789999999 99985
No 7
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=100.00 E-value=6.5e-33 Score=182.47 Aligned_cols=130 Identities=21% Similarity=0.345 Sum_probs=113.3
Q ss_pred CCCCCCCCCCCceEEe-cCCC-eeecccccCCCeEEEEEeeCCCCchhHH-HHHHHHhhhhHHHHcCc-eEEEEeCCCHH
Q 044272 1 MPGLTIGDSVPNLQVQ-TNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTT-ELGKMAAYVPEFDKREV-KLLGLSCDDVK 76 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~-~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~-~~~~l~~~~~~~~~~~v-~vv~is~d~~~ 76 (133)
|+ +.+|+++|+|+++ +.+| +++|+++.+|+++||+|||++|||.|+. +++.|++++++++++|+ +|++||.|+++
T Consensus 1 m~-l~~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~ 79 (167)
T 2wfc_A 1 MP-IKEGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSF 79 (167)
T ss_dssp -C-CCTTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHH
T ss_pred CC-CCCCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHH
Confidence 54 8899999999999 9999 8999998567899999999999999999 99999999999999999 99999999999
Q ss_pred HHHHHHHhcCCC--CceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 77 SHNEWIKDIEAY--TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 77 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+++|+++++.+ +++++|+++++++.||+..... ...|.....|++||| ++|+|+
T Consensus 80 ~~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~-~~~g~~~~~p~t~lI-~~G~I~ 136 (167)
T 2wfc_A 80 VMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDLS-AVLGNVRSKRYSLVI-EDGVVT 136 (167)
T ss_dssp HHHHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCH-HHHSSCEECCEEEEE-ETTEEE
T ss_pred HHHHHHHhcCCCcceEEEECCCCcHHHHcCCccccc-cccCcccceEEEEEE-eCCEEE
Confidence 999999999998 8999999999999999964210 001212356999999 999985
No 8
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=100.00 E-value=2.4e-32 Score=178.25 Aligned_cols=121 Identities=21% Similarity=0.400 Sum_probs=112.6
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCCe-EEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDNW-TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~-~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
+.+|+++|+|++++.+| +++++++ +|++ ++|+||+++||+.|+.+++.|.+++++++++|+++|+||.|+++.+++|
T Consensus 2 l~~G~~~P~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~ 80 (161)
T 3drn_A 2 VKVGDKAPLFEGIADNGEKISLSDY-IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRF 80 (161)
T ss_dssp CCTTSBCCCCEEEETTSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCCCCcCCCeEeecCCCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 68999999999999999 8999999 7787 8888888999999999999999999999998999999999999999999
Q ss_pred HHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++.+++++.|.+..+.+.||+. +...+.|++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~v~--------~~~~~~P~~~lid~~G~i~ 124 (161)
T 3drn_A 81 KEKYKLPFILVSDPDKKIRELYGAK--------GFILPARITFVIDKKGIIR 124 (161)
T ss_dssp HHHTTCCSEEEECTTSHHHHHTTCC--------CSSSCCCEEEEECTTSBEE
T ss_pred HHHhCCCceEEECCcHHHHHHcCCC--------CcCcccceEEEECCCCEEE
Confidence 9999999999999999999999995 2235799999999999984
No 9
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=9.9e-33 Score=187.64 Aligned_cols=123 Identities=24% Similarity=0.483 Sum_probs=111.4
Q ss_pred CCCCCCCCceEE----ecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 4 LTIGDSVPNLQV----QTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 4 l~~G~~~p~f~l----~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
+++|+++|+|++ +|.+| +++|+|| +||++||+||++.|||.|+.++..+++.+++|+++|++|++||.|+.+..
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh 104 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAH 104 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCcCCCCcccccccCCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhH
Confidence 589999999994 46677 7999999 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+|+++. +.++|+++|++++++++||++.++ .| ...+++||||++|+|+
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~----~g--~~~R~tFiIDp~g~Ir 160 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEES----QG--VAYRGLFIIDPHGMLR 160 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHhhhhHHhcCccccccccccCcccHHHHHcCCcccC----CC--eeEEEEEEECCCCeEE
Confidence 9999875 456799999999999999997543 23 5789999999999985
No 10
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=100.00 E-value=2.9e-32 Score=186.93 Aligned_cols=131 Identities=50% Similarity=0.926 Sum_probs=114.2
Q ss_pred CCCCCCCCCceEEecCCCeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWI 82 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~ 82 (133)
.+.+|+++|+|++.+.+|+++|+++.+++++||+||+++|||+|+.+++.|++++++|+++|++||+||.|+.+.+.+|+
T Consensus 4 ~l~~G~~aP~F~l~~~~G~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~ 83 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWS 83 (224)
T ss_dssp -CCTTCBCCCCEEEETTEEEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH
T ss_pred cCCCcCCCCCcEEecCCCCEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 37899999999999999999999994434899999999999999999999999999999999999999999999999998
Q ss_pred Hh----------cCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 83 KD----------IEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 83 ~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+. .+.++|++.|.+.++++.||+..++.....|.....|++||||++|+|+
T Consensus 84 ~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~ 144 (224)
T 1prx_A 84 KDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLK 144 (224)
T ss_dssp HHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEE
T ss_pred HHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEE
Confidence 87 6778899999999999999997543322223335799999999999985
No 11
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=100.00 E-value=8.4e-33 Score=190.49 Aligned_cols=131 Identities=47% Similarity=0.899 Sum_probs=113.6
Q ss_pred CCCCCCCCCCCceEEecCCCeeecccccCCC-eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHH
Q 044272 1 MPGLTIGDSVPNLQVQTNQGNFKLHDFIGDN-WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHN 79 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~~G~~~l~d~~~~~-~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~ 79 (133)
|+ +.+|+++|+|++++.+|+++|+++ .|+ ++||+||+++|||+|+.+++.|++++++|+++|++||+||.|+.+.+.
T Consensus 1 M~-l~iG~~aPdF~l~~~~G~v~l~d~-~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~ 78 (233)
T 2v2g_A 1 MG-ITLGEVFPNFEADSTIGKLKFHDW-LGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHK 78 (233)
T ss_dssp -C-CCTTCBCCCCEEEETTCCEEHHHH-HCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CC-CCCCCCCCCcEEecCCCCEEHHHH-CCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHH
Confidence 55 789999999999999999999999 555 999999999999999999999999999999999999999999999999
Q ss_pred HHHH------hc--CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 80 EWIK------DI--EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 80 ~~~~------~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+|++ +. +.++|+++|.++++++.||+..++.....|.....|++||||++|+|+
T Consensus 79 ~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~ 140 (233)
T 2v2g_A 79 EWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLK 140 (233)
T ss_dssp HHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEE
T ss_pred HHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEE
Confidence 9998 56 778899999999999999996432111122224789999999999985
No 12
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=100.00 E-value=2e-32 Score=179.07 Aligned_cols=129 Identities=22% Similarity=0.400 Sum_probs=112.9
Q ss_pred CCCCCCCCCCCceEEe--cCCC---eeeccc-ccCCCeEEEEEeeCCCCchhH-HHHHHHHhhhhHHHHcCce-EEEEeC
Q 044272 1 MPGLTIGDSVPNLQVQ--TNQG---NFKLHD-FIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEFDKREVK-LLGLSC 72 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~--~~~G---~~~l~d-~~~~~~~vl~f~~~~~c~~C~-~~~~~l~~~~~~~~~~~v~-vv~is~ 72 (133)
|+.+.+|+++|+|+++ +.+| +++|++ + +||++||+||+++|||.|+ .+++.|++++++++++|++ |++||.
T Consensus 1 mm~~~~G~~aP~f~l~~~~~~G~~~~~~l~~~~-~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~ 79 (162)
T 1tp9_A 1 MAPIAVGDVLPDGKLAYFDEQDQLQEVSVHSLV-AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISV 79 (162)
T ss_dssp CCCCCTTCBCCCCEEEEECTTSCEEEEESHHHH-TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCcCCCCCCCCCeEEEeecCCCCceeEeHHHHh-CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 5668999999999986 7888 499999 7 8899999999999999999 9999999999999999999 999999
Q ss_pred CCHHHHHHHHHhcCC--CCceeeCCcHHHHHHcCCCCCCCCCCCCC-CccceeEEEECCCCccC
Q 044272 73 DDVKSHNEWIKDIEA--YTPIIADPNREIIKQLNMVDPDEKDSSGK-QLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 73 d~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~lid~~G~i~ 133 (133)
|+++.+++|+++++. ++++++|+++++++.||+...... .|. ..+.|++|||| +|+|+
T Consensus 80 d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~--~g~~~~~~p~~~vid-~G~i~ 140 (162)
T 1tp9_A 80 NDPFVMKAWAKSYPENKHVKFLADGSATYTHALGLELDLQE--KGLGTRSRRFALLVD-DLKVK 140 (162)
T ss_dssp SCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTTCEEEETT--TTSEEEECCEEEEEE-TTEEE
T ss_pred CCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcCccccccc--CCCCccceeEEEEEE-CCEEE
Confidence 999999999999999 789999999999999999632211 120 02589999999 99985
No 13
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.1e-33 Score=184.34 Aligned_cols=130 Identities=22% Similarity=0.354 Sum_probs=113.2
Q ss_pred CCCCCCCCCCCceEEecC--CC--eeeccc-ccCCCeEEEEEeeCCCCchhHH-HHHHHHhhhhHHHHcCce-EEEEeCC
Q 044272 1 MPGLTIGDSVPNLQVQTN--QG--NFKLHD-FIGDNWTIIFSHPGDFTPVCTT-ELGKMAAYVPEFDKREVK-LLGLSCD 73 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~--~G--~~~l~d-~~~~~~~vl~f~~~~~c~~C~~-~~~~l~~~~~~~~~~~v~-vv~is~d 73 (133)
|+.+++|+++|+|++++. +| +++|++ + +|+++||+|||++|||.|+. +++.|++++++|+++|++ |++||.|
T Consensus 23 ~~~l~vG~~aPdf~l~~~~~~G~~~v~L~d~~-~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 101 (184)
T 3uma_A 23 MMTIAVGDKLPNATFKEKTADGPVEVTTELLF-KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN 101 (184)
T ss_dssp SSCCCTTCBCCCCEEEEEETTEEEEEEHHHHH-TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred cCcCCCCCCCCCcEeecccCCCceEEeHHHHh-CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 445899999999999998 88 599999 6 88999999999999999999 899999999999999999 9999999
Q ss_pred CHHHHHHHHHhcCCC--CceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 DVKSHNEWIKDIEAY--TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++.+++|+++++.+ +|+++|++++++++||+.......+.| ....|++|||| +|+|+
T Consensus 102 ~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g-~~~~r~tfiId-dG~I~ 161 (184)
T 3uma_A 102 DLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLG-IRSKRYSMLVE-DGVVK 161 (184)
T ss_dssp CHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCE-EEECCEEEEEE-TTEEE
T ss_pred CHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCc-ccceeEEEEEC-CCEEE
Confidence 999999999999999 899999999999999996432111111 02568999996 99985
No 14
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.98 E-value=2.2e-32 Score=187.03 Aligned_cols=131 Identities=38% Similarity=0.790 Sum_probs=112.7
Q ss_pred CCCCCCCCCCCceEEecC--CCeeecccccCCC-eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHH
Q 044272 1 MPGLTIGDSVPNLQVQTN--QGNFKLHDFIGDN-WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKS 77 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~--~G~~~l~d~~~~~-~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~ 77 (133)
|+ +.+|+++|+|++++. +|+++|+++ +|+ ++||+||+++|||.|+.+++.|++++++|+++|++||+||.|+.+.
T Consensus 1 m~-l~iG~~aP~F~l~~~~~~G~v~l~d~-~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~ 78 (220)
T 1xcc_A 1 MG-YHLGATFPNFTAKASGIDGDFELYKY-IENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKES 78 (220)
T ss_dssp -C-CCTTCBCCCCEECBTTCSSCEEHHHH-TTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred CC-CCCCCCCCCcEeecccCCCcEeHHHH-cCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHH
Confidence 54 789999999999999 889999999 666 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-------hcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIK-------DIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+|.+ +.+.++|+++|.++++++.||+..++.....|.....|++||||++|+|+
T Consensus 79 ~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~ 141 (220)
T 1xcc_A 79 HDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIK 141 (220)
T ss_dssp HHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEE
T ss_pred HHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEE
Confidence 999987 46777899999999999999996432211122224689999999999985
No 15
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.98 E-value=8e-32 Score=176.64 Aligned_cols=121 Identities=21% Similarity=0.282 Sum_probs=110.6
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+++|+|++++.+| +++|+++ +|++++|+||+++||+.|+.+++.|++++++ .++++++||.|+++.+++|
T Consensus 19 ~l~~G~~aP~f~l~~~~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~~~~~~~~ 94 (166)
T 3p7x_A 19 QINEGDFAPDFTVLDNDLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADLPFAQKRW 94 (166)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSCHHHHHHH
T ss_pred cCCCCCCCCCeEEEcCCCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCCHHHHHHH
Confidence 478999999999999999 8999999 8899999999999999999999999999888 6899999999999999999
Q ss_pred HHhcCC-CCceeeCC-cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIADP-NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++. ++++++|. +..+++.||+...+ .| .+.|++||||++|+|+
T Consensus 95 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~----~g--~~~p~~~liD~~G~i~ 142 (166)
T 3p7x_A 95 CASAGLDNVITLSDHRDLSFGENYGVVMEE----LR--LLARAVFVLDADNKVV 142 (166)
T ss_dssp HHHHTCSSCEEEECTTTCHHHHHHTCEETT----TT--EECCEEEEECTTCBEE
T ss_pred HHHcCCCceEEccCCchhHHHHHhCCcccc----CC--ceeeEEEEECCCCeEE
Confidence 999999 78999999 88999999996432 22 3689999999999985
No 16
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.98 E-value=1.4e-31 Score=175.05 Aligned_cols=122 Identities=16% Similarity=0.272 Sum_probs=110.7
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+++|+|++++.+| +++++++ +||+++|+||+++||+.|+.+++.|+++++++ .++++++||.|+++.+++|
T Consensus 15 ~~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~~~ 91 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQKRW 91 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCCEEEEcCCCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHHHH
Confidence 368999999999999999 8999999 88999999998899999999999999999999 6899999999999999999
Q ss_pred HHhcCC-CCceeeC-CcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIAD-PNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++. +++++.| .++.+++.||+...+ .| .+.|++||||++|+|+
T Consensus 92 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~----~g--~~~p~~~liD~~G~i~ 139 (163)
T 1psq_A 92 CGAEGLDNAIMLSDYFDHSFGRDYALLINE----WH--LLARAVFVLDTDNTIR 139 (163)
T ss_dssp HHHHTCTTSEEEECTTTCHHHHHHTCBCTT----TC--SBCCEEEEECTTCBEE
T ss_pred HHhcCCCCcEEecCCchhHHHHHhCCcccc----CC--ceEEEEEEEcCCCeEE
Confidence 999999 8999999 889999999996432 12 3579999999999985
No 17
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.98 E-value=1.1e-31 Score=183.65 Aligned_cols=126 Identities=28% Similarity=0.457 Sum_probs=110.4
Q ss_pred CCCCCCCCCCCceEEecC--CC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCH
Q 044272 1 MPGLTIGDSVPNLQVQTN--QG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDV 75 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~--~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~ 75 (133)
|+.+.+|+++|+|++++. +| +++|+++.+||++||+||+++|||.|+.+++.|++++++|++++++||+||.|++
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~ 101 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSV 101 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 566889999999999998 88 5999998567899999998999999999999999999999989999999999999
Q ss_pred HHHHHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 76 KSHNEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 76 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+++|++++ +.+++++.|.+.++++.||+. .+ .| ...|++||||++|+|+
T Consensus 102 ~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~----~g--~~~P~~~lID~~G~I~ 159 (221)
T 2c0d_A 102 YSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YD----NS--FALRGLFIIDKNGCVR 159 (221)
T ss_dssp HHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ET----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-cc----CC--CccceEEEECCCCeEE
Confidence 9999999998 667899999999999999996 32 12 3689999999999985
No 18
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.97 E-value=5.7e-32 Score=177.28 Aligned_cols=125 Identities=20% Similarity=0.240 Sum_probs=111.2
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+++|+|++++.+| +++|+++ +||++||+||+++||+.|+.+++.|+++++++ .+++|++||.|+++.+++|
T Consensus 16 ~~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 92 (165)
T 1q98_A 16 FPQVGEIVENFILVGNDLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQARF 92 (165)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHTTC
T ss_pred cCCCCCCCCCeEEECCCCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHHHH
Confidence 478999999999999999 8999999 88999999998999999999999999999998 6899999999999999999
Q ss_pred HHhcCC-CCceeeCC-cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIADP-NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++. ++++++|. +..+++.||+...+. ...| .+.|++||||++|+|+
T Consensus 93 ~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~-~~~g--~~~p~~~liD~~G~i~ 143 (165)
T 1q98_A 93 CGAEGIENAKTVSTFRNHALHSQLGVDIQTG-PLAG--LTSRAVIVLDEQNNVL 143 (165)
T ss_dssp TTTTTCTTEEEEECTTCTHHHHHTTCEECSS-TTTT--SBCCEEEEECTTSBEE
T ss_pred HHHcCCCceEEeeccccchHHHHhCceeccc-ccCC--ccceeEEEEcCCCEEE
Confidence 999999 68999998 799999999964321 1123 3689999999999985
No 19
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.97 E-value=8.4e-32 Score=181.74 Aligned_cols=125 Identities=15% Similarity=0.212 Sum_probs=112.7
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+++|+|++++.+| +++|+++ +||+++|+||+++||+.|+.+++.|+++++++ +|++|++||.|+++.+++|
T Consensus 51 ~l~~G~~aPdf~l~d~~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~~~~~~~~ 127 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKDLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDLPFAQSRF 127 (200)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSCHHHHTTC
T ss_pred cCCCCCCCCCeEEECCCCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCCHHHHHHH
Confidence 478999999999999999 8999999 88999999999999999999999999999999 6899999999999999999
Q ss_pred HHhcCC-CCceeeCC-cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIADP-NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++. ++++++|. ++.+++.||+..... ...| .+.|++||||++|+|+
T Consensus 128 ~~~~~~~~f~~l~D~~~~~~~~~ygv~~~~~-~~~g--~~~p~~~lID~~G~I~ 178 (200)
T 3zrd_A 128 CGAEGLSNVITLSTLRGADFKQAYGVAITEG-PLAG--LTARAVVVLDGQDNVI 178 (200)
T ss_dssp TTTTTCTTEEEEETTSCTHHHHHTTCEECSS-TTTT--SBCCEEEEECTTSBEE
T ss_pred HHHcCCCCceEEecCchHHHHHHhCceeecc-cCCC--ccccEEEEECCCCeEE
Confidence 999999 88999999 899999999974321 1123 3789999999999985
No 20
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.97 E-value=2.7e-31 Score=183.76 Aligned_cols=124 Identities=25% Similarity=0.387 Sum_probs=111.0
Q ss_pred CCCCCCCCCceEEecC---CC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 3 GLTIGDSVPNLQVQTN---QG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~---~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
.+.+|+++|+|++++. +| +++|+++ +|+++||+||+++|||.|+.+++.|++++++|+++|++||+||.|+.+..
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~ 125 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTH 125 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4789999999998854 45 7999999 88999999998899999999999999999999999999999999999999
Q ss_pred HHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+|++++ +.++|+++|.++++++.||+.... .| ...|++||||++|+|+
T Consensus 126 ~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~----~g--~~~p~~flID~~G~I~ 181 (240)
T 3qpm_A 126 LAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLED----QG--HTLRGLFIIDEKGVLR 181 (240)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCcccc----CC--CccceEEEEcCCCeEE
Confidence 9999987 678899999999999999996432 12 4689999999999985
No 21
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.97 E-value=2.7e-31 Score=185.10 Aligned_cols=125 Identities=25% Similarity=0.388 Sum_probs=111.9
Q ss_pred CCCCCCCCCCceEEecC---CC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHH
Q 044272 2 PGLTIGDSVPNLQVQTN---QG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKS 77 (133)
Q Consensus 2 ~~l~~G~~~p~f~l~~~---~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~ 77 (133)
..+.+|+++|+|++++. +| +++|+++ +||++||+||+++||++|+.+++.|++++++|+++|++||+||.|+.+.
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~ 138 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFT 138 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred cccCCCCCCCCcEeeeecCCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 35789999999998754 56 7999999 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
..+|++++ +.++|++.|.+..+++.||+...+ .| ...|++||||++|+|+
T Consensus 139 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~----~g--~~~p~tflID~~G~I~ 195 (254)
T 3tjj_A 139 HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED----SG--HTLRGLFIIDDKGILR 195 (254)
T ss_dssp HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCcccc----CC--CccceEEEECCCCeEE
Confidence 99999887 677899999999999999996432 12 4689999999999985
No 22
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.97 E-value=6.3e-31 Score=173.06 Aligned_cols=124 Identities=21% Similarity=0.304 Sum_probs=110.4
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+++|+|++++.+| +++++++ +|++++|+||+++|||.|+.+++.|+++++++ +++++++||.|+++.+++|
T Consensus 20 ~l~~g~~~P~f~l~~~~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~~~~~~~~ 96 (171)
T 2yzh_A 20 ELKVGDRAPEAVVVTKDLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDLPFAQKRF 96 (171)
T ss_dssp CCCTTSBCCCEEEEETTSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHHHH
T ss_pred cCCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCCHHHHHHH
Confidence 368999999999999999 8999999 78999999998999999999999999999999 6899999999999999999
Q ss_pred HHhcCC-CCceeeC-CcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIAD-PNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++. +++++.| ++.++ +.||+...+. ...| .+.|++||||++|+|+
T Consensus 97 ~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~-~~~g--~~~p~~~liD~~G~i~ 146 (171)
T 2yzh_A 97 CESFNIQNVTVASDFRYRDM-EKYGVLIGEG-ALKG--ILARAVFIIDKEGKVA 146 (171)
T ss_dssp HHHTTCCSSEEEECTTTCGG-GGGTCBBCSS-TTTT--SBCCEEEEECTTSBEE
T ss_pred HHHcCCCCeEEeecCccCcH-HHhCCEeccc-ccCC--ceeeEEEEEcCCCeEE
Confidence 999999 8899999 78889 9999975321 1123 4689999999999984
No 23
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.97 E-value=4.2e-31 Score=176.37 Aligned_cols=122 Identities=28% Similarity=0.476 Sum_probs=110.2
Q ss_pred CCCCCCCceEEecC-CC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHH
Q 044272 5 TIGDSVPNLQVQTN-QG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNE 80 (133)
Q Consensus 5 ~~G~~~p~f~l~~~-~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~ 80 (133)
.+|+++|+|++++. +| +++|+++ +||++||+||+++|||.|+.+++.|++++++++++|++|++||.|+++.+++
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~ 80 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKA 80 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHH
T ss_pred CCCCcCCCcEeecccCCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 57999999999998 57 5999999 7899999998889999999999999999999999999999999999999999
Q ss_pred HHHhc----CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 81 WIKDI----EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 81 ~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|++++ +.++++++|.++++++.||+...+ .| .+.|++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~----~g--~~~p~~~lID~~G~i~ 131 (186)
T 1n8j_A 81 WHSSSETIAKIKYAMIGDPTGALTRNFDNMRED----EG--LADRATFVVDPQGIIQ 131 (186)
T ss_dssp HHHHCTTGGGCCSEEEECTTSHHHHHTTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHcCcccCCceeEEECCchHHHHHhCCccCC----CC--ceeeEEEEECCCCeEE
Confidence 99999 788899999999999999996432 12 3689999999999985
No 24
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=180.06 Aligned_cols=124 Identities=24% Similarity=0.353 Sum_probs=110.4
Q ss_pred CCCCCCCCCceEEecC---CC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 3 GLTIGDSVPNLQVQTN---QG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~---~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
.+.+|+++|+|++++. +| +++|+++ +|+++||+||+++||+.|+.+++.|++++++|++++++||+||.|+++.+
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 96 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTH 96 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4689999999999974 46 7999999 88999999998999999999999999999999988999999999999999
Q ss_pred HHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++|++++ +.+++++.|.++++++.||+...+ .| ...|++||||++|+|+
T Consensus 97 ~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~----~g--~~~p~~~lID~~G~I~ 152 (211)
T 2pn8_A 97 LAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLED----SG--HTLRGLFIIDDKGILR 152 (211)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccC----CC--cccceEEEECCCCEEE
Confidence 9999988 677899999999999999996432 12 3699999999999985
No 25
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.97 E-value=1.5e-30 Score=174.62 Aligned_cols=125 Identities=30% Similarity=0.595 Sum_probs=112.9
Q ss_pred CCCCCCCCCCCceEEecCC-------------C---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcC
Q 044272 1 MPGLTIGDSVPNLQVQTNQ-------------G---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKRE 64 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~~-------------G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~ 64 (133)
|+.+.+|+++|+|++++.+ | +++++++ +|++++|+||+++||+.|+.+++.|.++++++++++
T Consensus 1 m~~l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~ 79 (195)
T 2bmx_A 1 MPLLTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRD 79 (195)
T ss_dssp -CBCCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTT
T ss_pred CCcCCCCCcCCCcCcccccccccccccccccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 7889999999999999987 6 5999999 789999998889999999999999999999999889
Q ss_pred ceEEEEeCCCHHHHHHHHHhc----CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 65 VKLLGLSCDDVKSHNEWIKDI----EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 65 v~vv~is~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++||.|+.+.+++|++++ +.+++++.|.+..+.+.|++... .| ...|++||||++|+|+
T Consensus 80 v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-----~g--~~~P~~~lid~~G~i~ 145 (195)
T 2bmx_A 80 AQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNA-----DG--VADRVTFIVDPNNEIQ 145 (195)
T ss_dssp EEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCT-----TS--SBCEEEEEECTTSBEE
T ss_pred CEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCccc-----CC--CccceEEEEcCCCeEE
Confidence 999999999999999999998 78889999999999999999642 12 3799999999999984
No 26
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.97 E-value=2.1e-30 Score=168.47 Aligned_cols=123 Identities=18% Similarity=0.423 Sum_probs=110.0
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCC-eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDN-WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~-~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
+.+|+++|+|++++.+| +++++++ +|+ +++|+||+++||+.|+.+++.|.++++++++.++++++||.|+.+.+++|
T Consensus 9 ~~~G~~~p~f~l~~~~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~ 87 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQNQQLVTLRGY-RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIW 87 (160)
T ss_dssp CCTTSBCCCCEEECTTSCEEEGGGG-TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHH
T ss_pred CCCCCCCCCeEeEcCCCCEEeHHHh-cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHH
Confidence 78999999999999999 8999999 777 89999988999999999999999999999888999999999999999999
Q ss_pred HHhcCCCCceeeCC--cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYTPIIADP--NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++.+++++.|. +..+.+.||+.... .+ ++.|++||||++|+|+
T Consensus 88 ~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~----~~--~p~~~~~lid~~G~i~ 135 (160)
T 1xvw_A 88 ATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ----AG--IANRGTFVVDRSGIIR 135 (160)
T ss_dssp HHHHTCCSCEEECTTTTTHHHHHTTCEETT----TT--EECSEEEEECTTSBEE
T ss_pred HHhcCCCceEEecCCcChHHHHHcCCcccc----CC--CeeeeEEEECCCCeEE
Confidence 99999999999995 88999999995322 01 2344999999999984
No 27
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.97 E-value=2.9e-30 Score=176.23 Aligned_cols=122 Identities=16% Similarity=0.175 Sum_probs=108.3
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhH-----HHHHHHHhhhhHHHHcCceEEEEeCCCHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCT-----TELGKMAAYVPEFDKREVKLLGLSCDDVK 76 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~-----~~~~~l~~~~~~~~~~~v~vv~is~d~~~ 76 (133)
.+.+|+++|+|+|++.+| +++|+++ +|+++||+||++.|||.|. .+++.|++. + +|++||+||.|+++
T Consensus 21 ~l~vG~~APdFtL~d~~G~~vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~Ds~~ 94 (224)
T 3keb_A 21 FPRKGDYLPSFMLVDDQKHDAALESF-SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVDSPS 94 (224)
T ss_dssp CCCTTCBCCCCEEEETTSCEEEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESSCHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECCCHH
Confidence 478999999999999999 8999998 7899999999998899999 999999887 4 68999999999999
Q ss_pred HHHHHHHhcCC-CCceeeCC-cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 77 SHNEWIKDIEA-YTPIIADP-NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 77 ~~~~~~~~~~~-~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+++|+++++. ++++++|. ++++++.||+...+. ...| .+.|++||||++|+|+
T Consensus 95 ~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~-~~~G--~~~p~tfvID~dG~I~ 150 (224)
T 3keb_A 95 SLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEY-PLSG--YTSPAIILADAANVVH 150 (224)
T ss_dssp HHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCST-TSTT--CBCCEEEEECTTCBEE
T ss_pred HHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccc-cccC--CccCEEEEEcCCCEEE
Confidence 99999999999 68999998 699999999975431 1123 5799999999999985
No 28
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.97 E-value=1.6e-30 Score=177.88 Aligned_cols=124 Identities=28% Similarity=0.458 Sum_probs=110.5
Q ss_pred CCCCCCCCCceEEecC---CC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 3 GLTIGDSVPNLQVQTN---QG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~---~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
.+.+|+++|+|++++. +| +++|+++ +|+++||+||+++||+.|+.+++.|++++++|+++|++||+||.|+.+..
T Consensus 39 ~l~~G~~aP~f~l~~~~d~~G~~v~l~~~-~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~ 117 (222)
T 3ztl_A 39 VLLPNRPAPEFKGQAVINGEFKEICLKDY-RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSH 117 (222)
T ss_dssp -CCSSEECCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEEecccCCCCcEEeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4789999999999954 55 7999999 88999999987899999999999999999999988999999999999999
Q ss_pred HHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+|++.+ +.+++++.|.+..+.+.||+.... .| ..+|++||||++|+|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~----~g--~~~P~~~lID~~G~I~ 173 (222)
T 3ztl_A 118 LAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEE----DG--NAFRGLFIIDPNGILR 173 (222)
T ss_dssp HHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTT----TS--SBCEEEEEECTTSEEE
T ss_pred HHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecC----CC--CccceEEEECCCCeEE
Confidence 9999987 778899999999999999996432 22 3689999999999984
No 29
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.97 E-value=3.2e-30 Score=173.94 Aligned_cols=125 Identities=26% Similarity=0.478 Sum_probs=112.0
Q ss_pred CCCCCCCCCCceEEecC--CC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHH
Q 044272 2 PGLTIGDSVPNLQVQTN--QG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76 (133)
Q Consensus 2 ~~l~~G~~~p~f~l~~~--~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~ 76 (133)
..+.+|+++|+|++++. +| +++|+++ +|+++||+||+++||+.|+.+++.|++++++++++++++++||.|+.+
T Consensus 4 ~~~~~G~~aP~f~l~~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~ 82 (202)
T 1uul_A 4 GEAEDLHPAPDFNETALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEY 82 (202)
T ss_dssp CCCCTTSBCCCCEEEEECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH
T ss_pred ccccCCCcCCCcEeeeeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 35789999999999987 66 6999999 789999999889999999999999999999999889999999999999
Q ss_pred HHHHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 77 SHNEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 77 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+.+|++++ +.+++++.|.+.++++.||+...+ .| ..+|++||||++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~----~g--~~~P~~~lid~~G~i~ 140 (202)
T 1uul_A 83 SHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEE----DG--VAYRGLFIIDPKQNLR 140 (202)
T ss_dssp HHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCC----CC--ceeeEEEEECCCCEEE
Confidence 999999988 778899999999999999996432 12 4799999999999984
No 30
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.97 E-value=9.2e-31 Score=170.35 Aligned_cols=122 Identities=25% Similarity=0.412 Sum_probs=109.3
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCC--eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDN--WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHN 79 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~--~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~ 79 (133)
.+.+|+++|+|++++.+| +++|+++ +|+ ++||+||+++|||.|+.+++.|+++++++++++ +|++||.|+++.++
T Consensus 6 ~~~~G~~~P~f~l~~~~G~~v~l~~~-~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~ 83 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNEDNDSISLKKI-TENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQK 83 (159)
T ss_dssp CCCTTCBCCSCEEECTTSCEEEHHHH-HHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHH
T ss_pred cCCCCCCCCCeEEECCCCCEEeHHHH-hCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHH
Confidence 478999999999999999 8999999 555 788888889999999999999999999999889 99999999999999
Q ss_pred HHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 80 EWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+|+++++.+++++.|.++++.+.||+.... ..| ..|++||| ++|+|+
T Consensus 84 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p---~~g---~~~~~~li-~~G~i~ 130 (159)
T 2a4v_A 84 KFQSKQNLPYHLLSDPKREFIGLLGAKKTP---LSG---SIRSHFIF-VDGKLK 130 (159)
T ss_dssp HHHHHHTCSSEEEECTTCHHHHHHTCBSSS---SSC---BCCEEEEE-ETTEEE
T ss_pred HHHHHhCCCceEEECCccHHHHHhCCcccc---cCC---ccceEEEE-cCCEEE
Confidence 999999999999999999999999996432 112 46799999 999984
No 31
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.97 E-value=2.4e-30 Score=176.14 Aligned_cols=124 Identities=26% Similarity=0.460 Sum_probs=111.7
Q ss_pred CCCCCCCCCceEEecC--CC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHH
Q 044272 3 GLTIGDSVPNLQVQTN--QG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKS 77 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~--~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~ 77 (133)
.+.+|+++|+|++++. +| +++|+++.+|+++||+||+++||+.|+.+++.|++++++|++++++||+||.|+++.
T Consensus 20 ~l~~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~ 99 (213)
T 2i81_A 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYT 99 (213)
T ss_dssp CCCBTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred cccCCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 4689999999999998 78 599999856789999998899999999999999999999998899999999999999
Q ss_pred HHHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++|++++ +.+++++.|.+.++++.||+..+ .| ..+|++||||++|+|+
T Consensus 100 ~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~-----~g--~~~p~~~lID~~G~i~ 155 (213)
T 2i81_A 100 HLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFD-----DS--VSLRAFVLIDMNGIVQ 155 (213)
T ss_dssp HHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccc-----cC--CcccEEEEECCCCEEE
Confidence 99999988 77889999999999999999641 12 4799999999999985
No 32
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.97 E-value=8.3e-30 Score=174.19 Aligned_cols=124 Identities=23% Similarity=0.439 Sum_probs=110.3
Q ss_pred CCCCCCCCCceEEec---CCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 3 GLTIGDSVPNLQVQT---NQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~---~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
.+.+|+++|+|++++ .+| +++|+++ +|+++||+||+++||+.|+.+++.|++++++|++++++||+||.|+.+..
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~ 104 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSH 104 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 368999999999985 467 7999999 78999999988999999999999999999999999999999999999999
Q ss_pred HHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+|++++ +.+++++.|.+.++++.||+...+ .| ..+|++||||++|+|+
T Consensus 105 ~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~----~g--~~~P~~~liD~~G~I~ 160 (220)
T 1zye_A 105 LAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEG----PG--LALRGLFIIDPNGVIK 160 (220)
T ss_dssp HHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecC----CC--cccceEEEECCCCEEE
Confidence 9999987 677899999999999999996432 12 4799999999999984
No 33
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.97 E-value=5.2e-30 Score=177.06 Aligned_cols=128 Identities=28% Similarity=0.457 Sum_probs=111.1
Q ss_pred CCCCCCCCCCCceEEecC-CC---eeeccc-ccCCCeEEEEEeeCCCCchhH-HHHHHHHhhhhHHHHcCc-eEEEEeCC
Q 044272 1 MPGLTIGDSVPNLQVQTN-QG---NFKLHD-FIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEFDKREV-KLLGLSCD 73 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~-~G---~~~l~d-~~~~~~~vl~f~~~~~c~~C~-~~~~~l~~~~~~~~~~~v-~vv~is~d 73 (133)
|+ +.+|+++|+|++++. +| +++|++ + +||++||+||+++|||.|+ .+++.|++++++++++|+ +|++||.|
T Consensus 1 m~-~~~G~~aP~f~l~~~~~g~~~~v~l~~~~-~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d 78 (241)
T 1nm3_A 1 MS-SMEGKKVPQVTFRTRQGDKWVDVTTSELF-DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN 78 (241)
T ss_dssp ---CCTTSBCCCCEEEEEETTEEEEEEHHHHH-TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CC-ccCCCCCCCeEEEcccCCCceeecHHHHh-CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC
Confidence 44 789999999999996 67 699999 7 8899999999999999999 999999999999999999 99999999
Q ss_pred CHHHHHHHHHhcCCC-CceeeCCcHHHHHHcCCCCCCCCCCCCC-CccceeEEEECCCCccC
Q 044272 74 DVKSHNEWIKDIEAY-TPIIADPNREIIKQLNMVDPDEKDSSGK-QLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~lid~~G~i~ 133 (133)
+++.+++|+++++.. +++++|+++++++.||+...... .|. ....|++||| ++|+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~--~g~~~~~~p~t~li-~~G~i~ 137 (241)
T 1nm3_A 79 DTFVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKED--LGFGKRSWRYSMLV-KNGVVE 137 (241)
T ss_dssp CHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTT--TTCCEEECCEEEEE-ETTEEE
T ss_pred CHHHHHHHHHhcCCCceEEEECCCcHHHHHhCceeeccc--ccCcccceeEEEEE-ECCEEE
Confidence 999999999999987 89999999999999999643211 120 0156999999 999984
No 34
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.97 E-value=9e-30 Score=176.69 Aligned_cols=125 Identities=35% Similarity=0.674 Sum_probs=111.8
Q ss_pred CCCCCCCCceEEecCCCeeec-cccc-CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 4 LTIGDSVPNLQVQTNQGNFKL-HDFI-GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G~~~l-~d~~-~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
+.+|+++|+|++++.+|+++| +++. +|+++||+||+++||++|+.+++.|++++++|+++|++||+||.|+.+...+|
T Consensus 5 ~~iG~~aPdF~l~~~~G~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w 84 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKW 84 (249)
T ss_dssp CCTTSBCCCEEEEETTEEEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHH
Confidence 578999999999999999999 9985 67889999999999999999999999999999999999999999999999988
Q ss_pred HHh------cCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKD------IEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+. .+.++|+++|.+.++++.||+..++. | ....|++||||++|+|+
T Consensus 85 ~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~----g-~~~~p~~fIID~dG~I~ 137 (249)
T 3a2v_A 85 KEWIERHIGVRIPFPIIADPQGTVARRLGLLHAES----A-THTVRGVFIVDARGVIR 137 (249)
T ss_dssp HHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTC----S-SSCCEEEEEECTTSBEE
T ss_pred HHHHHHhcCCCCceeEEECCchHHHHHhCCccccC----C-CcccceEEEECCCCeEE
Confidence 875 46777999999999999999975432 2 13799999999999985
No 35
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.97 E-value=1.1e-29 Score=170.01 Aligned_cols=122 Identities=25% Similarity=0.472 Sum_probs=109.3
Q ss_pred CCCCCCCceEEecC--CC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHH
Q 044272 5 TIGDSVPNLQVQTN--QG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHN 79 (133)
Q Consensus 5 ~~G~~~p~f~l~~~--~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~ 79 (133)
++|+++|+|++++. +| +++|+++.+|+++||+||+++||+.|+.+++.|++++++++++++++++||.|+++.++
T Consensus 1 ~~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~ 80 (192)
T 2h01_A 1 AFQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHL 80 (192)
T ss_dssp CCSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHH
T ss_pred CCCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHH
Confidence 47999999999998 88 59999985678899999889999999999999999999999889999999999999999
Q ss_pred HHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 80 EWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 80 ~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+|++++ +.+++++.|.+.++++.||+... .| ...|++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~-----~g--~~~P~~~liD~~G~i~ 134 (192)
T 2h01_A 81 AWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFN-----ES--VALRAFVLIDKQGVVQ 134 (192)
T ss_dssp HHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET-----TT--EECCEEEEECTTSBEE
T ss_pred HHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCc-----CC--ceeeEEEEEcCCCEEE
Confidence 999988 67789999999999999999531 12 3789999999999984
No 36
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.96 E-value=2.2e-29 Score=169.21 Aligned_cols=124 Identities=27% Similarity=0.501 Sum_probs=110.7
Q ss_pred CCCCCCCCCceEEecC-CC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 3 GLTIGDSVPNLQVQTN-QG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~-~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
.+.+|+++|+|++++. +| +++|+++ +|+++||+||+++||++|+.+++.|++++++++++++++++||.|+.+..
T Consensus 4 ~l~~G~~aP~f~l~~~~~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~ 82 (197)
T 1qmv_A 4 NARIGKPAPDFKATAVVDGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTH 82 (197)
T ss_dssp TBCTTSBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCCCCCCeEeEeecCCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 4789999999999987 65 5999999 78999999888999999999999999999999988999999999999999
Q ss_pred HHHHHhc-------CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDI-------EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+|++++ +.+++++.|.+.++++.||+...+ .+ ...|++||||++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~----~~--~~~P~~~lid~~G~i~ 138 (197)
T 1qmv_A 83 LAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTD----EG--IAYRGLFIIDGKGVLR 138 (197)
T ss_dssp HHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETT----TT--EECEEEEEECTTSBEE
T ss_pred HHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCC----CC--ceeeEEEEECCCCcEE
Confidence 9999987 777899999999999999996322 12 3799999999999984
No 37
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.96 E-value=2.4e-29 Score=167.60 Aligned_cols=123 Identities=29% Similarity=0.518 Sum_probs=110.0
Q ss_pred CCCCCCCCceEEecCC-C----eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 4 LTIGDSVPNLQVQTNQ-G----NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~-G----~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
+.+|+++|+|++++.+ + +++++++ +|+++||+||+++||+.|+.+++.|++++++++++++++++||.|+++.+
T Consensus 1 ~~~G~~~P~f~l~~~~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~ 79 (187)
T 1we0_A 1 SLIGTEVQPFRAQAFQSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVH 79 (187)
T ss_dssp CCTTCBCCCCEEEEECSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCCcCCCeEEeccCCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 4689999999999985 4 6899999 78999999888999999999999999999999988999999999999999
Q ss_pred HHHHHhc----CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDI----EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++|++++ +.+++++.|.+.++++.||+..... | ...|++||||++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~----g--~~~P~~~lid~~G~i~ 132 (187)
T 1we0_A 80 KAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEET----G--LADRGTFIIDPDGVIQ 132 (187)
T ss_dssp HHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTT----T--EECEEEEEECTTSBEE
T ss_pred HHHHHHhccccCCCceEEECCchHHHHHhCCCcCCC----C--ceeeEEEEECCCCeEE
Confidence 9999998 7888999999999999999964321 2 3799999999999984
No 38
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=1.7e-29 Score=172.33 Aligned_cols=117 Identities=11% Similarity=0.242 Sum_probs=108.1
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCe-EEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--------
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNW-TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC-------- 72 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~-~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~-------- 72 (133)
.+++|+++|+|++++.+| +++|+++ +|++ +||+|| ++||+.|+.+++.|.+++++++++|+++|+|+.
T Consensus 31 ~l~~G~~aP~f~l~~~~G~~v~l~~~-~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~ 108 (218)
T 3u5r_E 31 SITLGTRAADFVLPDAGGNLFTLAEF-KDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPE 108 (218)
T ss_dssp CCCTTCBCCCCCEECTTCCEECGGGG-TTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGG
T ss_pred cCCCCCcCCCcEeECCCCCEEeHHHh-CCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccc
Confidence 478999999999999999 8999999 7786 666655 899999999999999999999988999999999
Q ss_pred CCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 73 DDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 73 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|+++.+++|+++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 109 d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v------------~~~P~~~liD~~G~i~ 157 (218)
T 3u5r_E 109 ETLERVGAEVKAYGYGFPYLKDASQSVAKAYGA------------ACTPDFFLYDRERRLV 157 (218)
T ss_dssp GSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTC------------CEESEEEEECTTCBEE
T ss_pred CCHHHHHHHHHHhCCCccEEECCccHHHHHcCC------------CCCCeEEEECCCCcEE
Confidence 789999999999999999999999999999999 4789999999999984
No 39
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.96 E-value=1.8e-29 Score=169.62 Aligned_cols=123 Identities=23% Similarity=0.471 Sum_probs=110.2
Q ss_pred CCCCCCCCceEEecC--CC----eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHH
Q 044272 4 LTIGDSVPNLQVQTN--QG----NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKS 77 (133)
Q Consensus 4 l~~G~~~p~f~l~~~--~G----~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~ 77 (133)
+.+|+++|+|++++. +| +++|+++.+|++++|+||+++||+.|+.+++.|.+++++++++++++++||.|+++.
T Consensus 1 ~~~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~ 80 (198)
T 1zof_A 1 MVVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQV 80 (198)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHH
Confidence 468999999999998 78 599999845788999988899999999999999999999998899999999999999
Q ss_pred HHHHHHh-------cCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKD-------IEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++|+++ ++.+++++.|.+..+.+.||+...+ | .++|++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~-----g--~~~P~~~lid~~G~i~ 136 (198)
T 1zof_A 81 HFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEE-----A--IALRGAFLIDKNMKVR 136 (198)
T ss_dssp HHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETT-----T--EECEEEEEEETTTEEE
T ss_pred HHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccC-----C--cccceEEEECCCCEEE
Confidence 9999998 7788899999999999999995321 2 3799999999999984
No 40
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.96 E-value=4.7e-29 Score=158.91 Aligned_cols=115 Identities=11% Similarity=0.138 Sum_probs=105.6
Q ss_pred CCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHh---hhhHHHHcCceEEEEeCC-CHHHHH
Q 044272 5 TIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAA---YVPEFDKREVKLLGLSCD-DVKSHN 79 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~---~~~~~~~~~v~vv~is~d-~~~~~~ 79 (133)
++|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+ ++++++++++++++|+.| +.+..+
T Consensus 2 ~~G~~~p~f~l~~~~g~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~ 79 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGDNSRMSRL-KAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWA 79 (142)
T ss_dssp CTTSBCCCCEEECTTCCEEEGGGC-CCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHH
T ss_pred CCCCcCCCCEEECCCCCEEEhhhc-CCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHH
Confidence 5899999999999999 8999999 7888888877 9999999999999998 899999889999999998 688899
Q ss_pred HHHHhcCCCCceeeCCcHHHHH--HcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 80 EWIKDIEAYTPIIADPNREIIK--QLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+|+++++.+++++.|.++.+.. .|++ ..+|++||||++|+|+
T Consensus 80 ~~~~~~~~~~~~~~d~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 123 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWNKAGDIRTRQLYDI------------RATPTIYLLDGRKRVI 123 (142)
T ss_dssp HHHTTSCTTCEEEECTTCHHHHTTCSCC------------CSSSEEEEECTTCBEE
T ss_pred HHHHHcCCCcceeeCCccchhhHHHcCC------------CCCCeEEEECCCCCEE
Confidence 9999999999999999988876 8888 4799999999999984
No 41
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.96 E-value=1.6e-29 Score=166.44 Aligned_cols=129 Identities=19% Similarity=0.351 Sum_probs=112.0
Q ss_pred CCCCCCCCCceEEecCC-C-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCce-EEEEeCCCHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQ-G-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVK-LLGLSCDDVKSHN 79 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~-G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~-vv~is~d~~~~~~ 79 (133)
.+++|+++|+|++++.+ + +++|+++.+|+++||+||++.|||.|..+++.+++.+++|+++|++ |++||.|++..++
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~ 92 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMA 92 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHH
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHH
Confidence 47899999999999655 2 7999995488999999999999999999999999999999999996 9999999999999
Q ss_pred HHHHhcCC--CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 80 EWIKDIEA--YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 80 ~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+|+++.+. ++++++|++.+++++||+..++...+.| ....+.+|||| +|+|+
T Consensus 93 ~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g-~~~~R~tfvId-dG~V~ 146 (171)
T 2xhf_A 93 AWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGN-NRSRRYAMLID-DNKIR 146 (171)
T ss_dssp HHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSS-CCBCCEEEEEE-TTEEE
T ss_pred HHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCC-cceEEEEEEEe-CCEEE
Confidence 99999998 7899999999999999998643210111 13678999998 99984
No 42
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.96 E-value=3.3e-29 Score=165.38 Aligned_cols=128 Identities=19% Similarity=0.377 Sum_probs=110.0
Q ss_pred CCCCCCCCceEEecC---------CC--eeecccccCCCeEEEEEeeCCCCchhHH-HHHHHHhhhhHHHHcCc-eEEEE
Q 044272 4 LTIGDSVPNLQVQTN---------QG--NFKLHDFIGDNWTIIFSHPGDFTPVCTT-ELGKMAAYVPEFDKREV-KLLGL 70 (133)
Q Consensus 4 l~~G~~~p~f~l~~~---------~G--~~~l~d~~~~~~~vl~f~~~~~c~~C~~-~~~~l~~~~~~~~~~~v-~vv~i 70 (133)
+++|+++|+.++... +| +++|+++.+|+++||+|||+.|||.|.. +++.+++.+++|+++|+ +|++|
T Consensus 10 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigI 89 (176)
T 4f82_A 10 IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCV 89 (176)
T ss_dssp CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 789999999887543 23 4999997578899999999999999999 99999999999999999 99999
Q ss_pred eCCCHHHHHHHHHhcCCC--CceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 71 SCDDVKSHNEWIKDIEAY--TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 71 s~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|.|++..+++|+++.+.+ +++++|++.+++++||+..++...+.| ....|++||| ++|+|+
T Consensus 90 S~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g-~~s~R~tfII-~dG~I~ 152 (176)
T 4f82_A 90 SVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMG-IRSLRYAMVI-DGGVVK 152 (176)
T ss_dssp ESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCC-EEECCEEEEE-ETTEEE
T ss_pred eCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCccccccCCC-cccccEEEEE-cCCEEE
Confidence 999999999999999998 899999999999999997543211112 1246999999 999984
No 43
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=8.1e-29 Score=159.45 Aligned_cols=118 Identities=16% Similarity=0.212 Sum_probs=107.7
Q ss_pred CCCCCCCCCCceEEecCCC-eeecc--cccCCCeEEEEEeeCCCCch--hHHHHHHHHhhhhHH-HHcCceEEEEeCCC-
Q 044272 2 PGLTIGDSVPNLQVQTNQG-NFKLH--DFIGDNWTIIFSHPGDFTPV--CTTELGKMAAYVPEF-DKREVKLLGLSCDD- 74 (133)
Q Consensus 2 ~~l~~G~~~p~f~l~~~~G-~~~l~--d~~~~~~~vl~f~~~~~c~~--C~~~~~~l~~~~~~~-~~~~v~vv~is~d~- 74 (133)
..+++|+++|+|++++.+| +++|+ ++ +|++++|+|| ++||+. |+.+++.|.++++++ +++++++++|+.|+
T Consensus 3 ~~l~~G~~~p~f~l~~~~g~~~~l~~~~~-~gk~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~ 80 (150)
T 3fw2_A 3 AKSEIGKYAPFFSLPNAKGEKITRSSDAF-KQKSLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVD 80 (150)
T ss_dssp CTTSTTSBCCCCCEEBTTCCEECTTSTTT-TTSEEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSC
T ss_pred ccccCCCcCCccEeECCCCCEEecchhhh-CCCEEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCC
Confidence 3588999999999999999 89999 99 7888888877 789999 999999999999999 77889999999984
Q ss_pred HHHHHHHHHhcCCCCceeeCC---cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 75 VKSHNEWIKDIEAYTPIIADP---NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+..++|+++++.+++++.|. +..+.+.||+ ..+|++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 130 (150)
T 3fw2_A 81 KQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSI------------YKIPANILLSSDGKIL 130 (150)
T ss_dssp HHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC------------CSSSEEEEECTTSBEE
T ss_pred HHHHHHHHHHhCCCceEEEcCcccchHHHHHcCC------------CccCeEEEECCCCEEE
Confidence 588999999999999999998 6699999999 4799999999999984
No 44
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.96 E-value=1.3e-28 Score=158.85 Aligned_cols=118 Identities=15% Similarity=0.269 Sum_probs=108.2
Q ss_pred CCCCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHH
Q 044272 1 MPGLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSH 78 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~ 78 (133)
|. +.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++++++++|+.| +.+..
T Consensus 1 m~-l~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 77 (152)
T 2lrn_A 1 MS-LATGSVAPAITGIDLKGNSVSLNDF-KGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDW 77 (152)
T ss_dssp CC-SCTTEECCCCEEECSSSCEEESGGG-TTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHH
T ss_pred CC-ccCCCcCCCceeEcCCCCEEeHHHc-CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHH
Confidence 54 78999999999999999 8999999 8888888887 8999999999999999999999888999999998 57888
Q ss_pred HHHHHhcCCCCceeeCC---cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDIEAYTPIIADP---NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++|.++++.+++++.|. +..+.+.||+ ..+|++||||++|+|+
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 123 (152)
T 2lrn_A 78 KKAIEEDKSYWNQVLLQKDDVKDVLESYCI------------VGFPHIILVDPEGKIV 123 (152)
T ss_dssp HHHHHHHTCCSEEEEECHHHHHHHHHHTTC------------CSSCEEEEECTTSEEE
T ss_pred HHHHHHhCCCCeEEecccchhHHHHHHhCC------------CcCCeEEEECCCCeEE
Confidence 99999999999999998 6889999999 4689999999999974
No 45
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.96 E-value=3.7e-29 Score=159.89 Aligned_cols=116 Identities=13% Similarity=0.184 Sum_probs=101.4
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNE 80 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~ 80 (133)
.+.+|+.+|+|++ +.+| +++|+++ +|++++|+|| ++||+.|+.+++.|.+++++++++++++++||.| +.+..++
T Consensus 6 ~l~~G~~~P~f~l-~~~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~ 82 (143)
T 4fo5_A 6 GVNPGDLAPRIEF-LGNDAKASFHNQ-LGRYTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTE 82 (143)
T ss_dssp SSSTTSBCCCCCC------CCCSCCS-SCCEEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHH
T ss_pred ccCCcccCCceEE-cCCCCEEEHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHH
Confidence 4789999999999 8899 8999999 7888877777 8999999999999999999998889999999998 6778999
Q ss_pred HHHhcCCCC-ceeeCCc---HHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 81 WIKDIEAYT-PIIADPN---REIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 81 ~~~~~~~~~-~~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++++++.++ +.+.|.. ..+.+.|++ ..+|++||||++|+|+
T Consensus 83 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 127 (143)
T 4fo5_A 83 TVKIDKLDLSTQFHEGLGKESELYKKYDL------------RKGFKNFLINDEGVII 127 (143)
T ss_dssp HHHHHTCCGGGEEECTTGGGSHHHHHTTG------------GGCCCEEEECTTSBEE
T ss_pred HHHHhCCCCceeeecccccchHHHHHcCC------------CCCCcEEEECCCCEEE
Confidence 999999999 8888874 578999999 4799999999999984
No 46
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.96 E-value=4.3e-29 Score=164.71 Aligned_cols=127 Identities=22% Similarity=0.364 Sum_probs=105.3
Q ss_pred CCCCCCCceEEecC----CC------eeecccccCCCeEEEEEeeCCCCchhHHH-HHHHHhhhhHHHHcCce-EEEEeC
Q 044272 5 TIGDSVPNLQVQTN----QG------NFKLHDFIGDNWTIIFSHPGDFTPVCTTE-LGKMAAYVPEFDKREVK-LLGLSC 72 (133)
Q Consensus 5 ~~G~~~p~f~l~~~----~G------~~~l~d~~~~~~~vl~f~~~~~c~~C~~~-~~~l~~~~~~~~~~~v~-vv~is~ 72 (133)
.+|+++|+|++++. +| +++|+++.+|+++||+|||++|||.|+.+ ++.|++++++++++|++ |++||.
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 35569999999987 34 59999954778899999999999999999 99999999999999999 999999
Q ss_pred CCHHHHHHHHHhcCC--CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 73 DDVKSHNEWIKDIEA--YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 73 d~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|+++.+++|+++++. ++++++|+++++++.||+.........|. ...|.+|+|| +|+|+
T Consensus 88 d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~-~~~~~t~~I~-~G~I~ 148 (171)
T 2pwj_A 88 NDPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGI-RSERWSAYVV-DGKVK 148 (171)
T ss_dssp SCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCE-EECCEEEEEE-TTEEE
T ss_pred CCHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCc-ccceeEEEEE-CCEEE
Confidence 999999999999995 68999999999999999974321111121 1367888899 99985
No 47
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.96 E-value=1.4e-28 Score=157.02 Aligned_cols=117 Identities=14% Similarity=0.155 Sum_probs=104.5
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHh---hhhHHHHcCceEEEEeCCC-HHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAA---YVPEFDKREVKLLGLSCDD-VKS 77 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~---~~~~~~~~~v~vv~is~d~-~~~ 77 (133)
.+.+|+++|+|++++.+| +++|+++ +|++++|+|| ++||++|+.+++.|.+ +++++++.++++++|+.|. .+.
T Consensus 4 ~~~~G~~ap~f~l~~~~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~ 81 (142)
T 3eur_A 4 KNRLGTKALNFTYTLDSGVKGTLYQF-PAEYTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDE 81 (142)
T ss_dssp TTCTTSBCCCCEEEETTSCEEETTTC-CCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHH
T ss_pred hhcCCCccCCcEEEcCCCCEeeHHHc-CCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHH
Confidence 467999999999999999 8999999 7888888877 9999999999999999 9999998899999999985 577
Q ss_pred HHHHHHhcCCCCceeeCCcHH--HHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDIEAYTPIIADPNRE--IIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
..++.++++..++.+.|.+.. +.+.|++ ..+|++||||++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 127 (142)
T 3eur_A 82 WKKHRNDFAKEWTNGYDKELVIKNKNLYDL------------RAIPTLYLLDKNKTVL 127 (142)
T ss_dssp HHHHGGGSCTTSEEEECTTCHHHHTTCSCC------------TTCSEEEEECTTCBEE
T ss_pred HHHHHHhcccccccccCccchhhhhhhcCC------------CcCCeEEEECCCCcEE
Confidence 889999999888888887764 6778888 4799999999999984
No 48
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.96 E-value=4.5e-28 Score=155.87 Aligned_cols=117 Identities=13% Similarity=0.230 Sum_probs=107.6
Q ss_pred CCCCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHH
Q 044272 1 MPGLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSH 78 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~ 78 (133)
|+ +.+|+++|+|++++ +| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++|+++++|+.| +.+..
T Consensus 1 m~-l~~G~~~P~f~l~~-~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~ 76 (152)
T 3gl3_A 1 MS-LDKGDKAPDFALPG-KTGVVKLSDK-TGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDA 76 (152)
T ss_dssp -C-CCTTSBCCCCEEEB-SSSEEEGGGG-TTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHH
T ss_pred CC-CCCCCcCCceEeeC-CCCeEeHHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHH
Confidence 44 78999999999999 88 8999999 7888888887 9999999999999999999999989999999998 67888
Q ss_pred HHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+|.++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 77 ~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 119 (152)
T 3gl3_A 77 MKFLAQVPAEFTVAFDPKGQTPRLYGV------------KGMPTSFLIDRNGKVL 119 (152)
T ss_dssp HHHHHHSCCCSEEEECTTCHHHHHTTC------------CSSSEEEEECTTSBEE
T ss_pred HHHHHHcCCCCceeECCcchhHHHcCC------------CCCCeEEEECCCCCEE
Confidence 999999999999999999999999999 4699999999999974
No 49
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.96 E-value=4.6e-29 Score=164.85 Aligned_cols=124 Identities=16% Similarity=0.197 Sum_probs=104.0
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+++|+|++++.+| +++++++ +|+++||+||.+.||+.|+.+++.|++++++ .++++|+||.|+++.+++|
T Consensus 17 ~l~~G~~~P~f~l~~~~G~~v~l~~~-~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~~~~~~~ 92 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTGGDLGVISSDQF-RGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLPFAQKRF 92 (175)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGGG-TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCHHHHTTC
T ss_pred CCCcCCcCCCeEEECCCCCEEeHHHc-CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCHHHHHHH
Confidence 368999999999999999 8999999 8899999998666699999999999999887 6899999999999999999
Q ss_pred HHhcCC-CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++. +++++.|.+..+.+.||+...+. ...| .+.|++||||++|+|+
T Consensus 93 ~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~-~~~g--~~~p~~~lid~~G~I~ 142 (175)
T 1xvq_A 93 CGAEGTENVMPASAFRDSFGEDYGVTIADG-PMAG--LLARAIVVIGADGNVA 142 (175)
T ss_dssp C------CEEEEECTTSSHHHHTTCBBCSS-TTTT--SBCSEEEEECTTSBEE
T ss_pred HHHcCCCCceEeeCCHHHHHHHhCCccccc-ccCC--cccceEEEECCCCeEE
Confidence 999998 78999999999999999965321 1223 4679999999999984
No 50
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.96 E-value=6.5e-29 Score=165.21 Aligned_cols=128 Identities=20% Similarity=0.392 Sum_probs=109.0
Q ss_pred CCCCCCCCceEEec--C---------CC-----eeecccccCCCeEEEEEeeCCCCchhH-HHHHHHHhhhhHH-HHcCc
Q 044272 4 LTIGDSVPNLQVQT--N---------QG-----NFKLHDFIGDNWTIIFSHPGDFTPVCT-TELGKMAAYVPEF-DKREV 65 (133)
Q Consensus 4 l~~G~~~p~f~l~~--~---------~G-----~~~l~d~~~~~~~vl~f~~~~~c~~C~-~~~~~l~~~~~~~-~~~~v 65 (133)
+++|+++|+|++++ . +| +++|+++.+|+++||+||++.|||.|. .+++.+++.++++ +++|+
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~ 80 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNF 80 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999998 3 55 699999448899999999999999999 9999999999999 99999
Q ss_pred e-EEEEeCCCHHHHHHHHHhcCC-CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 66 K-LLGLSCDDVKSHNEWIKDIEA-YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 66 ~-vv~is~d~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
. |++||.|++..+++|+++.+. ++++++|++.+++++||+..++...+.| ....+.+|||| +|+|+
T Consensus 81 ~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g-~~~~R~tfvId-dG~V~ 148 (182)
T 1xiy_A 81 DDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFTDSMNMLVDKSNFFMG-MRPWRFVAIVE-NNILV 148 (182)
T ss_dssp SEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHHHHTTCEEECGGGTCC-EEECCEEEEEE-TTEEE
T ss_pred cEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHHHHhCCceeccccCCC-CceEEEEEEEc-CCEEE
Confidence 6 999999999999999999998 5899999999999999997543211112 12578899999 99984
No 51
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.96 E-value=1e-28 Score=177.20 Aligned_cols=112 Identities=20% Similarity=0.321 Sum_probs=101.6
Q ss_pred CCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 9 SVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 9 ~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
++|+|+|++.+| +++|+|| +||++||+||++.|||.|+.+++.|++. . ..+++|++||.|+++.+++|+++++.
T Consensus 3 k~p~F~l~~~~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~--~~~~~v~gis~D~~~~~~~f~~~~~l 77 (322)
T 4eo3_A 3 RVKHFELLTDEGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSRE--N--FEKAQVVGISRDSVEALKRFKEKNDL 77 (322)
T ss_dssp BCCCCEEEETTSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHS--C--CTTEEEEEEESCCHHHHHHHHHHHTC
T ss_pred CCCCcEEECCCcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHH--h--hCCCEEEEEeCCCHHHHHHHHHhhCC
Confidence 789999999999 8999999 8899999999999999999999999753 2 23799999999999999999999999
Q ss_pred CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 88 YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 88 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++|+++|+++++++.||+... + ...|++||||++|+|+
T Consensus 78 ~fp~l~D~~~~v~~~ygv~~~------~--~~~r~tfiId~~G~i~ 115 (322)
T 4eo3_A 78 KVTLLSDPEGILHEFFNVLEN------G--KTVRSTFLIDRWGFVR 115 (322)
T ss_dssp CSEEEECTTCHHHHHTTCEET------T--EECCEEEEECTTSBEE
T ss_pred ceEEEEcCchHHHHhcCCCCC------C--cCccEEEEECCCCEEE
Confidence 999999999999999999632 2 4689999999999985
No 52
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.96 E-value=5.3e-29 Score=163.00 Aligned_cols=122 Identities=19% Similarity=0.269 Sum_probs=108.0
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+++|+|++++.+| +++++++ +|++++|+||.+.||+.|+.+++.|+++++++ .++++++||.|+++.+++|
T Consensus 17 ~~~~G~~~p~f~l~~~~G~~~~l~~~-~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~~ 93 (167)
T 2jsy_A 17 EVKVGDQAPDFTVLTNSLEEKSLADM-KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQARW 93 (167)
T ss_dssp CCCTTSCCCCCEEEBTTCCEEEHHHH-TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSCC
T ss_pred ccCCCCcCCceEEECCCCCEeeHHHh-CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHHH
Confidence 478999999999999999 8999999 78999999885555999999999999999999 6899999999999989999
Q ss_pred HHhcCC-CCceeeC-CcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIAD-PNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++. +++++.| .+.++.+.||+...+ .| .+.|++||||++|+|+
T Consensus 94 ~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~----~g--~~~p~~~lid~~G~i~ 141 (167)
T 2jsy_A 94 CGANGIDKVETLSDHRDMSFGEAFGVYIKE----LR--LLARSVFVLDENGKVV 141 (167)
T ss_dssp GGGSSCTTEEEEEGGGTCHHHHHTTCBBTT----TC--SBCCEEEEECTTSCEE
T ss_pred HHhcCCCCceEeeCCchhHHHHHhCCcccc----CC--ceeeEEEEEcCCCcEE
Confidence 999999 7899999 888999999996432 22 3579999999999984
No 53
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=2e-27 Score=153.14 Aligned_cols=116 Identities=16% Similarity=0.274 Sum_probs=107.3
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC--HHHHHH
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD--VKSHNE 80 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~--~~~~~~ 80 (133)
+.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++.+.++++++|+.|. .+.+++
T Consensus 2 ~~~G~~~p~~~l~~~~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~ 79 (154)
T 3kcm_A 2 SLEENPAPDFTLNTLNGEVVKLSDL-KGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEE 79 (154)
T ss_dssp -CTTSBCCCCEEECTTSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHH
T ss_pred CCCCCCCCCeEEEcCCCCEEehhhc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHH
Confidence 47899999999999999 8999999 8888888887 89999999999999999999998889999999986 888999
Q ss_pred HHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 81 WIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|.++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 120 (154)
T 3kcm_A 80 FFRKTGFTLPVLLDADKRVGKLYGT------------TGVPETFVIDRHGVIL 120 (154)
T ss_dssp HHHHHCCCCCEEECTTCHHHHHHTC------------CSBCEEEEECTTSBEE
T ss_pred HHHHcCCCeeEEecCchHHHHHhCC------------CCCCeEEEECCCCcEE
Confidence 9999999999999999999999999 4699999999999974
No 54
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.95 E-value=1.1e-27 Score=152.99 Aligned_cols=118 Identities=17% Similarity=0.284 Sum_probs=106.6
Q ss_pred CCCCCCCCCCceEEecCCC-eeecc--cccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHH-HHcCceEEEEeCC-CHH
Q 044272 2 PGLTIGDSVPNLQVQTNQG-NFKLH--DFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF-DKREVKLLGLSCD-DVK 76 (133)
Q Consensus 2 ~~l~~G~~~p~f~l~~~~G-~~~l~--d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~-~~~~v~vv~is~d-~~~ 76 (133)
+.+.+|+++|+|++++.+| .++++ ++ +|++++|+|| ++||+.|+.+++.|.++++++ +++++++++|+.| +.+
T Consensus 3 ~~~~~g~~~p~~~l~~~~g~~~~l~~~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~ 80 (148)
T 3fkf_A 3 AKVTVGKSAPYFSLPNEKGEKLSRSAERF-RNRYLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDRE 80 (148)
T ss_dssp --CCTTSBCCCCCEEBTTSCEECTTSTTT-TTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHH
T ss_pred ccccCCCcCCCeEeeCCCCCEEecccccc-CCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHH
Confidence 4588999999999999999 89999 98 7888888887 999999999999999999999 7778999999998 567
Q ss_pred HHHHHHHhcCCCCceeeCC---cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 77 SHNEWIKDIEAYTPIIADP---NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 77 ~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
..+++.++++.+++++.|. +..+.+.||+ ..+|+++++|++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 128 (148)
T 3fkf_A 81 AWETAIKKDTLSWDQVCDFTGLSSETAKQYAI------------LTLPTNILLSPTGKIL 128 (148)
T ss_dssp HHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC------------CSSSEEEEECTTSBEE
T ss_pred HHHHHHHHcCCCceEEEccCCcchHHHHhcCC------------CCcCEEEEECCCCeEE
Confidence 8999999999999999998 6799999999 4799999999999984
No 55
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.95 E-value=1e-27 Score=157.35 Aligned_cols=128 Identities=13% Similarity=0.217 Sum_probs=107.0
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCc-hhHHHHHHHHhhhhHHHHcC--ceEEEEeCC----C
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTP-VCTTELGKMAAYVPEFDKRE--VKLLGLSCD----D 74 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~-~C~~~~~~l~~~~~~~~~~~--v~vv~is~d----~ 74 (133)
.+.+|+.+|+|++++.+| +++|+++ +|++++|+|| ++||+ .|+.+++.|.++++++++++ ++||+||.| +
T Consensus 6 ~l~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~ 83 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQNQDGKNVSLESL-KGEVWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDK 83 (174)
T ss_dssp CSCCCEECCCCEEECTTSCEEETGGG-TTCCEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred cCccccccCCcEEEcCCCCEEehhhc-CCCEEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCC
Confidence 478999999999999999 8999999 8898888887 88999 99999999999999999886 999999986 6
Q ss_pred HHHHHHHHHhcCCCC---ceeeCCcHHHHHHcCC-----CCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 75 VKSHNEWIKDIEAYT---PIIADPNREIIKQLNM-----VDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 75 ~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++.+++|+++++.++ +++.|.+.++.+.|++ ........ ....+.|++||||++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~lid~~G~i~ 149 (174)
T 1xzo_A 84 PKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGE-DQVIHQSSFYLVGPDGKVL 149 (174)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSC-CSCCSCCEEEEECTTSEEE
T ss_pred HHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCC-CeeeeeeEEEEECCCCeEE
Confidence 889999999999988 8899988877766653 11111111 1125799999999999984
No 56
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.95 E-value=1.3e-27 Score=159.04 Aligned_cols=116 Identities=13% Similarity=0.346 Sum_probs=107.5
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--------C
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC--------D 73 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~--------d 73 (133)
.+.+|+.+|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++ +++++|+. |
T Consensus 6 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d 82 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQF-HEPLLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPED 82 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGGC-CSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGG
T ss_pred cCCCCCCCCCceeecCCCCEEeHHHh-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccccc
Confidence 478999999999999999 8999999 7888888887 889999999999999999999877 99999998 6
Q ss_pred CHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 DVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+.+++|+++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 130 (188)
T 2cvb_A 83 APEKMAAFAEEHGIFFPYLLDETQEVAKAYRA------------LRTPEVFLFDERRLLR 130 (188)
T ss_dssp SHHHHHHHHHHHTCCSCEEECSSSHHHHHTTC------------CEESEEEEECTTCBEE
T ss_pred CHHHHHHHHHHhCCCceEEECCcchHHHHcCC------------CCCCeEEEECCCCcEE
Confidence 78999999999999999999999999999999 4689999999999984
No 57
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.95 E-value=6.3e-28 Score=154.17 Aligned_cols=117 Identities=15% Similarity=0.228 Sum_probs=107.7
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNE 80 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~ 80 (133)
.+.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++++++++|+.| +.+.+++
T Consensus 4 ~~~~G~~~p~~~l~~~~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~ 81 (148)
T 3hcz_A 4 PLLLGKKAPNLYMTDTTGTYRYLYDV-QAKYTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLK 81 (148)
T ss_dssp CCCTTSBCCCCCCBCTTSCBCCGGGC-CCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHH
T ss_pred ccCCCCcCCceEEecCCCCEEEhHHc-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHH
Confidence 578999999999999999 8999999 8888888877 8999999999999999999999889999999998 6788999
Q ss_pred HHHhcCCC-CceeeCCcHH--HHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 81 WIKDIEAY-TPIIADPNRE--IIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 81 ~~~~~~~~-~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|.++++.+ ++++.|.+.. +.+.|++ ..+|++++||++|+|+
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~~~~~~~~i------------~~~P~~~lid~~G~i~ 125 (148)
T 3hcz_A 82 FIRSKKIGGWLNVRDSKNHTDFKITYDI------------YATPVLYVLDKNKVII 125 (148)
T ss_dssp HHHHHTCTTSEEEECTTCCCCHHHHHCC------------CSSCEEEEECTTCBEE
T ss_pred HHHHcCCCCceEEeccccchhHHHhcCc------------CCCCEEEEECCCCcEE
Confidence 99999998 7999998887 9999999 4699999999999974
No 58
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.95 E-value=5.7e-28 Score=156.37 Aligned_cols=115 Identities=17% Similarity=0.253 Sum_probs=104.0
Q ss_pred CCCCCCCceEEecC--CC-eeecccccCCCeEEEEEeeCCCCchhHHH-HHHHHhhhhHHHHcCceEEEEeC-------C
Q 044272 5 TIGDSVPNLQVQTN--QG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTE-LGKMAAYVPEFDKREVKLLGLSC-------D 73 (133)
Q Consensus 5 ~~G~~~p~f~l~~~--~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~-~~~l~~~~~~~~~~~v~vv~is~-------d 73 (133)
+.|+++|+|++++. +| +++++++ +|++++|+|| ++||+.|+.+ ++.|.++++++++.++++++|+. +
T Consensus 1 s~g~~aP~f~l~~~~~~g~~~~l~~~-~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~ 78 (158)
T 3eyt_A 1 SNAMKAPELQIQQWFNSATDLTLADL-RGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAM 78 (158)
T ss_dssp CCCEECCCCCEEEEESCSSCCCTGGG-TTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGS
T ss_pred CCCCcCCCceehhhhcCCCccCHHHh-CCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccC
Confidence 36999999999994 77 8999999 7888888887 8999999996 99999999999888999999995 5
Q ss_pred CHHHHHHHHHhcCCCCceeeCCcH-----HHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 DVKSHNEWIKDIEAYTPIIADPNR-----EIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+.+++|+++++.+++++.|.+. .+.+.||+ ..+|++||||++|+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 131 (158)
T 3eyt_A 79 TPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQM------------RGTPSLLLIDKAGDLR 131 (158)
T ss_dssp CHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTC------------CSSSEEEEECTTSEEE
T ss_pred CHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCC------------CCCCEEEEECCCCCEE
Confidence 899999999999999999999887 79999999 4699999999999974
No 59
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.95 E-value=1.7e-27 Score=159.23 Aligned_cols=117 Identities=14% Similarity=0.251 Sum_probs=107.2
Q ss_pred CCCCCCCCCceEEe-cCCC-eeecccccCCCe-EEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC-------
Q 044272 3 GLTIGDSVPNLQVQ-TNQG-NFKLHDFIGDNW-TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC------- 72 (133)
Q Consensus 3 ~l~~G~~~p~f~l~-~~~G-~~~l~d~~~~~~-~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~------- 72 (133)
.+.+|+.+|+|+++ +.+| +++++++ +|++ ++|+|| ++||+.|+.+++.|++++++++++++++++|+.
T Consensus 17 ~~~~g~~~p~f~l~~~~~G~~~~l~~~-~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~ 94 (196)
T 2ywi_A 17 MFPLGKQAPPFALTNVIDGNVVRLEDV-KSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYP 94 (196)
T ss_dssp CCCTTCBCCCCEEEETTTCCEEEHHHH-CCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCG
T ss_pred CCCcCCcCCceeeeecCCCCEEeHHHh-CCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 46899999999999 9999 8999999 7775 666665 999999999999999999999988999999998
Q ss_pred -CCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 73 -DDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 73 -d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|+.+.+++|+++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 95 ~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 144 (196)
T 2ywi_A 95 EDSPENMKKVAEELGYPFPYLYDETQEVAKAYDA------------ACTPDFYIFDRDLKCV 144 (196)
T ss_dssp GGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTC------------CEESEEEEEETTCBEE
T ss_pred ccCHHHHHHHHHHcCCCceEEECCchHHHHHhCC------------CCCCeEEEEcCCCeEE
Confidence 678999999999999999999999999999999 4799999999999974
No 60
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.95 E-value=6.8e-28 Score=156.21 Aligned_cols=118 Identities=15% Similarity=0.261 Sum_probs=105.3
Q ss_pred CCCCCCCCCCCceEEec-CCC-eeecccccCCCeEEEEEeeCCCCchhHHH-HHHHHhhhhHHHHcCceEEEEeC-----
Q 044272 1 MPGLTIGDSVPNLQVQT-NQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTE-LGKMAAYVPEFDKREVKLLGLSC----- 72 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~-~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~-~~~l~~~~~~~~~~~v~vv~is~----- 72 (133)
|..+ .|.++|+|++++ .+| +++++++ +|++++|+|| ++||+.|..+ ++.|.+++++++++++++++|+.
T Consensus 1 ms~~-~g~~~p~~~~~~~~~g~~~~l~~~-~gk~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~ 77 (160)
T 3lor_A 1 MSSL-DNAPLLELDVQEWVNHEGLSNEDL-RGKVVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHH 77 (160)
T ss_dssp ---C-TTCCBCCCCEEEESSSCCCCHHHH-TTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCG
T ss_pred Cccc-CCCcCCCcccccccCCCccCHHHh-CCCEEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecccccc
Confidence 5544 699999999999 789 8999999 7888888877 7799999995 99999999999988999999997
Q ss_pred --CCHHHHHHHHHhcCCCCceeeCCcHH------HHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 73 --DDVKSHNEWIKDIEAYTPIIADPNRE------IIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 73 --d~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|+.+.+++|+++++.+++++.|.... +.+.||+ ..+|++||||++|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 134 (160)
T 3lor_A 78 DVMTPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRL------------EGTPSIILADRKGRIR 134 (160)
T ss_dssp GGSCHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTC------------CSSSEEEEECTTSBEE
T ss_pred ccCCHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhccc------------CccceEEEECCCCcEE
Confidence 68999999999999999999998887 9999999 4699999999999974
No 61
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.95 E-value=2.3e-27 Score=152.56 Aligned_cols=115 Identities=17% Similarity=0.406 Sum_probs=105.8
Q ss_pred CCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHHHH
Q 044272 5 TIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNEWI 82 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~~~ 82 (133)
++|+++|+|++++.+| .++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++++++++|+.| +.+.+++|+
T Consensus 1 ~~G~~~p~~~l~~~~g~~~~l~~~-~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 1 SEGSDAPNFVLEDTNGKRIELSDL-KGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp -CCEECCCCEEECTTCCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred CCCCcCCcceeEcCCCCEEEHHHc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 3799999999999999 8999999 8888888887 8999999999999999999999889999999986 678899999
Q ss_pred HhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 83 KDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 83 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++++.+++++.|.+..+.+.|++ ..+|++|+||++|+|+
T Consensus 79 ~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 117 (151)
T 2f9s_A 79 KSYGVNFPVVLDTDRQVLDAYDV------------SPLPTTFLINPEGKVV 117 (151)
T ss_dssp HHHTCCSCEEEETTSHHHHHTTC------------CSSCEEEEECTTSEEE
T ss_pred HHcCCCceEEECCchHHHHhcCC------------CCCCeEEEECCCCcEE
Confidence 99999999999999999999999 4799999999999874
No 62
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.95 E-value=3.6e-27 Score=156.29 Aligned_cols=119 Identities=18% Similarity=0.276 Sum_probs=106.9
Q ss_pred CCCCCCCCceEEecC--CC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCc------eEEEEeCCC
Q 044272 4 LTIGDSVPNLQVQTN--QG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREV------KLLGLSCDD 74 (133)
Q Consensus 4 l~~G~~~p~f~l~~~--~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v------~vv~is~d~ 74 (133)
+.+|+++|+|++++. +| +++|+++ +|++++|+|| ++||+.|+.+++.|.+++++++++++ ++++|+.|+
T Consensus 31 ~~~g~~~p~f~l~~~~~~g~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 31 EADRQQLPDIGGDSLMEEGTQINLSDF-ENQVVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp GGGCCCCCCCEEEBSSSTTCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC
T ss_pred cccCCCCCceeccccccCCcEecHHHh-CCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC
Confidence 578999999999999 99 8999999 8888888887 89999999999999999999999899 999999986
Q ss_pred --HHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 75 --VKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 75 --~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+..++|+++++.+++++.|.+..+.+.|+.+.. ..+|++||||++|+|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v---------~~~P~~~lid~~G~i~ 160 (183)
T 3lwa_A 109 YSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPA---------SVIPTTIVLDKQHRPA 160 (183)
T ss_dssp CCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCT---------TCCSEEEEECTTSCEE
T ss_pred CCHHHHHHHHHHcCCCccEEECCcchHHHHhccCCC---------CCCCeEEEECCCCcEE
Confidence 8999999999999999999999999999875321 3699999999999984
No 63
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=8.9e-27 Score=149.91 Aligned_cols=115 Identities=14% Similarity=0.266 Sum_probs=105.8
Q ss_pred CCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe--CCCHHHHHHH
Q 044272 5 TIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS--CDDVKSHNEW 81 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is--~d~~~~~~~~ 81 (133)
.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++++.+++|+ .|+.+.+++|
T Consensus 3 ~~G~~~p~~~l~~~~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 3 LDSKTAPAFSLPDLHGKTVSNADL-QGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp -CCTTCCSCEEECTTSCEEEHHHH-TTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCCCCCCcEeecCCCCCccHHHh-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 5799999999999999 8999999 8888888877 89999999999999999999998899999999 4689999999
Q ss_pred HHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~i------------~~~P~~~lid~~G~i~ 120 (153)
T 2l5o_A 81 VKDYGLPFTVMYDADKAVGQAFGT------------QVYPTSVLIGKKGEIL 120 (153)
T ss_dssp HHHTTCCSEEEECSSCHHHHHHTC------------CSSSEEEEECSSSCCC
T ss_pred HHHcCCCceEEcCchHHHHHHcCC------------CccCeEEEECCCCcEE
Confidence 999999999999999999999999 4689999999999984
No 64
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=158.54 Aligned_cols=130 Identities=9% Similarity=0.146 Sum_probs=100.9
Q ss_pred CCCCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC------
Q 044272 1 MPGLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD------ 73 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d------ 73 (133)
|+.+.+|+++|+|++++.+| +++++++ +|++++|+|| ++|||.|+.+++.|++++++++++++++++||.|
T Consensus 20 ~~~~~~g~~~p~f~l~~~~G~~v~l~~~-~Gk~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~ 97 (185)
T 2gs3_A 20 FQSMRCARSMHEFSAKDIDGHMVNLDKY-RGFVCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 97 (185)
T ss_dssp SGGGGGCCCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred hhhccCCCCcCCceeEcCCCCEeeHHHc-CCCEEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCC
Confidence 34578999999999999999 8999999 8888877776 8999999999999999999999889999999975
Q ss_pred --CHHHHHHHHHhcCCCCceee--CCcHH----HHHHcCCCCCCCCCCCC-CCccceeEEEECCCCccC
Q 044272 74 --DVKSHNEWIKDIEAYTPIIA--DPNRE----IIKQLNMVDPDEKDSSG-KQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 --~~~~~~~~~~~~~~~~~~~~--d~~~~----~~~~~~~~~~~~~~~~~-~~~~~p~~~lid~~G~i~ 133 (133)
+++.+++|+++++.+++++. |.++. +.+.+...... .+..+ ...+.|++||||++|+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~-~g~~~~~i~~~P~~~lid~~G~i~ 165 (185)
T 2gs3_A 98 PGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKG-KGILGNAIKWNFTKFLIDKNGCVV 165 (185)
T ss_dssp CSCHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGG-CCSSSSSCCSSCCEEEECTTSCEE
T ss_pred CCCHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhccc-ccccCCcccccceEEEECCCCCEE
Confidence 57889999999999998886 44433 33322211000 00001 113579999999999984
No 65
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=6.3e-27 Score=151.29 Aligned_cols=114 Identities=11% Similarity=0.102 Sum_probs=99.9
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHH
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEW 81 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~ 81 (133)
...|+.+|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++|+++++|+.|+ .+..++|
T Consensus 9 ~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~ 86 (152)
T 2lrt_A 9 KIKEASIIDIQLKDLKGNTRSLTDL-KGKVVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTS 86 (152)
T ss_dssp SSCTTCSCCCCEEBTTSCEECTTTG-GGSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHH
T ss_pred hccCCCCCCeEEEcCCCCEEeHHHh-CCCEEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHH
Confidence 46899999999999999 8999999 7888888887 78999999999999999999998899999999985 4455666
Q ss_pred HHhcCCCCceeeCCcHH---HHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYTPIIADPNRE---IIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
... .+++++.|.++. +.+.|++ ...|++||||++|+|+
T Consensus 87 ~~~--~~~~~~~d~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 127 (152)
T 2lrt_A 87 ADN--LPWVCVRDANGAYSSYISLYNV------------TNLPSVFLVNRNNELS 127 (152)
T ss_dssp HTT--CSSEEEECSSGGGCHHHHHHTC------------CSCSEEEEEETTTEEE
T ss_pred HhC--CCceEEECCCCcchHHHHHcCc------------ccCceEEEECCCCeEE
Confidence 644 567999998886 9999999 3689999999999984
No 66
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.95 E-value=5.1e-27 Score=155.87 Aligned_cols=121 Identities=13% Similarity=0.230 Sum_probs=107.0
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC--HHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD--VKSHN 79 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~--~~~~~ 79 (133)
.+.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++++.++++++|+.|. .+..+
T Consensus 33 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 110 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDADGKPKKLSDF-RGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 110 (186)
T ss_dssp ECCSCCBCCCCEEECTTSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHH
T ss_pred cccCCCcCCCcEeEcCCCCEeeHHHc-CCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHH
Confidence 367899999999999999 8999999 8888888887 89999999999999999999987789999999985 47889
Q ss_pred HHHHhcCCC-CceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 80 EWIKDIEAY-TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 80 ~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+|+++++.. ++++.|.+..+.+.|++... ...+|++||||++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--------~~~~P~~~lid~~G~i~ 157 (186)
T 1jfu_A 111 TFLKEANLTRLGYFNDQKAKVFQDLKAIGR--------ALGMPTSVLVDPQGCEI 157 (186)
T ss_dssp HHHHHTTCCTTCCEECTTCHHHHHHHTTTC--------CSSSSEEEEECTTSBEE
T ss_pred HHHHHcCCCCCceEECCcchHHHHhccccc--------cCCCCEEEEECCCCCEE
Confidence 999999984 69999999999999998521 13689999999999984
No 67
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.95 E-value=4.6e-27 Score=153.51 Aligned_cols=122 Identities=8% Similarity=0.102 Sum_probs=98.2
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC--------
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-------- 73 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-------- 73 (133)
.+++|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|++++++++++++++++|+.|
T Consensus 4 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~ 81 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDINGVDVSLEKY-RGHVCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPW 81 (169)
T ss_dssp ---CCCSGGGCEEEBTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cccCCcccccceeecCCCCCccHHHc-CCCEEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCC
Confidence 478999999999999999 8999999 8888888887 7899999999999999999999889999999975
Q ss_pred CHHHHHHH-HHhcCCCCceee--CCcHHHHH-Hc--------CCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 DVKSHNEW-IKDIEAYTPIIA--DPNREIIK-QL--------NMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~-~~~~~~~~~~~~--d~~~~~~~-~~--------~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+.+++| .++++.+++++. |.++.... .| |+... ...++|++||||++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~-------~i~~~P~~~lid~~G~i~ 146 (169)
T 2v1m_A 82 AEAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTN-------NIKWNFSKFLVDRQGQPV 146 (169)
T ss_dssp CHHHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSC-------SCCSTTCEEEECTTSCEE
T ss_pred CHHHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCC-------cccccceEEEECCCCCEE
Confidence 57889999 599999998886 65543321 22 44210 013579999999999984
No 68
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=1.2e-26 Score=149.14 Aligned_cols=118 Identities=14% Similarity=0.287 Sum_probs=106.7
Q ss_pred CCCCCCCCCCC-ceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHH
Q 044272 1 MPGLTIGDSVP-NLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKS 77 (133)
Q Consensus 1 m~~l~~G~~~p-~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~ 77 (133)
|. +.+|+++| +|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++.++++.+++|+.|. .+.
T Consensus 1 m~-l~~G~~~p~~f~l~~~~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 77 (152)
T 2lja_A 1 MS-LRSGNPSAASFSYPDINGKTVSLADL-KGKYIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKA 77 (152)
T ss_dssp CC-TTTTCCCSSSCEEEETTTEEEESTTT-TTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHH
T ss_pred Cc-cccCCCCCcccEeecCCCCEeeHHHc-CCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHH
Confidence 54 89999999 999999999 8999999 7888888877 89999999999999999999988889999999875 678
Q ss_pred HHHHHHhcCCCC-ceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDIEAYT-PIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
..+|.++++..+ +++.|.+..+.+.|++ ..+|+++|+|++|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 122 (152)
T 2lja_A 78 WENMVTKDQLKGIQLHMGTDRTFMDAYLI------------NGIPRFILLDRDGKII 122 (152)
T ss_dssp HHHHHHHHTCCSEEEECSSCTHHHHHTTC------------CSSCCEEEECTTSCEE
T ss_pred HHHHHHhcCCCCceeecCcchhHHHHcCc------------CCCCEEEEECCCCeEE
Confidence 899999999887 8888888999999999 4689999999999874
No 69
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.94 E-value=2.7e-26 Score=151.14 Aligned_cols=126 Identities=12% Similarity=0.178 Sum_probs=99.5
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCc-hhHHHHHHHHhhhhHHHHcC--ceEEEEeC----CCH
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTP-VCTTELGKMAAYVPEFDKRE--VKLLGLSC----DDV 75 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~-~C~~~~~~l~~~~~~~~~~~--v~vv~is~----d~~ 75 (133)
..+|.++|+|+|+|++| +++|+++ +||++||+|| .+||| .|+.++++|.++++.+++.+ +++|+||. |++
T Consensus 6 ~P~~~~~PdF~L~d~~G~~v~l~d~-~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp 83 (170)
T 4hde_A 6 KPLNWDLETFQFTNQDGKPFGTKDL-KGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKP 83 (170)
T ss_dssp SCCCBCCCCCEEECTTSCEEEHHHH-TTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCH
T ss_pred cCCCCcCCCcEEECCCCCEEeHHHh-CCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccH
Confidence 46799999999999999 8999999 8999988887 67786 89999999999999997654 88999996 578
Q ss_pred HHHHHHHHhcCCCC---ceeeCCcH-H----HHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 76 KSHNEWIKDIEAYT---PIIADPNR-E----IIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 76 ~~~~~~~~~~~~~~---~~~~d~~~-~----~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+++|+++++.++ .++.+... . ....|+..... ...+...|.|++||||++|+|+
T Consensus 84 ~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~--~~~~~~~H~~~~~liD~~G~i~ 147 (170)
T 4hde_A 84 ENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDK--PENGQVIHGTSFYLIDQNGKVM 147 (170)
T ss_dssp HHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBC--CTTSCCBCCCEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccC--CCCceEEeeeEEEEEcCCCeEE
Confidence 99999999998766 45555432 2 22345554322 2234446899999999999985
No 70
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=2.8e-27 Score=153.49 Aligned_cols=115 Identities=17% Similarity=0.282 Sum_probs=106.0
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+.+|+.+|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++++.++.+++|+.|. ...+|
T Consensus 14 ~~~~G~~~p~f~l~~~~g~~~~l~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~~~~ 89 (158)
T 3hdc_A 14 LVRTGALAPNFKLPTLSGENKSLAQY-RGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--RFPEK 89 (158)
T ss_dssp CCCTTSBCCCCEEECTTSCEEESGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--SCCGG
T ss_pred ccCCCCcCCCceeEcCCCCEEehHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--HHHHH
Confidence 478999999999999999 8999999 7888888887 99999999999999999999988889999999987 57789
Q ss_pred HHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 90 ~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 129 (158)
T 3hdc_A 90 YRRAPVSFNFLSDATGQVQQRYGA------------NRLPDTFIVDRKGIIR 129 (158)
T ss_dssp GGGCCCSCEEEECTTSHHHHHTTC------------CSSSEEEEECTTSBEE
T ss_pred HHHcCCCceEEECchHHHHHHhCC------------CCcceEEEEcCCCCEE
Confidence 999999999999999999999999 4699999999999984
No 71
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.94 E-value=1.1e-26 Score=152.96 Aligned_cols=124 Identities=10% Similarity=0.278 Sum_probs=101.2
Q ss_pred CCCCCCC-ceEEecCCC-eeecccccCCCeEEEEEeeCCCCc-hhHHHHHHHHhhhhHHHH--cCceEEEEeCC---CHH
Q 044272 5 TIGDSVP-NLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTP-VCTTELGKMAAYVPEFDK--REVKLLGLSCD---DVK 76 (133)
Q Consensus 5 ~~G~~~p-~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~-~C~~~~~~l~~~~~~~~~--~~v~vv~is~d---~~~ 76 (133)
++|+++| +|++++.+| +++|+++ +||+++|+|| ++||| .|+.+++.|+++++++++ .++++|+||.| +++
T Consensus 2 ~~G~~~P~~f~l~d~~G~~v~l~~~-~Gk~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~ 79 (170)
T 3me7_A 2 SLGTYVPGDITLVDSYGNEFQLKNL-KGKPIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE 79 (170)
T ss_dssp CTTCBCCTTCEEEETTCCEEEGGGG-TTSCEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH
T ss_pred CCCCcCCCCeEEEcCCcCEEchHHh-CCCEEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH
Confidence 5899999 999999999 8999999 7888888877 78897 799999999999999975 46999999975 789
Q ss_pred HHHHHHHhcCCCCc---ee--eC--CcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 77 SHNEWIKDIEAYTP---II--AD--PNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 77 ~~~~~~~~~~~~~~---~~--~d--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+++|+++++..++ ++ .| ...++++.||+.... ..+...+.|++||||++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~lID~~G~i~ 140 (170)
T 3me7_A 80 DIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT---AGNDFIHPNVVVVLSPELQIK 140 (170)
T ss_dssp HHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEE---ETTEEECCCEEEEECTTSBEE
T ss_pred HHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEec---CCCccccCceEEEECCCCeEE
Confidence 99999999998773 32 23 345788888875322 112235889999999999985
No 72
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.94 E-value=2.9e-27 Score=158.00 Aligned_cols=125 Identities=11% Similarity=0.179 Sum_probs=98.0
Q ss_pred CCCCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC------
Q 044272 1 MPGLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD------ 73 (133)
Q Consensus 1 m~~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d------ 73 (133)
|..++.|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|++++++++++++++++|+.|
T Consensus 19 ~s~~~~~~~~p~f~l~~~~G~~~~l~~~-~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 96 (190)
T 2vup_A 19 GSHMSAASSIFDFEVLDADHKPYNLVQH-KGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQE 96 (190)
T ss_dssp -----CCCSGGGSCCBBTTSSBCCGGGG-TTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCC
T ss_pred cccCCCCCcccCeEEEcCCCCEEEHHHc-CCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCC
Confidence 34678999999999999999 8999999 8898888887 8999999999999999999999889999999987
Q ss_pred --CHHHHHHHH-HhcCCCCceee--CCcHHH----HH-----HcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 --DVKSHNEWI-KDIEAYTPIIA--DPNREI----IK-----QLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 --~~~~~~~~~-~~~~~~~~~~~--d~~~~~----~~-----~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++.+++|+ ++++.+++++. |.++.. .+ .|++... ....+.|++||||++|+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~------P~i~~~~~~~lid~~G~i~ 164 (190)
T 2vup_A 97 PGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKT------KAIKWNFTSFLIDRDGVPV 164 (190)
T ss_dssp CSCHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGC------CSCCSTTCEEEECTTSCEE
T ss_pred CCCHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCC------ccccccceEEEECCCCcEE
Confidence 788999999 89999998886 444432 21 2355210 0001234999999999984
No 73
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.94 E-value=6.5e-27 Score=155.31 Aligned_cols=128 Identities=9% Similarity=0.119 Sum_probs=100.8
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC--------
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-------- 73 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-------- 73 (133)
.+++|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|++++++++++++++++|+.|
T Consensus 20 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~ 97 (183)
T 2obi_A 20 DWRCARSMHEFSAKDIDGHMVNLDKY-RGFVCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPG 97 (183)
T ss_dssp CGGGCCSGGGCEEEBTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred CCcccCcccceEEEcCCCCEeeHHHc-CCCEEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCC
Confidence 468999999999999999 8999999 8888888776 8999999999999999999999889999999975
Q ss_pred CHHHHHHHHHhcCCCCceee--CCcHHH----HHHcCCCCCCCCCCCC-CCccceeEEEECCCCccC
Q 044272 74 DVKSHNEWIKDIEAYTPIIA--DPNREI----IKQLNMVDPDEKDSSG-KQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~--d~~~~~----~~~~~~~~~~~~~~~~-~~~~~p~~~lid~~G~i~ 133 (133)
+++.+++|+++++.+++++. |.++.. .+.++..... .+..+ ...++|++||||++|+|+
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~-~g~~~~~i~~~P~~~lid~~G~i~ 163 (183)
T 2obi_A 98 SNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKG-KGILGNAIKWNFTKFLIDKNGCVV 163 (183)
T ss_dssp CHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTT-CCSSSSSCCSTTCEEEECTTSCEE
T ss_pred CHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCC-CCcccccccccceEEEECCCCCEE
Confidence 68899999999999998887 655432 2222111000 00001 113579999999999984
No 74
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.9e-27 Score=156.91 Aligned_cols=117 Identities=9% Similarity=0.172 Sum_probs=93.6
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC--------
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-------- 73 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-------- 73 (133)
.+++|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|++++++++++++++++|+.|
T Consensus 22 ~~~~g~~~p~f~l~~~~G~~~~l~~~-~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~ 99 (181)
T 2p31_A 22 SMQQEQDFYDFKAVNIRGKLVSLEKY-RGSVSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 99 (181)
T ss_dssp -----CCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCS
T ss_pred cCCcCCccCceEeecCCCCEecHHHc-CCCEEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCC
Confidence 468999999999999999 8999999 8888877776 8899999999999999999999889999999985
Q ss_pred CHHHHHHHHHh-cCCCCceeeC--CcHHHHH---HcCCCCCCCCCCCCCCccce-------eEEEECCCCccC
Q 044272 74 DVKSHNEWIKD-IEAYTPIIAD--PNREIIK---QLNMVDPDEKDSSGKQLPSR-------ALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~~~~-~~~~~~~~~d--~~~~~~~---~~~~~~~~~~~~~~~~~~~p-------~~~lid~~G~i~ 133 (133)
+.+.+++|+++ ++.++|++.| .++.... .|++ ...| ++||||++|+|+
T Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~------------~~~P~~~~~~~~~~lid~~G~i~ 160 (181)
T 2p31_A 100 SNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLA------------QTSGKEPTWNFWKYLVAPDGKVV 160 (181)
T ss_dssp CHHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHH------------HHHSCCCCSTTCEEEECTTSCEE
T ss_pred CHHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhh------------hcCCCccccceeEEEEcCCCCEE
Confidence 68899999999 9999998863 3332211 2223 1345 899999999984
No 75
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.94 E-value=4.8e-26 Score=148.02 Aligned_cols=122 Identities=15% Similarity=0.269 Sum_probs=106.2
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNE 80 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~ 80 (133)
.+.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++++++++++|+.|+ .+...+
T Consensus 7 ~~~~g~~~p~~~l~~~~g~~~~l~~~-~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~ 84 (165)
T 3or5_A 7 ADARPTPAPSFSGVTVDGKPFSSASL-KGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKN 84 (165)
T ss_dssp CCCCCCBCCCCEEECTTSCEEEGGGG-TTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHH
T ss_pred hhcCCCCCCCceeeCCCCCEechhHc-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHH
Confidence 468999999999999999 8999999 7888888887 99999999999999999999998889999999875 888999
Q ss_pred HHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 81 WIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 81 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
|+++++.+++++.|.. .+.+.|+..... + ...+|++||||++|+|+
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~-i~~~P~~~lid~~G~i~ 130 (165)
T 3or5_A 85 YMKTQGIIYPVMMATP-ELIRAFNGYIDG-----G-ITGIPTSFVIDASGNVS 130 (165)
T ss_dssp HHHHHTCCSCEEECCH-HHHHHHHTTSTT-----C-SCSSSEEEEECTTSBEE
T ss_pred HHHHcCCCCceEecCH-HHHHHHhhhhcc-----C-CCCCCeEEEECCCCcEE
Confidence 9999999999999865 888888543211 0 14799999999999974
No 76
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.94 E-value=3.9e-26 Score=150.89 Aligned_cols=114 Identities=16% Similarity=0.341 Sum_probs=102.0
Q ss_pred CCCCCCCCCCceEEecCCC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC-CCHHH
Q 044272 2 PGLTIGDSVPNLQVQTNQG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC-DDVKS 77 (133)
Q Consensus 2 ~~l~~G~~~p~f~l~~~~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~-d~~~~ 77 (133)
+.+.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|++++++ ++++++|+. |+.+.
T Consensus 28 ~~~~~G~~~P~f~l~~~~g~~~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~ 101 (176)
T 3kh7_A 28 PSALIGKPFPAFDLPSVQDPARRLTEADL-KGKPALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAA 101 (176)
T ss_dssp TTTTTTSBCCCCEEEBSSCTTSEEEGGGG-CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHH
T ss_pred cccccCCcCCCcEecccCCCCceecHHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHH
Confidence 4578999999999999987 4999999 7888888887 89999999999999988665 799999995 78999
Q ss_pred HHHHHHhcCCCCc-eeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDIEAYTP-IIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
..+|+++++.+++ ++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 102 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 146 (176)
T 3kh7_A 102 AIKWLNELHNPYLLSISDADGTLGLDLGV------------YGAPETYLIDKQGIIR 146 (176)
T ss_dssp HHHHHHHTTCCCSEEEEETTCHHHHHHTC------------CSSCEEEEECTTCBEE
T ss_pred HHHHHHHcCCCCceEEECCcchHHHHcCC------------CCCCeEEEECCCCeEE
Confidence 9999999999885 688999999999999 4689999999999984
No 77
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.94 E-value=2.4e-26 Score=146.18 Aligned_cols=116 Identities=16% Similarity=0.294 Sum_probs=104.0
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC----CHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD----DVKS 77 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d----~~~~ 77 (133)
.+.+|+.+|+|++++.+| .+++++ +|++++|+|| ++||+.|+.+++.|.++++++++.++++++|+.| +.+.
T Consensus 8 ~~~~g~~~p~~~l~~~~g~~~~l~~--~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~ 84 (145)
T 3erw_A 8 EEKQPAVPAVFLMKTIEGEDISIPN--KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQV 84 (145)
T ss_dssp ----CCSCCEEEEECTTSCEEEESC--TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHH
T ss_pred cccCCCcCCCceeecCCCCEEeHHH--CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHH
Confidence 467999999999999999 899999 6788888888 9999999999999999999998778999999985 7899
Q ss_pred HHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++|.++++.+++++.|.+..+.+.|++ ..+|+++++|++|+|+
T Consensus 85 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 128 (145)
T 3erw_A 85 VEDFIKANKLTFPIVLDSKGELMKEYHI------------ITIPTSFLLNEKGEIE 128 (145)
T ss_dssp HHHHHHHTTCCSCEEECSSSHHHHHTTC------------CEESEEEEECTTCCEE
T ss_pred HHHHHHHcCCceeEEEcCchhHHHhcCc------------CccCeEEEEcCCCcEE
Confidence 9999999999999999999999999999 4799999999999973
No 78
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.94 E-value=3.3e-26 Score=146.02 Aligned_cols=115 Identities=12% Similarity=0.213 Sum_probs=104.8
Q ss_pred CCCCCCCCceEE--ecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC------C
Q 044272 4 LTIGDSVPNLQV--QTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD------D 74 (133)
Q Consensus 4 l~~G~~~p~f~l--~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d------~ 74 (133)
|.+|+++|+|++ .+.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++.++ +++++|+.| +
T Consensus 1 l~~g~~~P~f~~~~~~~~g~~~~~~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~ 77 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWLNGEVTREQLI-GEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLD 77 (148)
T ss_dssp CCTTCBCCCCCCCSEEESCCCCHHHHT-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSS
T ss_pred CCCCCCCCCCccccccccCcccchhhc-CCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccC
Confidence 468999999999 67899 8999998 7888888887 899999999999999999999876 999999986 6
Q ss_pred HHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 75 VKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+.+++|+++++.+++++.|.+..+.+.|++ ..+|+++++|++|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 124 (148)
T 2b5x_A 78 PGKIKETAAEHDITQPIFVDSDHALTDAFEN------------EYVPAYYVFDKTGQLR 124 (148)
T ss_dssp HHHHHHHHHHTTCCSCEEECSSCHHHHHTCC------------CCSSEEEEECTTCBEE
T ss_pred HHHHHHHHHHcCCCcceEECCchhHHHHhCC------------CCCCEEEEECCCCcEE
Confidence 8999999999999999999999999999999 4699999999999874
No 79
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.94 E-value=1.6e-26 Score=148.95 Aligned_cols=113 Identities=17% Similarity=0.298 Sum_probs=104.2
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC---CCHHHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC---DDVKSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~---d~~~~~ 78 (133)
.+.+|+++|+|++++.+| +++++++ + ++++|+|| ++||+.|+.+++.|.++++++ ++++++|+. |+.+.+
T Consensus 4 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~ 77 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPKGQPVTPATV-S-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVV 77 (154)
T ss_dssp CCCSBEECCCCCEECTTSCEECTTTS-C-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHH
T ss_pred cCCCCCcCCceEEECCCCCEechHHc-C-CeEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHH
Confidence 589999999999999999 8999999 6 88888887 899999999999999999998 799999999 789999
Q ss_pred HHHHHhcCCCCceeeC---CcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDIEAYTPIIAD---PNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++|+++++.+++++.| ....+.+.|++ ..+|++||||++|+|+
T Consensus 78 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 123 (154)
T 3ia1_A 78 LEYMKTYPRFIPLLASDRDRPHEVAARFKV------------LGQPWTFVVDREGKVV 123 (154)
T ss_dssp HHHHTTCTTEEECBCCSSCCHHHHHTTSSB------------CSSCEEEEECTTSEEE
T ss_pred HHHHHHcCCCcccccccccchHHHHHHhCC------------CcccEEEEECCCCCEE
Confidence 9999999999999998 77899999999 4699999999999874
No 80
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.94 E-value=4e-26 Score=149.17 Aligned_cols=118 Identities=16% Similarity=0.269 Sum_probs=94.5
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC--------C
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD--------D 74 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d--------~ 74 (133)
+.+|+.+|+|++++.+| +++++++ +||+++|+|| ++||+.|+.+++.|++++++++++++++++||.| +
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~-~gk~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~ 83 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIF-KGKVLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGT 83 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred CCCCccccceEEEcCCCCEecHHHh-CCCEEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCC
Confidence 57899999999999999 8999999 8898888877 7899999999999999999999889999999984 6
Q ss_pred HHHHHHHHH-hcCCCCcee--eCCcHHH----HH-----HcCCCCCCCCCCCCCCccce---eEEEECCCCccC
Q 044272 75 VKSHNEWIK-DIEAYTPII--ADPNREI----IK-----QLNMVDPDEKDSSGKQLPSR---ALHIVGPDHQVQ 133 (133)
Q Consensus 75 ~~~~~~~~~-~~~~~~~~~--~d~~~~~----~~-----~~~~~~~~~~~~~~~~~~~p---~~~lid~~G~i~ 133 (133)
.+.+++|++ +++.+++++ .|.++.. .+ .+|+.. ..+| ++||||++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~----------~~~p~~~~~~lid~~G~i~ 147 (170)
T 2p5q_A 84 NDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFG----------DDIQWNFAKFLVNKDGQVV 147 (170)
T ss_dssp HHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTC----------SCCCSTTCEEEECTTSCEE
T ss_pred HHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccC----------CcccccccEEEECCCCCEE
Confidence 888999999 788888888 5655433 21 124411 1344 999999999984
No 81
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.93 E-value=1.4e-25 Score=145.85 Aligned_cols=123 Identities=17% Similarity=0.256 Sum_probs=98.6
Q ss_pred CCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCch-hHHHHHHHHhhhhHHHH----cCceEEEEeCCC----HHHH
Q 044272 9 SVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPV-CTTELGKMAAYVPEFDK----REVKLLGLSCDD----VKSH 78 (133)
Q Consensus 9 ~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~-C~~~~~~l~~~~~~~~~----~~v~vv~is~d~----~~~~ 78 (133)
.+|+|++++.+| +++++++ +|++++|+|| ++||+. |+.+++.|+++++++++ .++++++||.|+ ++.+
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~ 79 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDY-LGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAI 79 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGG-TTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHH
T ss_pred CCCCeEEEeCCCCEEeHHHc-CCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHH
Confidence 579999999999 8999999 7888888877 789996 99999999999999987 489999999874 7899
Q ss_pred HHHHHhcCCCCceee---CCcHHHHHHcCCCCCCCCC-CCC--CCccceeEEEECCCCccC
Q 044272 79 NEWIKDIEAYTPIIA---DPNREIIKQLNMVDPDEKD-SSG--KQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~-~~~--~~~~~p~~~lid~~G~i~ 133 (133)
++|+++++.+++++. |....+.+.||+....... ..+ ...|.+++||||++|+|+
T Consensus 80 ~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~ 140 (164)
T 2ggt_A 80 ANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFL 140 (164)
T ss_dssp HHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEE
T ss_pred HHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEE
Confidence 999999999888884 4456788999985311000 000 012455999999999984
No 82
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.93 E-value=2.4e-26 Score=149.90 Aligned_cols=113 Identities=12% Similarity=0.259 Sum_probs=103.8
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC---------
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD--------- 73 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d--------- 73 (133)
+.+|+++|+|++.+.+| +++++++ +|++++|.|| ++||+.|+.+++.|.+++++++ ++++++|+.|
T Consensus 11 ~~~g~~~p~~~l~~~~g~~~~l~~~-~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~ 86 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGEVISLNNV-GGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALG 86 (165)
T ss_dssp HHHHHHHHCCCEEBTTSCEECGGGC-CSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHT
T ss_pred ccccCcCCCCEeecCCCCEeeHHHh-CCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccc
Confidence 35688999999999999 8999999 8888888887 9999999999999999999988 8999999986
Q ss_pred ----------CHHHHHHHHHhcCC-CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 ----------DVKSHNEWIKDIEA-YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ----------~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+.+++|+++++. +++++.| +..+.+.|++ ..+|++||||++|+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v------------~~~P~~~lid~~G~i~ 144 (165)
T 3ha9_A 87 LNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNV------------RSIDYIVIMDKSSNVL 144 (165)
T ss_dssp CCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTC------------CSSSEEEEEETTCCEE
T ss_pred cccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCC------------CCceEEEEEcCCCcEE
Confidence 78999999999999 8899999 8999999999 4689999999999984
No 83
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.93 E-value=6.1e-27 Score=156.13 Aligned_cols=120 Identities=11% Similarity=0.179 Sum_probs=96.3
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC--------
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-------- 73 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-------- 73 (133)
.+..+.++|+|+++|.+| +++|+++ +||++||+|| ++||+.|+.+++.|++++++++++|++||+|+.|
T Consensus 19 ~~~~~~~~p~f~l~d~~G~~~~l~~~-~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~ 96 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDADHKPYNLVQH-KGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPG 96 (187)
T ss_dssp -CTTCCSGGGSCCBBTTSCBCCGGGG-TTSCEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSS
T ss_pred hhcCCCccCCeEEEcCCCCEeeHHHh-CCCEEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCC
Confidence 367899999999999999 8999999 8888888877 9999999999999999999999999999999975
Q ss_pred CHHHHHHHHH-hcCCCCceee--CCcHHHH-HHc--------CCCCCCCCCCCCCCccce---eEEEECCCCccC
Q 044272 74 DVKSHNEWIK-DIEAYTPIIA--DPNREII-KQL--------NMVDPDEKDSSGKQLPSR---ALHIVGPDHQVQ 133 (133)
Q Consensus 74 ~~~~~~~~~~-~~~~~~~~~~--d~~~~~~-~~~--------~~~~~~~~~~~~~~~~~p---~~~lid~~G~i~ 133 (133)
+.+.+++|++ +++.+++++. |.++... ..| ++... ..+| ++||||++|+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~---------~~iP~~~~~~liD~~G~i~ 162 (187)
T 3dwv_A 97 NEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILAT---------KAIKWNFTSFLIDRDGVPV 162 (187)
T ss_dssp BTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSS---------SSCCSTTCEEEECTTSCEE
T ss_pred CHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCC---------CccccceeEEEECCCCCEE
Confidence 5788888988 4588888886 4443221 111 32210 2466 999999999984
No 84
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.93 E-value=2.2e-25 Score=151.15 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=78.6
Q ss_pred CCCCCCCceEEecCC-C-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC--------C
Q 044272 5 TIGDSVPNLQVQTNQ-G-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD--------D 74 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~-G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d--------~ 74 (133)
..++.+|+|++++.+ | +++|+++ +|+++||+|| ++|||.|+.++|.|++++++++++|++||+|+.| +
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~-~Gk~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~ 98 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSL-RGKVLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAK 98 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGG-TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSC
T ss_pred hhcCccCceEeeeCCCCCCccHHHc-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCC
Confidence 568899999999999 9 8999999 8888877777 8999999999999999999999889999999975 5
Q ss_pred HHHHHHHHH------hcCCCCceeeC
Q 044272 75 VKSHNEWIK------DIEAYTPIIAD 94 (133)
Q Consensus 75 ~~~~~~~~~------~~~~~~~~~~d 94 (133)
++.+++|++ +++.++|++.|
T Consensus 99 ~~~i~~f~~~~~~~~~~~~~fp~l~d 124 (208)
T 2f8a_A 99 NEEILNSLKYVRPGGGFEPNFMLFEK 124 (208)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred HHHHHHHHHhcccccccccceEEEEE
Confidence 788999998 88888888864
No 85
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.93 E-value=6.4e-26 Score=150.22 Aligned_cols=117 Identities=14% Similarity=0.197 Sum_probs=93.3
Q ss_pred CCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--------CCH
Q 044272 5 TIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC--------DDV 75 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~--------d~~ 75 (133)
.+|..+|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|++++++++++|++|++||. |+.
T Consensus 13 ~~~~~~p~f~l~d~~G~~v~l~~~-~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~ 90 (180)
T 3kij_A 13 PKINSFYAFEVKDAKGRTVSLEKY-KGKVSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPS 90 (180)
T ss_dssp CCCCCGGGCEEEBTTSCEEEGGGG-TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCH
T ss_pred CCcCcccceEEecCCCCEecHHHc-CCCEEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCH
Confidence 6799999999999999 8999999 8887777665 899999999999999999999998999999995 478
Q ss_pred HHHHHHHHh-cCCCCceeeCC-----cH-HHHHHcCCCCCCCCCCCCCCcccee----EEEECCCCccC
Q 044272 76 KSHNEWIKD-IEAYTPIIADP-----NR-EIIKQLNMVDPDEKDSSGKQLPSRA----LHIVGPDHQVQ 133 (133)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~d~-----~~-~~~~~~~~~~~~~~~~~~~~~~~p~----~~lid~~G~i~ 133 (133)
+.+++|+++ ++..++++.+. .. .+...+.... ...|. +||||++|+|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~----------~~~p~~~~~~~lid~~G~i~ 149 (180)
T 3kij_A 91 KEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSS----------KKEPRWNFWKYLVNPEGQVV 149 (180)
T ss_dssp HHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHH----------TCCCSSTTCEEEECTTSCEE
T ss_pred HHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcC----------CCCccccceEEEECCCCCEE
Confidence 999999999 99999886531 11 1111111000 02455 99999999984
No 86
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.93 E-value=2.4e-25 Score=149.89 Aligned_cols=128 Identities=15% Similarity=0.231 Sum_probs=99.6
Q ss_pred CCCCCCC--CceEEecCCC-eeecccccCCCeEEEEEeeCCCCch-hHHHHHHHHhhhhHHHHc---CceEEEEeCC---
Q 044272 4 LTIGDSV--PNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPV-CTTELGKMAAYVPEFDKR---EVKLLGLSCD--- 73 (133)
Q Consensus 4 l~~G~~~--p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~-C~~~~~~l~~~~~~~~~~---~v~vv~is~d--- 73 (133)
..+|+++ |+|++++.+| +++++++ +|+++||+|| ++||+. |+.+++.|+++++++.++ ++++++||.|
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~~v~l~~~-~Gk~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~ 90 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGNEFTEKNL-LGKFSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR 90 (200)
T ss_dssp ---CCCCCCCCCEEEETTSCEEEGGGG-TTSCEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT
T ss_pred hccCCCCcCCCEEEEcCCCCEEeHHHc-CCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC
Confidence 4678886 9999999999 8999999 7888888877 889996 999999999999999864 7999999987
Q ss_pred -CHHHHHHHHHhcCCCCceeeC---CcHHHHHHcCCCCCCC----CCCCCCCccceeEEEECCCCccC
Q 044272 74 -DVKSHNEWIKDIEAYTPIIAD---PNREIIKQLNMVDPDE----KDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++.+++|+++++.+++.+.+ ....+.+.||+..... .+......|.|++||||++|+|+
T Consensus 91 d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~ 158 (200)
T 2b7k_A 91 DSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFV 158 (200)
T ss_dssp CCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEE
T ss_pred CCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEE
Confidence 689999999999988876664 3467889999962110 00011123788999999999984
No 87
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2.1e-25 Score=161.56 Aligned_cols=117 Identities=12% Similarity=0.136 Sum_probs=107.9
Q ss_pred CCCCCCCCCceE-----EecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC---
Q 044272 3 GLTIGDSVPNLQ-----VQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD--- 73 (133)
Q Consensus 3 ~l~~G~~~p~f~-----l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d--- 73 (133)
.+.+|+++|+|+ +.+.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++++++++|++|+.|
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsLsdl-~GK~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~ 127 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDLKSL-RGKVVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA 127 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcHHHh-CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc
Confidence 478999999999 899999 8999999 7888888887 8999999999999999999999889999999974
Q ss_pred ---CHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 ---DVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 ---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++.+++|+++++.+++++.|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 128 ~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV------------~~~Pt~~lID~~G~Iv 178 (352)
T 2hyx_A 128 FEKVPGNVAKGAANLGISYPIALDNNYATWTNYRN------------RYWPAEYLIDATGTVR 178 (352)
T ss_dssp GGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTC------------CEESEEEEECTTSBEE
T ss_pred ccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCC------------CccCEEEEEeCCCeEE
Confidence 68999999999999999999999999999999 4789999999999984
No 88
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.93 E-value=2.1e-25 Score=143.55 Aligned_cols=112 Identities=13% Similarity=0.186 Sum_probs=93.8
Q ss_pred CCceEEec-CCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 10 VPNLQVQT-NQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 10 ~p~f~l~~-~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
+|++.++. .+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++++.++++++|+.|+.+.+.+|+++++.
T Consensus 3 ~pa~~~~~~~~G~~~~l~~~-~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 3 LSADELAGWKDNTPQSLQSL-KAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp ----CEEETTTCCEECGGGC-CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred CCcchhhcccCCCEecHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCC
Confidence 45555554 688 8999999 8888888877 999999999999999999999888999999999999999999999999
Q ss_pred CCceeeCC---cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 88 YTPIIADP---NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 88 ~~~~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++.|. ...+.+.||... ..+|++||||++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~v----------~~~P~~~lid~~G~i~ 119 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNTV----------GVLPFTVVEAPKCGYR 119 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCCS----------CCSSEEEEEETTTTEE
T ss_pred CCceEecCccchHHHHHHhCCcc----------CCCCEEEEECCCCcEE
Confidence 99888865 357888898311 4699999999999874
No 89
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.93 E-value=5.9e-25 Score=138.22 Aligned_cols=112 Identities=15% Similarity=0.260 Sum_probs=102.3
Q ss_pred CCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHHHHH
Q 044272 6 IGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNEWIK 83 (133)
Q Consensus 6 ~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~~~~ 83 (133)
+|.++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++ ++++++|+.| +.+..++|.+
T Consensus 1 ~~~~~p~~~~~~~~g~~~~l~~~-~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~ 76 (136)
T 1zzo_A 1 TVPAQLQFSAKTLDGHDFHGESL-LGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVN 76 (136)
T ss_dssp CCCGGGCCEEEBTTSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCCCCCcccccCCCCEeeHHHh-CCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHH
Confidence 478899999999999 8999999 7888888887 8999999999999999998887 7999999986 5889999999
Q ss_pred hcCC-CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 84 DIEA-YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 84 ~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++. +++++.|.+..+.+.|++ ..+|+++++|++|+|+
T Consensus 77 ~~~~~~~~~~~d~~~~~~~~~~i------------~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 77 KYPVKTFTQLADTDGSVWANFGV------------TQQPAYAFVDPHGNVD 115 (136)
T ss_dssp HTTCTTSEEEECTTCHHHHHTTC------------CSSSEEEEECTTCCEE
T ss_pred HcCCCceEEEEcCCcHHHHHcCC------------CCCceEEEECCCCCEE
Confidence 9999 889999999999999999 4699999999999973
No 90
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.93 E-value=2e-25 Score=142.57 Aligned_cols=114 Identities=8% Similarity=0.153 Sum_probs=99.0
Q ss_pred CCCCCCc-eEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH-cCceEEEEeCC-CHHHHHHH
Q 044272 6 IGDSVPN-LQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK-REVKLLGLSCD-DVKSHNEW 81 (133)
Q Consensus 6 ~G~~~p~-f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~-~~v~vv~is~d-~~~~~~~~ 81 (133)
.|+.+|+ |++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++++ .++++++|+.| +.+..++|
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSL-AGKTVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDY 80 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 5899999 99999999 8999999 7888888777 78999999999999999999985 68999999998 68889999
Q ss_pred HHhcCCC-Cceee-CCcHHHHHHcCCCCCCCCCCCCCCccceeEEEEC-CCCccC
Q 044272 82 IKDIEAY-TPIIA-DPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVG-PDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~-~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid-~~G~i~ 133 (133)
.++++.. +++.. |....+.+.|++ ..+|+++||| ++|+|+
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 81 YAKMPWLALPFEDRKGMEFLTTGFDV------------KSIPTLVGVEADSGNII 123 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHTTC------------CSSSEEEEEETTTCCEE
T ss_pred HHhCCccccccCchHHHHHHHHHcCC------------CCCCEEEEEECCCCcEE
Confidence 9998753 35554 556789999999 4699999999 999974
No 91
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.4e-26 Score=150.29 Aligned_cols=113 Identities=12% Similarity=0.197 Sum_probs=83.2
Q ss_pred CCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--------CCHH
Q 044272 6 IGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC--------DDVK 76 (133)
Q Consensus 6 ~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~--------d~~~ 76 (133)
-|..+|+|+++|.+| +++|+++ +|++++|+|| ++||+.|+ +++.|++++++++++++++++||. |+.+
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~-~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~ 84 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQL-KGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE 84 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGG-TTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC--------
T ss_pred chhheeeeEEEcCCCCEecHHHc-CCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH
Confidence 367899999999999 8999999 8898888887 89999999 999999999999988999999997 4677
Q ss_pred HHHHHH-HhcCCCCceeeCCc--HH-HH--------HHcCCCCCCCCCCCCCCccce------eEEEECCCCccC
Q 044272 77 SHNEWI-KDIEAYTPIIADPN--RE-II--------KQLNMVDPDEKDSSGKQLPSR------ALHIVGPDHQVQ 133 (133)
Q Consensus 77 ~~~~~~-~~~~~~~~~~~d~~--~~-~~--------~~~~~~~~~~~~~~~~~~~~p------~~~lid~~G~i~ 133 (133)
.+++|+ ++++.+++++.|.+ +. .. +.|++ ...| ++||||++|+|+
T Consensus 85 ~~~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v------------~~~P~i~~~~~~~lid~~G~i~ 147 (171)
T 3cmi_A 85 EIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGM------------LGLRGIKWNFEKFLVDKKGKVY 147 (171)
T ss_dssp ----------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCS------------SSCCSCCSTTCEEEECSSSCEE
T ss_pred HHHHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCc------------CCCCcccccceEEEECCCCCEE
Confidence 889999 99999999998643 21 11 23555 2466 999999999984
No 92
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=142.44 Aligned_cols=121 Identities=16% Similarity=0.267 Sum_probs=99.2
Q ss_pred CceEEecCCC-eeecccccCCCeEEEEEeeCCCCch-hHHHHHHHHhhhhHHHH----cCceEEEEeCC----CHHHHHH
Q 044272 11 PNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPV-CTTELGKMAAYVPEFDK----REVKLLGLSCD----DVKSHNE 80 (133)
Q Consensus 11 p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~-C~~~~~~l~~~~~~~~~----~~v~vv~is~d----~~~~~~~ 80 (133)
|+|++++.+| +++++++ +|++++|+|| ++||+. |+.+++.|+++++++++ .++++++||.| +++.+++
T Consensus 7 p~f~l~~~~G~~~~l~~~-~gk~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADF-RGQWVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTT-TTSEEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHh-CCCEEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 8999999999 8999999 7888877776 889997 99999999999999986 58999999986 5889999
Q ss_pred HHHhcCCCCceeeCCc---HHHHHHcCCCCCCCCC-C-CC-CCccceeEEEECCCCccC
Q 044272 81 WIKDIEAYTPIIADPN---REIIKQLNMVDPDEKD-S-SG-KQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 81 ~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~-~-~~-~~~~~p~~~lid~~G~i~ 133 (133)
|+++++.+++++.+.. ..+.+.||+....... . .+ ...+.|++||||++|+|+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~ 143 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFT 143 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEE
T ss_pred HHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEE
Confidence 9999999998888744 4788999986322110 0 01 123778999999999984
No 93
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.93 E-value=9.7e-25 Score=142.60 Aligned_cols=115 Identities=12% Similarity=0.301 Sum_probs=100.4
Q ss_pred CCCCCCCCCCceEEecC--CC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHH
Q 044272 2 PGLTIGDSVPNLQVQTN--QG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKS 77 (133)
Q Consensus 2 ~~l~~G~~~p~f~l~~~--~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~ 77 (133)
..+.+|+++|+|++++. +| +++++++.+|++++|+|| ++||++|+.+++.|.+++++ ++++++|+.| +.+.
T Consensus 20 ~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~ 94 (168)
T 2b1k_A 20 ESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQK 94 (168)
T ss_dssp CCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHH
T ss_pred cccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHH
Confidence 34689999999999999 88 788888657888888887 89999999999999987654 7999999964 6888
Q ss_pred HHHHHHhcCCCCc-eeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 78 HNEWIKDIEAYTP-IIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 78 ~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
..+|+++++.+++ ++.|.+..+.+.|++ ..+|++|+||++|+|+
T Consensus 95 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 139 (168)
T 2b1k_A 95 AISWLKELGNPYALSLFDGDGMLGLDLGV------------YGAPETFLIDGNGIIR 139 (168)
T ss_dssp HHHHHHHHCCCCSEEEEETTCHHHHHHTC------------CSSSEEEEECTTSBEE
T ss_pred HHHHHHHcCCCCceeeECcchHHHHHcCc------------cccCEEEEECCCCeEE
Confidence 9999999999886 678888999999999 4689999999999974
No 94
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.93 E-value=7.3e-25 Score=138.06 Aligned_cols=110 Identities=14% Similarity=0.207 Sum_probs=101.1
Q ss_pred CCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhc
Q 044272 8 DSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDI 85 (133)
Q Consensus 8 ~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~ 85 (133)
.++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++. ++++++|+.|+ .+..++|++++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~-~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASL-QGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHh-CCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHc
Confidence 4689999999999 8999999 7888888888 8999999999999999999887 89999999975 89999999999
Q ss_pred CCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 86 EAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 86 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+++++.|.+..+.+.|++ ..+|+++++|++|+|+
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i------------~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNV------------PWQPAFVFYRADGTST 113 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTC------------CSSSEEEEECTTSCEE
T ss_pred CCCceEEECCchhHHHhcCC------------CCCCEEEEECCCCcEE
Confidence 99999999999999999999 4689999999999973
No 95
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=1.9e-27 Score=154.28 Aligned_cols=119 Identities=14% Similarity=0.287 Sum_probs=105.6
Q ss_pred CCCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHh-hhhHHH-HcCceEEEEeCCCH-HHH
Q 044272 3 GLTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAA-YVPEFD-KREVKLLGLSCDDV-KSH 78 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~-~~~~~~-~~~v~vv~is~d~~-~~~ 78 (133)
.+.+|+++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+ ++++++ +.++++++|+.|+. +..
T Consensus 6 ~l~~g~~~p~f~l~~~~g~~~~l~~~-~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~ 83 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLTDGKQVTLSSL-RGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKV 83 (159)
Confidence 368999999999999999 8999999 7888888877 8999999999999998 888888 67899999999854 568
Q ss_pred HHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
++|.++++.+++++.|.+..+.+.|++.. ..+|++||||++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----------~~~P~~~lid~~G~i~ 128 (159)
T 2ls5_A 84 LAFAKSTGVTYPLGLDPGADIFAKYALRD----------AGITRNVLIDREGKIV 128 (159)
Confidence 89999999999999999999999999732 2589999999999985
No 96
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=148.29 Aligned_cols=88 Identities=9% Similarity=0.169 Sum_probs=78.2
Q ss_pred CCCCCCCceEEecCC-C-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--------CC
Q 044272 5 TIGDSVPNLQVQTNQ-G-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC--------DD 74 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~-G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~--------d~ 74 (133)
..+..+|+|++++.+ | +++|+++ +||++||+|| ++||+.|+ +++.|++++++|+++|++||+||. ++
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~-~GKvvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~ 106 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQY-VGKHILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGD 106 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGG-TTSEEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred cccCCcCCcEeeeCCCCCEEcHHHh-CCCEEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCC
Confidence 456789999999999 9 8999999 8888777776 99999999 999999999999999999999995 35
Q ss_pred HHHHHHHHH------hcCCCCceeeCC
Q 044272 75 VKSHNEWIK------DIEAYTPIIADP 95 (133)
Q Consensus 75 ~~~~~~~~~------~~~~~~~~~~d~ 95 (133)
.+.+++|++ +++.++|++.|.
T Consensus 107 ~~~i~~f~~~~~~~~~~~~~fpll~d~ 133 (215)
T 2i3y_A 107 NKEILPGLKYVRPGGGFVPSFQLFEKG 133 (215)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred HHHHHHHHHhccchhccCccceeEeee
Confidence 788999999 899999998753
No 97
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.92 E-value=1.7e-24 Score=136.07 Aligned_cols=110 Identities=12% Similarity=0.326 Sum_probs=98.3
Q ss_pred CCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEE------eCCCHHHHHHH
Q 044272 9 SVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGL------SCDDVKSHNEW 81 (133)
Q Consensus 9 ~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~i------s~d~~~~~~~~ 81 (133)
++|+|++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.++++++. .++.+++| +.++.+...+|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~~~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDY-KGKKVYLKFW-ASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPGHKGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGG-TTSEEEEEEC-CTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTTSTTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCCCCchhhHHHHHHH
Confidence 589999999999 8999999 8888888877 8999999999999999988843 46999999 45678999999
Q ss_pred HHhcCC-CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEA-YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.++++. .++++.|.+..+.+.|++ ..+|+++++|++|+|+
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 118 (138)
T 4evm_A 78 YKGLDYKNLPVLVDPSGKLLETYGV------------RSYPTQAFIDKEGKLV 118 (138)
T ss_dssp HTTCCCTTCCEEECTTCHHHHHTTC------------CSSSEEEEECTTCCEE
T ss_pred HhhcCCCCeeEEECcchHHHHHcCc------------ccCCeEEEECCCCcEE
Confidence 999998 779999999999999999 4689999999999974
No 98
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.92 E-value=4.2e-25 Score=144.51 Aligned_cols=125 Identities=14% Similarity=0.178 Sum_probs=103.6
Q ss_pred CCCCCCCceEEecCCCeeecccccCCCeEEEEEeeCCCCch-hHHHHHHHHhhhhHHHHc---CceEEEEeCC----CHH
Q 044272 5 TIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPV-CTTELGKMAAYVPEFDKR---EVKLLGLSCD----DVK 76 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~G~~~l~d~~~~~~~vl~f~~~~~c~~-C~~~~~~l~~~~~~~~~~---~v~vv~is~d----~~~ 76 (133)
.+|+++|+|++++.+|+++++++ +|++++|+|| ++||+. |+.+++.|++++++++++ ++++++||.| +++
T Consensus 11 ~~G~~~p~f~l~~~~g~~~l~~~-~gk~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~ 88 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQGPVRLSQF-QDKVVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPE 88 (172)
T ss_dssp EEEEEECCCEEECSSSEEEGGGS-TTSEEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHH
T ss_pred ccCCCCCCeEEEcCCCCCcHHHh-CCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHH
Confidence 36889999999999888899999 8888888777 889995 999999999999999875 7999999965 678
Q ss_pred HHHHHHHhcCCCCceeeCCc---HHHHHHcCCCCCCCCC----CCCCCccceeEEEECCCCccC
Q 044272 77 SHNEWIKDIEAYTPIIADPN---REIIKQLNMVDPDEKD----SSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 77 ~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~----~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+++|+++++.+++++.|.. ..+.+.||+....... .++ ..+.|++|||| +|+|+
T Consensus 89 ~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~-i~~~P~~~lid-~G~i~ 150 (172)
T 2k6v_A 89 VADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYL-VDHTATTFVVK-EGRLV 150 (172)
T ss_dssp HHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEE-EEECCCEEEEE-TTEEE
T ss_pred HHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCce-EecCCEEEEEE-CCEEE
Confidence 99999999999999999987 6888999985322110 001 13789999999 99984
No 99
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.92 E-value=2e-24 Score=146.35 Aligned_cols=88 Identities=9% Similarity=0.184 Sum_probs=76.0
Q ss_pred CCCCCCCceEEecCC-C-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--------CC
Q 044272 5 TIGDSVPNLQVQTNQ-G-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC--------DD 74 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~-G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~--------d~ 74 (133)
.....+|+|++++.+ | +++|+++ +||++||+|| ++||+.| .+++.|++++++|+++|++||+||. ++
T Consensus 12 ~~~~~~pdF~l~d~~~G~~v~Ls~~-kGKvvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~ 88 (207)
T 2r37_A 12 GISGTIYEYGALTIDGEEYIPFKQY-AGKYVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGE 88 (207)
T ss_dssp ---CCGGGCEEEBTTSSCEEEGGGG-TTSEEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSC
T ss_pred cccCccCCeEeeeCCCCCEEcHHHh-CCCEEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCC
Confidence 345689999999999 9 8999999 8888777776 9999999 7999999999999999999999995 35
Q ss_pred HHHHHHHHH------hcCCCCceeeCC
Q 044272 75 VKSHNEWIK------DIEAYTPIIADP 95 (133)
Q Consensus 75 ~~~~~~~~~------~~~~~~~~~~d~ 95 (133)
.+.+++|++ +++.++|++.|.
T Consensus 89 ~~~i~~f~~~~~~~~~~~~~fp~l~d~ 115 (207)
T 2r37_A 89 NSEILPTLKYVRPGGGFVPNFQLFEKG 115 (207)
T ss_dssp HHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred HHHHHHHHHhcchhhccCccceeeeEe
Confidence 788999999 899999998753
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.92 E-value=8.1e-25 Score=140.07 Aligned_cols=115 Identities=10% Similarity=0.243 Sum_probs=99.1
Q ss_pred CCCCCCCc-eEEecCCCeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH-cCceEEEEeCC-CHHHHHHH
Q 044272 5 TIGDSVPN-LQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK-REVKLLGLSCD-DVKSHNEW 81 (133)
Q Consensus 5 ~~G~~~p~-f~l~~~~G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~-~~v~vv~is~d-~~~~~~~~ 81 (133)
..|+.+|+ |++++.+|.++++++ +|++++|+|| ++||+.|+.+++.|.++++++++ .++++++|+.| +.+..++|
T Consensus 3 ~~~~~~P~~f~l~~~~g~~~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 80 (146)
T 1o8x_A 3 GLDKYLPGIEKLRRGDGEVEVKSL-AGKLVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGY 80 (146)
T ss_dssp CGGGTSTTCCEEEETTEEEEGGGG-TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHH
T ss_pred chHhhCCCceEEEcCCCCCcHHHh-CCCEEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHH
Confidence 57899999 999999888899999 7888888877 79999999999999999999984 68999999998 57888999
Q ss_pred HHhcCCC-Cceee-CCcHHHHHHcCCCCCCCCCCCCCCccceeEEEEC-CCCccC
Q 044272 82 IKDIEAY-TPIIA-DPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVG-PDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~-~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid-~~G~i~ 133 (133)
.++++.. +++.. |.+..+.+.|++ ..+|+++|+| ++|+|+
T Consensus 81 ~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 81 FAKMPWLAVPFAQSEAVQKLSKHFNV------------ESIPTLIGVDADSGDVV 123 (146)
T ss_dssp HTTCSSEECCGGGHHHHHHHHHHTTC------------CSSSEEEEEETTTCCEE
T ss_pred HHHCCceeeccchhhHHHHHHHHhCC------------CCCCEEEEEECCCCeEE
Confidence 9998753 35554 566789999999 4699999999 999974
No 101
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.91 E-value=1.6e-24 Score=138.16 Aligned_cols=115 Identities=10% Similarity=0.226 Sum_probs=97.7
Q ss_pred CCCCCCCce-EEecCCCeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHH-HcCceEEEEeCC-CHHHHHHH
Q 044272 5 TIGDSVPNL-QVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFD-KREVKLLGLSCD-DVKSHNEW 81 (133)
Q Consensus 5 ~~G~~~p~f-~l~~~~G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~-~~~v~vv~is~d-~~~~~~~~ 81 (133)
.+|+.+|+| ++++.+|+++++++ +|++++|+|| ++||+.|+.+++.|.+++++++ +.++++++|+.| +.+..++|
T Consensus 3 ~~g~~~p~~~~l~~~~g~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~ 80 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSGEVSLGSL-VGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDY 80 (144)
T ss_dssp GGGGTSCTTCCBBCTTSCBCSGGG-TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHH
T ss_pred chhhhCccceEeecCCCcCcHHHh-CCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHH
Confidence 579999997 99999998899999 7888888877 8999999999999999999998 468999999998 46788889
Q ss_pred HHhcCCCC-ceee-CCcHHHHHHcCCCCCCCCCCCCCCccceeEEEEC-CCCccC
Q 044272 82 IKDIEAYT-PIIA-DPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVG-PDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~-~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid-~~G~i~ 133 (133)
.++++... ++.. |....+.+.|++ ..+|+++++| ++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v------------~~~Pt~~lid~~~G~i~ 123 (144)
T 1o73_A 81 YGKMPWLALPFDQRSTVSELGKTFGV------------ESIPTLITINADTGAII 123 (144)
T ss_dssp HTTCSSEECCTTCHHHHHHHHHHHTC------------CSSSEEEEEETTTCCEE
T ss_pred HHhCCceEeeccchhHHHHHHHHcCC------------CCCCEEEEEECCCCeEE
Confidence 88876433 4443 456789999999 4699999999 899974
No 102
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.91 E-value=3e-25 Score=145.33 Aligned_cols=116 Identities=8% Similarity=0.193 Sum_probs=98.7
Q ss_pred CCCCCCCCce-EEecCCCeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH-cCceEEEEeCCC-HHHHHH
Q 044272 4 LTIGDSVPNL-QVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK-REVKLLGLSCDD-VKSHNE 80 (133)
Q Consensus 4 l~~G~~~p~f-~l~~~~G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~-~~v~vv~is~d~-~~~~~~ 80 (133)
..+|+++|+| ++++.+|+++|+++ +|+++||+|| ++||+.|+.+++.|.++++++++ .+++|++|+.|. .+..++
T Consensus 22 ~~vG~~~P~f~~l~~~~g~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~ 99 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQADTADMDSL-SGKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNA 99 (165)
T ss_dssp CHHHHHHHHTSCEEETTEEECSGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHH
T ss_pred hhhcccCCcceeeecCCCcccHHHc-CCCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHH
Confidence 3578899999 99999999999999 7888888877 99999999999999999999986 689999999974 678888
Q ss_pred HHHhcCCCC-ceeeCCc-HHHHHHcCCCCCCCCCCCCCCccceeEEEECCC-CccC
Q 044272 81 WIKDIEAYT-PIIADPN-REIIKQLNMVDPDEKDSSGKQLPSRALHIVGPD-HQVQ 133 (133)
Q Consensus 81 ~~~~~~~~~-~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~-G~i~ 133 (133)
|.++++... ++..+.. ..+.+.|++ ..+|++||||++ |+|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~~~v------------~~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 100 YYAKMPWLSIPFANRNIVEALTKKYSV------------ESIPTLIGLNADTGDTV 143 (165)
T ss_dssp HHTTCSSEECCTTCHHHHHHHHHHTTC------------CSSSEEEEEETTTCCEE
T ss_pred HHHhCCCcccccCchhHHHHHHHHcCC------------CCCCEEEEEeCCCCEEE
Confidence 998876533 5444433 789999999 479999999998 9984
No 103
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.91 E-value=1.3e-23 Score=135.31 Aligned_cols=114 Identities=11% Similarity=0.221 Sum_probs=97.2
Q ss_pred CCCCCCCCCceEEecCCC---------eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 3 GLTIGDSVPNLQVQTNQG---------NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 3 ~l~~G~~~p~f~l~~~~G---------~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
.+.+|+++|+|++++.+| +++++++ .|++++|+|| ++||+.|+.+++.|.+++++ .++.+++|+.|
T Consensus 7 ~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~ 81 (156)
T 1kng_A 7 SALIGRPAPQTALPPLEGLQADNVQVPGLDPAAF-KGKVSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQLVGINYK 81 (156)
T ss_dssp -----CBCCCCCBCCCTTCEETTEECCCBCGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES
T ss_pred hHHhCCCCCCceeeeccCcccccccCceechHHh-CCCEEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeEEEEEECC
Confidence 468999999999999986 4899999 7888888877 89999999999999998776 35999999974
Q ss_pred -CHHHHHHHHHhcCCCCc-eeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 74 -DVKSHNEWIKDIEAYTP-IIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 74 -~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+...+|+++++.+++ +..|.+..+.+.|++ ..+|++|+||++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v------------~~~P~~~~id~~G~i~ 131 (156)
T 1kng_A 82 DAADNARRFLGRYGNPFGRVGVDANGRASIEWGV------------YGVPETFVVGREGTIV 131 (156)
T ss_dssp CCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTC------------CSSCEEEEECTTSBEE
T ss_pred CCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCc------------CccCeEEEEcCCCCEE
Confidence 68889999999999997 888999999999999 4699999999999873
No 104
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.90 E-value=7e-24 Score=137.72 Aligned_cols=106 Identities=19% Similarity=0.332 Sum_probs=94.7
Q ss_pred EEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC------CHHHHHHHHHhcC
Q 044272 14 QVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD------DVKSHNEWIKDIE 86 (133)
Q Consensus 14 ~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d------~~~~~~~~~~~~~ 86 (133)
++++.+| +++++++ +|++++|+|| ++||+.|+.+++.|.+++++++..++++|+|+.| +.+.+.+|.+.++
T Consensus 22 ~l~~~~g~~~~~~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYLK-KDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGCC-TTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHHh-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 8889999 8999998 7888888887 9999999999999999999998889999999964 4677888888888
Q ss_pred CC-CceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 87 AY-TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 87 ~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.. +++..|.+..+.+.|++ ..+|++||||++|+|+
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 135 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNI------------SVYPSWALIGKDGDVQ 135 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTC------------CSSSEEEEECTTSCEE
T ss_pred CCcceEEEcCchHHHHHcCC------------CccceEEEECCCCcEE
Confidence 77 58999999999999999 4699999999999874
No 105
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.82 E-value=4.6e-25 Score=140.27 Aligned_cols=112 Identities=13% Similarity=0.206 Sum_probs=95.8
Q ss_pred CCCCceEEecCCC-eeeccc-ccCCC-eEEEEEeeCCCCchhHHHHHHHHhhhhHHHH--cCceEEEEeCC-CHHHHHHH
Q 044272 8 DSVPNLQVQTNQG-NFKLHD-FIGDN-WTIIFSHPGDFTPVCTTELGKMAAYVPEFDK--REVKLLGLSCD-DVKSHNEW 81 (133)
Q Consensus 8 ~~~p~f~l~~~~G-~~~l~d-~~~~~-~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~--~~v~vv~is~d-~~~~~~~~ 81 (133)
+.+|+|++++.+| ++++++ + +|+ +++|+|| ++||+.|+.+++.|.++++++++ .++.+++|+.| +.+...+|
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~-~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~ 79 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEAL-KDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQY 79 (143)
Confidence 4689999999999 899999 7 777 7777776 89999999999999999999953 47999999997 56788899
Q ss_pred HHhcCCCC---ceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYT---PIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+++++.++ ++..|....+.+.|++ ..+|++++||++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~v------------~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 80 MMESHGDWLAIPYRSGPASNVTAKYGI------------TGIPALVIVKKDGTLI 122 (143)
Confidence 99988876 5555666789999998 4699999999999984
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.68 E-value=2.7e-16 Score=104.71 Aligned_cols=126 Identities=19% Similarity=0.348 Sum_probs=99.4
Q ss_pred CCCCCCCCc--eEEec-------CC----C---eeeccccc-CCCeEEEEEeeCCCCchhHH-HHHHHHhhhhHH-HHcC
Q 044272 4 LTIGDSVPN--LQVQT-------NQ----G---NFKLHDFI-GDNWTIIFSHPGDFTPVCTT-ELGKMAAYVPEF-DKRE 64 (133)
Q Consensus 4 l~~G~~~p~--f~l~~-------~~----G---~~~l~d~~-~~~~~vl~f~~~~~c~~C~~-~~~~l~~~~~~~-~~~~ 64 (133)
..+|+++|. +++.- .+ | ++++++.. ++|++||+++++.+.|.|.. ++|.+.+.++++ +.+|
T Consensus 26 ~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kG 105 (199)
T 4h86_A 26 DLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKE 105 (199)
T ss_dssp TTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcC
Confidence 568999994 54431 11 4 38888865 68999999999999999987 699999988876 6788
Q ss_pred c-eEEEEeCCCHHHHHHHHHhcCCC----CceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 65 V-KLLGLSCDDVKSHNEWIKDIEAY----TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 65 v-~vv~is~d~~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+ +|++||.+++..+.+|.+..+.. .++++|.+.++.+.+|+..... .+.....+..+||| ||+|.
T Consensus 106 vd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~---~gg~RS~Rya~IVd-DGvV~ 175 (199)
T 4h86_A 106 VDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG---DGVYWSGRWAMVVE-NGIVT 175 (199)
T ss_dssp CCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE---TTEEEECSEEEEEE-TTEEE
T ss_pred CcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC---CCcceeeEEEEEEE-CCEEE
Confidence 7 59999999999999999988764 3899999999999999864321 12123568899998 99873
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.62 E-value=3e-16 Score=98.98 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=72.4
Q ss_pred CCCCCCCCceE-EecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 4 LTIGDSVPNLQ-VQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 4 l~~G~~~p~f~-l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
...|..+|+|. +.+.++ ...+++. ++++++|+|| ++||+.|+...+.+ .++.+.++ ++.++.|+.+..
T Consensus 4 ~~~~~~~~~f~~~~~~~~~~~~l~~~-~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~--- 76 (134)
T 2fwh_A 4 TAQTQTHLNFTQIKTVDELNQALVEA-KGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAN--- 76 (134)
T ss_dssp ------CCCCEECCSHHHHHHHHHHH-TTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTC---
T ss_pred ccccccCCCcEEecCHHHHHHHHHHh-cCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCC---
Confidence 35688899998 566667 7788887 6788888877 89999999999888 77766665 599999988642
Q ss_pred HHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 79 NEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.|....+.+.|++ ..+|+++++|++|+++
T Consensus 77 --------------~~~~~~l~~~~~v------------~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 77 --------------DAQDVALLKHLNV------------LGLPTILFFDGQGQEH 105 (134)
T ss_dssp --------------CHHHHHHHHHTTC------------CSSSEEEEECTTSCBC
T ss_pred --------------cchHHHHHHHcCC------------CCCCEEEEECCCCCEe
Confidence 1335678888998 4699999999999873
No 108
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.60 E-value=1.9e-15 Score=94.02 Aligned_cols=91 Identities=10% Similarity=0.070 Sum_probs=71.2
Q ss_pred CCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcC
Q 044272 8 DSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIE 86 (133)
Q Consensus 8 ~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~ 86 (133)
+.+++++..+.+| +...... .+++++|.|| ++||+.|+...+.+.++.++++ .++.++.|+.|
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~-~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~------------- 67 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAK-EGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE------------- 67 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCC-SSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT-------------
T ss_pred cccCCCCccccchhHHHHHHh-CCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC-------------
Confidence 4567777777777 4334333 6677777776 9999999999999999988886 56999999965
Q ss_pred CCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 87 AYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 87 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.|.+..+.+.|++ ..+|+++++|++|++
T Consensus 68 ------~d~~~~~~~~~~v------------~~~Pt~~~~~~~G~~ 95 (126)
T 2l57_A 68 ------EEKNIDLAYKYDA------------NIVPTTVFLDKEGNK 95 (126)
T ss_dssp ------SSHHHHHHHHTTC------------CSSSEEEEECTTCCE
T ss_pred ------CCchHHHHHHcCC------------cceeEEEEECCCCCE
Confidence 2344578888998 469999999999986
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.53 E-value=3.4e-15 Score=96.31 Aligned_cols=101 Identities=8% Similarity=0.072 Sum_probs=71.8
Q ss_pred CCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 6 IGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 6 ~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
.+...+++ +..| .+++++. +|++++|+||.++||+.|+.+.+.| .++.+.+. .++.++.|..+...
T Consensus 26 ~~~~~~~~---~~~~~~~~~a~~-~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~----- 95 (154)
T 2ju5_A 26 IAAANLQW---ESYAEALEHSKQ-DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKN----- 95 (154)
T ss_dssp SCCCCCCE---ECHHHHHHHHHH-HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSC-----
T ss_pred cccCCCCC---CCHHHHHHHHHh-CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcccc-----
Confidence 44444555 3335 6888887 6788888887689999999999999 55544333 35888888876432
Q ss_pred HHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 82 IKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
+.+++ +.|.+..+.+.|++ ..+|+++++|++|+++
T Consensus 96 ----~~~~~-~~~~~~~l~~~~~v------------~~~Pt~~~~d~~G~~~ 130 (154)
T 2ju5_A 96 ----HQPEE-QRQKNQELKAQYKV------------TGFPELVFIDAEGKQL 130 (154)
T ss_dssp ----CCCHH-HHHHHHHHHHHTTC------------CSSSEEEEECTTCCEE
T ss_pred ----CCChh-hHhhHHHHHHHcCC------------CCCCEEEEEcCCCCEE
Confidence 12222 24566788999999 4699999999999873
No 110
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.47 E-value=3.2e-13 Score=85.35 Aligned_cols=80 Identities=11% Similarity=0.191 Sum_probs=64.5
Q ss_pred cCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCC
Q 044272 17 TNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADP 95 (133)
Q Consensus 17 ~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~ 95 (133)
+.+| ..+++++ ++++++|.|| ++||++|+...+.+.++.+.+.+ .+.++.|..|.
T Consensus 38 ~~~~~~~~l~~~-~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~--------------------- 93 (141)
T 3hxs_A 38 DYENHSKEWKYL-GDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDK--------------------- 93 (141)
T ss_dssp CCSSCCCCCCCC-CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------
T ss_pred ccccchhHHHHh-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCC---------------------
Confidence 4455 5677776 6788888877 89999999999999999988875 48888888653
Q ss_pred cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 96 NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
+..+.+.|++ ..+|+++++|++|++
T Consensus 94 ~~~~~~~~~v------------~~~Pt~~~~~~~g~~ 118 (141)
T 3hxs_A 94 EPELARDFGI------------QSIPTIWFVPMKGEP 118 (141)
T ss_dssp CHHHHHHTTC------------CSSSEEEEECSSSCC
T ss_pred CHHHHHHcCC------------CCcCEEEEEeCCCCE
Confidence 4467888898 469999999999986
No 111
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.43 E-value=5.5e-13 Score=83.17 Aligned_cols=88 Identities=15% Similarity=0.303 Sum_probs=62.9
Q ss_pred CCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHh
Q 044272 6 IGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKD 84 (133)
Q Consensus 6 ~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~ 84 (133)
....+|+++ +.++ .++.... ++++++|.|| ++||++|+...+.+.++.+++++ ++.++.|..|
T Consensus 20 ~~~~~~~~~--~~~~~~~~~~~~-~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d----------- 83 (128)
T 3ul3_B 20 MFKKVPRLQ--QNGSNIINGVNM-KNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLD----------- 83 (128)
T ss_dssp ------CCC--CCCCSSSSBTTS-CCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGG-----------
T ss_pred HhccCCccc--cCCccHHHHHHc-cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECC-----------
Confidence 345566665 3344 4666665 6777777776 99999999999999999988874 4888888754
Q ss_pred cCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 85 IEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 85 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.+..+.+.|++ ..+|+++++ ++|++
T Consensus 84 ----------~~~~l~~~~~v------------~~~Pt~~~~-~~G~~ 108 (128)
T 3ul3_B 84 ----------KNESLARKFSV------------KSLPTIILL-KNKTM 108 (128)
T ss_dssp ----------GCHHHHHHTTC------------CSSSEEEEE-ETTEE
T ss_pred ----------CCHHHHHHcCC------------CCcCEEEEE-ECCEE
Confidence 23478888998 468999999 67765
No 112
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.41 E-value=1e-12 Score=82.26 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=60.2
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHH--hhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMA--AYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~--~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+++++|+|| ++||+.|+...+.|. ++.+.+.+ ++.++.|+.+. .|....+.+.|++.
T Consensus 28 ~~k~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~------------------~~~~~~l~~~~~v~ 87 (133)
T 3fk8_A 28 THKPTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN------------------FDRNLELSQAYGDP 87 (133)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT------------------TTSSHHHHHHTTCG
T ss_pred cCCcEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc------------------ccchHHHHHHhCCc
Confidence 5677877776 999999999999999 88888765 49999998863 35567788889882
Q ss_pred CCCCCCCCCCCccceeEEEECCCCcc
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.. ..+|+++++|++|++
T Consensus 88 ~~---------~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 88 IQ---------DGIPAVVVVNSDGKV 104 (133)
T ss_dssp GG---------GCSSEEEEECTTSCE
T ss_pred cC---------CccceEEEECCCCCE
Confidence 11 259999999999986
No 113
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.35 E-value=2.1e-14 Score=93.86 Aligned_cols=97 Identities=8% Similarity=0.008 Sum_probs=58.4
Q ss_pred eecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCCCHHHHHHHHH--hcCCCC--ceeeC
Q 044272 22 FKLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCDDVKSHNEWIK--DIEAYT--PIIAD 94 (133)
Q Consensus 22 ~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d~~~~~~~~~~--~~~~~~--~~~~d 94 (133)
+.++.. +|++++|.|| ++||++|+.+.+.+ .++.+.+++ ++.++.|+.|....+.+... ..+... ..+.+
T Consensus 40 ~~~a~~-~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (172)
T 3f9u_A 40 MEYARQ-HNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGD 116 (172)
T ss_dssp HHHHHH-TTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHH
T ss_pred HHHHHH-cCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchhhhhhhhhh
Confidence 444444 6788888877 99999999974444 444444444 59999999875331100000 000000 11222
Q ss_pred CcHHH-HHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 95 PNREI-IKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 95 ~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
....+ .+.|++ ..+|+++++|++|+++
T Consensus 117 ~~~~~~~~~~~v------------~~~Pt~~lid~~G~~~ 144 (172)
T 3f9u_A 117 KWSYLQRVKFGA------------NAQPFYVLIDNEGNPL 144 (172)
T ss_dssp HHHHHHHHHHSC------------CCSSEEEEECTTSCBS
T ss_pred hhhHHHHHHcCC------------CCcceEEEECCCCCEE
Confidence 22233 578998 4799999999999874
No 114
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.34 E-value=1.9e-12 Score=80.55 Aligned_cols=78 Identities=13% Similarity=0.176 Sum_probs=58.8
Q ss_pred eeecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcH
Q 044272 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNR 97 (133)
Q Consensus 21 ~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~ 97 (133)
.+++++. ++++++|.|| ++||+.|+...+.+ .++.+.++ .++.++.|..+. +...
T Consensus 19 ~~~~~~~-~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~-------------------~~~~ 76 (130)
T 2kuc_A 19 ALKRAEV-EDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYFN-RHFVNLKMDMEK-------------------GEGV 76 (130)
T ss_dssp HHHHHHH-HSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHHH-HHSEEEEECSSS-------------------TTHH
T ss_pred HHHHHHh-cCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHHh-cCeEEEEEecCC-------------------cchH
Confidence 3666666 5678888877 89999999999998 44444333 347777777664 3466
Q ss_pred HHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 98 EIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.+.+.|++ ..+|+++++|++|++
T Consensus 77 ~~~~~~~v------------~~~Pt~~~~d~~G~~ 99 (130)
T 2kuc_A 77 ELRKKYGV------------HAYPTLLFINSSGEV 99 (130)
T ss_dssp HHHHHTTC------------CSSCEEEEECTTSCE
T ss_pred HHHHHcCC------------CCCCEEEEECCCCcE
Confidence 78899998 469999999999986
No 115
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.32 E-value=8e-12 Score=78.62 Aligned_cols=69 Identities=12% Similarity=0.237 Sum_probs=56.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.|.++.+++++ ++.++.|..|. +..+.+.|++
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v--- 90 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEK---------------------EQELAGAFGI--- 90 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCC---------------------CHHHHHHcCC---
Confidence 4567777766 89999999999999999888764 48888888752 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++|++|++
T Consensus 91 ---------~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 91 ---------RSIPSILFIPMEGKP 105 (136)
T ss_dssp ---------CSSCEEEEECSSSCC
T ss_pred ---------CCCCEEEEECCCCcE
Confidence 469999999999986
No 116
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.29 E-value=1.1e-11 Score=79.04 Aligned_cols=91 Identities=10% Similarity=0.102 Sum_probs=68.3
Q ss_pred CCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHH
Q 044272 5 TIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIK 83 (133)
Q Consensus 5 ~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~ 83 (133)
..|.++++..+.+.++ ++...- ..+++++|.|| ++||+.|+...+.|.++.+++.+. +.++.|..|
T Consensus 30 ~~~~~~~~~~v~~l~~~~~~~~~-~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~---------- 96 (148)
T 3p2a_A 30 RCGHSLFDGEVINATAETLDKLL-QDDLPMVIDFW-APWCGPCRSFAPIFAETAAERAGK-VRFVKVNTE---------- 96 (148)
T ss_dssp TTCCBTTCCCCEECCTTTHHHHT-TCSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETT----------
T ss_pred hcCCccccCCceecCHHHHHHHH-hcCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECc----------
Confidence 3466777888887777 544332 26677777776 999999999999999998888643 888888875
Q ss_pred hcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 84 DIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 84 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.+..+.+.|++ ..+|+++++ ++|++
T Consensus 97 -----------~~~~l~~~~~v------------~~~Pt~~~~-~~G~~ 121 (148)
T 3p2a_A 97 -----------AEPALSTRFRI------------RSIPTIMLY-RNGKM 121 (148)
T ss_dssp -----------TCHHHHHHTTC------------CSSSEEEEE-ETTEE
T ss_pred -----------CCHHHHHHCCC------------CccCEEEEE-ECCeE
Confidence 24467788888 468888888 57765
No 117
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.29 E-value=1.3e-11 Score=74.82 Aligned_cols=68 Identities=18% Similarity=0.272 Sum_probs=54.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.|.++.++++ ++.++.|..+. .+..+.+.|++
T Consensus 23 ~~~~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~--------------------~~~~~~~~~~v--- 76 (111)
T 2pu9_C 23 GDKPVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ--------------------ENKTLAKELGI--- 76 (111)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--------------------TTHHHHHHHCC---
T ss_pred CCCEEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc--------------------chHHHHHHcCC---
Confidence 4677777776 8999999999999999888775 58898888862 24578888998
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+ ++++++|++
T Consensus 77 ---------~~~Pt-~~~~~~G~~ 90 (111)
T 2pu9_C 77 ---------RVVPT-FKILKENSV 90 (111)
T ss_dssp ---------SBSSE-EEEESSSSE
T ss_pred ---------CeeeE-EEEEeCCcE
Confidence 36888 666789876
No 118
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.27 E-value=1.7e-11 Score=74.58 Aligned_cols=68 Identities=12% Similarity=0.190 Sum_probs=55.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ ++.++.|+.|. +..+.+.|++
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v--- 69 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE---------------------NQETAGKYGV--- 69 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT---------------------CCSHHHHTTC---
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC---------------------CHHHHHHcCC---
Confidence 4567777766 89999999999999999888875 59999998763 3457788988
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 70 ---------~~~Pt~~~~-~~G~~ 83 (112)
T 2voc_A 70 ---------MSIPTLLVL-KDGEV 83 (112)
T ss_dssp ---------CSBSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-eCCEE
Confidence 468999999 88876
No 119
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.26 E-value=8.8e-12 Score=78.33 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=53.9
Q ss_pred eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHH
Q 044272 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREII 100 (133)
Q Consensus 21 ~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 100 (133)
.-.+++. ++++++|.|| ++||+.|+...+.|.++.+++ ++.++.|..|. +..+.
T Consensus 32 ~~~l~~~-~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~---------------------~~~l~ 85 (133)
T 3cxg_A 32 NQVFSST-QNSSIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI---------------------HPKLN 85 (133)
T ss_dssp HHHHTC--CCSEEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT---------------------CHHHH
T ss_pred HHHHHhc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc---------------------hHHHH
Confidence 3344554 5677777776 999999999999999887765 47787777552 45688
Q ss_pred HHcCCCCCCCCCCCCCCccceeEEEE-CCCCc
Q 044272 101 KQLNMVDPDEKDSSGKQLPSRALHIV-GPDHQ 131 (133)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~p~~~li-d~~G~ 131 (133)
+.|++ ..+|+++++ |++|+
T Consensus 86 ~~~~v------------~~~Pt~~~~~~~~g~ 105 (133)
T 3cxg_A 86 DQHNI------------KALPTFEFYFNLNNE 105 (133)
T ss_dssp HHTTC------------CSSSEEEEEEEETTE
T ss_pred HhcCC------------CCCCEEEEEEecCCC
Confidence 88998 468999988 45554
No 120
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.25 E-value=2e-11 Score=74.80 Aligned_cols=67 Identities=10% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.|.++.+++++ +.++.|..|. +..+.+.|++
T Consensus 30 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~---------------------~~~l~~~~~v--- 82 (116)
T 3qfa_C 30 GDKLVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD---------------------CQDVASECEV--- 82 (116)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT---------------------THHHHHHTTC---
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC---------------------CHHHHHHcCC---
Confidence 5677777776 99999999999999999888763 8888888752 4577888998
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 83 ---------~~~Pt~~~~-~~G~~ 96 (116)
T 3qfa_C 83 ---------KSMPTFQFF-KKGQK 96 (116)
T ss_dssp ---------CSSSEEEEE-SSSSE
T ss_pred ---------ccccEEEEE-eCCeE
Confidence 468998888 67865
No 121
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.24 E-value=4.6e-12 Score=82.88 Aligned_cols=76 Identities=11% Similarity=0.204 Sum_probs=53.4
Q ss_pred ecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHH
Q 044272 23 KLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQ 102 (133)
Q Consensus 23 ~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 102 (133)
.++++ ++++++|.|| ++|||.|+.++|.|.++.+.+. ++.++.|+.|.. .+.+.++..
T Consensus 48 ~l~~~-~~k~vvv~F~-A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~---~~~~~~~~~--------------- 105 (167)
T 1z6n_A 48 RLQRI-ERRYRLLVAG-EMWCPDCQINLAALDFAQRLQP--NIELAIISKGRA---EDDLRQRLA--------------- 105 (167)
T ss_dssp HHHTC-CSCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHH---HHHTTTTTT---------------
T ss_pred HHHHh-CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCC---HHHHHHHHH---------------
Confidence 35556 6777777766 9999999999999999887664 588888877522 122222221
Q ss_pred cCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 103 LNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.++ ..+|+++++|++|++
T Consensus 106 ~~v------------~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 106 LER------------IAIPLVLVLDEEFNL 123 (167)
T ss_dssp CSS------------CCSSEEEEECTTCCE
T ss_pred cCC------------CCcCeEEEECCCCCE
Confidence 023 479999999998876
No 122
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.24 E-value=1.3e-11 Score=76.68 Aligned_cols=84 Identities=8% Similarity=0.139 Sum_probs=59.7
Q ss_pred CceEEecCCC-e--eecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 11 PNLQVQTNQG-N--FKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 11 p~f~l~~~~G-~--~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
+-+++.+.++ . ++.+.. .+++++|+|| ++||+.|+...+.|.++.+++. ++.++.|..|
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~-~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d-------------- 78 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANE-SKTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTD-------------- 78 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHH-TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETT--------------
T ss_pred cEEEeCCHHHHHHHHHHhhh-cCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECc--------------
Confidence 3444544444 3 333333 5677777766 8999999999999999888775 6888888875
Q ss_pred CCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 88 YTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 88 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.+..+.+.|++ ..+|+++++ ++|++
T Consensus 79 -------~~~~l~~~~~v------------~~~Pt~~~~-~~G~~ 103 (124)
T 1xfl_A 79 -------ELKSVASDWAI------------QAMPTFMFL-KEGKI 103 (124)
T ss_dssp -------TSHHHHHHTTC------------CSSSEEEEE-ETTEE
T ss_pred -------cCHHHHHHcCC------------CccCEEEEE-ECCEE
Confidence 24567788888 368887666 78875
No 123
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.24 E-value=1.7e-11 Score=76.45 Aligned_cols=88 Identities=7% Similarity=0.002 Sum_probs=57.7
Q ss_pred CceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc-CceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 11 PNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR-EVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 11 p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
++-.+.+.++ ++...-...+++++|.|| ++||++|+...+.|.++.++++.. ++.++.|..+..
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~------------- 70 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN------------- 70 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS-------------
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC-------------
Confidence 3334445555 443322213567766666 999999999999999999888753 466766665421
Q ss_pred CceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 89 TPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 89 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+.+.|++ ..+|++++++++|++
T Consensus 71 --------~~~~~~~~v------------~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 71 --------DITNDQYKV------------EGFPTIYFAPSGDKK 94 (133)
T ss_dssp --------CCCCSSCCC------------SSSSEEEEECTTCTT
T ss_pred --------HHHHhhcCC------------CcCCEEEEEeCCCcc
Confidence 122345676 469999999877654
No 124
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.24 E-value=3.8e-11 Score=72.76 Aligned_cols=69 Identities=19% Similarity=0.348 Sum_probs=52.9
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.++++..++.++.|..|. +..+.+.|++
T Consensus 20 ~~~~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~---------------------~~~~~~~~~v--- 74 (112)
T 3d6i_A 20 GDKLIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE---------------------NSEISELFEI--- 74 (112)
T ss_dssp TTCCEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc---------------------CHHHHHHcCC---
Confidence 3667777766 99999999999999999888755679999998874 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 75 ---------~~~Pt~~~~-~~G~~ 88 (112)
T 3d6i_A 75 ---------SAVPYFIII-HKGTI 88 (112)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-ECCEE
Confidence 468888877 68875
No 125
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.22 E-value=1.6e-11 Score=75.48 Aligned_cols=92 Identities=11% Similarity=0.192 Sum_probs=62.3
Q ss_pred CCCCCCCCceEEecCCC-eeecccc-cCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDF-IGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~-~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
...|...+.+.+.+.++ .-.+.+. ..+++++|.|| ++||+.|+...+.|.++.+++. ++.++.|..|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~------- 75 (122)
T 2vlu_A 6 TAAAVAAEVISVHSLEQWTMQIEEANTAKKLVVIDFT-ASWCGPCRIMAPVFADLAKKFP--NAVFLKVDVDE------- 75 (122)
T ss_dssp ------CCCEEECSHHHHHHHHHHHHHTTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------
T ss_pred cccCCCCcceeccCHHHHHHHHHHhhccCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECCC-------
Confidence 45566677777766655 3333321 14567777776 8999999999999999888776 48898888763
Q ss_pred HHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 82 IKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
+..+.+.|++ ..+|+++++ ++|++
T Consensus 76 --------------~~~~~~~~~v------------~~~Pt~~~~-~~G~~ 99 (122)
T 2vlu_A 76 --------------LKPIAEQFSV------------EAMPTFLFM-KEGDV 99 (122)
T ss_dssp --------------CHHHHHHTTC------------CSSSEEEEE-ETTEE
T ss_pred --------------CHHHHHHcCC------------CcccEEEEE-eCCEE
Confidence 3467788888 368886665 78875
No 126
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.22 E-value=4.6e-11 Score=71.44 Aligned_cols=68 Identities=15% Similarity=0.251 Sum_probs=54.0
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++.++ +.++.|+.|. +..+.+.|++
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~---------------------~~~~~~~~~v--- 69 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE---------------------NPETTSQFGI--- 69 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC---------------------CHHHHHHcCC---
Confidence 4566777766 899999999999999988887653 8888888753 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 70 ---------~~~Pt~~~~-~~G~~ 83 (105)
T 1nsw_A 70 ---------MSIPTLILF-KGGRP 83 (105)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------ccccEEEEE-eCCeE
Confidence 468999998 78875
No 127
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.21 E-value=6e-11 Score=71.84 Aligned_cols=67 Identities=7% Similarity=0.165 Sum_probs=53.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.++++ ++.++.|..| ....+.+.|++
T Consensus 23 ~~k~vlv~f~-a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~---------------------~~~~l~~~~~v--- 75 (109)
T 3f3q_A 23 QDKLVVVDFY-ATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVD---------------------ELGDVAQKNEV--- 75 (109)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETT---------------------TCHHHHHHTTC---
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECC---------------------CCHHHHHHcCC---
Confidence 4667777766 9999999999999999988875 5888888764 34567888888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 76 ---------~~~Pt~~~~~-~G~~ 89 (109)
T 3f3q_A 76 ---------SAMPTLLLFK-NGKE 89 (109)
T ss_dssp ---------CSSSEEEEEE-TTEE
T ss_pred ---------CccCEEEEEE-CCEE
Confidence 4689999887 7765
No 128
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.20 E-value=4.5e-11 Score=73.73 Aligned_cols=68 Identities=19% Similarity=0.328 Sum_probs=53.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.++++ ++.++.|..+. .+..+.+.|++
T Consensus 36 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~--------------------~~~~~~~~~~v--- 89 (124)
T 1faa_A 36 GDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ--------------------ENKTLAKELGI--- 89 (124)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--------------------TTHHHHHHHCC---
T ss_pred CCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc--------------------chHHHHHHcCC---
Confidence 5677888777 9999999999999999888775 58888888762 24577888998
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+ +++.++|++
T Consensus 90 ---------~~~Pt-~~~~~~G~~ 103 (124)
T 1faa_A 90 ---------RVVPT-FKILKENSV 103 (124)
T ss_dssp ---------SSSSE-EEEEETTEE
T ss_pred ---------CeeeE-EEEEeCCcE
Confidence 36887 445578875
No 129
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.20 E-value=6.6e-11 Score=71.71 Aligned_cols=68 Identities=16% Similarity=0.284 Sum_probs=54.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.+.++.+.++++ +.++.|..|. +..+.+.|++
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~---------------------~~~~~~~~~v--- 77 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP---------------------NPTTVKKYKV--- 77 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT---------------------CHHHHHHTTC---
T ss_pred CCceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC---------------------CHHHHHHcCC---
Confidence 5567777766 899999999999999998888754 8999998763 3457788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 78 ---------~~~Pt~~~~-~~G~~ 91 (115)
T 1thx_A 78 ---------EGVPALRLV-KGEQI 91 (115)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CceeEEEEE-cCCEE
Confidence 468999999 88875
No 130
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.20 E-value=2.1e-11 Score=73.81 Aligned_cols=71 Identities=14% Similarity=0.216 Sum_probs=52.8
Q ss_pred cccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHc
Q 044272 24 LHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQL 103 (133)
Q Consensus 24 l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 103 (133)
+++. ++++++|.|| ++||++|+...|.+.++.+.+. ++.++.|..| ....+++.|
T Consensus 15 l~~~-~~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d---------------------~~~~l~~~~ 69 (105)
T 3zzx_A 15 LNEA-GNKLVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVD---------------------ECEDIAQDN 69 (105)
T ss_dssp HHHT-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETT---------------------TCHHHHHHT
T ss_pred HHhc-CCCEEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEecc---------------------cCHHHHHHc
Confidence 3443 5677777776 9999999999999999877664 5667666654 345688889
Q ss_pred CCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 104 NMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 104 ~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
++ ..+|+++++ ++|++
T Consensus 70 ~V------------~~~PT~~~~-~~G~~ 85 (105)
T 3zzx_A 70 QI------------ACMPTFLFM-KNGQK 85 (105)
T ss_dssp TC------------CBSSEEEEE-ETTEE
T ss_pred CC------------CeecEEEEE-ECCEE
Confidence 99 468887776 68875
No 131
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.19 E-value=2.4e-12 Score=83.82 Aligned_cols=90 Identities=10% Similarity=0.054 Sum_probs=59.7
Q ss_pred CceEEecCCCeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCc
Q 044272 11 PNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90 (133)
Q Consensus 11 p~f~l~~~~G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~ 90 (133)
+++.+.+.+..+++... .+++++|.|| ++||+.|+.+.+.|.++.+.++ .++.++.|+.|....
T Consensus 28 ~~i~w~~~~~~~~~~~~-~~k~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~-~~~~~~~v~~d~~~~------------- 91 (164)
T 1sen_A 28 DHIHWRTLEDGKKEAAA-SGLPLMVIIH-KSWCGACKALKPKFAESTEISE-LSHNFVMVNLEDEEE------------- 91 (164)
T ss_dssp TTSCBCCHHHHHHHHHH-HTCCEEEEEE-CTTCHHHHHHHHHHHTCHHHHH-HHTTSEEEEEEGGGS-------------
T ss_pred ccccccCHHHHHHHHHh-cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhh-cCCeEEEEEecCCch-------------
Confidence 45555444334555555 6788888887 8999999999999999755543 347788887753211
Q ss_pred eeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCccC
Q 044272 91 IIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 91 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
.+...|++.. ..+|+++++|++|+++
T Consensus 92 -------~~~~~~~~~~----------~~~Pt~~~~d~~G~~~ 117 (164)
T 1sen_A 92 -------PKDEDFSPDG----------GYIPRILFLDPSGKVH 117 (164)
T ss_dssp -------CSCGGGCTTC----------SCSSEEEEECTTSCBC
T ss_pred -------HHHHHhcccC----------CcCCeEEEECCCCCEE
Confidence 0123344411 2589999999999874
No 132
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.19 E-value=8.5e-11 Score=71.12 Aligned_cols=68 Identities=13% Similarity=0.269 Sum_probs=52.9
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ .+.++.|+.|. +..+.+.|++
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v--- 75 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE---------------------NPGTAAKYGV--- 75 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC---------------------CHHHHHhCCC---
Confidence 4567777766 89999999999999999888864 38899888763 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 76 ---------~~~Pt~~~~-~~G~~ 89 (112)
T 1t00_A 76 ---------MSIPTLNVY-QGGEV 89 (112)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-eCCEE
Confidence 368887766 68875
No 133
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.19 E-value=2.9e-11 Score=76.07 Aligned_cols=67 Identities=6% Similarity=0.067 Sum_probs=54.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.|.++.+++. ++.++.|..|. +..+.+.|++
T Consensus 45 ~~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~---------------------~~~~~~~~~v--- 97 (139)
T 3d22_A 45 DGKIVLANFS-ARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE---------------------LSDFSASWEI--- 97 (139)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------SHHHHHHTTC---
T ss_pred cCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc---------------------cHHHHHHcCC---
Confidence 4677777776 8999999999999999988774 69999998862 3567888888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 98 ---------~~~Pt~~~~-~~G~~ 111 (139)
T 3d22_A 98 ---------KATPTFFFL-RDGQQ 111 (139)
T ss_dssp ---------CEESEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-cCCeE
Confidence 468888877 88876
No 134
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.18 E-value=9.9e-11 Score=69.92 Aligned_cols=68 Identities=12% Similarity=0.205 Sum_probs=54.0
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.++++++ +.++.|..|. +..+.+.|++
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~---------------------~~~~~~~~~v--- 71 (106)
T 3die_A 18 ESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE---------------------NPSTAAKYEV--- 71 (106)
T ss_dssp CSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred cCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc---------------------CHHHHHhCCC---
Confidence 5667777776 999999999999999999888754 8888888752 3457778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 72 ---------~~~Pt~~~~~-~G~~ 85 (106)
T 3die_A 72 ---------MSIPTLIVFK-DGQP 85 (106)
T ss_dssp ---------CSBSEEEEEE-TTEE
T ss_pred ---------cccCEEEEEe-CCeE
Confidence 4688888885 7764
No 135
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.18 E-value=8.7e-11 Score=72.15 Aligned_cols=68 Identities=10% Similarity=0.184 Sum_probs=54.6
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.|.++.+++.+ ++.++.|..|. +..+.+.|++
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~---------------------~~~l~~~~~v--- 83 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD---------------------HTDLAIEYEV--- 83 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT---------------------THHHHHHTTC---
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC---------------------CHHHHHHcCC---
Confidence 4567777776 99999999999999999888765 48898888753 3467888888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 84 ---------~~~Pt~~~~-~~G~~ 97 (119)
T 1w4v_A 84 ---------SAVPTVLAM-KNGDV 97 (119)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-eCCcE
Confidence 468999888 78875
No 136
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.17 E-value=1.4e-10 Score=69.51 Aligned_cols=68 Identities=7% Similarity=0.135 Sum_probs=52.9
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ .+.++.|+.|. +..+.+.|++
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v--- 71 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE---------------------SPNVASEYGI--- 71 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------CHHHHHHHTC---
T ss_pred CCCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC---------------------CHHHHHHCCC---
Confidence 4567777766 89999999999999998888764 38888888753 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 72 ---------~~~Pt~~~~-~~G~~ 85 (107)
T 1dby_A 72 ---------RSIPTIMVF-KGGKK 85 (107)
T ss_dssp ---------CSSCEEEEE-SSSSE
T ss_pred ---------CcCCEEEEE-eCCEE
Confidence 368887776 68875
No 137
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.17 E-value=8e-11 Score=72.56 Aligned_cols=69 Identities=12% Similarity=0.140 Sum_probs=54.9
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.|.++.+++++.++.++.|+.|. +..+.+.|++
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~---------------------~~~~~~~~~v--- 86 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE---------------------QSQIAQEVGI--- 86 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT---------------------CHHHHHHHTC---
T ss_pred CCCEEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC---------------------CHHHHHHcCC---
Confidence 5566777766 89999999999999999998887679999998763 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 87 ---------~~~Pt~~~~-~~G~~ 100 (121)
T 2j23_A 87 ---------RAMPTFVFF-KNGQK 100 (121)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-ECCeE
Confidence 368888777 47765
No 138
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.16 E-value=1.5e-10 Score=71.86 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=54.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++. +.++.|..| .+..+.+.|++
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~---------------------~~~~l~~~~~v--- 87 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRLTPEWKKAATALKDV-VKVGAVNAD---------------------KHQSLGGQYGV--- 87 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETT---------------------TCHHHHHHHTC---
T ss_pred CCCeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCC---------------------CCHHHHHHcCC---
Confidence 3566766666 999999999999999998887653 888887754 34578888988
Q ss_pred CCCCCCCCCccceeEEEECCCCc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQ 131 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~ 131 (133)
..+|++++++++|+
T Consensus 88 ---------~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 88 ---------QGFPTIKIFGANKN 101 (130)
T ss_dssp ---------CSSSEEEEESSCTT
T ss_pred ---------CccCEEEEEeCCCC
Confidence 46899999998886
No 139
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.16 E-value=1.2e-10 Score=70.45 Aligned_cols=67 Identities=9% Similarity=0.139 Sum_probs=52.9
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPD 109 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 109 (133)
+++++|.|| ++||+.|+...+.|.++.+++.+ ++.++.|..|. +..+.+.|++
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v---- 76 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA---------------------VAAVAEAAGI---- 76 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT---------------------THHHHHHHTC----
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc---------------------hHHHHHHcCC----
Confidence 677777776 89999999999999999888765 68899888753 4567788888
Q ss_pred CCCCCCCCccceeEEEECCCCcc
Q 044272 110 EKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 110 ~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 77 --------~~~Pt~~~~-~~G~~ 90 (112)
T 1ep7_A 77 --------TAMPTFHVY-KDGVK 90 (112)
T ss_dssp --------CBSSEEEEE-ETTEE
T ss_pred --------CcccEEEEE-ECCeE
Confidence 368886655 78875
No 140
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.16 E-value=1.4e-10 Score=69.38 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=54.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ ++.++.|..+. +..+.+.|++
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v--- 72 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD---------------------NPETPNAYQV--- 72 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT---------------------CCHHHHHTTC---
T ss_pred CCCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC---------------------CHHHHHhcCC---
Confidence 4567777766 89999999999999999888865 58888888763 2367788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 73 ---------~~~Pt~~~~-~~G~~ 86 (107)
T 2i4a_A 73 ---------RSIPTLMLV-RDGKV 86 (107)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CccCEEEEE-eCCEE
Confidence 468999998 88875
No 141
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=1.3e-10 Score=72.21 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=53.0
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH---cCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK---REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNM 105 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~---~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ .++.++.|..+. +..+.+.|++
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---------------------~~~l~~~~~v 81 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV---------------------NQVLASRYGI 81 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT---------------------CCHHHHHHTC
T ss_pred CCCeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC---------------------CHHHHHhCCC
Confidence 4566666665 99999999999999999998873 358888887652 3468888888
Q ss_pred CCCCCCCCCCCCccceeEEEECCCCc
Q 044272 106 VDPDEKDSSGKQLPSRALHIVGPDHQ 131 (133)
Q Consensus 106 ~~~~~~~~~~~~~~~p~~~lid~~G~ 131 (133)
..+|+++++++ |+
T Consensus 82 ------------~~~Pt~~~~~~-g~ 94 (133)
T 1x5d_A 82 ------------RGFPTIKIFQK-GE 94 (133)
T ss_dssp ------------CSSSEEEEEET-TE
T ss_pred ------------CeeCeEEEEeC-CC
Confidence 46899999987 54
No 142
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.16 E-value=6.6e-11 Score=75.79 Aligned_cols=68 Identities=10% Similarity=0.047 Sum_probs=52.9
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+.+.|.|.++.++++++ +.++.|..| ....+.+.|++
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d---------------------~~~~l~~~~~v--- 75 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVD---------------------QTAVYTQYFDI--- 75 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETT---------------------TCCHHHHHTTC---
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECC---------------------cCHHHHHHcCC---
Confidence 4677777776 999999999999999998888643 888888764 24467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
...|+++ ++++|++
T Consensus 76 ---------~~~Pt~~-~~~~G~~ 89 (149)
T 3gix_A 76 ---------SYIPSTV-FFFNGQH 89 (149)
T ss_dssp ---------CSSSEEE-EEETTEE
T ss_pred ---------CccCeEE-EEECCeE
Confidence 4688888 5567765
No 143
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.15 E-value=1.2e-10 Score=69.96 Aligned_cols=68 Identities=12% Similarity=0.179 Sum_probs=53.2
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ .+.++.|..|. +..+.+.|++
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v--- 72 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ---------------------NPGTAPKYGI--- 72 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT---------------------CTTHHHHTTC---
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCC---------------------CHHHHHHcCC---
Confidence 4566666665 89999999999999998888764 38888887653 2357788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 73 ---------~~~Pt~~~~-~~G~~ 86 (108)
T 2trx_A 73 ---------RGIPTLLLF-KNGEV 86 (108)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------cccCEEEEE-eCCEE
Confidence 468999998 78875
No 144
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.15 E-value=1.5e-10 Score=74.15 Aligned_cols=67 Identities=13% Similarity=0.258 Sum_probs=54.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.+++. ++.++.|..|. +..+.+.|++
T Consensus 31 ~~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~---------------------~~~l~~~~~v--- 83 (153)
T 2wz9_A 31 AKSLLVVHFW-APWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG---------------------VPEVSEKYEI--- 83 (153)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------SHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC---------------------CHHHHHHcCC---
Confidence 3677777776 9999999999999999888763 69999888763 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 84 ---------~~~Pt~~~~~-~G~~ 97 (153)
T 2wz9_A 84 ---------SSVPTFLFFK-NSQK 97 (153)
T ss_dssp ---------CSSSEEEEEE-TTEE
T ss_pred ---------CCCCEEEEEE-CCEE
Confidence 4689999998 8875
No 145
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.15 E-value=1.9e-10 Score=68.98 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=54.0
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ .+.++.|..| ....+.+.|++
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~---------------------~~~~~~~~~~i--- 73 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVD---------------------ENQKIADKYSV--- 73 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT---------------------TCHHHHHHTTC---
T ss_pred cCCeEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccc---------------------cCHHHHHhcCc---
Confidence 4567777776 99999999999999999888865 4888888764 34567788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 74 ---------~~~Pt~~~~-~~g~~ 87 (109)
T 3tco_A 74 ---------LNIPTTLIF-VNGQL 87 (109)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------ccCCEEEEE-cCCcE
Confidence 468999988 78865
No 146
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.14 E-value=1.6e-10 Score=68.93 Aligned_cols=68 Identities=10% Similarity=0.147 Sum_probs=52.2
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ .+.++.|+.|. +..+.+.|++
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v--- 70 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDE---------------------APGIATQYNI--- 70 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcc---------------------hHHHHHhCCC---
Confidence 4567777766 89999999999999998888764 38888888763 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 71 ---------~~~Pt~~~~-~~g~~ 84 (105)
T 1fb6_A 71 ---------RSIPTVLFF-KNGER 84 (105)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-eCCeE
Confidence 368887766 67765
No 147
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=3e-10 Score=70.19 Aligned_cols=66 Identities=9% Similarity=0.084 Sum_probs=52.2
Q ss_pred eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCC
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEK 111 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 111 (133)
.++|.|| ++||+.|+...+.+.++.+.+++.++.++.|..|. +..+.+.|++
T Consensus 24 ~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~~~~~~~v------ 75 (126)
T 1x5e_A 24 DWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE---------------------QPGLSGRFII------ 75 (126)
T ss_dssp EEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT---------------------CHHHHHHTTC------
T ss_pred CEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC---------------------CHHHHHHcCC------
Confidence 4666655 99999999999999999988876679999888652 3457788888
Q ss_pred CCCCCCccceeEEEECCCCcc
Q 044272 112 DSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 112 ~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 76 ------~~~Pt~~~~-~~G~~ 89 (126)
T 1x5e_A 76 ------NALPTIYHC-KDGEF 89 (126)
T ss_dssp ------CSSSEEEEE-ETTEE
T ss_pred ------cccCEEEEE-eCCeE
Confidence 368888888 77764
No 148
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.14 E-value=1.1e-10 Score=71.33 Aligned_cols=71 Identities=8% Similarity=0.169 Sum_probs=54.1
Q ss_pred ecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHH
Q 044272 23 KLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQ 102 (133)
Q Consensus 23 ~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 102 (133)
.+++. ++++++|.|| ++||+.|+...+.+.++.+++ ++.++.|..|. +..+.+.
T Consensus 27 ~l~~~-~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~---------------------~~~~~~~ 80 (117)
T 2xc2_A 27 LLEQH-KNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK---------------------LEETARK 80 (117)
T ss_dssp HHHHT-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT---------------------SHHHHHH
T ss_pred HHHhC-CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc---------------------cHHHHHH
Confidence 34444 5677777776 899999999999999987776 68888888752 3567788
Q ss_pred cCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 103 LNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
|++ ..+|+++++ ++|++
T Consensus 81 ~~v------------~~~Pt~~~~-~~G~~ 97 (117)
T 2xc2_A 81 YNI------------SAMPTFIAI-KNGEK 97 (117)
T ss_dssp TTC------------CSSSEEEEE-ETTEE
T ss_pred cCC------------CccceEEEE-eCCcE
Confidence 888 368886666 67875
No 149
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.13 E-value=1.2e-10 Score=72.14 Aligned_cols=76 Identities=14% Similarity=0.289 Sum_probs=59.1
Q ss_pred CCCeEEEEEeeCC-------CCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHH
Q 044272 29 GDNWTIIFSHPGD-------FTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIK 101 (133)
Q Consensus 29 ~~~~~vl~f~~~~-------~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 101 (133)
++++++|.|| ++ ||+.|+...|.|.++.+++.+ ++.++.|..++... | .|.+..+.+
T Consensus 23 ~~~~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~---~-----------~d~~~~~~~ 86 (123)
T 1wou_A 23 NGKTIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPY---W-----------KDPNNDFRK 86 (123)
T ss_dssp TTSEEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHH---H-----------HCTTCHHHH
T ss_pred CCCEEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchh---h-----------hchhHHHHH
Confidence 4677777776 88 999999999999999888754 58899998875431 1 245667888
Q ss_pred HcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 102 QLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.|++ ..+|+++++++.+++
T Consensus 87 ~~~i------------~~~Pt~~~~~~~~~~ 105 (123)
T 1wou_A 87 NLKV------------TAVPTLLKYGTPQKL 105 (123)
T ss_dssp HHCC------------CSSSEEEETTSSCEE
T ss_pred HCCC------------CeeCEEEEEcCCceE
Confidence 8999 479999999875543
No 150
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.13 E-value=2.3e-10 Score=67.86 Aligned_cols=67 Identities=10% Similarity=0.217 Sum_probs=53.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.+++++ +.++.|+.|. +..+.+.|++
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~---------------------~~~~~~~~~v--- 67 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE---------------------NPDIAARYGV--- 67 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred cCCcEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC---------------------CHHHHHhCCc---
Confidence 4566777766 89999999999999998887763 8898888753 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 68 ---------~~~Pt~~~~-~~g~~ 81 (104)
T 2e0q_A 68 ---------MSLPTVIFF-KDGEP 81 (104)
T ss_dssp ---------CSSCEEEEE-ETTEE
T ss_pred ---------cccCEEEEE-ECCeE
Confidence 468999888 78875
No 151
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.13 E-value=4.1e-10 Score=69.79 Aligned_cols=70 Identities=1% Similarity=-0.034 Sum_probs=52.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH----cCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK----REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLN 104 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~----~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (133)
.+++++|.|| ++||++|+...+.+.++.+.+.. .++.++.|..+ .+..+.+.|+
T Consensus 32 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~---------------------~~~~l~~~~~ 89 (127)
T 3h79_A 32 PEKDVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE---------------------KYPDVIERMR 89 (127)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT---------------------TCHHHHHHTT
T ss_pred CCCCEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc---------------------ccHhHHHhcC
Confidence 3566666666 99999999999999999887753 23666666654 2456788888
Q ss_pred CCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 105 MVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 105 ~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
+ ...|+++++++++++
T Consensus 90 v------------~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 90 V------------SGFPTMRYYTRIDKQ 105 (127)
T ss_dssp C------------CSSSEEEEECSSCSS
T ss_pred C------------ccCCEEEEEeCCCCC
Confidence 8 468999999877653
No 152
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.11 E-value=2.4e-10 Score=68.64 Aligned_cols=67 Identities=6% Similarity=0.087 Sum_probs=52.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.+++. ++.++.|..|. +..+.+.|++
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~---------------------~~~~~~~~~v--- 72 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ---------------------CQGTAATNNI--- 72 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------SHHHHHHTTC---
T ss_pred CCCEEEEEEE-CCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc---------------------CHHHHHhcCC---
Confidence 5667777766 8999999999999999888873 68888888753 2457778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 73 ---------~~~Pt~~~~-~~G~~ 86 (107)
T 1gh2_A 73 ---------SATPTFQFF-RNKVR 86 (107)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-ECCeE
Confidence 368888777 67764
No 153
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.11 E-value=2.7e-10 Score=69.90 Aligned_cols=69 Identities=6% Similarity=0.095 Sum_probs=53.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++.+ ++.++.|..+. ...+.+.|++
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v--- 73 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA---------------------YPQTCQKAGI--- 73 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC---------------------CHHHHHHcCC---
Confidence 4566777766 99999999999999999888865 58898888863 2356778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++++|++
T Consensus 74 ---------~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 74 ---------KAYPSVKLYQYERAK 88 (122)
T ss_dssp ---------CSSSEEEEEEEEGGG
T ss_pred ---------CccceEEEEeCCCcc
Confidence 368888888776654
No 154
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.11 E-value=3.4e-10 Score=67.75 Aligned_cols=68 Identities=10% Similarity=0.196 Sum_probs=53.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.+.++.+++.+ ++.++.|..|. +..+.+.|++
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~v--- 70 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE---------------------NPKTAMRYRV--- 70 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC---------------------CHhHHHhCCC---
Confidence 4567777766 99999999999999998888764 48888888763 3457788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 71 ---------~~~Pt~~~~-~~g~~ 84 (109)
T 2yzu_A 71 ---------MSIPTVILF-KDGQP 84 (109)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcCCEEEEE-eCCcE
Confidence 468899888 78875
No 155
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.11 E-value=1.9e-10 Score=70.66 Aligned_cols=77 Identities=12% Similarity=0.125 Sum_probs=56.7
Q ss_pred ecCCC-eeecc-ccc-CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCcee
Q 044272 16 QTNQG-NFKLH-DFI-GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPII 92 (133)
Q Consensus 16 ~~~~G-~~~l~-d~~-~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~ 92 (133)
.+.+| ..++. .+. .+++++|+|| ++||+.|+...+.|.++.+++ .++.++.|..|.
T Consensus 6 ~~~~g~~~~~~~~~~~~~~~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~------------------ 64 (118)
T 2f51_A 6 VHFNGTHEALLNRIKEAPGLVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK------------------ 64 (118)
T ss_dssp EEECSCHHHHHHHHHHCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT------------------
T ss_pred eEecCCHHHHHHHHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC------------------
Confidence 44455 34444 221 4567777766 999999999999999988887 479999998763
Q ss_pred eCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECC
Q 044272 93 ADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGP 128 (133)
Q Consensus 93 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~ 128 (133)
+..+.+.|++ ..+|++++++.
T Consensus 65 ---~~~~~~~~~i------------~~~Pt~~~~~~ 85 (118)
T 2f51_A 65 ---NGNAADAYGV------------SSIPALFFVKK 85 (118)
T ss_dssp ---CHHHHHHTTC------------CSSSEEEEEEE
T ss_pred ---CHHHHHhcCC------------CCCCEEEEEeC
Confidence 2457788888 46899998875
No 156
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.10 E-value=2.6e-10 Score=69.66 Aligned_cols=67 Identities=12% Similarity=0.235 Sum_probs=52.0
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.|.++.+++. ++.++.|..|. +..+.+.|++
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~--~v~~~~vd~~~---------------------~~~l~~~~~v--- 81 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMMQPHLTKLIQAYP--DVRFVKCDVDE---------------------SPDIAKECEV--- 81 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCC---------------------CHHHHHHCCC---
Confidence 4567777766 9999999999999999888775 38888888752 3457788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 82 ---------~~~Pt~~~~-~~G~~ 95 (114)
T 2oe3_A 82 ---------TAMPTFVLG-KDGQL 95 (114)
T ss_dssp ---------CSBSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-eCCeE
Confidence 368887765 78875
No 157
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.10 E-value=1e-10 Score=70.17 Aligned_cols=67 Identities=13% Similarity=0.252 Sum_probs=45.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++. ++.++.|..|. +..+.+.|++
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~---------------------~~~l~~~~~v--- 69 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD---------------------MQEIAGRYAV--- 69 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC---------------------C------------
T ss_pred cCCCEEEEEe-CCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC---------------------CHHHHHhcCC---
Confidence 4566766766 8999999999999999988873 68888887652 2356677888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 70 ---------~~~Pt~~~~~-~G~~ 83 (105)
T 4euy_A 70 ---------FTGPTVLLFY-NGKE 83 (105)
T ss_dssp ---------CCCCEEEEEE-TTEE
T ss_pred ---------CCCCEEEEEe-CCeE
Confidence 4689988884 7765
No 158
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.10 E-value=2.1e-10 Score=72.05 Aligned_cols=68 Identities=4% Similarity=0.122 Sum_probs=51.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcC--ceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKRE--VKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+++++|+|| ++||+.|+...+.|.++.+.+++.+ +.++.|..+. +..+.+.|++
T Consensus 33 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~~~~~~~v- 89 (140)
T 2dj1_A 33 DKDTVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS---------------------ASMLASKFDV- 89 (140)
T ss_dssp TCSEEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT---------------------CHHHHHHTTC-
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc---------------------cHHHHHHCCC-
Confidence 4566666665 8999999999999999999988664 6666665442 3567788888
Q ss_pred CCCCCCCCCCCccceeEEEECCCCc
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPDHQ 131 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~G~ 131 (133)
..+|+++++ ++|+
T Consensus 90 -----------~~~Pt~~~~-~~G~ 102 (140)
T 2dj1_A 90 -----------SGYPTIKIL-KKGQ 102 (140)
T ss_dssp -----------CSSSEEEEE-ETTE
T ss_pred -----------CccCeEEEE-ECCc
Confidence 368888888 6675
No 159
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=2.1e-10 Score=72.09 Aligned_cols=75 Identities=5% Similarity=0.014 Sum_probs=52.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.+++++.++.++.|..+. ...+.+.|++...
T Consensus 25 ~~~~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~---------------------~~~~~~~~~v~~~ 82 (137)
T 2dj0_A 25 KRVTWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR---------------------YTDVSTRYKVSTS 82 (137)
T ss_dssp TTSCEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT---------------------CHHHHHHTTCCCC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc---------------------CHHHHHHccCccc
Confidence 4456777766 99999999999999999988875568888887653 2235566666210
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.....+|+++++ ++|++
T Consensus 83 ------~~~~~~Pt~~~~-~~G~~ 99 (137)
T 2dj0_A 83 ------PLTKQLPTLILF-QGGKE 99 (137)
T ss_dssp ------SSSSCSSEEEEE-SSSSE
T ss_pred ------CCcCCCCEEEEE-ECCEE
Confidence 001268888888 57764
No 160
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.09 E-value=3.8e-10 Score=67.29 Aligned_cols=67 Identities=12% Similarity=0.227 Sum_probs=53.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.++++ ++.++.|..|. ...+.+.|++
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~---------------------~~~~~~~~~v--- 71 (105)
T 3m9j_A 19 GDKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDD---------------------CQDVASESEV--- 71 (105)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhh---------------------hHHHHHHcCC---
Confidence 5677777776 8999999999999999988775 48888888752 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 72 ---------~~~Pt~~~~-~~g~~ 85 (105)
T 3m9j_A 72 ---------KSMPTFQFF-KKGQK 85 (105)
T ss_dssp ---------CBSSEEEEE-ETTEE
T ss_pred ---------CcCcEEEEE-ECCeE
Confidence 468999988 66754
No 161
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.09 E-value=1.5e-10 Score=77.87 Aligned_cols=84 Identities=12% Similarity=0.136 Sum_probs=60.1
Q ss_pred ceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCc
Q 044272 12 NLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90 (133)
Q Consensus 12 ~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~ 90 (133)
+..+.+.++ ++...-. .+++++|.|| ++||+.|+...+.+.++.+++++ .+.++.|..+.
T Consensus 96 ~~~v~~l~~~~f~~~~~-~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~---------------- 156 (210)
T 3apq_A 96 DPEIITLERREFDAAVN-SGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGD---------------- 156 (210)
T ss_dssp CTTSEECCHHHHHHHHH-HSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT----------------
T ss_pred CCceEEecHHHHHHHHc-cCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCc----------------
Confidence 334444444 3333222 5677777776 99999999999999999888864 38888887653
Q ss_pred eeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 91 IIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 91 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
...+.+.|++ ..+|+++++ ++|++
T Consensus 157 -----~~~l~~~~~v------------~~~Pt~~~~-~~G~~ 180 (210)
T 3apq_A 157 -----DRMLCRMKGV------------NSYPSLFIF-RSGMA 180 (210)
T ss_dssp -----CHHHHHHTTC------------CSSSEEEEE-CTTSC
T ss_pred -----cHHHHHHcCC------------CcCCeEEEE-ECCCc
Confidence 2357778888 468998888 88875
No 162
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.09 E-value=5.1e-10 Score=66.77 Aligned_cols=68 Identities=12% Similarity=0.191 Sum_probs=52.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
+++++++.|| ++||+.|+...+.+.++.++++ .++.++.|..| .+..+.+.|++
T Consensus 19 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~---------------------~~~~~~~~~~v--- 72 (106)
T 1xwb_A 19 SGKLVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVD---------------------ECEDIAMEYNI--- 72 (106)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETT---------------------TCHHHHHHTTC---
T ss_pred CCCEEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEecc---------------------chHHHHHHcCC---
Confidence 5677777776 8999999999999999888775 35888888875 24567788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 73 ---------~~~Pt~~~~-~~G~~ 86 (106)
T 1xwb_A 73 ---------SSMPTFVFL-KNGVK 86 (106)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-cCCcE
Confidence 358886655 67765
No 163
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.09 E-value=2.8e-10 Score=68.95 Aligned_cols=67 Identities=19% Similarity=0.343 Sum_probs=52.0
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.|.++.+.+. ++.++.|..+. ...+.+.|++
T Consensus 18 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~---------------------~~~l~~~~~v--- 70 (110)
T 2l6c_A 18 GLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA---------------------RPELMKELGF--- 70 (110)
T ss_dssp TCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG---------------------CHHHHHHTTC---
T ss_pred cCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC---------------------CHHHHHHcCC---
Confidence 5566766665 8999999999999999877764 58888777642 4457788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 71 ---------~~~Pt~~~~-~~G~~ 84 (110)
T 2l6c_A 71 ---------ERVPTLVFI-RDGKV 84 (110)
T ss_dssp ---------CSSCEEEEE-ESSSE
T ss_pred ---------cccCEEEEE-ECCEE
Confidence 468999988 78875
No 164
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.09 E-value=3.8e-10 Score=72.62 Aligned_cols=68 Identities=9% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.|.++.++++++ +.++.|..|. +..+.+.|++
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~---------------------~~~l~~~~~i--- 116 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA---------------------HPAVAGRHRI--- 116 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT---------------------STHHHHHTTC---
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc---------------------cHHHHHHcCC---
Confidence 5667777776 999999999999999999888754 8999888762 3467888998
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 117 ---------~~~Pt~~~~-~~G~~ 130 (155)
T 2ppt_A 117 ---------QGIPAFILF-HKGRE 130 (155)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcCCEEEEE-eCCeE
Confidence 468999888 68875
No 165
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.09 E-value=1.1e-10 Score=72.77 Aligned_cols=68 Identities=10% Similarity=0.125 Sum_probs=53.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.+.++.+++++ ++.++.|..|. +..+.+.|++
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v--- 92 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQ---------------------NPGTAPKYGI--- 92 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTT---------------------CCTTSGGGTC---
T ss_pred cCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC---------------------CHHHHHHcCC---
Confidence 4566666665 99999999999999999888764 38888888763 2245677888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 93 ---------~~~Pt~~~~-~~G~~ 106 (128)
T 2o8v_B 93 ---------RGIPTLLLF-KNGEV 106 (128)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CccCEEEEE-eCCEE
Confidence 468999999 88875
No 166
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.08 E-value=4.3e-10 Score=68.42 Aligned_cols=67 Identities=15% Similarity=0.244 Sum_probs=52.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.+.++.++++ ++.++.|..|. ...+.+.|++
T Consensus 27 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~---------------------~~~~~~~~~v--- 79 (118)
T 2vm1_A 27 TGKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE---------------------LKDVAEAYNV--- 79 (118)
T ss_dssp HTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------SHHHHHHTTC---
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc---------------------CHHHHHHcCC---
Confidence 3567777776 8999999999999999888775 68888888752 3467778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 80 ---------~~~Pt~~~~-~~g~~ 93 (118)
T 2vm1_A 80 ---------EAMPTFLFI-KDGEK 93 (118)
T ss_dssp ---------CSBSEEEEE-ETTEE
T ss_pred ---------CcCcEEEEE-eCCeE
Confidence 368887777 67765
No 167
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.08 E-value=5.3e-10 Score=66.47 Aligned_cols=67 Identities=15% Similarity=0.219 Sum_probs=52.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.++++ ++.++.|..|. ...+.+.|++
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~---------------------~~~~~~~~~v--- 70 (104)
T 2vim_A 18 KGRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ---------------------NEEAAAKYSV--- 70 (104)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC---------------------CHHHHHHcCC---
Confidence 5677777776 9999999999999999888775 69999998862 3457778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 71 ---------~~~Pt~~~~~-~g~~ 84 (104)
T 2vim_A 71 ---------TAMPTFVFIK-DGKE 84 (104)
T ss_dssp ---------CSSSEEEEEE-TTEE
T ss_pred ---------ccccEEEEEe-CCcE
Confidence 3688877664 7765
No 168
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.08 E-value=5.3e-10 Score=67.30 Aligned_cols=68 Identities=4% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+.+++ .+.++.|..|. ...+.+.|++
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v--- 74 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEE---------------------EKTLFQRFSL--- 74 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCc---------------------ChhHHHhcCC---
Confidence 4567777766 89999999999999999888764 48888888752 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 75 ---------~~~Pt~~~~-~~g~~ 88 (111)
T 3gnj_A 75 ---------KGVPQILYF-KDGEY 88 (111)
T ss_dssp ---------CSSCEEEEE-ETTEE
T ss_pred ---------CcCCEEEEE-ECCEE
Confidence 468888888 57754
No 169
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.07 E-value=4.3e-10 Score=69.85 Aligned_cols=67 Identities=22% Similarity=0.295 Sum_probs=53.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.|.++.+++. ++.++.|..|. +..+.+.|++
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~---------------------~~~l~~~~~v--- 88 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN---------------------NSEIVSKCRV--- 88 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred cCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC---------------------CHHHHHHcCC---
Confidence 5667777776 9999999999999999888873 69999998863 3467788888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 89 ---------~~~Pt~~i~-~~G~~ 102 (125)
T 1r26_A 89 ---------LQLPTFIIA-RSGKM 102 (125)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-eCCeE
Confidence 368887666 78875
No 170
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.07 E-value=3.3e-10 Score=69.35 Aligned_cols=59 Identities=12% Similarity=0.058 Sum_probs=42.0
Q ss_pred EEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH----cCceEEEEeCC
Q 044272 14 QVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK----REVKLLGLSCD 73 (133)
Q Consensus 14 ~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~----~~v~vv~is~d 73 (133)
.+.+.++ ++...-...+++++|.|| ++||++|+...+.+.++.+++++ .++.++.|..+
T Consensus 8 ~v~~l~~~~f~~~v~~~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 8 PVTVVVAKNYNEIVLDDTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp SSEECCTTTTTTSSSCTTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred CeEEecccCHHHHhhcCCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 3444455 443321125667777776 89999999999999999999875 25788888765
No 171
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.63 E-value=1.7e-11 Score=76.33 Aligned_cols=78 Identities=10% Similarity=0.201 Sum_probs=53.6
Q ss_pred eeecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcH
Q 044272 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNR 97 (133)
Q Consensus 21 ~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~ 97 (133)
.++++.. .+++++|+|| ++||+.|+...+.+ .++.+.+++ ++.++.|..++. ...
T Consensus 11 ~~~~~~~-~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-------------------~~~ 68 (130)
T 2lst_A 11 ALALAQA-HGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-------------------EGQ 68 (130)
Confidence 5667666 6677777776 99999999999999 777666654 477777766532 124
Q ss_pred HHHHHcCCCCCCCCCCCCCCccceeEEEECC-CCcc
Q 044272 98 EIIKQLNMVDPDEKDSSGKQLPSRALHIVGP-DHQV 132 (133)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~-~G~i 132 (133)
.+.+.|++ ..+|+++++|+ +|++
T Consensus 69 ~~~~~~~v------------~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 69 ELARRYRV------------PGTPTFVFLVPKAGAW 92 (130)
Confidence 45566666 35777777774 4654
No 172
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.05 E-value=4.1e-10 Score=68.01 Aligned_cols=67 Identities=13% Similarity=0.284 Sum_probs=50.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+.+. ++.++.|..|. ...+.+.|++
T Consensus 25 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~---------------------~~~~~~~~~v--- 77 (113)
T 1ti3_A 25 SQKLIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE---------------------LKAVAEEWNV--- 77 (113)
T ss_dssp SSSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT---------------------CHHHHHHHHC---
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc---------------------cHHHHHhCCC---
Confidence 4666766666 8999999999999999887775 68888888753 3456677777
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 78 ---------~~~Pt~~~~-~~G~~ 91 (113)
T 1ti3_A 78 ---------EAMPTFIFL-KDGKL 91 (113)
T ss_dssp ---------SSTTEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-eCCEE
Confidence 357777776 57764
No 173
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.05 E-value=3.3e-10 Score=79.34 Aligned_cols=68 Identities=12% Similarity=0.217 Sum_probs=54.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||++|+...|.+.++.+++++ .+.++.|..|. +..+.+.|++
T Consensus 25 ~~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v--- 78 (287)
T 3qou_A 25 MTTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDA---------------------EQMIAAQFGL--- 78 (287)
T ss_dssp TTSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTT---------------------CHHHHHTTTC---
T ss_pred CCCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCcc---------------------CHHHHHHcCC---
Confidence 4677877777 99999999999999999988874 38888888763 2367888888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 79 ---------~~~Pt~~~~-~~G~~ 92 (287)
T 3qou_A 79 ---------RAIPTVYLF-QNGQP 92 (287)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CCCCeEEEE-ECCEE
Confidence 468898888 67865
No 174
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.04 E-value=5.3e-11 Score=74.84 Aligned_cols=72 Identities=11% Similarity=0.125 Sum_probs=52.4
Q ss_pred eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCC
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEK 111 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 111 (133)
+++|.|| ++||+.|+...|.+.++.++++ +.++.|..+..... ...|....+.+.|++
T Consensus 33 ~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~------------~~~d~~~~l~~~~~v------ 90 (135)
T 3emx_A 33 DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGE------------RELSAARLEMNKAGV------ 90 (135)
T ss_dssp SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCH------------HHHHHHHHHHHHHTC------
T ss_pred cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhh------------hhhhhhHHHHHHcCC------
Confidence 6666666 9999999999999999887764 88999987542211 111234677889999
Q ss_pred CCCCCCccceeEEEECCCCcc
Q 044272 112 DSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 112 ~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 91 ------~~~Pt~~~~~-~G~~ 104 (135)
T 3emx_A 91 ------EGTPTLVFYK-EGRI 104 (135)
T ss_dssp ------CSSSEEEEEE-TTEE
T ss_pred ------ceeCeEEEEc-CCEE
Confidence 4689776665 8875
No 175
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.04 E-value=9.1e-10 Score=66.71 Aligned_cols=67 Identities=7% Similarity=0.177 Sum_probs=51.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.+.++.++++ ++.++.|..+. ...+.+.|++
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~---------------------~~~~~~~~~v--- 77 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE---------------------VSEVTEKENI--- 77 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT---------------------THHHHHHTTC---
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC---------------------CHHHHHHcCC---
Confidence 4566777766 9999999999999999888775 58999888763 2367778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 78 ---------~~~Pt~~~~-~~G~~ 91 (112)
T 1syr_A 78 ---------TSMPTFKVY-KNGSS 91 (112)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcccEEEEE-ECCcE
Confidence 367876655 57765
No 176
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.03 E-value=7.9e-10 Score=69.76 Aligned_cols=68 Identities=7% Similarity=0.104 Sum_probs=52.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.++++++ +.++.|..|. +..+.+.|++
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~---------------------~~~l~~~~~v--- 76 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIAT---------------------NPWTAEKYGV--- 76 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTT---------------------CHHHHHHHTC---
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCc---------------------CHhHHHHCCC---
Confidence 4567777776 999999999999999999888753 8888888642 3457778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 77 ---------~~~Pt~~~~-~~G~~ 90 (140)
T 3hz4_A 77 ---------QGTPTFKFF-CHGRP 90 (140)
T ss_dssp ---------CEESEEEEE-ETTEE
T ss_pred ---------CcCCEEEEE-eCCcE
Confidence 468877777 67764
No 177
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.03 E-value=1.1e-09 Score=66.93 Aligned_cols=68 Identities=13% Similarity=0.188 Sum_probs=52.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||+.|+...+.+.++.+++++ ++.++.|..+. +..+.+.|++
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~---------------------~~~~~~~~~i--- 82 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDT---------------------NPETARNFQV--- 82 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCC---------------------CHHHHHhcCC---
Confidence 4567777766 89999999999999998888764 48898888763 3457778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 83 ---------~~~Pt~~~~-~~g~~ 96 (121)
T 2i1u_A 83 ---------VSIPTLILF-KDGQP 96 (121)
T ss_dssp ---------CSSSEEEEE-ETTEE
T ss_pred ---------CcCCEEEEE-ECCEE
Confidence 368887777 47765
No 178
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.02 E-value=2.1e-09 Score=73.77 Aligned_cols=69 Identities=10% Similarity=0.149 Sum_probs=54.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH--cCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK--REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~--~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+++++|.|| ++||++|+...|.+.++.+++++ .++.++.|..+. |.+..+.+.|++
T Consensus 29 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~-------------------~~~~~l~~~~~v- 87 (244)
T 3q6o_A 29 SRSAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE-------------------ETNSAVCRDFNI- 87 (244)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS-------------------TTTHHHHHHTTC-
T ss_pred CCCeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc-------------------hhhHHHHHHcCC-
Confidence 3466666666 99999999999999999999876 368888888642 235678888998
Q ss_pred CCCCCCCCCCCccceeEEEECCC
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPD 129 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~ 129 (133)
..+|+++++++.
T Consensus 88 -----------~~~Pt~~~~~~g 99 (244)
T 3q6o_A 88 -----------PGFPTVRFFXAF 99 (244)
T ss_dssp -----------CSSSEEEEECTT
T ss_pred -----------CccCEEEEEeCC
Confidence 468999999864
No 179
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.01 E-value=4.2e-10 Score=71.45 Aligned_cols=68 Identities=10% Similarity=0.112 Sum_probs=50.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...|.|.++.+++++ .+.++.|..|.. ..+.+.|++
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~---------------------~~~~~~~~i--- 75 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV---------------------PDFNKMYEL--- 75 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC---------------------CTTTTSSCS---
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC---------------------HHHHHHcCC---
Confidence 3667777776 99999999999999999888864 488888887621 234566777
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
...|++++++ +|++
T Consensus 76 ---------~~~Pt~~~~~-~G~~ 89 (142)
T 1qgv_A 76 ---------YDPCTVMFFF-RNKH 89 (142)
T ss_dssp ---------CSSCEEEEEE-TTEE
T ss_pred ---------CCCCEEEEEE-CCcE
Confidence 3688888774 5643
No 180
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.99 E-value=1.3e-09 Score=66.60 Aligned_cols=72 Identities=11% Similarity=0.184 Sum_probs=50.0
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|+|| ++||++|+...|.|.++.+++. ..++.+..+..... +....+.+.|++
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~---------------~~~~~~~~~~~i--- 85 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQL---------------NDLQAFRSRYGI--- 85 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGH---------------HHHHHHHHHHTC---
T ss_pred CCCeEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcH---------------HHHHHHHHHcCC---
Confidence 4566777766 9999999999999999877653 55666766532211 122356778888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 86 ---------~~~Pt~~~~~-~G~~ 99 (118)
T 1zma_A 86 ---------PTVPGFVHIT-DGQI 99 (118)
T ss_dssp ---------CSSCEEEEEE-TTEE
T ss_pred ---------CCCCeEEEEE-CCEE
Confidence 3688888884 7764
No 181
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.99 E-value=1.5e-09 Score=73.80 Aligned_cols=68 Identities=4% Similarity=0.111 Sum_probs=51.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcC--ceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKRE--VKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
++++++|.|| ++||+.|+...+.+.++.+++++.+ +.++.|..+ .+..+.+.|++
T Consensus 31 ~~~~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~---------------------~~~~l~~~~~v- 87 (241)
T 3idv_A 31 DKDTVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT---------------------SASVLASRFDV- 87 (241)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT---------------------TCHHHHHHTTC-
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc---------------------CCHHHHHhcCC-
Confidence 5666766666 9999999999999999999998665 777777664 23457777887
Q ss_pred CCCCCCCCCCCccceeEEEECCCCc
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPDHQ 131 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~G~ 131 (133)
..+|++++++ +|+
T Consensus 88 -----------~~~Pt~~~~~-~g~ 100 (241)
T 3idv_A 88 -----------SGYPTIKILK-KGQ 100 (241)
T ss_dssp -----------CSSSEEEEEE-TTE
T ss_pred -----------CcCCEEEEEc-CCC
Confidence 3578877775 443
No 182
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.98 E-value=9.6e-10 Score=66.08 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=50.0
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc--CceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR--EVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVD 107 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 107 (133)
+++++|.|| ++||+.|+...+.+.++.+.+.+. ++.++.|..+. +..+.+.|++
T Consensus 21 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---------------------~~~l~~~~~v-- 76 (111)
T 3uvt_A 21 EGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA---------------------ERNICSKYSV-- 76 (111)
T ss_dssp SSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT---------------------CHHHHHHTTC--
T ss_pred CCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc---------------------cHhHHHhcCC--
Confidence 566766666 899999999999999988776533 57777777642 3347777888
Q ss_pred CCCCCCCCCCccceeEEEECCCCcc
Q 044272 108 PDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 108 ~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 77 ----------~~~Pt~~~~-~~g~~ 90 (111)
T 3uvt_A 77 ----------RGYPTLLLF-RGGKK 90 (111)
T ss_dssp ----------CSSSEEEEE-ETTEE
T ss_pred ----------CcccEEEEE-eCCcE
Confidence 368887777 56654
No 183
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.98 E-value=7e-10 Score=75.26 Aligned_cols=68 Identities=12% Similarity=0.184 Sum_probs=52.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
++++++|.|| ++||+.|+...+.+.++.++++++ +.++.|..|. +..+.+.|++
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~---------------------~~~l~~~~~v--- 82 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ---------------------NPGTAPKYGI--- 82 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT---------------------CTTTGGGGTC---
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC---------------------CHHHHHHcCC---
Confidence 4567777776 999999999999999999888754 8898888753 2345567888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 83 ---------~~~Pt~~~~~-~G~~ 96 (222)
T 3dxb_A 83 ---------RGIPTLLLFK-NGEV 96 (222)
T ss_dssp ---------CSBSEEEEEE-TTEE
T ss_pred ---------CcCCEEEEEE-CCeE
Confidence 4688888874 7764
No 184
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.50 E-value=7.2e-11 Score=70.33 Aligned_cols=44 Identities=14% Similarity=0.259 Sum_probs=34.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD 74 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~ 74 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ ++.++.|..|.
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 61 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE 61 (106)
Confidence 4566666666 89999999999999998888864 47777777653
No 185
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.95 E-value=2.1e-09 Score=81.47 Aligned_cols=68 Identities=7% Similarity=0.119 Sum_probs=55.6
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH--cCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK--REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~--~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+++++|.|| ++||+.|+.+.|.+.++.+++++ .++.++.|..+. |.+..+.+.|+|
T Consensus 29 ~~k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~-------------------d~~~~l~~~~~V- 87 (519)
T 3t58_A 29 SSSAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE-------------------ETNSAVCREFNI- 87 (519)
T ss_dssp CSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS-------------------GGGHHHHHHTTC-
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc-------------------cccHHHHHHcCC-
Confidence 4466766666 99999999999999999999976 258888888763 345688899999
Q ss_pred CCCCCCCCCCCccceeEEEECC
Q 044272 107 DPDEKDSSGKQLPSRALHIVGP 128 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~ 128 (133)
..+|+++++++
T Consensus 88 -----------~~~PTl~~f~~ 98 (519)
T 3t58_A 88 -----------AGFPTVRFFQA 98 (519)
T ss_dssp -----------CSBSEEEEECT
T ss_pred -----------cccCEEEEEcC
Confidence 47999999987
No 186
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.94 E-value=3.6e-10 Score=68.74 Aligned_cols=69 Identities=7% Similarity=0.185 Sum_probs=50.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc--CceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR--EVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~--~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
++++++|.|| ++||+.|+...+.+.++.+.+++. ++.++.|..+. +..+.+.|++
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~~~~~~~v- 79 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE---------------------ESDLAQQYGV- 79 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT---------------------CCSSHHHHTC-
T ss_pred cCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC---------------------CHHHHHHCCC-
Confidence 4566666665 899999999999999998888754 36666665542 2356778888
Q ss_pred CCCCCCCCCCCccceeEEEECCCCcc
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 80 -----------~~~Pt~~~~-~~g~~ 93 (120)
T 1mek_A 80 -----------RGYPTIKFF-RNGDT 93 (120)
T ss_dssp -----------CSSSEEEEE-ESSCS
T ss_pred -----------CcccEEEEE-eCCCc
Confidence 468999988 56653
No 187
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.92 E-value=4.3e-09 Score=66.17 Aligned_cols=66 Identities=8% Similarity=0.124 Sum_probs=51.0
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCC
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDE 110 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 110 (133)
+.++|.|| ++||+.|+...+.|.++.+++.+ ++.++.|..|. +..+.+.|++
T Consensus 51 ~~vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v----- 102 (140)
T 1v98_A 51 PLTLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDE---------------------HPGLAARYGV----- 102 (140)
T ss_dssp CEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT---------------------CHHHHHHTTC-----
T ss_pred CCEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCC---------------------CHHHHHHCCC-----
Confidence 34555555 99999999999999999888864 48888888763 2357788888
Q ss_pred CCCCCCCccceeEEEECCCCcc
Q 044272 111 KDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 111 ~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 103 -------~~~Pt~~~~-~~G~~ 116 (140)
T 1v98_A 103 -------RSVPTLVLF-RRGAP 116 (140)
T ss_dssp -------CSSSEEEEE-ETTEE
T ss_pred -------CccCEEEEE-eCCcE
Confidence 368888888 68875
No 188
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.88 E-value=1.7e-09 Score=69.54 Aligned_cols=71 Identities=11% Similarity=0.015 Sum_probs=46.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc-CceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR-EVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVD 107 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 107 (133)
.+++++|.|| ++||+.|+...+.+.+. +++.+. +..++.|..|.. + ......|++
T Consensus 43 ~~KpVlV~F~-A~WC~~Ck~m~p~~~~~-~~~~~~~~~~fv~V~vD~e------------~--------~~~~~~~~v-- 98 (151)
T 3ph9_A 43 SKKPLMVIHH-LEDCQYSQALKKVFAQN-EEIQEMAQNKFIMLNLMHE------------T--------TDKNLSPDG-- 98 (151)
T ss_dssp HTCCEEEEEC-CTTCHHHHHHHHHHHHC-HHHHHHHHHTCEEEEESSC------------C--------SCGGGCTTC--
T ss_pred cCCcEEEEEE-CCCCHhHHHHHHHHhcC-HHHHHHhhcCeEEEEecCC------------c--------hhhHhhcCC--
Confidence 5678888877 99999999999999875 222211 234556666510 0 001234455
Q ss_pred CCCCCCCCCCccceeEEEECCCCccC
Q 044272 108 PDEKDSSGKQLPSRALHIVGPDHQVQ 133 (133)
Q Consensus 108 ~~~~~~~~~~~~~p~~~lid~~G~i~ 133 (133)
..+|+++++|++|+++
T Consensus 99 ----------~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 99 ----------QYVPRIMFVDPSLTVR 114 (151)
T ss_dssp ----------CCSSEEEEECTTSCBC
T ss_pred ----------CCCCEEEEECCCCCEE
Confidence 3699999999999874
No 189
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.87 E-value=3.3e-09 Score=66.63 Aligned_cols=63 Identities=14% Similarity=0.263 Sum_probs=47.6
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPD 109 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 109 (133)
+++++|.|| ++||+.|+...+.|.++.+++. ++.++.|..+... +.|++
T Consensus 30 ~~~vvv~f~-a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~------------------------~~~~i---- 78 (135)
T 2dbc_A 30 DLWVVIHLY-RSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCI------------------------EHYHD---- 78 (135)
T ss_dssp SCEEEEEEC-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSC------------------------SSCCS----
T ss_pred CCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCc------------------------ccCCC----
Confidence 356666666 9999999999999999887763 5888888776320 35666
Q ss_pred CCCCCCCCccceeEEEECCCCcc
Q 044272 110 EKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 110 ~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|++
T Consensus 79 --------~~~Pt~~~~~-~G~~ 92 (135)
T 2dbc_A 79 --------NCLPTIFVYK-NGQI 92 (135)
T ss_dssp --------SCCSEEEEES-SSSC
T ss_pred --------CCCCEEEEEE-CCEE
Confidence 4688988886 7875
No 190
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.87 E-value=2e-09 Score=66.57 Aligned_cols=68 Identities=12% Similarity=0.179 Sum_probs=49.5
Q ss_pred CCCeEEEEEeeCCCCc--------------hhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeC
Q 044272 29 GDNWTIIFSHPGDFTP--------------VCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIAD 94 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~--------------~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d 94 (133)
.+++++|.|| ++||+ .|+...+.+.++.+++++ ++.++.|..|.
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~-------------------- 77 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ-------------------- 77 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS--------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCC--------------------
Confidence 5667777776 99999 999999999999888875 38888888763
Q ss_pred CcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 95 PNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
+..+.+.|++ ..+|+++++ ++|++
T Consensus 78 -~~~l~~~~~v------------~~~Pt~~~~-~~G~~ 101 (123)
T 1oaz_A 78 -NPGTAPKYGI------------RGIPTLLLF-KNGEV 101 (123)
T ss_dssp -CTTTGGGGTC------------CBSSEEEEE-ESSSE
T ss_pred -CHHHHHHcCC------------CccCEEEEE-ECCEE
Confidence 2356678888 469999999 88875
No 191
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.86 E-value=4e-10 Score=69.76 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=34.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
.+++++|+|| ++||+.|+...+.|.++.+.++ ++.++.|..|
T Consensus 35 ~~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~ 76 (130)
T 1wmj_A 35 AGKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVD 76 (130)
T ss_dssp TTCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTT
T ss_pred cCCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEecc
Confidence 4667777766 9999999999999999888775 6888888775
No 192
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.85 E-value=1e-08 Score=72.55 Aligned_cols=68 Identities=12% Similarity=0.212 Sum_probs=53.2
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||++|+...|.+.++.+.+++. +.++.|..|. +.+..+++.|++
T Consensus 34 ~~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~-------------------~~~~~l~~~~~I--- 89 (298)
T 3ed3_A 34 TNYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL-------------------NKNKALCAKYDV--- 89 (298)
T ss_dssp SSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS-------------------TTTHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC-------------------ccCHHHHHhCCC---
Confidence 3556777766 999999999999999999888754 8899998872 125677888888
Q ss_pred CCCCCCCCCccceeEEEECCC
Q 044272 109 DEKDSSGKQLPSRALHIVGPD 129 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~ 129 (133)
..+|++++++++
T Consensus 90 ---------~~~Pt~~~~~~g 101 (298)
T 3ed3_A 90 ---------NGFPTLMVFRPP 101 (298)
T ss_dssp ---------CBSSEEEEEECC
T ss_pred ---------CccceEEEEECC
Confidence 468888888654
No 193
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.83 E-value=3.7e-09 Score=60.57 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=31.1
Q ss_pred EEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 34 IIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 34 vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
++.| +++||+.|+...+.+.++.+++.+ ++.++.|..|
T Consensus 5 vv~f-~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~ 42 (85)
T 1nho_A 5 IEVF-TSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIM 42 (85)
T ss_dssp EEEE-SCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTT
T ss_pred EEEE-ECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECC
Confidence 4555 499999999999999998887764 5888888875
No 194
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.81 E-value=6.5e-10 Score=67.31 Aligned_cols=38 Identities=11% Similarity=0.054 Sum_probs=29.9
Q ss_pred eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHH
Q 044272 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60 (133)
Q Consensus 21 ~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~ 60 (133)
.++|++. .++..+|.|| ++||+.|+...|.+.++.+++
T Consensus 4 ~~~la~~-~~k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 4 AVGLAAH-LRQIGGTMYG-AYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHHHHH-HHHHTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred hhHHHHh-cCCCEEEEEE-CCCCHHHHHHHHHHHHHHHhC
Confidence 3567776 5566777776 999999999999999887554
No 195
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.81 E-value=1e-08 Score=64.73 Aligned_cols=65 Identities=14% Similarity=0.296 Sum_probs=49.0
Q ss_pred eEEEEEeeCCCC--chhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCC
Q 044272 32 WTIIFSHPGDFT--PVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPD 109 (133)
Q Consensus 32 ~~vl~f~~~~~c--~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 109 (133)
+++|.|| ++|| +.|+...|-|.++.++|.++ ++++-|..| .+..++..||+
T Consensus 35 ~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvD---------------------e~~~la~~ygV---- 87 (137)
T 2qsi_A 35 IVVLFFR-GDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAE---------------------AERGLMARFGV---- 87 (137)
T ss_dssp EEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGG---------------------GHHHHHHHHTC----
T ss_pred cEEEEEe-CCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECC---------------------CCHHHHHHcCC----
Confidence 6666665 8899 99999999999999888643 777777665 34566777777
Q ss_pred CCCCCCCCccceeEEEECCCCcc
Q 044272 110 EKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 110 ~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+.+++ +||++
T Consensus 88 --------~siPTlilF-kdG~~ 101 (137)
T 2qsi_A 88 --------AVCPSLAVV-QPERT 101 (137)
T ss_dssp --------CSSSEEEEE-ECCEE
T ss_pred --------ccCCEEEEE-ECCEE
Confidence 467777777 56654
No 196
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.81 E-value=2.4e-08 Score=65.53 Aligned_cols=82 Identities=7% Similarity=-0.036 Sum_probs=52.8
Q ss_pred eecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhcCCCCceeeCCcH
Q 044272 22 FKLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDIEAYTPIIADPNR 97 (133)
Q Consensus 22 ~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~~~~~~~~~d~~~ 97 (133)
+..+.. .+++++|.|| ++||+.|+.+.+.. .++.+.+.+ ++.++.|..|. ++....|..
T Consensus 32 ~~~A~~-~~KpVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~-------------- 94 (173)
T 3ira_A 32 FEKARK-ENKPVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMT-------------- 94 (173)
T ss_dssp HHHHHH-HTCCEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHH--------------
T ss_pred HHHHHH-hCCCEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHH--------------
Confidence 444444 6788888887 99999999988742 333444443 47777777663 333333321
Q ss_pred HHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 98 EIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
.+...+|+ ..+|+++++|++|++
T Consensus 95 ~~q~~~gv------------~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 95 VCQIILGR------------GGWPLNIIMTPGKKP 117 (173)
T ss_dssp HHHHHHSC------------CCSSEEEEECTTSCE
T ss_pred HHHHHcCC------------CCCcceeeECCCCCc
Confidence 12233566 369999999999986
No 197
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.80 E-value=9.3e-09 Score=66.22 Aligned_cols=43 Identities=9% Similarity=0.090 Sum_probs=35.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
.++++||.|| ++||+.|+...|.|.++.++++++ +.++-|..|
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVD 82 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKMDELLYKVADDIKNF-CVIYLVDIT 82 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETT
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHccCC-cEEEEEECC
Confidence 4567777776 999999999999999999888643 777777775
No 198
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.79 E-value=5.1e-09 Score=59.97 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=31.8
Q ss_pred eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
..++.| +++||+.|+...+.|.++.+++.+ ++.++.|..|
T Consensus 4 ~~vv~f-~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~ 43 (85)
T 1fo5_A 4 VKIELF-TSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVM 43 (85)
T ss_dssp EEEEEE-ECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESS
T ss_pred eEEEEE-eCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECC
Confidence 345555 499999999999999998877753 5888888875
No 199
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.78 E-value=1.9e-08 Score=56.61 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=27.0
Q ss_pred EEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 34 IIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 34 vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
.|.|| ++||+.|+...+.+.++.+++.. ++.++.|.
T Consensus 3 ~v~f~-a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~ 38 (77)
T 1ilo_A 3 KIQIY-GTGCANCQMLEKNAREAVKELGI-DAEFEKIK 38 (77)
T ss_dssp EEEEE-CSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC
T ss_pred EEEEE-cCCChhHHHHHHHHHHHHHHcCC-ceEEEEec
Confidence 45666 77999999999999998777653 36666554
No 200
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.76 E-value=4.7e-09 Score=66.73 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=43.6
Q ss_pred eEEEEEeeCCC--CchhHHHHHHHHhhhhHHHHcCce--EEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCC
Q 044272 32 WTIIFSHPGDF--TPVCTTELGKMAAYVPEFDKREVK--LLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVD 107 (133)
Q Consensus 32 ~~vl~f~~~~~--c~~C~~~~~~l~~~~~~~~~~~v~--vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 107 (133)
.++|+|+ +.| |+.|+...|.|.++.+++ + ++. ++.|..|. +.++++.|++
T Consensus 36 ~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~---------------------~~~la~~~~V-- 89 (142)
T 2es7_A 36 DGVILLS-SDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQ---------------------SEAIGDRFNV-- 89 (142)
T ss_dssp SEEEEEC-CCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHH---------------------HHHHHHTTTC--
T ss_pred CEEEEEE-CCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCC---------------------CHHHHHhcCC--
Confidence 4556554 655 999999999999998888 3 577 88777652 2357788888
Q ss_pred CCCCCCCCCCccceeEEEECCCCcc
Q 044272 108 PDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 108 ~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 90 ----------~~iPT~~~f-k~G~~ 103 (142)
T 2es7_A 90 ----------RRFPATLVF-TDGKL 103 (142)
T ss_dssp ----------CSSSEEEEE-SCC--
T ss_pred ----------CcCCeEEEE-eCCEE
Confidence 468999999 78875
No 201
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.76 E-value=3e-08 Score=60.39 Aligned_cols=70 Identities=11% Similarity=0.233 Sum_probs=49.1
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPD 109 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 109 (133)
+++++++| +++||++|+...+.+.++.+. .++.++-|-.|....+ ...++..|||..
T Consensus 24 ~~~vvi~k-hatwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r~~-----------------Sn~IA~~~~V~h-- 80 (112)
T 3iv4_A 24 NKYVFVLK-HSETCPISANAYDQFNKFLYE---RDMDGYYLIVQQERDL-----------------SDYIAKKTNVKH-- 80 (112)
T ss_dssp CSEEEEEE-ECTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGHHH-----------------HHHHHHHHTCCC--
T ss_pred CCCEEEEE-ECCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCchh-----------------hHHHHHHhCCcc--
Confidence 45555554 599999999999999998663 3577777766522111 245788889931
Q ss_pred CCCCCCCCccceeEEEECCCCcc
Q 044272 110 EKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 110 ~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..|+.+++ +||++
T Consensus 81 ---------~sPq~il~-k~G~~ 93 (112)
T 3iv4_A 81 ---------ESPQAFYF-VNGEM 93 (112)
T ss_dssp ---------CSSEEEEE-ETTEE
T ss_pred ---------CCCeEEEE-ECCEE
Confidence 38999998 67765
No 202
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.74 E-value=5.1e-08 Score=67.06 Aligned_cols=44 Identities=11% Similarity=-0.068 Sum_probs=33.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH---cCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK---REVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~---~~v~vv~is~d 73 (133)
.++..++.|| ++||++|+...+.+.++...+.+ .++.+..|..+
T Consensus 137 ~~~~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~ 183 (243)
T 2hls_A 137 KGRVHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY 183 (243)
T ss_dssp CSCEEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred CCCcEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc
Confidence 4554555555 99999999999999999888842 46777777654
No 203
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.73 E-value=4.3e-08 Score=66.10 Aligned_cols=67 Identities=13% Similarity=0.054 Sum_probs=50.4
Q ss_pred CeE-EEEEeeCCCCchhHHHHHHHHhhhhHHHH---cCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 31 NWT-IIFSHPGDFTPVCTTELGKMAAYVPEFDK---REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 31 ~~~-vl~f~~~~~c~~C~~~~~~l~~~~~~~~~---~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
+++ ++.|| ++||++|+...+.+.++.+.+.+ .++.++.|..+ .+..+.+.|++
T Consensus 134 ~~~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~---------------------~~~~l~~~~~v- 190 (226)
T 1a8l_A 134 QDVRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI---------------------EYPEWADQYNV- 190 (226)
T ss_dssp SCEEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG---------------------GCHHHHHHTTC-
T ss_pred CCcEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc---------------------cCHHHHHhCCC-
Confidence 456 55655 99999999999999999988874 35778777664 23467788888
Q ss_pred CCCCCCCCCCCccceeEEEECCCCcc
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 191 -----------~~~Pt~~~~-~~G~~ 204 (226)
T 1a8l_A 191 -----------MAVPKIVIQ-VNGED 204 (226)
T ss_dssp -----------CSSCEEEEE-ETTEE
T ss_pred -----------cccCeEEEE-eCCce
Confidence 468887766 57754
No 204
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.71 E-value=1.1e-08 Score=64.70 Aligned_cols=69 Identities=10% Similarity=0.066 Sum_probs=48.8
Q ss_pred CCCeEEEEEeeCCC--CchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDF--TPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~--c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+++++|+| ++.| |+.|+...|-|.++.++|.++.++++-|..| .+.+++..|||
T Consensus 33 ~~~~vlVdF-~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD---------------------e~~~lA~~ygV- 89 (140)
T 2qgv_A 33 QAPDGVVLL-SSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE---------------------QSEAIGDRFGA- 89 (140)
T ss_dssp TCSSEEEEE-CCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH---------------------HHHHHHHHHTC-
T ss_pred CCCCEEEEE-eCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC---------------------CCHHHHHHcCC-
Confidence 445676655 5887 9999999999999999886433777666654 23456677777
Q ss_pred CCCCCCCCCCCccceeEEEECCCCcc
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+.+++ +||++
T Consensus 90 -----------~sIPTlilF-k~G~~ 103 (140)
T 2qgv_A 90 -----------FRFPATLVF-TGGNY 103 (140)
T ss_dssp -----------CSSSEEEEE-ETTEE
T ss_pred -----------ccCCEEEEE-ECCEE
Confidence 457777777 56654
No 205
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.71 E-value=6.5e-09 Score=71.77 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
+++++||.|| ++||+.|+...|.|.++.+.+. ++.++.|..+
T Consensus 132 ~~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d 173 (245)
T 1a0r_P 132 KITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKAS 173 (245)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHH
T ss_pred CCCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 3567777766 9999999999999999988875 5888888764
No 206
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.65 E-value=5.1e-08 Score=72.88 Aligned_cols=66 Identities=9% Similarity=0.149 Sum_probs=51.1
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc-C------ceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHc
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR-E------VKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQL 103 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~------v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 103 (133)
++++|.|| ++||++|+.+.|.+.++.+++++. + +.++.|..|. +..+.+.|
T Consensus 43 k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~---------------------~~~la~~y 100 (470)
T 3qcp_A 43 CPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS---------------------EVDLCRKY 100 (470)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT---------------------CHHHHHHT
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC---------------------CHHHHHHc
Confidence 56777776 999999999999999999888633 2 7888887652 34677788
Q ss_pred CCCCCCCCCCCCCCccceeEEEECCCC
Q 044272 104 NMVDPDEKDSSGKQLPSRALHIVGPDH 130 (133)
Q Consensus 104 ~~~~~~~~~~~~~~~~~p~~~lid~~G 130 (133)
+| ..+|++++++++|
T Consensus 101 ~V------------~~~PTlilf~~gg 115 (470)
T 3qcp_A 101 DI------------NFVPRLFFFYPRD 115 (470)
T ss_dssp TC------------CSSCEEEEEEESS
T ss_pred CC------------CccCeEEEEECCC
Confidence 88 4688888886655
No 207
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.62 E-value=1.6e-07 Score=63.75 Aligned_cols=68 Identities=12% Similarity=0.194 Sum_probs=50.6
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcC--ceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKRE--VKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.++.++|.|| ++||+.|+...+.+.++.+++.+++ +.++.|..+. +..+.+.|++
T Consensus 146 ~~~~~~v~f~-a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~---------------------~~~l~~~~~v- 202 (241)
T 3idv_A 146 DADIILVEFY-APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA---------------------ETDLAKRFDV- 202 (241)
T ss_dssp HCSEEEEEEE-CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT---------------------CHHHHHHTTC-
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC---------------------CHHHHHHcCC-
Confidence 3456666665 9999999999999999999987654 7787777653 3457778888
Q ss_pred CCCCCCCCCCCccceeEEEECCCCc
Q 044272 107 DPDEKDSSGKQLPSRALHIVGPDHQ 131 (133)
Q Consensus 107 ~~~~~~~~~~~~~~p~~~lid~~G~ 131 (133)
...|++++++ +|+
T Consensus 203 -----------~~~Pt~~~~~-~g~ 215 (241)
T 3idv_A 203 -----------SGYPTLKIFR-KGR 215 (241)
T ss_dssp -----------CSSSEEEEEE-TTE
T ss_pred -----------cccCEEEEEE-CCe
Confidence 3578877775 454
No 208
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.62 E-value=4.1e-08 Score=73.33 Aligned_cols=69 Identities=6% Similarity=0.064 Sum_probs=51.6
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc-CceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR-EVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVD 107 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 107 (133)
.++.++|.|| ++||++|+...|.+.++.+.+++. ++.++.|..+.. .+.+.|++
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~----------------------~~~~~~~v-- 423 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN----------------------DVPSPYEV-- 423 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS----------------------CCCTTCCC--
T ss_pred CCCcEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch----------------------hhHhhCCC--
Confidence 4667777766 999999999999999999988764 566766666431 12345666
Q ss_pred CCCCCCCCCCccceeEEEECCCCcc
Q 044272 108 PDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 108 ~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
...|++++++++|++
T Consensus 424 ----------~~~Pt~~~~~~~~~~ 438 (481)
T 3f8u_A 424 ----------RGFPTIYFSPANKKL 438 (481)
T ss_dssp ----------CSSSEEEEECTTCTT
T ss_pred ----------cccCEEEEEeCCCeE
Confidence 368999999888763
No 209
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.59 E-value=1.6e-07 Score=68.47 Aligned_cols=68 Identities=9% Similarity=0.155 Sum_probs=48.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHH-----cCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHc
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDK-----REVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQL 103 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~-----~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 103 (133)
.+++++|.|| ++||++|+...|.+.++.+.+++ .++.++.|..+ ....+++.|
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~---------------------~~~~l~~~~ 78 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD---------------------QHSDIAQRY 78 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT---------------------TCHHHHHHT
T ss_pred cCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC---------------------ccHHHHHhc
Confidence 4566666665 99999999999999999888853 23777777754 345667777
Q ss_pred CCCCCCCCCCCCCCccceeEEEECCCCc
Q 044272 104 NMVDPDEKDSSGKQLPSRALHIVGPDHQ 131 (133)
Q Consensus 104 ~~~~~~~~~~~~~~~~~p~~~lid~~G~ 131 (133)
++ ...|+++++ ++|+
T Consensus 79 ~v------------~~~Pt~~~f-~~G~ 93 (382)
T 2r2j_A 79 RI------------SKYPTLKLF-RNGM 93 (382)
T ss_dssp TC------------CEESEEEEE-ETTE
T ss_pred CC------------CcCCEEEEE-eCCc
Confidence 77 356776665 3554
No 210
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.59 E-value=1.1e-07 Score=68.38 Aligned_cols=44 Identities=2% Similarity=0.138 Sum_probs=33.2
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHH-------HHhhhhHHHHcCceEEEEeCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGK-------MAAYVPEFDKREVKLLGLSCDD 74 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~-------l~~~~~~~~~~~v~vv~is~d~ 74 (133)
.+++++|.|| ++||+ |+..+|. +.++.+.+++.++.++.|..+.
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~ 77 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK 77 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT
T ss_pred hCCeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC
Confidence 4456666665 99999 9888888 7777777766578888887653
No 211
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.57 E-value=2.3e-07 Score=69.68 Aligned_cols=65 Identities=11% Similarity=0.227 Sum_probs=49.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||++|+...|.+.++.+.+++.++.++.|..+. ...+.+.||+
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~---------------------~~~l~~~~~v--- 84 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE---------------------NQDLCMEHNI--- 84 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred cCCeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC---------------------CHHHHHhcCC---
Confidence 4556666665 99999999999999999988876678888887542 3457777777
Q ss_pred CCCCCCCCCccceeEEEEC
Q 044272 109 DEKDSSGKQLPSRALHIVG 127 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid 127 (133)
..+|+++++.
T Consensus 85 ---------~~~Pt~~~~~ 94 (504)
T 2b5e_A 85 ---------PGFPSLKIFK 94 (504)
T ss_dssp ---------CSSSEEEEEE
T ss_pred ---------CcCCEEEEEe
Confidence 3577777774
No 212
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.53 E-value=5.5e-08 Score=65.91 Aligned_cols=42 Identities=12% Similarity=0.098 Sum_probs=34.2
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
++++++|.|| ++||+.|+...+.|.++.+.+. ++.++.|..+
T Consensus 119 ~~k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~ 160 (217)
T 2trc_P 119 KVTTIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS 160 (217)
T ss_dssp TTCEEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH
T ss_pred CCcEEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 3467777766 9999999999999999988874 6888888764
No 213
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.51 E-value=2.9e-07 Score=62.21 Aligned_cols=41 Identities=7% Similarity=-0.071 Sum_probs=31.3
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
+++++..|+++||++|+...+.+.++..++. ++.++.|..+
T Consensus 136 ~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~ 176 (229)
T 2ywm_A 136 IPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDAS 176 (229)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGG
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECC
Confidence 4554444449999999999999999887762 6888877764
No 214
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.51 E-value=1.1e-07 Score=58.59 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=33.7
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
+++++.|| ++||+.|+...|.|.++.+++. +++++-|..|
T Consensus 24 ~~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d 63 (118)
T 3evi_A 24 VWVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVN 63 (118)
T ss_dssp CEEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGG
T ss_pred CeEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhH
Confidence 36777766 9999999999999999988875 5888888876
No 215
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.49 E-value=2.5e-07 Score=60.11 Aligned_cols=47 Identities=15% Similarity=0.129 Sum_probs=32.4
Q ss_pred eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 21 ~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
...+.+. .++.+|+.|| ..|||+|....+.|.++.+++.+ ++++.+.
T Consensus 14 ~~~~G~~-~a~v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~ 60 (175)
T 3gyk_A 14 APVLGNP-EGDVTVVEFF-DYNCPYCRRAMAEVQGLVDADPN--VRLVYRE 60 (175)
T ss_dssp SCEEECT-TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--EEEEEEE
T ss_pred CCCcCCC-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHhCCC--EEEEEEe
Confidence 4555554 5555555554 88999999999999998776543 5555443
No 216
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.46 E-value=3.9e-07 Score=71.75 Aligned_cols=68 Identities=4% Similarity=0.059 Sum_probs=52.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDP 108 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 108 (133)
.+++++|.|| ++||+.|+...+.+.++.+++++ ++.++.|..+. ...+.+.|++
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~---------------------~~~~~~~~~v--- 727 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQA---------------------YPQTCQKAGI--- 727 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT---------------------CHHHHHHTTC---
T ss_pred CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCC---------------------CHHHHHhcCC---
Confidence 4567777776 99999999999999999888865 48888887753 3356777888
Q ss_pred CCCCCCCCCccceeEEEECCCCcc
Q 044272 109 DEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 109 ~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|+++++ ++|++
T Consensus 728 ---------~~~Pt~~~~-~~g~~ 741 (780)
T 3apo_A 728 ---------KAYPSVKLY-QYERA 741 (780)
T ss_dssp ---------CSSSEEEEE-EEETT
T ss_pred ---------CcCCEEEEE-cCCCc
Confidence 358888888 66654
No 217
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.44 E-value=4.3e-07 Score=61.30 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=28.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~ 72 (133)
+++++++.|| ..|||+|+...+.|.++.+ .+++++.+..
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~ 123 (216)
T 1eej_A 85 QEKHVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLAF 123 (216)
T ss_dssp TCCEEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEEC
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEEC
Confidence 4556666665 9999999999999887643 3688776643
No 218
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.44 E-value=6e-07 Score=66.99 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=48.4
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCC
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDE 110 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 110 (133)
++++|.|| ++||++|+...|.+.++.+.+++. +.++.|..+. ...+++.||+
T Consensus 22 ~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~---------------------~~~l~~~~~v----- 73 (481)
T 3f8u_A 22 GLMLVEFF-APWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA---------------------NTNTCNKYGV----- 73 (481)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT---------------------CHHHHHHTTC-----
T ss_pred CeEEEEEE-CCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC---------------------CHHHHHhcCC-----
Confidence 56666655 999999999999999999888765 8888887753 3456677777
Q ss_pred CCCCCCCccceeEEEECCCCc
Q 044272 111 KDSSGKQLPSRALHIVGPDHQ 131 (133)
Q Consensus 111 ~~~~~~~~~~p~~~lid~~G~ 131 (133)
..+|+++++ ++|+
T Consensus 74 -------~~~Ptl~~~-~~g~ 86 (481)
T 3f8u_A 74 -------SGYPTLKIF-RDGE 86 (481)
T ss_dssp -------CEESEEEEE-ETTE
T ss_pred -------CCCCEEEEE-eCCc
Confidence 357776666 4553
No 219
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.42 E-value=5.2e-07 Score=71.09 Aligned_cols=44 Identities=11% Similarity=0.098 Sum_probs=37.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD 74 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~ 74 (133)
.+++++|.|| ++||+.|+..++.+.++.+++++ ++.++.|..+.
T Consensus 454 ~~~~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~ 497 (780)
T 3apo_A 454 DKEPWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTI 497 (780)
T ss_dssp CCSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT
T ss_pred CCCeEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCC
Confidence 5677777776 89999999999999999998874 48888888763
No 220
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.41 E-value=2.3e-06 Score=56.22 Aligned_cols=44 Identities=7% Similarity=0.053 Sum_probs=31.6
Q ss_pred CCeEEEEEeeC------CCCchhHHHHHHHHhhhhHHHH----cCceEEEEeCC
Q 044272 30 DNWTIIFSHPG------DFTPVCTTELGKMAAYVPEFDK----REVKLLGLSCD 73 (133)
Q Consensus 30 ~~~~vl~f~~~------~~c~~C~~~~~~l~~~~~~~~~----~~v~vv~is~d 73 (133)
+.++||.||.. .||+.|+...|.+.++.+++.. ..+.+.-|..|
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d 90 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN 90 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc
Confidence 34566666631 5999999999999999999862 23556555555
No 221
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.35 E-value=5.6e-07 Score=64.75 Aligned_cols=44 Identities=2% Similarity=0.022 Sum_probs=33.5
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc-CceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR-EVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~v~vv~is~d 73 (133)
.++.++|.|| ++||++|+...|.+.++.+.+++. ++.++.|..+
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred CCCcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 4566666666 999999999999999999988754 4555555443
No 222
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.35 E-value=2.6e-06 Score=54.66 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=46.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNM 105 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (133)
.+|+++|+|+ +.||..|+..-... .++.+.+. .++.++-+..++++ ...+.+.|++
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~-~~fv~v~~d~~~~~-------------------~~~l~~~y~v 99 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIR-EHFIFWQVYHDSEE-------------------GQRYIQFYKL 99 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHH-HTEEEEEEESSSHH-------------------HHHHHHHHTC
T ss_pred cCCeEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHH-cCeEEEEEecCCHh-------------------HHHHHHHcCC
Confidence 4688888877 89999999987655 23333332 24666666665422 2234467777
Q ss_pred CCCCCCCCCCCCccceeEEEECCC-Cc
Q 044272 106 VDPDEKDSSGKQLPSRALHIVGPD-HQ 131 (133)
Q Consensus 106 ~~~~~~~~~~~~~~~p~~~lid~~-G~ 131 (133)
...|+++++|++ |+
T Consensus 100 ------------~~~P~~~fld~~~G~ 114 (153)
T 2dlx_A 100 ------------GDFPYVSILDPRTGQ 114 (153)
T ss_dssp ------------CSSSEEEEECTTTCC
T ss_pred ------------CCCCEEEEEeCCCCc
Confidence 358899999998 74
No 223
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.34 E-value=2.3e-07 Score=69.67 Aligned_cols=43 Identities=7% Similarity=0.119 Sum_probs=33.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc--CceEEEEeC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR--EVKLLGLSC 72 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~--~v~vv~is~ 72 (133)
.+++++|.|| ++||++|+...|.+.++.+.++.. ++.++.|..
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~ 419 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDH 419 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEG
T ss_pred CCCCEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecC
Confidence 4667777776 999999999999999999988733 455555544
No 224
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.33 E-value=1.5e-06 Score=57.47 Aligned_cols=43 Identities=9% Similarity=0.085 Sum_probs=32.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
+++++|+.|| ..|||+|....+.+.++.+++.+ ++.+.-+..+
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 4555666665 88999999999999998887765 4777776653
No 225
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.21 E-value=5.8e-07 Score=55.12 Aligned_cols=71 Identities=10% Similarity=0.027 Sum_probs=43.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHH-HcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFD-KREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQLNMVD 107 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~-~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 107 (133)
+.+.++|.|| +.||+.|+..-+.+...++... .+.+.++-|..+.. ....++..|++
T Consensus 17 ~~~~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~-------------------~~~~la~~~~V-- 74 (116)
T 3dml_A 17 KAELRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDP-------------------LPPGLELARPV-- 74 (116)
T ss_dssp --CEEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSC-------------------CCTTCBCSSCC--
T ss_pred cCCCEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCC-------------------CchhHHHHCCC--
Confidence 3345666666 9999999999877765543321 11355666665521 01223345566
Q ss_pred CCCCCCCCCCccceeEEEECCCCcc
Q 044272 108 PDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 108 ~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
..+|++++++ +|+.
T Consensus 75 ----------~g~PT~i~f~-~G~e 88 (116)
T 3dml_A 75 ----------TFTPTFVLMA-GDVE 88 (116)
T ss_dssp ----------CSSSEEEEEE-TTEE
T ss_pred ----------CCCCEEEEEE-CCEE
Confidence 4689999998 8864
No 226
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.21 E-value=1.8e-06 Score=49.02 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=24.2
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
|+++|||.|+...+.|.++.+++ ++.+..+..|
T Consensus 7 f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 7 FYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred EeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 44899999999999998876553 4555555554
No 227
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.18 E-value=1.8e-06 Score=56.94 Aligned_cols=41 Identities=10% Similarity=0.011 Sum_probs=29.6
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~ 72 (133)
++.+|+.|| ..+||+|....+.|.++.+++.. .+.+..+..
T Consensus 22 ~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 22 GKIEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSEEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCcEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 455555554 88899999999999988877754 466665553
No 228
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.16 E-value=2.7e-06 Score=51.43 Aligned_cols=38 Identities=8% Similarity=0.060 Sum_probs=25.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
+++++++ | +++||+.|+...+.|.++... ..++-|..+
T Consensus 18 ~~~~vv~-f-~a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~ 55 (116)
T 2e7p_A 18 SSAPVVV-F-SKTYCGYCNRVKQLLTQVGAS-----YKVVELDEL 55 (116)
T ss_dssp TSSSEEE-E-ECTTCHHHHHHHHHHHHHTCC-----CEEEEGGGS
T ss_pred cCCCEEE-E-ECCCChhHHHHHHHHHHcCCC-----eEEEEccCC
Confidence 4555544 5 499999999999988876432 345555444
No 229
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.12 E-value=7.4e-06 Score=53.89 Aligned_cols=41 Identities=10% Similarity=0.117 Sum_probs=29.6
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
.++.+|+.|| ..|||+|....+.|.++.+++.+ ++.+.-+.
T Consensus 24 ~~~~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (192)
T 3h93_A 24 PGKIEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLP 64 (192)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEE
T ss_pred CCCCEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEe
Confidence 3455555555 88899999999999988777765 46655443
No 230
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.04 E-value=3.5e-05 Score=49.81 Aligned_cols=51 Identities=10% Similarity=0.025 Sum_probs=35.2
Q ss_pred CeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc-CceEEEEeC
Q 044272 20 GNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR-EVKLLGLSC 72 (133)
Q Consensus 20 G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~v~vv~is~ 72 (133)
+.+.+.+. .++.+|+.| +..+||+|....+.+.++.+++.+. .++++....
T Consensus 18 ~~~~~G~~-~a~v~i~~f-~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 18 TGLHIGES-NAPVKMIEF-INVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SSEEESCT-TCSEEEEEE-ECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CCcccCCC-CCCeEEEEE-ECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 34556554 455455554 4778999999999999988888433 477776554
No 231
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.01 E-value=2.6e-05 Score=52.52 Aligned_cols=42 Identities=14% Similarity=-0.086 Sum_probs=30.8
Q ss_pred CeEEEEEe----eCCCCchhHHHHHHHHhhhhHHHH-cCceEEEEeC
Q 044272 31 NWTIIFSH----PGDFTPVCTTELGKMAAYVPEFDK-REVKLLGLSC 72 (133)
Q Consensus 31 ~~~vl~f~----~~~~c~~C~~~~~~l~~~~~~~~~-~~v~vv~is~ 72 (133)
++++|.|| |+.||++|+..++.+.++.+++.+ ..+++..|..
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~ 67 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSP 67 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECT
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecC
Confidence 46777766 478899999999999998777743 2477766633
No 232
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.01 E-value=2.2e-05 Score=52.67 Aligned_cols=41 Identities=5% Similarity=-0.049 Sum_probs=30.7
Q ss_pred eEEEEEeeCC-CCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC
Q 044272 32 WTIIFSHPGD-FTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD 74 (133)
Q Consensus 32 ~~vl~f~~~~-~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~ 74 (133)
+++|.+|++. ||++|+...+.+.++.+. . .++.++.|..|.
T Consensus 23 ~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~-~~v~~~~vd~~~ 64 (226)
T 1a8l_A 23 PVKLIVFVRKDHCQYCDQLKQLVQELSEL-T-DKLSYEIVDFDT 64 (226)
T ss_dssp CEEEEEEECSSSCTTHHHHHHHHHHHHTT-C-TTEEEEEEETTS
T ss_pred CeEEEEEecCCCCchhHHHHHHHHHHHhh-C-CceEEEEEeCCC
Confidence 4555555688 999999999999987643 2 358888888775
No 233
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.00 E-value=1.8e-05 Score=53.18 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=26.0
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
++.+++.|+ ..|||+|+...+.|.++. +.++++..+.
T Consensus 86 ~k~~vv~F~-d~~Cp~C~~~~~~l~~~~----~~~v~v~~~~ 122 (211)
T 1t3b_A 86 EKHVVTVFM-DITCHYCHLLHQQLKEYN----DLGITVRYLA 122 (211)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHTTHHHHH----HTTEEEEEEE
T ss_pred CCEEEEEEE-CCCCHhHHHHHHHHHHHH----hCCcEEEEEE
Confidence 445555555 889999999999988743 2367766543
No 234
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.97 E-value=3e-05 Score=56.14 Aligned_cols=45 Identities=4% Similarity=-0.071 Sum_probs=29.2
Q ss_pred CCCeEEEEEeeCCCCchhHHHH------HHHHhhhhHHHHcCceEEEEeCCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTEL------GKMAAYVPEFDKREVKLLGLSCDD 74 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~------~~l~~~~~~~~~~~v~vv~is~d~ 74 (133)
.++.++|.|| ++||++|...- +.+.++...++..++.+..|..+.
T Consensus 29 ~~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~ 79 (367)
T 3us3_A 29 KYEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK 79 (367)
T ss_dssp HCSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT
T ss_pred hCCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc
Confidence 3455666665 99999974332 456666666665567777777653
No 235
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.92 E-value=2.7e-05 Score=51.06 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=27.9
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
+.+++. |+..+||+|....+.+.++.+++.. .+.+..+.
T Consensus 26 ~v~i~~-f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p 64 (193)
T 2rem_A 26 KIEVVE-IFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVP 64 (193)
T ss_dssp CEEEEE-EECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEE
T ss_pred CeEEEE-EECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeC
Confidence 334445 4578899999999999988777653 46665554
No 236
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.86 E-value=5.3e-05 Score=51.83 Aligned_cols=39 Identities=18% Similarity=0.252 Sum_probs=26.3
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
.++.+|+.| +..|||+|+...+.+.++.+. .++++..+.
T Consensus 96 ~ak~~v~~F-~D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~ 134 (241)
T 1v58_A 96 DAPVIVYVF-ADPFCPYCKQFWQQARPWVDS---GKVQLRTLL 134 (241)
T ss_dssp TCSEEEEEE-ECTTCHHHHHHHHHHHHHHHT---TSEEEEEEE
T ss_pred CCCeEEEEE-ECCCChhHHHHHHHHHHHHhC---CcEEEEEEE
Confidence 344455555 488899999999998875543 247765544
No 237
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.83 E-value=5.5e-05 Score=57.21 Aligned_cols=40 Identities=5% Similarity=-0.153 Sum_probs=30.7
Q ss_pred eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
++.+.+|++.||++|+...+.+.++...+. ++.+..|..|
T Consensus 118 ~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~ 157 (521)
T 1hyu_A 118 DFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGG 157 (521)
T ss_dssp CEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETT
T ss_pred CcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEech
Confidence 455555669999999999999998866654 5777777765
No 238
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.83 E-value=4e-05 Score=43.49 Aligned_cols=35 Identities=9% Similarity=0.009 Sum_probs=27.0
Q ss_pred EeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 37 SHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
.|+++|||.|....+.|.++..++ .++.+..|..+
T Consensus 5 ~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vdi~ 39 (85)
T 1ego_A 5 IFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVDIR 39 (85)
T ss_dssp EECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEECHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEecc
Confidence 345899999999999999876654 36887777654
No 239
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.66 E-value=0.00013 Score=45.13 Aligned_cols=42 Identities=2% Similarity=-0.145 Sum_probs=32.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
.+.++++.|| +. |..|+...+.|.++.++++.+ +.++-|..|
T Consensus 22 ~~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d 63 (133)
T 2djk_A 22 AGIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDAK 63 (133)
T ss_dssp TTSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTT
T ss_pred CCCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchH
Confidence 3456766666 77 788999999999998888654 777777765
No 240
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.54 E-value=0.00011 Score=42.52 Aligned_cols=22 Identities=14% Similarity=0.125 Sum_probs=17.9
Q ss_pred EeeCCCCchhHHHHHHHHhhhh
Q 044272 37 SHPGDFTPVCTTELGKMAAYVP 58 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~~~~ 58 (133)
.|+++||+.|....+-|.++..
T Consensus 5 ~f~a~~C~~C~~~~~~L~~~~~ 26 (87)
T 1ttz_A 5 LYQRDDCHLCDQAVEALAQARA 26 (87)
T ss_dssp EEECSSCHHHHHHHHHHHHTTC
T ss_pred EEECCCCchHHHHHHHHHHHHH
Confidence 3459999999999999887643
No 241
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.53 E-value=0.00016 Score=42.71 Aligned_cols=56 Identities=11% Similarity=0.189 Sum_probs=35.9
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCcee
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPII 92 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~ 92 (133)
..+.+++| ++.||+.|....+.|.++.+ ++.+.-|..|+++ ..+++++++...|.+
T Consensus 15 ~~~~v~~f-~~~~C~~C~~~~~~L~~l~~-----~i~~~~vdi~~~~-~~el~~~~g~~vP~l 70 (100)
T 1wjk_A 15 ALPVLTLF-TKAPCPLCDEAKEVLQPYKD-----RFILQEVDITLPE-NSTWYERYKFDIPVF 70 (100)
T ss_dssp CCCEEEEE-ECSSCHHHHHHHHHTSTTSS-----SSEEEEEETTSST-THHHHHHSSSSCSEE
T ss_pred CCCEEEEE-eCCCCcchHHHHHHHHHhhh-----CCeEEEEECCCcc-hHHHHHHHCCCCCEE
Confidence 34455555 58999999999998886542 4788778876322 145566666222544
No 242
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.47 E-value=0.0004 Score=38.89 Aligned_cols=49 Identities=12% Similarity=0.118 Sum_probs=30.8
Q ss_pred EeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC-cee
Q 044272 37 SHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT-PII 92 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~-~~~ 92 (133)
.|+++|||.|+...+.|.+. ++.+..+..+......++..+++... |.+
T Consensus 5 ~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~ 54 (81)
T 1h75_A 5 IYTRNDCVQCHATKRAMENR-------GFDFEMINVDRVPEAAEALRAQGFRQLPVV 54 (81)
T ss_dssp EEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTCHHHHHHHHHTTCCSSCEE
T ss_pred EEcCCCChhHHHHHHHHHHC-------CCCeEEEECCCCHHHHHHHHHhCCCccCEE
Confidence 34589999999988877653 67777777764333334444444433 444
No 243
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.25 E-value=0.001 Score=36.42 Aligned_cols=50 Identities=6% Similarity=0.074 Sum_probs=30.8
Q ss_pred EeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC-ceee
Q 044272 37 SHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT-PIIA 93 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~-~~~~ 93 (133)
+|++.||+.|+...+.|.++ |+.+..+..+......++.++++... |.+.
T Consensus 5 ~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~ 55 (75)
T 1r7h_A 5 LYTKPACVQCTATKKALDRA-------GLAYNTVDISLDDEARDYVMALGYVQAPVVE 55 (75)
T ss_dssp EEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEE
T ss_pred EEeCCCChHHHHHHHHHHHc-------CCCcEEEECCCCHHHHHHHHHcCCCccCEEE
Confidence 34588999999988887754 57766677764333334444444332 4443
No 244
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.23 E-value=0.0016 Score=46.60 Aligned_cols=40 Identities=13% Similarity=0.147 Sum_probs=31.6
Q ss_pred EEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 33 TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 33 ~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
.++++|++.||+.|....+.+.++.++++.+ +.++.|..+
T Consensus 137 ~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~ 176 (361)
T 3uem_A 137 THILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD 176 (361)
T ss_dssp EEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT
T ss_pred cEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC
Confidence 4344445889999999999999999999855 777777765
No 245
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.17 E-value=0.00069 Score=40.70 Aligned_cols=52 Identities=8% Similarity=0.106 Sum_probs=34.2
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCcee
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPII 92 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~ 92 (133)
|..|++.||+.|....+-|.++.+++ ++.+.-|..|.... .+++++...|.+
T Consensus 32 vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~d~~---l~~~ygv~VP~l 83 (107)
T 2fgx_A 32 LVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINIDGNEH---LTRLYNDRVPVL 83 (107)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTTCHH---HHHHSTTSCSEE
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECCCCHH---HHHHhCCCCceE
Confidence 44445899999999999998876553 57777777763222 333444444544
No 246
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.07 E-value=0.00053 Score=48.30 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=26.4
Q ss_pred eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHH
Q 044272 21 NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEF 60 (133)
Q Consensus 21 ~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~ 60 (133)
.+.+++..+ +..++.|| ++|||+|+...|.+.++.+++
T Consensus 189 ~~~la~~l~-~~~vV~F~-A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLR-QIGGTMYG-AYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHH-HTTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhC-CCCEEEEE-CCCCHHHHHHHHHHHHHHHHc
Confidence 366655433 22345555 999999999999999876443
No 247
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.02 E-value=0.0041 Score=35.39 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=28.4
Q ss_pred EeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhc
Q 044272 37 SHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDI 85 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~ 85 (133)
+|.++|||.|+...+-|.+. ++.+..+..+ ++...++.+.+
T Consensus 10 ~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv~-~~~~~~l~~~~ 50 (89)
T 2klx_A 10 LYTRPNCPYCKRARDLLDKK-------GVKYTDIDAS-TSLRQEMVQRA 50 (89)
T ss_dssp EESCSCCTTTHHHHHHHHHH-------TCCEEEECSC-HHHHHHHHHHH
T ss_pred EEECCCChhHHHHHHHHHHc-------CCCcEEEECC-HHHHHHHHHHh
Confidence 34588999999988777653 5777777777 44445555555
No 248
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.01 E-value=0.0057 Score=42.06 Aligned_cols=41 Identities=5% Similarity=0.135 Sum_probs=28.8
Q ss_pred CCCeEEEEEee-CCCCchhHHHHHHHHhhhhHHHH--cCceEEEEeCC
Q 044272 29 GDNWTIIFSHP-GDFTPVCTTELGKMAAYVPEFDK--REVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~-~~~c~~C~~~~~~l~~~~~~~~~--~~v~vv~is~d 73 (133)
.++.++|.||. ++||+ ..|.+.++.+++.. ..+.|.-|..|
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d 75 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVK 75 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECC
Confidence 34566666653 88998 88888888888864 35777777755
No 249
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.92 E-value=0.0012 Score=43.49 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=31.1
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~ 72 (133)
.++.+|+.|| ..|||+|....+.+.++.+++.+ .+.+.-+..
T Consensus 23 ~~~v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEEC
T ss_pred CCCcEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecC
Confidence 3455666655 88899999999999998887765 466655554
No 250
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.91 E-value=0.0017 Score=38.19 Aligned_cols=22 Identities=9% Similarity=0.102 Sum_probs=17.3
Q ss_pred eeCCCCchhHHHHHHHHhhhhH
Q 044272 38 HPGDFTPVCTTELGKMAAYVPE 59 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~ 59 (133)
|+++|||.|+...+-|.++...
T Consensus 17 f~~~~C~~C~~~~~~L~~~~~~ 38 (105)
T 1kte_A 17 FIKPTCPFCRKTQELLSQLPFK 38 (105)
T ss_dssp EECSSCHHHHHHHHHHHHSCBC
T ss_pred EEcCCCHhHHHHHHHHHHcCCC
Confidence 3489999999999888876433
No 251
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=96.81 E-value=0.00051 Score=45.60 Aligned_cols=43 Identities=12% Similarity=0.107 Sum_probs=33.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~d 73 (133)
.++++|+.|| +.|||+|....|.| .++.+.+.+ ++.+.-+-.+
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCEEEEEE-CCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 4567788877 78999999999998 887777754 5777777664
No 252
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.49 E-value=0.0086 Score=35.12 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=25.7
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHh
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKD 84 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~ 84 (133)
|..+|||.|.....-|.+. |+.+..+..+. ++...++.+.
T Consensus 21 y~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~~~~~~~l~~~ 61 (99)
T 3qmx_A 21 YTWSTCPFCMRALALLKRK-------GVEFQEYCIDGDNEAREAMAAR 61 (99)
T ss_dssp EECTTCHHHHHHHHHHHHH-------TCCCEEEECTTCHHHHHHHHHH
T ss_pred EEcCCChhHHHHHHHHHHC-------CCCCEEEEcCCCHHHHHHHHHH
Confidence 4488999999998888764 56655566654 3333334443
No 253
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.46 E-value=0.01 Score=32.82 Aligned_cols=48 Identities=23% Similarity=0.292 Sum_probs=28.6
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhcCCCC-cee
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDIEAYT-PII 92 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~~~~~-~~~ 92 (133)
|...|||.|+....-|.+. |+.+..+..+. ++...++.+.++... |.+
T Consensus 6 y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l 55 (82)
T 1fov_A 6 YTKETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMIKRSGRTTVPQI 55 (82)
T ss_dssp EECSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEE
T ss_pred EECCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE
Confidence 4488999999888777653 56655566553 333344555554433 444
No 254
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.39 E-value=0.0074 Score=36.13 Aligned_cols=22 Identities=14% Similarity=0.320 Sum_probs=16.8
Q ss_pred EEEEeeCCCCchhHHHHHHHHhh
Q 044272 34 IIFSHPGDFTPVCTTELGKMAAY 56 (133)
Q Consensus 34 vl~f~~~~~c~~C~~~~~~l~~~ 56 (133)
+++| +++|||.|+...+-|.++
T Consensus 21 vv~f-~~~~Cp~C~~~~~~L~~~ 42 (114)
T 2hze_A 21 VTIF-VKYTCPFCRNALDILNKF 42 (114)
T ss_dssp EEEE-ECTTCHHHHHHHHHHTTS
T ss_pred EEEE-EeCCChhHHHHHHHHHHc
Confidence 3444 488999999988888765
No 255
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.36 E-value=0.011 Score=34.80 Aligned_cols=40 Identities=5% Similarity=-0.139 Sum_probs=24.9
Q ss_pred CCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhcCC
Q 044272 41 DFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDIEA 87 (133)
Q Consensus 41 ~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~~~ 87 (133)
+|||.|+...+-|.++ ++.+..+..+. ++...+..+..+.
T Consensus 30 ~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~~~~~~~l~~~~g~ 70 (105)
T 2yan_A 30 AKCGFSKQILEILNST-------GVEYETFDILEDEEVRQGLKAYSNW 70 (105)
T ss_dssp BCTTHHHHHHHHHHHH-------TCCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHHHC-------CCCeEEEECCCCHHHHHHHHHHHCC
Confidence 8999999888877664 46655666543 3333334444443
No 256
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.36 E-value=0.02 Score=36.10 Aligned_cols=35 Identities=9% Similarity=0.183 Sum_probs=23.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEE
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGL 70 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~i 70 (133)
.++.+|+.|+ -.+||+|++..+.|.++ .+++++.+
T Consensus 13 ~a~~~vv~f~-D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 13 NGKLKVAVFS-DPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TCCEEEEEEE-CTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHhhc------CceEEEEE
Confidence 3455555554 77799999999998765 24665544
No 257
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.35 E-value=0.0025 Score=41.72 Aligned_cols=48 Identities=10% Similarity=0.104 Sum_probs=33.0
Q ss_pred ecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEeC
Q 044272 23 KLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 23 ~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is~ 72 (133)
.+..-..++++|+.|| ..|||+|....+.+ .++.+.+.+ +++++-+..
T Consensus 7 ~l~~p~~~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 57 (189)
T 3l9v_A 7 SITPPVVDAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHV 57 (189)
T ss_dssp ECSSCCTTCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEEC
T ss_pred EeCCCCCCCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEec
Confidence 4443335567788877 78899999999986 455555543 477776654
No 258
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.33 E-value=0.011 Score=40.32 Aligned_cols=43 Identities=16% Similarity=0.071 Sum_probs=30.2
Q ss_pred CeEEEEEeeCCC--CchhHHHHHHHHhhhhHHHH-cC---ceEEEEeCCC
Q 044272 31 NWTIIFSHPGDF--TPVCTTELGKMAAYVPEFDK-RE---VKLLGLSCDD 74 (133)
Q Consensus 31 ~~~vl~f~~~~~--c~~C~~~~~~l~~~~~~~~~-~~---v~vv~is~d~ 74 (133)
++++|.|| +.| |+.|....+.+.++.+.+.+ +| +.++.+..|.
T Consensus 26 ~pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~ 74 (243)
T 2hls_A 26 NPVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES 74 (243)
T ss_dssp SCEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTT
T ss_pred CCEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCc
Confidence 57888887 667 99999999888887665421 12 6666666553
No 259
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.31 E-value=0.02 Score=32.53 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=29.9
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhcCCCC-cee
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDIEAYT-PII 92 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~~~~~-~~~ 92 (133)
|...|||.|+....-|.+. ++.+..+..+. ++...++.+.++... |.+
T Consensus 11 y~~~~C~~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l 60 (92)
T 2khp_A 11 YTRPGCPYCARAKALLARK-------GAEFNEIDASATPELRAEMQERSGRNTFPQI 60 (92)
T ss_dssp EECTTCHHHHHHHHHHHHT-------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE
T ss_pred EECCCChhHHHHHHHHHHc-------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE
Confidence 4488999999887777653 56666666653 444445555555433 444
No 260
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.31 E-value=0.015 Score=33.73 Aligned_cols=40 Identities=5% Similarity=-0.039 Sum_probs=26.7
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHh
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKD 84 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~ 84 (133)
|..+|||.|.+...-|.+ +|+...-+..+. ++...+..+.
T Consensus 9 Ys~~~Cp~C~~aK~~L~~-------~gi~y~~idi~~d~~~~~~~~~~ 49 (92)
T 2lqo_A 9 YTTSWCGYCLRLKTALTA-------NRIAYDEVDIEHNRAAAEFVGSV 49 (92)
T ss_dssp EECTTCSSHHHHHHHHHH-------TTCCCEEEETTTCHHHHHHHHHH
T ss_pred EcCCCCHhHHHHHHHHHh-------cCCceEEEEcCCCHHHHHHHHHH
Confidence 458999999998776655 477776777764 4444444443
No 261
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.25 E-value=0.02 Score=35.13 Aligned_cols=44 Identities=11% Similarity=0.003 Sum_probs=27.1
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC----HHHHHHHHHhcCCC
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD----VKSHNEWIKDIEAY 88 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~----~~~~~~~~~~~~~~ 88 (133)
|...|||.|+...+-|.++ ++.+..+..|. ++...+..+.++..
T Consensus 32 f~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~~~~~~~~~~~l~~~~g~~ 79 (130)
T 2cq9_A 32 FSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALYKMTGER 79 (130)
T ss_dssp EECSSCSHHHHHHHHHHHH-------TCCCEEEETTTSTTHHHHHHHHHHHHSSC
T ss_pred EEcCCChHHHHHHHHHHHc-------CCCcEEEECcCCcCcHHHHHHHHHHhCCC
Confidence 4489999999988887764 45544555542 23333455555543
No 262
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.11 E-value=0.018 Score=34.27 Aligned_cols=19 Identities=11% Similarity=0.121 Sum_probs=15.4
Q ss_pred eeCCCCchhHHHHHHHHhh
Q 044272 38 HPGDFTPVCTTELGKMAAY 56 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~ 56 (133)
|..+|||.|....+-|.++
T Consensus 24 y~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 24 YSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EECTTCHHHHHHHHHHHHT
T ss_pred EECCCChhHHHHHHHHHHc
Confidence 4488999999888887764
No 263
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.05 E-value=0.053 Score=32.06 Aligned_cols=57 Identities=11% Similarity=0.013 Sum_probs=34.2
Q ss_pred CCCeEEEEEeeC----CCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhcCCCC-ceee
Q 044272 29 GDNWTIIFSHPG----DFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDIEAYT-PIIA 93 (133)
Q Consensus 29 ~~~~~vl~f~~~----~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~~~~~-~~~~ 93 (133)
....++|+ +.+ +|||.|.....-|.++ |+.+..+..+. ++...++.+..+... |.+.
T Consensus 13 ~~~~vvvy-~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~if 75 (109)
T 1wik_A 13 NKASVMLF-MKGNKQEAKCGFSKQILEILNST-------GVEYETFDILEDEEVRQGLKTFSNWPTYPQLY 75 (109)
T ss_dssp TTSSEEEE-ESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEEE
T ss_pred ccCCEEEE-EecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEEE
Confidence 34455554 433 8999999888777654 67777777764 443444555555433 4443
No 264
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.04 E-value=0.02 Score=34.57 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=20.1
Q ss_pred eeCCCCchhHHH-HHHHHhhhhHHHHcCceEEEEeCC
Q 044272 38 HPGDFTPVCTTE-LGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 38 ~~~~~c~~C~~~-~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
|+++|||.|+.. .+-|.+... ..+.+..+..|
T Consensus 30 f~~~~Cp~C~~alk~~L~~~~~----~~i~~~~vdid 62 (118)
T 3c1r_A 30 ASKTYCPYCHAALNTLFEKLKV----PRSKVLVLQLN 62 (118)
T ss_dssp EECSSCHHHHHHHHHHHTTSCC----CGGGEEEEEGG
T ss_pred EEcCCCcCHHHHHHHHHHHcCC----CCCCeEEEECc
Confidence 448999999998 665554321 11666666654
No 265
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=96.01 E-value=0.0089 Score=40.87 Aligned_cols=40 Identities=0% Similarity=0.071 Sum_probs=28.5
Q ss_pred CCCeEEEEEeeC--CCCchhHHHHHHHHhhhhHHHH-cCceEEEEeCC
Q 044272 29 GDNWTIIFSHPG--DFTPVCTTELGKMAAYVPEFDK-REVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~--~~c~~C~~~~~~l~~~~~~~~~-~~v~vv~is~d 73 (133)
.+++++|.|| + +||+ ..|.+.++.+.+.. .++.+..|..|
T Consensus 21 ~~~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd 63 (240)
T 2qc7_A 21 KSKFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGIS 63 (240)
T ss_dssp GCSEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCC
T ss_pred CCCCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 3456767766 7 8888 78888888877764 35777777755
No 266
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=95.83 E-value=0.046 Score=32.65 Aligned_cols=44 Identities=16% Similarity=0.053 Sum_probs=26.2
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC---CHHHHHHH-HHhcCCC
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD---DVKSHNEW-IKDIEAY 88 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d---~~~~~~~~-~~~~~~~ 88 (133)
|..+|||.|.+...-|.++ |+..-.+..| +.....++ .+..+..
T Consensus 22 y~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~ 69 (114)
T 3h8q_A 22 FSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARVQEVLSEITNQK 69 (114)
T ss_dssp EECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHHHHHHHHHHSCC
T ss_pred EEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHHHHHHHHHhCCC
Confidence 4488999999888877764 4554445444 23344343 3444443
No 267
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=95.76 E-value=0.011 Score=38.50 Aligned_cols=38 Identities=5% Similarity=-0.104 Sum_probs=29.1
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
++++|+.|| .-|||+|...-+.+.++.+++ ++.+.-+-
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p 59 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMH 59 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEE
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEe
Confidence 567778877 667999999999999988877 35544444
No 268
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=95.75 E-value=0.028 Score=35.36 Aligned_cols=19 Identities=11% Similarity=0.065 Sum_probs=15.7
Q ss_pred eeCCCCchhHHHHHHHHhh
Q 044272 38 HPGDFTPVCTTELGKMAAY 56 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~ 56 (133)
|+.+|||.|+...+-|.++
T Consensus 54 f~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 54 FSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EECTTCHHHHHHHHHHHHH
T ss_pred EECCCChhHHHHHHHHHHc
Confidence 4589999999988887764
No 269
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=95.65 E-value=0.035 Score=32.46 Aligned_cols=19 Identities=5% Similarity=-0.092 Sum_probs=15.9
Q ss_pred eeCCCCchhHHHHHHHHhh
Q 044272 38 HPGDFTPVCTTELGKMAAY 56 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~ 56 (133)
|+.+|||.|+...+-|.++
T Consensus 27 y~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 27 YGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EECSSCHHHHHHHHHHHHH
T ss_pred EcCCCCchHHHHHHHHHHc
Confidence 4588999999999888764
No 270
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=95.57 E-value=0.04 Score=31.22 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=15.2
Q ss_pred eeCCCCchhHHHHHHHHhh
Q 044272 38 HPGDFTPVCTTELGKMAAY 56 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~ 56 (133)
|..+|||.|+....-|.++
T Consensus 17 y~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 17 YGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp EECTTCHHHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHHc
Confidence 4588999999988777764
No 271
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.45 E-value=0.078 Score=29.56 Aligned_cols=22 Identities=9% Similarity=-0.005 Sum_probs=16.1
Q ss_pred EEEeeCCCCchhHHHHHHHHhh
Q 044272 35 IFSHPGDFTPVCTTELGKMAAY 56 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~ 56 (133)
+.+|..+|||.|+....-|.+.
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~~ 27 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEEN 27 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEEcCCChhHHHHHHHHHHc
Confidence 4445588999999987766553
No 272
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.30 E-value=0.39 Score=37.42 Aligned_cols=118 Identities=14% Similarity=0.200 Sum_probs=64.1
Q ss_pred CCCCCCCCceEEecC-CC-eeecccccC--CCeEEEEEeeCCCCchhHHHHHHHHhhh-------hHHH------HcCce
Q 044272 4 LTIGDSVPNLQVQTN-QG-NFKLHDFIG--DNWTIIFSHPGDFTPVCTTELGKMAAYV-------PEFD------KREVK 66 (133)
Q Consensus 4 l~~G~~~p~f~l~~~-~G-~~~l~d~~~--~~~~vl~f~~~~~c~~C~~~~~~l~~~~-------~~~~------~~~v~ 66 (133)
+.+|..+|++.+... +| .+.|.++.+ |++++|.|-...-.+.+...+..+.+.. ..|. +.-+.
T Consensus 479 ~~~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 558 (665)
T 1pn0_A 479 CVVGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRID 558 (665)
T ss_dssp SCTTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSEE
T ss_pred CCCcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCccceeE
Confidence 578999999999765 78 788988653 6788777643221222333333333322 1121 11266
Q ss_pred EEEEeCCCHHH--HHHHHH---hcCCCC-ceeeCC------cHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 67 LLGLSCDDVKS--HNEWIK---DIEAYT-PIIADP------NREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 67 vv~is~d~~~~--~~~~~~---~~~~~~-~~~~d~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
++.|...+... +..+-. +-+.+. .++.|. .+.+.+.||+.. ...+.+||.|||-|
T Consensus 559 ~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~-----------~~g~~vlvRPD~yV 625 (665)
T 1pn0_A 559 VITIHSCHRDDIEMHDFPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDE-----------TKGAVVVVRPDGYT 625 (665)
T ss_dssp EEEEESSCTTSCCGGGSCTTTTSCTTCCSSEEECSCCSSSCCCCHHHHHTBCT-----------TTCEEEEECTTSBE
T ss_pred EEEEecCCCCccchhhCCHHHcCcccchheEeecCcccccccccHHHHcCCCC-----------CCceEEEECCCCcE
Confidence 77774322111 001100 001122 456663 456888899831 13578999999976
No 273
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=95.30 E-value=0.15 Score=28.57 Aligned_cols=45 Identities=9% Similarity=-0.034 Sum_probs=27.9
Q ss_pred EeeCC----CCchhHHHHHHHHhhhhHHHHcCceEEEEeCC------CHHHHHHHHHhcCCC
Q 044272 37 SHPGD----FTPVCTTELGKMAAYVPEFDKREVKLLGLSCD------DVKSHNEWIKDIEAY 88 (133)
Q Consensus 37 f~~~~----~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d------~~~~~~~~~~~~~~~ 88 (133)
+|..+ +||.|.+...-|.+. |+..-.+..+ +++...++.+..+..
T Consensus 4 iY~~~~~~~~Cp~C~~ak~~L~~~-------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~ 58 (87)
T 1aba_A 4 VYGYDSNIHKCGPCDNAKRLLTVK-------KQPFEFINIMPEKGVFDDEKIAELLTKLGRD 58 (87)
T ss_dssp EEECCTTTSCCHHHHHHHHHHHHT-------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCS
T ss_pred EEEeCCCCCcCccHHHHHHHHHHc-------CCCEEEEEeeccccccCHHHHHHHHHHhCCC
Confidence 34578 899999887776653 5665555554 344444555555554
No 274
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=95.17 E-value=0.036 Score=35.37 Aligned_cols=47 Identities=13% Similarity=-0.039 Sum_probs=32.6
Q ss_pred eecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEE
Q 044272 22 FKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGL 70 (133)
Q Consensus 22 ~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~i 70 (133)
..|.+-..++++|+.|+... ||+|...-+.+.++.+++.+. +.++-+
T Consensus 13 ~vl~~p~~~~~~vvEf~dy~-Cp~C~~~~~~~~~l~~~~~~~-~~~~~~ 59 (184)
T 4dvc_A 13 QVLKTPASSSPVVSEFFSFY-CPHCNTFEPIIAQLKQQLPEG-AKFQKN 59 (184)
T ss_dssp EECSSCCCSSCEEEEEECTT-CHHHHHHHHHHHHHHHTSCTT-CEEEEE
T ss_pred EECCCCCCCCCEEEEEECCC-CHhHHHHhHHHHHHHhhcCCc-eEEEEE
Confidence 44555445677888887544 999999988888887777543 554443
No 275
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.17 E-value=0.064 Score=32.89 Aligned_cols=19 Identities=11% Similarity=0.312 Sum_probs=14.3
Q ss_pred eeCCCCchhHHH-HHHHHhh
Q 044272 38 HPGDFTPVCTTE-LGKMAAY 56 (133)
Q Consensus 38 ~~~~~c~~C~~~-~~~l~~~ 56 (133)
|..+|||.|... .+-|.++
T Consensus 42 y~~~~Cp~C~~a~k~~L~~~ 61 (129)
T 3ctg_A 42 AAKTYCPYCKATLSTLFQEL 61 (129)
T ss_dssp EECTTCHHHHHHHHHHHTTS
T ss_pred EECCCCCchHHHHHHHHHhc
Confidence 348899999988 6666554
No 276
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.65 E-value=0.11 Score=32.27 Aligned_cols=50 Identities=12% Similarity=0.027 Sum_probs=29.6
Q ss_pred CeEEEEEeeC----CCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHHHHHhcCCC
Q 044272 31 NWTIIFSHPG----DFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNEWIKDIEAY 88 (133)
Q Consensus 31 ~~~vl~f~~~----~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~~~~~~~~~ 88 (133)
..++||. .+ .|||.|.....-|.++ |+.+..+..+ +++...++.+..+..
T Consensus 35 ~~Vvvy~-ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~~d~~~~~~L~~~~G~~ 89 (135)
T 2wci_A 35 NPILLYM-KGSPKLPSCGFSAQAVQALAAC-------GERFAYVDILQNPDIRAELPKYANWP 89 (135)
T ss_dssp CSEEEEE-SBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGGGCHHHHHHHHHHHTCC
T ss_pred CCEEEEE-EecCCCCCCccHHHHHHHHHHc-------CCceEEEECCCCHHHHHHHHHHHCCC
Confidence 3455544 34 7899999888777654 5665556654 344444444444543
No 277
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=94.64 E-value=0.035 Score=36.36 Aligned_cols=48 Identities=8% Similarity=0.089 Sum_probs=33.2
Q ss_pred eecccccCCCeEEEEEeeCCCCchhHHHHHHH---HhhhhHHHHcCceEEEEe
Q 044272 22 FKLHDFIGDNWTIIFSHPGDFTPVCTTELGKM---AAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 22 ~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l---~~~~~~~~~~~v~vv~is 71 (133)
..|+.-..++++|+.|+ .-+||+|...-+.| .++.+.+.+ +++++-+-
T Consensus 13 ~~l~~p~~~~~~vvef~-d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~ 63 (191)
T 3l9s_A 13 ITLDKPVAGEPQVLEFF-SFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYH 63 (191)
T ss_dssp EECSSCCCSSSCEEEEE-CTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEE
T ss_pred eEcCCCCCCCCeEEEEE-CCCChhHHHhChhccchHHHHHhCCC-CcEEEEEe
Confidence 55555445677777777 55699999999887 466666654 47766655
No 278
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=94.33 E-value=0.16 Score=39.34 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=64.5
Q ss_pred CCCCCCCCceEEecC-CC-eeeccccc--CCCeEEEEEeeCCCCchhH-HHHHHHHhhh--------hHHHHc------C
Q 044272 4 LTIGDSVPNLQVQTN-QG-NFKLHDFI--GDNWTIIFSHPGDFTPVCT-TELGKMAAYV--------PEFDKR------E 64 (133)
Q Consensus 4 l~~G~~~p~f~l~~~-~G-~~~l~d~~--~~~~~vl~f~~~~~c~~C~-~~~~~l~~~~--------~~~~~~------~ 64 (133)
+.+|..+|+..+... +| .++|.|+. .|+.++|.|- +...+.+. ..+..+.+.. ..|... =
T Consensus 467 ~~~G~r~p~~~~~~~~~g~~~~l~~~~~~~g~~~ll~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 545 (639)
T 2dkh_A 467 FTVGMRFHSAPVVRVCDAKPVQLGHCGKADGRWRLYAFA-AQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSI 545 (639)
T ss_dssp SCTTSBCCCCEEEETTTCCEEEGGGGCCSSSCEEEEEEC-CTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTTSS
T ss_pred CCCcCCCCCCeEEecCCCCEEEHHHhhccCCCEEEEEec-CCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcCce
Confidence 568999999999764 77 78888865 3577777764 33233232 2233333222 123111 1
Q ss_pred ceEEEEeCCCHHH---------HHHHHHhcCC-CC-ceeeCCc----HHHHHHcCCCCCCCCCCCCCCccceeEEEECCC
Q 044272 65 VKLLGLSCDDVKS---------HNEWIKDIEA-YT-PIIADPN----REIIKQLNMVDPDEKDSSGKQLPSRALHIVGPD 129 (133)
Q Consensus 65 v~vv~is~d~~~~---------~~~~~~~~~~-~~-~~~~d~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~ 129 (133)
+.++.|...+... +..+...++. +. .++.|.. +.+.+.||+.. ...+.+||.||
T Consensus 546 ~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~-----------~~g~~v~vRPD 614 (639)
T 2dkh_A 546 FDLRAVFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPDLKNAGQDIFELRGIDR-----------QQGALVVVRPD 614 (639)
T ss_dssp EEEEEECSSCGGGCCGGGSCGGGSCEETTTTEECCCSEEECCCSSTTCCHHHHTTBCT-----------TTCEEEEECTT
T ss_pred EEEEEEecCCCCccchhhCcHhhCCcccccccccceeEEeCCCcccccchHHHhCCCC-----------CceEEEEECCC
Confidence 5666664432111 1111112222 22 5566632 55888899832 24588999999
Q ss_pred Ccc
Q 044272 130 HQV 132 (133)
Q Consensus 130 G~i 132 (133)
|-|
T Consensus 615 ~yv 617 (639)
T 2dkh_A 615 QYV 617 (639)
T ss_dssp SBE
T ss_pred Cce
Confidence 976
No 279
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.18 E-value=0.26 Score=29.22 Aligned_cols=47 Identities=4% Similarity=-0.030 Sum_probs=24.0
Q ss_pred EeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHh
Q 044272 37 SHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKD 84 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~ 84 (133)
+|..++||.|..--. -++..+.+++.++.+.-+..+. ++...++.+.
T Consensus 12 vy~~~~C~~C~~~~~-~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 12 VFIASSSGFVAIKKK-QQDVVRFLEANKIEFEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEECSSCSCHHHHHH-HHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHS
T ss_pred EEEcCCCCCcccchh-HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHH
Confidence 344788999993100 0011122334577777777764 3333344444
No 280
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=93.74 E-value=0.46 Score=28.68 Aligned_cols=64 Identities=5% Similarity=0.055 Sum_probs=42.7
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC----CCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCC
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC----DDVKSHNEWIKDIEAYTPIIADPNREIIKQLNM 105 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~----d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (133)
+.+|...+|+.|++...-|.+ +|+.+-.+.. .+.+.+.++....|.+..-+....+...+.++.
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l 72 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIKKNPPAASLIRNWLENSGLELKKFFNTSGQSYRALGL 72 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETTTSCCCHHHHHHHHHHSCCCGGGGBCTTSHHHHHTTH
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEeccCchhHHHHHHHHHHcCCCHHHHhCCCCcchhhcCc
Confidence 445667889999998877765 3666555543 368899999999986653333345555555554
No 281
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=93.69 E-value=0.3 Score=29.46 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=42.8
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC----CCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCC
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC----DDVKSHNEWIKDIEAYTPIIADPNREIIKQLNM 105 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~----d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (133)
+.+|...+|+.|+....-|.+ +|+.+-.+.. .+.+.+.++....+....-+....+...+.++.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~ 69 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDI 69 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHHHHHTTC
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHHHHHcCC
Confidence 345667889999998877765 3666555543 367888999998776653333345566666664
No 282
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=93.64 E-value=0.31 Score=29.88 Aligned_cols=63 Identities=11% Similarity=0.176 Sum_probs=40.7
Q ss_pred EEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--C--CHHHHHHHHHhcCCCCceeeCCcHHHHHHcCC
Q 044272 36 FSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC--D--DVKSHNEWIKDIEAYTPIIADPNREIIKQLNM 105 (133)
Q Consensus 36 ~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~--d--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (133)
.+|..++|+.|+....-|.+ .|+.+-.+.. + +.+.+.++....+....-+....+...+.++.
T Consensus 4 ~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~~k~l~~ 70 (132)
T 1z3e_A 4 TLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNV 70 (132)
T ss_dssp EEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTTSHHHHHHCC
T ss_pred EEEeCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHHHcCCCHHHhhcCCchHHHhcCc
Confidence 34557889999988777765 3666555544 3 45788888887776553333445556666554
No 283
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=93.35 E-value=0.11 Score=33.43 Aligned_cols=41 Identities=12% Similarity=0.076 Sum_probs=29.8
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHH-HhhhhHHHHcCceEEEEeC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKM-AAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l-~~~~~~~~~~~v~vv~is~ 72 (133)
++.+++.|| ...||+|....+.+ .++.+++.. .+++..+..
T Consensus 17 ~~~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVF-SYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEEC
T ss_pred CCcEEEEEE-eCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEec
Confidence 345677777 47899999999998 777766653 377666654
No 284
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=93.26 E-value=0.31 Score=29.41 Aligned_cols=49 Identities=8% Similarity=0.076 Sum_probs=27.2
Q ss_pred ccccCCCeEEEEEeeC----CCCchhHHHHHHHHhhhhHHHHcCce-EEEEeCCCHHHHHHH
Q 044272 25 HDFIGDNWTIIFSHPG----DFTPVCTTELGKMAAYVPEFDKREVK-LLGLSCDDVKSHNEW 81 (133)
Q Consensus 25 ~d~~~~~~~vl~f~~~----~~c~~C~~~~~~l~~~~~~~~~~~v~-vv~is~d~~~~~~~~ 81 (133)
.++...++++||- .+ ++||+|.+...-|.+. |+. +..+..+.....++.
T Consensus 14 ~~~i~~~~Vvvfs-k~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~vdV~~d~~~~~~ 67 (118)
T 2wem_A 14 DALVKKDKVVVFL-KGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDDPELRQG 67 (118)
T ss_dssp HHHHHHSSEEEEE-SBCSSSBSSHHHHHHHHHHHHT-------TCCCCEEEESSSCHHHHHH
T ss_pred HHHhccCCEEEEE-ecCCCCCccHHHHHHHHHHHHc-------CCCCCEEEEcCCCHHHHHH
Confidence 3333444565543 34 3899999988777764 553 445555432333333
No 285
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=93.05 E-value=0.39 Score=29.03 Aligned_cols=64 Identities=9% Similarity=0.077 Sum_probs=42.2
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe--C--CCHHHHHHHHHhcCCCCceeeCCcHHHHHHcCC
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS--C--DDVKSHNEWIKDIEAYTPIIADPNREIIKQLNM 105 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is--~--d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (133)
+.+|....|+.|++...-|.+ +|+.+-.+. - .+.+.+.++....|.+..-+....+...+.++.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~l~n~~~~~~k~l~l 73 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIVDDNPTVEELKAWIPLSGLPVKKFFNTSGVVYKELKL 73 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTTCCCHHHHHHHHHHHTSCGGGGBCTTSHHHHHTTH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecccCcCCHHHHHHHHHHcCCCHHHeEeCCCchhhhcCc
Confidence 445667889999998877765 365544443 3 368899999999987653333345555555553
No 286
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.91 E-value=0.43 Score=28.79 Aligned_cols=52 Identities=10% Similarity=0.041 Sum_probs=29.3
Q ss_pred CCCeEEEEEeeC----CCCchhHHHHHHHHhhhhHHHHcCce---EEEEeCCC-HHHHHHHHHhcCCC
Q 044272 29 GDNWTIIFSHPG----DFTPVCTTELGKMAAYVPEFDKREVK---LLGLSCDD-VKSHNEWIKDIEAY 88 (133)
Q Consensus 29 ~~~~~vl~f~~~----~~c~~C~~~~~~l~~~~~~~~~~~v~---vv~is~d~-~~~~~~~~~~~~~~ 88 (133)
...+++||-- + +|||+|.....-|.+. |+. +.-+..+. ++...+..+..|..
T Consensus 14 ~~~~Vvvfsk-~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~ 73 (121)
T 3gx8_A 14 ESAPVVLFMK-GTPEFPKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLEDPELREGIKEFSEWP 73 (121)
T ss_dssp HSCSEEEEES-BCSSSBCTTHHHHHHHHHHHH-------TBCGGGEEEEECTTCHHHHHHHHHHHTCC
T ss_pred ccCCEEEEEe-ccCCCCCCccHHHHHHHHHHc-------CCCcceEEEEEecCCHHHHHHHHHHhCCC
Confidence 3445655543 4 3899999988877764 444 44455443 33333344444443
No 287
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=92.70 E-value=0.48 Score=26.87 Aligned_cols=42 Identities=7% Similarity=-0.045 Sum_probs=23.6
Q ss_pred eeCCCCchh------HHHHHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhcC
Q 044272 38 HPGDFTPVC------TTELGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDIE 86 (133)
Q Consensus 38 ~~~~~c~~C------~~~~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~~ 86 (133)
|..++||.| .....-| ++.|+.+.-+..+. ++...+..+..|
T Consensus 7 y~~~~C~~c~~~~~~~~ak~~L-------~~~~i~~~~~di~~~~~~~~~l~~~~g 55 (93)
T 1t1v_A 7 YSTSVTGSREIKSQQSEVTRIL-------DGKRIQYQLVDISQDNALRDEMRTLAG 55 (93)
T ss_dssp EECSSCSCHHHHHHHHHHHHHH-------HHTTCCCEEEETTSCHHHHHHHHHHTT
T ss_pred EEcCCCCCchhhHHHHHHHHHH-------HHCCCceEEEECCCCHHHHHHHHHHhC
Confidence 347889999 4433333 34567766666653 344444455555
No 288
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.58 E-value=0.46 Score=28.16 Aligned_cols=51 Identities=4% Similarity=-0.080 Sum_probs=29.6
Q ss_pred cCCCeEEEEEeeC-----CCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHHHHHhcCC
Q 044272 28 IGDNWTIIFSHPG-----DFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNEWIKDIEA 87 (133)
Q Consensus 28 ~~~~~~vl~f~~~-----~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~~~~~~~~ 87 (133)
...++++|+. . ++||.|.+...-|.+. |+.+..+..+ +++...+..+..+.
T Consensus 13 i~~~~Vvlf~--kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~~~di~~d~~~~~~l~~~~g~ 69 (111)
T 3zyw_A 13 THAAPCMLFM--KGTPQEPRCGFSKQMVEILHKH-------NIQFSSFDIFSDEEVRQGLKAYSSW 69 (111)
T ss_dssp HTSSSEEEEE--SBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred HhcCCEEEEE--ecCCCCCcchhHHHHHHHHHHc-------CCCeEEEECcCCHHHHHHHHHHHCC
Confidence 3555666654 4 7899999988877754 5554455543 23333334333343
No 289
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=92.39 E-value=0.59 Score=27.49 Aligned_cols=37 Identities=11% Similarity=0.158 Sum_probs=23.7
Q ss_pred CCCeEEEEEeeC----CCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 29 GDNWTIIFSHPG----DFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 29 ~~~~~vl~f~~~----~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
..++++||- .+ .+||.|.+...-|.+. |+.+-.+..+
T Consensus 16 ~~~~Vvvy~-k~t~~~p~Cp~C~~ak~~L~~~-------gi~~~~~dI~ 56 (109)
T 3ipz_A 16 NSEKVVLFM-KGTRDFPMCGFSNTVVQILKNL-------NVPFEDVNIL 56 (109)
T ss_dssp TSSSEEEEE-SBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGG
T ss_pred ccCCEEEEE-ecCCCCCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 445565553 34 3899999988877764 5555555553
No 290
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=92.28 E-value=0.53 Score=28.45 Aligned_cols=65 Identities=9% Similarity=0.075 Sum_probs=44.1
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC----CCHHHHHHHHHhcCC-CCceeeCCcHHHHHHcCCC
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC----DDVKSHNEWIKDIEA-YTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~----d~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~ 106 (133)
+.+|....|+.|++...-|.+ +|+.+-.+.. .+.+.+.++....|. ...-+....+...+.++..
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTSCCCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccCCCcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCcc
Confidence 345667889999998877765 3555444433 368899999999987 5422334566677777764
No 291
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=92.23 E-value=0.27 Score=32.95 Aligned_cols=31 Identities=3% Similarity=0.121 Sum_probs=26.2
Q ss_pred ceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 90 PIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 90 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
+.+.+.+..+.+.||+ ...|+.++++++|++
T Consensus 188 ~~~~~~~~~l~~~f~v------------~~~Pslvl~~~~g~~ 218 (244)
T 3q6o_A 188 RRVLNTEANVVRKFGV------------TDFPSCYLLFRNGSV 218 (244)
T ss_dssp EEEETTCHHHHHHHTC------------CCSSEEEEEETTSCE
T ss_pred EEEeCchHHHHHHcCC------------CCCCeEEEEeCCCCe
Confidence 5566677899999999 468999999999985
No 292
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=92.23 E-value=0.26 Score=32.44 Aligned_cols=43 Identities=14% Similarity=0.113 Sum_probs=26.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHH-HhhhhHHHH-cCceEEEEeC
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKM-AAYVPEFDK-REVKLLGLSC 72 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l-~~~~~~~~~-~~v~vv~is~ 72 (133)
.++.+|+.|+ .-.||+|...-+.+ .++.+.|.+ ..++++..-.
T Consensus 28 ~a~vtvvef~-D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFG-DYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 4455666665 44599999987776 444455543 2477666553
No 293
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=92.14 E-value=0.34 Score=33.71 Aligned_cols=39 Identities=15% Similarity=0.333 Sum_probs=27.5
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~ 72 (133)
++.++++|+ -..||+|++..+++.+..+ +-.|+++.+-.
T Consensus 147 gk~~I~vFt-Dp~CPYCkkl~~~l~~~l~---~~~Vr~i~~Pi 185 (273)
T 3tdg_A 147 KDKILYIVS-DPMCPHCQKELTKLRDHLK---ENTVRMVVVGW 185 (273)
T ss_dssp TTCEEEEEE-CTTCHHHHHHHHTHHHHHH---HCEEEEEECCC
T ss_pred CCeEEEEEE-CcCChhHHHHHHHHHHHhh---CCcEEEEEeec
Confidence 456777766 5569999999999986553 33466666554
No 294
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=91.69 E-value=0.39 Score=29.94 Aligned_cols=64 Identities=11% Similarity=0.020 Sum_probs=42.4
Q ss_pred EEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC--C--CHHHHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 36 FSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC--D--DVKSHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 36 ~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~--d--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+|...+|+.|++...-|.+ +|+.+-.+.. + +.+.+.++....+.+..-+....+...+.++..
T Consensus 5 tiY~~p~C~~crkak~~L~~-------~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~ 72 (141)
T 1s3c_A 5 TIYHNPASGTSRNTLEMIRN-------SGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLA 72 (141)
T ss_dssp EEECCTTCHHHHHHHHHHHH-------TTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHHHHHTTTT
T ss_pred EEEECCCChHHHHHHHHHHH-------cCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchhHHhcCCc
Confidence 35667889999988777665 3666545543 2 578888999988876522234455666666653
No 295
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=91.48 E-value=0.15 Score=33.11 Aligned_cols=40 Identities=8% Similarity=-0.040 Sum_probs=27.0
Q ss_pred eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
+++|+.|.--.||+|.+..+.+.++.+++....++++...
T Consensus 15 ~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 15 PRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp SEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 4545444455699999999998887776522247776654
No 296
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=91.38 E-value=0.68 Score=27.87 Aligned_cols=65 Identities=9% Similarity=0.087 Sum_probs=44.8
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe----CCCHHHHHHHHHhcCCC-CceeeCCcHHHHHHcCCC
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS----CDDVKSHNEWIKDIEAY-TPIIADPNREIIKQLNMV 106 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is----~d~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~ 106 (133)
+.+|....|+.|++...-|.+ +|+.+-.+. .-+.+.+.++....|.. ..-+....+...+.++..
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~ 75 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-------QGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLG 75 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECHHHHCCCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEEeccCcCcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCcc
Confidence 345667789999998877765 356544443 34788999999999976 433344566777777664
No 297
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=91.28 E-value=1.4 Score=33.08 Aligned_cols=89 Identities=19% Similarity=0.265 Sum_probs=52.8
Q ss_pred CCCCCCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhh-HHHHcCceEEEEeCCCHHHHHHH
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVP-EFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~-~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
..+|..+|+.-+.. +| .+++-|+.+...++|. + .. .. .+.+... ..+..|+.+-.+...+.
T Consensus 420 ~~pG~r~p~~~l~~-~~~~~~~~dl~g~~f~ll~-~-~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~------ 482 (535)
T 3ihg_A 420 GRPGFRGPHVLVSR-HGERLSTVDLFGDGWTLLA-G-EL--GA------DWVAAAEAVSAELGVPVRAYRVGAG------ 482 (535)
T ss_dssp CCTTSBCCCCEEEE-TTEEEEGGGGCSSSEEEEE-C-TT--CH------HHHHHHHHHHHHHTCCEEEEEBTTT------
T ss_pred CCCCCcCCCceeec-CCceeeHHHhcCCceEEEe-c-CC--cc------HHHHHHHHHHHhcCCceEEEEeCCc------
Confidence 57899999998854 46 6899888655555554 2 11 11 1111111 11233544333333221
Q ss_pred HHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 82 IKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 82 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
+.|..+...+.||+. ....+||.|||-|
T Consensus 483 ----------~~d~~~~~~~~~~~~-------------~~~~~lvRPD~~v 510 (535)
T 3ihg_A 483 ----------LTDPESAVSERYGIG-------------KAGASLVRPDGIV 510 (535)
T ss_dssp ----------BBCSSCCHHHHHTCT-------------TTCEEEECTTSBE
T ss_pred ----------cccCcchHHHHhCCC-------------CCceEeeCCCcee
Confidence 457777888999883 3468899999976
No 298
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=90.97 E-value=0.78 Score=27.26 Aligned_cols=44 Identities=7% Similarity=-0.099 Sum_probs=31.3
Q ss_pred EEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC----CCHHHHHHHHHhcC
Q 044272 36 FSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC----DDVKSHNEWIKDIE 86 (133)
Q Consensus 36 ~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~----d~~~~~~~~~~~~~ 86 (133)
.+|..++|+.|+....-|.+ +|+.+-.+.. .+.+.+.++.++.|
T Consensus 3 ~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 3 VLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCAEHG 50 (114)
T ss_dssp EEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHHHHC
T ss_pred EEEECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHHhCC
Confidence 34567889999988777665 3666555543 24588888888877
No 299
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=90.95 E-value=0.52 Score=31.13 Aligned_cols=50 Identities=8% Similarity=-0.031 Sum_probs=29.6
Q ss_pred CeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhh-HHH-HcCceEEEEe
Q 044272 20 GNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVP-EFD-KREVKLLGLS 71 (133)
Q Consensus 20 G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~-~~~-~~~v~vv~is 71 (133)
|...+.+- .++.+|+.|+ ---||+|....+.+....+ +|- ...++++...
T Consensus 6 ~~~~~G~~-~a~vtivef~-D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 6 GHHLLGNP-AAKLRLVEFV-SYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp TEEEESCT-TCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CCceecCC-CCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 33444443 4445555555 5559999998887765544 552 3347766554
No 300
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.76 E-value=2.2 Score=27.50 Aligned_cols=83 Identities=5% Similarity=-0.013 Sum_probs=47.7
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHH--hhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHH---HHc
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMA--AYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREII---KQL 103 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~--~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~ 103 (133)
.+|+++|+ +.+.+|+.|.....++- +...++=+.+..+++...++.+....+....+... ...++ +.|
T Consensus 54 e~K~LlVy-Lhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~------g~~~a~~~~~~ 126 (178)
T 2ec4_A 54 DRKLLAIY-LHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHF------GSVVAQTIRTQ 126 (178)
T ss_dssp TCCEEEEE-EECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHT------CHHHHHHHHHS
T ss_pred hCcEEEEE-EeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhh------HHHHHHHHhhc
Confidence 34555555 55889999988876652 11222323468888888887775544433332110 11232 336
Q ss_pred CCCCCCCCCCCCCCccceeEEEECCCC
Q 044272 104 NMVDPDEKDSSGKQLPSRALHIVGPDH 130 (133)
Q Consensus 104 ~~~~~~~~~~~~~~~~~p~~~lid~~G 130 (133)
++ ...|...+|++.|
T Consensus 127 ~~------------~~~P~l~ii~~~~ 141 (178)
T 2ec4_A 127 KT------------DQFPLFLIIMGKR 141 (178)
T ss_dssp CS------------TTCSEEEEECCCS
T ss_pred CC------------CCCCeEEEEEcCC
Confidence 66 3688888887764
No 301
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=90.69 E-value=0.34 Score=31.07 Aligned_cols=40 Identities=10% Similarity=0.062 Sum_probs=26.2
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHH-hhhhHHHHc-CceEEEEe
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMA-AYVPEFDKR-EVKLLGLS 71 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~-~~~~~~~~~-~v~vv~is 71 (133)
+..|++|+ ...||+|....+.+. .+.+++.+. +++++...
T Consensus 12 ~~~i~~f~-D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 12 KPLVVVYG-DYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp CCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CeEEEEEE-CCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 44455544 666999999999884 555666532 47766554
No 302
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=89.72 E-value=1.2 Score=26.73 Aligned_cols=61 Identities=5% Similarity=-0.031 Sum_probs=38.3
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC----CCHHHHHHHHHhcCCCCceeeCCcHHHHHHcC
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC----DDVKSHNEWIKDIEAYTPIIADPNREIIKQLN 104 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~----d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (133)
+.+|..++|+.|++...-|.+. |+.+-.+.. .+.+.+.++.++.|.. .++ ...+...+.++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~~~~~~~l~~~~~~~g~~-~l~-n~~~~~~k~l~ 71 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKKEGLDAETLDRFLKTVPWE-QLL-NRAGTTFRKLP 71 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHHHCCCHHHHHHHHHHSCGG-GTB-CSSSHHHHHSC
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeCCCCCHHHHHHHHHHcChH-hhc-cCCchhhHhcC
Confidence 3445578899999888777653 666544443 3468888888887742 222 23445555554
No 303
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=89.21 E-value=0.61 Score=31.27 Aligned_cols=42 Identities=5% Similarity=-0.114 Sum_probs=26.8
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHH-HhhhhHHHH-cCceEEEEe
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKM-AAYVPEFDK-REVKLLGLS 71 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l-~~~~~~~~~-~~v~vv~is 71 (133)
.++.+|+.|+ .-.||+|...-+.+ .++.+++-+ ..++++...
T Consensus 38 ~A~vtIvef~-Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYA-SLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEE-CTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 3455566665 44599999988865 566666743 246766554
No 304
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=88.79 E-value=0.65 Score=31.03 Aligned_cols=19 Identities=11% Similarity=0.127 Sum_probs=14.1
Q ss_pred EeeCCCCchhHHHHHHHHh
Q 044272 37 SHPGDFTPVCTTELGKMAA 55 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~ 55 (133)
+|...+||.|.+...-|.+
T Consensus 174 ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 174 IFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp EEECSSCHHHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHH
Confidence 3447889999988776665
No 305
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=88.68 E-value=0.35 Score=29.55 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=28.9
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHHHHHh-cCC
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNEWIKD-IEA 87 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~~~~~-~~~ 87 (133)
.+++|| ..+|||.|.+...-|.+... + .-...++-|..+ +.+..+++..+ .+.
T Consensus 14 ~~Vvvy--sk~~Cp~C~~ak~lL~~~~~-~-~v~~~~idid~~~d~~~~~~~l~~~~G~ 68 (127)
T 3l4n_A 14 SPIIIF--SKSTCSYSKGMKELLENEYQ-F-IPNYYIIELDKHGHGEELQEYIKLVTGR 68 (127)
T ss_dssp CSEEEE--ECTTCHHHHHHHHHHHHHEE-E-ESCCEEEEGGGSTTHHHHHHHHHHHHSC
T ss_pred CCEEEE--EcCCCccHHHHHHHHHHhcc-c-CCCcEEEEecCCCCHHHHHHHHHHHcCC
Confidence 344433 37899999998887776310 0 012445555543 33555555543 344
No 306
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=88.11 E-value=2.7 Score=29.16 Aligned_cols=37 Identities=8% Similarity=0.087 Sum_probs=26.5
Q ss_pred EEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC
Q 044272 33 TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 33 ~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~ 72 (133)
+.|..|.+.+||.|...-.-|.++..+ .++..+.+..
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v 80 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHV 80 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEEC
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEE
Confidence 566667799999999998888876543 3565555554
No 307
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=87.97 E-value=0.035 Score=24.87 Aligned_cols=20 Identities=15% Similarity=0.228 Sum_probs=17.5
Q ss_pred CchhHHHHHHHHhhhhHHHH
Q 044272 43 TPVCTTELGKMAAYVPEFDK 62 (133)
Q Consensus 43 c~~C~~~~~~l~~~~~~~~~ 62 (133)
||+|+.++|.+..+...|.+
T Consensus 6 CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 6 CPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CTTSSCEESSHHHHHHHHHH
T ss_pred CccccccCcChHHHHHHHHH
Confidence 99999999999998877764
No 308
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=86.51 E-value=0.46 Score=36.02 Aligned_cols=31 Identities=3% Similarity=0.130 Sum_probs=26.8
Q ss_pred ceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCCcc
Q 044272 90 PIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQV 132 (133)
Q Consensus 90 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i 132 (133)
+.+.+.+..+.+.||+ ...|+.++++++|++
T Consensus 188 ~~v~~~~~~l~~kfgV------------~~~Pslvl~~~nGk~ 218 (519)
T 3t58_A 188 RRVLNTESDLVNKFGV------------TDFPSCYLLLRNGSV 218 (519)
T ss_dssp EEEETTCHHHHHHHTC------------CCSSEEEEEETTSCE
T ss_pred EEecCchHHHHHHcCC------------CCCCeEEEEeCCCce
Confidence 6677778899999999 358999999999975
No 309
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=83.98 E-value=5.2 Score=24.17 Aligned_cols=49 Identities=0% Similarity=-0.087 Sum_probs=26.9
Q ss_pred EEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC-CHHHHHHHHHhc
Q 044272 36 FSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD-DVKSHNEWIKDI 85 (133)
Q Consensus 36 ~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d-~~~~~~~~~~~~ 85 (133)
..|.++.||.|..--..-. ...-++.+||.+--+..+ +++.-.++.++.
T Consensus 3 ~vYtt~~c~~c~~kk~c~~-aK~lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 3 RVYIASSSGSTAIKKKQQD-VLGFLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EEEECTTCSCHHHHHHHHH-HHHHHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred EEEecCCCCCccchHHHHH-HHHHHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 3345778999952211111 122345568887777765 445555555565
No 310
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=83.61 E-value=2.5 Score=25.43 Aligned_cols=56 Identities=5% Similarity=-0.035 Sum_probs=28.2
Q ss_pred cccCCCeEEEEEeeC---CCCchhHHHHHHHHhhhhHHHHcCce-EEEEeCCC-HHHHHHHHHhcCCC
Q 044272 26 DFIGDNWTIIFSHPG---DFTPVCTTELGKMAAYVPEFDKREVK-LLGLSCDD-VKSHNEWIKDIEAY 88 (133)
Q Consensus 26 d~~~~~~~vl~f~~~---~~c~~C~~~~~~l~~~~~~~~~~~v~-vv~is~d~-~~~~~~~~~~~~~~ 88 (133)
++....++|||-=.. +.||+|.+...-|.+. |+. +..+..+. ++......+..+++
T Consensus 15 ~~i~~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~-------gv~~~~~~~v~~~~~~r~~l~~~sg~~ 75 (118)
T 2wul_A 15 ALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDDPELRQGIKDYSNWP 75 (118)
T ss_dssp HHHHHSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCSCEEEETTSCHHHHHHHHHHHTCC
T ss_pred HHHhcCCEEEEEcCCCCCCCCHHHHHHHHHHHHh-------CCcCeEeecccCCHHHHHHHHHhccCC
Confidence 333445566654321 3688888877666543 452 44455433 43333334444443
No 311
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=82.69 E-value=8.7 Score=26.73 Aligned_cols=66 Identities=8% Similarity=0.110 Sum_probs=37.0
Q ss_pred CCCCceEEecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHH
Q 044272 8 DSVPNLQVQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH 78 (133)
Q Consensus 8 ~~~p~f~l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~ 78 (133)
+.+|-|.++|.+| .+-.+. +++-+.++|+ .. .-....+.++.+....-...+++|+.||.+....+
T Consensus 75 ~~VPVF~Itn~~G~Pll~~~--~~~~V~~fF~-s~--~DA~a~L~el~k~~~~~~~~~~kV~pvsL~kvy~l 141 (279)
T 4e6z_A 75 EVIPVFLITNYNSSPYIFQE--NEKQVCYMFL-CP--YDAENMLNDMIKYNGMKYNGNIKIHNITMKKAYEL 141 (279)
T ss_dssp TTSEEEEEECTTCCBCCEEE--TTEEEEEEES-SH--HHHHHHHHHHHHHCHHHHTTSCEEEEEEHHHHHHH
T ss_pred cCCCEEEEEcCCCCEEEecC--CCCeEEEEEC-CH--HHHHHHHHHHHhccCcccccCceEEEecHHHHHHH
Confidence 3689999999999 543333 3344555554 21 22233333443322211234799999999865544
No 312
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=82.02 E-value=3.2 Score=27.37 Aligned_cols=42 Identities=5% Similarity=0.058 Sum_probs=31.5
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
.+.++++|...+|+.|....+.+.++.++++.+ +.++.+..+
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~ 172 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSG 172 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETT
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCc
Confidence 345555555668999999999999988888754 777777765
No 313
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=80.29 E-value=3.2 Score=26.91 Aligned_cols=37 Identities=3% Similarity=-0.078 Sum_probs=24.0
Q ss_pred EEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 34 IIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 34 vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
.|.+|.-.-||.|-...+.+.++.+ +.+.++++..+.
T Consensus 9 ~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 9 VLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred eEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 3455556679999977776776655 444457766554
No 314
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=79.58 E-value=0.12 Score=24.14 Aligned_cols=20 Identities=20% Similarity=0.564 Sum_probs=16.7
Q ss_pred CchhHHHHHHHHhhhhHHHH
Q 044272 43 TPVCTTELGKMAAYVPEFDK 62 (133)
Q Consensus 43 c~~C~~~~~~l~~~~~~~~~ 62 (133)
||.|...+....++...|++
T Consensus 8 CP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCEESSHHHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHHHh
Confidence 99999998888888777764
No 315
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=78.42 E-value=2.9 Score=25.19 Aligned_cols=55 Identities=11% Similarity=0.025 Sum_probs=39.2
Q ss_pred ccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 27 FIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 27 ~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
|.++.++||.+-.-. . . .++.++.+.+.+.|+.+++|...+++..++.+...|.+
T Consensus 44 FF~~aPVVlDl~~l~--~--~---~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~GLp 98 (120)
T 3ghf_A 44 FLKHAPVVINVSGLE--S--P---VNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRMGLP 98 (120)
T ss_dssp HHTTCEEEEEEEECC--S--S---CCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred hhCCCcEEEEccccC--C--h---HHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHCCCC
Confidence 447889998874222 1 1 34666667778889999999987667677888887764
No 316
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=75.01 E-value=2.3 Score=25.64 Aligned_cols=30 Identities=13% Similarity=0.317 Sum_probs=22.5
Q ss_pred CeEEEEEeeCCCCchhHHHHHHHHhhhhHHH
Q 044272 31 NWTIIFSHPGDFTPVCTTELGKMAAYVPEFD 61 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~ 61 (133)
|.+++.|- -+.|++|.....-|.++.++|+
T Consensus 2 K~tLILfG-KP~C~vCe~~s~~l~~ledeY~ 31 (124)
T 2g2q_A 2 KNVLIIFG-KPYCSICENVSDAVEELKSEYD 31 (124)
T ss_dssp CEEEEEEE-CTTCHHHHHHHHHHHTTTTTEE
T ss_pred CceEEEeC-CCccHHHHHHHHHHHHhhcccc
Confidence 34556654 7889999999988877766654
No 317
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=72.94 E-value=3 Score=22.97 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=25.3
Q ss_pred CCCeEEEEEeeCCCCchh------HHHHHHHHhhhhHHHH
Q 044272 29 GDNWTIIFSHPGDFTPVC------TTELGKMAAYVPEFDK 62 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C------~~~~~~l~~~~~~~~~ 62 (133)
+|+.+++--.++.+|+.| ...+..+.++..+|+.
T Consensus 25 ~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 25 RGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp TTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 778787877788889988 5566677777666654
No 318
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=71.54 E-value=6.9 Score=25.31 Aligned_cols=37 Identities=3% Similarity=0.008 Sum_probs=27.3
Q ss_pred EEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 34 IIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 34 vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
-|.+|+-.-||.|-...+.|.++.+++. .++.|....
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 3555556779999999999999888774 247665554
No 319
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=67.11 E-value=10 Score=28.83 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=14.0
Q ss_pred eCCCCchhHHHHHHHHhh
Q 044272 39 PGDFTPVCTTELGKMAAY 56 (133)
Q Consensus 39 ~~~~c~~C~~~~~~l~~~ 56 (133)
...|||.|.....-|.+.
T Consensus 24 ~~~~Cp~C~~~k~~L~~~ 41 (598)
T 2x8g_A 24 SKTTCPYCKKVKDVLAEA 41 (598)
T ss_dssp ECTTCHHHHHHHHHHHHT
T ss_pred ECCCChhHHHHHHHHHHC
Confidence 377899999887777654
No 320
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=66.40 E-value=11 Score=21.39 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=19.1
Q ss_pred CeeecccccCCCeEEEEEeeCCCCchhHHHHHHHH
Q 044272 20 GNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMA 54 (133)
Q Consensus 20 G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~ 54 (133)
|.+.|-++ .+..+.|-+ .+. |..|....-.|.
T Consensus 28 Gdvelv~v-~~g~V~V~L-~Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 28 GDCTLVDV-EDGIVKLQL-HGA-CGTCPSSTITLK 59 (88)
T ss_dssp CEEEEEEC-CSSEEEEEE-ESS-CCSSCHHHHHHH
T ss_pred CeEEEEEE-ECCEEEEEE-eec-CCCCcchHHHHH
Confidence 48888888 555555554 366 555555544444
No 321
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=65.74 E-value=16 Score=25.01 Aligned_cols=68 Identities=13% Similarity=0.119 Sum_probs=38.4
Q ss_pred CCCCceEEecCCC-ee--ecccccC----CCeEEEEEeeCCCCchhHHHHHHHHh---hhh---HHHHcCceEEEEeCCC
Q 044272 8 DSVPNLQVQTNQG-NF--KLHDFIG----DNWTIIFSHPGDFTPVCTTELGKMAA---YVP---EFDKREVKLLGLSCDD 74 (133)
Q Consensus 8 ~~~p~f~l~~~~G-~~--~l~d~~~----~~~~vl~f~~~~~c~~C~~~~~~l~~---~~~---~~~~~~v~vv~is~d~ 74 (133)
+.+|-|.++|.+| .+ +..+-.. ++.+.++|+ + -.-....+.+|.. .-. ++. .+++|..||.+.
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~-s--~~dA~~~L~~lk~~~~~np~~~~~~-~~~kV~~vsL~~ 87 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM-S--RQEAQAFINELRNAKNKDPKMQEIV-KSLQVTAVPLGV 87 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES-C--HHHHHHHHHHHHHCSSCCHHHHHHH-TTCEEEEEEHHH
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe-c--HHHHHHHHHHHHhccccCchhhhhc-cCceEEEeeHHH
Confidence 3589999999999 53 3333211 344555554 2 1233444444444 222 222 369999999986
Q ss_pred HHHHH
Q 044272 75 VKSHN 79 (133)
Q Consensus 75 ~~~~~ 79 (133)
...+.
T Consensus 88 vyql~ 92 (252)
T 4ev1_A 88 IYQQL 92 (252)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
No 322
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=65.07 E-value=9.6 Score=27.57 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=15.0
Q ss_pred CeEEEEEeeCCCCchhHHHHHH-HHhh
Q 044272 31 NWTIIFSHPGDFTPVCTTELGK-MAAY 56 (133)
Q Consensus 31 ~~~vl~f~~~~~c~~C~~~~~~-l~~~ 56 (133)
..++|+ ..++||.|.+.... |.+.
T Consensus 261 ~~VvVY--sk~~CPyC~~Ak~~LL~~~ 285 (362)
T 2jad_A 261 NEIFVA--SKTYCPYSHAALNTLFEKL 285 (362)
T ss_dssp CSEEEE--ECTTCHHHHHHHHHHHTTT
T ss_pred CCEEEE--EcCCCcchHHHHHHHHHHc
Confidence 344443 36789999987663 4443
No 323
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=61.72 E-value=12 Score=24.07 Aligned_cols=34 Identities=3% Similarity=-0.005 Sum_probs=25.5
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
|.+|+-.-||.|-.-.+.|.++.+.+ +++|....
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~p 36 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYNA 36 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 45555667999999999999988776 46655544
No 324
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=61.63 E-value=10 Score=26.90 Aligned_cols=38 Identities=5% Similarity=-0.026 Sum_probs=32.6
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhc
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDI 85 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~ 85 (133)
+..+.+.++.+.++++|++++.||....+.++.+++..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 45667778888899999999999999999999999873
No 325
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=60.65 E-value=29 Score=22.63 Aligned_cols=39 Identities=10% Similarity=0.045 Sum_probs=28.7
Q ss_pred HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCcee
Q 044272 54 AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPII 92 (133)
Q Consensus 54 ~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~ 92 (133)
.+..++++++|+.++.+|-.+.....++++..+...+++
T Consensus 28 ~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I 66 (227)
T 1l6r_A 28 IESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVF 66 (227)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEE
Confidence 334445566799999889888888888888887654443
No 326
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=60.59 E-value=23 Score=22.61 Aligned_cols=39 Identities=3% Similarity=-0.197 Sum_probs=32.2
Q ss_pred HHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 50 LGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 50 ~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.+...++.+.++++|+.+..+|..........++..+..
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456667777788889999999998888888899988875
No 327
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=60.25 E-value=10 Score=27.44 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=34.9
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
+..|.+.++.+.++++|+.++.||-+..+-++.++++.+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4567888888899999999999999999999999998764
No 328
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=58.42 E-value=46 Score=24.70 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=35.4
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
-....|.++.+++++.|+.++.+..++.+.+.+++++.+...
T Consensus 89 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~ 130 (482)
T 2xry_A 89 FMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGT 130 (482)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHcCCCE
Confidence 457788889999999999988888888888999999888754
No 329
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=56.23 E-value=12 Score=27.87 Aligned_cols=34 Identities=9% Similarity=0.188 Sum_probs=25.9
Q ss_pred CCCCCCCCceEEecCCCeeeccccc-CCCeEEEEE
Q 044272 4 LTIGDSVPNLQVQTNQGNFKLHDFI-GDNWTIIFS 37 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G~~~l~d~~-~~~~~vl~f 37 (133)
..+|..+|++.+...+|..++.|+. +++.++|.|
T Consensus 395 ~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~ 429 (499)
T 2qa2_A 395 PLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDI 429 (499)
T ss_dssp TTTTSBCCCCEEECSSSEEETTGGGTTCSEEEEEC
T ss_pred CCCCCCCCCCeeecCCCceeHHHHhcCCeEEEEEe
Confidence 3579999999998666677888876 456777765
No 330
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=54.76 E-value=40 Score=25.42 Aligned_cols=42 Identities=10% Similarity=0.093 Sum_probs=34.4
Q ss_pred HHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 47 TTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 47 ~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
.-.+..|.++.+++++.|+.++.+.-++.+. .+++++.+...
T Consensus 91 ~FL~~sL~dL~~~L~~lG~~L~v~~G~p~~v-~~L~~~~~a~~ 132 (506)
T 3umv_A 91 GFLLRGLRRLAADAAARHLPFFLFTGGPAEI-PALVQRLGAST 132 (506)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEESSCTTHH-HHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHHcCCceEEEecChHHH-HHHHHhcCCCE
Confidence 3457788999999999999998888788788 88999887653
No 331
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=53.02 E-value=26 Score=21.13 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=23.7
Q ss_pred hhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 55 AYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+..+.++++|+.++.+|..+.......+++.+..
T Consensus 43 ~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 43 IGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 4445556668888888877777777777777654
No 332
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=52.86 E-value=21 Score=23.38 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=25.6
Q ss_pred EEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 33 TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 33 ~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
+.|.+|+-.-||.|-.-.+.|.++.+.+ +++|....
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~p 41 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLRP 41 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEEe
Confidence 3455665777999999999999876654 56655543
No 333
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=52.28 E-value=31 Score=19.63 Aligned_cols=52 Identities=12% Similarity=-0.033 Sum_probs=31.1
Q ss_pred hhhhHHHHcCceEEEEeCCCHHHHH----HHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 55 AYVPEFDKREVKLLGLSCDDVKSHN----EWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
+..+.++....+++.++.|.++... .+++.++.+.-.+.....++....|..
T Consensus 22 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 22 ETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCGGGGTTCST
T ss_pred HHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHHCCC
Confidence 3445556556888999988654443 334555543322325667788887773
No 334
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=51.78 E-value=7 Score=29.77 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=26.2
Q ss_pred CCCCCCCCceEEecCCC-eeeccccc-CCCeEEEEE
Q 044272 4 LTIGDSVPNLQVQTNQG-NFKLHDFI-GDNWTIIFS 37 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G-~~~l~d~~-~~~~~vl~f 37 (133)
+.+|..+||+.+...+| ...|.++. .++.++|.|
T Consensus 445 ~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~ 480 (570)
T 3fmw_A 445 PWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDL 480 (570)
T ss_dssp SSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECS
T ss_pred ccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEe
Confidence 45799999999987778 48888876 456777765
No 335
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=50.48 E-value=34 Score=23.88 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=27.4
Q ss_pred eeCCCCchhHHHHHHHHhhhhHHHH-cCceEEEEeCC
Q 044272 38 HPGDFTPVCTTELGKMAAYVPEFDK-REVKLLGLSCD 73 (133)
Q Consensus 38 ~~~~~c~~C~~~~~~l~~~~~~~~~-~~v~vv~is~d 73 (133)
|...+|+.|......+.++.++++. ..+.++.+..+
T Consensus 252 f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~ 288 (350)
T 1sji_A 252 FAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD 288 (350)
T ss_dssp ECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG
T ss_pred EEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch
Confidence 4467788899899999998888874 34777776654
No 336
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=49.05 E-value=35 Score=19.42 Aligned_cols=52 Identities=8% Similarity=-0.087 Sum_probs=31.9
Q ss_pred hhhhHHHHcCceEEEEeCCCHHHHH----HHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 55 AYVPEFDKREVKLLGLSCDDVKSHN----EWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
+..+.+++...+++.++.|.+.... .+++.++.+.-.+.+...++.+..|..
T Consensus 23 ~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s~~eLG~a~G~~ 78 (101)
T 1w41_A 23 KSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRP 78 (101)
T ss_dssp HHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCCHHHHHHHhCCC
Confidence 3445555556888899988654443 345554543222236678899988873
No 337
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=48.85 E-value=37 Score=22.90 Aligned_cols=55 Identities=15% Similarity=0.221 Sum_probs=36.4
Q ss_pred HHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC---ceeeCCcHHHHHHcCCC
Q 044272 52 KMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT---PIIADPNREIIKQLNMV 106 (133)
Q Consensus 52 ~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~ 106 (133)
...+..+.++++|+.+..+|.++.......++..+... .++...+....+.++..
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred hHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 34445556677799998889888888888888877643 23333444556666664
No 338
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=48.31 E-value=62 Score=24.53 Aligned_cols=42 Identities=7% Similarity=-0.011 Sum_probs=34.2
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
-....|.++.+++++.|..++.+..++.+.+.+++++.+...
T Consensus 86 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~ 127 (543)
T 2wq7_A 86 FLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEM 127 (543)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE
Confidence 457888899999999999988887777888888888877653
No 339
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=47.33 E-value=12 Score=27.83 Aligned_cols=34 Identities=12% Similarity=0.213 Sum_probs=25.4
Q ss_pred CCCCCCCCceEEecCCCeeeccccc-CCCeEEEEE
Q 044272 4 LTIGDSVPNLQVQTNQGNFKLHDFI-GDNWTIIFS 37 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G~~~l~d~~-~~~~~vl~f 37 (133)
..+|..+|++.+...+|..++.|+. +++.++|.|
T Consensus 394 ~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~ 428 (500)
T 2qa1_A 394 PLLGKRMPALELTTATRETSSTELLHTARGVLLDL 428 (500)
T ss_dssp TTTTSBCCCCEEECSSCEEEHHHHTTTCCEEEEET
T ss_pred CcCCCCCCCCeeecCCCcEeHHHHhCCCeEEEEEe
Confidence 3579999999998666677888876 456776665
No 340
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=46.78 E-value=30 Score=21.59 Aligned_cols=40 Identities=8% Similarity=0.128 Sum_probs=29.9
Q ss_pred HHHHHhhhhHHHHcCceEEEEeCCC-HHHHHHHHHhcCCCC
Q 044272 50 LGKMAAYVPEFDKREVKLLGLSCDD-VKSHNEWIKDIEAYT 89 (133)
Q Consensus 50 ~~~l~~~~~~~~~~~v~vv~is~d~-~~~~~~~~~~~~~~~ 89 (133)
.+...++.+.++++|+.+..+|..+ ........+..+...
T Consensus 70 ~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~ 110 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR 110 (187)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT
T ss_pred chhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh
Confidence 3555566666777799999899877 677888888887753
No 341
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=45.56 E-value=38 Score=20.83 Aligned_cols=38 Identities=5% Similarity=-0.079 Sum_probs=28.1
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+.+.++.+.+++.|+.+..+|..+.+...+..+..+..
T Consensus 92 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 92 PDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred chHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 34455566677778898888888887788888877764
No 342
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=44.78 E-value=41 Score=19.82 Aligned_cols=67 Identities=15% Similarity=0.078 Sum_probs=37.2
Q ss_pred CCCeEEEEEeeCCCCchhHH------HHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHHH
Q 044272 29 GDNWTIIFSHPGDFTPVCTT------ELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIKQ 102 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~------~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 102 (133)
+|..+++.-.++.+|+.|-. ......+...++... +. -..-+++.++++.++.+.. ..++++.
T Consensus 25 kg~~~~v~~v~~~~C~~CGE~~~d~e~~~~~~~~~~e~~r~-~~---~~~~~~~~l~~~R~~~gls-------q~~la~~ 93 (133)
T 3o9x_A 25 RGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRAS-VN---AETVAPEFIVKVRKKLSLT-------QKEASEI 93 (133)
T ss_dssp TTEEEEEEEEEEEEESSSSCEECCHHHHHHHHHHHHHHHHH-HH---TTTCCHHHHHHHHHHTTCC-------HHHHHHH
T ss_pred CCEEEEECCCceeECCCCCCEeecHHHHHHHHHHHHHHHHH-Hh---hcCCCHHHHHHHHHHcCCC-------HHHHHHH
Confidence 77766665445667887743 233333332332211 00 0112467788888888864 6677777
Q ss_pred cCCC
Q 044272 103 LNMV 106 (133)
Q Consensus 103 ~~~~ 106 (133)
+|+.
T Consensus 94 ~g~s 97 (133)
T 3o9x_A 94 FGGG 97 (133)
T ss_dssp HCSC
T ss_pred HCCC
Confidence 7774
No 343
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=44.55 E-value=48 Score=20.32 Aligned_cols=42 Identities=10% Similarity=0.106 Sum_probs=29.6
Q ss_pred HHhhhhHHHHcCceEEEEeCCC---HHHHHHHHHhcCCCCceeeC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDD---VKSHNEWIKDIEAYTPIIAD 94 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~---~~~~~~~~~~~~~~~~~~~d 94 (133)
..+...+++++|..++..|--+ .....+|+++++.++..+..
T Consensus 29 ~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~ 73 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANK 73 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc
Confidence 3444555667799988777644 56778889998887766654
No 344
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=43.93 E-value=0.75 Score=19.79 Aligned_cols=11 Identities=27% Similarity=0.552 Sum_probs=8.0
Q ss_pred CCchhHHHHHH
Q 044272 42 FTPVCTTELGK 52 (133)
Q Consensus 42 ~c~~C~~~~~~ 52 (133)
.||+|+..||.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 39999876653
No 345
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=43.64 E-value=23 Score=22.56 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=28.7
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+...++.+.++++|+.+..+|..+.......+++.+..
T Consensus 89 ~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 33455566677789999888888788888888888775
No 346
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=42.42 E-value=36 Score=22.61 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=29.4
Q ss_pred EEEEEeeCCCCchhHHHHHHHHhhhhHHHH-cCceEEEEe
Q 044272 33 TIIFSHPGDFTPVCTTELGKMAAYVPEFDK-REVKLLGLS 71 (133)
Q Consensus 33 ~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~-~~v~vv~is 71 (133)
+-|.||+-.-||.|-.-.+.|.++.+.+.+ .++.|....
T Consensus 3 ~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P 42 (239)
T 3gl5_A 3 MRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRS 42 (239)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEE
T ss_pred eEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEE
Confidence 557777777899999999999998777653 356665554
No 347
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=41.98 E-value=43 Score=20.58 Aligned_cols=36 Identities=8% Similarity=0.102 Sum_probs=26.0
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+.++.+.+++.|+.+..+|..+.+......++.+..
T Consensus 89 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 89 VREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChH
Confidence 344555667778888888888777777777777765
No 348
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=41.92 E-value=49 Score=18.99 Aligned_cols=50 Identities=12% Similarity=0.036 Sum_probs=31.1
Q ss_pred hhhhHHHHcCceEEEEeCCCHH----HHHHHHHhcCCCCcee--eCCcHHHHHHcCCC
Q 044272 55 AYVPEFDKREVKLLGLSCDDVK----SHNEWIKDIEAYTPII--ADPNREIIKQLNMV 106 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~----~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~ 106 (133)
+..+.++.....++.++.|.++ .+..+++.++. |++ .+...++....|..
T Consensus 29 ~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~i--p~~~~~~s~~eLG~a~Gk~ 84 (104)
T 4a18_G 29 STIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQI--SIHHFVGSNVELGTACGKY 84 (104)
T ss_dssp HHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTC--EEEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCC--cEEEecCCHHHHHHHhCCc
Confidence 3445555556888889988533 22334444443 554 46678899998884
No 349
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=41.82 E-value=47 Score=24.25 Aligned_cols=43 Identities=16% Similarity=0.022 Sum_probs=36.2
Q ss_pred HHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 47 TTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 47 ~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
.-....|.++.+++++.|+.++.+..++.+.+.+++++++...
T Consensus 48 ~fl~~sL~~l~~~L~~~g~~l~~~~g~~~~~l~~l~~~~~~~~ 90 (420)
T 2j07_A 48 AWFLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKAKA 90 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE
Confidence 3457788899999999999988888888899999999988754
No 350
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=41.20 E-value=22 Score=20.41 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=23.8
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhc
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDI 85 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~ 85 (133)
...+...++.+.++++|+.+..+|..+........+..
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC
Confidence 44566777777777778888777765544434444444
No 351
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=40.43 E-value=55 Score=20.23 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=24.5
Q ss_pred hhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 56 YVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 56 ~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..+.++++|+.++.+|-.+.......+++.+..
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 445556678999888888777777777777764
No 352
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=40.08 E-value=10 Score=15.91 Aligned_cols=11 Identities=18% Similarity=0.241 Sum_probs=8.4
Q ss_pred eEEEECCCCcc
Q 044272 122 ALHIVGPDHQV 132 (133)
Q Consensus 122 ~~~lid~~G~i 132 (133)
++.|.|.||++
T Consensus 6 ss~IYD~~g~~ 16 (26)
T 2v2f_A 6 SSKIYDNKNQL 16 (26)
T ss_pred CCEEEeCCCCE
Confidence 46678999876
No 353
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=40.03 E-value=48 Score=20.57 Aligned_cols=35 Identities=17% Similarity=0.095 Sum_probs=24.6
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
+.++.+.++++|+.+..+|..+........+..+.
T Consensus 75 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 109 (205)
T 3m9l_A 75 AVELVRELAGRGYRLGILTRNARELAHVTLEAIGL 109 (205)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCc
Confidence 34445566677888888887777777777777665
No 354
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=39.48 E-value=13 Score=22.05 Aligned_cols=20 Identities=10% Similarity=0.218 Sum_probs=17.3
Q ss_pred CCchhHHHHHHHHhhhhHHH
Q 044272 42 FTPVCTTELGKMAAYVPEFD 61 (133)
Q Consensus 42 ~c~~C~~~~~~l~~~~~~~~ 61 (133)
.|+.|+.++.+|.+....+.
T Consensus 53 ~Cp~CR~ev~eL~~~~a~L~ 72 (108)
T 3hug_B 53 GCPECRGAVTELCGVPALLS 72 (108)
T ss_dssp TCHHHHHHHHHHTTHHHHHT
T ss_pred hCHHHHHHHHHHHHHHHHHh
Confidence 49999999999998877765
No 355
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=38.63 E-value=46 Score=20.91 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=26.4
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+.++.+.+++.|+.+..+|..+.+...+..++.+..
T Consensus 96 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 96 AVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 344556667778888888888877778888877664
No 356
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=38.16 E-value=53 Score=20.87 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=21.8
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
+.++.+.++++|+.+..+|..+........+..+.
T Consensus 88 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl 122 (222)
T 2nyv_A 88 IPYTLEALKSKGFKLAVVSNKLEELSKKILDILNL 122 (222)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 33444455566777777777666666666666664
No 357
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=37.64 E-value=57 Score=18.56 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=29.6
Q ss_pred hhHHHHcCceEEEEeCCC-HHHH---HHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 57 VPEFDKREVKLLGLSCDD-VKSH---NEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~-~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+.++.....+|.++.|. +... ..+++.++.+...+ ....++....|..
T Consensus 28 ~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~-~s~~eLG~A~Gk~ 80 (101)
T 3v7q_A 28 IKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV-ESRAVLGRSIGKE 80 (101)
T ss_dssp HHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTSS
T ss_pred HHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee-chHHHHHhhhCcc
Confidence 344554557788888874 3332 33456655554333 5567888888883
No 358
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=37.21 E-value=63 Score=18.94 Aligned_cols=50 Identities=8% Similarity=-0.053 Sum_probs=30.8
Q ss_pred hhHHHHcCceEEEEeCCCHH----HHHHHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVK----SHNEWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.+.++.....+|.|+.|.+. .+..+++.++.+...+.+...++.+..|..
T Consensus 35 ~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~Gk~ 88 (112)
T 3iz5_f 35 LKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKY 88 (112)
T ss_dssp HHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHHCTT
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHhCCc
Confidence 34445445778888888533 233456666654444435677888888884
No 359
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=37.21 E-value=34 Score=24.26 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=31.2
Q ss_pred eEEEEEeeCCCCchhHHHHHHHHhhhhHHHHc-CceEEEEeCCC
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKR-EVKLLGLSCDD 74 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~v~vv~is~d~ 74 (133)
..++.|+ ...|+.|...+..|.++.++++++ .+.++.|..+.
T Consensus 249 ~~~~~f~-~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~ 291 (367)
T 3us3_A 249 IHIVAFA-EEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDD 291 (367)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGG
T ss_pred cEEEEEE-cCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCcc
Confidence 4555565 556888888999999988888865 48888777653
No 360
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=37.10 E-value=66 Score=19.12 Aligned_cols=62 Identities=11% Similarity=0.091 Sum_probs=38.6
Q ss_pred hhHHHHcCceEEEEeCCC-H----HHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCC
Q 044272 57 VPEFDKREVKLLGLSCDD-V----KSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDH 130 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~-~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G 130 (133)
...+++...+++.|+.|. + ..+..++++++.+.. ..+...++.+..|.. ...-...|+|+++
T Consensus 40 ~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~-~v~sk~eLG~a~Gk~-----------~~vs~vaI~d~~~ 106 (122)
T 3o85_A 40 LKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYV-FIGSKNALGRACNVS-----------VPTIVASIGKHDA 106 (122)
T ss_dssp HHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEE-EESCHHHHHHHTTCS-----------SCCSEEEECCCTT
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEE-EECCHHHHHHHhCCC-----------CCEEEEEEEcccc
Confidence 344454557788888774 2 234556777666533 334577889998884 2455667777765
No 361
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=36.77 E-value=55 Score=24.39 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=35.6
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
-....|.++.+++++.|..++.+.-++.+.+.+++++++...
T Consensus 54 fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~ 95 (484)
T 1owl_A 54 YLQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEA 95 (484)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEESCHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHcCCCE
Confidence 457888899999999999988888888889999999988754
No 362
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=36.72 E-value=45 Score=20.78 Aligned_cols=38 Identities=8% Similarity=-0.008 Sum_probs=22.5
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCH---HHHHHHHHhcCCC
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDV---KSHNEWIKDIEAY 88 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~---~~~~~~~~~~~~~ 88 (133)
+.+.++.+.++++|+.+..+|-.+. +......++.+..
T Consensus 37 ~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 37 KNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 4444555556666777776764432 5666666666653
No 363
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=36.71 E-value=52 Score=22.39 Aligned_cols=43 Identities=12% Similarity=0.086 Sum_probs=34.3
Q ss_pred hHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 46 CTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 46 C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
.......|....+.+++.|++| ++..|+....-+.+.+.|.+.
T Consensus 109 v~~~~~~l~~~i~~L~~~GIrV-SLFIDpd~~qi~aA~~~GA~~ 151 (243)
T 1m5w_A 109 VAGQRDKMRDACKRLADAGIQV-SLFIDADEEQIKAAAEVGAPF 151 (243)
T ss_dssp SGGGHHHHHHHHHHHHHTTCEE-EEEECSCHHHHHHHHHTTCSE
T ss_pred HHhhHHHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHhCcCE
Confidence 4456778888888999999975 677777777888899999887
No 364
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=36.02 E-value=78 Score=19.65 Aligned_cols=13 Identities=15% Similarity=0.376 Sum_probs=8.5
Q ss_pred cceeEEEECCCCcc
Q 044272 119 PSRALHIVGPDHQV 132 (133)
Q Consensus 119 ~~p~~~lid~~G~i 132 (133)
..|++-|+ +||++
T Consensus 106 SSPS~ALf-KdGel 118 (147)
T 3fhk_A 106 SSPSMALL-KGKEV 118 (147)
T ss_dssp CSSEEEEE-ETTEE
T ss_pred CCchheee-eCCEE
Confidence 56677766 56665
No 365
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=35.97 E-value=19 Score=23.33 Aligned_cols=20 Identities=15% Similarity=0.240 Sum_probs=17.1
Q ss_pred CCchhHHHHHHHHhhhhHHH
Q 044272 42 FTPVCTTELGKMAAYVPEFD 61 (133)
Q Consensus 42 ~c~~C~~~~~~l~~~~~~~~ 61 (133)
.|+.|+.++.++.+....+-
T Consensus 34 ~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 34 LCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HCHHHHHHHHHHHHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHHh
Confidence 49999999999999876664
No 366
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=35.49 E-value=60 Score=20.97 Aligned_cols=35 Identities=6% Similarity=0.025 Sum_probs=23.6
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
..++.+.++++|+.+..+|..+.......++..+.
T Consensus 119 ~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl 153 (243)
T 2hsz_A 119 VKETLEALKAQGYILAVVTNKPTKHVQPILTAFGI 153 (243)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCc
Confidence 34445556667888877887777767777777664
No 367
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=35.45 E-value=50 Score=20.44 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=25.9
Q ss_pred hhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 56 YVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 56 ~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..+.++++|+.+..+|.++.......+++.+..
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 455667779999888888877888888888876
No 368
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=35.38 E-value=65 Score=20.52 Aligned_cols=38 Identities=11% Similarity=-0.039 Sum_probs=26.8
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+...++.+.++++|+.+..+|..+........++.+..
T Consensus 108 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 108 PDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 34455566677778888888887777777777776654
No 369
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=35.17 E-value=32 Score=25.87 Aligned_cols=31 Identities=13% Similarity=0.220 Sum_probs=23.4
Q ss_pred CCCCCCCCceEEecCCCeeecccccCCCeEEEEE
Q 044272 4 LTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFS 37 (133)
Q Consensus 4 l~~G~~~p~f~l~~~~G~~~l~d~~~~~~~vl~f 37 (133)
..+|..+|++.+. +| .++.|+.+.+.++|.|
T Consensus 450 ~~~G~r~p~~~l~--~g-~~l~d~~~~~~~ll~~ 480 (549)
T 2r0c_A 450 ARPGARAPHAWLT--PT-TSTLDLFGRGFVLLSF 480 (549)
T ss_dssp CCTTSBCCCCBSS--SS-CBGGGGCSSSEEEEEE
T ss_pred CCCCCcCCCcEeC--CC-cCHHHHcCCceEEEEc
Confidence 5689999999886 56 5777776667777765
No 370
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=35.16 E-value=64 Score=20.18 Aligned_cols=36 Identities=11% Similarity=0.023 Sum_probs=22.4
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..++.+.++++|+.+..+|..+.+......+..+..
T Consensus 101 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 101 VPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 334455556667777777776666666666665543
No 371
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=34.55 E-value=92 Score=20.03 Aligned_cols=37 Identities=5% Similarity=-0.045 Sum_probs=25.7
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
..+..++++++|+.++.+|--+.....++.+..+.+.
T Consensus 25 ~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 25 ALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC
Confidence 3344445566799988888777777777877777654
No 372
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=34.42 E-value=63 Score=24.05 Aligned_cols=43 Identities=19% Similarity=0.024 Sum_probs=35.0
Q ss_pred HHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 47 TTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 47 ~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
.-....|.++.+++++.|..++.+..++.+.+.+++++.+...
T Consensus 61 ~Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~ 103 (489)
T 1np7_A 61 NFLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKT 103 (489)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEECCHHHHHHHHHHHcCCCE
Confidence 3457888999999999999988888787888888888877653
No 373
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=34.42 E-value=66 Score=20.46 Aligned_cols=40 Identities=10% Similarity=0.063 Sum_probs=29.2
Q ss_pred HHHHHhhhhHHHHcCceEEEEeCCC---------------HHHHHHHHHhcCCCC
Q 044272 50 LGKMAAYVPEFDKREVKLLGLSCDD---------------VKSHNEWIKDIEAYT 89 (133)
Q Consensus 50 ~~~l~~~~~~~~~~~v~vv~is~d~---------------~~~~~~~~~~~~~~~ 89 (133)
.+...++.+.++++|+.+..+|..+ ...+.+.+++.+..+
T Consensus 52 ~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f 106 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL 106 (211)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce
Confidence 3556666677777899999999877 356677777777655
No 374
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=33.64 E-value=42 Score=24.32 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=30.1
Q ss_pred ceEEecCCC--ee-----ecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHH
Q 044272 12 NLQVQTNQG--NF-----KLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFD 61 (133)
Q Consensus 12 ~f~l~~~~G--~~-----~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~ 61 (133)
.+++...=| +. .+.++...+ +-|..+..||+|-.-...+.+..+--.
T Consensus 31 ~~~iMeVCG~HThaI~r~Glr~LLP~~---ieli~GPGCPVCVtp~~~ID~ai~LA~ 84 (372)
T 2z1d_A 31 EIRIMHVCGTHEDTVTRHGIRSLLPEN---VKVVSGPGCPVCITPVEDIVAMQLIMR 84 (372)
T ss_dssp CEEEEECCHHHHHHHHHTTHHHHSCTT---EEEEECCCCTTTTSCHHHHHHHHHHHH
T ss_pred ceEEEEeCCcchHHHHHhCHHhhCCCC---cEEecCCCCccEECcHHHHHHHHHHHh
Confidence 345555544 32 334444444 556679999999999988887655444
No 375
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=33.22 E-value=72 Score=18.44 Aligned_cols=51 Identities=14% Similarity=-0.106 Sum_probs=29.8
Q ss_pred hhhHHHHcCceEEEEeCCCHHHHH----HHHHhcCCCCceeeCCcHHHHHHcCCC
Q 044272 56 YVPEFDKREVKLLGLSCDDVKSHN----EWIKDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 56 ~~~~~~~~~v~vv~is~d~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
....++....++|.|+.|.+.... .+++.++.+.-.+.....++....|..
T Consensus 29 v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~G~~ 83 (110)
T 3cpq_A 29 TIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVCGKP 83 (110)
T ss_dssp HHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHTTCS
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHhCCc
Confidence 344445455778888888644433 345554443222225677888888873
No 376
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=33.18 E-value=1.4e+02 Score=21.89 Aligned_cols=64 Identities=11% Similarity=0.134 Sum_probs=39.4
Q ss_pred CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHH------hcCCCCceeeCCc
Q 044272 29 GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIK------DIEAYTPIIADPN 96 (133)
Q Consensus 29 ~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~------~~~~~~~~~~d~~ 96 (133)
++.++.+.-...+-..--.....++.+ +.+.|..+|=|+..+.+...++.+ ..+.+.|++.|-.
T Consensus 20 G~~PI~VQSMtnT~T~Dv~aTv~QI~~----L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~~~vPLVADiH 89 (406)
T 4g9p_A 20 GAHPIAVQSMTNTPTRDVEATTAQVLE----LHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFH 89 (406)
T ss_dssp TTSCCEEEEECCSCTTCHHHHHHHHHH----HHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred CCCceeeeecCCCCcccHHHHHHHHHH----HHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcCCCCceEeeec
Confidence 456888876544433333334444444 345699999999988776655432 3345669999843
No 377
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=33.14 E-value=75 Score=19.98 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=21.3
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
..++.+.++++|+.+..+|..+........+..+.
T Consensus 100 ~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 134 (232)
T 1zrn_A 100 VPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGL 134 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcCh
Confidence 33444555666777777776666666666666554
No 378
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=33.11 E-value=29 Score=21.73 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=28.2
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
+.++.+.++++|+.+..+|..+........+..+...
T Consensus 80 ~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 116 (217)
T 3m1y_A 80 ALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA 116 (217)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch
Confidence 4455666777889998898887888888888887653
No 379
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=33.11 E-value=56 Score=20.69 Aligned_cols=35 Identities=6% Similarity=-0.068 Sum_probs=24.0
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
+.++.+.++++|+.+..+|..+........+..+.
T Consensus 109 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 143 (237)
T 4ex6_A 109 VLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGL 143 (237)
T ss_dssp HHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTG
T ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCc
Confidence 33445566667888888887777777777776665
No 380
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=32.93 E-value=57 Score=24.63 Aligned_cols=42 Identities=21% Similarity=0.079 Sum_probs=35.1
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
-....|.++.+++++.|..++.+..++.+.+.+++++.+...
T Consensus 97 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~~~~~~~ 138 (525)
T 2j4d_A 97 FLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGART 138 (525)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHcCCCE
Confidence 457888899999999999988888888888889999888754
No 381
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=32.45 E-value=26 Score=19.07 Aligned_cols=35 Identities=11% Similarity=0.061 Sum_probs=20.8
Q ss_pred CeeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhh
Q 044272 20 GNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYV 57 (133)
Q Consensus 20 G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~ 57 (133)
|.+.+-++ .+..+.|-+ .+. |..|......+.+..
T Consensus 26 Gdvelv~v-~~g~V~v~l-~Ga-C~gc~Tlk~gIe~~L 60 (74)
T 1th5_A 26 GGLQFLMI-KGPIVKVRL-TGP-AAVVRTVRIAVSKKL 60 (74)
T ss_dssp CCCCCCEE-ETTEEEECC-CSS-SSSSSSHHHHHHHHH
T ss_pred CcEEEEEE-eCCEEEEEE-ecC-CcchHHHHHHHHHHH
Confidence 46888888 455454444 466 778955444554433
No 382
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=32.38 E-value=96 Score=19.58 Aligned_cols=21 Identities=5% Similarity=0.045 Sum_probs=13.1
Q ss_pred HHhhhhHHHHcCceEEEEeCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d 73 (133)
+.+..+.+++.|+.|.+|...
T Consensus 128 ~~~~~~~~~~~~i~v~~igig 148 (218)
T 3ibs_A 128 AVEAAKAAAEKGIQVSVLGVG 148 (218)
T ss_dssp HHHHHHHHHTTTEEEEEEEES
T ss_pred HHHHHHHHHhcCCEEEEEEec
Confidence 344455566678887777654
No 383
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=32.03 E-value=43 Score=21.20 Aligned_cols=35 Identities=6% Similarity=0.031 Sum_probs=25.4
Q ss_pred HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 54 AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 54 ~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.++.+.++++|+.+..+|..+.....+..+..+..
T Consensus 109 ~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 109 IELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch
Confidence 34456667778888888877777777777777754
No 384
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=31.78 E-value=74 Score=20.73 Aligned_cols=38 Identities=8% Similarity=0.015 Sum_probs=28.6
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+...+..+.+++.|+.+..+|.++.......++..+..
T Consensus 147 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 184 (280)
T 3skx_A 147 PESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD 184 (280)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred HhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh
Confidence 44455556667778999888888888888888887764
No 385
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=31.69 E-value=88 Score=18.96 Aligned_cols=47 Identities=4% Similarity=0.004 Sum_probs=28.9
Q ss_pred hHHHHcCceEEEEeCCCHH-----HHHHHHHhcCCCCceeeCCcHHHHHHcCC
Q 044272 58 PEFDKREVKLLGLSCDDVK-----SHNEWIKDIEAYTPIIADPNREIIKQLNM 105 (133)
Q Consensus 58 ~~~~~~~v~vv~is~d~~~-----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (133)
..++....++|.|+.|... .+...+++++.+.-++ +...++.+..|.
T Consensus 42 kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v-~sk~eLG~a~G~ 93 (134)
T 2ale_A 42 KTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV-PSRVALGRACGV 93 (134)
T ss_dssp HHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEE-SCHHHHHHHTTC
T ss_pred HHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEE-CCHHHHHHHhCC
Confidence 3444445777777776322 3456677777654343 556778888777
No 386
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=31.20 E-value=57 Score=22.65 Aligned_cols=43 Identities=12% Similarity=0.091 Sum_probs=33.5
Q ss_pred hHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 46 CTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 46 C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
+......|....+.+++.|++| ++..|+....-+.+.+.|.+.
T Consensus 137 v~~~~~~L~~~i~~L~~~GIrV-SLFIDpd~~qI~aA~~~GAd~ 179 (278)
T 3gk0_A 137 VVGHFDAVRAACKQLADAGVRV-SLFIDPDEAQIRAAHETGAPV 179 (278)
T ss_dssp TTTTHHHHHHHHHHHHHTTCEE-EEEECSCHHHHHHHHHHTCSE
T ss_pred hhccHHHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHhCcCE
Confidence 3456677888888899999974 666677777888888888876
No 387
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=30.82 E-value=56 Score=20.63 Aligned_cols=27 Identities=15% Similarity=0.160 Sum_probs=16.0
Q ss_pred hhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 55 AYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
+..+..+++|+.+|+|+......+.++
T Consensus 131 ~~~~~ak~~g~~vI~IT~~~~s~La~~ 157 (199)
T 1x92_A 131 QAIQAAHDREMLVVALTGRDGGGMASL 157 (199)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCCcHHhc
Confidence 334445666788888877544444444
No 388
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=30.49 E-value=92 Score=18.81 Aligned_cols=61 Identities=11% Similarity=0.087 Sum_probs=36.7
Q ss_pred hHHHHcCceEEEEeCCC--H---HHHHHHHHhcCCCCceeeCCcHHHHHHcCCCCCCCCCCCCCCccceeEEEECCCC
Q 044272 58 PEFDKREVKLLGLSCDD--V---KSHNEWIKDIEAYTPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDH 130 (133)
Q Consensus 58 ~~~~~~~v~vv~is~d~--~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G 130 (133)
+.++....+++.++.|. . ..+..++++++.+...+ ....++.+..|.. ...-+.-|+|+++
T Consensus 51 kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v-~sk~eLG~a~G~~-----------~~v~~vaI~d~~~ 116 (135)
T 2aif_A 51 KALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFV-RSKVALGRACGVS-----------RPVIAAAITSKDG 116 (135)
T ss_dssp HHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEE-SCHHHHHHHTTCS-----------SCCSEEEEECCTT
T ss_pred HHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEE-CCHHHHHHHhCCC-----------CcEEEEEEEcCCc
Confidence 33444457788888763 2 23445666666654333 5677888888884 2344566777765
No 389
>3vi6_A 60S ribosomal protein L30; three-layer alpha/beta/ALPA; 1.59A {Homo sapiens} PDB: 2zkr_6 1ysh_C
Probab=30.31 E-value=90 Score=18.64 Aligned_cols=50 Identities=12% Similarity=-0.044 Sum_probs=27.2
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHH----HhcCCCCceeeCCcHHHHHHcCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWI----KDIEAYTPIIADPNREIIKQLNMV 106 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~ 106 (133)
.++++...+.+|.|+.|.++...+-. ...+.+.+++.....++....|..
T Consensus 36 ~kaIr~gkakLVIiA~Das~~~~~ki~~~~~~~~~~V~~~~~sk~eLG~A~Gk~ 89 (125)
T 3vi6_A 36 LKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKY 89 (125)
T ss_dssp HHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCHHHHHHHTTCS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhCCCcEEEcCCHHHHHHHhCCc
Confidence 34444445777778877544333322 222323244455667788888774
No 390
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=29.95 E-value=73 Score=19.98 Aligned_cols=35 Identities=11% Similarity=-0.008 Sum_probs=23.0
Q ss_pred HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 54 AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 54 ~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.++.+.++++|+.+..+|..+........+..+..
T Consensus 105 ~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 105 VPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp HHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCT
T ss_pred HHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcH
Confidence 34455566667887777777776666666666653
No 391
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=29.93 E-value=38 Score=21.15 Aligned_cols=29 Identities=7% Similarity=-0.042 Sum_probs=17.6
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
+.+..+..+++|+.+|+|+......+.++
T Consensus 95 ~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ 123 (186)
T 1m3s_A 95 LIHTAAKAKSLHGIVAALTINPESSIGKQ 123 (186)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCchHHh
Confidence 33444555677888888887544444443
No 392
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=29.65 E-value=96 Score=18.94 Aligned_cols=37 Identities=11% Similarity=0.161 Sum_probs=25.3
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+.+.++.+.++++| .+..+|..+........+..+..
T Consensus 89 ~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 89 PEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp HHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 45556666667778 88778877777667676766643
No 393
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=29.61 E-value=51 Score=20.35 Aligned_cols=36 Identities=8% Similarity=0.105 Sum_probs=26.9
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..++.+.++++|+.+..+|...........+..+..
T Consensus 87 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 87 IKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCC
Confidence 344556667778998888887777778888887774
No 394
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=29.53 E-value=67 Score=20.10 Aligned_cols=34 Identities=9% Similarity=-0.099 Sum_probs=26.4
Q ss_pred hhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 56 YVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 56 ~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
..+.++++|+.+..+|.++.....+.+++.+...
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~ 87 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH 87 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH
Confidence 4556677899999999888888888888877653
No 395
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=29.27 E-value=72 Score=20.30 Aligned_cols=33 Identities=12% Similarity=-0.111 Sum_probs=24.5
Q ss_pred EEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEE
Q 044272 35 IFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGL 70 (133)
Q Consensus 35 l~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~i 70 (133)
|.||+-.-||.|-.-.+.|.++.+.+ ++.|...
T Consensus 7 I~~~~D~~cPwcyi~~~~l~~~~~~~---~~~v~~~ 39 (202)
T 3fz5_A 7 IEFWFDFSSGYAFFAAQRIEALAAEL---GRTVLWR 39 (202)
T ss_dssp EEEEECTTCHHHHHHHTTHHHHHHHH---TCCEEEE
T ss_pred eEEEEeCCCHHHHHHHHHHHHHHHHh---CCeEEEE
Confidence 55666777999999999999887765 4554443
No 396
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=29.04 E-value=59 Score=20.11 Aligned_cols=40 Identities=8% Similarity=-0.042 Sum_probs=28.7
Q ss_pred HHHHHhhhhHHHHcCceEEEEeCC---------------CHHHHHHHHHhcCCCC
Q 044272 50 LGKMAAYVPEFDKREVKLLGLSCD---------------DVKSHNEWIKDIEAYT 89 (133)
Q Consensus 50 ~~~l~~~~~~~~~~~v~vv~is~d---------------~~~~~~~~~~~~~~~~ 89 (133)
.+...++.+.++++|+.+..+|.. ....+...+++.+..+
T Consensus 44 ~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f 98 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF 98 (176)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe
Confidence 455666666777789998888876 3556667788878766
No 397
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=29.02 E-value=62 Score=20.19 Aligned_cols=32 Identities=3% Similarity=-0.024 Sum_probs=21.9
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.+.+++.|+.++.+|..+.......+++.+..
T Consensus 62 l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~ 93 (188)
T 2r8e_A 62 IRCALTSDIEVAIITGRKAKLVEDRCATLGIT 93 (188)
T ss_dssp HHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred HHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc
Confidence 44455668888888877766667777776654
No 398
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=28.73 E-value=25 Score=20.05 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=18.7
Q ss_pred CeeecccccCCCeEEEEEeeCCCCchhHHHHHHHH
Q 044272 20 GNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMA 54 (133)
Q Consensus 20 G~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~ 54 (133)
|.+.|-++ .+..+.|- +.+. |..|....-.|.
T Consensus 35 Gdvelv~v-~~g~V~v~-l~Ga-C~gC~ss~~Tlk 66 (92)
T 1veh_A 35 GDVIYRGF-EDGIVRLK-LQGS-CTSCPSSIITLK 66 (92)
T ss_dssp CCCCEEEE-ETTEEEEC-CCCC-CCCCHHHHHHTH
T ss_pred CeEEEEEE-eCCEEEEE-Eeec-CCCCCCcHHHHH
Confidence 47888888 44544444 4465 556665555554
No 399
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=28.69 E-value=1.1e+02 Score=20.94 Aligned_cols=58 Identities=12% Similarity=0.178 Sum_probs=29.1
Q ss_pred CCceEEecCCC---eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCce-EEEE
Q 044272 10 VPNLQVQTNQG---NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVK-LLGL 70 (133)
Q Consensus 10 ~p~f~l~~~~G---~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~-vv~i 70 (133)
+|.|-..+..| ++....+ +|+.+++.. +....+....+.........++..|++ +|.+
T Consensus 57 ~p~fp~~tv~gh~~~~~~G~l-~G~~V~~~~--G~gh~~~~~~v~~~~a~i~~l~~lGv~~iI~t 118 (268)
T 1g2o_A 57 LPGFVPPTAAGHAGELLSVPI-GAHRVLVLA--GRIHAYEGHDLRYVVHPVRAARAAGAQIMVLT 118 (268)
T ss_dssp STTCCCCCSTTCCCEEEEEEE-TTEEEEEEE--CCCCGGGTCCHHHHSHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCcccCCCCeEEEEEE-CCEEEEEEE--CCCcCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 45555544444 5777777 777776663 654433322222222223344555666 4443
No 400
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=28.54 E-value=38 Score=21.16 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=14.8
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHH
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNE 80 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~ 80 (133)
+.+..+..+++|+.+++|+......+.+
T Consensus 103 ~~~~~~~ak~~g~~vi~IT~~~~s~l~~ 130 (187)
T 3sho_A 103 TVAALAGAAERGVPTMALTDSSVSPPAR 130 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCcchh
Confidence 3333444455677777777644333333
No 401
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=28.07 E-value=98 Score=23.18 Aligned_cols=41 Identities=17% Similarity=0.078 Sum_probs=34.1
Q ss_pred HHHHHHhhhhHHHHcCceEEEEeC-CCHHHHHHHHHhcCCCC
Q 044272 49 ELGKMAAYVPEFDKREVKLLGLSC-DDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 49 ~~~~l~~~~~~~~~~~v~vv~is~-d~~~~~~~~~~~~~~~~ 89 (133)
....|.++.+++++.|..++.+.. ++.+.+.+++++++...
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~~g~~~~~l~~l~~~~~~~~ 104 (509)
T 1u3d_A 63 LKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQ 104 (509)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHcCCCE
Confidence 578899999999999999888764 66788899999988764
No 402
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=28.04 E-value=88 Score=20.56 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=26.1
Q ss_pred EEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 33 TIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 33 ~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
..|.||+-.-||.|-.-.+.|.++.+.+ ++.|....
T Consensus 6 ~~I~~~~D~~CPwcyi~~~~L~~~~~~~---~v~v~~~p 41 (234)
T 3rpp_A 6 RTVELFYDVLSPYSWLGFEILCRYQNIW---NINLQLRP 41 (234)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEEE
T ss_pred ceEEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEEE
Confidence 4566777778999999999998876654 55554443
No 403
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=27.92 E-value=38 Score=21.68 Aligned_cols=26 Identities=12% Similarity=0.026 Sum_probs=14.4
Q ss_pred hhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 56 YVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 56 ~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
..+..+++|+.+|+|+......+.++
T Consensus 108 ~~~~ak~~g~~vI~IT~~~~s~La~~ 133 (200)
T 1vim_A 108 ISKKAKDIGSKLVAVTGKRDSSLAKM 133 (200)
T ss_dssp HHHHHHHHTCEEEEEESCTTSHHHHH
T ss_pred HHHHHHHCCCeEEEEECCCCChHHHh
Confidence 33344556788888876543334333
No 404
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=27.91 E-value=77 Score=19.93 Aligned_cols=33 Identities=0% Similarity=-0.000 Sum_probs=24.0
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
.+.++++|+.+..+|.++.......+++.+...
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~ 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc
Confidence 445566788888888877777777777777653
No 405
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=27.86 E-value=53 Score=20.95 Aligned_cols=40 Identities=5% Similarity=0.105 Sum_probs=29.0
Q ss_pred HHHHHhhhhHHHHcCceEEEEeCCCH---------------HHHHHHHHhcCCCC
Q 044272 50 LGKMAAYVPEFDKREVKLLGLSCDDV---------------KSHNEWIKDIEAYT 89 (133)
Q Consensus 50 ~~~l~~~~~~~~~~~v~vv~is~d~~---------------~~~~~~~~~~~~~~ 89 (133)
.+...+..+.++++|+.++.+|-.+. +.+.+..++.+..+
T Consensus 58 ~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 112 (218)
T 2o2x_A 58 RPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV 112 (218)
T ss_dssp CGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCce
Confidence 45555666667778999998988765 56777788877654
No 406
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=27.74 E-value=91 Score=19.85 Aligned_cols=36 Identities=11% Similarity=-0.049 Sum_probs=21.4
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..++.+.++++|+.+..+|..+........+..+..
T Consensus 99 ~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 99 ARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp HHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 334445555667777777766665555666665543
No 407
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=27.66 E-value=75 Score=19.02 Aligned_cols=33 Identities=3% Similarity=-0.051 Sum_probs=24.7
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
.+.++++|+.+..+|..+.......+++.+...
T Consensus 40 l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~ 72 (164)
T 3e8m_A 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY 72 (164)
T ss_dssp HHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE
Confidence 455566788888888887777777888877653
No 408
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=27.59 E-value=27 Score=25.68 Aligned_cols=17 Identities=29% Similarity=0.852 Sum_probs=14.4
Q ss_pred CCCchhHHHHHHHHhhh
Q 044272 41 DFTPVCTTELGKMAAYV 57 (133)
Q Consensus 41 ~~c~~C~~~~~~l~~~~ 57 (133)
.+|++|+..+.++.+++
T Consensus 389 ~Fc~VCr~aI~~~i~fy 405 (407)
T 3p1v_A 389 EFCPVCQRAIRRMIEFY 405 (407)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhc
Confidence 48999999999888764
No 409
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=27.50 E-value=1e+02 Score=23.83 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=27.5
Q ss_pred hhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 55 AYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
+..+++++.|++++.+|-|+.......+++.+...
T Consensus 464 ~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~ 498 (645)
T 3j08_A 464 PAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL 498 (645)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE
Confidence 33445566799999999999998888888888753
No 410
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=27.23 E-value=1.3e+02 Score=21.60 Aligned_cols=40 Identities=3% Similarity=-0.029 Sum_probs=31.9
Q ss_pred HHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 49 ELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 49 ~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..|.+.++.+.++++|+.+..+|..+........++++..
T Consensus 216 l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~ 255 (384)
T 1qyi_A 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255 (384)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred cCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh
Confidence 4677888888888889999888888877777777777753
No 411
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=27.19 E-value=99 Score=18.09 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=39.2
Q ss_pred EEEEeeCCCCc------hhHHHHHHHHhhhhHHHHcCceEEEEeC--CC-----HHHHHHHHHhcCCCC
Q 044272 34 IIFSHPGDFTP------VCTTELGKMAAYVPEFDKREVKLLGLSC--DD-----VKSHNEWIKDIEAYT 89 (133)
Q Consensus 34 vl~f~~~~~c~------~C~~~~~~l~~~~~~~~~~~v~vv~is~--d~-----~~~~~~~~~~~~~~~ 89 (133)
+-+|=++-||+ --..++-++....+.++++|+.|-=.+. ++ ...+.++++++|...
T Consensus 7 i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~ 75 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADA 75 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGG
T ss_pred EEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCccc
Confidence 34566888888 3356788888888888888877655554 33 245678888887755
No 412
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=27.16 E-value=80 Score=20.35 Aligned_cols=35 Identities=9% Similarity=-0.119 Sum_probs=24.9
Q ss_pred HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 54 AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 54 ~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.++.+.++++|+.+..+|..+.....+..+..+..
T Consensus 116 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 116 AETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp HHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 34455566678888888887777777777776654
No 413
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=26.77 E-value=82 Score=18.38 Aligned_cols=14 Identities=29% Similarity=0.247 Sum_probs=9.3
Q ss_pred cceeEEEECCCCcc
Q 044272 119 PSRALHIVGPDHQV 132 (133)
Q Consensus 119 ~~p~~~lid~~G~i 132 (133)
..+..+|.|.+|++
T Consensus 48 ~~~~lrI~D~~G~v 61 (106)
T 3fn2_A 48 GRGYVRITDKDGQV 61 (106)
T ss_dssp TTCEEEEECTTSCB
T ss_pred cCCcEEEEcCCCCE
Confidence 45667777777765
No 414
>3e20_C Eukaryotic peptide chain release factor subunit 1; SUP35, SUP45, translation termination, peptide release, GTP- nucleotide-binding; 3.50A {Schizosaccharomyces pombe}
Probab=26.75 E-value=37 Score=25.18 Aligned_cols=36 Identities=8% Similarity=0.028 Sum_probs=18.2
Q ss_pred CCchhHHHHH-----HHH-hhhhHHHHcCceEEEEeCCCHHH
Q 044272 42 FTPVCTTELG-----KMA-AYVPEFDKREVKLLGLSCDDVKS 77 (133)
Q Consensus 42 ~c~~C~~~~~-----~l~-~~~~~~~~~~v~vv~is~d~~~~ 77 (133)
-||.|-..+. .+. ++.+..++.|.+|..||.++++-
T Consensus 365 ~c~~~g~~~~~~e~~~~ve~l~e~a~~~G~~v~~vs~~~~eG 406 (441)
T 3e20_C 365 LDKDTGAEMELVSSMLLSEWLAEHYKDYGANLEFVSDRSQEG 406 (441)
T ss_dssp ------------CCEEHHHHHHHHGGGGSCCEEEECTTSHHH
T ss_pred cCcccCccceecchhhHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence 3777776553 333 35666677789999999887653
No 415
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=26.73 E-value=1.1e+02 Score=19.03 Aligned_cols=36 Identities=8% Similarity=0.102 Sum_probs=22.4
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
+.++.+.+++.|+.+..+|..+........+..+..
T Consensus 89 ~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 89 VREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC
Confidence 344555566667777777766666666666665554
No 416
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=26.62 E-value=40 Score=20.94 Aligned_cols=13 Identities=15% Similarity=0.284 Sum_probs=7.2
Q ss_pred HHcCceEEEEeCC
Q 044272 61 DKREVKLLGLSCD 73 (133)
Q Consensus 61 ~~~~v~vv~is~d 73 (133)
+++|+.+++|+..
T Consensus 120 k~~g~~vi~IT~~ 132 (183)
T 2xhz_A 120 KRLHVPLICITGR 132 (183)
T ss_dssp HTTTCCEEEEESC
T ss_pred HHCCCCEEEEECC
Confidence 4445666666554
No 417
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=26.60 E-value=57 Score=22.63 Aligned_cols=38 Identities=8% Similarity=-0.077 Sum_probs=29.9
Q ss_pred HHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 52 KMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 52 ~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
...++.+.++++|+.+..+|..........+++.+...
T Consensus 183 g~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~ 220 (317)
T 4eze_A 183 GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY 220 (317)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe
Confidence 34455667788899999999888888888888888754
No 418
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=26.58 E-value=39 Score=21.45 Aligned_cols=31 Identities=13% Similarity=0.286 Sum_probs=20.1
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCHHHHHHH
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~ 81 (133)
+++.+..+..+++|+.+|+|+......+.++
T Consensus 106 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ 136 (201)
T 3fxa_A 106 GELLNLIPACKTKGSTLIGVTENPDSVIAKE 136 (201)
T ss_dssp HHHHTTHHHHHHHTCEEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEECCCCChhHHh
Confidence 3455555666777899999987654444444
No 419
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=26.54 E-value=60 Score=20.65 Aligned_cols=34 Identities=9% Similarity=-0.016 Sum_probs=23.7
Q ss_pred hhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 55 AYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
++.+.++++|+.+..+|..+.....+..+..+..
T Consensus 117 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (240)
T 3sd7_A 117 EILEMLYKNGKILLVATSKPTVFAETILRYFDID 150 (240)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH
Confidence 4455566778888888877777777777776654
No 420
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=26.21 E-value=23 Score=20.57 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=10.1
Q ss_pred eEEEECCCCccC
Q 044272 122 ALHIVGPDHQVQ 133 (133)
Q Consensus 122 ~~~lid~~G~i~ 133 (133)
.+.|||++|+|+
T Consensus 50 rItiiD~~G~Vl 61 (122)
T 3cwf_A 50 SASVIDTDGKVL 61 (122)
T ss_dssp EEEEEETTSCEE
T ss_pred EEEEECCCCcEE
Confidence 688899999874
No 421
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=26.02 E-value=1.2e+02 Score=18.64 Aligned_cols=32 Identities=6% Similarity=-0.042 Sum_probs=19.2
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.+.+++.|+.++.+|..+........+..+..
T Consensus 103 l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 134 (226)
T 1te2_A 103 VALCKEQGLLVGLASASPLHMLEKVLTMFDLR 134 (226)
T ss_dssp HHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred HHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcH
Confidence 34445556777777766666566666665543
No 422
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=26.01 E-value=86 Score=19.94 Aligned_cols=33 Identities=6% Similarity=0.049 Sum_probs=25.6
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
.+.++++|+.+..+|.++.....+.+++.+...
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~ 93 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISL 93 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE
Confidence 455667799998899888888888888887653
No 423
>3twl_A Formamidopyrimidine-DNA glycosylase 1; helix two turns helix, zinc-LESS finger, hydrolase, DNA DAMA repair, DNA-binding, glycosidase, lyase; 1.70A {Arabidopsis thaliana} PDB: 3twm_A* 3twk_A
Probab=25.69 E-value=8.4 Score=27.18 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=10.8
Q ss_pred CCCCchhHHHHHHHHhh
Q 044272 40 GDFTPVCTTELGKMAAY 56 (133)
Q Consensus 40 ~~~c~~C~~~~~~l~~~ 56 (133)
+.|||.|+...+.-...
T Consensus 269 t~~CP~CQ~~~~~~~~~ 285 (310)
T 3twl_A 269 TAYVPELQKLYGKDAEK 285 (310)
T ss_dssp --ECTTTCCCCHHHHHH
T ss_pred cEECCCCcCCCCCCcch
Confidence 45699999876655443
No 424
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=25.61 E-value=88 Score=17.98 Aligned_cols=21 Identities=10% Similarity=0.064 Sum_probs=13.0
Q ss_pred CceEEEEeCCCHHHHHHHHHh
Q 044272 64 EVKLLGLSCDDVKSHNEWIKD 84 (133)
Q Consensus 64 ~v~vv~is~d~~~~~~~~~~~ 84 (133)
+..-+++.+++.+.+.++.++
T Consensus 71 ~~~~l~f~v~~~~dv~~~~~~ 91 (138)
T 2a4x_A 71 HRFAIAFEFPDTASVDKKYAE 91 (138)
T ss_dssp CSEEEEEECSSHHHHHHHHHH
T ss_pred CeEEEEEEeCCHHHHHHHHHH
Confidence 566788888855555444333
No 425
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=25.48 E-value=41 Score=19.30 Aligned_cols=13 Identities=8% Similarity=0.526 Sum_probs=10.2
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
....++.||+|.+
T Consensus 110 ~~~~~~~DPdGn~ 122 (135)
T 3rri_A 110 HETFFLIDPSNNL 122 (135)
T ss_dssp EEEEEEECTTCCE
T ss_pred eEEEEEECCCCCE
Confidence 4578889999975
No 426
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=25.48 E-value=29 Score=21.33 Aligned_cols=14 Identities=7% Similarity=0.010 Sum_probs=11.8
Q ss_pred ceeEEEECCCCccC
Q 044272 120 SRALHIVGPDHQVQ 133 (133)
Q Consensus 120 ~p~~~lid~~G~i~ 133 (133)
-+..||+|.+|+|+
T Consensus 55 ~~r~~l~d~eG~Il 68 (138)
T 3v67_A 55 RPRVFFSDYNGNVL 68 (138)
T ss_dssp SCEEEEECTTSCEE
T ss_pred CccEEEEcCCCCEe
Confidence 46899999999884
No 427
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=25.26 E-value=29 Score=19.15 Aligned_cols=14 Identities=29% Similarity=0.328 Sum_probs=11.3
Q ss_pred cceeEEEECCCCcc
Q 044272 119 PSRALHIVGPDHQV 132 (133)
Q Consensus 119 ~~p~~~lid~~G~i 132 (133)
..--.|.||++|+|
T Consensus 26 ~V~v~~~i~~~G~v 39 (90)
T 1u07_A 26 QVKVKFDVTPDGRV 39 (90)
T ss_dssp EEEEEEEECTTSCE
T ss_pred EEEEEEEECCCCCE
Confidence 45577899999987
No 428
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=25.17 E-value=48 Score=19.48 Aligned_cols=29 Identities=7% Similarity=0.088 Sum_probs=23.0
Q ss_pred ceEEEEeCCCHHHHHHHHHhcCCCCceee
Q 044272 65 VKLLGLSCDDVKSHNEWIKDIEAYTPIIA 93 (133)
Q Consensus 65 v~vv~is~d~~~~~~~~~~~~~~~~~~~~ 93 (133)
.+=+-+..++.|+..+|++++|..+.+.-
T Consensus 51 ~~qv~L~F~skE~AiayAek~G~~y~V~e 79 (106)
T 2jya_A 51 KQQVKLTFETQEQAEAYAQRKGIEYRVIL 79 (106)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTCEEEECC
T ss_pred cccceEecCCHHHHHHHHHHcCCEEEEeC
Confidence 33456888999999999999999875443
No 429
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=30.93 E-value=15 Score=24.67 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=29.7
Q ss_pred HHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 49 ELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 49 ~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..+...+..+.+++.|+.+..+|.++.......+++.+..
T Consensus 137 ~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 176 (263)
T 2yj3_A 137 PRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ 176 (263)
Confidence 4566666777778889999888888777777777776653
No 430
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=24.99 E-value=77 Score=19.95 Aligned_cols=19 Identities=11% Similarity=-0.137 Sum_probs=13.1
Q ss_pred EeeCCCCchhHHHHHHHHh
Q 044272 37 SHPGDFTPVCTTELGKMAA 55 (133)
Q Consensus 37 f~~~~~c~~C~~~~~~l~~ 55 (133)
.|....||.|++..--|.+
T Consensus 6 LY~~~~sP~~~rvr~~L~e 24 (210)
T 4hoj_A 6 LYSGITCPFSHRCRFVLYE 24 (210)
T ss_dssp EEECTTCHHHHHHHHHHHH
T ss_pred EecCCCChHHHHHHHHHHH
Confidence 3456779999987655554
No 431
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=24.97 E-value=47 Score=21.93 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=10.8
Q ss_pred eEEEEEeeCCCCchhHHHHHHHH
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMA 54 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~ 54 (133)
+-|..|.+-+-|+.|...+.++-
T Consensus 100 Y~vTwy~SWSPC~~CA~~v~~FL 122 (203)
T 3v4k_A 100 YRVTCFTSWSPCFSCAQEMAKFI 122 (203)
T ss_pred EEEEEEEeCCChHHHHHHHHHHH
Confidence 33443332233666665555544
No 432
>1x52_A Pelota homolog, CGI-17; ERF1_3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.79.3.2
Probab=24.83 E-value=1.2e+02 Score=18.11 Aligned_cols=31 Identities=10% Similarity=-0.012 Sum_probs=23.5
Q ss_pred hHHHHHHHHhhhhHHHHcCceEEEEeCCCHH
Q 044272 46 CTTELGKMAAYVPEFDKREVKLLGLSCDDVK 76 (133)
Q Consensus 46 C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~ 76 (133)
|...-..+.++.+..++.|.+|..||.++.+
T Consensus 69 d~~~~~~~~el~e~~~~~G~~V~ivs~~~~~ 99 (124)
T 1x52_A 69 DVATRSRYVRLVDSVKENAGTVRIFSSLHVS 99 (124)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEECSSSHH
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEECCCCcc
Confidence 5455566666777788889999999998655
No 433
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=24.58 E-value=74 Score=24.18 Aligned_cols=41 Identities=10% Similarity=0.050 Sum_probs=31.9
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
-....|.++.+++++.|..++...-++.+.+.+++++++..
T Consensus 65 Fl~~sL~~L~~~L~~~G~~L~v~~G~~~~vl~~L~~~~~~~ 105 (537)
T 3fy4_A 65 FLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVK 105 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEESCHHHHHHHHHTTSCEE
T ss_pred HHHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHHHcCCC
Confidence 45678888889999999888777777777777777776654
No 434
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=24.57 E-value=1.5e+02 Score=19.25 Aligned_cols=62 Identities=11% Similarity=0.079 Sum_probs=35.2
Q ss_pred HHhhhhHHHHcCceEEEEeCC------CHHHHHHHHHhcCCCCceeeCCcH--HHHHHcCCCCCCCCCCCCCCccceeEE
Q 044272 53 MAAYVPEFDKREVKLLGLSCD------DVKSHNEWIKDIEAYTPIIADPNR--EIIKQLNMVDPDEKDSSGKQLPSRALH 124 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d------~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~ 124 (133)
|.+..+.+++.|..+ .|..| ..+..-+|.+..+.+ -+++-... ..++.+|+ ..++..|
T Consensus 45 L~~iv~~ik~~gK~v-ivh~DlI~GLs~d~~ai~fL~~~~pd-GIIsTk~~~i~~Akk~GL------------~tIqR~F 110 (188)
T 1vkf_A 45 LKFHLKILKDRGKTV-FVDMDFVNGLGEGEEAILFVKKAGAD-GIITIKPKNYVVAKKNGI------------PAVLRFF 110 (188)
T ss_dssp HHHHHHHHHHTTCEE-EEEGGGEETCCSSHHHHHHHHHHTCS-EEEESCHHHHHHHHHTTC------------CEEEEEE
T ss_pred HHHHHHHHHHCCCeE-EEecCcccccCCCHHHHHHHHhcCCC-EEEcCcHHHHHHHHHcCC------------EEeeEEE
Confidence 444445566555332 33332 235666788444443 33333222 45678888 5899999
Q ss_pred EECC
Q 044272 125 IVGP 128 (133)
Q Consensus 125 lid~ 128 (133)
++|.
T Consensus 111 liDs 114 (188)
T 1vkf_A 111 ALDS 114 (188)
T ss_dssp CCSH
T ss_pred EEEe
Confidence 9985
No 435
>1sk4_A Peptidoglycan recognition protein I-alpha; alpha/beta MIX, immune system; 1.65A {Homo sapiens} SCOP: d.118.1.1 PDB: 2aph_A* 1sk3_A* 1twq_A* 2eav_A 2eax_A*
Probab=24.49 E-value=22 Score=22.35 Aligned_cols=13 Identities=31% Similarity=0.291 Sum_probs=10.1
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 62 igyhflI~~dG~I 74 (163)
T 1sk4_A 62 IGYHFLVGQDGGV 74 (163)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCceEEECCCCEE
Confidence 4467888888887
No 436
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.48 E-value=1.5e+02 Score=19.26 Aligned_cols=63 Identities=17% Similarity=0.115 Sum_probs=35.9
Q ss_pred HHhhhhHHHHcCceEEEEeCC------CHHHHHHHHHhcCCCCceeeCCcH--HHHHHcCCCCCCCCCCCCCCccceeEE
Q 044272 53 MAAYVPEFDKREVKLLGLSCD------DVKSHNEWIKDIEAYTPIIADPNR--EIIKQLNMVDPDEKDSSGKQLPSRALH 124 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d------~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~ 124 (133)
|.+..+.+++.|- .+.|..| +.+..-+|..+.-.+.-+++-... ..+++.|+ ..++..|
T Consensus 43 l~~~v~~lk~~~K-~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~gL------------~tIqR~F 109 (192)
T 3kts_A 43 LKALVKYAQAGGK-KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKM------------LAIQRLF 109 (192)
T ss_dssp HHHHHHHHHHTTC-EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTC------------EEEEEEE
T ss_pred HHHHHHHHHHcCC-eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHCCC------------eEEEEEE
Confidence 4444455665553 3344432 345667788864333344443222 45677888 5799999
Q ss_pred EECC
Q 044272 125 IVGP 128 (133)
Q Consensus 125 lid~ 128 (133)
|+|.
T Consensus 110 liDS 113 (192)
T 3kts_A 110 MIDS 113 (192)
T ss_dssp CCSH
T ss_pred EEEc
Confidence 9985
No 437
>2kpt_A Putative secreted protein; methods development, alpha/beta, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum}
Probab=24.31 E-value=97 Score=19.04 Aligned_cols=28 Identities=4% Similarity=0.178 Sum_probs=17.7
Q ss_pred hHHHHHHHHhhhhHHH-HcCceEEEEeCC
Q 044272 46 CTTELGKMAAYVPEFD-KREVKLLGLSCD 73 (133)
Q Consensus 46 C~~~~~~l~~~~~~~~-~~~v~vv~is~d 73 (133)
...+..+|.+..++++ +.+.+|+.|..+
T Consensus 25 s~~~~~~L~~~l~~l~~~tg~qi~VvtV~ 53 (148)
T 2kpt_A 25 SSSDITNIQAAIDDVKASEQKVIFVVFLS 53 (148)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCEEEEEECS
T ss_pred CHHHHHHHHHHHHHHHHhhCCEEEEEEEC
Confidence 3455666666666665 447787777654
No 438
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=24.19 E-value=1.3e+02 Score=18.59 Aligned_cols=16 Identities=13% Similarity=-0.070 Sum_probs=7.0
Q ss_pred HHHHcCceEEEEeCCC
Q 044272 59 EFDKREVKLLGLSCDD 74 (133)
Q Consensus 59 ~~~~~~v~vv~is~d~ 74 (133)
.+++.|+.+..+|..+
T Consensus 110 ~l~~~g~~~~i~t~~~ 125 (235)
T 2om6_A 110 FVKERGLKTAVIGNVM 125 (235)
T ss_dssp HHHHTTCEEEEEECCC
T ss_pred HHHHCCCEEEEEcCCc
Confidence 3334444444444444
No 439
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=24.11 E-value=1.3e+02 Score=23.68 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=27.1
Q ss_pred hhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 55 AYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 55 ~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
+..+.+++.|++++.+|-|+.......+++.+.+.
T Consensus 542 ~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~ 576 (723)
T 3j09_A 542 PAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL 576 (723)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE
Confidence 33445566799999999999988888888888753
No 440
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=23.98 E-value=1e+02 Score=19.20 Aligned_cols=35 Identities=17% Similarity=-0.008 Sum_probs=20.5
Q ss_pred HhhhhHHHHc-CceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 54 AAYVPEFDKR-EVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 54 ~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.++.+.++++ |+.+..+|..+........+..+..
T Consensus 99 ~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 99 RELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp HHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred HHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 3344455555 6776666666666666666666543
No 441
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=23.96 E-value=98 Score=19.37 Aligned_cols=25 Identities=8% Similarity=0.292 Sum_probs=19.8
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~ 72 (133)
.....+.+..+++.++|.++++++.
T Consensus 112 ~~~~~i~~~~~~la~~GlRvLavA~ 136 (170)
T 3gwi_A 112 IMLRKIKRVTDTLNRQGLRVVAVAT 136 (170)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEE
Confidence 3455677778888899999999984
No 442
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=23.95 E-value=1.3e+02 Score=24.53 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=25.3
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.+++++.|++++.||-|.+....+.+++.|..
T Consensus 544 I~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~ 575 (920)
T 1mhs_A 544 VCEAKTLGLSIKMLTGDAVGIARETSRQLGLG 575 (920)
T ss_dssp HHHHHHHTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred HHHHhhcCceEEEEcCCCHHHHHHHHHHcCCC
Confidence 34456678999999999888888888888874
No 443
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=23.77 E-value=1.2e+02 Score=18.06 Aligned_cols=50 Identities=8% Similarity=0.013 Sum_probs=32.6
Q ss_pred hhHHHHcCceEEEEeCCC-H----HHHHHHHHhcCCCCceeeCCcHHHHHHcCCCC
Q 044272 57 VPEFDKREVKLLGLSCDD-V----KSHNEWIKDIEAYTPIIADPNREIIKQLNMVD 107 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~-~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 107 (133)
...+++...+++.|+.|. + ..+..++..++.+.-.+ +...++.+.-|...
T Consensus 33 ~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v-~sk~~LG~a~G~~k 87 (126)
T 2xzm_U 33 LRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSV-PKRASLGEYLGHFT 87 (126)
T ss_dssp HHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEE-SCSHHHHHHHTCCC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEE-CCHHHHHHHHCCCc
Confidence 344455567788888764 2 34566777777665443 46778999888743
No 444
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=23.77 E-value=48 Score=19.65 Aligned_cols=37 Identities=22% Similarity=0.280 Sum_probs=20.5
Q ss_pred CCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeCC
Q 044272 30 DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCD 73 (133)
Q Consensus 30 ~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d 73 (133)
...+||-|| ..||..|... +.+..+.+ ..+.+ +++.+
T Consensus 39 ~~v~VVGfF-~~~~~~~~~~---F~~~A~~~--~d~~F-~~t~~ 75 (124)
T 2l4c_A 39 TEVAVIGFF-QDLEIPAVPI---LHSMVQKF--PGVSF-GISTD 75 (124)
T ss_dssp SSEEEEEEC-SCTTSTHHHH---HHHHHHHC--TTSEE-EEECC
T ss_pred CCCEEEEEE-CCCCChhHHH---HHHHHHhC--CCceE-EEECh
Confidence 345666666 7788888544 44444444 23554 44444
No 445
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=23.69 E-value=96 Score=20.02 Aligned_cols=33 Identities=3% Similarity=-0.017 Sum_probs=25.2
Q ss_pred hhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 56 YVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 56 ~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
..+.++++|+.+..+|.++.....+.+++.+..
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~ 116 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT 116 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 455667789998888888777777778777764
No 446
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=23.57 E-value=1.1e+02 Score=17.45 Aligned_cols=49 Identities=10% Similarity=0.089 Sum_probs=30.1
Q ss_pred hhhHHHHcCceEEEEeCCCHHH----HHHHHHhcCCCCcee--eCCcHHHHHHcCCC
Q 044272 56 YVPEFDKREVKLLGLSCDDVKS----HNEWIKDIEAYTPII--ADPNREIIKQLNMV 106 (133)
Q Consensus 56 ~~~~~~~~~v~vv~is~d~~~~----~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~ 106 (133)
..+.++.....+|.++.|.++. +..+++.++. |++ .+...++.+..|..
T Consensus 30 v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~i--p~~~~~~s~~eLG~A~Gk~ 84 (105)
T 3u5e_c 30 TVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKT--KVYYFQGGNNELGTAVGKL 84 (105)
T ss_dssp HHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTC--EEEECSSCHHHHHHHTTCS
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCC--CEEEeCCCHHHHHHHhCCc
Confidence 3444554557788888885332 3334455443 454 46678899998884
No 447
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=23.29 E-value=67 Score=20.05 Aligned_cols=35 Identities=6% Similarity=0.077 Sum_probs=22.5
Q ss_pred HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 54 AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 54 ~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.++.+.++++|+.+..+|..+........++.+..
T Consensus 92 ~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 126 (226)
T 3mc1_A 92 EALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLA 126 (226)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCH
Confidence 34445556667777777776666666667666654
No 448
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=23.10 E-value=96 Score=18.76 Aligned_cols=39 Identities=0% Similarity=-0.026 Sum_probs=24.9
Q ss_pred HHHHhhhhHHHHcCceEEEEeCCCH---------------HHHHHHHHhcCCCC
Q 044272 51 GKMAAYVPEFDKREVKLLGLSCDDV---------------KSHNEWIKDIEAYT 89 (133)
Q Consensus 51 ~~l~~~~~~~~~~~v~vv~is~d~~---------------~~~~~~~~~~~~~~ 89 (133)
+...+..+.++++|+.+..+|..+. +.+....++.+..+
T Consensus 30 ~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 83 (179)
T 3l8h_A 30 PGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVV 83 (179)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCce
Confidence 4455556666777899888886653 44556666777333
No 449
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=23.10 E-value=67 Score=23.85 Aligned_cols=42 Identities=7% Similarity=-0.002 Sum_probs=32.7
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeC----CCHHHHHHHHHhcCCCC
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSC----DDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~----d~~~~~~~~~~~~~~~~ 89 (133)
-....|.++.+++++.|..++.+.. ++.+.+.+++++++...
T Consensus 53 fl~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~l~~l~~~~~~~~ 98 (471)
T 1dnp_A 53 LINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTH 98 (471)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHHHHHHHHcCCCE
Confidence 4578888999999999999888843 45677788888887654
No 450
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=23.00 E-value=97 Score=21.28 Aligned_cols=40 Identities=13% Similarity=0.117 Sum_probs=30.0
Q ss_pred HHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 49 ELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 49 ~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
....|....+.+++.|++| ++-.|+....-+.+.+.|.+.
T Consensus 109 ~~~~L~~~i~~L~~~GIrV-SLFIDpd~~qi~aA~~~GAd~ 148 (260)
T 3o6c_A 109 NHAKLKQSIEKLQNANIEV-SLFINPSLEDIEKSKILKAQF 148 (260)
T ss_dssp TCTTHHHHHHHHHHTTCEE-EEEECSCHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHhCCCE
Confidence 4456667777888889874 666677777788888888876
No 451
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=22.95 E-value=29 Score=21.32 Aligned_cols=12 Identities=42% Similarity=0.368 Sum_probs=10.0
Q ss_pred eEEEECCCCccC
Q 044272 122 ALHIVGPDHQVQ 133 (133)
Q Consensus 122 ~~~lid~~G~i~ 133 (133)
+++++|++|+|+
T Consensus 34 gi~v~D~~g~I~ 45 (152)
T 3mxq_A 34 ALCIVRNDYVIV 45 (152)
T ss_dssp EEEEEETTSBEE
T ss_pred CEEEEcCCCEEE
Confidence 788899999874
No 452
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=22.94 E-value=59 Score=18.65 Aligned_cols=12 Identities=33% Similarity=0.659 Sum_probs=9.7
Q ss_pred eeEEEECCCCcc
Q 044272 121 RALHIVGPDHQV 132 (133)
Q Consensus 121 p~~~lid~~G~i 132 (133)
...++.||+|..
T Consensus 114 ~~~~~~DPdGn~ 125 (132)
T 3sk2_A 114 RTFLISDPDGHI 125 (132)
T ss_dssp EEEEEECTTCCE
T ss_pred EEEEEECCCCCE
Confidence 467889999975
No 453
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=22.86 E-value=24 Score=22.31 Aligned_cols=13 Identities=23% Similarity=0.273 Sum_probs=9.6
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 63 IGYhflI~~dG~I 75 (167)
T 2f2l_A 63 IAYNFLIGGDGNV 75 (167)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCCcEEEcCCCEE
Confidence 5567888888876
No 454
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=22.67 E-value=63 Score=21.05 Aligned_cols=31 Identities=3% Similarity=-0.012 Sum_probs=19.5
Q ss_pred HHHHhhhhHHHH--cCceEEEEeCCCHHHHHHH
Q 044272 51 GKMAAYVPEFDK--REVKLLGLSCDDVKSHNEW 81 (133)
Q Consensus 51 ~~l~~~~~~~~~--~~v~vv~is~d~~~~~~~~ 81 (133)
+++.+..+..++ +|+.+|+|+......+.++
T Consensus 120 ~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~ 152 (220)
T 3etn_A 120 REIVELTQLAHNLNPGLKFIVITGNPDSPLASE 152 (220)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeEEEEECCCCChhHHh
Confidence 344444555666 7899999997654444444
No 455
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=22.66 E-value=1.6e+02 Score=18.81 Aligned_cols=50 Identities=8% Similarity=0.088 Sum_probs=26.0
Q ss_pred EecCCC-eeecccccCCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEe
Q 044272 15 VQTNQG-NFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLS 71 (133)
Q Consensus 15 l~~~~G-~~~l~d~~~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is 71 (133)
+++.+| ++...+...|.++|+ ..+..+... .. ....+.+.++|.+++++.
T Consensus 3 ~~~~~g~~l~y~~~G~g~~vvl--lHG~~~~~~-~w----~~~~~~l~~~g~~vi~~D 53 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWGSGKPVLF--SHGWLLDAD-MW----EYQMEYLSSRGYRTIAFD 53 (271)
T ss_dssp EECTTSCEEEEEEESSSSEEEE--ECCTTCCGG-GG----HHHHHHHHTTTCEEEEEC
T ss_pred EEcCCCCEEEEEccCCCCeEEE--ECCCCCcHH-HH----HHHHHHHHhCCceEEEec
Confidence 456678 776666634444433 345433321 11 122233445578888886
No 456
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=22.65 E-value=1.2e+02 Score=18.55 Aligned_cols=31 Identities=6% Similarity=0.083 Sum_probs=17.5
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
.+.+++.|+.+..+|..+........+..+.
T Consensus 98 l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~ 128 (225)
T 3d6j_A 98 LTHLKKQGIRIGIISTKYRFRILSFLRNHMP 128 (225)
T ss_dssp HHHHHHHTCEEEEECSSCHHHHHHHHHTSSC
T ss_pred HHHHHHCCCeEEEEECCCHHHHHHHHHHcCc
Confidence 3344445666666666665555555555554
No 457
>1yck_A Peptidoglycan recognition protein; PGRP-S, innate immunity, pattern recognition proteins, immune syste; 1.70A {Homo sapiens} SCOP: d.118.1.1 PDB: 3mu9_A* 2r2k_A 2z9n_A* 2r90_A* 3c93_A* 3cg9_A* 3cor_A* 3cxa_A* 3c2x_A* 3ng4_A* 3nkw_A* 3nno_A* 3nw3_A* 3o4k_A* 3ogx_A* 3olk_A* 3qj1_A* 3qs0_A* 3qv4_A* 3rt4_A* ...
Probab=22.55 E-value=25 Score=22.41 Aligned_cols=13 Identities=23% Similarity=0.253 Sum_probs=10.2
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 72 igyhflI~~dG~I 84 (175)
T 1yck_A 72 VGYNFLIGEDGLV 84 (175)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCceEEECCCCEE
Confidence 4567889999987
No 458
>2cb3_A Peptidoglycan-recognition protein-LE; PGRP, tracheal cytotoxin, innate immunity, immune system; HET: MLD; 2.40A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=22.38 E-value=25 Score=22.37 Aligned_cols=13 Identities=23% Similarity=0.235 Sum_probs=9.6
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 68 igyhflI~~dG~I 80 (175)
T 2cb3_A 68 IAYNFLVGCDGNI 80 (175)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCceEEECCCCEE
Confidence 4467888888876
No 459
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=22.34 E-value=41 Score=21.15 Aligned_cols=16 Identities=13% Similarity=0.308 Sum_probs=9.1
Q ss_pred hHHHHcCceEEEEeCC
Q 044272 58 PEFDKREVKLLGLSCD 73 (133)
Q Consensus 58 ~~~~~~~v~vv~is~d 73 (133)
+..+++|+.+|+|+..
T Consensus 137 ~~ak~~g~~vI~IT~~ 152 (198)
T 2xbl_A 137 REAKAKGMTCVGFTGN 152 (198)
T ss_dssp HHHHHTTCEEEEEECS
T ss_pred HHHHHCCCeEEEEECC
Confidence 3344556666666653
No 460
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=22.33 E-value=1.4e+02 Score=18.24 Aligned_cols=20 Identities=0% Similarity=0.107 Sum_probs=13.3
Q ss_pred HHhhhhHHHHcCceEEEEeC
Q 044272 53 MAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~ 72 (133)
+..+.+.+.++|..++.+..
T Consensus 58 ~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 58 VTMAARALRELGITVVRFNF 77 (220)
T ss_dssp HHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHCCCeEEEEec
Confidence 34445556667899988864
No 461
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=22.18 E-value=1.1e+02 Score=16.93 Aligned_cols=26 Identities=12% Similarity=0.217 Sum_probs=20.5
Q ss_pred CceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 64 EVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 64 ~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
++.-+++.+++.+...+.+++.|...
T Consensus 81 g~~~~~~~v~d~~~~~~~l~~~G~~~ 106 (134)
T 3l7t_A 81 GLRHLAFYVEDVEASRQELIALGIRV 106 (134)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHTCCC
T ss_pred CeEEEEEEECCHHHHHHHHHhCCCcc
Confidence 56678888898888888888877653
No 462
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=22.11 E-value=97 Score=20.40 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=28.0
Q ss_pred cCceEEEEeC-------CC---HHHHHHHHHhcCCCC----ceeeCCcHHHHHHcCC
Q 044272 63 REVKLLGLSC-------DD---VKSHNEWIKDIEAYT----PIIADPNREIIKQLNM 105 (133)
Q Consensus 63 ~~v~vv~is~-------d~---~~~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~ 105 (133)
.|+++|.|+. +. +++.++.+++.|... -.+++..+.+++.||-
T Consensus 65 ~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~lsgveR~is~kfGG 121 (201)
T 1vp8_A 65 EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHILSGLERSISRKLGG 121 (201)
T ss_dssp TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCTTTTTHHHHHHHTCC
T ss_pred cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEeccccchhHHHHHhcCC
Confidence 4688888884 11 455666777777654 4555666778888864
No 463
>2xz8_A Peptidoglycan-recognition protein LF; immune system, innate immunity, PGRP-LF; HET: PG4; 1.94A {Drosophila melanogaster}
Probab=22.09 E-value=26 Score=21.90 Aligned_cols=13 Identities=8% Similarity=0.110 Sum_probs=9.0
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|+.||+|
T Consensus 70 IGYnFlI~~dG~V 82 (150)
T 2xz8_A 70 INYNFVAAGDENI 82 (150)
T ss_dssp CSCSEEECTTSCE
T ss_pred CCCcEEEcCCCeE
Confidence 4466777777776
No 464
>2e0i_A 432AA long hypothetical deoxyribodipyrimidine PHO; photolyase, FAD, DNA repair, lyase; HET: FAD; 2.80A {Sulfolobus tokodaii}
Probab=22.05 E-value=1.4e+02 Score=22.02 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=28.6
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHH
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIK 83 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~ 83 (133)
-....|.++.+++++.|..++.+..++.+.+.+.++
T Consensus 53 Fl~~sL~~L~~~L~~~G~~L~v~~g~~~~~l~~l~~ 88 (440)
T 2e0i_A 53 FMINSLLELDDELRKKGSRLNVFFGEAEKVVSRFFN 88 (440)
T ss_dssp HHHHHHHHHHHHHHTTTCCCEEEESCHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHc
Confidence 457888889999999999887777777777777766
No 465
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=21.86 E-value=2e+02 Score=19.75 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=22.7
Q ss_pred hhHHHHcC-ceEEEEeCCCHHHHHHHHHhcCC
Q 044272 57 VPEFDKRE-VKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 57 ~~~~~~~~-v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
.+++.+.| ++-++||.-+.+.+.+..+..+.
T Consensus 143 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~ 174 (298)
T 3up8_A 143 LNEVRNAGKVRHIGISNFNTTQMEEAARLSDA 174 (298)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHCSS
T ss_pred HHHHHHcCCccEEEEcCCCHHHHHHHHHhCCC
Confidence 34445555 77999999888888888777654
No 466
>3zxs_A Cryptochrome B, rscryb; lyase, cryPro, lumazine, iron-sulfur-cluster; HET: FAD DLZ; 2.70A {Rhodobacter sphaeroides}
Probab=21.77 E-value=2.1e+02 Score=21.80 Aligned_cols=50 Identities=12% Similarity=0.103 Sum_probs=37.7
Q ss_pred HHHHHHHHhhhhHHHHcCceEEEEeCC-------CHHHHHHHHHhcCCCCceeeCCc
Q 044272 47 TTELGKMAAYVPEFDKREVKLLGLSCD-------DVKSHNEWIKDIEAYTPIIADPN 96 (133)
Q Consensus 47 ~~~~~~l~~~~~~~~~~~v~vv~is~d-------~~~~~~~~~~~~~~~~~~~~d~~ 96 (133)
......|..+.++++++|.+|+-+..| ..+.+.+.+++.+.....+.++.
T Consensus 63 ~~l~saMr~fa~~L~~~G~~v~y~~~~~~~~~g~~~~~L~~l~~~~~~~~v~~~~P~ 119 (522)
T 3zxs_A 63 ALILAAMRKFARRLQERGFRVAYSRLDDPDTGPSIGAELLRRAAETGAREAVATRPG 119 (522)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTCTTCCSSHHHHHHHHHHHHTCCCEEEECCS
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccCccccCCHHHHHHHHHHHcCCCEEEEeCcc
Confidence 445778888889999999999988843 36777888888887765555544
No 467
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=21.52 E-value=37 Score=21.18 Aligned_cols=15 Identities=27% Similarity=0.282 Sum_probs=8.5
Q ss_pred HHHHcCceEEEEeCC
Q 044272 59 EFDKREVKLLGLSCD 73 (133)
Q Consensus 59 ~~~~~~v~vv~is~d 73 (133)
..+++|+.+|+|+..
T Consensus 132 ~ak~~g~~vi~iT~~ 146 (188)
T 1tk9_A 132 KAKELNMLCLGLSGK 146 (188)
T ss_dssp HHHHTTCEEEEEEEG
T ss_pred HHHHCCCEEEEEeCC
Confidence 344556666666653
No 468
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=21.47 E-value=1.5e+02 Score=18.82 Aligned_cols=60 Identities=13% Similarity=0.012 Sum_probs=28.2
Q ss_pred ceEEecCCCeee--ccccc-CCCeEEEEEeeCCCCchhHHHHHHHHhhhhHHHHcCceEEEEeC
Q 044272 12 NLQVQTNQGNFK--LHDFI-GDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSC 72 (133)
Q Consensus 12 ~f~l~~~~G~~~--l~d~~-~~~~~vl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~ 72 (133)
++.+...+|++. +.... ++++++|++. +............+..+.+.+.++|..++++..
T Consensus 25 ~~~~~~~~g~l~~~~~~p~~~~~p~vv~~H-G~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 87 (249)
T 2i3d_A 25 EVIFNGPAGRLEGRYQPSKEKSAPIAIILH-PHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNF 87 (249)
T ss_dssp EEEEEETTEEEEEEEECCSSTTCCEEEEEC-CCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEECCCceEEEEEEcCCCCCCCEEEEEC-CCcccCCCccchHHHHHHHHHHHCCCEEEEECC
Confidence 777777777432 22111 3345555543 321101111111223344556667899988863
No 469
>1lba_A T7 lysozyme; hydrolase(acting on linear amides); 2.20A {Enterobacteria phage T7} SCOP: d.118.1.1 PDB: 1aro_L
Probab=21.28 E-value=37 Score=20.79 Aligned_cols=14 Identities=21% Similarity=0.119 Sum_probs=11.1
Q ss_pred cceeEEEECCCCcc
Q 044272 119 PSRALHIVGPDHQV 132 (133)
Q Consensus 119 ~~p~~~lid~~G~i 132 (133)
.+...|+|++||+|
T Consensus 39 ~isyHflI~~dG~I 52 (146)
T 1lba_A 39 DVGYHFIIKRDGTV 52 (146)
T ss_dssp SCSCSEEECTTSCE
T ss_pred CcCceEEECCCCEE
Confidence 35578899999987
No 470
>3jqo_B TRAO protein; helical outer membrane TM, outer membrane protein complex, plasmid, transport protein; HET: LDA; 2.60A {Escherichia coli} PDB: 2ofq_A
Probab=21.28 E-value=49 Score=20.25 Aligned_cols=14 Identities=0% Similarity=0.040 Sum_probs=12.2
Q ss_pred ccceeEEEECCCCc
Q 044272 118 LPSRALHIVGPDHQ 131 (133)
Q Consensus 118 ~~~p~~~lid~~G~ 131 (133)
...|++|+++++|+
T Consensus 56 ~~~Paif~v~~dG~ 69 (135)
T 3jqo_B 56 AELPQVYMISASGK 69 (135)
T ss_dssp SCCCEEEEECTTSS
T ss_pred CCCCeEEEECCCCC
Confidence 37999999999985
No 471
>2f2l_X Peptidoglycan recognition protein-LC isoform LCX; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=21.28 E-value=27 Score=22.02 Aligned_cols=13 Identities=31% Similarity=0.291 Sum_probs=9.6
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 64 igyhflI~~dG~I 76 (167)
T 2f2l_X 64 IGYNFLVGGDGRV 76 (167)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCceEEECCCCEE
Confidence 4567888888876
No 472
>2rkq_A Peptidoglycan-recognition protein-SD; innate immunity, TOLL, pattern recognition, PGRP, glycoprotein, immune response, secreted,; 1.50A {Drosophila melanogaster}
Probab=21.16 E-value=28 Score=22.01 Aligned_cols=13 Identities=15% Similarity=0.194 Sum_probs=9.8
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 65 igyhflI~~dG~I 77 (169)
T 2rkq_A 65 IGYHYLIGGNGKV 77 (169)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCCcEEECCCCEE
Confidence 4467888888876
No 473
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=21.13 E-value=1.6e+02 Score=18.48 Aligned_cols=60 Identities=10% Similarity=-0.005 Sum_probs=40.0
Q ss_pred CCchhHHHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCceeeCCcHHHHH
Q 044272 42 FTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPIIADPNREIIK 101 (133)
Q Consensus 42 ~c~~C~~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 101 (133)
.||--+.+.|...-+...++++|.+++.-+....-.+.+.+..-+....-+.|-+.-+..
T Consensus 14 GCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlevaDPe~~Y~~~~~diD~~l~~ 73 (157)
T 1kjn_A 14 GCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVADPEGIYTDEMVDLESCINE 73 (157)
T ss_dssp CCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHSTTCCSCSEEEEHHHHHHH
T ss_pred cCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheeccCCCcchhcceeeHHHHHhh
Confidence 599999999999999999999999986555444445555555544443333444444433
No 474
>2xz4_A Peptidoglycan-recognition protein LF; immune system, innate immunity; HET: 1PG; 1.72A {Drosophila melanogaster}
Probab=21.12 E-value=28 Score=22.27 Aligned_cols=13 Identities=31% Similarity=0.314 Sum_probs=10.0
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 71 igyhflI~~dG~I 83 (180)
T 2xz4_A 71 IGYNFLVGGDGQI 83 (180)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCceEEECCCCEE
Confidence 4467888888887
No 475
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=20.96 E-value=1.9e+02 Score=19.18 Aligned_cols=34 Identities=3% Similarity=-0.078 Sum_probs=21.5
Q ss_pred hhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCCc
Q 044272 57 VPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP 90 (133)
Q Consensus 57 ~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~ 90 (133)
.++++++|+.++..|--+...+..+.+..+...+
T Consensus 30 l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 63 (288)
T 1nrw_A 30 LRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTW 63 (288)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCE
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 3445556888776665566777777776665443
No 476
>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}
Probab=20.92 E-value=1.4e+02 Score=17.51 Aligned_cols=13 Identities=15% Similarity=0.156 Sum_probs=10.2
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
....++.||+|.+
T Consensus 128 ~~~~~~~DPdG~~ 140 (146)
T 3ct8_A 128 HYAVFCEDPNRIK 140 (146)
T ss_dssp CCEEEEECTTCCE
T ss_pred eEEEEEECCCCCE
Confidence 4577889999975
No 477
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=20.79 E-value=15 Score=25.64 Aligned_cols=7 Identities=14% Similarity=0.520 Sum_probs=5.6
Q ss_pred CCchhHH
Q 044272 42 FTPVCTT 48 (133)
Q Consensus 42 ~c~~C~~ 48 (133)
|||.|+.
T Consensus 281 ~CP~CQ~ 287 (295)
T 3vk8_A 281 WAPAIQK 287 (295)
T ss_dssp ECTTTCB
T ss_pred ECCCCCC
Confidence 5999975
No 478
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=20.70 E-value=87 Score=21.55 Aligned_cols=37 Identities=8% Similarity=-0.116 Sum_probs=27.8
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCCC
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYT 89 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~ 89 (133)
..++.+.+++.|+.+..+|.+.........++.+...
T Consensus 183 ~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~ 219 (335)
T 3n28_A 183 LPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY 219 (335)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe
Confidence 3445566677899998898887777788888888753
No 479
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=20.67 E-value=77 Score=21.40 Aligned_cols=35 Identities=11% Similarity=0.208 Sum_probs=21.2
Q ss_pred HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCCC
Q 044272 54 AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY 88 (133)
Q Consensus 54 ~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~ 88 (133)
.+..+.+++.|+.++.+|-+-....++.+++.+..
T Consensus 147 ~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~ 181 (297)
T 4fe3_A 147 ENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVY 181 (297)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 34444555566777777766666666666666654
No 480
>1sxr_A Peptidoglycan recognition protein SA CG11709-PA; pattern recognition receptor, innate immunity pathway, immune system; 1.56A {Drosophila melanogaster} SCOP: d.118.1.1
Probab=20.64 E-value=29 Score=22.37 Aligned_cols=13 Identities=23% Similarity=0.235 Sum_probs=10.0
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|||++||+|
T Consensus 74 IgyhflI~~dG~I 86 (183)
T 1sxr_A 74 ISYNFLIGNDGIV 86 (183)
T ss_dssp CSSSEEECTTCCE
T ss_pred CCceEEECCCCEE
Confidence 4467888888886
No 481
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=20.45 E-value=94 Score=19.86 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=20.8
Q ss_pred HhhhhHHHHcCceEEEEeCCCHHHHHHHHHhcCC
Q 044272 54 AAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEA 87 (133)
Q Consensus 54 ~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 87 (133)
.++.+.++++|+.+..+|..+.+......++.+.
T Consensus 116 ~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 116 LDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 3444455666777776776655656666666554
No 482
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=20.43 E-value=2e+02 Score=20.84 Aligned_cols=28 Identities=14% Similarity=0.269 Sum_probs=17.8
Q ss_pred CCCceEEecCCC---eeecccccCCCeEEEEE
Q 044272 9 SVPNLQVQTNQG---NFKLHDFIGDNWTIIFS 37 (133)
Q Consensus 9 ~~p~f~l~~~~G---~~~l~d~~~~~~~vl~f 37 (133)
.+|.|...+..| ++....+ +|+.+++.-
T Consensus 137 ~ipgfp~sTv~Gh~g~l~~G~l-~G~~Vvvm~ 167 (373)
T 2p4s_A 137 TIPHFPVSTVAGHVGRLVFGYL-AGVPVMCMQ 167 (373)
T ss_dssp GSTTCCCCCSTTCCCEEEEEEE-TTEEEEEEE
T ss_pred cCCCCCCCCCCCCCceeEEEEE-CCEEEEEEe
Confidence 456666655555 4666777 777776655
No 483
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=20.42 E-value=34 Score=21.65 Aligned_cols=24 Identities=21% Similarity=0.170 Sum_probs=17.5
Q ss_pred HHhhhhHHHHcCceEEEEeCCCHH
Q 044272 53 MAAYVPEFDKREVKLLGLSCDDVK 76 (133)
Q Consensus 53 l~~~~~~~~~~~v~vv~is~d~~~ 76 (133)
+.++.+.+++.|..+..||.++++
T Consensus 122 ve~L~e~~~~~G~~v~ivs~~~ee 145 (166)
T 3ir9_A 122 VDEFSELADKSNAKVVFVSTDFDE 145 (166)
T ss_dssp HHHHHHHHHHTTCEEEEECSCSHH
T ss_pred HHHHHHHHHhcCCEEEEECCCChh
Confidence 345566667778999999988765
No 484
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=20.41 E-value=36 Score=20.65 Aligned_cols=12 Identities=8% Similarity=-0.025 Sum_probs=10.4
Q ss_pred eEEEECCCCccC
Q 044272 122 ALHIVGPDHQVQ 133 (133)
Q Consensus 122 ~~~lid~~G~i~ 133 (133)
+.+++|++|+|.
T Consensus 34 GiivlD~dg~I~ 45 (129)
T 1mzu_A 34 GAIQVDGSGVIH 45 (129)
T ss_dssp EEEEEETTCBEE
T ss_pred eEEEECCCCeEE
Confidence 788899999984
No 485
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=20.35 E-value=43 Score=21.87 Aligned_cols=23 Identities=13% Similarity=0.346 Sum_probs=11.6
Q ss_pred eEEEEEeeCCCCchhHHHHHHHH
Q 044272 32 WTIIFSHPGDFTPVCTTELGKMA 54 (133)
Q Consensus 32 ~~vl~f~~~~~c~~C~~~~~~l~ 54 (133)
+.|..|.+-+-|+-|...+.++.
T Consensus 86 y~VTwy~SwSPC~~CA~~va~FL 108 (190)
T 3vow_A 86 YQVTWYTSWSPCPDCAGEVAEFL 108 (190)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHH
T ss_pred EEEEEEEeCCchHHHHHHHHHHH
Confidence 33334333333666766665554
No 486
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=20.19 E-value=1.8e+02 Score=21.17 Aligned_cols=37 Identities=11% Similarity=0.165 Sum_probs=30.9
Q ss_pred HHHHHHHhhhhHHHHcCceEEEEeCCCHHHHHHHHHh
Q 044272 48 TELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKD 84 (133)
Q Consensus 48 ~~~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~ 84 (133)
...+.+.++.+.++++|+.+..+|..+.+.+.+.+++
T Consensus 256 ~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 256 KAFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 4467788888889999999998998888888888876
No 487
>3ep1_A PGRP-HD - peptidoglycan recognition protein homologue; immune system, thermophIle, model system; 2.10A {Alvinella pompejana}
Probab=20.12 E-value=30 Score=22.26 Aligned_cols=13 Identities=8% Similarity=0.164 Sum_probs=9.2
Q ss_pred ceeEEEECCCCcc
Q 044272 120 SRALHIVGPDHQV 132 (133)
Q Consensus 120 ~p~~~lid~~G~i 132 (133)
+...|+|++||+|
T Consensus 78 IGYhflI~~dG~I 90 (176)
T 3ep1_A 78 IKYNFLIDQDGVI 90 (176)
T ss_dssp CSCSEEECTTSCE
T ss_pred cCccEEEcCCCEE
Confidence 5566777777776
Done!