BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044275
(168 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255566393|ref|XP_002524182.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223536551|gb|EEF38197.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 155
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/119 (63%), Positives = 98/119 (82%), Gaps = 6/119 (5%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKKEKAGKKK------DSNAPKRPLSAYFIFME 54
MKGPR +AQKKP + +LKARKAE+KP KE+A +K D++APKRP SA+FIFM+
Sbjct: 1 MKGPRNAVIAQKKPSSKVLKARKAESKPGKEEASSRKKKNVSKDTDAPKRPASAFFIFMD 60
Query: 55 DFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
+FRK FKE +PDNK+V+A+GKAGG+KWKS+SE +KAPY++KAL +KAEYE LEAYK+Q
Sbjct: 61 EFRKYFKEKYPDNKAVSAVGKAGGEKWKSLSETDKAPYLEKALKRKAEYEKVLEAYKQQ 119
>gi|449468356|ref|XP_004151887.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449517965|ref|XP_004166014.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
Length = 142
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 101/153 (66%), Gaps = 14/153 (9%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSF 60
M+ R V KKP+ LK RKAE K K KKKD NAPKRP + +F+FME+FRK++
Sbjct: 1 MRALRNAVVTHKKPNPQKLKQRKAEMKSTK---SKKKDQNAPKRPATTFFVFMEEFRKTY 57
Query: 61 KESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLN-DNGA 119
KE FPD K+ +GK GG+KWKSMS+AEKAPY +KAL +KAEYE+ALEAYK LN
Sbjct: 58 KEQFPDAKAGPVVGKVGGEKWKSMSDAEKAPYAEKALKRKAEYEIALEAYKNNLNCPQNH 117
Query: 120 GVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSS 152
+ +S KSTSEV ND+ EQE SS
Sbjct: 118 RMPTESQKSTSEV----------NDDTEQEASS 140
>gi|145323962|ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191890|gb|AEE30011.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 140
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 11/127 (8%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP K G KD N PKRP SA+F+FMEDFR ++KE P NKSVAA+GKAGG+KWKS+S+
Sbjct: 20 KPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSD 79
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEA 146
+EKAPYV KA +K EYE ++AY K+L + G E+S KS SEV NDE
Sbjct: 80 SEKAPYVAKADKRKVEYEKNMKAYNKKL-EEGPKEDEESDKSVSEV----------NDED 128
Query: 147 EQEFSSQ 153
+ E S+
Sbjct: 129 DAEDGSE 135
>gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|75220405|sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High
mobility group protein B 2; Short=AtHMGbeta2; Short=HMG
beta 2; AltName: Full=Nucleosome/chromatin assembly
factor group D 03; Short=Nucleosome/chromatin assembly
factor group D 3
gi|15724174|gb|AAL06479.1|AF411789_1 At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|1694976|emb|CAA70691.1| HMG1 [Arabidopsis thaliana]
gi|2832361|emb|CAA74402.1| HMG protein [Arabidopsis thaliana]
gi|20453325|gb|AAM19901.1| At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|21537072|gb|AAM61413.1| unknown [Arabidopsis thaliana]
gi|22530942|gb|AAM96975.1| expressed protein [Arabidopsis thaliana]
gi|23198424|gb|AAN15739.1| expressed protein [Arabidopsis thaliana]
gi|332191888|gb|AEE30009.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 141
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP K G KD N PKRP SA+F+FMEDFR ++KE P NKSVAA+GKAGG+KWKS+S+
Sbjct: 20 KPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSD 79
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+EKAPYV KA +K EYE ++AY K+L + G E+S KS SEV
Sbjct: 80 SEKAPYVAKADKRKVEYEKNMKAYNKKL-EEGPKEDEESDKSVSEV 124
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP K G KD N PKRP SA+F+FMEDFR ++KE P NKSVAA+GKAGG+KWKS+S+
Sbjct: 541 KPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSD 600
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+EKAPYV KA +K EYE ++AY K+L + G E+S KS SEV
Sbjct: 601 SEKAPYVAKADKRKVEYEKNMKAYNKKL-EEGPKEDEESDKSVSEV 645
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 81/124 (65%), Gaps = 12/124 (9%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFR++FK+ P NKSVA +GKA G KWKS+S++EKAPYV KA
Sbjct: 410 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 469
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSS-QVS 155
+K EYE ++AY K+L + G ED + S SE+NDE + E S +VS
Sbjct: 470 EKRKVEYEKNIKAYNKKLEE---GPKED--------EESDKSVSEVNDEDDAEDGSEEVS 518
Query: 156 SYFM 159
M
Sbjct: 519 ESIM 522
>gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
gi|297336244|gb|EFH66661.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 85/127 (66%), Gaps = 11/127 (8%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP K G KD N PKRP SA+F+FMEDFR+++K+ P NKSVAA+GKAGG+KWKS+S+
Sbjct: 22 KPAKGGKGAAKDPNKPKRPSSAFFVFMEDFRETYKKEHPKNKSVAAVGKAGGEKWKSLSD 81
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEA 146
+EKAPYV KA +K EYE ++AY K+L + G ED + S SE+NDE
Sbjct: 82 SEKAPYVAKADKRKVEYEKNMKAYNKKLEE---GPKED--------EESDKSVSEVNDED 130
Query: 147 EQEFSSQ 153
+ E S+
Sbjct: 131 DAEDGSE 137
>gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
Length = 139
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK +KE+ PDN+SV+A+GKAGG+KWKSM++AEKAPYVQKA
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAE 93
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K+EY ++AY +L G G ++S KS SEV
Sbjct: 94 KRKSEYNKKMQAYNLKL--AGGGNDDESDKSKSEV 126
>gi|224081483|ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
gi|222855878|gb|EEE93425.1| high mobility group family [Populus trichocarpa]
Length = 144
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK +KES P+NKSVAA+GKAGG KWKS+SEAEKAPY KA
Sbjct: 34 KDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKA 93
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQ 133
+K EY + AY K+L G ++S KS SEV
Sbjct: 94 EKRKFEYNKDMAAYNKRL---AGGNDDESDKSKSEVN 127
>gi|116778852|gb|ABK21026.1| unknown [Picea sitchensis]
gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis]
gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis]
gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis]
gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis]
gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis]
gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis]
gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis]
gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis]
gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis]
Length = 157
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
Query: 29 KKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
++EK G+K KD N PKRP SA+F+FMEDFRK++KE P+ KSV+ +GKAGG KWKSMSE
Sbjct: 37 RQEKKGRKAAKDPNKPKRPASAFFVFMEDFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSE 96
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
A+KAPYV KA +K EYE + AY + +E+S KS SEV
Sbjct: 97 ADKAPYVAKAGKRKTEYEKNMAAYNNKQTSTAGDSAEESDKSKSEV 142
>gi|118484838|gb|ABK94286.1| unknown [Populus trichocarpa]
Length = 144
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK +KES P+NKSVAA+GKAGG KWKS+SEAEKAP+ KA
Sbjct: 34 KDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKA 93
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQ 133
+K EY + AY K+L G ++S KS SEV
Sbjct: 94 EKRKFEYNKDMAAYNKRL---AGGNDDESDKSKSEVN 127
>gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFR++FK+ P NKSVAA+GKA G KWKS+S+AEKAPYV KA
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKAPYVAKA 92
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K +YE ++AY K+L + G E+S KS SEV
Sbjct: 93 EKRKVDYEKNMKAYNKKL-EEGPKEDEESDKSVSEV 127
>gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP K G KD N PKRP SA+F+FME+FR+++K+ P+NKSVAA+GKAGGQKWKS+S+
Sbjct: 20 KPTKGGKGAAKDPNKPKRPASAFFVFMEEFRETYKKEHPNNKSVAAVGKAGGQKWKSLSD 79
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQ 133
+EKAPY KA +K EYE + AY K+ + G E+S KS SEV
Sbjct: 80 SEKAPYQAKADKRKVEYEKNMNAYNKK-QEEGPKEDEESDKSVSEVH 125
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FM DFR+ +K+ P+NKSVAA+GKA G++WKS+SE EKAPYV +A
Sbjct: 40 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 99
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
L KK EYE+ L+AY K+L G E S KS SEV
Sbjct: 100 LKKKEEYEITLQAYNKKL--EGKDDEEGSDKSKSEV 133
>gi|359476973|ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
vinifera]
Length = 156
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKEKA K D N PKRP SA+F+FME+FRK +KE P NKSV+ +GKAGG KWKS+SEAE
Sbjct: 36 KKEKAVK--DPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAE 93
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLNDN-GAGVSEDSWKSTSEV 132
KAPYV KA +K EY +++AY K++ + A E+S KS SEV
Sbjct: 94 KAPYVAKAEKRKTEYNKSMQAYNKRMAEGPTAAEEEESDKSRSEV 138
>gi|296088654|emb|CBI37645.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKEKA K D N PKRP SA+F+FME+FRK +KE P NKSV+ +GKAGG KWKS+SEAE
Sbjct: 34 KKEKAVK--DPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAE 91
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLNDN-GAGVSEDSWKSTSEV 132
KAPYV KA +K EY +++AY K++ + A E+S KS SEV
Sbjct: 92 KAPYVAKAEKRKTEYNKSMQAYNKRMAEGPTAAEEEESDKSRSEV 136
>gi|357640485|gb|AET87126.1| high mobility group B2 protein [Brassica napus]
Length = 145
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 74/95 (77%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FMEDFR+++K+ P+NKSVAA+GKAGG+KWKS+S++EKAP+V KA
Sbjct: 34 DPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKAD 93
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K EYE ++AY K+L + E+S KS SEV
Sbjct: 94 KRKVEYEKTMKAYNKKLEEGPKEDEEESDKSVSEV 128
>gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191889|gb|AEE30010.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 147
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 68/88 (77%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP K G KD N PKRP SA+F+FMEDFR ++KE P NKSVAA+GKAGG+KWKS+S+
Sbjct: 20 KPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSD 79
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
+EKAPYV KA +K EYE ++AY K+L
Sbjct: 80 SEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>gi|42572635|ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis thaliana]
gi|332645335|gb|AEE78856.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 185
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR SA+F+F+EDFR +FK+ P+ K+V+A+GKAGGQKWKSMS+AEKAPY +K
Sbjct: 47 KKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEK 106
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIN 143
A +KAEYE ++AY K L + S++S KS SE+ +S E+
Sbjct: 107 AAKRKAEYEKQMDAYNKNLEEG----SDESEKSRSEINDEDEASGEVT 150
>gi|297819892|ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
gi|297323667|gb|EFH54088.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
Length = 185
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR SA+F+F+EDFR +FK+ P+ K+V+A+GKAGGQKWKSMS+AEKAPY +K
Sbjct: 47 KKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEK 106
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIN 143
A +KAEYE ++AY K + + S++S KS SEV +S E+
Sbjct: 107 AAKRKAEYEKQMDAYNKNMEEG----SDESEKSRSEVNDEDEASGEVT 150
>gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK++KE P+NKSVAA+GKAGG KWK +++AEKAP++ KA
Sbjct: 31 KDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKA 90
Query: 97 LNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
+K EYE +++AY +KQ + A E+S KS SEV
Sbjct: 91 EKRKQEYEKSMQAYNRKQAGE--AADEEESDKSRSEV 125
>gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 142
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFR++FK+ P NKSVA +GKA G KWKS+S++EKAPYV KA
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 92
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K EYE ++AY K+L + G E+S KS SEV
Sbjct: 93 EKRKVEYEKNIKAYNKKL-EEGPKEDEESDKSVSEV 127
>gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High mobility group B protein 2; AltName: Full=High
mobility group protein B 1; Short=AtHMGbeta1; Short=HMG
beta 1; AltName: Full=Nucleosome/chromatin assembly
factor group D 02; Short=Nucleosome/chromatin assembly
factor group D 2
gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein [Arabidopsis thaliana]
gi|2832359|emb|CAA74401.1| HMG protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis thaliana]
gi|21536964|gb|AAM61305.1| unknown [Arabidopsis thaliana]
gi|26452113|dbj|BAC43146.1| unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein [Arabidopsis thaliana]
gi|332191885|gb|AEE30006.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFR++FK+ P NKSVA +GKA G KWKS+S++EKAPYV KA
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 92
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K EYE ++AY K+L + G E+S KS SEV
Sbjct: 93 EKRKVEYEKNIKAYNKKL-EEGPKEDEESDKSVSEV 127
>gi|145323960|ref|NP_001077569.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|332191887|gb|AEE30008.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 143
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFR++FK+ P NKSVA +GKA G KWKS+S++EKAPYV KA
Sbjct: 33 KDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKA 92
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K EYE ++AY K+L + G E+S KS SEV
Sbjct: 93 EKRKVEYEKNIKAYNKKL-EEGPKEDEESDKSVSEV 127
>gi|295913099|gb|ADG57812.1| transcription factor [Lycoris longituba]
Length = 120
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 78/104 (75%), Gaps = 5/104 (4%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
KAGK D N PKR SA+F+FMEDFRK FKE P NKSVAA+GKAGG++WKSMS+AEKAP
Sbjct: 2 KAGK--DPNKPKRAPSAFFVFMEDFRKEFKEKNPKNKSVAAVGKAGGERWKSMSDAEKAP 59
Query: 92 YVQKALNKKAEYELALEAYKK--QLNDNGAGV-SEDSWKSTSEV 132
+V+KA KAEYE + AY K ++ D+ A V E+S KS SEV
Sbjct: 60 FVKKAEKLKAEYEKKMVAYNKGEKVKDDNADVEEEESDKSKSEV 103
>gi|116790306|gb|ABK25570.1| unknown [Picea sitchensis]
gi|224286844|gb|ACN41125.1| unknown [Picea sitchensis]
gi|294461904|gb|ADE76508.1| unknown [Picea sitchensis]
Length = 151
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 74/95 (77%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+F+++FRK +K++ P+ SV+A+GKAGG+KW+++S+AEKAPYV KA
Sbjct: 42 DPNKPKRPPSAFFVFLDEFRKEYKQANPNANSVSAVGKAGGEKWRALSDAEKAPYVAKAE 101
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
KKAEYE ++ Y KQ + N V+E+S KS SEV
Sbjct: 102 KKKAEYEKSMATYNKQKDSNTEEVAEESDKSKSEV 136
>gi|225457566|ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK +KE P NKSV+ +GKAGG KWKSMSEAEKAPYV KA
Sbjct: 40 DPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAE 99
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSE--DSWKSTSEV 132
+K EYE ++AY K+ + V E +S KS SEV
Sbjct: 100 KRKVEYEKNMKAYNKKQAEGTKVVEEEDESEKSLSEV 136
>gi|449455609|ref|XP_004145545.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449511984|ref|XP_004164108.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Cucumis sativus]
gi|449511988|ref|XP_004164109.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Cucumis sativus]
Length = 146
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK F E P+NK+V+A+GKA GQKWKSMS+AEKAPY+ KA
Sbjct: 35 DPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSDAEKAPYIAKAD 94
Query: 98 NKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
+K EYE ++AY KKQ + A ++S KS SEV
Sbjct: 95 KRKVEYEKNMKAYNKKQASGANAAEEDESEKSMSEV 130
>gi|312281849|dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
Length = 185
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 75/97 (77%), Gaps = 4/97 (4%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR SA+F+F+EDFR++FK+ P+ K+V+A+GKAGGQKWKSMS+AEKAPY +K
Sbjct: 47 KKDPNKPKRAPSAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEK 106
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
A +KAEYE ++AY K + + S++S KS SEV
Sbjct: 107 AAKRKAEYEKLMDAYNKNMEEG----SDESEKSRSEV 139
>gi|15231065|ref|NP_190756.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|145332807|ref|NP_001078269.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|75274976|sp|O49595.1|HMGB1_ARATH RecName: Full=High mobility group B protein 1; AltName: Full=High
mobility group protein A; Short=AtHMGalpha; Short=HMG
alpha; AltName: Full=Nucleosome/chromatin assembly
factor group D 01; Short=Nucleosome/chromatin assembly
factor group D 1
gi|2832357|emb|CAA74400.1| HMG protein [Arabidopsis thaliana]
gi|3068715|gb|AAC14415.1| unknown [Arabidopsis thaliana]
gi|15912191|gb|AAL08229.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|21360557|gb|AAM47475.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|332645334|gb|AEE78855.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645336|gb|AEE78857.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 178
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 77/112 (68%), Gaps = 14/112 (12%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR SA+F+F+EDFR +FK+ P+ K+V+A+GKAGGQKWKSMS+AEKAPY +K
Sbjct: 47 KKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEK 106
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
A +KAEYE ++AY K L + G+ SE S SEINDE E
Sbjct: 107 AAKRKAEYEKQMDAYNKNL-EEGSDESE-------------KSRSEINDEDE 144
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Query: 10 AQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS 69
A KP + LK RK +K+ KD N PKRP SA+F+FM DFR+ +K+ P+NKS
Sbjct: 6 ADSKPADNRLK-RKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKS 64
Query: 70 VAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKST 129
VAA+GKA G+ WKSMSE +KAPY +AL KK EYE+A +AY K+L G + S KS
Sbjct: 65 VAAVGKACGEAWKSMSEEDKAPYAARALKKKEEYEVATQAYNKKL--EGKDEEDGSDKSK 122
Query: 130 SEV 132
SEV
Sbjct: 123 SEV 125
>gi|334185909|ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645337|gb|AEE78858.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 161
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 74/97 (76%), Gaps = 4/97 (4%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR SA+F+F+EDFR +FK+ P+ K+V+A+GKAGGQKWKSMS+AEKAPY +K
Sbjct: 47 KKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEK 106
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
A +KAEYE ++AY K L + S++S KS SE+
Sbjct: 107 AAKRKAEYEKQMDAYNKNLEEG----SDESEKSRSEI 139
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK++KE P+NKSVA +GKAGG KWK +S+ EKAPY KA
Sbjct: 31 KDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKA 90
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQ 133
+KAEY+ ++AY K+L G E+S KS SEV
Sbjct: 91 EKRKAEYQKNMDAYNKKLA-AGDADDEESDKSKSEVH 126
>gi|388497528|gb|AFK36830.1| unknown [Medicago truncatula]
Length = 155
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK FK+ PDNK+V+A+GKA G KWKS+SEAEKAPY KA
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKA 99
Query: 97 LNKKAEYELALEAYKKQLNDNGAGV 121
+KAEYE ++AY K+ + A V
Sbjct: 100 EKRKAEYEKTMKAYNKKQAEGPAAV 124
>gi|359476975|ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
vinifera]
Length = 125
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKEKA K D N PKRP SA+F+FME+FRK +KE P NKSV+ +GKAGG KWKS+SEAE
Sbjct: 36 KKEKAVK--DPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAE 93
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLNDN 117
KAPYV KA +K EY +++AY K++ ++
Sbjct: 94 KAPYVAKAEKRKTEYNKSMQAYNKRMEED 122
>gi|388497036|gb|AFK36584.1| unknown [Medicago truncatula]
Length = 155
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK FK+ PDNK+V+A+GKA G KWKS+SEAEKAPY KA
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKA 99
Query: 97 LNKKAEYELALEAYKKQLNDNGAGV 121
+KAEYE ++AY K+ + A V
Sbjct: 100 EKRKAEYEKTMKAYNKKQAEGPAAV 124
>gi|116781378|gb|ABK22074.1| unknown [Picea sitchensis]
gi|224284710|gb|ACN40086.1| unknown [Picea sitchensis]
Length = 154
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
Query: 24 AENKPKKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKW 81
A+ KP K +A K KD N PKRP +A+F+++E+FRK+FK+ PD K V A+GKA G KW
Sbjct: 28 AKEKPNKRQAKPKAVKDPNQPKRPPTAFFVYLEEFRKTFKQKHPDVKGVTAVGKACGDKW 87
Query: 82 KSMSEAEKAPYVQKALNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
K MSEAEKAPY+ KA K+AEY++ + AY KKQ + E+S KS SE+
Sbjct: 88 KEMSEAEKAPYLAKAAQKRAEYDVTMTAYKKKQEVGVQSATPEESEKSKSEL 139
>gi|449456873|ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 63/77 (81%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK +K+ P+NKSVAA+GKAGG KWKSMS+AEKAPY+ KA
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAE 93
Query: 98 NKKAEYELALEAYKKQL 114
+K EY +++AY K++
Sbjct: 94 KRKTEYNKSMQAYNKRI 110
>gi|351725757|ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycine max]
gi|255628371|gb|ACU14530.1| unknown [Glycine max]
Length = 139
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FM +FR+ FK+ P+NKSVA +GKAGG+KWKS+S+AEKAP+V A
Sbjct: 32 KDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEKAPFVATA 91
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSED-SWKSTSEV 132
KK EYE + AY KQL G ED S KS SEV
Sbjct: 92 EKKKQEYEKTISAYNKQL--EGKNSEEDESDKSKSEV 126
>gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FR+ +K+ P NKSVAA+GKAGG KWKS+SEAEKAPYV KA
Sbjct: 31 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKAE 90
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K EYE ++AY K+ + +S KS SEV
Sbjct: 91 KRKVEYEKNMKAYNKRQAEGPKDEDVESDKSVSEV 125
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
Query: 13 KPHADMLKARKAENKPKKEKAGKK-----KDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
K +D A+ + NK KAGKK KD N PKRP SA+F+FME+FR+ +K+ P N
Sbjct: 5 KSKSDAKSAKLSVNKKSTTKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKN 64
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
KSVAA+GKAGG KWKS+SEAEK PYV KA +K EYE ++AY K+
Sbjct: 65 KSVAAVGKAGGDKWKSLSEAEKRPYVDKAEKRKVEYEKNMKAYNKR 110
>gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 82/142 (57%), Gaps = 24/142 (16%)
Query: 9 VAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
+A KK AD K +KA KD N PKRP SA+F+FMEDFRK++KE P+NK
Sbjct: 14 LAVKKQAADTKKTKKAV-----------KDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNK 62
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY-KKQLNDNGAGVSEDSWK 127
SVA +GKAGG KWK ++ AEKAP++ KA +K EYE L+AY KKQ D
Sbjct: 63 SVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAGAAEEEESD--- 119
Query: 128 STSEVQSGKSSSSEINDEAEQE 149
S SE+ND+ E +
Sbjct: 120 ---------KSRSEVNDDDEDQ 132
>gi|238013344|gb|ACR37707.1| unknown [Zea mays]
gi|414590135|tpg|DAA40706.1| TPA: HMG1/2-like protein [Zea mays]
Length = 127
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 69/105 (65%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP +A+F+FME+FRK +KE P+ K V+ +GKAGG WKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSE 141
K EY ++AY + + G +S DS KS SEV G E
Sbjct: 83 EKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKSEVNDGDEEGDE 127
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 15/132 (11%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
++KA K +P K+ KKD N PKRP SA+F+F+E+FRK +K P+ K+V+A+GKAG
Sbjct: 31 VVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAG 90
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWK--STSEVQSG 135
G+KWKS+S AEKAPY KA +KAEYE + AY DS K S ++ +
Sbjct: 91 GEKWKSLSHAEKAPYEAKAAKRKAEYEKLMRAY-------------DSKKVASAADDEES 137
Query: 136 KSSSSEINDEAE 147
+ S SE+NDE E
Sbjct: 138 ERSKSEVNDEDE 149
>gi|304651500|gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 61/76 (80%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FR+ +K+ P NKSVAA+GKAGG KWKS+SEAEKAPYV KA
Sbjct: 34 KDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKA 93
Query: 97 LNKKAEYELALEAYKK 112
+K EYE L+AY K
Sbjct: 94 EKRKVEYEKKLKAYNK 109
>gi|226505018|ref|NP_001151148.1| LOC100284781 [Zea mays]
gi|195644628|gb|ACG41782.1| HMG1/2-like protein [Zea mays]
Length = 127
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 68/105 (64%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP + +F+FME+FRK +KE P+ K V+ +GKAGG WKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPTTFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSE 141
K EY ++AY + + G +S DS KS SEV G E
Sbjct: 83 EKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKSEVNDGDEEGDE 127
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK++KE P+NKSVAA+GKAGG WK +SEAEKAPY KA
Sbjct: 32 DPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAE 91
Query: 98 NKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEVQ 133
+KAEY+ ++AY +KQ D ++S KS SEV
Sbjct: 92 KRKAEYQKNMDAYNRKQAGD---AEEDESDKSKSEVH 125
>gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba var. minor]
Length = 74
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FM DFR+ +K+ P+NKSVAA+GKA G++WKS+SE EKAPYV +A
Sbjct: 1 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 60
Query: 97 LNKKAEYELALEAY 110
L KK EYE+ L+AY
Sbjct: 61 LKKKEEYEITLQAY 74
>gi|224083306|ref|XP_002306980.1| high mobility group family [Populus trichocarpa]
gi|222856429|gb|EEE93976.1| high mobility group family [Populus trichocarpa]
Length = 160
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FR+ +K P NKSVAA+GKAGG KWKS+SEAEKAP+V KA
Sbjct: 39 KDPNKPKRPASAFFVFMEEFREQYKREHPKNKSVAAVGKAGGDKWKSLSEAEKAPFVAKA 98
Query: 97 LNKKAEYELALEAYKKQ 113
+K EYE ++AY K+
Sbjct: 99 DKRKVEYEKKMKAYNKE 115
>gi|357484151|ref|XP_003612362.1| HMG1/2-like protein [Medicago truncatula]
gi|355513697|gb|AES95320.1| HMG1/2-like protein [Medicago truncatula]
Length = 140
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Query: 8 AVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
AV+ KP + LK + A K+ K K KD N PKRP SA+F+FM +FR+ FK+ P N
Sbjct: 4 AVSDAKPADNRLKRKGAGTGTKQSK--KAKDPNKPKRPPSAFFVFMSEFRERFKKENPSN 61
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWK 127
KSVA +GKAGG++WK++S+A+KAP++ KA K EYE + AY + + A E S K
Sbjct: 62 KSVAVVGKAGGKEWKALSDADKAPFIAKADKLKEEYEKTMRAYNMGITEKNASEEEGSEK 121
Query: 128 STSEV 132
S SEV
Sbjct: 122 SKSEV 126
>gi|359484115|ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera]
gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 7 VAVAQKKPHADMLKARKAENKPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFP 65
V +KKP A+ A E KPKK + +K KD N PKRP +A+F+FM+DFRK +KES P
Sbjct: 64 VTDVKKKP-AEKKNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKESNP 122
Query: 66 DNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
D+K+V+ + K GG+KWKSM++ EK PYV KA KAEY+ A+E Y
Sbjct: 123 DSKNVSVVAKEGGEKWKSMTDEEKKPYVDKAAELKAEYDKAMETY 167
>gi|388504718|gb|AFK40425.1| unknown [Lotus japonicus]
Length = 152
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 62/77 (80%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK F + P+NK+V+A+GKA G KWKSMSEAEKAPYV KA
Sbjct: 39 KDPNKPKRPPSAFFVFMEDFRKIFNKENPENKAVSAVGKAAGAKWKSMSEAEKAPYVAKA 98
Query: 97 LNKKAEYELALEAYKKQ 113
+KA+YE ++AY K+
Sbjct: 99 EKRKADYEKTMKAYNKK 115
>gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi]
Length = 141
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK F + P+NK+V+A+GKA G KWK MS+AEKAPYV K+
Sbjct: 28 KDPNKPKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVAKS 87
Query: 97 LNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
+K +YE + AY KKQ G E+S KS SEV
Sbjct: 88 EKRKQDYEKNMRAYNKKQAEGPTGGDEEESDKSISEV 124
>gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK FK+ DNK+V+A+GKA G KWKSM+EAEKAPY KA
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKA 99
Query: 97 LNKKAEYELALEAYKKQLNDNGAGV 121
+KAEYE ++++Y K+ + A V
Sbjct: 100 EKRKAEYEKSMKSYNKKQAEGPAAV 124
>gi|295913196|gb|ADG57857.1| transcription factor [Lycoris longituba]
Length = 143
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
KAGK D N PKRP SA+F+FME FRK FK+ P NKS+AA+GKAGG++WKSMS++EKAP
Sbjct: 25 KAGK--DPNKPKRPPSAFFVFMEGFRKEFKDKNPKNKSIAAVGKAGGERWKSMSDSEKAP 82
Query: 92 YVQKALNKKAEYELALEAYKK--QLNDNGAGV-SEDSWKSTSEVQ 133
+V KA KAEY + A+ K +L D+ A + E+S KS SEV
Sbjct: 83 FVSKAEKLKAEYGKKMNAHNKGEKLRDDNAELEEEESDKSKSEVN 127
>gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681870|gb|EDQ68293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 62/76 (81%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP +A+FIF+ +FR+ FK+ P+ K VAA+GKAGG+KWKSMSEAEK PY+QKA+
Sbjct: 53 DPNAPKRPATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAV 112
Query: 98 NKKAEYELALEAYKKQ 113
KK+EY+ L AY K+
Sbjct: 113 QKKSEYDKTLSAYNKK 128
>gi|168032698|ref|XP_001768855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168032700|ref|XP_001768856.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679967|gb|EDQ66408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679968|gb|EDQ66409.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 110
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 81/121 (66%), Gaps = 16/121 (13%)
Query: 32 KAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
K GKK KD NAPKRP +A+FIF+ +FR+ FK P+ K V A+GKAGG+KWKSMSEAEK
Sbjct: 1 KGGKKLKDPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQ 60
Query: 91 PYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKS--SSSEINDEAEQ 148
P++ KA+ KK+EY+ + AY K+ + EV++ +S S SEIND+ ++
Sbjct: 61 PFMTKAVQKKSEYDKTISAYNKK-------------QDAEEVEAEESDKSKSEINDDEDE 107
Query: 149 E 149
E
Sbjct: 108 E 108
>gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Physcomitrella patens]
Length = 165
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 62/76 (81%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP +A+FIF+ +FR+ FK+ P+ K VAA+GKAGG+KWKSMSEAEK PY+QKA+
Sbjct: 53 DPNAPKRPATAFFIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAV 112
Query: 98 NKKAEYELALEAYKKQ 113
KK+EY+ L AY K+
Sbjct: 113 QKKSEYDKTLSAYNKK 128
>gi|1813329|dbj|BAA19156.1| HMG-1 [Canavalia gladiata]
Length = 141
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 68/96 (70%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FM +FR+ +K+ P NKSVA +GKAGG KWKS+S+AEKAP+V +A
Sbjct: 32 KDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKSVAVVGKAGGDKWKSLSDAEKAPFVARA 91
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
KK EY+ ++ AY ++L E S KS SEV
Sbjct: 92 EKKKEEYDKSILAYNRKLEGKNPSEEEKSDKSKSEV 127
>gi|295913113|gb|ADG57819.1| transcription factor [Lycoris longituba]
Length = 108
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK KAGK D N PKR SA+F+FME FRK FKE P NKSVAA+GKAGG+KWKSMS+AE
Sbjct: 29 KKVKAGK--DPNKPKRAASAFFVFMEGFRKEFKEKNPKNKSVAAVGKAGGEKWKSMSDAE 86
Query: 89 KAPYVQKALNKKAEYELALEAY 110
KAP+V+KA KAEYE + AY
Sbjct: 87 KAPFVKKAEKLKAEYEKKMVAY 108
>gi|22135473|gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
gi|194698578|gb|ACF83373.1| unknown [Zea mays]
gi|414886616|tpg|DAA62630.1| TPA: HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK +KE P+ K V+ +GKAGG KWKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
KAEY ++AY KQ D A S DS KS SEV
Sbjct: 83 EKLKAEYTKKIDAYNNKQSGDPTA--SGDSDKSKSEV 117
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 59/82 (71%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS EKAPY KA
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 97 LNKKAEYELALEAYKKQLNDNG 118
+KAEY + AY K+L D G
Sbjct: 101 AKRKAEYNKTMVAYNKKLADGG 122
>gi|295913475|gb|ADG57987.1| transcription factor [Lycoris longituba]
Length = 162
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 59/82 (71%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS EKAPY KA
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 97 LNKKAEYELALEAYKKQLNDNG 118
+KAEY + AY K+L D G
Sbjct: 101 AKRKAEYNKTMVAYNKKLADGG 122
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirsutum]
Length = 148
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 62/76 (81%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FR+ +K+ P NKSVAA+GKAGG+KWKS+S+AEKAPY+ KA
Sbjct: 35 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAE 94
Query: 98 NKKAEYELALEAYKKQ 113
+K EYE ++AY K+
Sbjct: 95 KRKVEYEKNMKAYTKR 110
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 59/82 (71%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS EKAPY KA
Sbjct: 69 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 128
Query: 97 LNKKAEYELALEAYKKQLNDNG 118
+KAEY + AY K+L D G
Sbjct: 129 AKRKAEYNKTMVAYNKKLADGG 150
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 59/82 (71%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS EKAPY KA
Sbjct: 54 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 113
Query: 97 LNKKAEYELALEAYKKQLNDNG 118
+KAEY + AY K+L D G
Sbjct: 114 AKRKAEYNKTMVAYNKKLADGG 135
>gi|162459697|ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
gi|17017392|gb|AAL33650.1|AF440221_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK +KE P+ K V+ +GKAGG KWKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIGKAGGDKWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
KAEY ++AY KQ D A S DS KS SEV
Sbjct: 83 EKLKAEYTKKIDAYNNKQSGDPTA--SGDSDKSKSEV 117
>gi|297836478|ref|XP_002886121.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
gi|297331961|gb|EFH62380.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
Query: 27 KPKKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
K + K GKK KD N PKRP SA+F+F+EDFRK F + P+NKSVA +GKA G +WKSM
Sbjct: 18 KTRGRKPGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSM 77
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYKKQL-NDNGAGVSEDSWKSTSEV 132
+E +KAPYV KA ++K EY ++ Y +L + G +DS KS SEV
Sbjct: 78 TEEDKAPYVAKAESRKTEYLKTMQQYNMKLASGTNRGEEDDSDKSKSEV 126
>gi|295913458|gb|ADG57979.1| transcription factor [Lycoris longituba]
Length = 179
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 59/82 (71%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS EKAPY KA
Sbjct: 59 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 118
Query: 97 LNKKAEYELALEAYKKQLNDNG 118
+KAEY + AY K+L D G
Sbjct: 119 AKRKAEYNKTMVAYNKKLADGG 140
>gi|414590134|tpg|DAA40705.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 120
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP +A+F+FME+FRK +KE P+ K V+ +GKAGG WKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSE 131
K EY ++AY + + G +S DS KS SE
Sbjct: 83 EKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKSE 117
>gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSF 60
MKG A A + RKA NK KKD N PKRP SA+F+F+EDFRK F
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGNK-------TKKDPNQPKRPPSAFFVFLEDFRKEF 53
Query: 61 KESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAG 120
+ P+NKSVA +GKA G +WKSM++ +KAPYV KA ++K EY ++ Y +L
Sbjct: 54 NLANPNNKSVATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNR 113
Query: 121 VSEDSWKSTSEVQSGKSSSSEINDE 145
+DS KS SEV S +D+
Sbjct: 114 EEDDSDKSKSEVDEAVSEEEAEDDD 138
>gi|2832355|emb|CAA74403.1| HMG protein [Arabidopsis thaliana]
Length = 138
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 27 KPKKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
K + KAGKK KD N PKRP SA+F+F+EDFRK F + P+NKSVA +GKA G +WKSM
Sbjct: 18 KTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSM 77
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIND 144
++ +KAPYV KA ++K EY ++ Y +L +DS KS SEV S +D
Sbjct: 78 TDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKSKSEVDEAVSEEEAEDD 137
Query: 145 E 145
+
Sbjct: 138 D 138
>gi|224065681|ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| high mobility group family [Populus trichocarpa]
Length = 152
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 60/76 (78%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FR+ +K+ P NKSVAA+GKAGG KWKS+S AEKAPYV KA
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 98 NKKAEYELALEAYKKQ 113
+K EYE ++AY K+
Sbjct: 99 KRKVEYEKKMKAYNKE 114
>gi|356508616|ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine max]
Length = 152
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK F + PDNK+V+A+GKA G KWK+MS+AEKAPYV K+
Sbjct: 39 KDPNKPKRPPSAFFVFMEEFRKVFNKEHPDNKAVSAVGKAAGAKWKTMSDAEKAPYVAKS 98
Query: 97 LNKKAEYELALEAYKKQLNDNGAG 120
+K EYE + AY K+ + G
Sbjct: 99 EKRKVEYEKNMRAYNKKQAEGPTG 122
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 60/76 (78%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FR+ +K+ P NKSVAA+GKAGG KWKS+S AEKAPYV KA
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 98 NKKAEYELALEAYKKQ 113
+K EYE ++AY K+
Sbjct: 99 KRKVEYEKKMKAYNKE 114
>gi|414886617|tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 119
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK +KE P+ K V+ +GKAGG KWKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSE 131
KAEY ++AY KQ D A S DS KS SE
Sbjct: 83 EKLKAEYTKKIDAYNNKQSGDPTA--SGDSDKSKSE 116
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 145
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 60/75 (80%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FR+ +K+ P NKSVAA+GKAGG +WKSMSE+EKAP+V KA
Sbjct: 34 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDRWKSMSESEKAPFVAKAE 93
Query: 98 NKKAEYELALEAYKK 112
+K EYE L+AY K
Sbjct: 94 KRKIEYEKKLKAYNK 108
>gi|115470082|ref|NP_001058640.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sativa Japonica Group]
gi|23345287|gb|AAN28722.1| HMG1 protein [Oryza sativa Indica Group]
gi|30267833|gb|AAP21609.1| HMGB1 [Oryza sativa Indica Group]
gi|54291150|dbj|BAD61823.1| HMGB1 [Oryza sativa Japonica Group]
gi|113596680|dbj|BAF20554.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|213959190|gb|ACJ54929.1| HMG protein [Oryza sativa Japonica Group]
gi|215692803|dbj|BAG88247.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636260|gb|EEE66392.1| hypothetical protein OsJ_22728 [Oryza sativa Japonica Group]
Length = 157
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 75/116 (64%), Gaps = 8/116 (6%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKP----KKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
MKG + A KP A + K KP +K KAGK D N PKR SA+F+FME+F
Sbjct: 1 MKGAKSKGAA--KPDAKLAVKSKGAEKPAAKGRKGKAGK--DPNKPKRAPSAFFVFMEEF 56
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
RK FKE P NKSVAA+GKA G +WKS++EA+KAPYV KA KAEY A+ AY K
Sbjct: 57 RKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNK 112
>gi|115480551|ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa Japonica Group]
gi|113632102|dbj|BAF25783.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|213959176|gb|ACJ54922.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215694881|dbj|BAG90072.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 127
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME FRK +KE P+ K V+ +GKAGG KWKSM++A+KAP+V KA
Sbjct: 23 KDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKA 82
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
KAEY ++AY + G S DS KS SEV
Sbjct: 83 EKLKAEYTKKIDAYNNKQA-GGPATSGDSDKSKSEV 117
>gi|414590133|tpg|DAA40704.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 140
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP +A+F+FME+FRK +KE P+ K V+ +GKAGG WKS+S+AEKAPYV KA
Sbjct: 43 KDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMWKSLSDAEKAPYVSKA 102
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSE 131
K EY ++AY + + G +S DS KS SE
Sbjct: 103 EKLKVEYTKKMDAYNNKQSGGGPTLSGDSDKSKSE 137
>gi|346467547|gb|AEO33618.1| hypothetical protein [Amblyomma maculatum]
Length = 146
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 5/111 (4%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK K KD N PKR SA+F+F+++FRK FKE P+NKSVAA+ KAGG +WKSMS+A+
Sbjct: 29 KKGKTKAAKDPNKPKRAPSAFFVFLDEFRKEFKEKNPENKSVAAVTKAGGARWKSMSDAD 88
Query: 89 KAPYVQKALNKKAEYELALEAYKK----QLNDNGAGVSEDSWKSTSEVQSG 135
K PYV KA K EY+ ++AY+K + DN A + E+S KS SEV SG
Sbjct: 89 KEPYVSKADKLKVEYQKKVKAYEKGQAHEPEDN-AEMDEESDKSKSEVNSG 138
>gi|449464956|ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
Length = 207
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 6/96 (6%)
Query: 20 KARKAENKPKK-----EKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAM 73
K R A ++PK EK GKK KD NAPKRP +A+FIFM+DFRKS+KE+ PD+K V +
Sbjct: 83 KKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVKEV 142
Query: 74 GKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEA 109
K GG+KWKSM++ EK PY KA KAEYE ALE+
Sbjct: 143 AKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALES 178
>gi|371721822|gb|AEX55234.1| HMG transcription factor [Allium sativum]
Length = 115
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 59/78 (75%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRP SA+F+FMEDFRK FKE PDNK V+A+GKA G KWKS++ AEKAPY KA +KA
Sbjct: 2 PKRPPSAFFVFMEDFRKIFKEKNPDNKQVSAVGKAAGDKWKSLTAAEKAPYEAKAAKRKA 61
Query: 102 EYELALEAYKKQLNDNGA 119
EY + AY K+L+D +
Sbjct: 62 EYTKTMAAYNKKLSDGAS 79
>gi|15227862|ref|NP_179347.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|145323080|ref|NP_001031364.2| high mobility group B4 protein [Arabidopsis thaliana]
gi|310947092|sp|Q42344.1|HMGB4_ARATH RecName: Full=High mobility group B protein 4; AltName: Full=High
mobility group protein G; Short=AtHMGgamma; Short=HMG
gamma; AltName: Full=Nucleosome/chromatin assembly
factor group D 04; Short=Nucleosome/chromatin assembly
factor group D 4
gi|13926177|gb|AAK49570.1|AF370562_1 putative HMG protein [Arabidopsis thaliana]
gi|4914377|gb|AAD32913.1| putative HMG protein [Arabidopsis thaliana]
gi|23297615|gb|AAN12992.1| putative HMG protein [Arabidopsis thaliana]
gi|330251557|gb|AEC06651.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|330251558|gb|AEC06652.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 138
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 27 KPKKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
K + KAGKK KD N PKRP SA+F+F+EDFRK F + P+NKSVA +GKA G +WK+M
Sbjct: 18 KTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAM 77
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIND 144
++ +KAPYV KA ++K EY ++ Y +L +DS KS SEV S +D
Sbjct: 78 TDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKSKSEVDEAVSEEEAEDD 137
Query: 145 E 145
+
Sbjct: 138 D 138
>gi|145328748|ref|NP_001077909.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|222423535|dbj|BAH19737.1| AT2G17560 [Arabidopsis thaliana]
gi|330251559|gb|AEC06653.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 134
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 27 KPKKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
K + KAGKK KD N PKRP SA+F+F+EDFRK F + P+NKSVA +GKA G +WK+M
Sbjct: 18 KTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAM 77
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
++ +KAPYV KA ++K EY ++ Y +L +DS KS SEV
Sbjct: 78 TDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKSKSEV 125
>gi|194466165|gb|ACF74313.1| high mobility group protein 2 [Arachis hypogaea]
Length = 153
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N KRP SA+F+FME+FRK F + P+NK+V+A+GKA G KWK MS+AEKAPYV K+
Sbjct: 40 KDPNKLKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVAKS 99
Query: 97 LNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
+K +YE + AY KKQ G E+S KS SEV
Sbjct: 100 EKRKQDYEKNMRAYNKKQAEGPTGGDEEESDKSISEV 136
>gi|295913393|gb|ADG57949.1| transcription factor [Lycoris longituba]
Length = 162
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 58/82 (70%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS AEKAPY KA
Sbjct: 42 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 101
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
+K +Y + AY K+L D G
Sbjct: 102 KRKVDYNKTMVAYNKKLADGGG 123
>gi|351723773|ref|NP_001235499.1| uncharacterized protein LOC100305957 [Glycine max]
gi|255627099|gb|ACU13894.1| unknown [Glycine max]
Length = 142
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PK P SA+F+FM +FR+ FK+ P+NKSVA +GKAGG KWKS+S+AEKAP+V A
Sbjct: 32 KDPNKPKGPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGDKWKSLSDAEKAPFVATA 91
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSED-SWKSTSEV 132
KK EYE + AY K+L G ED S KS SEV
Sbjct: 92 EKKKQEYEKTILAYNKKL--EGKNSEEDESDKSKSEV 126
>gi|359386154|gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
Length = 165
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 71/96 (73%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
+LKA ++ NK K KKD N PKRP SA+F+F+E+FRK +K+ P+ K+V+A+GKAG
Sbjct: 32 VLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAG 91
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
G+KWKS+++AEKAP+ KA +K +YE + AY K+
Sbjct: 92 GEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
>gi|157382896|gb|ABV48883.1| high mobility group protein B1 [Physcomitrella patens]
Length = 215
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KDS+ PKRP SAYFIFME FRK FK + PD K V A KAGG+KW SMSE EKAPYV +A
Sbjct: 132 KDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVAEA 191
Query: 97 LNKKAEYELALEAYK 111
+K +YE A+ AYK
Sbjct: 192 SVRKGQYEQAMTAYK 206
>gi|357159916|ref|XP_003578598.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 128
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 71/111 (63%), Gaps = 11/111 (9%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME FRK +KE PD K V+ +GKAGG +WKS+S+AEKAP+V KA
Sbjct: 23 KDPNQPKRPPSAFFVFMEGFRKDYKEKHPDVKQVSVVGKAGGAEWKSLSDAEKAPFVAKA 82
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
KAEY + AY N+ AG E S S S SE+NDEA+
Sbjct: 83 EKLKAEYNKKMVAY----NNPQAGGQEASGDSD-------KSKSEVNDEAD 122
>gi|168050181|ref|XP_001777538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671023|gb|EDQ57581.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 56/75 (74%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KDS+ PKRP SAYFIFME FRK FK + PD K V A KAGG+KW SMSE EKAPYV +A
Sbjct: 188 KDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVAEA 247
Query: 97 LNKKAEYELALEAYK 111
+K +YE A+ AYK
Sbjct: 248 SVRKGQYEQAMTAYK 262
>gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis]
Length = 220
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 28 PKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
PKK KK +D N PK+P +A+F+FM+DFRK++KE+ PD K A +GK GG KWK+MS+
Sbjct: 93 PKKRTREKKARDPNQPKKPATAFFVFMDDFRKTYKETNPDVKGAAQVGKEGGLKWKAMSD 152
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSS-EINDE 145
+K PY++KA KAEYE A+ Y++ L D A S+ E + KS + ++NDE
Sbjct: 153 EDKKPYLEKAAELKAEYEKAMSKYQQDLKDEAAKSSD-----GGEDEVAKSDADGDVNDE 207
>gi|295913696|gb|ADG58089.1| transcription factor [Lycoris longituba]
Length = 183
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS AEKAPY KA
Sbjct: 63 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 122
Query: 98 NKKAEYELALEAYKKQLNDNGAG 120
+K +Y + AY K+L D GAG
Sbjct: 123 KRKVDYNKTMVAYNKKLAD-GAG 144
>gi|351725567|ref|NP_001236841.1| HMG1/2-like protein [Glycine max]
gi|123379|sp|P26585.1|HMGL_SOYBN RecName: Full=HMG1/2-like protein; AltName: Full=Protein SB11
gi|18645|emb|CAA41200.1| HMG-1 like protein gene [Glycine max]
Length = 152
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 62/84 (73%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK F + P+NK+V+A+GKA G KWK+MS+AEKAPYV K+
Sbjct: 39 KDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKS 98
Query: 97 LNKKAEYELALEAYKKQLNDNGAG 120
+K EYE + AY K+ + G
Sbjct: 99 EKRKVEYEKNMRAYNKKQAEGPTG 122
>gi|302754440|ref|XP_002960644.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
gi|300171583|gb|EFJ38183.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
Length = 134
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PK+P +A+FIF+E+FR+++K+ PD K VAA+GKAGG WKS+S+ EK PY KA
Sbjct: 32 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 91
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSE 123
+KA+Y+ LEAY K+ D AG SE
Sbjct: 92 KRKADYDKDLEAYNKKKEDGSAGESE 117
>gi|225448398|ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
vinifera]
gi|147854340|emb|CAN83423.1| hypothetical protein VITISV_023376 [Vitis vinifera]
Length = 166
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 69/95 (72%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+F+E+FRK +K+ P+ K+V+A+GKAGG+KWKS+SEA+KAPY KA
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAA 111
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K++YE + AY K+ E+S +S SEV
Sbjct: 112 KRKSDYEKLMAAYNKKQESMADDDEEESDRSKSEV 146
>gi|295913307|gb|ADG57910.1| transcription factor [Lycoris longituba]
Length = 138
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS AEKAPY KA
Sbjct: 18 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 77
Query: 98 NKKAEYELALEAYKKQLNDNGAG 120
+K +Y + AY K+L D GAG
Sbjct: 78 KRKVDYNKTMVAYNKKLAD-GAG 99
>gi|414886615|tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 123
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 57/74 (77%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK +KE P+ K V+ +GKAGG KWKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAY 110
KAEY ++AY
Sbjct: 83 EKLKAEYTKKIDAY 96
>gi|13877775|gb|AAK43965.1|AF370150_1 putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 27 KPKKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
K + KAGKK KD N PKRP SA+F+F+EDFRK F + P+NKSVA +GKA G +WK+M
Sbjct: 18 KTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAM 77
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIND 144
++ +KAPYV KA + K EY ++ Y +L +DS KS SEV S +D
Sbjct: 78 TDEDKAPYVAKAESIKTEYIKNVQQYNLKLASGTNREEDDSDKSKSEVDEAVSEEEAEDD 137
Query: 145 E 145
+
Sbjct: 138 D 138
>gi|407971018|ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
gi|255625939|gb|ACU13314.1| unknown [Glycine max]
Length = 166
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 80/117 (68%), Gaps = 9/117 (7%)
Query: 22 RKAENKPKKEKA-----GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
RKA KP + A KKD N PKRP SA+F+F+E+FRK+FK P+ K+V+ +GKA
Sbjct: 28 RKASGKPGRSSAPKKEKKAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSVVGKA 87
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEV 132
GG+KWKS+S AEKAPY KA +KAEYE ++AY KKQ + + E+S KS SEV
Sbjct: 88 GGEKWKSLSSAEKAPYESKAAKRKAEYEKLIKAYDKKQAS---SADDEESDKSKSEV 141
>gi|414886614|tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 118
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 57/74 (77%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK +KE P+ K V+ +GKAGG KWKS+S+AEKAPYV KA
Sbjct: 23 KDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAPYVSKA 82
Query: 97 LNKKAEYELALEAY 110
KAEY ++AY
Sbjct: 83 EKLKAEYTKKIDAY 96
>gi|255574381|ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223532493|gb|EEF34283.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 171
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 64/95 (67%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+F+E+FRK+FK+ P SVAA+GKAGG KWKSMS AEKAPY KA
Sbjct: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAA 110
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
KK EY + AY K+ E+S +S SEV
Sbjct: 111 KKKDEYGKLMNAYNKKQESTADDGEEESDRSKSEV 145
>gi|194466163|gb|ACF74312.1| high mobility group protein 1 [Arachis hypogaea]
Length = 139
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 82/119 (68%), Gaps = 7/119 (5%)
Query: 21 ARKAENKPKKEKAG-------KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAM 73
A+ A+N+ K++ AG K KD N PKRP SA+F+FM +FR+ +K+ P+NKSVA +
Sbjct: 8 AKAADNRLKRKGAGTGRKQAKKAKDPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVAVV 67
Query: 74 GKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
GKAGG +WKSMS+A+KAPY KA KK EYE ++AY K+ GA ++S KS SEV
Sbjct: 68 GKAGGDRWKSMSDADKAPYQAKAEKKKEEYERTMQAYNKKQESKGASEEDESDKSKSEV 126
>gi|357123079|ref|XP_003563240.1| PREDICTED: DNA-binding protein MNB1B-like [Brachypodium distachyon]
Length = 160
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A K K +K KAGK D N PKR SA+F+FM++FRK FKE P NKSVAA+GKA G++
Sbjct: 23 AEKPAAKGRKGKAGK--DPNKPKRAPSAFFVFMDEFRKEFKEKNPKNKSVAAVGKAAGER 80
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
WK++SE++KAPYV KA KAEY A+ AY K
Sbjct: 81 WKTLSESDKAPYVAKANKLKAEYNKAIAAYNK 112
>gi|351725417|ref|NP_001235556.1| uncharacterized protein LOC100305961 [Glycine max]
gi|255627113|gb|ACU13901.1| unknown [Glycine max]
Length = 169
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 17/129 (13%)
Query: 22 RKAENKPKKEKA-----GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
RKA KP+K +A KKD N PKRP SA+ +F+E+FRK+FK P K+V+ +GKA
Sbjct: 28 RKASGKPEKSRAPKKEKKAKKDPNKPKRPPSAFLVFLEEFRKTFKAENPLVKAVSVVGKA 87
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGK 136
GG+KWKS+S AEKAPY KA +KAEYE ++AY+K+ S+++
Sbjct: 88 GGEKWKSLSSAEKAPYEAKAAKRKAEYEKLIKAYEKK------------QASSADDDESD 135
Query: 137 SSSSEINDE 145
S SE+NDE
Sbjct: 136 KSKSEVNDE 144
>gi|224112525|ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
gi|222865260|gb|EEF02391.1| high mobility group family [Populus trichocarpa]
Length = 176
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 71/95 (74%)
Query: 19 LKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGG 78
LKA ++ K K++ KKD N PKRP SA+F+F+E+FRK +K+ P+ K+V+A+GKAGG
Sbjct: 33 LKANESSKKRVKKEKITKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
+KWKS+S AEKAPY KA +K++YE + AY K+
Sbjct: 93 EKWKSLSAAEKAPYEAKAAKRKSDYEKLMTAYNKK 127
>gi|413935042|gb|AFW69593.1| high mobility group protein1 [Zea mays]
Length = 220
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 19 LKARKAENKPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
+K++ AE KP K + GK KD N PKR SA+F+FME+FRK FKE P NKSVAA+GKA
Sbjct: 18 VKSKGAE-KPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAA 76
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
G +WKS+SE++KAPYV KA K EY A+ AY K
Sbjct: 77 GDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNK 111
>gi|397396|emb|CAA46876.1| DNA-binding protein [Zea mays]
Length = 168
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKS 59
MKG + A K A + K KP K + GK KD N PKR SA+F+FME+FRK
Sbjct: 12 MKGAKSKGAA--KADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 69
Query: 60 FKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
FKE P NKSVAA+GKA G +WKS+SE++KAPYV KA K EY A+ AY K
Sbjct: 70 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNK 122
>gi|388522261|gb|AFK49192.1| unknown [Lotus japonicus]
Length = 173
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 71/110 (64%), Gaps = 11/110 (10%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
RP SA+F+F+EDFRK+FK P+ K V+A+GKAGG+KWKS+++AEKAPY KA +KAEY
Sbjct: 52 RPPSAFFVFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEY 111
Query: 104 ELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQ 153
E + AY + V E+S K S SEINDE E E S Q
Sbjct: 112 EKLINAYNNKQASTADDVDEESDK----------SKSEINDE-EDEASGQ 150
>gi|351722065|ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max]
gi|255628875|gb|ACU14782.1| unknown [Glycine max]
Length = 209
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP +A+F+F++DFRKSFKE+ PD+K V +GK G+KW+SM++ EK PY+ K
Sbjct: 99 DPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQ 153
K EYE A+E+Y+ ED S E ++++ E+ E E+E + +
Sbjct: 159 ELKEEYEKAMESYE------AGQDEEDQTVSDKETSDKEAAAKEVAIEVEEELTDE 208
>gi|388497798|gb|AFK36965.1| unknown [Medicago truncatula]
Length = 170
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+F+EDFRK+FK P+ K+V+A+GKAGG KWKS+++AEKAPY KA+
Sbjct: 47 DPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGGKWKSLTKAEKAPYEAKAV 106
Query: 98 NKKAEYELALEAY 110
+K EYE ++AY
Sbjct: 107 KRKVEYEKLMDAY 119
>gi|293335943|ref|NP_001167650.1| high mobility group protein1 [Zea mays]
gi|123378|sp|P27347.1|MNB1B_MAIZE RecName: Full=DNA-binding protein MNB1B; AltName: Full=HMG1-like
protein
gi|22329|emb|CAA41220.1| high mobility group protein [Zea mays]
gi|5441502|emb|CAB46752.1| HMGa protein [Zea mays]
gi|22347617|gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays]
gi|194701148|gb|ACF84658.1| unknown [Zea mays]
gi|194702316|gb|ACF85242.1| unknown [Zea mays]
gi|194703290|gb|ACF85729.1| unknown [Zea mays]
gi|195606194|gb|ACG24927.1| DNA-binding protein MNB1B [Zea mays]
gi|195612638|gb|ACG28149.1| DNA-binding protein MNB1B [Zea mays]
gi|195618138|gb|ACG30899.1| DNA-binding protein MNB1B [Zea mays]
gi|195618904|gb|ACG31282.1| DNA-binding protein MNB1B [Zea mays]
gi|195619012|gb|ACG31336.1| DNA-binding protein MNB1B [Zea mays]
gi|195619124|gb|ACG31392.1| DNA-binding protein MNB1B [Zea mays]
gi|195638824|gb|ACG38880.1| DNA-binding protein MNB1B [Zea mays]
gi|195642004|gb|ACG40470.1| DNA-binding protein MNB1B [Zea mays]
gi|223972731|gb|ACN30553.1| unknown [Zea mays]
gi|223972797|gb|ACN30586.1| unknown [Zea mays]
gi|223973279|gb|ACN30827.1| unknown [Zea mays]
gi|223974975|gb|ACN31675.1| unknown [Zea mays]
gi|413935043|gb|AFW69594.1| high mobility group protein1 [Zea mays]
Length = 157
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKS 59
MKG + A K A + K KP K + GK KD N PKR SA+F+FME+FRK
Sbjct: 1 MKGAKSKGAA--KADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 58
Query: 60 FKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
FKE P NKSVAA+GKA G +WKS+SE++KAPYV KA K EY A+ AY K
Sbjct: 59 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNK 111
>gi|157382900|gb|ABV48885.1| high mobility group protein B3 [Physcomitrella patens]
Length = 158
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 59/76 (77%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP +A+FIF+ +FR+ FK P+ K V A+GKAGG+KWKSMSEAEK P++ KA+
Sbjct: 49 DPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKAV 108
Query: 98 NKKAEYELALEAYKKQ 113
KK+EY+ + AY K+
Sbjct: 109 QKKSEYDKTISAYNKK 124
>gi|357506009|ref|XP_003623293.1| HMG1/2-like protein [Medicago truncatula]
gi|355498308|gb|AES79511.1| HMG1/2-like protein [Medicago truncatula]
gi|388511215|gb|AFK43669.1| unknown [Medicago truncatula]
Length = 170
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+F+EDFRK+FK P+ K+V+A+GKAGG+KWKS+++AEKAPY KA
Sbjct: 47 DPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAA 106
Query: 98 NKKAEYELALEAY 110
+K EYE + AY
Sbjct: 107 KRKVEYEKLMNAY 119
>gi|346467231|gb|AEO33460.1| hypothetical protein [Amblyomma maculatum]
Length = 115
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 70/96 (72%), Gaps = 4/96 (4%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP + +F+FME FRK +KE+ P NKSVA +GKAGG+KWKS+SE+EKA ++ KA
Sbjct: 7 KDPNKPKRPPTGFFVFMEGFRKQYKEAHPKNKSVAVVGKAGGEKWKSLSESEKAVFLSKA 66
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
++EY+ ++AY+K + + E+S KS SEV
Sbjct: 67 EKLRSEYQKKIDAYEKGQHVD----EEESDKSKSEV 98
>gi|218198917|gb|EEC81344.1| hypothetical protein OsI_24530 [Oryza sativa Indica Group]
Length = 163
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKP----KKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
MKG + A KP A + K KP +K KAGK D N PKR SA+F+FME+F
Sbjct: 1 MKGAKSKGAA--KPDAKLAVKSKGAEKPAAKGRKGKAGK--DPNKPKRAPSAFFVFMEEF 56
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELAL 107
RK FKE P NKSVAA+GKA G +WKS++EA+KAPYV KA KAEY L
Sbjct: 57 RKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNRPL 107
>gi|15237040|ref|NP_195282.1| high mobility group B5 protein [Arabidopsis thaliana]
gi|75219649|sp|O49597.1|HMGB5_ARATH RecName: Full=High mobility group B protein 5; AltName: Full=High
mobility group protein D; Short=AtHMGdelta; Short=HMG
delta; AltName: Full=Nucleosome/chromatin assembly
factor group D 05; Short=Nucleosome/chromatin assembly
factor group D 5
gi|2832363|emb|CAA74404.1| HMG protein [Arabidopsis thaliana]
gi|3367575|emb|CAA20027.1| HMG delta protein [Arabidopsis thaliana]
gi|7270508|emb|CAB80273.1| HMG delta protein [Arabidopsis thaliana]
gi|21553743|gb|AAM62836.1| HMG delta protein [Arabidopsis thaliana]
gi|98961063|gb|ABF59015.1| At4g35570 [Arabidopsis thaliana]
gi|222423786|dbj|BAH19859.1| AT4G35570 [Arabidopsis thaliana]
gi|332661132|gb|AEE86532.1| high mobility group B5 protein [Arabidopsis thaliana]
Length = 125
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 32 KAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
K GKK KD N PK+P S +F+F++DFRK F + PDNKSV +G+A G+KWK+M+E E+A
Sbjct: 23 KVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERA 82
Query: 91 PYVQKALNKKAEYELALEAYKKQLNDNGAGVSED 124
P+V K+ +KK EY + ++ Y +L + +D
Sbjct: 83 PFVAKSQSKKTEYAVTMQQYNMELANGNKTTGDD 116
>gi|255571919|ref|XP_002526902.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223533801|gb|EEF35533.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 190
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
N PKRP SA+F+F+EDFRK +K+ P+ K+V+A+GKAGG+KWKSMS AEK+P+ KA +
Sbjct: 54 NRPKRPPSAFFVFLEDFRKVYKQEHPNVKAVSAVGKAGGEKWKSMSNAEKSPFEAKAAKR 113
Query: 100 KAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKS---SSSEINDEAEQEFSSQVSS 156
K++YE + AY K+ D S++++ + S+ I + ++
Sbjct: 114 KSDYEKLMTAYNKKQESGDDQDDGDEESDGSKIEASRDDEESAEAIPLSPFKSLHRRICC 173
Query: 157 Y---FMGFYCFSSRN 168
+ F+G +C N
Sbjct: 174 FDFQFLGIFCLDQIN 188
>gi|225448400|ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
vinifera]
Length = 156
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 61/76 (80%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+F+E+FRK +K+ P+ K+V+A+GKAGG+KWKS+SEA+KAPY KA
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAA 111
Query: 98 NKKAEYELALEAYKKQ 113
+K++YE + AY K+
Sbjct: 112 KRKSDYEKLMAAYNKK 127
>gi|302803281|ref|XP_002983394.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
gi|300149079|gb|EFJ15736.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
Length = 123
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PK+P +A+FIF+E+FR+++K+ PD K VAA+GKAGG WKS+S+ EK PY KA
Sbjct: 18 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 77
Query: 98 NKKAEYELALEAY---KKQLNDNGAGVSE 123
+KA+Y+ LEAY K++ D AG SE
Sbjct: 78 KRKADYDKDLEAYNKKKEEEEDGSAGESE 106
>gi|125583208|gb|EAZ24139.1| hypothetical protein OsJ_07880 [Oryza sativa Japonica Group]
Length = 170
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 75/124 (60%), Gaps = 18/124 (14%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
MLKA K KK A S PKRP SA+F+FM +FR+ ++ + PDNKSVAA+ KA
Sbjct: 39 MLKAAGGAGKRKKAAA-----SGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAA 93
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYEL---------ALEAYKKQLNDNGAGVSEDSWKS 128
G+KW++MSE EKAPYV KA KK +YE + + K + +D+G G S KS
Sbjct: 94 GEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDGEG----SDKS 149
Query: 129 TSEV 132
SEV
Sbjct: 150 KSEV 153
>gi|388499756|gb|AFK37944.1| unknown [Lotus japonicus]
Length = 197
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 11 QKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV 70
+KKP + KA++A K EKA K +D N PKRP +A+F+F++DFRK FKE+ P +K V
Sbjct: 75 RKKPSSKEPKAKRA----KTEKAKKVEDPNQPKRPPTAFFVFLDDFRKEFKEANPGSKDV 130
Query: 71 AAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
+GK GG+KW++M++ EK PY++K K EYE A+ Y
Sbjct: 131 KRVGKEGGEKWRAMTDEEKKPYLEKVAELKEEYEKAMANY 170
>gi|47027098|gb|AAT08762.1| HMG transcription factor [Hyacinthus orientalis]
Length = 158
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 59/82 (71%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FMEDFRK FKE P+NK V+ +GKA KWK+MS AEKAP+ +A
Sbjct: 38 KDPNKPKRPPSAFFVFMEDFRKQFKEKNPNNKQVSVVGKACWGKWKTMSAAEKAPFEARA 97
Query: 97 LNKKAEYELALEAYKKQLNDNG 118
+KA+Y + AY K+ ++ G
Sbjct: 98 AKRKADYNKVMVAYNKKQSEGG 119
>gi|302790391|ref|XP_002976963.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
gi|300155441|gb|EFJ22073.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
Length = 156
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP +A+F+F+E++RK+FK+ P+ K VAA+GKAGG WK ++E EK PY KA
Sbjct: 51 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 110
Query: 98 NKKAEYELALEAYKKQ 113
KKA+YE L YKK+
Sbjct: 111 QKKADYEKTLTEYKKK 126
>gi|224098541|ref|XP_002311212.1| high mobility group family [Populus trichocarpa]
gi|222851032|gb|EEE88579.1| high mobility group family [Populus trichocarpa]
Length = 179
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 61/78 (78%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD + PKRP S++F+F+E+FRK +K+ P+ K+V+A+GKAGG+KWKSMS AEKAPY K
Sbjct: 50 KKDPDKPKRPPSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAK 109
Query: 96 ALNKKAEYELALEAYKKQ 113
A KK++Y + AY K+
Sbjct: 110 AAIKKSDYGKLMTAYSKK 127
>gi|118484946|gb|ABK94338.1| unknown [Populus trichocarpa]
Length = 171
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 61/78 (78%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD + PKRP S++F+F+E+FRK +K+ P+ K+V+A+GKAGG+KWKSMS AEKAPY K
Sbjct: 50 KKDPDKPKRPPSSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAK 109
Query: 96 ALNKKAEYELALEAYKKQ 113
A KK++Y + AY K+
Sbjct: 110 AAIKKSDYGKLMTAYSKK 127
>gi|106879575|emb|CAJ38371.1| HMG-protein [Plantago major]
Length = 212
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 66/90 (73%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
RP SA+F+F+E+FR++FK+ P+ K+V+A+GKAGG+KWKS+++AEKAPY KA +K+EY
Sbjct: 101 RPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEY 160
Query: 104 ELALEAYKKQLNDNGAGVSEDSWKSTSEVQ 133
E + AY K+ + E S KS SEV
Sbjct: 161 EKLMNAYNKKQESSADEADEGSEKSRSEVH 190
>gi|222642048|gb|EEE70180.1| hypothetical protein OsJ_30257 [Oryza sativa Japonica Group]
Length = 139
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 13/108 (12%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA--------- 87
KD N PKRP SA+F+FME FRK +KE P+ K V+ +GKAGG KWKSM++A
Sbjct: 23 KDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDAIRGYVVVAV 82
Query: 88 ---EKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+KAP+V KA KAEY ++AY + G S DS KS SEV
Sbjct: 83 PCKDKAPFVTKAEKLKAEYTKKIDAYNNK-QAGGPATSGDSDKSKSEV 129
>gi|302797885|ref|XP_002980703.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
gi|300151709|gb|EFJ18354.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
Length = 83
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP +A+F+F+E++RK+FK+ P+ K VAA+GKAGG WK ++E EK PY KA
Sbjct: 7 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 66
Query: 98 NKKAEYELALEAYKKQ 113
KKA+YE L YKK+
Sbjct: 67 QKKADYEKTLTEYKKK 82
>gi|125564627|gb|EAZ10007.1| hypothetical protein OsI_32309 [Oryza sativa Indica Group]
Length = 139
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 13/108 (12%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA--------- 87
KD N PKRP SA+F+FME FRK +KE P+ K V+ +GKAGG KWKSM++A
Sbjct: 23 KDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDAIGGYVVVAV 82
Query: 88 ---EKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+KAP+V KA KAEY ++AY + G S DS KS SEV
Sbjct: 83 PCKDKAPFVTKAEKLKAEYTKKIDAYNNK-QAGGPATSGDSDKSKSEV 129
>gi|356536465|ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 200
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP +A+F F++DFRKSFKE+ PD+K V +GK G+KW+SM++ EK PY+ K
Sbjct: 99 DPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 98 NKKAEYELALEAY 110
KAEYE A+E+Y
Sbjct: 159 ELKAEYEKAMESY 171
>gi|729738|sp|P40621.1|HMGL_WHEAT RecName: Full=HMG1/2-like protein
gi|21803|emb|CAA77641.1| high mobility group protein [Triticum aestivum]
gi|114145392|dbj|BAF30985.1| high mobility globular protein [Triticum aestivum]
Length = 161
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKR SA+F+FM +FR+ FK+ P NKSVAA+GKA G++WKS+SE+EKAPYV KA
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKAN 97
Query: 98 NKKAEYELALEAYKK 112
K EY A+ AY K
Sbjct: 98 KLKGEYNKAIAAYNK 112
>gi|115447831|ref|NP_001047695.1| Os02g0670400 [Oryza sativa Japonica Group]
gi|50251344|dbj|BAD28320.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|50252158|dbj|BAD28154.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|113537226|dbj|BAF09609.1| Os02g0670400 [Oryza sativa Japonica Group]
Length = 145
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 73/112 (65%), Gaps = 16/112 (14%)
Query: 33 AGKKKDSNA---PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
AGK+K + A PKRP SA+F+FM +FR+ ++ + PDNKSVAA+ KA G+KW++MSE EK
Sbjct: 21 AGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEK 80
Query: 90 APYVQKALNKKAEYEL---------ALEAYKKQLNDNGAGVSEDSWKSTSEV 132
APYV KA KK +YE + + K + +D+G G S KS SEV
Sbjct: 81 APYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDGEG----SDKSKSEV 128
>gi|302796105|ref|XP_002979815.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
gi|302807533|ref|XP_002985461.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300146924|gb|EFJ13591.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300152575|gb|EFJ19217.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
Length = 84
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP +A+F+F+E FR+ +KE PD K VAA+GKA G KW MSE+EKA YV KA
Sbjct: 8 KDPNLPKRPPTAFFVFLESFRQQYKEDHPDVKGVAAVGKAAGDKWSKMSESEKAVYVNKA 67
Query: 97 LNKKAEYELALEAYKKQ 113
+A+Y ++ AYKK+
Sbjct: 68 AQLRADYAESMAAYKKK 84
>gi|18419623|gb|AAL69379.1|AF462216_1 HMG-domain containing protein [Narcissus pseudonarcissus]
Length = 106
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 50/66 (75%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PKRP SA+F+FME+FRK FKE P+NK V+ +GKA G KWKSMS EKAPY KA
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 97 LNKKAE 102
+KAE
Sbjct: 101 AKRKAE 106
>gi|224097317|ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa]
gi|222853809|gb|EEE91356.1| high mobility group family [Populus trichocarpa]
Length = 201
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D NAPKRP +A+F+FM+DFRK +KE+ PD+K V + K GG +WKSM++ EK YV KA
Sbjct: 100 RDPNAPKRPPTAFFLFMDDFRKEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKA 159
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVS 122
KAE + ALE+ + N++ GVS
Sbjct: 160 AELKAENDKALESDNAE-NEDDEGVS 184
>gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKR SA+F+FM +FR+ FK+ P NKSVAA+GKA G++WKS+SE+EKAP+V KA
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKAN 97
Query: 98 NKKAEYELALEAYKK 112
K EY A+ +Y K
Sbjct: 98 KLKGEYNKAIASYNK 112
>gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa Japonica Group]
gi|125540625|gb|EAY87020.1| hypothetical protein OsI_08417 [Oryza sativa Indica Group]
Length = 145
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 16/112 (14%)
Query: 33 AGKKKDSNA---PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
AGK+K + A PKRP SA+F+FM +FR+ ++ + P NKSVAA+ KA G+KW++MSE EK
Sbjct: 21 AGKRKKAAASGKPKRPPSAFFVFMSEFRQEYQAAHPGNKSVAAVSKAAGEKWRAMSEQEK 80
Query: 90 APYVQKALNKKAEYEL---------ALEAYKKQLNDNGAGVSEDSWKSTSEV 132
APYV KA KK +YE + + K + +D+G G S KS SEV
Sbjct: 81 APYVDKAGQKKQDYEKTKANFDKKESTSSKKAKTHDDGEG----SDKSKSEV 128
>gi|194700664|gb|ACF84416.1| unknown [Zea mays]
gi|194701704|gb|ACF84936.1| unknown [Zea mays]
gi|413923412|gb|AFW63344.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
gi|413923413|gb|AFW63345.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 139
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 66/109 (60%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
S PKRP SA+F+FM +FR+ ++ P NKSVAA+ KA G+KW+SMSE EK PYV +A
Sbjct: 31 SGKPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQ 90
Query: 99 KKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
KK +YE +K+ + ++D S SEV S E ND+ E
Sbjct: 91 KKQDYEKTKANIEKESTSSKKAKTDDDDGSKSEVDDEDGGSDEDNDDDE 139
>gi|195619220|gb|ACG31440.1| HMG1/2-like protein [Zea mays]
Length = 139
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
S PKRP SA+F+FM +FR+ ++ P NKSVA + KA G+KW++MS+ EK PYV +A
Sbjct: 30 SGKPKRPPSAFFVFMSEFRQQYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 99 KKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
KK +YE + KK+ + +ED S SEV SS E ND+ E
Sbjct: 90 KKQDYEKTKANFDKKESTSSKKAKTEDEDGSKSEVDDEDGSSDEENDDDE 139
>gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays]
gi|5441504|emb|CAB46753.1| HMGc1 protein [Zea mays]
gi|194690322|gb|ACF79245.1| unknown [Zea mays]
gi|194704052|gb|ACF86110.1| unknown [Zea mays]
gi|219885481|gb|ACL53115.1| unknown [Zea mays]
gi|413938184|gb|AFW72735.1| HMG-like nucleosome/chromatin assembly factor D isoform 1 [Zea
mays]
gi|413938185|gb|AFW72736.1| HMG-like nucleosome/chromatin assembly factor D isoform 2 [Zea
mays]
Length = 139
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
S PKRP SA+F+FM +FR+ ++ P NKSVA + KA G+KW++MS+ EK PYV +A
Sbjct: 30 SGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 99 KKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
KK +YE + KK+ + +ED S SEV SS E ND+ E
Sbjct: 90 KKQDYEKTKANFDKKESTSSKKAKTEDEDGSKSEVDDEDGSSDEENDDDE 139
>gi|162460809|ref|NP_001105483.1| high mobility group protein3 [Zea mays]
gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays]
gi|223947405|gb|ACN27786.1| unknown [Zea mays]
gi|413923414|gb|AFW63346.1| HMGc2 protein [Zea mays]
Length = 138
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
S PKRP SA+F+FM +FR+ ++ P NKSVAA+ KA G+KW+SMSE EK PYV +A
Sbjct: 31 SGKPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQ 90
Query: 99 KKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
KK +YE +K + A +D S SEV S E ND+ E
Sbjct: 91 KKQDYEKTKANIEKSTSSKKAKTDDDDG-SKSEVDDEDGGSDEDNDDDE 138
>gi|357508231|ref|XP_003624404.1| High mobility group protein [Medicago truncatula]
gi|355499419|gb|AES80622.1| High mobility group protein [Medicago truncatula]
Length = 144
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
K D + PKRP S +F+FM DFR F++ PDNK V+ +GKA G+KW+SMS+ +KAPYV
Sbjct: 7 KSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSD-DKAPYVAD 65
Query: 96 ALNKKAEYELALEAYKKQL 114
A KK EY A+ AY K++
Sbjct: 66 AEKKKMEYVKAIHAYNKKV 84
>gi|195618458|gb|ACG31059.1| HMG1/2-like protein [Zea mays]
gi|195640852|gb|ACG39894.1| HMG1/2-like protein [Zea mays]
gi|223975443|gb|ACN31909.1| unknown [Zea mays]
gi|413925109|gb|AFW65041.1| HMG type nucleosome/chromatin assembly factor DNucleasome/chromatin
assembly factor D protein NFD106 [Zea mays]
Length = 212
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKS 83
A+ K K G KD+ + P +A+F+FM+DFRK FK + PDNKSVA + K GG++WKS
Sbjct: 75 ADRKKSSAKGGGNKDAKRKRSP-TAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKS 133
Query: 84 MSEAEKAPYVQKALNKKAEYE 104
M++ EK PY++KA KAE E
Sbjct: 134 MTDEEKKPYIEKAAELKAEAE 154
>gi|162461550|ref|NP_001105075.1| high mobility group box protein2 [Zea mays]
gi|17017394|gb|AAL33651.1|AF440222_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 139
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
S PKRP SA+F FM +FR+ ++ P NKSVA + KA G+KW++MS+ EK PYV +A
Sbjct: 30 SGKPKRPPSAFFAFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 99 KKAEYELALEAY-KKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
KK +YE + KK+ + +ED S SEV SS E ND+ E
Sbjct: 90 KKQDYEKTKANFDKKESTSSKKAKTEDEDGSKSEVDDEDGSSDEENDDDE 139
>gi|346472777|gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+N PKR +A+F+FM+DFRK +KE PDNKSVA++ K GG++W+SM+ EK PY +A
Sbjct: 101 TNKPKRAPTAFFLFMDDFRKEYKELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAE 160
Query: 99 KKAEYELALE 108
KAEY +E
Sbjct: 161 LKAEYVKEIE 170
>gi|162462896|ref|NP_001105076.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|17017396|gb|AAL33652.1|AF440223_1 HMG type nucleosome/chromatin assembly factor D [Zea mays]
gi|22135475|gb|AAM93218.1|AF527617_1 nucleasome/chromatin assembly factor D protein NFD106 [Zea mays]
Length = 154
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKS 83
A+ K K G KD+ + P +A+F+FM+DFRK FK + PDNKSVA + K GG++WKS
Sbjct: 17 ADRKKSSAKGGGNKDAKRKRSP-TAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKS 75
Query: 84 MSEAEKAPYVQKALNKKAEYE 104
M++ EK PY++KA KAE E
Sbjct: 76 MTDEEKKPYIEKAAELKAEAE 96
>gi|449433698|ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
Length = 161
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PK+P +A+F F++DFRK F+E PD K++ +GKA G+KWK+M+ EK Y A
Sbjct: 69 DVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYYDIAT 128
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSW 126
K+AE++ A+ YKK++ SE+ W
Sbjct: 129 EKRAEFDKAMTEYKKRMESGIDQESEEDW 157
>gi|125559825|gb|EAZ05273.1| hypothetical protein OsI_27476 [Oryza sativa Indica Group]
gi|125559834|gb|EAZ05282.1| hypothetical protein OsI_27485 [Oryza sativa Indica Group]
Length = 204
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 43 KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAE 102
KRP +A+F+FM DFRK +K PDNKSV+A+ K GG++WKSMS+ +K PY+ KA KAE
Sbjct: 93 KRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELKAE 152
Query: 103 Y 103
Y
Sbjct: 153 Y 153
>gi|115474323|ref|NP_001060758.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|38637289|dbj|BAD03552.1| putative HMG type nucleosome/chromatin assembly factor D [Oryza
sativa Japonica Group]
gi|113622727|dbj|BAF22672.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|125601889|gb|EAZ41214.1| hypothetical protein OsJ_25719 [Oryza sativa Japonica Group]
gi|213959174|gb|ACJ54921.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215697671|dbj|BAG91665.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 43 KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAE 102
KRP +A+F+FM DFRK +K PDNKSV+A+ K GG++WKSMS+ +K PY+ KA KAE
Sbjct: 93 KRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELKAE 152
Query: 103 Y 103
Y
Sbjct: 153 Y 153
>gi|242080163|ref|XP_002444850.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
gi|241941200|gb|EES14345.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
Length = 221
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%)
Query: 43 KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAE 102
KR +A+F+FM+DFRK FK + PDNKSVA + K GG+KWKSM++ EK PYV+KA KA+
Sbjct: 98 KRSPTAFFLFMDDFRKEFKAAHPDNKSVATVAKEGGEKWKSMTDEEKKPYVEKAAELKAQ 157
Query: 103 YE 104
E
Sbjct: 158 AE 159
>gi|297798364|ref|XP_002867066.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312902|gb|EFH43325.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 125
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 49 YFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALE 108
+F+F++DFR+ F + PDNKSVA++GKA G+KWKSM+E +KAP+V KA +KK EY ++
Sbjct: 41 FFVFLDDFRREFNLANPDNKSVASVGKAAGKKWKSMTEEDKAPFVAKAKSKKTEYAATMQ 100
Query: 109 AYKKQLNDNGAGVSEDSWK 127
Y +L NG + D K
Sbjct: 101 QYNMELA-NGTKTAGDDEK 118
>gi|388495062|gb|AFK35597.1| unknown [Lotus japonicus]
Length = 162
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 23 KAENKPK-KEKAGKKK-DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
K+ KPK K+K K++ D+N PK+P +A+F F+EDFRK F+ PD K++ +GK+ G+K
Sbjct: 49 KSTKKPKAKQKTSKQRIDANKPKKPPTAFFYFLEDFRKEFQVQNPDVKTMRDIGKSCGEK 108
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
WK+M+ EK Y A K+AE++ A+ Y K++ N
Sbjct: 109 WKTMTYEEKVQYYDIATEKRAEFDRAMTEYNKKMVSN 145
>gi|357136925|ref|XP_003570053.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 144
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 8/103 (7%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
RP SA+F+FM +FR+ ++ P+NKSVA + KA G+KW+SMS+A+KAPYV+KA KK +Y
Sbjct: 36 RPPSAFFVFMSEFRQEYQAEHPNNKSVANVSKAAGEKWRSMSDADKAPYVEKAGQKKQDY 95
Query: 104 ELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKS-SSSEINDE 145
E + K+ S S K+ ++ G S SE++DE
Sbjct: 96 EKTKATFDKKE-------STSSKKTKTQDDEGSDKSKSEVDDE 131
>gi|339716048|gb|AEJ88271.1| putative HMG DNA-binding protein [Wolffia arrhiza]
Length = 148
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKR SA+F+F+E+FRK +KE PDNKSVAA+GKA G KW+SMS+++KAPYV K+
Sbjct: 37 DPNKPKRAPSAFFVFLEEFRKEYKEKHPDNKSVAAVGKAAGAKWRSMSDSDKAPYVNKSN 96
Query: 98 NKKAEYE-LALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+KAE + A KKQ + A +DS KS SEV
Sbjct: 97 KRKAEVQKTAAVNAKKQETSSRAAADDDSDKSKSEV 132
>gi|225463454|ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
K K +K ++ DS PK+P +A+F F+EDFRK F+E PD KS+ +GKA G+KWK+M+
Sbjct: 73 KAKTKKRSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTY 132
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDS 125
EK Y A K+AE++ A+ Y K+ EDS
Sbjct: 133 EEKVQYYDIATEKRAEFDRAMADYIKRQESGEDEEIEDS 171
>gi|326525246|dbj|BAK07893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 16/111 (14%)
Query: 43 KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAE 102
KRP +A+F+FM+DFR FK S PD K VAA+GKA G+KW+SM+E EK PY +A KA+
Sbjct: 102 KRPPTAFFLFMKDFRVEFKTSHPDEKGVAAVGKAAGEKWRSMTEEEKKPYNDQAKELKAQ 161
Query: 103 YELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQ 153
DNG G +E+ + + + + + E++D A+ E Q
Sbjct: 162 L------------DNGEGSAEN---NVGDEEKADADAEEVDD-ADLEVDKQ 196
>gi|388511193|gb|AFK43658.1| unknown [Lotus japonicus]
Length = 92
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 53 MEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
M +FR FK+ P+NKSVAA+GKA G KWKSM++AEKAPYV +A K EYE L AY
Sbjct: 1 MSEFRTQFKKDNPNNKSVAAVGKAAGSKWKSMTDAEKAPYVARAEKAKEEYEKTLRAYNN 60
Query: 113 QLNDN-GAGVSEDSWKSTSEV 132
L ++ G+ E S KS SEV
Sbjct: 61 GLAESKGSAEEEGSDKSKSEV 81
>gi|357144307|ref|XP_003573245.1| PREDICTED: high mobility group B protein 7-like [Brachypodium
distachyon]
Length = 218
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
N KRP +A+FIFM+DFR FK S PD K V+A+GKA G KWK+M++ EK PY+ +A
Sbjct: 99 NGKKRPPTAFFIFMKDFRLEFKASHPDEKGVSAVGKAAGVKWKAMTDEEKKPYLDQAKEL 158
Query: 100 KAEYE 104
KA+++
Sbjct: 159 KAKFD 163
>gi|449521910|ref|XP_004167972.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 112
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
++KA K +P K+ KKD N PKRP SA+F+F+E+FRK +K P+ K+V+A+GKAG
Sbjct: 31 VVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRENPNVKAVSAVGKAG 90
Query: 78 GQKWKSMSEA 87
G+KWKS+S A
Sbjct: 91 GEKWKSLSHA 100
>gi|388501678|gb|AFK38905.1| unknown [Medicago truncatula]
Length = 152
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
D+ KA + +NK +K D+ PK+P +A+F F+EDFRK FK+ PD KS+ +GKA
Sbjct: 46 DITKAVQKKNK-------QKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKA 98
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
G+KWK+M+ EK Y A K+AE++ A Y K++
Sbjct: 99 CGEKWKTMTFEEKVQYYDIATEKRAEFDRATTEYNKKM 136
>gi|297812491|ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
gi|297319966|gb|EFH50388.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA-MGKAGGQKWKSMSEAEKAPYVQKAL 97
SN PKRPL+A+FIFM DFRK+FK N S+A K GG+KWKS++E EK Y+ KA
Sbjct: 112 SNKPKRPLTAFFIFMNDFRKTFKTEH--NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAA 169
Query: 98 NKKAEYELALEA 109
KAEY +LE+
Sbjct: 170 ELKAEYNKSLES 181
>gi|413935044|gb|AFW69595.1| high mobility group protein1 [Zea mays]
Length = 97
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKS 59
MKG + A K A + K KP K + GK KD N PKR SA+F+FME+FRK
Sbjct: 1 MKGAKSKGAA--KADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 58
Query: 60 FKESFPDNKSVAAMGKAGGQKWKSMSEA 87
FKE P NKSVAA+GKA G +WKS+SE+
Sbjct: 59 FKEKNPKNKSVAAVGKAAGDRWKSLSES 86
>gi|226503761|ref|NP_001151622.1| HMG1/2-like protein [Zea mays]
gi|195648164|gb|ACG43550.1| HMG1/2-like protein [Zea mays]
gi|414881086|tpg|DAA58217.1| TPA: HMG1/2-like protein [Zea mays]
Length = 115
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKS 83
+ KP+ + AGK D APK+P +A+F FMEDFRK +K+ P KS+ +GKA G+KW +
Sbjct: 24 TKRKPRPKPAGKG-DPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEIGKACGEKWNT 82
Query: 84 MSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
M+ EK Y A K+AE+E A+ Y K+
Sbjct: 83 MTFEEKVKYYDIATEKRAEFEKAMIEYNKK 112
>gi|357484153|ref|XP_003612363.1| HMG1/2-like protein [Medicago truncatula]
gi|355513698|gb|AES95321.1| HMG1/2-like protein [Medicago truncatula]
Length = 94
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 8 AVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
AV+ KP + LK + A K+ K K KD N PKRP SA+F+FM +FR+ FK+ P N
Sbjct: 4 AVSDAKPADNRLKRKGAGTGTKQSK--KAKDPNKPKRPPSAFFVFMSEFRERFKKENPSN 61
Query: 68 KSVAAMGKAGGQKWKSMSEA 87
KSVA +GKAGG++WK++S+A
Sbjct: 62 KSVAVVGKAGGKEWKALSDA 81
>gi|255544145|ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223548146|gb|EEF49638.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 196
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 47 SAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELA 106
+A+FIF+++FRK+FKE+ PD+K V + K G+KWK+M++ EK PY KA KAEY+ A
Sbjct: 105 TAFFIFLDEFRKTFKEANPDSKDVKRVAKEAGEKWKAMTDEEKKPYADKATELKAEYDKA 164
Query: 107 LEAYKKQLN--DNGAGVSEDSWKSTSEV 132
L N D G +D+ + EV
Sbjct: 165 LGEVNNAENKDDEGGSEKDDAEQEVQEV 192
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D+N PKRP +A+ +FM DFRK P+ VAA+ K GG++W+SMSE +K PYV++
Sbjct: 253 RDANKPKRPGTAFMLFMGDFRKEMAGKEPEG-GVAALAKLGGERWRSMSEEDKRPYVERQ 311
Query: 97 LNKKAEYELALEAYKK 112
+K +YE +E Y++
Sbjct: 312 NEEKMKYEQNMEEYRR 327
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KPK K G APKR +AY F + +R+ K+S + GK KW +MS+
Sbjct: 170 KPKVNKDGVP----APKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSD 225
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
+K P++ A + Y+ + YK + N
Sbjct: 226 EDKQPFLSAAARDRERYKREMAVYKPARDAN 256
>gi|255557355|ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 198
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
DS PK+P +A+F F+EDFRK F++ PD KS+ +GKA G+KWK M+ EK Y A
Sbjct: 106 DSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKMMTYEEKVKYYDIAT 165
Query: 98 NKKAEYELALEAY-KKQLNDNGAGVSEDS 125
K+AE++ A+ Y KK+ + V +DS
Sbjct: 166 EKRAEFDKAMAEYIKKKESGEFEEVEDDS 194
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D+N PKRP +A+ +FM DFRK P+ VAA+ K GG++W+SMSE +K PYV++
Sbjct: 289 RDANKPKRPGTAFMLFMGDFRKEMAGKEPEG-GVAALAKLGGERWRSMSEEDKRPYVERQ 347
Query: 97 LNKKAEYELALEAYKK 112
+K +YE +E Y++
Sbjct: 348 NEEKMKYEQNMEEYRR 363
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KPK K G APKR +AY F + +R+ K+S + GK KW +MS+
Sbjct: 206 KPKVNKDGVP----APKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSD 261
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
+K P++ A + Y+ + YK + N
Sbjct: 262 EDKQPFLSAAARDRERYKREMAVYKPARDAN 292
>gi|18420676|ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis thaliana]
gi|75245985|sp|Q8LDF9.1|HMGB7_ARATH RecName: Full=High mobility group B protein 7; AltName:
Full=Nucleosome/chromatin assembly factor group D 07;
Short=Nucleosome/chromatin assembly factor group D 7
gi|21554154|gb|AAM63233.1| unknown [Arabidopsis thaliana]
gi|26452394|dbj|BAC43282.1| unknown protein [Arabidopsis thaliana]
gi|332005781|gb|AED93164.1| high-mobility group B6 protein [Arabidopsis thaliana]
Length = 241
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA-MGKAGGQKWKSMSEAEKAPYVQKAL 97
SN PKRPL+A+FIFM DFRK+FK N S+A K GG+KWKS++E EK Y+ KA
Sbjct: 112 SNKPKRPLTAFFIFMSDFRKTFKSEH--NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAA 169
Query: 98 NKKAEYELAL 107
KAEY +L
Sbjct: 170 ELKAEYNKSL 179
>gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis thaliana]
Length = 226
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA-MGKAGGQKWKSMSEAEKAPYVQKAL 97
SN PKRPL+A+FIFM DFRK+FK N S+A K GG+KWKS++E EK Y+ KA
Sbjct: 97 SNKPKRPLTAFFIFMSDFRKTFKSEH--NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAA 154
Query: 98 NKKAEYELAL 107
KAEY +L
Sbjct: 155 ELKAEYNKSL 164
>gi|427793707|gb|JAA62305.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 529
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D+N PKRP +A+ +FM DFRK P+ VAA+ K GG++W+SMSE +K PYV++
Sbjct: 274 RDANKPKRPGTAFMLFMGDFRKEMAGKEPEG-GVAALAKLGGERWRSMSEEDKRPYVERQ 332
Query: 97 LNKKAEYELALEAYKK 112
+K +YE +E Y++
Sbjct: 333 NEEKMKYEQNMEEYRR 348
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KPK K G APKR +AY F + +R+ K+S + GK KW +MS+
Sbjct: 191 KPKVNKDGVP----APKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSD 246
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
+K P++ A + Y+ + YK + N
Sbjct: 247 EDKQPFLSAAARDRERYKREMAVYKPARDAN 277
>gi|427780835|gb|JAA55869.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 508
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D+N PKRP +A+ +FM DFRK P+ VAA+ K GG++W+SMSE +K PYV++
Sbjct: 253 RDANKPKRPGTAFMLFMGDFRKEMAGKEPEG-GVAALAKLGGERWRSMSEEDKRPYVERQ 311
Query: 97 LNKKAEYELALEAYKK 112
+K +YE +E Y++
Sbjct: 312 NEEKMKYEQNMEEYRR 327
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KPK K G APKR +AY F + +R+ K+S + GK KW +MS+
Sbjct: 170 KPKVNKDGVP----APKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSD 225
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
+K P++ A + Y+ + YK + N
Sbjct: 226 EDKQPFLSAAARDRERYKREMAVYKPARDAN 256
>gi|356524949|ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 148
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D+ PK+P +A+F F+EDFRK F+E PD KS+ +GKA G+KWK+M+ EK Y A
Sbjct: 56 DAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 115
Query: 98 NKKAEYELALEAYKKQLNDNG 118
K+ E++ A+ + K++ +NG
Sbjct: 116 KKREEFDNAMAEFNKKM-ENG 135
>gi|293333310|ref|NP_001168929.1| uncharacterized protein LOC100382741 [Zea mays]
gi|223973791|gb|ACN31083.1| unknown [Zea mays]
Length = 204
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
S PKRP SA+F+FM +FR+ ++ P NKSVA + KA G+KW++MS+ EK PYV +A
Sbjct: 30 SGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQ 89
Query: 99 KK 100
KK
Sbjct: 90 KK 91
>gi|297736623|emb|CBI25494.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 43/50 (86%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
D N PKRP SA+F+F+E+FRK +K+ P+ K+V+A+GKAGG+KWKS+SEA
Sbjct: 76 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEA 125
>gi|297597325|ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group]
gi|56202161|dbj|BAD73639.1| HMG protein-like [Oryza sativa Japonica Group]
gi|125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sativa Indica Group]
gi|215693961|dbj|BAG89148.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673529|dbj|BAF05713.2| Os01g0666200 [Oryza sativa Japonica Group]
Length = 133
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK+P +A+F FMEDFRK++KE P KS+ +GKA G+KW +M+ E+ Y A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 98 NKKAEYELALEAYKKQ 113
K+AEYE A+ + K+
Sbjct: 105 EKRAEYEKAVAEFDKK 120
>gi|351724833|ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
gi|255626057|gb|ACU13373.1| unknown [Glycine max]
Length = 150
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D+ P++P +A+F F+EDFRK F+E PD +S+ +GKA G+KWK+M+ EK Y A
Sbjct: 58 DAMKPRKPPTAFFYFLEDFRKEFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYYDIAT 117
Query: 98 NKKAEYELALEAYKKQLNDNG 118
K+ E++ A+ + K++ +NG
Sbjct: 118 KKREEFDSAMAEFNKKM-ENG 137
>gi|242053921|ref|XP_002456106.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
gi|241928081|gb|EES01226.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
Length = 109
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKW 81
RK+ KP AGK D APK+P +A+F FMEDFRK +K+ P KS+ +GKA G+KW
Sbjct: 10 RKSRPKP----AGKG-DRRAPKKPPTAFFYFMEDFRKVYKQEKPSVKSMQEIGKACGEKW 64
Query: 82 KSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDS 125
+M+ EK Y A K+AE+E A+ Y K+ NG +SE+S
Sbjct: 65 NTMAFEEKVKYYDIATEKRAEFEKAMIEYNKK-KKNGE-MSEES 106
>gi|18403553|ref|NP_565788.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|75219838|sp|O64702.2|HMG14_ARATH RecName: Full=High mobility group B protein 14; AltName:
Full=Nucleosome/chromatin assembly factor group D 14
gi|20197083|gb|AAC26692.2| putative HMG protein [Arabidopsis thaliana]
gi|20197160|gb|AAM14948.1| putative HMG protein [Arabidopsis thaliana]
gi|21536857|gb|AAM61189.1| putative HMG protein [Arabidopsis thaliana]
gi|26452914|dbj|BAC43535.1| putative HMG protein [Arabidopsis thaliana]
gi|28973511|gb|AAO64080.1| putative HMG protein [Arabidopsis thaliana]
gi|330253881|gb|AEC08975.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 151
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+ PK+P +A+F F++DFRK ++E PD KS+ +GK G+KWK+M+ EK Y A
Sbjct: 60 TKMPKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATE 119
Query: 99 KKAEYELALEAYKKQLNDNGAGVSE 123
K+ E+ A+ Y K++ SE
Sbjct: 120 KREEFHRAMTEYTKRMESGAHDESE 144
>gi|299748049|ref|XP_001837422.2| hypothetical protein CC1G_01334 [Coprinopsis cinerea okayama7#130]
gi|298407795|gb|EAU84338.2| hypothetical protein CC1G_01334 [Coprinopsis cinerea okayama7#130]
Length = 558
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR---KSFKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R K KE F D
Sbjct: 421 RAAQRKAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRADPKLVKEIFGDETETTKQSVLAA 480
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++AE+ P++ +A +K EYE A Y++ G +
Sbjct: 481 AKWRSMTDAERQPFLAQAEQEKMEYEAARRLYEEGTTGYGTNI 523
>gi|356510782|ref|XP_003524113.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 165
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%)
Query: 26 NKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
N KK KA +K D+ K+PLS +F F+EDFRK F+ PD KS +GKA +KWK+M+
Sbjct: 51 NSRKKLKAKQKFDAMKQKKPLSGFFYFLEDFRKEFQVRNPDVKSKRDIGKASAKKWKTMT 110
Query: 86 EAEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
EKA Y A K E++ A+ + K++ N
Sbjct: 111 YEEKAQYFDIATKKHDEFDSAMAEFNKKMISN 142
>gi|183014156|dbj|BAG24407.1| hypothetical protein [Coprinopsis cinerea]
Length = 558
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR---KSFKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R K KE F D
Sbjct: 421 RAAQRKAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRADPKLVKEIFGDETETTKQSVLAA 480
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++AE+ P++ +A +K EYE A Y++ G +
Sbjct: 481 AKWRSMTDAERQPFLAQAEQEKMEYEAARRLYEEGTTGYGTNI 523
>gi|125527178|gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indica Group]
Length = 133
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK+P +A+F FMEDFRK++KE P KS+ +GKA G+KW +M+ E+ Y A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 98 NKKAEYELALEAYKKQ 113
K+AEYE + + K+
Sbjct: 105 EKRAEYEKPVAEFDKK 120
>gi|357135842|ref|XP_003569517.1| PREDICTED: high mobility group B protein 14-like [Brachypodium
distachyon]
Length = 127
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 3 GPRVVAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKE 62
GP+ + + P A + + + +P+ K G D PK+P +A+F FMEDFR FK
Sbjct: 8 GPKPLNTVRLPPVA----SPRTKPRPEPRKKGTVGDPRRPKKPPTAFFYFMEDFRDKFKA 63
Query: 63 SFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
P KS+ +G+A G+KW M+ EK Y A ++AE+E A+ Y K+
Sbjct: 64 ENPSVKSMQDIGRACGEKWNKMAFEEKVKYYDLATERRAEFEKAMAQYNKK 114
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 14/123 (11%)
Query: 5 RVVAVAQKKPHADMLKARKAENK---------PKKEKAG----KKKDSNAPKRPLSAYFI 51
R + QKKP+ DM + + K P E+ G KKKD NAPK+P SAYF+
Sbjct: 88 RQLTDEQKKPYNDMARTDRERYKEAMKNYVPTPGFEEGGRRRKKKKDPNAPKKPKSAYFV 147
Query: 52 FMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
F E R + + +P+++ V+ K G++W+ M+E +K P+ KA K EY+ A+ YK
Sbjct: 148 FAETRRDALRAQYPEDR-VSDTAKRTGEEWRGMTEEQKRPFQLKAQELKQEYDQAVAEYK 206
Query: 112 KQL 114
L
Sbjct: 207 ASL 209
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N P+ L+ Y F ++ R + + P N SV + K G +W+ +++ +K PY A
Sbjct: 45 DPNKPRGALTPYMCFNKEVRPAIMQQHP-NASVTEVAKLIGAQWRQLTDEQKKPYNDMAR 103
Query: 98 NKKAEYELALEAY 110
+ Y+ A++ Y
Sbjct: 104 TDRERYKEAMKNY 116
>gi|359481661|ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
gi|147815135|emb|CAN74566.1| hypothetical protein VITISV_023651 [Vitis vinifera]
gi|297740214|emb|CBI30396.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
RP SA+F+F+E+FRK FK+ P+ K+V+A+GKAGG++WKS+SEAEKAPY KA KKAEY
Sbjct: 58 RPPSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEY 117
Query: 104 ELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
E + AY K+ E+S +S SEV
Sbjct: 118 EKIMNAYNKKQESTADDGDEESDRSKSEV 146
>gi|297826905|ref|XP_002881335.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327174|gb|EFH57594.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKAL 97
S PK+P +A+F F+EDFRK ++E P+ KS+ +GK G+KWK+M+ EK Y A
Sbjct: 61 SKMPKKPPTAFFFFLEDFRKQYQEENPEVKSMREVIGKTCGEKWKTMTYEEKVKYYDIAT 120
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSE 123
K+ E+ A+ Y K++ G SE
Sbjct: 121 EKREEFHRAMTEYTKRMESGGYDESE 146
>gi|443724197|gb|ELU12309.1| hypothetical protein CAPTEDRAFT_56147, partial [Capitella teleta]
Length = 196
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K +D N PKRP SAYF+++ FR K+ P NK + +A G+ WK ++E EKAPY Q
Sbjct: 92 KGRDKNRPKRPQSAYFLWLAGFRTRMKDKIPVNKELL---RAAGEHWKRLTEVEKAPYEQ 148
Query: 95 KALNKKAEYELALEAYKKQLNDNGA 119
A ++ +YE A+ Y + NG
Sbjct: 149 MAEGERRKYEEAMRQYNMPPSRNGG 173
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD N PKRP SAYF ++ R ++ VA K Q W+ M+ ++ +
Sbjct: 16 KNKDPNRPKRPTSAYFFYVAHCRAECEKRGERITRVAQWTKEISQVWREMTPEDRKGFDA 75
Query: 95 KALNKKAEYELALEAYK 111
KA+ KA YE + YK
Sbjct: 76 KAVVDKARYEEQMNRYK 92
>gi|297812105|ref|XP_002873936.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
gi|297319773|gb|EFH50195.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA-MGKAGGQKWKSMSEAEKAPYVQKAL 97
SN PKRPL+A+FIFM DFRK+FK N S A K GG+KW S++E EK Y+ KA
Sbjct: 109 SNKPKRPLTAFFIFMNDFRKTFKTEH--NGSFAKDAAKIGGEKWMSLTEDEKKVYLDKAA 166
Query: 98 NKKAEY 103
KAEY
Sbjct: 167 ELKAEY 172
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 7/106 (6%)
Query: 11 QKKPHADMLKARKAENKPKKEKAGKKK--DSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
+K+P ++ +R+ + +K+KA +KK D N PKRP SAYF+F+ DFRK++ K
Sbjct: 236 EKEPFLEL--SRRDRERWQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYPGKSDPAK 293
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
+ K G+ W S+S+AEK PY + A +A++E LEAYK+ +
Sbjct: 294 EIT---KKAGEAWNSLSDAEKTPYYRSAQLVRAKWEQDLEAYKQSV 336
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP +K K+K KRP +AY F+ +R++ KE+ + +A +KW++M+E
Sbjct: 177 KPTDKK--KRKRHTWVKRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNE 234
Query: 87 AEKAPYVQ 94
EK P+++
Sbjct: 235 EEKEPFLE 242
>gi|168056739|ref|XP_001780376.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668218|gb|EDQ54830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S + +FME FRK++K++ P++K VAA KAGG+KWK M+E E+APY + A
Sbjct: 107 DPNAPKRPASGFLVFMESFRKTYKDANPESKGVAAAAKAGGEKWKQMTEEERAPYNKDAE 166
Query: 98 NKKAEYELALEAYKKQLNDNGAG 120
+K YE A+ YK + N G
Sbjct: 167 ARKLNYEQAMTNYKNKGPKNDEG 189
>gi|79324303|ref|NP_001031480.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|330253882|gb|AEC08976.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 152
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKAL 97
+ PK+P +A+F F++DFRK ++E PD KS+ +GK G+KWK+M+ EK Y A
Sbjct: 60 TKMPKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIAT 119
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSE 123
K+ E+ A+ Y K++ SE
Sbjct: 120 EKREEFHRAMTEYTKRMESGAHDESE 145
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 7/106 (6%)
Query: 11 QKKPHADMLKARKAENKPKKEKAGKKK--DSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
+K+P ++ +R+ + +K+KA +KK D N PKRP SAYF+F+ DFRK++ K
Sbjct: 99 EKEPFLEL--SRRDRERWQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYPGKSDPAK 156
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
+ K G+ W S+S+AEK PY + A +A++E LEAYK+ +
Sbjct: 157 EIT---KKAGEAWNSLSDAEKTPYYRSAQLVRAKWEQDLEAYKQSV 199
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+K KRP +AY F+ +R++ KE+ + +A +KW++M+E EK P+++
Sbjct: 46 KRKRHTWVKRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNEEEKEPFLE 105
>gi|224080027|ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa]
Length = 165
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 47 SAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELA 106
+A+F F+EDFRK F+E PD KS+ +GKA G+KWK+M+ EK Y A K+AE++ A
Sbjct: 82 TAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIATEKRAEFDRA 141
Query: 107 LEAYKKQ 113
Y K+
Sbjct: 142 TSEYIKR 148
>gi|342319487|gb|EGU11435.1| Non-histone chromosomal protein [Rhodotorula glutinis ATCC 204091]
Length = 142
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 25 ENKPKKEKAGK----KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD------NKSVAAMG 74
E+KP+ KA KKD NAPKRPLSAY F +D R KE PD +S+ +G
Sbjct: 4 ESKPRATKAATGGRAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIG 63
Query: 75 KAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
K G KWK + E E+ PY +KA K+ YE AY
Sbjct: 64 KILGAKWKELPEDERKPYEEKASADKSRYEKEKAAY 99
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY IF + R + +E P N + +GK G++WK++S+ ++ PY +
Sbjct: 17 KKKDPNAPKRGLSAYMIFANEQRAAVREENP-NITFGQVGKVLGERWKALSDKQRVPYEE 75
Query: 95 KALNKKAEYELALEAYKKQLN 115
KA K YE AY +N
Sbjct: 76 KAATDKQRYEDEKAAYNTNIN 96
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS-VAAMGKAGGQKWKSMSEA 87
KK KA KKD NAPKRPLSA+ F +D R+ P+ KS +A +GK G+ W +S+A
Sbjct: 217 KKTKA--KKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDA 274
Query: 88 EKAPYVQKALNKKAEYELALEAYKK 112
+K PY KA+ KA YE + AYKK
Sbjct: 275 QKKPYESKAVADKARYEREMIAYKK 299
>gi|395329999|gb|EJF62384.1| hypothetical protein DICSQDRAFT_161203 [Dichomitus squalens
LYAD-421 SS1]
Length = 662
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R KE F D
Sbjct: 507 RTAQRKAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRSDPELVKEVFGDETETTKQSVLAA 566
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++ E+ P++ +A +K EYE A + Y++ G +
Sbjct: 567 GKWRSMTDEERKPFLAQAEQEKLEYESARKMYEEGTTGYGNSI 609
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K + K K+ KKKD NAPKR LSAY IF + R + +E P N + +GK
Sbjct: 1 MPKEKTTARKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENP-NITFGQVGKVL 59
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
G++WK++S+ ++ PY +KA K YE AY + +D+
Sbjct: 60 GERWKALSDKQRVPYEEKAATDKQRYEDEKAAYNSRQDDD 99
>gi|393246429|gb|EJD53938.1| hypothetical protein AURDEDRAFT_110629 [Auricularia delicata
TFB-10046 SS5]
Length = 486
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R S +E F D
Sbjct: 346 RAAQRKAGKSRKGNLKDPNAPKKPLSAYFMFLQKIRSSPQLVQEVFGDETETTKQSVLAA 405
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSS 138
KW+S+S+AEK P++ +A K YE A Y+ + N ++S+ ++ G ++
Sbjct: 406 AKWRSLSDAEKKPFLVQAEQDKIAYENARRLYEDRHTGNII------YRSSGDLGHGSTT 459
Query: 139 S 139
S
Sbjct: 460 S 460
>gi|403419540|emb|CCM06240.1| predicted protein [Fibroporia radiculosa]
Length = 763
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ + K + G KD NAPK+PLSAYF+F++ R KE F D
Sbjct: 614 RTAQRRAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRSDPELVKEVFGDESETTKQSVLAA 673
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++ E+ P++ +A +K EYE A + Y++ G +
Sbjct: 674 GKWRSMTDEERKPFLAQAEQEKLEYESARKLYEEGTTGYGTSI 716
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS-VAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPKRPLSA+ F +D R+ P+ KS +A +GK G+ W +S+A+K PY
Sbjct: 14 KKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYES 73
Query: 95 KALNKKAEYELALEAYKK 112
KA+ KA YE + AYKK
Sbjct: 74 KAVADKARYEREMIAYKK 91
>gi|302684321|ref|XP_003031841.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
gi|300105534|gb|EFI96938.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
Length = 114
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
D RKA K +K KKD NAPKR LSAY F +D+R+ K PD S +GK
Sbjct: 6 DTKTRRKAATKSEKTPRKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDA-SFGELGKI 64
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSED 124
G KWK M E EK PYV KA K E AY ++ + + ED
Sbjct: 65 LGAKWKEMDEDEKKPYVAKAAKDKERAEADKAAYDEKKSAEASEADED 112
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F D R +E P K +GK G++WK++SE ++APY
Sbjct: 20 KKKDPNAPKRGLSAYMFFANDMRDKVREENPGIK-FGEVGKILGERWKALSEKQRAPYEA 78
Query: 95 KALNKKAEYELALEAYKKQLNDNGAGVSED 124
KA N K YE AY N G ED
Sbjct: 79 KAANDKKRYEDEKAAY------NAGGDDED 102
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 33 AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
GKKKD NA KRPLS +F+F +FR K + P S+ M K G+ W + S+ EK PY
Sbjct: 103 GGKKKDPNALKRPLSGFFLFCSEFRPKIKSTNP-GISIGDMAKKLGEMWINYSDREKQPY 161
Query: 93 VQKALNKKAEYELALEAYK-KQLNDNGAGVSEDSW 126
+ KA + K +YE + YK K D+ G ++ +W
Sbjct: 162 ITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAW 196
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKAARLKEKYEKDITAYR 162
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAYF FM D R ++ PD K V +GK G+ W++MS++EK PY +KA
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMK-VTEVGKKLGELWRAMSDSEKVPYNKKAD 78
Query: 98 NKKAEYELALEAYK 111
K YE A AYK
Sbjct: 79 ADKVRYEKAKAAYK 92
>gi|449549519|gb|EMD40484.1| hypothetical protein CERSUDRAFT_111079 [Ceriporiopsis subvermispora
B]
Length = 596
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ + K + G KD NAPK+PLSAYF+F++ R +E F D
Sbjct: 445 RTAQRRAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRSDPELVREVFGDETETTKQSVLAA 504
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++ E+ P++ +A +K EYE A + Y++ G+ +
Sbjct: 505 YKWRSMTDDERKPFLAQAEQEKLEYEAARKMYEEGTVGYGSSI 547
>gi|413923415|gb|AFW63347.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 95
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%)
Query: 53 MEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
M +FR+ ++ P NKSVAA+ KA G+KW+SMSE EK PYV +A KK +YE +K
Sbjct: 1 MSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKKQDYEKTKANIEK 60
Query: 113 QLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
+ + ++D S SEV S E ND+ E
Sbjct: 61 ESTSSKKAKTDDDDGSKSEVDDEDGGSDEDNDDDE 95
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 18 MLKARKAENKPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
+LK +K + P ++K+GKK KD NAPKRPLSAY + +D R KE PD S +GK
Sbjct: 22 VLKEKKEKASPVEKKSGKKEKDPNAPKRPLSAYMFYSQDKRTQVKEDNPDA-SFGELGKI 80
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G +WK + E+EK Y A K Y A AY
Sbjct: 81 LGAQWKDLDESEKKQYNDMATRDKERYTNAKAAY 114
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY IF + R + +E P N + +GK G++WK++S+ ++ PY +
Sbjct: 18 KKKDPNAPKRGLSAYMIFANEQRAAVREENP-NITFGQVGKVLGERWKALSDKQRVPYEE 76
Query: 95 KALNKKAEYELALEAYKKQLND 116
KA K YE AY + +D
Sbjct: 77 KAATDKQRYEDEKAAYNSRQDD 98
>gi|356528116|ref|XP_003532651.1| PREDICTED: high mobility group protein B2-like [Glycine max]
Length = 234
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 38 DSNAPKRPLSAYF----IFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYV 93
D+ PK+ SA+F +FMEDFRK F+E PD KS+ +GKA G+KWK+M+ EK Y
Sbjct: 41 DAMKPKKSPSAFFPLFSLFMEDFRKEFQEQNPDIKSMYDIGKACGEKWKTMTYEEKVKYY 100
Query: 94 QKALNKKAEYELALEAYKKQLN 115
A K+ E++ A+ + +++
Sbjct: 101 DIASEKRIEFDRAMAKFNNKMD 122
>gi|56756695|gb|AAW26520.1| SJCHGC07008 protein [Schistosoma japonicum]
Length = 213
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 13 KPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
+P D K+ K + K K K KD NAP RPLSAYF++ + R+ +S SVA
Sbjct: 104 RPRKDETKSSKRQTK----KQKKPKDPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAE 159
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDS 125
+ KAGG+ W++M K+ Y + K +Y+ L Y+ L+ +S DS
Sbjct: 160 VAKAGGELWRNMDSETKSTYQSRVDELKKKYQEDLRVYQSNLSSKERELSSDS 212
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKASRLKEKYEKDITAYR 162
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKASKLKEKYEKDITAYR 162
>gi|409079498|gb|EKM79859.1| hypothetical protein AGABI1DRAFT_57086 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 547
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR---KSFKESFPDNKSVAAMGKAGG 78
R A+ K K + KD NAPK+PLSAYF+F++ R K + F D
Sbjct: 408 RAAQRKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRANPKLVHDIFGDETETTKQSVLAA 467
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++AE+ P++ +A +K EYE A Y++ G +
Sbjct: 468 AKWRSMTDAERQPFLAQAEQEKMEYEAARRIYEEGAPAYGTSI 510
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 16 ADMLKARKAENKPKKEKAGK---KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
A + + R+ E P EK K PK SA+ ++ D+ + + S +VA
Sbjct: 295 ATLRRRRRPEESPTPEKGSDIPLKSVLKPPKLAPSAWQLYFTDWIQRQQASGTRKLNVAQ 354
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
K GQ++ S+S EK PY +++L K E L AY + L E+++++ ++
Sbjct: 355 AAKEAGQEYASLSPEEKEPYKRRSLAAKEARERELNAYMRTLTPEDIK-RENAYRA-AQR 412
Query: 133 QSGKSSSSEINDEAEQEFSSQVSSYFM 159
++GKS S I D + +S+YFM
Sbjct: 413 KAGKSRKSNIKDPNAPK--KPLSAYFM 437
>gi|426192550|gb|EKV42486.1| putative HMG1 protein [Agaricus bisporus var. bisporus H97]
Length = 547
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR---KSFKESFPDNKSVAAMGKAGG 78
R A+ K K + KD NAPK+PLSAYF+F++ R K + F D
Sbjct: 408 RAAQRKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRANPKLVHDIFGDETETTKQSVLAA 467
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++AE+ P++ +A +K EYE A Y++ G +
Sbjct: 468 AKWRSMTDAERQPFLAQAEQEKMEYEAARRIYEEGAPAYGTSI 510
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 16 ADMLKARKAENKPKKEKAGK---KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
A + + RK E P EK K PK SA+ ++ D+ + + S +VA
Sbjct: 295 ATLRRRRKPEESPTPEKGSDIPLKSVLKPPKLAPSAWQLYFTDWIQRQQASGTRKLNVAQ 354
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
K GQ++ S+S EK PY +++L K E L AY + L E+++++ ++
Sbjct: 355 AAKEAGQEYASLSPEEKEPYKRRSLAAKEARERELNAYMRTLTPEDIK-RENAYRA-AQR 412
Query: 133 QSGKSSSSEINDEAEQEFSSQVSSYFM 159
++GKS S I D + +S+YFM
Sbjct: 413 KAGKSRKSNIKDPNAPK--KPLSAYFM 437
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKASKLKEKYEKDITAYR 162
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+KD NAPKRP SA+F+F ++R S K+ FP S+ K G+ W +S++EK PY +
Sbjct: 93 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQFP-GLSIGDCAKKLGEMWSKLSQSEKQPYEE 151
Query: 95 KALNKKAEYELALEAYK 111
KA + +Y+ + AY+
Sbjct: 152 KAQKLREKYDRDMVAYR 168
>gi|226479042|emb|CAX73016.1| structure specific recognition protein 1 [Schistosoma japonicum]
Length = 679
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 13 KPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
+P D K+ K + K K K KD NAP RPLSAYF++ + R+ +S SVA
Sbjct: 570 RPRKDETKSSKRQTK----KQEKPKDPNAPTRPLSAYFLWFNENREKIAKSLSGQNSVAE 625
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDS 125
+ KAGG+ W++M K+ Y + K +Y+ L Y+ L+ +S DS
Sbjct: 626 VAKAGGELWRNMDSETKSTYQSRVDELKKKYQEDLRVYQSNLSSKERELSSDS 678
>gi|392568491|gb|EIW61665.1| hypothetical protein TRAVEDRAFT_115835 [Trametes versicolor
FP-101664 SS1]
Length = 585
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R +E F D
Sbjct: 430 RTAQRKAGKSRKGNLKDPNAPKKPLSAYFMFLQRIRSDPELVQEVFGDETETTKQSVLAA 489
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++ ++ P++ +A +K EYE A + Y+ G +
Sbjct: 490 GKWRSMTDEQRKPFLAQAEQEKLEYESARKMYEDGTTGYGTSI 532
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+ E K PK SA+ ++ D+ + + S +VA K GQ++ +S+ E
Sbjct: 333 RSESPPLKSTLRPPKLAPSAWQLYFTDWIQRHQASSSKKLNVAQAAKEAGQEYAKLSDEE 392
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQ 148
K PY +++L K E L AY + L + ++ T++ ++GKS + D
Sbjct: 393 KEPYRRRSLEAKEARERELNAYMRTLTPE--DIKRENQYRTAQRKAGKSRKGNLKDPNAP 450
Query: 149 EFSSQVSSYFM 159
+ +S+YFM
Sbjct: 451 K--KPLSAYFM 459
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRPLS+Y +F + +RKS P K V + K G+KW M++AEKAPYV KA
Sbjct: 116 DENAPKRPLSSYMLFSQTYRKSLVAENPTLK-VTEVAKLVGEKWGKMNDAEKAPYVNKAA 174
Query: 98 NKKAEYEL 105
KA Y +
Sbjct: 175 ELKAAYNI 182
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN--KSVAAMGKAGGQKWKSMSEAEK 89
K+ KKKD NAPKRP + +F+F ++ R+ K + + KS + + K G++W ++++EK
Sbjct: 5 KSSKKKDPNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDSEK 64
Query: 90 APYVQKALNKKAEYELALEAYKKQLND 116
Y +++KK +E YKKQ +
Sbjct: 65 DKY--NSVSKK-----NMEVYKKQFEE 84
>gi|409049822|gb|EKM59299.1| hypothetical protein PHACADRAFT_249698 [Phanerochaete carnosa
HHB-10118-sp]
Length = 580
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R E F D
Sbjct: 424 RTAQRKAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRSDAALVLEVFGDETETTKQSVLAA 483
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
KW+SM++ E+ P++ +A +K EYE A + Y+
Sbjct: 484 AKWRSMTDEERKPFLAQAEQEKLEYEAARKMYE 516
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 25 ENKPKKEKAGKKKDSNAPKRPL--------SAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
E++P E+ G+ K +AP++ L SA+ ++ D+ + + + P +VA K
Sbjct: 316 EHRPT-ERTGEGKAGDAPQKSLFRPPKLAPSAWQLYFTDWIQRHQATSPKKLNVAQAAKE 374
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGK 136
GQ++ +S EK PY +++ K E AY + L + ++ T++ ++GK
Sbjct: 375 AGQEYARLSSEEKEPYRRRSQAAKEAREREHSAYMRTLTPE--DIKRENAFRTAQRKAGK 432
Query: 137 SSSSEINDEAEQEFSSQVSSYFM 159
S I D + +S+YFM
Sbjct: 433 SRKGNIKDPNAPK--KPLSAYFM 453
>gi|402882719|ref|XP_003904882.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Papio anubis]
Length = 132
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 18 MLKARKAENKPKKE-----KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
M KA K N +++ K GKK D NAPKRPLS +F+F +F K + P S+
Sbjct: 1 MAKADKVHNDTERKDYGPAKGGKKNDPNAPKRPLSGFFLFCSEFHPKMKSTNP-GISIGD 59
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGA-GVSEDSW 126
+ K G+ WK+++++EK PYV K + K +YE + YK + +GA G ++ +W
Sbjct: 60 VAKKLGEMWKNLNDSEKQPYVTK-VAKLMKYEKDVADYKSKGKLDGAKGPAKVAW 113
>gi|302694187|ref|XP_003036772.1| EXP1-like protein [Schizophyllum commune H4-8]
gi|300110469|gb|EFJ01870.1| EXP1-like protein [Schizophyllum commune H4-8]
Length = 526
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G +D NAPK+PLSAYF+F+ R + KE F D +
Sbjct: 388 RTAQRKAGKSRKGNLRDPNAPKKPLSAYFMFLSHIRSNPHLVKEIFGDEQETTRQSSLAA 447
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
Q W+ M++ + P++ +A K EYE A Y++ G +
Sbjct: 448 QYWREMTDEGRRPFLAQAEKDKLEYEAARRLYEEGTTTPGTNI 490
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 9 VAQKKPHADMLKARKA---ENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP 65
V+Q P A + + ++A E + A K + PK SA+ ++ D+ + + S
Sbjct: 268 VSQDDPDATVRRRKRAAPSEGSQAESGAPTKSELRPPKLAPSAWQLYFTDWIQKQQASST 327
Query: 66 DNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDS 125
+VA K GQ + ++S AEK PY ++ KA+ E L++Y ++L + ++
Sbjct: 328 RKLNVAQAAKEAGQDYAALSAAEKEPYKARSEALKAQREKELDSYLRKLTPE--DIKREN 385
Query: 126 WKSTSEVQSGKSSSSEINDEAEQEFSSQVSSYFM 159
T++ ++GKS + D + +S+YFM
Sbjct: 386 AFRTAQRKAGKSRKGNLRDPNAPK--KPLSAYFM 417
>gi|443897201|dbj|GAC74542.1| putative N2 [Pseudozyma antarctica T-34]
Length = 1388
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F+ R + F +
Sbjct: 1289 RSAQRKAGKSRKGNLKDPNAPKKPLSAYFLFLRAIRADPNMTQAVFEGEQETTKQSVLAA 1348
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
KW+S+SE EK PY+ +A KA YE Y+
Sbjct: 1349 AKWRSLSETEKQPYLDRAEADKARYERLRREYE 1381
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 10 AQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK- 68
AQ +P AD A+K + + + + K PK+ SA+ IF + + K PD +
Sbjct: 1172 AQPEPAADTKPAKKQKKEDPPKPSALKSRLKPPKQAPSAWQIFFTEELQKIKAQSPDERL 1231
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKS 128
+VA + K GQ++ ++ E++K + +++L K +E + +K +L + +++
Sbjct: 1232 NVAHVAKDAGQRYAALPESKKQEFHRRSLEAKELWEQEMADWKAKLTPE--DIRQENLYR 1289
Query: 129 TSEVQSGKSSSSEINDEAEQEFSSQVSSYFM 159
+++ ++GKS + D + +S+YF+
Sbjct: 1290 SAQRKAGKSRKGNLKDPNAPK--KPLSAYFL 1318
>gi|355563197|gb|EHH19759.1| hypothetical protein EGK_02478, partial [Macaca mulatta]
Length = 121
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 18 MLKARKAENKPKKE-----KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
M KA K N +++ K GK D NAPKRPLS +F+F +F K + P S+
Sbjct: 1 MAKADKVHNDTERKDYGPAKGGKNNDPNAPKRPLSGFFLFCSEFHPKMKSTNP-GISIGD 59
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGA-GVSEDSWKSTSE 131
+ K G+ WK+++++EK PYV K + K +YE + YK + +GA G ++ +W+ E
Sbjct: 60 VAKKLGEMWKNLNDSEKQPYVTK-VAKLMKYEKDVADYKSKGKLDGAKGPAKVAWEDMEE 118
>gi|392592955|gb|EIW82281.1| HMG-box [Coniophora puteana RWD-64-598 SS2]
Length = 279
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + KD NAPK+PLSAYF+F++ R +E F D +
Sbjct: 148 RTAQRKAGKSRRSNLKDPNAPKKPLSAYFMFLQRIRSDPALVREVFGDEQETTKQSVLAA 207
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVS 122
KW+ MS+ E+ P++ +A +K EYE A Y++ G ++
Sbjct: 208 AKWRDMSDDERKPFLARAEQEKLEYEAARRLYEEGTPALGTNIN 251
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
D L A K E +K+ A K PK SA+ ++ D+ + +++ +VA K
Sbjct: 39 DALVAIKTEEIREKDHAPSKSVLKPPKLAPSAWQLYFTDWIQRHQQTSTRKLNVAQAAKE 98
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGK 136
GQ++ +S AEK PY +K+ K E E Y K L + + +++ T++ ++GK
Sbjct: 99 AGQEYAELSAAEKEPYKRKSAALKQERERQNAEYLKTLTPD--DIKKENAFRTAQRKAGK 156
Query: 137 SSSSEINDEAEQEFSSQVSSYFM 159
S S + D + +S+YFM
Sbjct: 157 SRRSNLKDPNAPK--KPLSAYFM 177
>gi|242389922|dbj|BAH80451.1| putative HMG1 protein [Lentinula edodes]
Length = 560
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR---KSFKESFPDNKSVAAMGKAGG 78
R A+ K K + KD NAPK+PLSAYF+F++ R + ++ F D
Sbjct: 424 RAAQRKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRANPQLVQKVFGDETETTKQSVLAA 483
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVS 122
KW+SM++ E+ P++ +A +K EYE A Y++ G +S
Sbjct: 484 AKWRSMTDDERKPFLAQAEQEKMEYEAARRLYEEGTTGYGTSIS 527
>gi|397502952|ref|XP_003822100.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
gi|410056873|ref|XP_003317692.2| PREDICTED: high mobility group protein B3-like [Pan troglodytes]
Length = 221
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 33 AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
GKKKD NA KRPLS +F+F +F K + P S+ M K G+ W + S+ EK PY
Sbjct: 103 GGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNP-GISIGDMAKKLGEMWINYSDREKQPY 161
Query: 93 VQKALNKKAEYELALEAYK-KQLNDNGAGVSEDSW 126
+ KA + K +YE + YK K D+ G ++ +W
Sbjct: 162 ITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAW 196
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRPLS +F+F +FR K + P S+ + K G W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNP-GISIGDVAKKLGDMWNNLSDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVANYKSKGKSDGA 169
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 33 AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
GKKKD NA KRPLS +F+F +F K + P S+ M K G+ W + S+ EK PY
Sbjct: 83 GGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNP-GISIGDMAKKLGEMWINYSDREKQPY 141
Query: 93 VQKALNKKAEYELALEAYK-KQLNDNGAGVSEDSW 126
+ KA + K +YE + YK K D+ G ++ +W
Sbjct: 142 ITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAW 176
>gi|413938186|gb|AFW72737.1| hypothetical protein ZEAMMB73_544458 [Zea mays]
Length = 96
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 53 MEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY-K 111
M +FR+ ++ P NKSVA + KA G+KW++MS+ EK PYV +A KK +YE + K
Sbjct: 1 MSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDK 60
Query: 112 KQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
K+ + +ED S SEV SS E ND+ E
Sbjct: 61 KESTSSKKAKTEDEDGSKSEVDDEDGSSDEENDDDE 96
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY IF + R + +E P N + +GK G++WK++S+ ++ PY +
Sbjct: 19 KKKDPNAPKRGLSAYMIFANEQRAAVREENP-NITFGQVGKVLGERWKALSDKQRVPYEE 77
Query: 95 KALNKKAEYELALEAY 110
KA K YE AY
Sbjct: 78 KAATDKQRYEDEKAAY 93
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF +FR KE P S+ + K G+ W S
Sbjct: 69 PKGEKKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETP-GLSIGDVAKKLGEMWNKTSSE 127
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +YE + AY+
Sbjct: 128 EKQPYEKKAARLKEKYEKDITAYR 151
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+KD NAPKRP SA+F+F ++R S K+ +P S+ K G+ W +S++EK PY +
Sbjct: 90 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQYP-GLSIGDCAKKLGEMWSKLSQSEKQPYEE 148
Query: 95 KALNKKAEYELALEAYK 111
KA + +Y+ + AY+
Sbjct: 149 KAQKLREKYDRDMVAYR 165
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+KD NAPKRP SA+F+F ++R S K+ +P S+ K G+ W +S++EK PY +
Sbjct: 90 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQYP-GLSIGDCAKKLGEMWSKLSQSEKQPYEE 148
Query: 95 KALNKKAEYELALEAYK 111
KA + +Y+ + AY+
Sbjct: 149 KAQKLREKYDRDMVAYR 165
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRPLSAY F D R K+S P + S+ +GKA G WK +S+ EK PY +KA
Sbjct: 27 DPNAPKRPLSAYMYFASDKRVEMKKSDP-SLSLGEVGKATGAAWKELSDKEKEPYQKKAD 85
Query: 98 NKKAEYELALEAYKKQ 113
KA YE AY+K+
Sbjct: 86 KDKARYEKEKAAYEKK 101
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K GKKKD NAPK P S +F+F +FR K + P S+ + K G+ W S+S++EK P
Sbjct: 249 KGGKKKDPNAPKTPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNSLSDSEKQP 307
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGA 119
Y+ KA K + E + YK + +GA
Sbjct: 308 YITKAAQLKEKDEKDVADYKSKGKFDGA 335
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K + K K+ KKKD NAPKR LSAY IF + R S +E P + + +GK
Sbjct: 1 MPKEKSTTRKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRASVREENP-SITFGQVGKVL 59
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
G++WK++++ ++ PY +KA K YE AY +L +
Sbjct: 60 GERWKALTDKQRKPYEEKAATDKQRYEDEKAAYNSRLEE 98
>gi|389744542|gb|EIM85725.1| hypothetical protein STEHIDRAFT_81292 [Stereum hirsutum FP-91666
SS1]
Length = 581
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R ++ F +
Sbjct: 409 RSAQRKAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRSDPALVQDVFGEETETTKQSVLAA 468
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK--QLNDNGAGVS 122
KW+SM++ EK P++ +A +K EYE A + Y++ + D G +S
Sbjct: 469 GKWRSMTDDEKRPFLAQAEQEKLEYESARKRYEEGSMMMDYGTSIS 514
>gi|409043132|gb|EKM52615.1| hypothetical protein PHACADRAFT_164552 [Phanerochaete carnosa
HHB-10118-sp]
Length = 115
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 30 KEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
KEKA +K KD NAPKR LSAY F +D+R+ K PD S +GK G KWK + E
Sbjct: 16 KEKAPRKTKKDKNAPKRALSAYMFFSQDWRERVKAENPDA-SFGELGKLLGTKWKELDEE 74
Query: 88 EKAPYVQKALNKKAEYE 104
EK PY+++A KA E
Sbjct: 75 EKKPYIEQAERDKARAE 91
>gi|118343938|ref|NP_001071793.1| transcription factor protein [Ciona intestinalis]
gi|70570759|dbj|BAE06616.1| transcription factor protein [Ciona intestinalis]
Length = 164
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
+KD NAPK+PL+AYFIFM D R+ + P + S+ + K G+KW+ S +K P+ +K
Sbjct: 15 RKDKNAPKKPLTAYFIFMNDCRQKVIKENP-SLSITEISKLVGKKWRETSTKDKEPFNKK 73
Query: 96 ALNKKAEYELALEAY 110
A + EY LE Y
Sbjct: 74 AAKLREEYNKKLEKY 88
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+KD NAPKRP SA+F+F ++R S K+ +P S+ K G+ W ++++EK PY +
Sbjct: 90 KRKDPNAPKRPPSAFFVFCSEYRPSVKQQYP-GLSIGDCAKKLGEMWSKLTQSEKQPYEE 148
Query: 95 KALNKKAEYELALEAYK 111
KA + +Y+ + AY+
Sbjct: 149 KAQKLREKYDRDMVAYR 165
>gi|357139210|ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
distachyon]
Length = 537
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D + PK+P+SAYF++ ++ R + + K+V +GK G++WKSM++A+KAPY + A
Sbjct: 325 DPSKPKQPMSAYFVYSQERRAAL---VAEKKNVPEIGKITGEEWKSMTDAQKAPYEEVAS 381
Query: 98 NKKAEYELALEAYKK 112
+K EY +E YK+
Sbjct: 382 KQKEEYHKQMEVYKQ 396
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S++ +F ++ RK E P +N ++ A+ KWK +S EK + +K
Sbjct: 450 DPNRPKKPASSFLLFSKEARKQLVEERPGVNNSTINALISV---KWKELSGTEKKTWSEK 506
Query: 96 ALNKKAEYELALEAY 110
A A Y+ +E Y
Sbjct: 507 AAEGMAAYKREMEEY 521
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F D R +E P S +GK G+KWKS+S+ E+ PY
Sbjct: 20 KKKDPNAPKRGLSAYMFFANDNRDKVREENP-GISFGQVGKMLGEKWKSLSDKERKPYED 78
Query: 95 KALNKKAEYELALEAYK 111
KA K YE AYK
Sbjct: 79 KAAADKKRYEDEKAAYK 95
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 20 KARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQ 79
+A K +N KK + KK D +APKR LSAY F +D R + KE P S +GK G+
Sbjct: 12 RAAKDDNDTKKARRSKK-DPSAPKRGLSAYMFFSQDQRPTVKEENP-KASFGEIGKILGE 69
Query: 80 KWKSMSEAEKAPYVQKALNKKAEYE 104
+WK++SE EK PY++KA + K YE
Sbjct: 70 RWKALSEEEKKPYLKKAEDDKKRYE 94
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 222 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 280
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 281 DKVPYEKKAAKLKEKYEKDITAYR 304
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 26 NKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
N K ++ K+KD NAPKRPLSAY F +D+R+ K PD S +G+ G KWK +S
Sbjct: 20 NPVKTKRVKKEKDPNAPKRPLSAYMYFSQDWRERIKTENPDV-SFGEIGRLLGLKWKGLS 78
Query: 86 EAEKAPYVQKALNKKAEYE 104
E EK PY A K +E
Sbjct: 79 EEEKKPYEDMASRDKKRHE 97
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K GKKKD NAPKRP S +F+F +F K + P + + K G+ WK+++++EK P
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNP-GIPIGDVAKKLGEMWKNLNDSEKQP 140
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGA 119
Y+ +A K +YE + YK + +GA
Sbjct: 141 YITQAAKLKEKYEKDVAVYKSKGKSDGA 168
>gi|403217000|emb|CCK71495.1| hypothetical protein KNAG_0H00800 [Kazachstania naganishii CBS
8797]
Length = 118
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK KKKD NAPKR +SAY F + R K P N + +GK G+KWK+MS
Sbjct: 31 PKKRVTRKKKDPNAPKRSMSAYMFFANENRDIVKSENP-NATFGQLGKLLGEKWKNMSTE 89
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
+K PY KA K YE E Y
Sbjct: 90 DKEPYDAKAAADKKRYESEKELY 112
>gi|359486418|ref|XP_003633441.1| PREDICTED: high mobility group B protein 1 [Vitis vinifera]
Length = 151
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 15/95 (15%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKRP SA+F+F+E+FRK +K+ P+ K+V+ A+KAPY KA
Sbjct: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVS---------------ADKAPYEAKAA 96
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
+K++YE + AY K+ E+S +S SEV
Sbjct: 97 KRKSDYEKLMAAYNKKQESMADDDEEESDRSKSEV 131
>gi|170091612|ref|XP_001877028.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648521|gb|EDR12764.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 564
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + KD NAPK+PLSAYF+F++ R + +E F +
Sbjct: 425 RAAQRKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRANPQLVREIFGEETETTKQSVLAA 484
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
KW+SM++ E+ P++ +A +K EYE A Y++
Sbjct: 485 AKWRSMTDGERQPFLAQAEQEKMEYEAARRLYEE 518
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNA--------PKRPLSAYFIFMEDFRKSFKESFPDNK 68
D RK + P ++ +K S++ PK SA+ ++ D+ + + S
Sbjct: 308 DATVRRKKRSPPTEDIPVTEKPSDSTLKSVLRPPKLAPSAWQLYFTDWIQRQQASGTRKL 367
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKS 128
+VA K GQ++ +S AEK PY +++ K E L AY + L + E+++++
Sbjct: 368 NVAQAAKEAGQEYACLSAAEKEPYKRRSQAAKEARERELNAYMRTLTPDDIK-RENAFRA 426
Query: 129 TSEVQSGKSSSSEINDEAEQEFSSQVSSYFM 159
++ ++GKS S I D + +S+YFM
Sbjct: 427 -AQRKAGKSRKSNIKDPNAPK--KPLSAYFM 454
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 30 KEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
K + ++KD NAPKRPLSAY F +D+R+ K P+ S +G+ G KWKS+ E EK
Sbjct: 1 KRRVKREKDPNAPKRPLSAYMFFSQDWRERIKTENPEV-SFGEIGRLLGLKWKSLGEEEK 59
Query: 90 APYVQKALNKKAEYELALEAYKK 112
PY A K +E Y++
Sbjct: 60 KPYEDMACRDKKRHETEKAEYER 82
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF +FR KE P S+ + K G+ W S
Sbjct: 69 PKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETP-GLSIGDVAKKLGEMWNKTSAE 127
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK P+ +KA K +YE + AY+
Sbjct: 128 EKQPFEKKAARLKEKYEKDITAYR 151
>gi|221219844|gb|ACM08583.1| High mobility group protein B2 [Salmo salar]
Length = 211
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP SA+F+F +FR + K+ FP S+ K G W + +K P+ +
Sbjct: 90 KKKDPNAPKRPPSAFFVFSAEFRPTVKQEFPGC-SIGQCAKKLGIMWGQQTPTQKQPFEE 148
Query: 95 KALNKKAEYELALEAYKKQLN 115
KAL + +Y+ + AY+ N
Sbjct: 149 KALRLREKYDKDMAAYRSGAN 169
>gi|62362190|gb|AAX81532.1| amphiHMG1/2-like protein [Adineta ricciae]
Length = 142
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD NAPKRPLSA+F+F +D R K+ P + SV + K G +WK +S+ + Y QKA
Sbjct: 13 KDPNAPKRPLSAFFLFSQDERPDIKKKSP-SLSVGDISKEIGSRWKKVSDDVRKRYEQKA 71
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVS 122
++K +YE+ + YKK +G G S
Sbjct: 72 ADEKKKYEVRVAEYKK----SGGGAS 93
>gi|390601122|gb|EIN10516.1| hypothetical protein PUNSTDRAFT_132606 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 619
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R ++ K K + G KD NAPK+PLSAYF+F++ R +E F
Sbjct: 451 RTSQRKAGKSRKGNIKDPNAPKKPLSAYFMFLQAIRSDPGLVREVFGHETETTKQSVLAA 510
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
KW+SM++ E+ P++ +A +K EYE A + Y++
Sbjct: 511 SKWRSMTDEERKPFLAQAEREKLEYETARKIYEE 544
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK SA+ ++ D+ + +E+ +VA K GQ++ +S AEK PY +++ K
Sbjct: 367 PKLAPSAWQLYFTDWIQRHQETSTKKLNVAQAAKEAGQEYALLSAAEKEPYKRRSQMLKE 426
Query: 102 EYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQVSSYFMGF 161
+ E AY + L + ++ TS+ ++GKS I D + +S+YFM
Sbjct: 427 QREREHAAYMRTLTPE--DIKRENAFRTSQRKAGKSRKGNIKDPNAPK--KPLSAYFMFL 482
Query: 162 YCFSS 166
S
Sbjct: 483 QAIRS 487
>gi|393219482|gb|EJD04969.1| HMG-box [Fomitiporia mediterranea MF3/22]
Length = 114
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F +D+R+ K PD +GK G KWK M E+EK PY+++
Sbjct: 27 KKDPNAPKRALSAYMFFSQDWRERVKAENPDA-GFGEVGKLLGAKWKEMDESEKRPYIEQ 85
Query: 96 ALNKKAEYELALEAYKKQ 113
A KA E Y+K+
Sbjct: 86 AARDKARAEEEKANYEKK 103
>gi|335281869|ref|XP_003353912.1| PREDICTED: FACT complex subunit SSRP1 [Sus scrofa]
Length = 709
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPTEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR +SA+F++ D R + + PD + V + K G++WK +S+++KA Y +
Sbjct: 92 KKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGEIAKILGRQWKEISDSDKAKYEK 150
Query: 95 KALNKKAEYELALEAYKKQLNDNGAGVS 122
KA +KA Y+ L YK+ G G S
Sbjct: 151 KAQTEKARYQKELAEYKR----TGGGAS 174
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQK 95
KD N PK +SAY F+++ RK ++ +PD + V K ++WK+M++ EK +
Sbjct: 4 KDKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDL 63
Query: 96 ALNKKAEYELALEAY 110
A K YE + Y
Sbjct: 64 AETDKRRYEREMAKY 78
>gi|332260744|ref|XP_003279440.1| PREDICTED: uncharacterized protein LOC100604184 [Nomascus
leucogenys]
Length = 414
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG---GQKWKSMSEAEKAP 91
KKKD NAP+RPLS +F+F +FR K + P + G G+ WK+++++EK P
Sbjct: 86 KKKDPNAPQRPLSGFFLFCSEFRPKIKSTNPGKTGIFGFGDVAKKLGEMWKNLNDSEKQP 145
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGA 119
++ +A K +YE + K + +G+
Sbjct: 146 HITQAAKLKEKYEKDVAVCKSKGKSDGS 173
>gi|1806648|gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus]
Length = 460
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P SV + K
Sbjct: 276 MAKDRKSRKKPLEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISVTDLSKKA 332
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 333 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 366
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKVETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKAAKLKEKYEKDITAYR 162
>gi|223942599|gb|ACN25383.1| unknown [Zea mays]
gi|414881085|tpg|DAA58216.1| TPA: hypothetical protein ZEAMMB73_949955 [Zea mays]
Length = 118
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKS 83
+ KP+ + AGK D APK+P +A+F FMEDFRK +K+ P KS+ +GKA G+KW +
Sbjct: 24 TKRKPRPKPAGKG-DPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEIGKACGEKWNT 82
Query: 84 MS 85
M+
Sbjct: 83 MT 84
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
LK + P + K++D NAPK+PL+A+F+F + +R+ E P+ K + + +
Sbjct: 28 FLKDQNVPEIPTTTEKKKERDPNAPKKPLTAFFLFNQKYRQKVVERNPEIK-LTQISQMA 86
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
G KW SMSE EK PY+ +Y A E Y ++L D
Sbjct: 87 GNKWTSMSEQEKKPYLD-------QYNAAKEKYDQELKD 118
>gi|432113411|gb|ELK35821.1| FACT complex subunit SSRP1 [Myotis davidii]
Length = 709
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPMEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK+MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKAMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKVETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKAAKLKEKYEKDITAYR 162
>gi|3551257|dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK P+SA+F+FM + R + K+V +GK G++WK+M+E EKAPY + A K
Sbjct: 290 PKHPVSAFFLFMNERRADL---VAEKKNVLEVGKITGEEWKNMTEKEKAPYEEMAKKNKN 346
Query: 102 EYELALEAYKKQLNDNGAGVSED 124
+Y +E YKK+ ++ A + ++
Sbjct: 347 QYLQQMEVYKKKKDEEAASLQKE 369
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 7 VAVAQKKPHADMLKARKAENKPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFP 65
+ + +KK + L + E + KK+K KK D N PKRP S++ +F ++ RK+ E P
Sbjct: 382 MQLLKKKEKTENLIKKTKEERQKKQKGEKKIVDPNKPKRPASSFLLFSKEARKTISEERP 441
Query: 66 --DNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+N ++ A+ KWK +S EK + +KA A+EAYKK++ +
Sbjct: 442 GINNSTLNALISV---KWKEISHEEKQLWNEKAAG-------AMEAYKKEMEE 484
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR +SA+F++ D R + + PD + V + K G++WK +S+++KA Y +
Sbjct: 91 KKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDSDKAKYEK 149
Query: 95 KALNKKAEYELALEAYKKQLNDNGAGVS 122
KA +KA Y+ L YK+ +G G S
Sbjct: 150 KAQTEKARYQKELAEYKR----SGGGAS 173
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQK 95
KD N PK +SAY F+++ R+ ++ +P+ + V + +WK+M++ EK +
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQAL 62
Query: 96 ALNKKAEYELALEAY 110
A K YE + Y
Sbjct: 63 AEADKRRYEQDMAKY 77
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKAAKLKEKYEKDITAYR 162
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F++D+R K PD S GK G+KWK+MS AEK P+
Sbjct: 25 KKDPNAPKRGLSAYMFFVQDYRPKIKNDHPDV-SFGETGKLLGEKWKAMSAAEKKPFEDL 83
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEV 132
A A+ +L E KK G G + S KS V
Sbjct: 84 A----AKDKLRAEKDKKAYLATGGGEKKTSKKSKPAV 116
>gi|326499588|dbj|BAJ86105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D + PK+P+SAYF++ ++ R + + K+V +GK G++WK M+EA+KAPY + A
Sbjct: 330 DPSKPKQPMSAYFLYSQERRGAL---VAEKKTVPEIGKITGEEWKGMTEAQKAPYEEAAR 386
Query: 98 NKKAEYELALEAY-KKQLNDNGA 119
+K Y+ +E Y +K+L +N +
Sbjct: 387 KQKEAYQKQMEVYNQKKLGENAS 409
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S++ +F ++ RK E P +N +++A+ KWK +S AEK + QK
Sbjct: 455 DPNRPKKPASSFLLFSKEARKQLAEERPGVNNSTLSALISV---KWKDLSSAEKKVWSQK 511
Query: 96 ALNKKAEYELALEAYKK 112
A A Y++ ++ Y K
Sbjct: 512 AAQGMAAYKMEMDEYTK 528
>gi|417404085|gb|JAA48818.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 709
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKERKSRKKPMEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKAAKLKEKYEKDITAYR 162
>gi|155371817|ref|NP_001094511.1| FACT complex subunit SSRP1 [Bos taurus]
gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos taurus]
gi|440894802|gb|ELR47155.1| FACT complex subunit SSRP1 [Bos grunniens mutus]
Length = 709
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P SV + K
Sbjct: 525 MAKDRKSRKKPLEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISVTDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKVPYEKKAAKLKEKYEKDITAYR 162
>gi|164661201|ref|XP_001731723.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
gi|159105624|gb|EDP44509.1| hypothetical protein MGL_0991 [Malassezia globosa CBS 7966]
Length = 97
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 42/75 (56%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD APKRPLSAY F +D+R + K SV +G+ G KWK MS+ EK PYV+
Sbjct: 19 KKDPAAPKRPLSAYMFFSQDWRDASKPRTLTQDSVCDVGRLLGTKWKEMSDEEKKPYVEM 78
Query: 96 ALNKKAEYELALEAY 110
A K E AY
Sbjct: 79 ASKDKERAESEKAAY 93
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F D R +E P S +GK G++WK++S++E+ PY +
Sbjct: 18 KKKDPNAPKRGLSAYMFFANDNRDKVREENP-GISFGQVGKMLGERWKALSDSERRPYEE 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAATDKKRYE 86
>gi|296479522|tpg|DAA21637.1| TPA: structure specific recognition protein 1 [Bos taurus]
Length = 709
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P SV + K
Sbjct: 525 MAKDRKSRKKPLEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISVTDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP SA+F+F D R KE P S+ + K G+ W + +KAPY
Sbjct: 88 KKKDPNAPKRPPSAFFVFCSDHRPKIKEDNP-GISIGDIAKKLGELWSTQGPKDKAPYEA 146
Query: 95 KALNKKAEYELALEAYKKQ--LNDNGAG 120
+A K +YE + AYK + ++ N AG
Sbjct: 147 RAAKLKEKYEKDVAAYKAKGGVSKNDAG 174
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVA--AMGKAGGQKWKSMSEAEKAPYVQK 95
D NAPKR LSAY F D R + + DN +A +GKA G+KWK++++AEK PY +K
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRA---DNPGIAFGQVGKALGEKWKTLTDAEKVPYEEK 77
Query: 96 ALNKKAEYELALEAYK 111
A K YE AYK
Sbjct: 78 ATADKKRYEDEKAAYK 93
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
Length = 93
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK+ +KKD NAPKR LSAY F D R K P N + +GK G KWK +++
Sbjct: 7 PKRRVVRRKKDPNAPKRGLSAYMFFANDNRDIVKAENP-NITFGQIGKVLGAKWKELNDE 65
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EK PY KA K YE E Y
Sbjct: 66 EKQPYQDKADADKKRYESEKELY 88
>gi|344299407|ref|XP_003421377.1| PREDICTED: FACT complex subunit SSRP1 [Loxodonta africana]
Length = 709
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|336373684|gb|EGO02022.1| hypothetical protein SERLA73DRAFT_177720 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386499|gb|EGO27645.1| hypothetical protein SERLADRAFT_461466 [Serpula lacrymans var.
lacrymans S7.9]
Length = 365
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + KD NAPK+PLSAYF+F++ R +E F + +
Sbjct: 217 RTAQRKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRSEPALVREVFGEEQETTKQSVLAA 276
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV 121
KW+SM++ E+ P++ +A +K +YE A Y++ G +
Sbjct: 277 AKWRSMTDDERKPFLAQAEQEKLDYEAARRMYEEGTTGFGTSI 319
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK SA+ ++ D+ + + + +VA K GQ++ S+S EK PY +++L K
Sbjct: 133 PKLAPSAWQLYFTDWIQRHQATNTRKLNVAQAAKEAGQEYASLSTEEKEPYKRRSLALKE 192
Query: 102 EYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQVSSYFM 159
E AY + L + ++ T++ ++GKS S I D + +S+YFM
Sbjct: 193 AREREHAAYMRTLTPE--DIKRENAFRTAQRKAGKSRKSNIKDPNAPK--KPLSAYFM 246
>gi|301774634|ref|XP_002922750.1| PREDICTED: FACT complex subunit SSRP1-like [Ailuropoda melanoleuca]
Length = 709
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|296218242|ref|XP_002755324.1| PREDICTED: FACT complex subunit SSRP1 [Callithrix jacchus]
Length = 709
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|410973949|ref|XP_003993410.1| PREDICTED: FACT complex subunit SSRP1 [Felis catus]
Length = 709
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|383872505|ref|NP_001244820.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|402893460|ref|XP_003909913.1| PREDICTED: FACT complex subunit SSRP1 [Papio anubis]
gi|355566511|gb|EHH22890.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
mulatta]
gi|355752113|gb|EHH56233.1| Facilitates chromatin transcription complex subunit SSRP1 [Macaca
fascicularis]
gi|380784229|gb|AFE63990.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|383421069|gb|AFH33748.1| FACT complex subunit SSRP1 [Macaca mulatta]
gi|384949008|gb|AFI38109.1| FACT complex subunit SSRP1 [Macaca mulatta]
Length = 709
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP SA+F+F ++R + K P N ++ + K G+ W S ++AP+ Q
Sbjct: 90 KKKDPNAPKRPPSAFFVFCSEYRPTVKSEHP-NLTIGEIAKKLGELWSKQSSKDRAPFEQ 148
Query: 95 KALNKKAEYELALEAYK 111
KA + +YE + AY+
Sbjct: 149 KAGKLREKYEKEVAAYR 165
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP SA+F+F ++R + K P N ++ + K G+ W S ++AP+ Q
Sbjct: 90 KKKDPNAPKRPPSAFFVFCSEYRPTVKSEHP-NLTIGEIAKKLGELWSKQSSKDRAPFEQ 148
Query: 95 KALNKKAEYELALEAYK 111
KA + +YE + AY+
Sbjct: 149 KAGKLREKYEKEVAAYR 165
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
K EK KKD NAPKR LSAY F + R++ +E P S +GK G++WK++S+ +
Sbjct: 11 KAEKKRSKKDPNAPKRGLSAYMFFANEQRENVREENP-GVSFGQVGKILGERWKALSDKQ 69
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLNDN 117
+APY KA K YE +AY +D+
Sbjct: 70 RAPYEAKAAADKKRYEDEKQAYNADGDDD 98
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY
Sbjct: 3 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNN 61
Query: 95 KALNKKAEYELALEAYKKQLNDNGA 119
KA K +YE + YK + +GA
Sbjct: 62 KAAKLKEKYEKDVADYKSKGKFDGA 86
>gi|403254821|ref|XP_003920153.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 642 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 698
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 699 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 732
>gi|281343903|gb|EFB19487.1| hypothetical protein PANDA_011742 [Ailuropoda melanoleuca]
Length = 607
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 508 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 564
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 565 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 598
>gi|345783817|ref|XP_859953.2| PREDICTED: FACT complex subunit SSRP1 isoform 4 [Canis lupus
familiaris]
Length = 711
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 527 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKADHP-GISITDLSKKA 583
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 584 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 617
>gi|301763549|ref|XP_002917185.1| PREDICTED: high mobility group protein B4-like [Ailuropoda
melanoleuca]
Length = 193
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++AEK PY Q+A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKASGKMWSATTDAEKQPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y+ LE Y+KQ
Sbjct: 150 LLRAKYQEELEIYRKQ 165
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDN-KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 11 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 71 ARYQEEMMNY 80
>gi|126333240|ref|XP_001376238.1| PREDICTED: FACT complex subunit SSRP1 [Monodelphis domestica]
Length = 712
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
++K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 IVKERKSRKKPVEGKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G+ WK MS+ +K + +KA K EYE A++ Y
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEEAKREYEKAMKEY 614
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R + +E P S +GK G++WK+++E ++APY
Sbjct: 17 KKKDPNAPKRGLSAYMFFANEQRDNVREENP-GISFGQVGKVLGERWKALNEKQRAPYEA 75
Query: 95 KALNKKAEYELALEAYKKQLNDN 117
KA K YE +Y Q +D+
Sbjct: 76 KAAADKKRYEDEKASYNAQDDDD 98
>gi|431918516|gb|ELK17735.1| 182 kDa tankyrase-1-binding protein [Pteropus alecto]
Length = 2600
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPTEVKKGK--DPNAPKRPMSAYMLWLNASREKIKLDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|145540136|ref|XP_001455758.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423566|emb|CAK88361.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
Query: 26 NKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKS------VAAMGKAG 77
+KP+K+K ++D NAPKRPL+ +F+F + +R E P D + + + +
Sbjct: 20 DKPEKKK---ERDPNAPKRPLTPFFLFSQKYRDKVLERNPGIDQRDYSLEVKLTQISQMA 76
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY--KKQLNDN 117
GQKW SMSE EK PYV + K +Y+ L+ Y K LN N
Sbjct: 77 GQKWNSMSEEEKQPYVDQYNEAKNKYDGDLKVYNDKHGLNTN 118
>gi|395544035|ref|XP_003773918.1| PREDICTED: FACT complex subunit SSRP1 [Sarcophilus harrisii]
Length = 712
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
++K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 IVKERKSRKKPVEGKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G+ WK MS+ +K + +KA K EYE A++ Y
Sbjct: 582 GEIWKGMSKDKKEEWDRKAEEAKREYEKAMKEY 614
>gi|384246550|gb|EIE20040.1| hypothetical protein COCSUDRAFT_83556 [Coccomyxa subellipsoidea
C-169]
Length = 140
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 25 ENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
E P+ +K KK +AP+RP SAY FM +FR+ +K P+ V+ +G A G+ W+S+
Sbjct: 3 EEAPRVKKRRAKKPKDAPRRPKSAYMFFMAEFREKWKVDHPEVNRVSDVGVAAGEAWRSL 62
Query: 85 SEAEKAPYVQKALNKKAEYELALEAY 110
+ +KA Y ++++ KA Y + Y
Sbjct: 63 TPEQKAVYEEQSVGSKATYAAEIAEY 88
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A K++ +PK ++ KKD NAPKR LSAY F + R++ +E P S +GK G++
Sbjct: 5 AVKSKAEPKVKRGRGKKDPNAPKRGLSAYMFFANEQRENVREENP-GVSFGQVGKILGER 63
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
WK++S+ ++APY KA K YE +AY L
Sbjct: 64 WKALSDKQRAPYEAKAAADKKRYEDEKQAYNVSL 97
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+
Sbjct: 100 KKKDPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIEDVVKKLGEMWNNLSDSEKQPYMT 158
Query: 95 KALNKKAEYELALEAYKKQLNDNGA 119
KA K +YE + YK +GA
Sbjct: 159 KAAKLKEKYEKDVADYKSNGQFDGA 183
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F D R K P S+ + K G+ W +S EK+PY QKA+
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNP-GISIGDIAKKLGEMWSKLSPKEKSPYEQKAM 149
Query: 98 NKKAEYELALEAYK-KQLNDNGA 119
K +YE + AY+ K + +GA
Sbjct: 150 KLKEKYEKDVAAYRAKGVKPDGA 172
>gi|390363101|ref|XP_781828.3| PREDICTED: FACT complex subunit SSRP1-like [Strongylocentrotus
purpuratus]
Length = 703
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 26 NKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
+KP+K K ++KD+N PKRP + Y +++ D R+ KE FP SV + K G+ W+ +
Sbjct: 553 DKPRK-KVKQEKDANRPKRPTTGYMLWLNDQREDIKEQFP-GISVTDLTKKAGEMWQKLG 610
Query: 86 EAEKAPYVQKALNKKAEYELAL 107
+ KA + + A KK EYE+A+
Sbjct: 611 DTGKAKWNEIAGEKKKEYEIAM 632
>gi|391344132|ref|XP_003746357.1| PREDICTED: high mobility group protein DSP1-like isoform 1
[Metaseiulus occidentalis]
gi|391344134|ref|XP_003746358.1| PREDICTED: high mobility group protein DSP1-like isoform 2
[Metaseiulus occidentalis]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+ + A KKKD NAPKR LSA+F F +D R K + ++ +VA + K G+KW+ ++
Sbjct: 82 PRGKAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGES-TVAEVAKELGRKWQDCTDE 140
Query: 88 EKAPYVQKALNKKAEYELALEAYKK 112
+K Y Q A K YE + AYKK
Sbjct: 141 QKGKYEQLAAKDKQRYEREMTAYKK 165
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+ P+ +SAY F++ R+ K+ P+ V A K ++WK+M+E EK + A
Sbjct: 5 DKPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHLMAAK 64
Query: 99 KKAEYELALEAY 110
K YE + Y
Sbjct: 65 DKKRYENEMSTY 76
>gi|281349442|gb|EFB25026.1| hypothetical protein PANDA_005395 [Ailuropoda melanoleuca]
Length = 181
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++AEK PY Q+A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKASGKMWSATTDAEKQPYEQRAA 147
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y+ LE Y+KQ
Sbjct: 148 LLRAKYQEELEIYRKQ 163
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDN-KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+K +KKD NAPKR LSAY F D R +E P S +GK G KWK++SE
Sbjct: 14 PEKRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENP-GISFGQVGKQLGDKWKALSET 72
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
++ PY KA K YE AY
Sbjct: 73 DRKPYDDKAAADKKRYEEEKAAY 95
>gi|391344136|ref|XP_003746359.1| PREDICTED: high mobility group protein DSP1-like isoform 3
[Metaseiulus occidentalis]
Length = 202
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+ + A KKKD NAPKR LSA+F F +D R K + ++ +VA + K G+KW+ ++
Sbjct: 97 PRGKAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGES-TVAEVAKELGRKWQDCTDE 155
Query: 88 EKAPYVQKALNKKAEYELALEAYKK 112
+K Y Q A K YE + AYKK
Sbjct: 156 QKGKYEQLAAKDKQRYEREMTAYKK 180
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+ P+ +SAY F++ R+ K+ P+ V A K ++WK+M+E EK + A
Sbjct: 20 DKPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHLMAAK 79
Query: 99 KKAEYELALEAY 110
K YE + Y
Sbjct: 80 DKKRYENEMSTY 91
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
K EK KKD NAPKR LSAY F + R++ +E P S +GK G++WK++S+ +
Sbjct: 11 KVEKRRGKKDPNAPKRGLSAYMFFANEQRENVREENP-GVSFGQVGKILGERWKALSDKQ 69
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLN 115
+APY KA K YE +AY Q +
Sbjct: 70 RAPYEAKAAADKKRYEDEKQAYNAQAD 96
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 26 NKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPD--------NKSVAAMGKAG 77
+KP+K+K ++D NAPKRPL+A+F+F + +R+ E P + + +
Sbjct: 20 DKPEKKK---ERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMA 76
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
GQKW+SMSE EK PYV + K++Y ++ Y
Sbjct: 77 GQKWQSMSEQEKQPYVDQYNQAKSKYNDDVKEY 109
>gi|23394916|gb|AAN31640.1|AF484963_1 high mobility group protein 1 [Biomphalaria glabrata]
Length = 215
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 34 GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYV 93
GK D N PKRP +AYF+F+ D+R ++K + M G++W+S+S +K PY
Sbjct: 92 GKSVDPNKPKRPPTAYFLFLADYRIRMANKGIEHKELLKMA---GEEWRSLSNEDKKPYE 148
Query: 94 QKALNKKAEYELALEAYKKQLNDNG 118
+KAL + +YE A+ Y+K +G
Sbjct: 149 KKALEESKKYESAMTEYRKTGGASG 173
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD N PKR SAYF F+ RK ++ +A K +KWK++S +K P+
Sbjct: 15 KVKDVNKPKRATSAYFFFLAQCRKEAAKAGKAPTKIAEFTKEASEKWKALSADKKKPFEA 74
Query: 95 KALNKKAEYELALEAYK 111
A + K YE + YK
Sbjct: 75 AAADDKRRYETEMAVYK 91
>gi|426245460|ref|XP_004023562.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Ovis
aries]
Length = 703
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P SV + K
Sbjct: 519 MAKDRKSRKKPLEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISVTDLSKKA 575
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + EYE A++ Y+
Sbjct: 576 GEIWKGMSKEKKEEWDRKAEEARREYEKAMKEYE 609
>gi|395858039|ref|XP_003801382.1| PREDICTED: FACT complex subunit SSRP1 [Otolemur garnettii]
Length = 710
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K G+ D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MSKDRKSRKKPMEVKKGR--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF +FR KE P S+ + K G+ W +S
Sbjct: 80 PKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETP-GLSIGDVAKRLGEMWNKISSE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +YE + AY+
Sbjct: 139 EKQPYEKKAAKLKEKYEKDIAAYR 162
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF +FR KE P S+ + K G+ W +S
Sbjct: 80 PKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETP-GLSIGDVAKRLGEMWNKISSE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +YE + AY+
Sbjct: 139 EKQPYEKKAAKLKEKYEKDIAAYR 162
>gi|355784552|gb|EHH65403.1| hypothetical protein EGM_02155, partial [Macaca fascicularis]
Length = 116
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Query: 18 MLKARKAENKPKKE-----KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
M KA K N +++ K GK D NAPKRPLS +F+F +F K + P S+
Sbjct: 1 MAKADKVHNDTERKDYGPAKGGKNNDPNAPKRPLSGFFLFCSEFHPKMKSTNP-GISIGD 59
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGA-GVSEDSWKSTSE 131
+ K G+ W +++++EK PY+ K +YE + YK + +GA G ++ +W+ E
Sbjct: 60 VAKKLGEMWNNLNDSEKQPYITK------KYEKDVADYKSKGKLDGAKGPAKVAWEDMEE 113
>gi|224072172|ref|XP_002303636.1| high mobility group family [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa]
Length = 480
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K K+KD PK+PLSA+F+F + R + +NKSV + K G++WK+M+E + P
Sbjct: 263 KTKKEKDPLKPKQPLSAFFLFCNERRAAL---LAENKSVLEVAKIAGEEWKNMTEKRRGP 319
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGAGV 121
Y + A + +Y +EAYK+ ++ +
Sbjct: 320 YEEVAKKNREKYMQEMEAYKQTKDEEAMNL 349
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 12/81 (14%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S++ +F ++ RKS + P +N ++ AM KWK ++E E+ + K
Sbjct: 394 DPNKPKKPASSFLLFSKETRKSLMDERPGINNSTLTAMISV---KWKELNEEERQIWNSK 450
Query: 96 ALNKKAEYELALEAYKKQLND 116
A AE A+EAYKK+L +
Sbjct: 451 A----AE---AMEAYKKELEE 464
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M KA K+ + ++K +KKD NAPKR LSAY F + R + +E P S +GK
Sbjct: 1 MPKAAKSRSGKAEKKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENP-GVSFGQVGKIL 59
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G++WK++S+ ++APY KA K YE +AY
Sbjct: 60 GERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 92
>gi|410057780|ref|XP_003954279.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Pan
troglodytes]
Length = 709
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + +YE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|343427271|emb|CBQ70799.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 519
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F+ R + F +
Sbjct: 420 RSAQRKAGKSRKGNLKDPNAPKKPLSAYFLFLRAIRADPNMTQAVFEGEQETTKQSVLAA 479
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYE 104
KW+S+SE EK PY+ +A KA YE
Sbjct: 480 AKWRSLSETEKQPYLDRAEADKARYE 505
>gi|297688746|ref|XP_002821837.1| PREDICTED: FACT complex subunit SSRP1 isoform 2 [Pongo abelii]
Length = 709
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + +YE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 104 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYITKAA 162
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 163 KLKEKYEKDVADYKSKGKFDGA 184
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K G+KKD NAPKRP S +FIF D R K P + + + K G++W ++++A K P
Sbjct: 83 KKGRKKDPNAPKRPSSGFFIFCADHRPKIKAQHP-SLGIGDVAKKLGEQWNNLTDATKQP 141
Query: 92 YVQKALNKKAEYELALEAYK 111
Y+ KA K +Y+ + YK
Sbjct: 142 YLIKANKLKDKYQKDVADYK 161
>gi|145541886|ref|XP_001456631.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424443|emb|CAK89234.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K++D NAPK+PL+ +F+F + +R+ + P+ K + + + G KW SMSE EK PYV
Sbjct: 44 KERDPNAPKKPLTPFFLFNQKYREKVVDRNPEIK-LTQISQMAGNKWSSMSEQEKKPYVD 102
Query: 95 KALNKKAEYELALEAYKKQLND----NGAGVSEDSWKSTSEV 132
+Y A E Y+++L D NG ++ K + +V
Sbjct: 103 -------QYNAAKEKYEQELKDYNEKNGIETNDKKRKKSEKV 137
>gi|4507241|ref|NP_003137.1| FACT complex subunit SSRP1 [Homo sapiens]
gi|397512296|ref|XP_003826485.1| PREDICTED: FACT complex subunit SSRP1 [Pan paniscus]
gi|426368405|ref|XP_004051198.1| PREDICTED: FACT complex subunit SSRP1 [Gorilla gorilla gorilla]
gi|730840|sp|Q08945.1|SSRP1_HUMAN RecName: Full=FACT complex subunit SSRP1; AltName:
Full=Chromatin-specific transcription elongation factor
80 kDa subunit; AltName: Full=Facilitates chromatin
transcription complex 80 kDa subunit; Short=FACT 80 kDa
subunit; Short=FACTp80; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; Short=hSSRP1; AltName: Full=T160
gi|184242|gb|AAA58660.1| high mobility group box [Homo sapiens]
gi|13477285|gb|AAH05116.1| Structure specific recognition protein 1 [Homo sapiens]
gi|119594140|gb|EAW73734.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|119594141|gb|EAW73735.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|123993967|gb|ABM84585.1| structure specific recognition protein 1 [synthetic construct]
gi|123998313|gb|ABM86758.1| structure specific recognition protein 1 [synthetic construct]
gi|410226712|gb|JAA10575.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410226714|gb|JAA10576.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262712|gb|JAA19322.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262714|gb|JAA19323.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305268|gb|JAA31234.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305270|gb|JAA31235.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351021|gb|JAA42114.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351025|gb|JAA42116.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 709
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + +YE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R++ +E P S +GK G++WK+++E ++APY
Sbjct: 18 KKKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKVLGERWKALNEKQRAPYEA 76
Query: 95 KALNKKAEYELALEAYKKQLNDN 117
KA K YE +Y Q D+
Sbjct: 77 KAAADKKRYEDEKASYNAQDEDD 99
>gi|332252411|ref|XP_003275348.1| PREDICTED: FACT complex subunit SSRP1 [Nomascus leucogenys]
Length = 709
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + +YE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 28 PKKEKAGKKK---DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
PK EK+ K+K D NAPKRPLSA+F F D R + ++ PD SV + K G++W +
Sbjct: 79 PKGEKSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNDV 137
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYK 111
+ K+ Y A KA YE L+AYK
Sbjct: 138 GDDTKSKYEGLAAKDKARYEKELKAYK 164
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFP-DNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+ P+ +SAY F++ R+ K+ P +N A K ++WK+MS+ EK + Q A
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 99 KKAEYELALEAYK 111
K ++ + YK
Sbjct: 65 DKKRFDSEMADYK 77
>gi|410351023|gb|JAA42115.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 712
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 528 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 584
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + +YE A++ Y+
Sbjct: 585 GEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 618
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 218
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 219 KLKEKYEKDVADYKSKGKFDGA 240
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K G+KKD NAPKRP S +FIF D R K P + + + K G++W ++++A K P
Sbjct: 83 KKGRKKDPNAPKRPPSGFFIFCADHRPKIKAQHP-SLGIGDVAKKLGEQWNNLTDATKQP 141
Query: 92 YVQKALNKKAEYELALEAYK 111
Y+ KA K +Y+ + YK
Sbjct: 142 YLIKANKLKDKYQKDVADYK 161
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P SV + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISVGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 163 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 221
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 222 KLKEKYEKDVADYKSKGKFDGA 243
>gi|332808386|ref|XP_513298.3| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4 [Pan
troglodytes]
Length = 186
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W ++++ EK PY Q+A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSTVTDLEKHPYEQRAA 147
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y LE Y+KQ N
Sbjct: 148 LLRAKYFEELELYRKQCN 165
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 28 PKKEKAGKKK---DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
PK EK+ K+K D NAPKRPLSA+F F D R + ++ PD SV + K G++W +
Sbjct: 79 PKGEKSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNDV 137
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYK 111
+ K+ Y A KA YE L+AYK
Sbjct: 138 GDDTKSKYEGLAAKDKARYEKELKAYK 164
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFP-DNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+ P+ +SAY F++ R+ K+ P +N A K ++WK+MSE EK + Q A
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADK 64
Query: 99 KKAEYELALEAYK 111
K ++ + YK
Sbjct: 65 DKKRFDSEMADYK 77
>gi|401626897|gb|EJS44815.1| nhp6bp [Saccharomyces arboricola H-6]
Length = 99
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK +KKD NAPKR LSAY F + R + PD + +G+ G++WK+++
Sbjct: 13 PKKRTTRRKKDPNAPKRGLSAYMFFANETRDIVRSENPDV-TFGQVGRILGERWKALTAE 71
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EK PY KA K YE E Y
Sbjct: 72 EKVPYESKAQADKKRYESEKELY 94
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R++ +E P S +GK G++WK+++E ++APY
Sbjct: 18 KKKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKVLGERWKALNEKQRAPYEA 76
Query: 95 KALNKKAEYELALEAYKKQLNDN 117
KA K YE +Y Q D+
Sbjct: 77 KAAADKKRYEDEKASYNAQDEDD 99
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F D R+ +E P S +GK G+KWK++SEA++ PY
Sbjct: 18 KKKDPNAPKRGLSAYMFFANDNREKVREENP-GISFGQVGKMLGEKWKALSEADRRPYED 76
Query: 95 KALNKKAEY 103
KA K Y
Sbjct: 77 KAAADKKRY 85
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR LSAY F +D+R K PD +GK G KWK + E EK PYV++
Sbjct: 25 KKDPNKPKRALSAYMFFSQDWRDRIKAENPDA-GFGEVGKLLGAKWKELDEEEKKPYVEQ 83
Query: 96 ALNKKAEYELALEAY 110
A K E A AY
Sbjct: 84 ASKDKTRAEEAKAAY 98
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 5 RVVAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFK-ES 63
R + +QKKP+ ++ K + K KK D + PKRP +AYF F+ +FRK+ K +
Sbjct: 102 RAMTASQKKPYDELAARDKQRYMEEISKFRKKADPDKPKRPQTAYFYFLAEFRKAMKAKG 161
Query: 64 FPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
+ K + ++ G+KW++M+ AEKA Y K Y+ ++AY+K+
Sbjct: 162 VIEGKKLTSLS---GEKWRAMTPAEKAKYEAMVTKDKERYQREMDAYRKK 208
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 43 KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAE 102
K+P SAY F R+ K+S + + K G +W++M+ ++K PY + A K
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQR 122
Query: 103 YELALEAYKKQLNDN 117
Y + ++K+ + +
Sbjct: 123 YMEEISKFRKKADPD 137
>gi|321476548|gb|EFX87508.1| hypothetical protein DAPPUDRAFT_306496 [Daphnia pulex]
Length = 191
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD NAPKR LSA+F F D R KE P+ ++ + K G++W +A KA Y KA
Sbjct: 97 KDPNAPKRSLSAFFWFCHDLRGHVKEQHPEY-TLGEIAKELGRRWGVSDDATKAQYAAKA 155
Query: 97 LNKKAEYELALEAYKK 112
+A YE + AYKK
Sbjct: 156 EQDRARYERDMNAYKK 171
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQ 94
K DSN P+ ++AY FM+ R+ K +PD V + +WK M+E +K +
Sbjct: 5 KGDSNKPRGRMTAYAYFMQTCREEHKNKYPDENVVFLEFSRRCAGQWKLMTENDKKRFQG 64
Query: 95 KALNKKAEYELALEAYKKQLNDNGAGV 121
A K +E + Y+ G G
Sbjct: 65 MAERDKLRFENEMRHYQPPQGATGRGT 91
>gi|444705434|gb|ELW46861.1| FACT complex subunit SSRP1 [Tupaia chinensis]
Length = 704
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
+ K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 520 IAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 576
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 577 GEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 610
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 28 PKKEKAGKKK---DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
PK +K+ K+K D NAPKRPLSA+F F D R + ++ PD+ SV + K G++W +
Sbjct: 79 PKGDKSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPDS-SVGEVAKELGRRWNEV 137
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYK 111
+ KA Y A KA YE L+AYK
Sbjct: 138 GDDVKAKYEGLAAKDKARYEKELKAYK 164
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+ P+ +SAY F++ R+ K+ P+ V A K ++WK+MS+ EK + Q A
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 99 KKAEYELALEAYKKQLND 116
K ++ + YK D
Sbjct: 65 DKKRFDTEMADYKPPKGD 82
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 184 KLKEKYEKDVADYKSKGKFDGA 205
>gi|297665615|ref|XP_002811141.1| PREDICTED: high mobility group protein B4 [Pongo abelii]
Length = 189
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 30 KEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
K K +K+D AP+RP S++ +F +D K P N SV + KA G+ W + ++ EK
Sbjct: 81 KTKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSAATDLEK 139
Query: 90 APYVQKALNKKAEYELALEAYKKQ 113
PY Q+A +A+Y LE Y+KQ
Sbjct: 140 HPYEQRAALLRAKYFEELELYRKQ 163
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFEEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|397482786|ref|XP_003812597.1| PREDICTED: high mobility group protein B4 [Pan paniscus]
Length = 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W ++++ EK PY Q+A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSTVTDLEKHPYEQRAA 147
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y LE Y+KQ N
Sbjct: 148 LLRAKYFEELELYRKQCN 165
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYE 104
A Y+
Sbjct: 69 ARYQ 72
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 184 KLKEKYEKDVADYKSKGKFDGA 205
>gi|60552474|gb|AAH91486.1| SSRP1 protein, partial [Homo sapiens]
Length = 633
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPVEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + +YE A++ Y+
Sbjct: 582 GEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
>gi|116517272|ref|NP_001070857.1| transcription factor A, mitochondrial [Danio rerio]
gi|115528122|gb|AAI24668.1| Zgc:153358 [Danio rerio]
gi|182890840|gb|AAI65544.1| Zgc:153358 protein [Danio rerio]
Length = 277
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRPL+AY F++D + + + P KSV M K Q+WK ++ +K P+ +L K
Sbjct: 47 PKRPLTAYMTFVKDMQPTVSKQNPSIKSVDVMRKIA-QQWKMLTTEQKQPFQVASLEAKE 105
Query: 102 EYELALEAYKKQLN 115
+Y+LALE +K QL
Sbjct: 106 QYKLALEKFKAQLT 119
>gi|405963576|gb|EKC29138.1| FACT complex subunit SSRP1 [Crassostrea gigas]
Length = 757
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SAYF++ R+ K+ PD S+ + K G+ WK M + +K + +KA
Sbjct: 556 DPNAPKRPQSAYFLWFNANREELKKDTPD-ISITDLSKKAGEVWKQMEDTDKTEWNEKAA 614
Query: 98 NKKAEYELALEAYK 111
K EYE A+E YK
Sbjct: 615 EAKKEYEKAMEEYK 628
>gi|71005742|ref|XP_757537.1| hypothetical protein UM01390.1 [Ustilago maydis 521]
gi|46096660|gb|EAK81893.1| hypothetical protein UM01390.1 [Ustilago maydis 521]
Length = 517
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F+ R + F +
Sbjct: 418 RSAQRKAGKSRKGNLKDPNAPKKPLSAYFLFLRAIRADPNMTQAVFEGEQETTKQSVLAA 477
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYE 104
KW+S+SE EK PY+ +A KA YE
Sbjct: 478 AKWRSLSEIEKQPYLDRAEADKARYE 503
>gi|388852006|emb|CCF54362.1| uncharacterized protein [Ustilago hordei]
Length = 515
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F+ R + F +
Sbjct: 416 RSAQRKAGKSRKGNLKDPNAPKKPLSAYFLFLRAIRADPNMTQAVFEGEQETTKQSVLAA 475
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYE 104
KW+S+SE EK PY+ +A KA YE
Sbjct: 476 AKWRSLSEPEKQPYLDRAEADKARYE 501
>gi|348556930|ref|XP_003464273.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 709
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 16 ADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
A M K RK+ K + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 523 AKMTKDRKSRKKTVEAKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSK 579
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 580 KAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|238576322|ref|XP_002387994.1| hypothetical protein MPER_13045 [Moniliophthora perniciosa FA553]
gi|215448913|gb|EEB88924.1| hypothetical protein MPER_13045 [Moniliophthora perniciosa FA553]
Length = 215
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F +D+R K PD A+ GK G KWK + E EK PYV++
Sbjct: 120 KKDPNAPKRALSAYMFFSQDWRDRIKTENPD----ASFGKLLGAKWKELDEEEKKPYVEQ 175
Query: 96 A 96
A
Sbjct: 176 A 176
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A K++ K EK KKD NAPKR LSAY F + R++ +E P S +GK G++
Sbjct: 5 AAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENP-GVSFGQVGKILGER 63
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAY 110
WK++S+ ++APY KA K YE +AY
Sbjct: 64 WKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PYV KA
Sbjct: 95 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAA 153
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 154 KLKEKYEKDVADYKSKGKFDGA 175
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PYV KA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAA 167
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 168 KLKEKYEKDVADYKSKGKFDGA 189
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PYV KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|349576469|dbj|GAA21640.1| K7_Nhp6bp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 99
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK +KKD NAPKR LSAY F + R + PD + +G+ G+KWK+++
Sbjct: 13 PKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGEKWKALTAE 71
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EK PY KA K YE E Y
Sbjct: 72 EKQPYESKAQADKKRYESEKELY 94
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|111154063|ref|NP_892035.2| FACT complex subunit SSRP1 [Mus musculus]
gi|209862973|ref|NP_001129553.1| FACT complex subunit SSRP1 [Mus musculus]
gi|110283006|sp|Q08943.2|SSRP1_MOUSE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|74138726|dbj|BAE27178.1| unnamed protein product [Mus musculus]
gi|74144584|dbj|BAE27280.1| unnamed protein product [Mus musculus]
gi|74144625|dbj|BAE27299.1| unnamed protein product [Mus musculus]
gi|74177273|dbj|BAE34555.1| unnamed protein product [Mus musculus]
Length = 708
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 16 ADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
A M K RK+ K + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 523 AKMAKDRKSRRKSSEAKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSK 579
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 580 KAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PYV KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|345780695|ref|XP_851529.2| PREDICTED: high mobility group protein B4 [Canis lupus familiaris]
Length = 193
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ IF +D K P SV + KA G+ W S AEK PY Q+A
Sbjct: 91 DPQAPRRPPSSFLIFCQDHYAQLKRENP-TWSVVQVAKASGRMWSVTSGAEKQPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQLN 115
+A Y+ LE Y++Q N
Sbjct: 150 VLRARYQEELEVYRQQRN 167
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDN-KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 11 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 71 ARYQEEMMNY 80
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A K++ K EK KKD NAPKR LSAY F + R++ +E P S +GK G++
Sbjct: 5 AAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENP-GVSFGQVGKILGER 63
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAY 110
WK++S+ ++APY KA K YE +AY
Sbjct: 64 WKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPKR LS+Y F ++ R PD + VAA+GK G W S+ E+EKAPY +
Sbjct: 17 KKDPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNSLDESEKAPYEK 76
Query: 95 KALNKKAEYELALEAYKK 112
A +A YE AY K
Sbjct: 77 LAEADRARYEKEKAAYNK 94
>gi|391638|dbj|BAA03261.1| ORF1 [Gallus gallus]
Length = 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 10 AQKKP--HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
+KKP A ++K RK K + K GK D NAPKRP+SAY +++ R+ K P
Sbjct: 102 GEKKPAKKAKIVKDRKPRKKQVESKKGK--DPNAPKRPMSAYMLWLNANREKIKSDHP-G 158
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
S+ + K G+ WK+MS+ +K + +KA + K +YE A++ Y
Sbjct: 159 ISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 201
>gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musculus]
Length = 711
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 16 ADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
A M K RK+ K + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 523 AKMAKDRKSRRKSSEAKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSK 579
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 580 KAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|406698555|gb|EKD01790.1| protein HMG1 [Trichosporon asahii var. asahii CBS 8904]
Length = 779
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS--------FKESFPDNKSVAAM 73
R + K K + G KD NAPK+PLSAYF+F++ R++ ES +SV A
Sbjct: 541 RTQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKGIRENDDLKRQVWGAESETTRQSVLAA 600
Query: 74 GKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
++W+ +S+ EK PY+Q+A K EYE + Y++
Sbjct: 601 -----ERWRGLSDDEKRPYLQQAEKDKQEYEHLRKIYEE 634
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K + KD NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK P
Sbjct: 83 KGKRNKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDIAKKLGEMWNNLSDGEKQP 141
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGA 119
Y KA K +YE + YK + +GA
Sbjct: 142 YNNKAAKLKEKYEKDVADYKSKGKFDGA 169
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPKR LS+Y F ++ R PD + VAA+GK G W S+ E+EKAPY +
Sbjct: 17 KKDPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNSLDESEKAPYEK 76
Query: 95 KALNKKAEYELALEAYKK 112
A +A YE AY K
Sbjct: 77 LAEADRARYEKEKAAYNK 94
>gi|335308835|ref|XP_003361389.1| PREDICTED: high mobility group protein B4-like [Sus scrofa]
Length = 198
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
+K+D AP+RP S++ +F +D K P N SVA + KA + W + ++ +K PY Q
Sbjct: 88 RKRDPQAPRRPPSSFLLFCQDNYAQLKRENP-NWSVAQVAKASARMWSTTTDVDKQPYEQ 146
Query: 95 KALNKKAEYELALEAYKKQLN 115
+A +A+Y L Y+KQ N
Sbjct: 147 RAALLRAKYHEELSVYQKQFN 167
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R++ +E P S +GK G++WK++S+ ++APY +
Sbjct: 18 KKKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALSDKQRAPYEE 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAAADKKRYE 86
>gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.]
Length = 708
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 16 ADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
A M K RK+ K + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 523 AKMAKDRKSRRKSSEAKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSK 579
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 580 KAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|354488105|ref|XP_003506211.1| PREDICTED: FACT complex subunit SSRP1-like isoform 1 [Cricetulus
griseus]
gi|354488107|ref|XP_003506212.1| PREDICTED: FACT complex subunit SSRP1-like isoform 2 [Cricetulus
griseus]
gi|344253527|gb|EGW09631.1| FACT complex subunit SSRP1 [Cricetulus griseus]
Length = 709
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 16 ADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
A M K RK+ K + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 523 AKMAKDRKSRKKSSEAKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSK 579
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 580 KAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|401886602|gb|EJT50629.1| protein HMG1 [Trichosporon asahii var. asahii CBS 2479]
Length = 762
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS--------FKESFPDNKSVAAM 73
R + K K + G KD NAPK+PLSAYF+F++ R++ ES +SV A
Sbjct: 524 RTQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKGIRENDDLKRQVWGAESETTRQSVLAA 583
Query: 74 GKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
++W+ +S+ EK PY+Q+A K EYE + Y++
Sbjct: 584 -----ERWRGLSDDEKRPYLQQAEKDKQEYEHLRKIYEE 617
>gi|302652822|ref|XP_003018251.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
gi|291181876|gb|EFE37606.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
Length = 132
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY IF + R + +E P N + +GK G++WK++S+ ++ PY +KA
Sbjct: 60 DPNAPKRGLSAYMIFANEQRAAVREENP-NITFGQVGKVLGERWKALSDKQRVPYEEKAA 118
Query: 98 NKKAEYELALEAY 110
K YE AY
Sbjct: 119 TDKQRYEDEKAAY 131
>gi|50304233|ref|XP_452066.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636989|sp|Q6CVH3.1|NHP6_KLULA RecName: Full=Non-histone chromosomal protein 6
gi|49641198|emb|CAH02459.1| KLLA0B12056p [Kluyveromyces lactis]
Length = 93
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+K+ KKKD NAPKR LSAY F + R + P + +G+ G+KWK+++E
Sbjct: 4 PRKKTQRKKKDPNAPKRALSAYMFFANENRDIVRAENP-GITFGQVGRILGEKWKALNED 62
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EKAPY KA K YE E Y
Sbjct: 63 EKAPYEAKAEADKKRYESEKELY 85
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 28 PKKEKAGK-KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
PK K GK KKD NAPKRP SA+F+F D R K P S+ + K G+ W +
Sbjct: 81 PKGTKVGKRKKDPNAPKRPPSAFFVFCSDHRARIKGEHP-GISIGDIAKKLGELWSKQTP 139
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGA 119
+K PY KA K +YE + AY+ + G
Sbjct: 140 KDKVPYEAKAGKLKEKYEKDVAAYRAKSGAGGG 172
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK +KKD NAPKR LSAY F + R + PD + +G+ G++WK+++
Sbjct: 13 PKKRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKALTAE 71
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EK PY KA K YE E Y
Sbjct: 72 EKQPYESKAQADKKRYESEKELY 94
>gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus musculus]
Length = 633
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 16 ADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
A M K RK+ K + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 523 AKMAKDRKSRRKSSEAKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSK 579
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK MS+ +K + +KA + + EYE A++ Y+
Sbjct: 580 KAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYE 615
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP+ EK KKKD NAPKR LSAY F ++ R + +E P S +GK G++WK++++
Sbjct: 12 KPRGEK--KKKDPNAPKRGLSAYMFFAQEQRDNVREENP-GISFGQVGKVLGERWKALND 68
Query: 87 AEKAPYVQKALNKKAEYE 104
++ PY KA K YE
Sbjct: 69 KQRTPYETKAQEDKKRYE 86
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A K++ K EK KKD NAPKR LSAY F + R++ +E P + +GK G++
Sbjct: 5 AAKSKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENP-GVTFGQVGKILGER 63
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAY 110
WK++S+ ++APY KA K YE +AY
Sbjct: 64 WKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|256080078|ref|XP_002576310.1| structure specific recognition protein [Schistosoma mansoni]
gi|350646026|emb|CCD59303.1| structure specific recognition protein,putative [Schistosoma
mansoni]
Length = 632
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K +K + +K K KD NAP RPLSAYF++ + R+ ++ SVA + KA G+ W+
Sbjct: 527 KQPSKRQTKKQKKPKDPNAPTRPLSAYFLWFNENREKIAKNLGGQNSVAEVAKAAGEIWR 586
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDN 117
+M K+ Y + K +Y+ L Y+ L N
Sbjct: 587 NMDSTAKSSYQSRVDELKKKYQEDLRIYQSNLGSN 621
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 130 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYMTKAA 188
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 189 KLKEKYEKDVADYKSKGKFDGA 210
>gi|339046261|ref|NP_009647.2| Nhp6bp [Saccharomyces cerevisiae S288c]
gi|341942236|sp|P11633.3|NHP6B_YEAST RecName: Full=Non-histone chromosomal protein 6B
gi|4036|emb|CAA33378.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45271022|gb|AAS56892.1| YBR089C-A [Saccharomyces cerevisiae]
gi|151946484|gb|EDN64706.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190408749|gb|EDV12014.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256274037|gb|EEU08951.1| Nhp6bp [Saccharomyces cerevisiae JAY291]
gi|290878106|emb|CBK39165.1| Nhp6bp [Saccharomyces cerevisiae EC1118]
gi|333454471|tpg|DAA07210.2| TPA: Nhp6bp [Saccharomyces cerevisiae S288c]
Length = 99
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK +KKD NAPKR LSAY F + R + PD + +G+ G++WK+++
Sbjct: 13 PKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKALTAE 71
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EK PY KA K YE E Y
Sbjct: 72 EKQPYESKAQADKKRYESEKELY 94
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+ EK + KD NAPKRP SA+FIF ++R KE P S+ + K G+ W S
Sbjct: 61 PRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETP-GLSIGDVAKKLGEMWNKTSAE 119
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQLNDNGAG 120
EK PY +KA K +YE + AY+K GA
Sbjct: 120 EKQPYEKKAAKLKEKYEKDIAAYRKGKVVGGAA 152
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|320585897|gb|EFW98576.1| nucleosome-binding protein [Grosmannia clavigera kw1407]
Length = 94
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M+KA K EK KKD NAPKR LSAY F + R++ ++ P S +GK
Sbjct: 1 MVKAATKVKTGKVEKRRSKKDPNAPKRGLSAYMFFANEQRENVRDENP-GISFGQVGKIL 59
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G++WK+++E ++ PY KA K YE A AY
Sbjct: 60 GERWKALNEKQRTPYEAKAAADKKRYEDAKAAY 92
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
+KKD NAPKR LSAY F D R+ +E P S +GK G++WK++S+ ++ PY +
Sbjct: 18 RKKDPNAPKRGLSAYMFFANDNREKVREENP-GISFGQVGKMLGERWKALSDTDRRPYEE 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAAADKKRYE 86
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|353239816|emb|CCA71712.1| hypothetical protein PIIN_05647 [Piriformospora indica DSM 11827]
Length = 781
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 20 KARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR---KSFKESFPDNKSVAAMGKA 76
K R A+ K + KD NAPK+PLSAYF+F+ R + +E F
Sbjct: 533 KFRAAQRKAGLSRRANIKDPNAPKKPLSAYFMFLAKIRSDPRLVEEVFGGETETTRQSVL 592
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGA 119
Q W+ MS+ EK P++ +A + K +YE + Y++Q + A
Sbjct: 593 AAQTWREMSDEEKKPFLTQAEHDKIQYEALRKIYEEQAGSSSA 635
>gi|326920276|ref|XP_003206400.1| PREDICTED: FACT complex subunit SSRP1-like [Meleagris gallopavo]
Length = 706
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 10 AQKKP--HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
+KKP A ++K RK K + K GK D NAPKRP+SAY +++ R+ K P
Sbjct: 513 GEKKPAKKAKIVKDRKPRKKQVESKKGK--DPNAPKRPMSAYMLWLNANREKIKSDHP-G 569
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
S+ + K G+ WK+MS+ +K + +KA + K +YE A++ Y
Sbjct: 570 ISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|218117885|dbj|BAH03305.1| structure-specific recognition protein 1 [Gallus gallus]
Length = 706
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 10 AQKKP--HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
+KKP A ++K RK K + K GK D NAPKRP+SAY +++ R+ K P
Sbjct: 513 GEKKPAKKAKIVKDRKPRKKQVESKKGK--DPNAPKRPMSAYMLWLNANREKIKSDHP-G 569
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
S+ + K G+ WK+MS+ +K + +KA + K +YE A++ Y
Sbjct: 570 ISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
+KKD NAPKR LSAY F D R+ +E P S +GK G++WK++S+ ++ PY +
Sbjct: 19 RKKDPNAPKRGLSAYMFFANDNREKVREENP-GISFGQVGKMLGERWKALSDTDRRPYEE 77
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 78 KAAADKKRYE 87
>gi|57524786|ref|NP_001005796.1| FACT complex subunit SSRP1 [Gallus gallus]
gi|110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53128417|emb|CAG31300.1| hypothetical protein RCJMB04_4n20 [Gallus gallus]
Length = 706
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 10 AQKKP--HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
+KKP A ++K RK K + K GK D NAPKRP+SAY +++ R+ K P
Sbjct: 513 GEKKPAKKAKIVKDRKPRKKQVESKKGK--DPNAPKRPMSAYMLWLNANREKIKSDHP-G 569
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
S+ + K G+ WK+MS+ +K + +KA + K +YE A++ Y
Sbjct: 570 ISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK++++ ++APY K
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKILGERWKALNDKQRAPYEAK 78
Query: 96 ALNKKAEYELALEAY 110
A K YE +AY
Sbjct: 79 AATDKKRYEDEKQAY 93
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 167
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 168 KLKEKYEKDVADYKSKGKFDGA 189
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 14 PHADMLKARKAENKPK------KEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
P ++K KA+ K K K KKD +APKRPLSAY F +D R+ K + P+
Sbjct: 20 PARAIVKMAKADTKTKSSTSTQKRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPE- 78
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPY 92
+G+ G KWK MSEAEK PY
Sbjct: 79 AGFGEVGRLLGAKWKEMSEAEKKPY 103
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F D R KE P S+ + K G+ W + S +KAPY KA
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNP-GISIGDIAKKLGELWATQSAKDKAPYEAKAA 172
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSED 124
K +YE + AY+ + G+G S++
Sbjct: 173 KLKEKYEKDVAAYRAK---GGSGKSDE 196
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD N P+ SAY F+ R+ K+ P + A K ++WK+MS EK + +
Sbjct: 26 KDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDEL 85
Query: 96 ALNKKAEYELALEAY 110
A KA Y+ ++ Y
Sbjct: 86 AKTDKARYDREMKTY 100
>gi|115459940|ref|NP_001053570.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|38345400|emb|CAE03091.2| OSJNBa0017B10.6 [Oryza sativa Japonica Group]
gi|113565141|dbj|BAF15484.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|116309704|emb|CAH66751.1| H0409D10.9 [Oryza sativa Indica Group]
gi|116309707|emb|CAH66753.1| OSIGBa0158F05.2 [Oryza sativa Indica Group]
gi|125549359|gb|EAY95181.1| hypothetical protein OsI_16998 [Oryza sativa Indica Group]
gi|149391231|gb|ABR25633.1| hmg1/2-like protein [Oryza sativa Indica Group]
gi|213959192|gb|ACJ54930.1| HMG protein [Oryza sativa Japonica Group]
gi|215767864|dbj|BAH00093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629376|gb|EEE61508.1| hypothetical protein OsJ_15798 [Oryza sativa Japonica Group]
gi|323388963|gb|ADX60286.1| HMG transcription factor [Oryza sativa Japonica Group]
Length = 132
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 33 AGKKKDSNA---PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
AGK+K + PKR L+ +F F+ +FR + E P+ K VAA+ KA G+KW++MS+ EK
Sbjct: 13 AGKRKKAGGAGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEK 72
Query: 90 APYVQK 95
A Y K
Sbjct: 73 AQYGGK 78
>gi|393236123|gb|EJD43674.1| hypothetical protein AURDEDRAFT_114700 [Auricularia delicata
TFB-10046 SS5]
Length = 125
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 26 NKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
+KPKKEK PKR LSAY F++D+R+ KE PD + +GK G KWK MS
Sbjct: 17 DKPKKEKK-----EAGPKRALSAYMFFVKDWRERIKEENPDA-AFGEIGKLMGAKWKEMS 70
Query: 86 EAEKAPYVQKALNKKAEYE 104
+ +K PYV++A K E
Sbjct: 71 DEDKQPYVEQAEEDKVRAE 89
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYITKAA 98
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 99 KLKEKYEKDVADYKSKGKFDGA 120
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
Length = 94
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK +KKD NAPKR LSAY F + R + PD + +GK G++WK++S E
Sbjct: 8 KKRSTRRKKDPNAPKRALSAYMFFANETRDIVRSENPDV-TFGQVGKILGERWKALSAEE 66
Query: 89 KAPYVQKALNKKAEYELALEAY 110
K PY KA K YE E Y
Sbjct: 67 KVPYETKAEADKKRYESEKELY 88
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E + KD NAPKRP SA+F+F DFR K P + ++ + K G+ W + +
Sbjct: 80 PKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATD 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY ++A K +YE + AY+
Sbjct: 139 DKLPYERRAAKLKEKYEKDVAAYR 162
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E + KD NAPKRP SA+F+F DFR K P + ++ + K G+ W + +
Sbjct: 80 PKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATD 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY ++A K +YE + AY+
Sbjct: 139 DKLPYERRAAKLKEKYEKDVAAYR 162
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R +E P S +GK G++WK++S++E+ PY +
Sbjct: 18 KKKDPNAPKRGLSAYMFFANENRDKVREENP-GISFGQVGKMLGERWKALSDSERRPYEE 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAAADKKRYE 86
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KDSNAPK P S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 88 KDSNAPKHPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYNNKA 146
Query: 97 LNKKAEYELALEAYKKQLN-DNGAGVSEDSWKST 129
K +YE + K ++ D+ G ++ SWK
Sbjct: 147 AKLKEKYEKDVADNKSKIKFDSVKGTAKASWKXV 180
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK+++E ++APY K
Sbjct: 18 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNEKQRAPYEAK 76
Query: 96 ALNKKAEYELALEAY 110
A K YE +AY
Sbjct: 77 AAADKKRYEDEKQAY 91
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK+++E ++APY K
Sbjct: 18 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNEKQRAPYEAK 76
Query: 96 ALNKKAEYELALEAY 110
A K YE +AY
Sbjct: 77 AAADKKRYEDEKQAY 91
>gi|425767422|gb|EKV05996.1| Non-histone chromosomal protein 6 [Penicillium digitatum PHI26]
gi|425779648|gb|EKV17689.1| Non-histone chromosomal protein 6 [Penicillium digitatum Pd1]
Length = 189
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+K +KKD NAPKR LSAY F D R +E P S +GK G KWK++SE
Sbjct: 95 PEKRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENP-GISFGQVGKQLGDKWKALSET 153
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
++ PY KA K YE AY
Sbjct: 154 DRKPYDAKAAADKKRYEEEKAAY 176
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK+++E ++APY K
Sbjct: 19 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNEKQRAPYEAK 77
Query: 96 ALNKKAEYELALEAY 110
A K YE +AY
Sbjct: 78 AAADKKRYEDEKQAY 92
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYMTKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK+++E ++ PY K
Sbjct: 19 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNEKQRGPYEAK 77
Query: 96 ALNKKAEYELALEAYKKQLNDN 117
A+ K YE AY + D+
Sbjct: 78 AVADKKRYEDEKAAYNAEAEDD 99
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PK+P +AY +++ + R KE FPD K V + K G+ WK+M E +K PY KA
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDMK-VTEVAKKAGENWKAMGEEDKKPYQDKAD 154
Query: 98 NKKAEYELALEAY 110
K ++ ++ Y
Sbjct: 155 KAKETWKTEMKKY 167
>gi|402078687|gb|EJT73952.1| high mobility group protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 323
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 22/128 (17%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKKE+ + D NAPKRPL+ YF++M+ R + + A+ + G ++W +MS+A
Sbjct: 102 PKKERKKRHHDPNAPKRPLTPYFLYMQTARPIIAADLGSDAAKGAVQEEGQRRWGTMSQA 161
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAE 147
EKA + Q Y+ L Y +++ S+K G + E++DE
Sbjct: 162 EKAGWDQ-------AYQYNLRLYNARVH---------SYK------HGNPGAKEMSDEDA 199
Query: 148 QEFSSQVS 155
Q+++ Q S
Sbjct: 200 QQYAEQHS 207
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K ENK + +K KD NAPKR LSA+F F D R K P+ V + K G+KW
Sbjct: 184 KGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWS 242
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEI 142
K+ Y A KA YE + AYKK++ ++GA + V +++ + I
Sbjct: 243 DADPETKSKYEAMAEKDKARYEREMTAYKKKMQNDGAPM----------VGGAQANQTTI 292
Query: 143 NDEAEQEF 150
++E+E+
Sbjct: 293 KSDSEEEW 300
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQK 95
KDS P+ ++AY F++ R+ K+ P+ K V K +WK+MS+ EK + +
Sbjct: 107 KDSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEM 165
Query: 96 ALNKKAEYELALEAYKKQLNDN 117
A K Y+ ++ Y +N
Sbjct: 166 AEKDKKRYDTEMQNYTPPKGEN 187
>gi|392300930|gb|EIW12019.1| Nhp6bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 162
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK +KKD NAPKR LSAY F + R + PD + +G+ G++WK+++
Sbjct: 76 PKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPD-VTFGQVGRILGERWKALTAE 134
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EK PY KA K YE E Y
Sbjct: 135 EKQPYESKAQADKKRYESEKELY 157
>gi|297813579|ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
gi|297320510|gb|EFH50932.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK P+SAY I+ + R + K +NKSV + K G++WK++SE +KAPY Q A
Sbjct: 244 DPLKPKHPISAYLIYANERRAALK---GENKSVIEVAKMTGEEWKNLSEEQKAPYDQMAK 300
Query: 98 NKKAEYELALEAYK 111
KK Y +E YK
Sbjct: 301 KKKEIYLQEMEGYK 314
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 13/112 (11%)
Query: 7 VAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP- 65
+ + +KK D + +K + K +K +K D N PK+P S+YF+F ++ RKS E P
Sbjct: 340 LQLLKKKEKTDNI-IKKTKEMTKNKKKNEKVDPNKPKKPASSYFLFCKEARKSVLEEHPG 398
Query: 66 -DNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+N +V A KWK + E EK Y KA AE +EAYKK++ +
Sbjct: 399 INNSTVTA---HISLKWKELGEEEKQVYNGKA----AEL---MEAYKKEVEE 440
>gi|213959194|gb|ACJ54931.1| HMG protein [Oryza sativa Japonica Group]
Length = 131
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 33 AGKKKDSNA---PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
AGK+K + PKR L+ +F F+ +FR + E P+ K VAA+ KA G+KW++MS+ EK
Sbjct: 13 AGKRKKAGGAGKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEK 72
Query: 90 APYVQK 95
A Y K
Sbjct: 73 AQYGGK 78
>gi|242064692|ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
+P+SAYF++ ++ R + + K+V +GK G++WK+M+EA+KAPY + A +K EY
Sbjct: 290 QPMSAYFVYSQERRAAL---VAEKKNVPEIGKITGEEWKNMTEAQKAPYEKVARKQKEEY 346
Query: 104 ELALEAYKKQLNDNGAGV 121
+ +E YK++ + A +
Sbjct: 347 QKQMEVYKQKKIEEAASL 364
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 7 VAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP- 65
+ + +KK AD + + EN+ KK++ D N PKRP S++ +F ++ RK E P
Sbjct: 380 LQLLKKKEKADNIIKKTKENRQKKKQENA--DPNRPKRPASSFLLFSKEARKQLLEERPG 437
Query: 66 -DNKSVAAMGKAGGQKWKSMSEAEKAPY 92
+N S+ A+ KWK +S E+ +
Sbjct: 438 INNSSLNALISV---KWKELSGEERQAW 462
>gi|47124491|gb|AAH70148.1| High-mobility group box 4 [Homo sapiens]
Length = 112
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++ EK PY Q+
Sbjct: 15 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSTATDLEKHPYEQRVA 73
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y LE Y+KQ N
Sbjct: 74 LLRAKYFEELELYRKQCN 91
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K ENK + +K KD NAPKR LSA+F F D R K P+ V + K G+KW
Sbjct: 185 KGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWS 243
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV-------------SEDSWKST 129
K+ Y A KA YE + AYKK++ ++GA + SE+ WK
Sbjct: 244 DADPETKSKYEAMAEKDKARYEREMTAYKKKIQNDGAPMMGGAPANQTVKSDSEEEWKED 303
Query: 130 SE 131
E
Sbjct: 304 DE 305
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQK 95
KDS P+ ++AY F++ R+ K+ P+ K V K +WK+MS+ EK + +
Sbjct: 108 KDSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEM 166
Query: 96 ALNKKAEYELALEAYKKQLNDN 117
A K Y+ ++ Y +N
Sbjct: 167 AEKDKKRYDAEMQNYTPPKGEN 188
>gi|449272347|gb|EMC82325.1| FACT complex subunit SSRP1 [Columba livia]
Length = 704
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 11 QKKP--HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
+KKP A ++K RK K + K GK D NAPKRP+SAY +++ R+ K P
Sbjct: 514 EKKPAKKAKLVKDRKPRKKQPESKKGK--DPNAPKRPMSAYMLWLNASRERIKSDHP-GI 570
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
S+ + K G+ WK+MS+ +K + +KA + + +YE A++ Y
Sbjct: 571 SITDLSKKAGELWKAMSKEKKEEWDRKAEDARRDYEKAMKEY 612
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R + +E P S +GK G++WK+++E ++APY
Sbjct: 19 KKKDPNAPKRGLSAYMFFANEQRDNVREENP-GISFGQVGKVLGERWKALNEKQRAPYEA 77
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 78 KAAADKKRYE 87
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
K EK KKD NAPKR LSAY F + R++ +E P S +GK G++WK++++ +
Sbjct: 13 KVEKKRGKKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKILGERWKALNDKQ 71
Query: 89 KAPYVQKALNKKAEYELALEAY 110
+APY KA K YE +AY
Sbjct: 72 RAPYEAKAAADKKRYEDEKQAY 93
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP SA+F+F ++R K P S+ K G+ W S +K PY Q
Sbjct: 2 KKKDPNAPKRPPSAFFLFCSEYRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQ 60
Query: 95 KALNKKAEYELALEAYK 111
KA K +YE + AY+
Sbjct: 61 KAAKLKEKYEKDIAAYR 77
>gi|410966739|ref|XP_003989887.1| PREDICTED: high mobility group protein B4 [Felis catus]
Length = 193
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + + AEK PY Q+A
Sbjct: 91 DPYAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKASGKMWSATTGAEKQPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQLNDN 117
+A+Y+ LE Y+KQ N
Sbjct: 150 LLRAKYQEDLEIYRKQRKAN 169
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ S + +KW+S+S+ EKA Y A K
Sbjct: 11 PKANVSSYIHFLLNYRNKFKEQQPNTYLSFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 71 ARYQEEMMNY 80
>gi|365762037|gb|EHN03653.1| Nhp6bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841847|gb|EJT44170.1| NHP6B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 102
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK +KKD NAPKR LSAY F + R + PD + +G+ G+KWK+++
Sbjct: 16 PKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGEKWKALTAE 74
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
+K PY KA K YE E Y
Sbjct: 75 DKQPYESKAQADKKRYESEKELY 97
>gi|443897570|dbj|GAC74910.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 280
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D PKRP SA+F F+ D R S ES N + K GG++WK M+ +KAPY Q+A
Sbjct: 203 RDPAKPKRPNSAFFEFLNDLRAS--ESVIPN--ITEFSKRGGERWKQMTPDQKAPYEQRA 258
Query: 97 LNKKAEYELALEAY 110
L +Y+ LE Y
Sbjct: 259 LQALEQYKRDLEVY 272
>gi|321249260|ref|XP_003191397.1| protein HMG1 [Cryptococcus gattii WM276]
gi|317457864|gb|ADV19610.1| HMG1, putative [Cryptococcus gattii WM276]
Length = 926
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS--------FKESFPDNKSVAAM 73
R + K K + G KD NAPK+PLSAYF+F++ R++ E+ +SV A
Sbjct: 557 RAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKAIRENSDIRAQVWGTEAETTKQSVMAA 616
Query: 74 GKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
+KW+S+++ EK PY+++A + K YE A + Y++
Sbjct: 617 -----EKWRSLTDDEKRPYLEQAEHDKQTYETARKQYEE 650
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R + +E P S +GK G++WK+++E ++APY
Sbjct: 17 KKKDPNAPKRGLSAYMFFANEQRDNVREENP-GISFGQVGKVLGERWKALNEKQRAPYEA 75
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 76 KAAADKKRYE 85
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R + +E P S +GK G++WK+++E ++APY
Sbjct: 19 KKKDPNAPKRGLSAYMFFANEQRDNVREENP-GISFGQVGKVLGERWKALNEKQRAPYEA 77
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 78 KAAADKKRYE 87
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK +K + KD NAPKRP SA+F+F DFR K +P S+ K G+ W S S
Sbjct: 80 PKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSEYP-GLSIGDTAKKLGEMWNSSSAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + AY+
Sbjct: 139 EKQPYEKKAAKLKEKYDKDIVAYR 162
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 96 ALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 AKQDKLRYEREMKNY 77
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVPKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP SA+FIF DFR K P + + K G+ W + KAPY
Sbjct: 92 KKKDPNAPKRPPSAFFIFCADFRPQIKADNP-GMVIGTIAKRLGEMWGRQTNENKAPYEH 150
Query: 95 KALNKKAEYELALEAYKK 112
KA K +Y+ + AY++
Sbjct: 151 KANILKEKYKKDVAAYQR 168
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F D R KE P S+ + K G+ W + S +KAPY KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNP-GISIGDIAKKLGEMWATQSAKDKAPYEAKAA 149
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 150 RLKEKYEKDVAAYR 163
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD N P+ S+Y F+ R+ K+ P + A K ++WK+MS EK + +
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEM 62
Query: 96 ALNKKAEYELALEAY 110
A N K Y+ ++ Y
Sbjct: 63 AKNDKVRYDREMKTY 77
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK+P+SA+F+F + R S +NK+V + K G++WK+M+E +K PY + A
Sbjct: 307 DPLKPKQPMSAFFLFSNERRASL---LAENKNVREVAKIAGEQWKNMTEEQKGPYEEMAK 363
Query: 98 NKKAEYELALEAYKKQLNDNGAGV 121
K Y +EAYK++ ++ +
Sbjct: 364 RNKLRYMQEMEAYKQKKDEEAMNL 387
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 15/121 (12%)
Query: 7 VAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP- 65
+ + +KK D + + EN+ KK++ D N PK+P S++ IF ++ RK+ + P
Sbjct: 403 LQLLKKKEKTDNMIKKTKENRQKKKQQNV--DPNKPKKPASSFLIFSKEARKNLAQERPV 460
Query: 66 -DNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND-NGAGVSE 123
+N ++ A+ KWK +SE E+ + KA AE A+E YKK++ + N +
Sbjct: 461 INNSTLNALISV---KWKELSEEERQIWNAKA----AE---AMEIYKKEMEEYNKTAATS 510
Query: 124 D 124
D
Sbjct: 511 D 511
>gi|299741148|ref|XP_001834261.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
gi|298404577|gb|EAU87573.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
Length = 184
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A KAE P+ + KKD PKR LSAY F +D+R+ K PD +GK G K
Sbjct: 75 AEKAEKAPRAAASKSKKDPLKPKRALSAYMFFSQDWRERIKAENPDA-GFGEVGKLLGAK 133
Query: 81 WKSMSEAEKAPYV-------QKALNKKAEYELALEAYKKQLNDNGAG 120
WK + E EK PY+ ++A N+K+ Y+ + KK ++G+G
Sbjct: 134 WKELDEEEKKPYIELANKDKERAENEKSAYDKGI---KKSRANSGSG 177
>gi|443895134|dbj|GAC72480.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 99
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
KKD APKRPLSAY F +D R+ K++ P+ +G+ G KWK MSEAEK PY
Sbjct: 22 KKDPAAPKRPLSAYMFFSQDHRERVKQANPEA-GFGDVGRLLGAKWKEMSEAEKKPY 77
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K ENK + +K KD NAPKR LSA+F F D R K P+ V + K G+KW
Sbjct: 82 KGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWS 140
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV--------------SEDSWKS 128
K+ Y A KA YE + AYKK++ ++GA + SE+ WK
Sbjct: 141 DADPETKSKYEAMAEKDKARYEREMTAYKKKMQNDGAPMVGGAQANQTIIKSDSEEEWKE 200
Query: 129 TSE 131
E
Sbjct: 201 DDE 203
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQK 95
KDS P+ ++AY F++ R+ K+ P+ K V K +WK+MS+ EK + +
Sbjct: 5 KDSK-PRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRFHEM 63
Query: 96 ALNKKAEYELALEAY 110
A K Y+ ++ Y
Sbjct: 64 AEKDKKRYDTEMQNY 78
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
+YE + YK + +GA
Sbjct: 148 KLXEKYEKDVADYKSKGKFDGA 169
>gi|443927140|gb|ELU45664.1| EXP1-like protein [Rhizoctonia solani AG-1 IA]
Length = 715
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS---FKESFPDNKSVAAMGKAGG 78
R A+ K K + KD NAPK+PLSAYF+F++ R ++ F D
Sbjct: 498 RSAQRKAGKSRRSNLKDPNAPKKPLSAYFMFLQWIRADPARIQDVFGDETETTRQSVLAA 557
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ--------------LNDNGAGVSED 124
KW+ +S+AEK KA +K EYE A + Y+++ ++ G V+ +
Sbjct: 558 SKWRELSDAEK-----KAEREKLEYEAARKVYEERTSGISKSNPYTGGFMHMTGTTVTSN 612
Query: 125 SWKSTSEVQ 133
SW ++++ +
Sbjct: 613 SWGTSADAE 621
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
N PK+ S + IF ++ +++K + P+ K +V+ K GG +K++S +K Y +KA
Sbjct: 411 NPPKQAPSTWQIFFTEYLQNYKATNPERKLNVSQAAKDGGAAYKALSPQQKEIYKRKARL 470
Query: 99 KKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQVSSYF 158
K EY+ L A+++ L V E++++S ++ ++GKS S + D + +S+YF
Sbjct: 471 AKQEYDRELAAWQRMLTPEDIRV-ENAFRS-AQRKAGKSRRSNLKDPNAPK--KPLSAYF 526
Query: 159 M 159
M
Sbjct: 527 M 527
>gi|58258723|ref|XP_566774.1| HMG1 [Cryptococcus neoformans var. neoformans JEC21]
gi|134106799|ref|XP_777941.1| hypothetical protein CNBA4100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260641|gb|EAL23294.1| hypothetical protein CNBA4100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222911|gb|AAW40955.1| HMG1, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 895
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS--------FKESFPDNKSVAAM 73
R + K K + G KD NAPK+PLSAYF+F++ R++ E+ +SV A
Sbjct: 526 RAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKAIRENSDIRAQVWGTEAETTKQSVMAA 585
Query: 74 GKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
+KW+S+++ EK PY+++A + K YE A + Y++
Sbjct: 586 -----EKWRSLTDDEKRPYLEQAEHDKQTYETARKQYEE 619
>gi|405117802|gb|AFR92577.1| hmg1 [Cryptococcus neoformans var. grubii H99]
Length = 907
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKS--------FKESFPDNKSVAAM 73
R + K K + G KD NAPK+PLSAYF+F++ R++ E+ +SV A
Sbjct: 538 RAQQRKEGKSRKGNIKDPNAPKKPLSAYFLFLKAIRENSDIRAQVWGTEAETTKQSVMA- 596
Query: 74 GKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
+KW+S+++ EK PY+++A + K YE A + Y++
Sbjct: 597 ----AEKWRSLTDDEKRPYLEQAEHDKQTYETARKQYEE 631
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K GKKKD NAPKRP S +F+F + R K +P + + + K G+ W +++A K P
Sbjct: 82 KRGKKKDPNAPKRPPSGFFLFCSEHRPQIKAQYP-SLGIGDVAKKLGEMWNGLTDANKQP 140
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGAGV 121
++ KA K +Y+ + YK + G +
Sbjct: 141 FLMKANKLKDKYQKDVADYKTKSKAGGVSM 170
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 141 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 199
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 200 KLKEKYEKDVADYKSKGKFDGA 221
>gi|332254661|ref|XP_003276450.1| PREDICTED: high mobility group protein B4 [Nomascus leucogenys]
Length = 189
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++ EK PY Q+A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGEMWSTTTDLEKHPYEQRAA 147
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y LE Y+KQ
Sbjct: 148 LLRAKYFEELELYRKQ 163
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R +FKE P+ + ++W+S+S+ EKA Y A K
Sbjct: 9 PKANVSSYVHFLLNYRNTFKEQQPNTYVGFKEFSRKCSEEWRSISKHEKAKYEALAKVDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK +K + KD NAPKRP SA+F+F DFR K P ++ K G+ W S S
Sbjct: 80 PKGQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHP-GLTIGDTAKKLGEMWNSSSAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
K PY +KA K +Y+ + AY+
Sbjct: 139 NKQPYERKAAKLKEKYDKDIVAYR 162
>gi|110808604|gb|ABB22048.1| HMBG4 [Homo sapiens]
gi|119627858|gb|EAX07453.1| high-mobility group box 4 [Homo sapiens]
Length = 186
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++ EK PY Q+
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSTATDLEKHPYEQRVA 147
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y LE Y+KQ N
Sbjct: 148 LLRAKYFEELELYRKQCN 165
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 28 PKKEKAGKKK---DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
PK +K+ K+K D NAPKRPLSA+F F D R + ++ PD SV + K G++W +
Sbjct: 79 PKGDKSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNEV 137
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYK 111
+ K+ Y A KA YE L+AYK
Sbjct: 138 GDDVKSKYEGLAAKDKARYEKELKAYK 164
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKALN 98
+ P+ +SAY F++ R+ K+ P+ V A K ++WK+MSE+EK + Q A
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSESEKKRFHQMADK 64
Query: 99 KKAEYELALEAYKKQLND 116
K ++ + YK D
Sbjct: 65 DKKRFDTEMADYKPPKGD 82
>gi|94966915|ref|NP_001035652.1| high mobility group protein B4 [Bos taurus]
gi|119370723|sp|Q32L34.1|HMGB4_BOVIN RecName: Full=High mobility group protein B4
gi|81673105|gb|AAI09791.1| High-mobility group box 4 [Bos taurus]
gi|296488916|tpg|DAA31029.1| TPA: high mobility group protein B4 [Bos taurus]
Length = 194
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +AP+RP S++ +F +D K P + SV + KA G+ W + ++ +K PY Q+A
Sbjct: 89 DPHAPRRPPSSFLLFCQDHYAQLKSENP-SWSVVQVAKASGKMWSAKTDVDKQPYEQRAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSE 141
+A+Y L Y+ Q N + E + E + +S +++
Sbjct: 148 LLRAKYREELSVYRNQFNARKTCLQESATNQCREFEQAESDTTD 191
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+D PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y
Sbjct: 3 KRDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 95 KALNKKAEYELALEAY 110
A KA Y+ + Y
Sbjct: 63 LAKLDKARYQEEMMNY 78
>gi|18088957|gb|AAH21180.1| High-mobility group box 4 [Homo sapiens]
gi|312150396|gb|ADQ31710.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++ EK PY Q+
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSTATDLEKHPYEQRVA 147
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y LE Y+KQ N
Sbjct: 148 LLRAKYFEELELYRKQCN 165
>gi|393236124|gb|EJD43675.1| hypothetical protein AURDEDRAFT_114701 [Auricularia delicata
TFB-10046 SS5]
Length = 107
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
APKR LSAY F++D+R KE PD S +GK G KWK M + +K PY QKA K
Sbjct: 27 APKRALSAYMFFVQDWRDRIKEENPD-ASFGEVGKLLGAKWKEMDDEDKEPYNQKATKDK 85
Query: 101 A 101
A
Sbjct: 86 A 86
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R KE P S+ K G+ W + S EKAPY KA
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECP-GISIGDTAKKLGELWSTQSSKEKAPYEAKAA 145
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 146 KLKEKYEKEVAAYR 159
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
N P+ S+Y F+ D R+ K P A K ++WK+MS EKA + + A
Sbjct: 1 NKPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKT 60
Query: 99 KKAEYELALEAY 110
K Y+ ++ Y
Sbjct: 61 DKIRYDREMKTY 72
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F +FR K P + ++ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKLPYERKAAKLKEKYEKDVAAYR 163
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + A K ++WK+MS EK+ +
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|403293162|ref|XP_003937591.1| PREDICTED: high mobility group protein B4 [Saimiri boliviensis
boliviensis]
Length = 254
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++ EK PY Q+A
Sbjct: 152 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSATTDLEKQPYEQRAA 210
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y LE Y+KQ
Sbjct: 211 LLRAKYFEELELYRKQ 226
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDN-KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 72 PKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 131
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 132 ARYQEEMMNY 141
>gi|389585513|dbj|GAB68243.1| high mobility group protein [Plasmodium cynomolgi strain B]
Length = 107
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD +APKR LSAY F ++ R PD +K VA +GK G+ W + E EKAPY +
Sbjct: 25 KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLDELEKAPYEK 84
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 85 KAQEDKVRYE 94
>gi|310789957|gb|EFQ25490.1| HMG box protein [Glomerella graminicola M1.001]
Length = 332
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKE+ + D NAPKRPL+ YF++M+ R D A+ + G ++WK+M+ AE
Sbjct: 122 KKERKKRTHDPNAPKRPLTPYFLYMQTARPIIALDLGDAAPKGAVQEEGQRRWKAMNPAE 181
Query: 89 KAPYVQKALNKKAEYELAL-----EAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIN 143
KA N +Y L L AYK+ N + + +D+ +E + + + ++
Sbjct: 182 KA-----GWNNAYQYNLRLYQARVHAYKQGGNPDARLMDDDAALKYAEEHNIQINPVDVV 236
Query: 144 DEAEQEFSSQVS 155
+ E + Q++
Sbjct: 237 PDVEDAIAEQLN 248
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
KKD +APKRPLSAY F +D R+ K + P+ +G+ G KWK MSEAEK PY
Sbjct: 22 KKDPDAPKRPLSAYMFFSQDQRERVKNANPE-AGFGEVGRLLGAKWKEMSEAEKKPY 77
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
+KKD N PKR LSAY F D R +E P K +GK G++WK+++E +KAPY
Sbjct: 23 RKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIK-FGEVGKLLGERWKALNEKQKAPYEA 81
Query: 95 KALNKKAEYELALEAY 110
KA K YE AY
Sbjct: 82 KAAADKKRYEEEKAAY 97
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK +K + KD NAPKRP SA+F+F DFR K P ++ K G+ W S S
Sbjct: 80 PKGQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHP-GLTIGDTAKKLGEMWNSSSAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
K PY +KA K +Y+ + AY+
Sbjct: 139 NKQPYERKAAKLKEKYDKDIVAYR 162
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD PK +S+Y F++ R+ K+ P+ + + A K ++WK+MS+ EK +
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDM 62
Query: 96 ALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 AKLDKVRYERDMKNY 77
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R+S +E P S +GK G +WK+++E ++ PY +
Sbjct: 17 KKKDPNAPKRGLSAYMFFANEQRESVREENP-GISFGQVGKVLGDRWKALNEKQREPYEK 75
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 76 KAQADKKRYE 85
>gi|426328852|ref|XP_004065350.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4
[Gorilla gorilla gorilla]
Length = 186
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + ++ EK PY Q+
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSTATDLEKHPYEQRVA 147
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y LE Y+KQ N
Sbjct: 148 LLRAKYFEELELYRKQCN 165
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|221053558|ref|XP_002258153.1| high mobility group protein (HMG protein) [Plasmodium knowlesi
strain H]
gi|193807986|emb|CAQ38690.1| high mobility group protein (HMG protein),putative [Plasmodium
knowlesi strain H]
Length = 99
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEA 87
+K+ KKKD APKR LSAY +++D R + P+ ++VA +GK G+ W +S A
Sbjct: 11 RKQNKRKKKDPLAPKRALSAYMFYVKDKRLELIKEKPELARNVAQVGKLVGEAWGKLSAA 70
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQLND 116
+K PY +KA K Y +E Y+K N+
Sbjct: 71 QKTPYEKKAQLDKVRYSKEIEEYRKTKNE 99
>gi|444707322|gb|ELW48604.1| High mobility group protein B4 [Tupaia chinensis]
Length = 189
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P + +V + KA G+ W M+ EK PY Q+A
Sbjct: 91 DPQAPRRPPSSFILFCQDHYAQLKRENP-SWTVVQVAKASGKMWTVMTAVEKQPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQ 113
+A Y+ LE Y+KQ
Sbjct: 150 LLRARYQEELEVYRKQ 165
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KWKS+S+ EKA Y A K
Sbjct: 11 PKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWKSISKHEKAKYEALAKLDK 70
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 71 ARYQEEMMNY 80
>gi|391345046|ref|XP_003746804.1| PREDICTED: high mobility group protein DSP1-like [Metaseiulus
occidentalis]
Length = 186
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 5 RVVAVAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESF 64
+++A KK + D + + P+ + A K+KD NAPKR LSA+F F +D R +
Sbjct: 59 QLMAAKDKKRYEDEMSTYVPKEAPRGKAARKEKDPNAPKRALSAFFHFCQDERPKVRAEL 118
Query: 65 PDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
+V + K G+KW+ + +K+ Y Q A K YEL + AYK
Sbjct: 119 -GQSTVGEVAKQLGKKWQECTGEQKSKYEQLAAKDKQRYELEMAAYK 164
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
P+ SAY F++ R+ +K+ P+ V A K ++WK+M+E EK + A K
Sbjct: 7 PRGRTSAYAYFVQTCREEYKKMHPNENVVFAEFSKKCAERWKTMNEPEKQRFQLMAAKDK 66
Query: 101 AEYELALEAY 110
YE + Y
Sbjct: 67 KRYEDEMSTY 76
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK++++ ++APY K
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNDKQRAPYEAK 78
Query: 96 ALNKKAEYELALEAY 110
A K YE +AY
Sbjct: 79 AAADKKRYEDEKQAY 93
>gi|302673176|ref|XP_003026275.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
gi|300099956|gb|EFI91372.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
Length = 81
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K++A K+KD NAPKRP ++Y ++ D R+S KE P + + + + WKS+ E E
Sbjct: 1 RKKRAKKEKDPNAPKRPATSYILYQNDCRQSMKEKNPGLHNTELL-RYISETWKSLPEQE 59
Query: 89 KAPYVQKALNKKAEYELALEAY 110
K+ Y KA K +YE A+ Y
Sbjct: 60 KSSYEAKAAKLKHDYEDAVREY 81
>gi|327260386|ref|XP_003215015.1| PREDICTED: FACT complex subunit SSRP1-like [Anolis carolinensis]
Length = 705
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 25 ENKPKKEKA-GKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
E KP+K ++ GKK KD NAPKRPLSAY +++ R + P SV + K G+ WK
Sbjct: 526 ERKPRKRQSEGKKGKDPNAPKRPLSAYMLWLNANRDKIRSESP-GMSVTDVSKKAGELWK 584
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAY 110
+MS+ +K + +KA + K +YE A++ Y
Sbjct: 585 AMSKEKKEEWDRKAEDAKRDYEKAMKEY 612
>gi|221059780|ref|XP_002260535.1| High mobility group protein [Plasmodium knowlesi strain H]
gi|193810609|emb|CAQ42507.1| High mobility group protein, putative [Plasmodium knowlesi strain
H]
Length = 104
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD +APKR LSAY F ++ R PD +K VA +GK G+ W + E EKAPY +
Sbjct: 22 KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLDEREKAPYEK 81
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 82 KAQEDKVRYE 91
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK+++E ++ PY K
Sbjct: 20 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKILGERWKALNEKQRQPYEAK 78
Query: 96 ALNKKAEYELALEAY 110
A K YE +AY
Sbjct: 79 AATDKKRYEDEKQAY 93
>gi|167388437|ref|XP_001738566.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898168|gb|EDR25112.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 395
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 31 EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
EK+ KKD N PK+P +AY +F + +K+ FPD K ++ +GK G +WK + E +K
Sbjct: 97 EKSTPKKDENKPKKPKNAYLLFSSEKYPQYKKQFPDLK-ISEIGKKIGVEWKELPEEQKK 155
Query: 91 PYVQKALNKKAEYELALEAYKKQ 113
Y+ + KAEY L+ Y Q
Sbjct: 156 KYIDQYYASKAEYNDKLKEYDAQ 178
>gi|320165273|gb|EFW42172.1| structure-specific recognition protein 1 [Capsaspora owczarzaki
ATCC 30864]
Length = 796
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 20 KARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQ 79
KA K + P K+ A KD NAPK+P+S+Y ++ + R +FK PD +V +G G
Sbjct: 661 KAPKKSSSPTKKAA---KDKNAPKKPMSSYMLWANENRAAFKAKNPD-ANVMELGSILGN 716
Query: 80 KWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
WK + E+EK + +KA + YE+ L Y+++
Sbjct: 717 AWKELGESEKNSWAEKATEARKAYEITLAEYEQK 750
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F + R++ +E P S +GK G++WK++++ ++APY K
Sbjct: 19 KKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNDKQRAPYEAK 77
Query: 96 ALNKKAEYELALEAY 110
A K YE +AY
Sbjct: 78 AAADKKRYEDEKQAY 92
>gi|357513707|ref|XP_003627142.1| HMG1/2-like protein [Medicago truncatula]
gi|355521164|gb|AET01618.1| HMG1/2-like protein [Medicago truncatula]
Length = 248
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Query: 29 KKEKAGKK---KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K+ K GK+ KDSNA KR + +F+FM++FRK+FKE+ D+K V +GK G+KW+
Sbjct: 190 KRAKVGKREKVKDSNAAKRSPTDFFVFMDEFRKTFKEANLDSKDVKRVGKEDGEKWR 246
>gi|71019847|ref|XP_760154.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
gi|46099871|gb|EAK85104.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
Length = 286
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D PKRP SA+F F+ D R S E+ N + K GG++WK MS +KAPY Q+A
Sbjct: 209 RDPAKPKRPNSAFFEFLNDLRAS--EAVIPN--ITEFSKRGGERWKQMSAEQKAPYEQRA 264
Query: 97 LNKKAEYELALEAY 110
L +Y+ LE Y
Sbjct: 265 LQALEQYKRDLELY 278
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KPKKE+ K KD NAPK+ L+ + F R+ K P + +GK G++WK M
Sbjct: 542 KPKKER--KPKDPNAPKKNLTGFMYFSNANREKVKAENP-GIAFGEIGKMLGERWKGMGA 598
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQ 113
EKAPY Q A K Y A++AYK++
Sbjct: 599 DEKAPYEQMAAKDKVRYAEAMKAYKER 625
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 28 PKKEKAGK-KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
PK E GK KKD NAPKRP SA+FIF + R K P S+ K G+ W +
Sbjct: 81 PKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETP-GLSIGDTAKKLGELWAEQTP 139
Query: 87 AEKAPYVQKALNKKAEYELALEAYK 111
+K P+ QKA K +YE + AY+
Sbjct: 140 KDKLPHEQKAAKLKEKYEKDVAAYR 164
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD + + K ++WKSMS EK +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 LAKGDKARYEREMKTY 78
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
+KD +APKRPLSA+ IF ++ R +E PD S +GK G W+ +++ +K Y K
Sbjct: 23 RKDPDAPKRPLSAFMIFSKENRPRIREENPD-ASFGDLGKLLGAAWRELNDKDKQVYTDK 81
Query: 96 ALNKKAEYELALEAYK 111
A K YE + YK
Sbjct: 82 ADEDKGRYEREMSTYK 97
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|299472000|emb|CBN80083.1| high mobility group protein [Ectocarpus siliculosus]
Length = 242
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD APKR +SA+ F + R +E++P+ K++ M K GQ+W MS+ EK PY K
Sbjct: 134 KKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNM-DMSKMLGQEWNRMSDEEKLPYQTK 192
Query: 96 ALNKKAEYELALEAYKKQLNDNGA 119
A + Y A+ +K D GA
Sbjct: 193 AHDDTLRYREAMTVWK----DGGA 212
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
+AP+R SAY +F + R+ K + P+ V + K KW+ +SE +K + KA
Sbjct: 52 DAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQD 111
Query: 100 KAEYELALEAYKKQL 114
K YE L Y L
Sbjct: 112 KDRYEQELSVYDGPL 126
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAA 149
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 150 KLKEKYEKDVADYKSKGKFDGA 171
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R +E P S +GK G++WK++S+ ++ PY +
Sbjct: 18 KKKDPNAPKRGLSAYMFFANENRDKVREENP-GISFGQVGKMLGERWKALSDTDRRPYEE 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAAADKKRYE 86
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 104 DPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAA 162
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 163 KLKEKYEKDVADYK 176
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 33 AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVA--AMGKAGGQKWKSMSEAEKA 90
A KKKD NAPKR LSAY F + R++ + DN +A +GK G++WK++SE ++
Sbjct: 14 AQKKKDPNAPKRGLSAYMFFANEQRENVRN---DNPGIAFGQVGKVLGERWKALSEKQRQ 70
Query: 91 PYVQKALNKKAEYELALEAYKKQ 113
PY KA K YE AY Q
Sbjct: 71 PYEAKAAADKKRYEDEKAAYNAQ 93
>gi|156057705|ref|XP_001594776.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980]
gi|154702369|gb|EDO02108.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY IF R+ K N S + K G+ W+++S AE
Sbjct: 104 RKYRRHPKTDENAPERPPSAYVIFSNKMREDLKGR---NLSFTEIAKLVGENWQNLSPAE 160
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY Q A K Y L YKK
Sbjct: 161 KEPYEQSAYKAKERYNNELAEYKK 184
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 28 PKKEKAGK-KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
PK E GK KKD NAPKRP SA+FIF + R K P S+ K G+ W +
Sbjct: 81 PKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETP-GLSIGDTAKKLGELWAEQTP 139
Query: 87 AEKAPYVQKALNKKAEYELALEAYK 111
+K P+ QKA K +YE + AY+
Sbjct: 140 KDKLPHEQKAAKLKEKYEKDVAAYR 164
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD + + K ++WKSMS EK +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 LAKGDKARYEREMKTY 78
>gi|409075858|gb|EKM76234.1| hypothetical protein AGABI1DRAFT_16670, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426193694|gb|EKV43627.1| hypothetical protein AGABI2DRAFT_56560, partial [Agaricus bisporus
var. bisporus H97]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD APKR LSAY F +D+R+ K P+ +GK G KWK M E EK PYV++
Sbjct: 17 KKDPKAPKRALSAYMFFSQDWRERIKTENPEA-GFGEVGKLLGAKWKEMDEEEKKPYVEQ 75
Query: 96 ALNKKAEYE 104
A K E
Sbjct: 76 ATADKTRAE 84
>gi|361127235|gb|EHK99210.1| putative Non-histone chromosomal protein 6 [Glarea lozoyensis
74030]
Length = 100
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R++ +E P S +GK G++WK++S+ ++ PY
Sbjct: 16 KKKDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKVLGERWKALSDTQRKPYAA 74
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 75 KADADKIRYE 84
>gi|307192728|gb|EFN75836.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 445
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K ENK + +K KD NAPKR LSA+F F D R K P+ V + K G+KW
Sbjct: 327 KGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKKWS 385
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGV-----------SEDSWKSTSE 131
K+ Y A KA YE + AYKK++ D V SE+ WK E
Sbjct: 386 DADPETKSKYEAMAEKDKARYEREMTAYKKKMQDGAPVVGGAPANTVKSDSEEEWKEDDE 445
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR +SA+F++ D R + + PD + V + K G++WK +S+++KA Y +
Sbjct: 91 KKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDSDKAKYEK 149
Query: 95 KALNKKAEYELAL 107
KA ++A Y+ L
Sbjct: 150 KAQTERARYQKEL 162
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQK 95
KD N PK +SAY F+++ R+ ++ +P+ + V + +WK+M++ EK +
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQVL 62
Query: 96 ALNKKAEYELALEAY 110
A K YE + Y
Sbjct: 63 AEADKRRYEQNMAKY 77
>gi|392563521|gb|EIW56700.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563525|gb|EIW56704.1| HMG-box [Trametes versicolor FP-101664 SS1]
gi|392563535|gb|EIW56714.1| HMG-box [Trametes versicolor FP-101664 SS1]
Length = 116
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
K R A + K KA KKD APKR LSAY F +D+R+ K PD +GK
Sbjct: 8 TTKRRAATKQDKAPKAKGKKDPKAPKRALSAYMFFSQDWRERIKAENPDA-GFGEIGKLL 66
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G KWK + + EK PY+ +A K+ E AY
Sbjct: 67 GAKWKELDDDEKKPYLDQAAADKSRAEEEKNAY 99
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR LSAY F++D+R+ K PD ++G+ G KW+ MS +EK PY K
Sbjct: 17 KKDPNKPKRALSAYMFFVQDWRERIKSENPDA-DFGSVGRLLGAKWQEMSASEKKPYEDK 75
Query: 96 -------ALNKKAEYELA 106
A +KAEY+ A
Sbjct: 76 AQADKDRAAKEKAEYDAA 93
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK K + KD NAPKRP SA+F+F DFR K +P S+ K G+ W S S
Sbjct: 80 PKGHKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGDYP-GLSIGDTAKKLGEMWNSSSAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + AY+
Sbjct: 139 EKQPYEKKAAKLKEKYDKDIVAYR 162
>gi|332847763|ref|XP_003315517.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan troglodytes]
gi|397485725|ref|XP_003813991.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 207
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K GKKKD NAPKRP S +F+F +F K + P + + K + WK+++++EK P
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNP-GIPIGDVAKKLSEMWKNLNDSEKQP 140
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGA 119
Y+ +A K +YE + K + +GA
Sbjct: 141 YITQAAKLKEKYEKDVAVCKSKGKSDGA 168
>gi|407035464|gb|EKE37713.1| HMG (high mobility group) box domain containing protein [Entamoeba
nuttalli P19]
Length = 369
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 31 EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
EK+ KKD N PK+P +AY +F + +K+ FPD K ++ +GK G +WK + E +K
Sbjct: 96 EKSTPKKDENKPKKPKNAYLLFSSEKYPQYKKQFPDLK-ISEIGKKIGVEWKELPEEQKK 154
Query: 91 PYVQKALNKKAEYELALEAYKKQ 113
Y+ + KAEY L+ Y Q
Sbjct: 155 KYIDQYYASKAEYNDKLKEYDAQ 177
>gi|67470045|ref|XP_650993.1| HMG box protein [Entamoeba histolytica HM-1:IMSS]
gi|56467670|gb|EAL45607.1| HMG box protein [Entamoeba histolytica HM-1:IMSS]
gi|449703510|gb|EMD43949.1| HMG (high mobility group) box domain containing protein, putative
[Entamoeba histolytica KU27]
Length = 384
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 31 EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
EK+ KKD N PK+P +AY +F + +K+ FPD K ++ +GK G +WK + E +K
Sbjct: 96 EKSTPKKDENKPKKPKNAYLLFSSEKYPQYKKQFPDLK-ISEIGKKIGVEWKELPEEQKK 154
Query: 91 PYVQKALNKKAEYELALEAYKKQ 113
Y+ + KAEY L+ Y Q
Sbjct: 155 KYIDQYYASKAEYNDKLKEYDAQ 177
>gi|395326844|gb|EJF59249.1| hypothetical protein DICSQDRAFT_109066 [Dichomitus squalens
LYAD-421 SS1]
Length = 117
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A KAE PK A KKD APKR LSAY F +D+R+ K PD +GK G K
Sbjct: 14 AVKAEKAPK---AKGKKDPKAPKRALSAYMFFSQDWRERIKAENPDA-GFGEIGKLLGAK 69
Query: 81 WKSMSEAEKAPYVQKALNKKAEYE 104
WK + + EK PY+ +A KA E
Sbjct: 70 WKELDDEEKKPYLDQAAADKARAE 93
>gi|156101624|ref|XP_001616505.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148805379|gb|EDL46778.1| high mobility group protein, putative [Plasmodium vivax]
Length = 107
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD +APKR LSAY F ++ R PD +K VA +GK G+ W + E EKAPY +
Sbjct: 25 KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLDEREKAPYEK 84
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 85 KAQEDKLRYE 94
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K GKKKD NAP RP S + +F +F K + P S+ + K + W ++S +EK P
Sbjct: 106 KGGKKKDPNAPTRPPSGFCLFCSEFHPKIKSTNP-GISIGDVAKKLSEMWSNLSGSEKQP 164
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGA 119
Y+ KA + +YE + YK + +GA
Sbjct: 165 YITKAAQLREKYEKDVADYKSKGKFDGA 192
>gi|384489718|gb|EIE80940.1| hypothetical protein RO3G_05645 [Rhizopus delemar RA 99-880]
Length = 176
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
KA++ KK+K +KD NAPKR LS+Y ++ + R PD K++ + K G+ W
Sbjct: 38 KADHVNKKKKV--EKDPNAPKRNLSSYMLYSQAVRPKVAAEHPDMKAIE-IAKLVGEMWN 94
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
+SE EKAPY+++A +K +E +YK L
Sbjct: 95 KLSEKEKAPYIKQAEKEKIRFEKENASYKTTL 126
>gi|355691926|gb|EHH27111.1| hypothetical protein EGK_17228 [Macaca mulatta]
Length = 196
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
DSNAPKRP S +F+F +F K + P S+ M K G+ WK+++++EK PY+ KA
Sbjct: 76 DSNAPKRPPSGFFLFSSEFCPKMKSTNP-GISIGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 98 NKKAEYE 104
K +YE
Sbjct: 135 KLKEKYE 141
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P +K + KD NAPKRP SA+FIF DFR K P S+ K G W S +
Sbjct: 80 PNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHP-GLSIGDTAKKLGVMWNSSAAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + +Y+
Sbjct: 139 EKKPYEKKAATLKEKYDKDIASYR 162
>gi|224058355|ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
gi|222846744|gb|EEE84291.1| high mobility group family [Populus trichocarpa]
Length = 498
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK PLSA+F+F + R + +NK+V + K G++WK+M+E +K PY + A
Sbjct: 295 DPLKPKHPLSAFFLFSNERRAAL---LAENKNVLEVAKIAGEEWKNMTEKQKRPYEEIAK 351
Query: 98 NKKAEYELALEAYKKQLNDNGAGV 121
K +Y +EAYK+ ++ +
Sbjct: 352 KNKEKYTQEMEAYKQNKDEEAMNL 375
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S++ +F ++ RKS P ++ ++ AM KWK + + EK + K
Sbjct: 420 DPNKPKKPASSFLLFSKETRKSLVHEHPGINSSTLTAMISV---KWKELIQEEKQIWNCK 476
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVS 122
A AE A+EAYKK+L + V+
Sbjct: 477 A----AE---AMEAYKKELEEYHKSVA 496
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P +K + KD NAPKRP SA+FIF DFR K P S+ K G W S +
Sbjct: 80 PNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHP-GLSIGDTAKKLGVMWNSSAAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + +Y+
Sbjct: 139 EKKPYEKKAATLKEKYDKDIASYR 162
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P +K + KD NAPKRP SA+FIF DFR K P S+ K G W S +
Sbjct: 80 PNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHP-GLSIGDTAKKLGVMWNSSAAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + +Y+
Sbjct: 139 EKKPYEKKAATLKEKYDKDIASYR 162
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P +K + KD NAPKRP SA+FIF DFR K P S+ K G W S +
Sbjct: 80 PNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHP-GLSIGDTAKKLGVMWNSSAAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + +Y+
Sbjct: 139 EKKPYEKKAATLKEKYDKDIASYR 162
>gi|343425092|emb|CBQ68629.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 290
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D PKRP SA+F F+ D R S E+ N + K GG++WK MS +KAPY Q+A
Sbjct: 213 RDPAKPKRPNSAFFEFLNDLRAS--EAVIPN--ITEFSKRGGERWKQMSAEQKAPYEQRA 268
Query: 97 LNKKAEYELALEAY 110
L +Y+ LE Y
Sbjct: 269 LQALEQYKRDLEIY 282
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K E+K + +K KD NAPKR LSA+F F D R K P+ V + K G+KW
Sbjct: 339 KGESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWS 397
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNG--AGVSEDSWKSTSE 131
K+ Y A KA YE + AYKK++ D GV ++ KS SE
Sbjct: 398 DADPETKSKYEAMAEKDKARYEREMTAYKKKMKDGAPVVGVPANTVKSDSE 448
>gi|380477578|emb|CCF44078.1| HMG box protein [Colletotrichum higginsianum]
Length = 328
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKE+ + D NAPKRPL+ YF++M+ R D A+ + G ++WK+M+ AE
Sbjct: 123 KKERKKRTHDPNAPKRPLTPYFLYMQTARPIIALDLGDAAPKGAVQEEGQRRWKAMNPAE 182
Query: 89 KAPYVQKALNKKAEYELAL-----EAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIN 143
KA + N +Y L L AYK+ N + +D+ +E + + + ++
Sbjct: 183 KAGW-----NNAYQYNLRLYQARVHAYKQGGNSEARLMDDDAALKYAEEHNIQINPVDVV 237
Query: 144 DEAEQEFSSQVS 155
+ E + Q++
Sbjct: 238 PDVEDAIAEQLN 249
>gi|302309760|ref|XP_002999554.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049084|emb|CAR57991.1| unnamed protein product [Candida glabrata]
Length = 93
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+++ +KKD NAPKR LSAY F + R + PD + +G+ G++WK+++
Sbjct: 7 PRRKTTRRKKDPNAPKRALSAYMFFANENRDIVRSENPD-VTFGQIGRLLGERWKALTAE 65
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
+K PY KA K YE E Y
Sbjct: 66 DKQPYEAKAEADKKRYESEKELY 88
>gi|395857899|ref|XP_003801318.1| PREDICTED: high mobility group protein B4 [Otolemur garnettii]
Length = 187
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P N SV + KA G+ W + AEK PY ++A
Sbjct: 89 DPQAPRRPPSSFLLFCKDHYAQLKRENP-NWSVVQVAKASGKMWSLSTNAEKQPYEERAA 147
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y+ L+ Y++Q N
Sbjct: 148 LLRAKYQEELQIYRRQCN 165
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKVNVSSYIHFLLNYRNKFKEQQPNTYVGFKDFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMHY 78
>gi|226530710|ref|NP_001144208.1| hypothetical protein [Zea mays]
gi|195638446|gb|ACG38691.1| hypothetical protein [Zea mays]
gi|413936487|gb|AFW71038.1| hypothetical protein ZEAMMB73_874920 [Zea mays]
Length = 487
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
+P+SAYF++ ++ R + + K+V +GK G++WK+M+E ++APY + A +K EY
Sbjct: 289 QPMSAYFVYSQERRATL---VAEKKNVPEIGKITGEEWKNMTEGQRAPYEEVARKQKEEY 345
Query: 104 ELALEAYKKQLNDNGAGV 121
+E YK++ + A +
Sbjct: 346 HKQMEVYKQKKAEEAASL 363
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 31 EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
EK KKD NAPKR LSAY F + R + +E P S +GK G++WK++SE ++
Sbjct: 15 EKKRAKKDPNAPKRGLSAYMFFANEQRDNVREENP-GVSFGQVGKILGERWKALSEKQRV 73
Query: 91 PYVQKALNKKAEYELALEAY 110
PY KA K YE AY
Sbjct: 74 PYEAKAAADKKRYEDEKAAY 93
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSAY F R + P + V + KA G+KWK++++ EK+ Y Q+
Sbjct: 517 KKDPNAPKRGLSAYMFFSAAKRAEITAANP-SFGVTDVAKALGEKWKTITDEEKSVYQQQ 575
Query: 96 ALNKKAEYELALEAYK 111
A K YE +EAY+
Sbjct: 576 ADEDKIRYEREMEAYR 591
>gi|392558113|gb|EIW51341.1| hypothetical protein TRAVEDRAFT_80819, partial [Trametes versicolor
FP-101664 SS1]
Length = 91
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKW 81
R A + K KA KKD APKR LSAY F +D+R+ K PD +GK G KW
Sbjct: 3 RAATKQDKAPKAKGKKDPKAPKRALSAYMFFSQDWRERIKAENPDA-GFGEIGKLLGAKW 61
Query: 82 KSMSEAEKAPYVQKALNKKAEYELALEAY 110
K + + EK PY+ +A K+ E AY
Sbjct: 62 KELDDDEKKPYLDQAAADKSRAEEEKNAY 90
>gi|346975183|gb|EGY18635.1| hypothetical protein VDAG_09161 [Verticillium dahliae VdLs.17]
Length = 518
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP RP SAY +F R K N + + K G+KW+S+S E
Sbjct: 103 RKYRRHPKADDNAPGRPPSAYVLFSNKMRDDLKGR---NLTFTKIAKLVGEKWQSLSHIE 159
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K P +ALN K +Y L YKK
Sbjct: 160 KEPVETQALNAKEKYNQDLAEYKK 183
>gi|15237042|ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis thaliana]
gi|7267807|emb|CAB81209.1| 98b like protein [Arabidopsis thaliana]
gi|22136604|gb|AAM91621.1| putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 446
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK+P+SAY I+ + R + K +NKSV + K G++WK++SE +KAPY Q A
Sbjct: 242 DPLKPKQPISAYLIYANERRAALK---GENKSVIEVAKMAGEEWKNLSEEKKAPYDQMAK 298
Query: 98 NKKAEYELALEAYKK 112
K Y +E YK+
Sbjct: 299 KNKEIYLQEMEGYKR 313
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 16/95 (16%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKW 81
A+NK K E D N PK+P S+YF+F +D RKS E P +N +V A KW
Sbjct: 358 AKNKKKNENV----DPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTA---HISLKW 410
Query: 82 KSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+ E EK Y KA AE +EAYKK++ +
Sbjct: 411 MELGEEEKQVYNSKA----AEL---MEAYKKEVEE 438
>gi|242006908|ref|XP_002424284.1| predicted protein [Pediculus humanus corporis]
gi|212507684|gb|EEB11546.1| predicted protein [Pediculus humanus corporis]
Length = 768
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
+SNAPKRP SAYFI+M + R KE +P N + + K G+ W+ + +K + +KA
Sbjct: 540 NSNAPKRPPSAYFIWMNENRDKLKEEYP-NLQMTELAKKAGEVWRELK--DKTKWNEKAK 596
Query: 98 NKKAEYELALEAY 110
KAEYE+AL+ +
Sbjct: 597 KAKAEYEVALKKF 609
>gi|17507971|ref|NP_491688.1| Protein HMG-3 [Caenorhabditis elegans]
gi|74956084|sp|O01683.1|SSP1B_CAEEL RecName: Full=FACT complex subunit ssrp1-B; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1-B; AltName: Full=HMG box-containing protein 3;
AltName: Full=Structure-specific recognition protein 1-B
gi|351065896|emb|CCD61910.1| Protein HMG-3 [Caenorhabditis elegans]
Length = 689
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKR +AY I+ R S KE D ++ + K G KWKSMS +K + KA
Sbjct: 557 DPNEPKRATTAYIIWFNANRNSMKE---DGDTLGDVAKKAGAKWKSMSADDKKEWNDKAA 613
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKST 129
KA YE ++ YKK NG GV + S ST
Sbjct: 614 QDKARYEAEMKEYKK----NGGGVEKASGPST 641
>gi|303289076|ref|XP_003063826.1| histone chaperone [Micromonas pusilla CCMP1545]
gi|226454894|gb|EEH52199.1| histone chaperone [Micromonas pusilla CCMP1545]
Length = 657
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
D NAPKRPLS+Y IF + R E P S+ +GKA G KWK M+ EK PY
Sbjct: 553 DPNAPKRPLSSYMIFAGENRGKLVEETP-GMSIGEIGKALGAKWKEMTAEEKVPY 606
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM+KA KA + PK E K KD NAPKR SA+F+F ++
Sbjct: 50 KTISAKEKGKFEDMVKADKARYEREMKTYIPPKGETKKKFKDLNAPKRTPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
R K P S+ + K G+ W + + +K PY +KA+ K +YE + AY+
Sbjct: 110 RPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAVKLKEKYEKDIAAYR 163
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAYF F D R+ ++ P NK + + ++W+++ + ++A Y +
Sbjct: 106 KKKDPNAPKRALSAYFFFCNDIRQEVRDENP-NKKITEIATLLAERWRALPDKKRAKYQK 164
Query: 95 KALNKKAEYELALEAYKKQ 113
K +Y+ ++AY Q
Sbjct: 165 MHEEAKVKYQQQMDAYNAQ 183
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K KKKD NAPKR LSA+ F D R++ K+ P+ + + G++WK +S+ E+ P
Sbjct: 15 KPRKKKDKNAPKRALSAFMFFSNDIRETVKKEMPE-LAFLQISSEIGRRWKKISDEERRP 73
Query: 92 YVQKALNKKAEYELALEAY 110
Y + A K Y+ E Y
Sbjct: 74 YDELAAADKRRYQEEKEDY 92
>gi|118488333|gb|ABK95985.1| unknown [Populus trichocarpa]
Length = 232
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK PLSA+F+F + R + +NK+V + K G++WK+M+E +K PY + A
Sbjct: 29 DPLKPKHPLSAFFLFSNERRAAL---LAENKNVLEVAKIAGEEWKNMTEKQKRPYEEIAK 85
Query: 98 NKKAEYELALEAYKKQLNDNGAGV 121
K +Y +EAYK+ ++ +
Sbjct: 86 KNKEKYTQEMEAYKQNKDEEAMNL 109
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S++ +F ++ RKS P ++ ++ AM KWK + + EK + K
Sbjct: 154 DPNKPKKPASSFLLFSKETRKSLVHEHPGINSSTLTAMISV---KWKELIQEEKQIWNCK 210
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVS 122
A AE A+EAYKK+L + V+
Sbjct: 211 A----AE---AMEAYKKELEEYHKSVA 230
>gi|125538867|gb|EAY85262.1| hypothetical protein OsI_06634 [Oryza sativa Indica Group]
Length = 504
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
+P+SAYF++ + R + + K+V +G+ G++WK+MSEAEKAP+ A ++ EY
Sbjct: 287 QPMSAYFVYTQQRRAAL---VAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 343
Query: 104 ELALEAYKKQ 113
++ + AY+++
Sbjct: 344 QVEMAAYRQR 353
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKK-EKAGKKKDSNAPKRPLSAYFIFMEDFRKS 59
MK + + +K+ +++K K E + KK A D N PK+P S++ +F ++ R+
Sbjct: 372 MKQEALQLLKKKEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKEARRQ 431
Query: 60 FKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGA 119
E P S + + KWK + EAEK + KA A Y+ +E Y K +G
Sbjct: 432 LAEERPGVAS-STLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDMEEYTKAAASSGG 490
Query: 120 G 120
G
Sbjct: 491 G 491
>gi|388857490|emb|CCF48846.1| uncharacterized protein [Ustilago hordei]
Length = 292
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D PKRP SA+F F+ D R +E+ N + K GG++WK M+ +KAPY Q+A
Sbjct: 215 RDPAKPKRPNSAFFEFLNDLRA--RETVIPN--ITEFSKRGGERWKQMAPEQKAPYEQRA 270
Query: 97 LNKKAEYELALEAY 110
L+ +Y+ LE Y
Sbjct: 271 LHALEQYKRDLEIY 284
>gi|66840992|emb|CAI64395.1| putative high mobility group protein [Triticum aestivum]
Length = 112
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 8/67 (11%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY--------V 93
PKR + +F F+ +FR + E P+ K VAA+ KA G+KW+SMS+ EKA Y
Sbjct: 23 PKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKWRSMSDEEKAKYGGKKADAPA 82
Query: 94 QKALNKK 100
KA+NKK
Sbjct: 83 SKAVNKK 89
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|297812489|ref|XP_002874128.1| hypothetical protein ARALYDRAFT_910355 [Arabidopsis lyrata subsp.
lyrata]
gi|297319965|gb|EFH50387.1| hypothetical protein ARALYDRAFT_910355 [Arabidopsis lyrata subsp.
lyrata]
Length = 171
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 20 KARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQ 79
+A +AE++ K+ + K KDSN P PL+ + IFM FRKSF+ + + V + K G +
Sbjct: 45 QAVEAESQAKRRR--KAKDSNRP--PLTGFVIFMNGFRKSFRTDY-NGSLVKEVSKIGWE 99
Query: 80 KWKSMSEAEKAPYVQKA 96
WKSM+E EK YV KA
Sbjct: 100 MWKSMTEDEKKVYVDKA 116
>gi|397524101|ref|XP_003832048.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 130
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 34 GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYV 93
G K D NAPKRPLS +F+F +F K + P S+ + K G+ W +++++EK PYV
Sbjct: 21 GGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYV 79
Query: 94 QKALNKKAEYELALEAYK 111
K + K +YE + YK
Sbjct: 80 TK-VAKLKKYEKDVADYK 96
>gi|47497872|dbj|BAD20056.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|50252043|dbj|BAD27975.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|125581537|gb|EAZ22468.1| hypothetical protein OsJ_06136 [Oryza sativa Japonica Group]
Length = 504
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
+P+SAYF++ + R + + K+V +G+ G++WK+MSEAEKAP+ A ++ EY
Sbjct: 287 QPMSAYFVYTQQRRAAL---VAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 343
Query: 104 ELALEAYKKQ 113
++ + AY+++
Sbjct: 344 QVEMAAYRQR 353
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKK-EKAGKKKDSNAPKRPLSAYFIFMEDFRKS 59
MK + + +K+ +++K K E + KK A D N PK+P S++ +F ++ R+
Sbjct: 372 MKQEALQLLKKKEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKEARRQ 431
Query: 60 FKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
E P S + + KWK + EAEK + KA A Y+ +E Y K
Sbjct: 432 LAEERPGVAS-STLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDMEEYTK 483
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F +FR K P + ++ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K P+ +KA K +YE + AY+
Sbjct: 140 DKLPFERKAAKLKEKYEKDVAAYR 163
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + A K ++WK+MS EK+ +
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 8 NAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 66
Query: 100 KAEYELALEAYK 111
K +YE + YK
Sbjct: 67 KEKYEKDVADYK 78
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD N PKR LSAY F + R ++ P K +GK G+KWK +SE +KAPY
Sbjct: 23 KKKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIK-FGEVGKQLGEKWKGLSEKQKAPYEA 81
Query: 95 KALNKKAEYELALEAY 110
KA K YE AY
Sbjct: 82 KAAADKKRYEEEKAAY 97
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W +++E EK PY KA
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNEGEKQPYNNKAA 122
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 123 KLKEKYEKDVADYK 136
>gi|89475586|gb|ABD73318.1| high-mobility group box 1 [Oncorhynchus mykiss]
Length = 154
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P S+ + K G+KW +++
Sbjct: 80 PKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAE 138
Query: 88 EKAPY 92
+K PY
Sbjct: 139 DKVPY 143
>gi|384500858|gb|EIE91349.1| hypothetical protein RO3G_16060 [Rhizopus delemar RA 99-880]
Length = 316
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K K D+NAP +P SAY +F D R K+ N+S + K G +WKS+S E
Sbjct: 157 RKYHRHPKPDTNAPVKPPSAYVMFSNDIRAELKQ---QNRSFTDLAKIIGDRWKSISAEE 213
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K Y KAL + +Y +E Y+K
Sbjct: 214 KELYETKALKAREKYLKEIEEYQK 237
>gi|356523471|ref|XP_003530362.1| PREDICTED: high mobility group B protein 13-like isoform 1 [Glycine
max]
Length = 478
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK P+SAYF+F D R + +NK+ + K ++WK+M+E +K PY + A K
Sbjct: 267 PKHPMSAYFLFTNDRRAALA---AENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKE 323
Query: 102 EYELALEAYKKQLNDNGA 119
+Y L +EAYK++ ++ A
Sbjct: 324 QYALEMEAYKQKKDEEAA 341
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PK+P S++ +F ++ RK+ +E P S + + KWK +SE ++ + +A
Sbjct: 392 DPNRPKKPASSFILFSKEARKTLQEERP-GISTSTLNALVSLKWKELSEEDRQFWNGQAS 450
Query: 98 NKKAEYELALEAYKKQLND 116
A++AYKK+L +
Sbjct: 451 K-------AMDAYKKELEE 462
>gi|398398886|ref|XP_003852900.1| hypothetical protein MYCGRDRAFT_31129, partial [Zymoseptoria
tritici IPO323]
gi|339472782|gb|EGP87876.1| hypothetical protein MYCGRDRAFT_31129 [Zymoseptoria tritici IPO323]
Length = 90
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESF---PDNKSVAA--MGKAGGQKWKSMSEAEK 89
K++D NAPKRPL+AYF ++ + R PD + A + K ++WK++++AE+
Sbjct: 6 KQRDMNAPKRPLTAYFRYLREQRPILTREMAENPDTEGTKAGDISKLATERWKALTDAER 65
Query: 90 APYVQKALNKKAEYELALEAYKKQL 114
PY Q + +YE +AYK+ L
Sbjct: 66 EPYKQAYQKELLKYETDTKAYKESL 90
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAY F + R++ +E P + +GK G++WK++++ ++ PY
Sbjct: 18 KKKDPNAPKRGLSAYMFFANEQRENVREENP-GITFGQVGKVLGERWKALNDKQRTPYEA 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAAQDKKRYE 86
>gi|356523473|ref|XP_003530363.1| PREDICTED: high mobility group B protein 13-like isoform 2 [Glycine
max]
Length = 467
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK P+SAYF+F D R + +NK+ + K ++WK+M+E +K PY + A K
Sbjct: 267 PKHPMSAYFLFTNDRRAALA---AENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKE 323
Query: 102 EYELALEAYKKQLNDNGA 119
+Y L +EAYK++ ++ A
Sbjct: 324 QYALEMEAYKQKKDEEAA 341
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 11 QKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV 70
QK+ +LK ++ K K K D N PK+P S++ +F ++ RK+ +E P S
Sbjct: 354 QKQEALQLLKKKEKTENIIKNKDDKNSDPNRPKKPASSFILFSKEARKTLQEERP-GIST 412
Query: 71 AAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+ + KWK +SE ++ + +A A++AYKK+L +
Sbjct: 413 STLNALVSLKWKELSEEDRQFWNGQASK-------AMDAYKKELEE 451
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + +E P S +GK G++WK++++ ++APY KA
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENP-GISFGQVGKILGERWKALTDKQRAPYEAKAA 79
Query: 98 NKKAEYELALEAYKKQLN 115
K YE +AY Q +
Sbjct: 80 ADKKRYEDEKQAYNAQAD 97
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|356513291|ref|XP_003525347.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 473
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK P+SAYF+F D R + +NK+ + K ++WK+M+E +K PY + A
Sbjct: 261 DPLKPKHPMSAYFLFTNDRRAAL---VAENKNFLEVPKITAEEWKNMTEEQKRPYEEMAK 317
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +Y L +E YK++ ++ A
Sbjct: 318 KNKEKYALEMEVYKQKKDEEAA 339
>gi|242781691|ref|XP_002479852.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781695|ref|XP_002479853.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781700|ref|XP_002479854.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218719999|gb|EED19418.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720000|gb|EED19419.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720001|gb|EED19420.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
Length = 103
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
+KKD NAPKR LSAY F + R+ ++ P + A+G+ G+ WK +S+AE+ PY
Sbjct: 18 RKKDPNAPKRGLSAYMFFANENRERVRDENP-GIAFGALGRKLGELWKGLSDAERKPYED 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAAADKKRYE 86
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
N PKRP + YF+++ + R S KE PD K V + K ++WK++ E EK Y KA
Sbjct: 24 NRPKRPQTPYFLYLHEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQAKADAA 82
Query: 100 KAEYELALEAY--KKQLN 115
K +Y+ +E Y KKQ++
Sbjct: 83 KEQYKKDMEKYTGKKQVS 100
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 31 EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
EK KKD NAPKR LSAY F + R++ +E P S +GK G++WK++S+ ++
Sbjct: 15 EKKRAKKDPNAPKRGLSAYMFFANEQRENVREENP-GVSFGQVGKILGERWKALSDKQRT 73
Query: 91 PYVQKALNKKAEYELALEAY 110
PY KA K YE AY
Sbjct: 74 PYEAKAAADKKRYEDEKAAY 93
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +FIF R +E P S+ + K G+KW +M EK PY Q+A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECP-GLSIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 98 NKKAEYELALEAYK 111
K +Y+ + AY+
Sbjct: 166 KLKEKYKKDVAAYR 179
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K E+K + +K KD NAPKR LSA+F F D R K P+ V + K G+KW
Sbjct: 303 KGESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVKMLNPEF-GVGDIAKELGKKWS 361
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNG--AGVSEDSWKSTSE 131
K+ Y A KA YE + AYKK++ D GV ++ KS SE
Sbjct: 362 DADPETKSKYEAMAEKDKARYEREMTAYKKKMKDGAPVVGVPANTVKSDSE 412
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
KP K+++ K+KD NAPKR +S + F + R++ K++ P S +G+ G+KWK +S
Sbjct: 515 KPAKKESNKEKDPNAPKRAMSGFMFFSKLERENLKKTNP-GISFTDVGRVLGEKWKKLSA 573
Query: 87 AEKAPYVQKALNKKAEYELALEAYK 111
EK PY KA K Y + YK
Sbjct: 574 EEKEPYEAKAREDKKRYMDEISGYK 598
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 50 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
R K P S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 110 RPKIKGEHP-GLSIGDVAKKLGEMWNNTAVYDKQPYGKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|290998589|ref|XP_002681863.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
gi|284095488|gb|EFC49119.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
Length = 219
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K+ KKKD NAPK+P + YF+F ++ R++ K + KS + + K G+ W S+S+ +K P
Sbjct: 5 KSTKKKDPNAPKKPKTGYFLFCDEHREAAKAKTGEKKSASEVSKVLGEMWNSLSDEQKKP 64
Query: 92 YVQKALNKKAEYELALEAYKK 112
Y K Y +E YKK
Sbjct: 65 YNDKYKKSLDGYNAQMEEYKK 85
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRPL++Y IF ++ RK E K V + K G WK MS+ +K PY+ +A KA
Sbjct: 119 PKRPLTSYMIFSQEMRKKLLEEDSTLK-VTEVAKKVGALWKKMSDEQKKPYIAQAEKLKA 177
Query: 102 EYELALEAY 110
Y++ E Y
Sbjct: 178 AYKVQKEEY 186
>gi|156837652|ref|XP_001642846.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113421|gb|EDO14988.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK +KKD NAPKR LSAY F + R + PD S +G+ G+KWK+++ +
Sbjct: 8 KKRTTRRKKDPNAPKRALSAYMFFANETRDIVRAENPD-VSFGQVGRILGEKWKALTPED 66
Query: 89 KAPYVQKALNKKAEYELALEAYKKQL 114
K P+ KA K YE E Y L
Sbjct: 67 KVPFEAKAEADKKRYESEKELYNATL 92
>gi|19114226|ref|NP_593314.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74627097|sp|P87057.1|NHP6_SCHPO RecName: Full=Non-histone chromosomal protein 6
gi|2058376|emb|CAB08172.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe]
Length = 108
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+ K+ +KKD N PKR +SA+ F + R+ K PD + +G G++WK ++
Sbjct: 2 PRAAKSSRKKDPNTPKRNMSAFMFFSIENREKMKTDNPD-ATFGQLGSLLGKRWKELTST 60
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQL 114
E+ PY +KA K YE + Y +L
Sbjct: 61 EREPYEEKARQDKERYERERKEYDTKL 87
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P ++ + K G+ W
Sbjct: 80 PKGEKKKRFKDPNAPKRPPSAFFIFCADFRAKVKGETP-GPTIGDVAKKLGEMWNGTCAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKQPYEKKAAKLKEKYEKDIAAYR 162
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +FIF R +E P S+ + K G+KW +M EK PY Q+A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECP-GLSIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 98 NKKAEYELALEAYK 111
K +Y+ + AY+
Sbjct: 166 KLKEKYKKDVAAYR 179
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +FIF R +E P S+ + K G+KW +M EK PY Q+A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECP-GLSIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 98 NKKAEYELALEAYK 111
K +Y+ + AY+
Sbjct: 166 KLKEKYKKDVAAYR 179
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 31 EKAGKKKDSNAPKRP---LSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSE 86
E A K+K + PK+P L++Y +F++ R+ K+ P+ S K ++WK+MS
Sbjct: 10 EPAIKRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSA 69
Query: 87 AEKAPYVQKALNKKAEYELALEAY 110
EK+ + + + K YE ++ Y
Sbjct: 70 KEKSKFEELSKEDKKRYESEMKDY 93
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +FIF R +E P S+ + K G+KW +M EK PY Q+A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECP-GLSIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 98 NKKAEYELALEAYK 111
K +Y+ + AY+
Sbjct: 166 KLKEKYKKDVAAYR 179
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 31 EKAGKKKDSNAPKRP---LSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSE 86
E A K+K + PK+P L++Y +F++ R+ K+ P+ S K ++WK+MS
Sbjct: 10 EPAIKRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSA 69
Query: 87 AEKAPYVQKALNKKAEYELALEAY 110
EK+ + + + K YE ++ Y
Sbjct: 70 KEKSKFEELSKEDKKRYESEMKDY 93
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +FIF R +E P S+ + K G+KW +M EK PY Q+A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECP-GLSIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 98 NKKAEYELALEAYK 111
K +Y+ + AY+
Sbjct: 166 KLKEKYKKDVAAYR 179
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
Length = 101
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
+KKD NAPKR LSAY F + R K P N + +GK G+KWK+++ EK PY
Sbjct: 13 RKKDPNAPKRGLSAYMFFANENRDIVKAENP-NITFGQVGKVLGEKWKALTAEEKEPYEA 71
Query: 95 KALNKKAEYELALEAY 110
KA K YE E Y
Sbjct: 72 KAKADKKRYESEKELY 87
>gi|119596659|gb|EAW76253.1| hCG2042470 [Homo sapiens]
Length = 118
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 34 GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYV 93
G K D NAPKRPLS +F+F +F K + P S+ + K G+ W +++++EK PYV
Sbjct: 9 GGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYV 67
Query: 94 QKALNKKAEYELALEAYKKQLNDNGA-GVSEDSW 126
K + K +YE + YK + +G G ++ +W
Sbjct: 68 TK-VAKLKKYEKDVADYKSKGKLDGTKGPAKVAW 100
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|268565525|ref|XP_002639471.1| Hypothetical protein CBG04066 [Caenorhabditis briggsae]
Length = 689
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PKR +AYF++ R S KE D +V + K GG KWK MS +K + QKA
Sbjct: 554 DPNEPKRAATAYFLWFNANRASLKE---DGDTVPEVAKKGGAKWKEMSADDKKEWEQKAA 610
Query: 98 NKKAEYELALEAYKKQLNDNGAGVS 122
K YE ++ YKK NG G S
Sbjct: 611 QDKIRYENEMKEYKK----NGGGSS 631
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAA 146
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 147 KLKEKYEKDVADYK 160
>gi|115445389|ref|NP_001046474.1| Os02g0258200 [Oryza sativa Japonica Group]
gi|113536005|dbj|BAF08388.1| Os02g0258200, partial [Oryza sativa Japonica Group]
Length = 269
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
+P+SAYF++ + R + + K+V +G+ G++WK+MSEAEKAP+ A ++ EY
Sbjct: 52 QPMSAYFVYTQQRRAAL---VAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 108
Query: 104 ELALEAYKKQ 113
++ + AY+++
Sbjct: 109 QVEMAAYRQR 118
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 1 MKGPRVVAVAQKKPHADMLKARKAENKPKK-EKAGKKKDSNAPKRPLSAYFIFMEDFRKS 59
MK + + +K+ +++K K E + KK A D N PK+P S++ +F ++ R+
Sbjct: 137 MKQEALQLLKKKEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKEARRQ 196
Query: 60 FKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
E P S + + KWK + EAEK + KA A Y+ +E Y K
Sbjct: 197 LAEERPGVAS-STLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDMEEYTK 248
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +FIF R +E P S+ + K G+KW +M EK PY Q+A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECP-GLSIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 98 NKKAEYELALEAYK 111
K +Y+ + AY+
Sbjct: 166 KLKEKYKKDVAAYR 179
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 31 EKAGKKKDSNAPKRP---LSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSE 86
E A K+K + PK+P L++Y +F++ R+ K+ P+ S K ++WK+MS
Sbjct: 10 EPAIKRKMARDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSA 69
Query: 87 AEKAPYVQKALNKKAEYELALEAY 110
EK+ + + + K YE ++ Y
Sbjct: 70 KEKSKFEELSKEDKKRYESEMKDY 93
>gi|49258307|pdb|1J3D|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 78
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QK
Sbjct: 2 KKDPNAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQK 60
Query: 96 ALNKKAEYELALEAYK 111
A K +YE + AY+
Sbjct: 61 AAKLKEKYEKDIAAYR 76
>gi|384491112|gb|EIE82308.1| hypothetical protein RO3G_07013 [Rhizopus delemar RA 99-880]
Length = 425
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP +P SAY +F D R K N S A + K G +WK++S E
Sbjct: 173 RKYRRHAKPDRNAPIKPPSAYVMFSNDARAKLKNQ---NLSFAELAKVVGDQWKNLSYYE 229
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K Y +KA K EY ALE Y++
Sbjct: 230 KQAYERKATRAKDEYLAALEHYRQ 253
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+KD NAPKRP SA+F+F + R K P S+ K G+ W + +K P+ Q
Sbjct: 86 KRKDPNAPKRPPSAFFLFCSEHRPKIKSDHP-GLSIGDTAKKLGEMWSLQTAKDKLPFEQ 144
Query: 95 KALNKKAEYELALEAYK 111
KAL K +Y+ + AY+
Sbjct: 145 KALKLKEKYDKDIAAYR 161
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++W++MS EK +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA Y+ ++ Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|58268918|ref|XP_571615.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112618|ref|XP_774852.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818300|sp|P0CO25.1|NHP6_CRYNB RecName: Full=Non-histone chromosomal protein 6
gi|338818301|sp|P0CO24.1|NHP6_CRYNJ RecName: Full=Non-histone chromosomal protein 6
gi|50257500|gb|EAL20205.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227850|gb|AAW44308.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 116
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR LSAY F++D+R+ K P+ + +GK G KW+ M+E EK PY K
Sbjct: 22 KKDPNKPKRALSAYMFFVQDYRERIKTENPE-ATFGDVGKLLGIKWREMNENEKKPYEAK 80
Query: 96 A 96
A
Sbjct: 81 A 81
>gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757), partial [Gallus gallus]
Length = 669
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
++K RK K + K GK D N PKRP+SAY +++ R+ K P S+ + K
Sbjct: 486 IVKDRKPRKKQVESKKGK--DPNVPKRPMSAYMLWLNANREKIKSDHP-GISITDLSKKA 542
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G+ WK+MS+ +K + +KA + K +YE A++ Y
Sbjct: 543 GELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEY 575
>gi|57232750|ref|NP_660206.2| high mobility group protein B4 [Homo sapiens]
gi|387912835|sp|Q8WW32.2|HMGB4_HUMAN RecName: Full=High mobility group protein B4
gi|189065201|dbj|BAG34924.1| unnamed protein product [Homo sapiens]
gi|208968483|dbj|BAG74080.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D P+RP S++ +F +D K P N SV + KA G+ W + ++ EK PY Q+
Sbjct: 89 DPQEPRRPPSSFLLFCQDHYAQLKRENP-NWSVVQVAKATGKMWSTATDLEKHPYEQRVA 147
Query: 98 NKKAEYELALEAYKKQLN 115
+A+Y LE Y+KQ N
Sbjct: 148 LLRAKYFEELELYRKQCN 165
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|301097589|ref|XP_002897889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106637|gb|EEY64689.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 210
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKR LSAYF F D R+ ++ P NK + + +KW+++ + ++A Y +
Sbjct: 110 KKKDPNAPKRALSAYFFFCNDIRQEVRDENP-NKKITEIATLLAEKWRALPDKKRAKYQK 168
Query: 95 KALNKKAEYELALEAYKKQ 113
K +Y+ ++ Y Q
Sbjct: 169 MNEEAKVKYQQQMDVYNAQ 187
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 24 AENKPKK-----EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGG 78
A +PKK K KKKD NAPKR LSA+ F D R + K+ PD + + + G
Sbjct: 6 AVGRPKKNGDHTRKPRKKKDKNAPKRALSAFMFFSNDIRDTVKKEMPDLQFL-EISSEIG 64
Query: 79 QKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
++WK +S+ ++ PY + A K Y+ E Y
Sbjct: 65 RRWKQISDEDRRPYDELAAADKRRYQEEKEDY 96
>gi|449681405|ref|XP_002159252.2| PREDICTED: FACT complex subunit SSRP1-like [Hydra magnipapillata]
Length = 774
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVA--AMGKAGGQKWKSMSEAEKAPYVQK 95
D NAPKRP+SA+ ++M + R+ K DN +A + K GG++WK+++ +K +
Sbjct: 543 DENAPKRPMSAFMLYMNEVREKIK---ADNPGIAFTDIAKKGGEQWKTLT--DKTKWENM 597
Query: 96 ALNKKAEYELALEAYKKQLNDNGAGVSE 123
A K +Y + AY K + D GA + +
Sbjct: 598 AKEAKNKYTIDFAAYSKTIKDGGAAIKD 625
>gi|302851253|ref|XP_002957151.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
gi|300257558|gb|EFJ41805.1| hypothetical protein VOLCADRAFT_77427 [Volvox carteri f.
nagariensis]
Length = 94
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPK+PL AY F +D R+ K P SV +GK G+ WK +SE +K Y++
Sbjct: 17 KVKDPNAPKKPLGAYMWFCKDMRERVKAENP-GMSVTDIGKRLGELWKEVSEEDKKKYLK 75
Query: 95 KALNKKAEYELALEAYKKQ 113
+A + K Y AY K+
Sbjct: 76 QAEDDKERYNKEAAAYNKE 94
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSA+F F D R ++ P+ K V + + G+ WK++ E E+A Y +K
Sbjct: 109 KKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWK-VGQVAQELGRFWKALGEEERAVYERK 167
Query: 96 ALNKKAEYELALEAYK 111
AL K Y + YK
Sbjct: 168 ALEDKERYAEEMRNYK 183
>gi|402220154|gb|EJU00226.1| Non-histone chromosomal protein 6 [Dacryopinax sp. DJM-731 SS1]
Length = 97
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K + A+ P + K G KKD +APKR LSAY IF ++R K PD S +G+
Sbjct: 1 MPKVKSADAAPHR-KRGSKKDKDAPKRGLSAYLIFSNEWRDRVKAENPDA-SFGDVGRLL 58
Query: 78 GQKWKSMSEAEKAPYV-------QKALNKKAEYE 104
G KWK + + EK Y Q+A +KAEYE
Sbjct: 59 GAKWKELPDEEKKEYQRKSDEDKQRAAKEKAEYE 92
>gi|384488337|gb|EIE80517.1| hypothetical protein RO3G_05222 [Rhizopus delemar RA 99-880]
Length = 466
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKES-FPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAP +P+SAY +F D R K+ P + K G +WK++ E E+ Y +
Sbjct: 217 KKDRNAPIKPMSAYIMFSSDIRTGLKDRKLP----FEEVSKIIGDQWKALDEGERQAYER 272
Query: 95 KALNKKAEYELALEAYKK 112
A+ K EY +AL+ Y++
Sbjct: 273 MAMRAKDEYLVALKEYRQ 290
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK +K + KD NAPKRP SA+F+F DFR K P S+ K G+ W S S
Sbjct: 80 PKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESP-GLSIGDTAKKLGEMWNSSSAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + AY+
Sbjct: 139 EKQPYEKKAAKLKEKYDKDIVAYR 162
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 96 ALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
DML+ RK KKD NAPKR LSA+F F D R ++ P+ K V + +
Sbjct: 122 DMLRKRKR----------VKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWK-VGQVAQE 170
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
G+ WK++S+ E+ Y +KAL K Y + YK+
Sbjct: 171 LGRYWKALSDEERMVYERKALEDKERYAEEMRNYKQ 206
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYNNKAA 144
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 145 KLKEKYEKDVADYK 158
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAILKEKYEKDIAAYR 163
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQD 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MAKADKVHYEREMKTY 78
>gi|255637700|gb|ACU19173.1| unknown [Glycine max]
Length = 478
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
P+ P+SAYF+F D R + +NK+ + K ++WK+M+E +K PY + A K
Sbjct: 267 PRHPMSAYFLFTNDRRAALA---AENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKKNKE 323
Query: 102 EYELALEAYKKQLNDNGA 119
+Y L +EAYK++ ++ A
Sbjct: 324 QYALEMEAYKQKKDEEAA 341
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D N PK+P S++ + ++ RK+ +E P S + + KWK +SE ++ + +A
Sbjct: 392 DPNRPKKPASSFILLSKEARKTLQEERP-GISTSTLNALVSLKWKELSEEDRQFWNGQAS 450
Query: 98 NKKAEYELALEAYKKQLND 116
A++AYKK+L +
Sbjct: 451 K-------AMDAYKKELEE 462
>gi|355766483|gb|EHH62519.1| hypothetical protein EGM_20887 [Macaca fascicularis]
Length = 198
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
DSNAPKRP S +F+F F K + P S+ M K G+ WK+++++EK PY+ KA
Sbjct: 76 DSNAPKRPPSGFFLFSSKFCPKMKSTNP-GISIGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 98 NKKAEYE 104
K +YE
Sbjct: 135 KLKDKYE 141
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYERKAAKLKGKYEKDTAAYR 163
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDRKKPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|449501868|ref|XP_004174468.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1
[Taeniopygia guttata]
Length = 705
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 25 ENKPKKEK--AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
+ KP+K++ + K KD NAPKRP+SAY +++ R+ K P S+ + K G+ WK
Sbjct: 526 DRKPRKKQPESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHP-GISITDLSKKAGELWK 584
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAY 110
+MS+ +K + +KA + + +YE A++ Y
Sbjct: 585 AMSKEKKEEWDRKAEDARRDYEKAMKEY 612
>gi|313224350|emb|CBY20139.1| unnamed protein product [Oikopleura dioica]
Length = 91
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKRP +A+F+F D R K+ P+ V+ + K G WK + K Y +
Sbjct: 5 KKDPNAPKRPQTAFFLFAADNRADAKKCLPEGSRVSEVAKKLGVMWKEVDAKTKEKYQSQ 64
Query: 96 ALNKKAEYELALEAYK 111
A KA+Y +EAY+
Sbjct: 65 AEENKAKYAEEMEAYR 80
>gi|312075672|ref|XP_003140521.1| high mobility group protein 1.2 [Loa loa]
gi|307764316|gb|EFO23550.1| high mobility group protein 1.2 [Loa loa]
Length = 211
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSA+F F D R ++ P+ K V + + G+ WK++ E E+A Y +K
Sbjct: 91 KKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWK-VGQVAQELGRFWKALGEEERAVYERK 149
Query: 96 ALNKKAEYELALEAYK 111
AL K Y + YK
Sbjct: 150 ALEDKERYAEEMRNYK 165
>gi|388582419|gb|EIM22724.1| hypothetical protein WALSEDRAFT_53977 [Wallemia sebi CBS 633.66]
Length = 137
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 23 KAENKPK---KEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQ 79
KA+ KP+ K+ A KKD NAPKR LSAY ++ R K+ P N S +GK G
Sbjct: 3 KADTKPRANTKKAAKPKKDENAPKRALSAYMYMSQEHRAEVKKENP-NISFGEVGKVLGA 61
Query: 80 KWKSMSEAEKAPYVQKA 96
KWK MS EK PY ++A
Sbjct: 62 KWKEMSAEEKKPYEEQA 78
>gi|168021929|ref|XP_001763493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685286|gb|EDQ71682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK P+SA+F F + R + E +NK V + K G++WKSMS +++AP+ + A
Sbjct: 259 DPLRPKHPISAFFAFSQSRRPALLE---ENKPVTEIAKILGEEWKSMSPSKRAPFEEIAA 315
Query: 98 NKKAEYELALEAYKK 112
+K Y + LE YKK
Sbjct: 316 KEKERYSVELETYKK 330
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
K+P +A+ ++ +D+R+ E P N + A + G KWK++ E E+ PY
Sbjct: 143 RLKKPKTAFLLWCKDYRQKVCEENP-NATFAEISTILGDKWKNVPEEERKPY 193
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A K KP+K +A KKD APKR LSAY F + R + +E P + +GK G++
Sbjct: 5 ATKKSAKPEKRRA--KKDPMAPKRGLSAYMFFANEQRDNVREENP-GVTFGQVGKILGER 61
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
WK++S+ ++APY KA K YE AY+
Sbjct: 62 WKALSDKQRAPYDAKAAADKKRYEDEKAAYQ 92
>gi|405121060|gb|AFR95829.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 116
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR LSAY F++D+R+ K P+ + +GK G KW+ M+E EK PY K
Sbjct: 22 KKDPNKPKRALSAYMFFVQDYRERIKAENPE-ATFGDVGKLLGIKWREMNENEKKPYEAK 80
Query: 96 A 96
A
Sbjct: 81 A 81
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF DFR K P ++ + K G+ W
Sbjct: 80 PKGEKKKRFKDPNAPKRPPSAFFIFCADFRAKVKGETP-GLTIGDVAKKLGEMWNGTCAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKQPYEKKAAKLKEKYEKDIAAYR 162
>gi|313225328|emb|CBY06802.1| unnamed protein product [Oikopleura dioica]
Length = 448
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 61/140 (43%), Gaps = 50/140 (35%)
Query: 31 EKAGKKK--DSNAPKRPLSAYFIFMEDFRKSFK--------ESFPDNKSVAAM------- 73
EKA +KK D PKRP SAYF+F++DFR ++K ES +N++ +
Sbjct: 140 EKAAEKKPKDQWRPKRPPSAYFLFLKDFRANWKIDSANDTAESEDENENKLDIKNEDDED 199
Query: 74 ---------------------------------GKAGGQKWKSMSEAEKAPYVQKALNKK 100
K G KW SMSE EKAPYV KAL +
Sbjct: 200 RAKLSICENENEPQKKIKIDDDKAKKLNPQKEITKRAGSKWNSMSEEEKAPYVAKALETR 259
Query: 101 AEYELALEAYKKQLNDNGAG 120
++E L+ YK ++ + G
Sbjct: 260 VKWEKQLQIYKNEIKNGKTG 279
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 43 KRPLSAYFIFMEDFRKSFK---ESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KRP +AY F+ +R+ K S P K M + KW++MS+ EK PY + A
Sbjct: 69 KRPTTAYLYFVSKYREEVKNAGNSMP--KQAKEMMQECAAKWRAMSDDEKKPYHELA 123
>gi|351707228|gb|EHB10147.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 709
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 16 ADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
A + K RK+ K + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 523 AKVAKDRKSRKKTVEAKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSK 579
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
G+ WK M + +K + KA + + EYE A++ Y+
Sbjct: 580 KAGEIWKGMPKEKKEEWDHKAEDARREYEKAMKEYE 615
>gi|357517687|ref|XP_003629132.1| HMG1/2-like protein [Medicago truncatula]
gi|355523154|gb|AET03608.1| HMG1/2-like protein [Medicago truncatula]
Length = 75
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 10 AQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS 69
A KP + LK RK +K+ KD N PKRP SA+F+FM DFR+ +K+ P+NKS
Sbjct: 6 ADSKPADNRLK-RKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKS 64
Query: 70 VAAM 73
VAA+
Sbjct: 65 VAAL 68
>gi|356498002|ref|XP_003517844.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
13-like [Glycine max]
Length = 302
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK P+SAYF+F D R + +NK+ + K ++WK+M+E +K PY + A K
Sbjct: 123 PKHPMSAYFLFTNDRRAALA---AENKNFLEVPKITFEEWKNMTEEQKRPYEEMAKKNKE 179
Query: 102 EYELALEAYKKQLNDNGAG 120
+Y L +EAY KQ D AG
Sbjct: 180 QYALEMEAY-KQKKDEEAG 197
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K+ DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 38 KTMSAKEKRKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 97
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
K P S+ + K G+ W + + +K PY +KA K ++E + AY+ +
Sbjct: 98 CPKIKGEHP-GLSIGDVAKKLGELWNNTAAEDKQPYGKKAAKLKEKHEKGIAAYRAKGKP 156
Query: 117 NGA 119
N A
Sbjct: 157 NAA 159
>gi|67475910|ref|XP_653586.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470556|gb|EAL48200.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703217|gb|EMD43706.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica KU27]
Length = 111
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
N PKRP + YF+++ + R S KE PD K V + K ++WK++ E EK Y KA
Sbjct: 24 NRPKRPPTPYFLYLNEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQTKADAA 82
Query: 100 KAEYELALEAY 110
K +Y+ +E Y
Sbjct: 83 KEQYKKDIEKY 93
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 23 KAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWK 82
K E+K + +K KD NAPKR LSA+F F D R K P+ V + K G+KW
Sbjct: 316 KGESKGRGKKRKHIKDLNAPKRSLSAFFWFCSDERGKVKMLNPEF-GVGDIAKELGKKWS 374
Query: 83 SMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNG--AGVSEDSWKSTSE 131
K+ Y A KA YE + AYKK++ D GV ++ KS SE
Sbjct: 375 DADPETKSKYEAMAEKDKARYEREMTAYKKKMKDGAPVVGVPANTVKSDSE 425
>gi|344305949|ref|XP_003421652.1| PREDICTED: TOX high mobility group box family member 4-like
[Loxodonta africana]
Length = 619
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
+++A K + PKK + KKD N P++P+SAY +F D + + K P N + + K
Sbjct: 202 VVEAGKKQKAPKKRR---KKDPNEPQKPVSAYALFFRDTQAAIKGQNP-NATFGEVSKIV 257
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
W S+ E +K Y +K K EY AL AYK
Sbjct: 258 ASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYK 291
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+ EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P ++ + K G+ W ++S++EK PY K
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GITIGDVAKKLGEMWNNLSDSEKQPYNNKGA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|302755040|ref|XP_002960944.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
gi|300171883|gb|EFJ38483.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
Length = 457
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+KD PKRP + Y + E+ R + +N V +GK G++W+SM E +APY +
Sbjct: 243 KEKDPEKPKRPTTGYMAYSEERRPAL---MNENLKVPQIGKILGEEWRSMDEKARAPYEK 299
Query: 95 KALNKKAEYELALEAYKKQ 113
A + KA Y +EAY K+
Sbjct: 300 IATDAKATYLTEMEAYNKK 318
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A KAE P+K KA K + PK+ +AY +F ++RK + P K A + K
Sbjct: 354 AMKAEKAPRKAKA-KTAEPGKPKKAATAYILFGMEYRKKLQAEMPTAK-FAELTALVASK 411
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND--NGAGVS 122
W M EK PYV +A +K +Y+ A+E +K+ D +GA S
Sbjct: 412 WNEMGAEEKQPYVNQAGVEKLKYQEAMEEFKRLSPDPKDGATTS 455
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D K+PLS+YF++ D R+ + P N + + G+ WKS+SE EK PY +
Sbjct: 126 DPERIKKPLSSYFLWCNDQREKVRAQNP-NAGIKELSSIFGELWKSVSEEEKKPYEEI-- 182
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQVSSY 157
Y+ E Y KQL G K E ++ K + DE ++ S ++
Sbjct: 183 -----YQKNKEEYLKQL----VG------KEKREAEALKL----LQDEKNRKLSKEILDQ 223
Query: 158 FMGFYCFSSRN 168
FM + F ++N
Sbjct: 224 FMEYKKFDAQN 234
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P ++ + K G+ W ++S++EK PY+ K
Sbjct: 108 DPNAPKRPPSGFFLFCSEFRPKIKSTKP-GITIGDVAKKLGEMWNNLSDSEKQPYITKVA 166
Query: 98 NKKAEYELALEAYK 111
K ++E + YK
Sbjct: 167 KLKEKHEKDVADYK 180
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD N PKR LSAY F++D+R+ K P+ + +GK G KW+ M+E EK PY K
Sbjct: 22 KKDPNKPKRALSAYMFFVQDYRERIKAENPEA-TFGDVGKLLGIKWREMNENEKKPYEAK 80
Query: 96 A 96
A
Sbjct: 81 A 81
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 32 KAGKKK-DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
K GKK+ D + PK+PLS Y + + R+ K+ P+ K + + K G+KWK +SE EK
Sbjct: 15 KRGKKEVDPDKPKKPLSGYMRYCNEQREQVKKENPELK-LTEISKVLGEKWKELSEEEKK 73
Query: 91 PYVQKALNKKAEYELALEAYKK 112
PY K +Y+L +E YKK
Sbjct: 74 PYQDAYEADKEKYDLQMEEYKK 95
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 7 VAVAQKKPHADMLKARKA------ENKPKKEKAGKKK-DSNAPKRPLSAYFIFMEDFRKS 59
++ +KKP+ D +A K E K GKK D N PKRPLS+Y IF D R+
Sbjct: 67 LSEEEKKPYQDAYEADKEKYDLQMEEYKKTHPTGKKNADPNKPKRPLSSYIIFSNDKREE 126
Query: 60 FKESFPD--NKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
K PD NK + + G+ WK + E EK Y ++ +K YE + Y+++
Sbjct: 127 VKRKNPDMSNKEITTL---LGKMWKELPEEEKQEYEKQHAEEKKAYEEKMGEYRRE 179
>gi|358055220|dbj|GAA98989.1| hypothetical protein E5Q_05678 [Mixia osmundae IAM 14324]
Length = 327
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFK----ESFPDNKSVAAMGKAGGQKWKSMSEA 87
+ G +D +APKRP +A+F+F+ R +S P + + AG +WK MS+A
Sbjct: 240 RIGNLRDPDAPKRPSTAFFLFLTRGRNDPSSVGLQSLPGKTTEQTVVLAG--RWKEMSDA 297
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQL 114
EK PYV AL + EY+ A Y+ L
Sbjct: 298 EKEPYVSDALRLREEYKQASARYESSL 324
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
Length = 103
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
+KKD NAPKR LSAY F + R+ ++ P + A+G+ G+ WK +S++E+ PY
Sbjct: 18 RKKDPNAPKRGLSAYMFFANENRERVRDENP-GIAFGALGRKLGELWKGLSDSERKPYED 76
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 77 KAAADKKRYE 86
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K+ DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 50 KTMSAKEKRKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
K P S+ + K G+ W + + +K PY +KA K ++E + AY+ +
Sbjct: 110 CPKIKGEHP-GLSIGDVAKKLGELWNNTAAEDKQPYGKKAAKLKEKHEKGIAAYRAKGKP 168
Query: 117 NGA 119
N A
Sbjct: 169 NAA 171
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NA KRP S +F+F +FR K + P S+ + K G+ W +++++EK PY+ KA
Sbjct: 89 DPNASKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
K EK KKD APKR LSAY F + R++ +E P S +GK G++WK++S+ +
Sbjct: 11 KTEKRRGKKDPLAPKRGLSAYMFFANEQRENVREENP-GVSFGQVGKILGERWKALSDKQ 69
Query: 89 KAPYVQKALNKKAEYELALEAY 110
+APY KA K YE AY
Sbjct: 70 RAPYDAKAAADKKRYEDEKAAY 91
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + S
Sbjct: 81 PKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTSSE 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K P+ +KA K +YE + AY+
Sbjct: 140 DKQPFEKKAGKLKEKYEKDIAAYR 163
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MARADKVRYEREMKTY 78
>gi|357165293|ref|XP_003580334.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 135
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
PKR + +F F+ +FR + E P+ K VAA+ KA G+KW+SMS+ EKA Y
Sbjct: 27 PKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKWRSMSDEEKAKY 77
>gi|294463267|gb|ADE77169.1| unknown [Picea sitchensis]
Length = 482
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 30 KEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KEK+ +K KD + PK P++A+F F + R + E +N +V + K G++WK+M++ E
Sbjct: 240 KEKSKRKEKDPSKPKHPVTAFFAFTNERRAALLE---ENHNVLQIAKILGEEWKNMTKEE 296
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
+APY Q A K +Y +E YK+
Sbjct: 297 RAPYEQIAAEAKEKYMGEMELYKQ 320
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPY 92
K D N PK+P +++ +F ++ RK + P +N ++ A+ KWK + AEK +
Sbjct: 374 KNSDPNRPKKPPTSFLLFSKETRKKLVQERPGVNNTTINAL---ISLKWKDLGTAEKQKW 430
Query: 93 VQKALNKKAEYELALEAYKK 112
V +A +Y+ +E Y K
Sbjct: 431 VDEAAGAMVQYKKEVEEYNK 450
>gi|71662243|ref|XP_818131.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70883364|gb|EAN96280.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPKR +SAYF F+ DFRK PD SV KA G WK++S+ K PY
Sbjct: 198 KAKDENAPKRSMSAYFFFVSDFRK----KHPDL-SVTETSKAAGAAWKALSDDMKKPYEA 252
Query: 95 KALNKKAEYELALEA 109
A K Y+ + A
Sbjct: 253 MAQKDKERYQREMAA 267
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KK + PK LS Y +F D R KE P K+ + ++ G+ W S+A K Y +
Sbjct: 109 KKPDDYPKAALSPYILFGNDHRDKVKEQNPGMKNTEIL-QSLGKMWAEASDAVKEKYKKL 167
Query: 96 ALNKKAEYELALEAYKK 112
A + K ++ L YKK
Sbjct: 168 AEDDKKRFDRELSEYKK 184
>gi|336465411|gb|EGO53651.1| hypothetical protein NEUTE1DRAFT_106544 [Neurospora tetrasperma
FGSC 2508]
gi|350295304|gb|EGZ76281.1| hypothetical protein NEUTE2DRAFT_122932 [Neurospora tetrasperma
FGSC 2509]
Length = 592
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 12 KKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVA 71
++P M+ RK PK D NAP+RP SAY +F R+ K N S
Sbjct: 101 REPGTVMVTKRKYRRHPKA-------DENAPERPPSAYVLFSNKMREDLKGR---NLSFT 150
Query: 72 AMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
+ K G+ W++++ AEK PY KA K +Y L YKK
Sbjct: 151 EIAKLVGENWQNLTPAEKEPYESKAQAYKEKYHAELAEYKK 191
>gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana]
gi|46367464|emb|CAG25858.1| hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK+P+SAY I+ + R + K +NKSV + K G++WK++SE +KAPY + A
Sbjct: 246 DPLKPKQPISAYLIYANERRAALK---GENKSVIEVAKITGEEWKNLSEEQKAPYDKMAK 302
Query: 98 NKKAEYELALEAYKK 112
K Y +E YK+
Sbjct: 303 KNKEIYLQEMEGYKR 317
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 16/95 (16%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKW 81
A+NK K E D N PK+P S+YF+F +D RKS E P +N +V A KW
Sbjct: 362 AKNKKKNENV----DPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTA---HITLKW 414
Query: 82 KSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+ E EK Y KA +EAYKK++ +
Sbjct: 415 MELGEEEKQVYNSKAA-------ALMEAYKKEVEE 442
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY + A K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKXAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 25 ENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
E KP+++K K++D+N PKRP SAYF+++ + R K+ P + S+ + K G+ WK +
Sbjct: 546 ERKPRRQK--KERDANKPKRPPSAYFLWLAENRDKIKKDNP-SFSITDVTKRAGELWKEV 602
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSED 124
+ +K+ + Q+A+ A+Y+ A+ AY+ L++ S+D
Sbjct: 603 T--DKSKWEQQAVEAAAKYKEAMAAYQASLSNRPQNDSDD 640
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F D R KE P S+ + K G+ W + + +K PY +A
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRPRIKEENP-GISIGDIAKKLGEFWSTQTSKDKVPYEARAG 150
Query: 98 NKKAEYELALEAYK 111
K +YE + AYK
Sbjct: 151 KLKEKYEKDVAAYK 164
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD N P+ S+Y F+ R+ K+ P + A K ++WK+MS EK +
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDL 62
Query: 96 ALNKKAEYELALEAY 110
A N K YE ++ Y
Sbjct: 63 AKNDKVRYEREMKTY 77
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 50 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
R K P S+ + K G+ W + + +K PY +KA K +YE+ + AY+
Sbjct: 110 RPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEMDIAAYR 163
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++++ EK PY KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDGEKQPYNNKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|344252855|gb|EGW08959.1| TRAF family member-associated NF-kappa-B activator [Cricetulus
griseus]
Length = 427
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R FK P S+ + K G+ W + +
Sbjct: 294 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKFKGEHP-GLSIGDVAKKLGEMWNNTAAD 352
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K ++E + AY+
Sbjct: 353 DKQPYEKKAAKLKEKHEKDIAAYR 376
>gi|358337037|dbj|GAA55457.1| structure-specific recognition protein 1 [Clonorchis sinensis]
Length = 723
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+PKK++ KD NAP RP +AY ++ + R +S + SVA + KA G++W+++
Sbjct: 567 RPKKKRV---KDPNAPSRPPTAYIMWFNEHRDEISKSIGNPTSVAEVAKAAGERWRNIDS 623
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEI 142
KA Y + K YE + Y+ ++ +G V+ + K T ++ K S+ ++
Sbjct: 624 ETKAKYQARVDELKKNYESEMRIYRNKIA-SGELVAPSTSKVTKAPRTSKPSAPKV 678
>gi|440298630|gb|ELP91261.1| HMG (high mobility group) box domain containing protein, partial
[Entamoeba invadens IP1]
Length = 214
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 33 AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
A K+D N PK+P++ Y +F+ + R+ F+E FP+ K + + K + W+ M E +K Y
Sbjct: 109 AITKQDPNLPKKPMTPYLMFLNEHREEFREKFPELK-ITEIAKKAAEIWRDMKEEDKQVY 167
Query: 93 VQKALNKKAEYELALEAYKKQLN 115
+ KA +Y ++ Y ++ N
Sbjct: 168 LDKAKKATEKYLEEMKTYNERNN 190
>gi|429855216|gb|ELA30184.1| hmg box protein [Colletotrichum gloeosporioides Nara gc5]
Length = 468
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R K N + + K G+ W++++ AE
Sbjct: 103 RKYRRHPKPDENAPERPPSAYVLFSNKMRDELKGR---NLTFTEIAKLVGEHWQNLTPAE 159
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY AL K +Y L YKK
Sbjct: 160 KEPYETSALKAKEKYNHDLAEYKK 183
>gi|441639466|ref|XP_004090212.1| PREDICTED: high mobility group protein B3-like [Nomascus
leucogenys]
Length = 131
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAP+RPLS +F+F +F K + P S+ + K G+ W +++++EK PYV K +
Sbjct: 27 DPNAPQRPLSGFFLFCSEFCPEIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYVTK-V 84
Query: 98 NKKAEYELALEAYK-KQLNDNGAGVSEDSW 126
K +YE + YK K DN G ++ +W
Sbjct: 85 AKLKKYEKDVADYKSKGKLDNAKGPAKVAW 114
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NA KRP S +F+F +F K + P S+ + K G+ W +++++EK PY+
Sbjct: 86 KKKDPNATKRPPSGFFLFCSEFHPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYIT 144
Query: 95 KALNKKAEYELALEAYK 111
KA K +YE + A K
Sbjct: 145 KAAKLKEKYEKDVAASK 161
>gi|269861952|ref|XP_002650646.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|269866178|ref|XP_002652183.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|209779275|gb|ACI87872.1| high mobility group protein [Enterocytozoon bieneusi]
gi|220063003|gb|EED41873.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|220065832|gb|EED43409.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
Length = 171
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPK+P S+Y +F + RK+ ++ V K G++W +++EAEK+ Y +
Sbjct: 7 KPKDKNAPKKPCSSYMLFGHELRKN--DATIKALKVTEQAKQIGERWNALTEAEKSEYEK 64
Query: 95 KALNKKAEYELALEAYK 111
KA+ K +Y LE YK
Sbjct: 65 KAMEAKEKYNKELEIYK 81
>gi|344253440|gb|EGW09544.1| High mobility group protein B1 [Cricetulus griseus]
Length = 169
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 5 RVVAVAQKKPHADMLKARKAENK-------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFR 57
+ ++ +K DM KA KA + PK E K KDSNAPKRP SA+F+F ++
Sbjct: 50 KTMSAKEKGKFEDMAKAGKAHYEREMKTYIPKGETKKKFKDSNAPKRPPSAFFLFCSEYC 109
Query: 58 KSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLN 115
K P S+ + K G+KW + + +K PY +KA K +YE + AY+ + N
Sbjct: 110 PKIKGEHP-GLSLGDVAKKLGEKWNNTAAGDKQPYEKKAAKLKEKYEKDIVAYRAKGN 166
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+FIF +FR K P ++ + K G+ W + + +K PY +KA
Sbjct: 95 DPNAPKRPPSAFFIFCSEFRPKVKGEHP-GLTIGEVAKKLGELWNNTNSEDKQPYEKKAS 153
Query: 98 NKKAEYELALEAYKKQLNDNGAG 120
K +YE + AY +Q G+G
Sbjct: 154 KLKEKYEKDVAAY-RQKTKGGSG 175
>gi|384493812|gb|EIE84303.1| hypothetical protein RO3G_09013 [Rhizopus delemar RA 99-880]
Length = 252
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 30 KEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
K+K +K+D + PK+P S Y + R + FP + S K G++WK +S+AEK
Sbjct: 49 KDKGKRKRDPDFPKQPTSNYLFYCNSIRADVDKEFP-SASFVEKSKIYGERWKKLSDAEK 107
Query: 90 APYVQKALNKKAEYELALEAYKK 112
PY + A +K Y LE Y+K
Sbjct: 108 KPYNEMAQKEKERYNRELETYEK 130
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 50 KTISAEEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
R K P S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 110 RPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDITAYR 163
>gi|339250984|ref|XP_003372975.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316969210|gb|EFV53345.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 599
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSA+F F R ++S PD K V + + G+ WK++++ +K Y +
Sbjct: 90 KKDPNAPKRALSAFFFFSHAERPEVQKSHPDWK-VGQLAQELGRMWKALNDEQKRKYEEM 148
Query: 96 ALNKKAEYELA 106
A+ KA YEL
Sbjct: 149 AIKDKARYELV 159
>gi|70953373|ref|XP_745792.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56526224|emb|CAH87922.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 98
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D APKR LSAY +++D R + P+ K VA +GK G+ W ++ A+KAPY +KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 97 LNKKAEYELALEAYKK 112
K Y +E YKK
Sbjct: 80 ELDKVRYSKEIEEYKK 95
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D NAPKR LSAY F + R++ +E P S +GK G++WK++++ ++APY KA
Sbjct: 2 QDPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNDKQRAPYEAKA 60
Query: 97 LNKKAEYELALEAY 110
K YE +AY
Sbjct: 61 AADKKRYEDEKQAY 74
>gi|71416266|ref|XP_810170.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70874664|gb|EAN88319.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPKR +SAYF F+ DFRK PD SV KA G WK +S+ K PY
Sbjct: 198 KAKDENAPKRSMSAYFFFVSDFRK----KHPD-LSVTETSKAAGAAWKELSDEMKKPYEA 252
Query: 95 KALNKKAEYELALEA 109
A K Y+ + A
Sbjct: 253 MAQKDKERYQREMAA 267
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KK + PK LS Y +F D R KE P+ K+ + ++ G+ W S+A K Y +
Sbjct: 109 KKPDDYPKAALSPYILFGNDHRDKVKEQNPEMKNTEIL-QSLGKMWAEASDAVKEKYKKL 167
Query: 96 ALNKKAEYELALEAYKK 112
A + K ++ L YKK
Sbjct: 168 AEDDKKRFDRELSEYKK 184
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 29 KKEKAG-KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
++ K G KKKD NAPKR LSAY F + R + P + +GK G+KWK++
Sbjct: 635 RRTKTGRKKKDPNAPKRSLSAYMFFANEQRDIVRSENPGIQ-FGEIGKLLGEKWKALDAE 693
Query: 88 EKAPYVQKALNKKAEYELA-LEAYKKQ 113
KAPY KA K YEL E +KKQ
Sbjct: 694 GKAPYESKAEEDKKRYELEKAEYFKKQ 720
>gi|393216095|gb|EJD01586.1| hypothetical protein FOMMEDRAFT_90339, partial [Fomitiporia
mediterranea MF3/22]
Length = 150
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR---KSFKESFPDNKSVAAMGKAGG 78
R A+ K K + G KD NAPK+PLSAYF+F++ R + K+ F D K A
Sbjct: 23 RAAQRKAGKSRKGNIKDPNAPKKPLSAYFMFLQHIRADPERVKQVFGDEKETTAQSVLAA 82
Query: 79 QKWKSMSEAEK 89
Q W++M++ ++
Sbjct: 83 QTWRAMTDEDR 93
>gi|186701221|gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK P+SA+ ++ + R + +E D+KSV + K G++WK++S+ +KAPY + A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALRE---DSKSVVEVAKITGEEWKNLSDKKKAPYEEVAK 307
Query: 98 NKKAEYELALEAYKK 112
K Y A+E YK+
Sbjct: 308 KNKETYLQAMEEYKR 322
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S+YF+F +D RK E P +N +V A+ KWK + E EK Y +K
Sbjct: 375 DPNKPKKPASSYFLFSKDERKRLIEERPGTNNSTVTALISV---KWKELGEEEKQVYNKK 431
Query: 96 ALNKKAEYELALEAYKKQ 113
A Y+ +EAY K+
Sbjct: 432 AAKLMEAYKKEVEAYNKK 449
>gi|361130747|gb|EHL02497.1| putative High mobility group protein 20A [Glarea lozoyensis 74030]
Length = 267
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D N P+RP SAY IF R+ K N S + K G+ W++++ AE
Sbjct: 132 RKYRRHPKADENCPERPPSAYVIFSNKMREELKGR---NLSFTEIAKLVGENWQNLAPAE 188
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY Q+A + K Y L YKK
Sbjct: 189 KEPYEQQAFSAKERYNGELAEYKK 212
>gi|269866384|ref|XP_002652255.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|220062869|gb|EED41801.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
Length = 145
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPK+P S+Y +F + RK+ ++ V K G++W +++EAEK+ Y +
Sbjct: 7 KPKDKNAPKKPCSSYMLFGHELRKN--DATIKALKVTEQAKQIGERWNALTEAEKSEYEK 64
Query: 95 KALNKKAEYELALEAYK 111
KA+ K +Y LE YK
Sbjct: 65 KAMEAKEKYNKELEIYK 81
>gi|15236607|ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis thaliana]
gi|7269229|emb|CAB81298.1| 98b like protein [Arabidopsis thaliana]
gi|18377799|gb|AAL67049.1| putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein [Arabidopsis thaliana]
gi|22022506|gb|AAM83212.1| putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 456
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK P+SA+ ++ + R + +E +NKSV + K G++WK++S+ +KAPY + A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALRE---ENKSVVEVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 98 NKKAEYELALEAYKK 112
K Y A+E YK+
Sbjct: 308 KNKETYLQAMEEYKR 322
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S+YF+F +D RK E P +N +V A+ KWK +SE EK Y K
Sbjct: 375 DPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTAL---ISLKWKELSEEEKQVYNGK 431
Query: 96 ALNKKAEYELALEAYKKQ 113
A Y+ +EAY K+
Sbjct: 432 AAKLMEAYKKEVEAYNKK 449
>gi|367006853|ref|XP_003688157.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
gi|357526464|emb|CCE65723.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK +KKD NAPKR +SAY F + R + PD S +G+ G+KW+++++ +
Sbjct: 8 KKRTHRRKKDPNAPKRAMSAYMFFANETRDIVRAENPD-VSFGQIGRLLGEKWRALTDED 66
Query: 89 KAPYVQKALNKKAEYELALEAY 110
K P+ KA K YE E Y
Sbjct: 67 KGPFEAKAQADKKRYESEKELY 88
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S+++K Y+ KA
Sbjct: 89 DPNAPKRPPSRFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSDKQQYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVTDYKSKGKFDGA 169
>gi|334186863|ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 450
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PK P+SA+ ++ + R + +E +NKSV + K G++WK++S+ +KAPY + A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALRE---ENKSVVEVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 98 NKKAEYELALEAYKK 112
K Y A+E YK+
Sbjct: 308 KNKETYLQAMEEYKR 322
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGK 75
MLK ++ + K+K + D N PK+P S+YF+F +D RK E P +N +V A+
Sbjct: 349 MLKKKEKTDNLIKKKKNENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTAL-- 406
Query: 76 AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
KWK +SE EK Y KA Y+ +EAY K+
Sbjct: 407 -ISLKWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKK 443
>gi|213407940|ref|XP_002174741.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002788|gb|EEB08448.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 134
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK + ++KD NAPKR +SA+ F R+ KE P+ + +G G+KWK+++
Sbjct: 2 PKAARKTRRKDPNAPKRNMSAFMFFSMSNREKIKEENPE-ATFGQIGSLLGKKWKTLTAV 60
Query: 88 EKAPYVQKALNKKAEYE 104
EK PY +KA K YE
Sbjct: 61 EKEPYEEKARKDKERYE 77
>gi|410081503|ref|XP_003958331.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
gi|372464919|emb|CCF59196.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
Length = 95
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK +KKD NAPKR LSAY F + R + PD + +G+ G++WK+++ +
Sbjct: 8 KKRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPD-VTFGQIGRILGERWKALNAED 66
Query: 89 KAPYVQKALNKKAEYELALEAY 110
K PY KA K YE E Y
Sbjct: 67 KEPYEAKAAADKKRYESEKELY 88
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKLKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGKMWNNTAAN 139
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQLNDNGA--GVSE 123
+K PY +KA K +YE + AY+ + N A GV E
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPNAAKKGVVE 177
>gi|403222987|dbj|BAM41118.1| high-mobility-group protein [Theileria orientalis strain Shintoku]
Length = 93
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPKR LS+Y F ++ R + PD K VA +GK G W S+ ++EKAPY +
Sbjct: 16 KKDPNAPKRALSSYMFFAKEKRNELIKENPDLAKDVATVGKLVGAAWNSLDDSEKAPYEK 75
Query: 95 KALNKKAEYE 104
A + YE
Sbjct: 76 LAEADRERYE 85
>gi|68063985|ref|XP_673987.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|56492229|emb|CAH99818.1| high mobility group protein, putative [Plasmodium berghei]
Length = 96
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD +APKR LSAY F ++ R P +K VA +GK G+ W + E EKAPY +
Sbjct: 15 KKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDEREKAPYEK 74
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 75 KAQEDKIRYE 84
>gi|343427561|emb|CBQ71088.1| probable NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 99
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
KKD APKRPLSAY F +D R+ K + P+ + +G+ G KW MS+AEK PY
Sbjct: 22 KKDPAAPKRPLSAYMFFSQDHRERVKTANPE-AGFSDVGRLLGAKWNEMSDAEKKPY 77
>gi|336366372|gb|EGN94719.1| hypothetical protein SERLA73DRAFT_187779 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379042|gb|EGO20198.1| hypothetical protein SERLADRAFT_477580 [Serpula lacrymans var.
lacrymans S7.9]
Length = 119
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A KAE K + KA K PKR LSAY F +D+R+ K PD +GK G K
Sbjct: 13 AEKAE-KTSRAKATKAAKGTGPKRALSAYMFFSQDWRERIKAENPDA-GFGEVGKLLGAK 70
Query: 81 WKSMSEAEKAPYVQKALNKKAEYE 104
WK + E+EK PYV+ A KA E
Sbjct: 71 WKELDESEKKPYVELAAKDKARAE 94
>gi|405977513|gb|EKC41956.1| High mobility group protein B3 [Crassostrea gigas]
Length = 202
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D+ PKRP SAYF F+ DFR K D+K + M G+ W+++ + EK P+ + A
Sbjct: 95 DAGKPKRPQSAYFCFLADFRLKMKGKDIDHKEIIKM---AGEAWRNLDDNEKKPFEKLAQ 151
Query: 98 NKKAEYELALEAYKKQLNDNGAGVS 122
++ +YE AL ++K G G S
Sbjct: 152 KEQEKYEQALSDWRK----GGGGAS 172
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 27 KPKKEKAGKKK--DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
+PK E + K+K D N PKR SAYF F+ R+ K++ +A K KW M
Sbjct: 3 RPKAEGSRKRKAKDPNRPKRATSAYFFFLSKMREDSKKAGKPITKIAEFTKECSAKWAKM 62
Query: 85 SEAEKAPYVQKALNKKAEYELALEAYK-KQLNDNG 118
+E +K P+ +KAL K Y+ + YK K ND G
Sbjct: 63 NEKDKEPFAKKALTDKNRYDAEMAIYKGKDPNDAG 97
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
K+KD NAPKRPLS Y IF + R KE PD S+ + K G +WKS+++ EK Y
Sbjct: 573 KEKDPNAPKRPLSTYMIFSAEMRAKVKEENPDF-SITDVAKELGVRWKSVTDEEKVKY 629
>gi|402583047|gb|EJW76991.1| hypothetical protein WUBG_12099 [Wuchereria bancrofti]
Length = 170
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKR LSA+F F D R ++ P+ K V + + G+ WK++ E E+A Y +K
Sbjct: 91 KKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWK-VGQVAQELGRFWKALGEEERAVYERK 149
Query: 96 ALNKKAEYELAL 107
AL K Y L
Sbjct: 150 ALEDKERYAEVL 161
>gi|452982812|gb|EME82570.1| hypothetical protein MYCFIDRAFT_79010 [Pseudocercospora fijiensis
CIRAD86]
Length = 389
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 24 AENKPKK--EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFK---ESFPDNKSVAA--MGKA 76
A PKK ++ K++D NAPKRPL+AYF ++++ R ++ P + + A + K
Sbjct: 130 ANGDPKKRQKRPYKQRDPNAPKRPLTAYFRYLKEVRPLIAAEVQNNPPSDGIKAGDISKI 189
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
++WK++ +A++ PY Q ++ A YE A++ YK
Sbjct: 190 ATERWKALGDAKRKPYHQAYQSELAAYEAAVKEYK 224
>gi|109001746|ref|XP_001107984.1| PREDICTED: high mobility group protein B4-like [Macaca mulatta]
gi|67968844|dbj|BAE00779.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P + SV + KA G+ W + ++ EK PY Q+A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENP-SWSVVQVAKATGKMWSATTDLEKHPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y LE Y+KQ
Sbjct: 150 LLRAKYFEELELYRKQ 165
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 11 PKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 71 ARYQEEMMNY 80
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|222619008|gb|EEE55140.1| hypothetical protein OsJ_02931 [Oryza sativa Japonica Group]
Length = 157
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 54 EDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
EDFRK++KE P KS+ +GKA G+KW +M+ E+ Y A K+AEYE A+ + K+
Sbjct: 85 EDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKK 144
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
SV + K GQ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SVGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|308498523|ref|XP_003111448.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
gi|308240996|gb|EFO84948.1| hypothetical protein CRE_03995 [Caenorhabditis remanei]
Length = 702
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D PKR +AYF++ + R SFKE D +VA + K GG KWK M +K + +KA
Sbjct: 555 DPLEPKRATTAYFLWFQANRLSFKE---DGDTVADVAKKGGAKWKEMGSDDKKEWEEKAA 611
Query: 98 NKKAEYELALEAYKK 112
KA YE ++ YKK
Sbjct: 612 KDKARYEAEMKEYKK 626
>gi|384499401|gb|EIE89892.1| hypothetical protein RO3G_14603 [Rhizopus delemar RA 99-880]
Length = 352
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M+K ++ K + K K PK PLSAY ++ + R +SFP + +V + K
Sbjct: 177 MIKEEPSDKKTARRVKKKIKSPGIPKHPLSAYMWYLTEVRPKTMKSFPSS-NVGQISKYC 235
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAG 120
+KW +M++ E+AP+ KA K Y ++ Y Q ND+ G
Sbjct: 236 AEKWHTMTDEERAPWKTKAQVDKERYAREMQLYAIQ-NDHELG 277
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 33 AGKKKDSNAP---KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEK 89
A K+D+NAP RP +AY +F + R+ K+ P +V + K ++W+ MS+ EK
Sbjct: 82 ATNKEDANAPIRVTRPPNAYLLFNKKMRRVLKDQDP-TMNVGEISKQIAERWRKMSKEEK 140
Query: 90 APYVQKALNKKAE 102
YV +A K E
Sbjct: 141 EMYVNEANRLKQE 153
>gi|85110964|ref|XP_963712.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
gi|28925429|gb|EAA34476.1| hypothetical protein NCU02819 [Neurospora crassa OR74A]
Length = 597
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R+ K N S + K G+ W++++ AE
Sbjct: 111 RKYRRHPKADENAPERPPSAYVLFSNKMREDLKGR---NLSFTEIAKLVGENWQNLTPAE 167
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY KA K +Y L YKK
Sbjct: 168 KEPYESKAQAYKEKYHAELAEYKK 191
>gi|229594979|ref|XP_001020474.3| HMG box family protein [Tetrahymena thermophila]
gi|225566454|gb|EAS00229.3| HMG box family protein [Tetrahymena thermophila SB210]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPK+P+SAY IF + + K PD S + + K GQ+W+ +S+ +K Y++K
Sbjct: 58 NAPKKPMSAYLIFCQTRQPEIKAKNPD-LSFSEISKVVGQEWRDLSQDKKQGYIKKEEQL 116
Query: 100 KAEYELALEAYKKQLNDNGAGVSEDSWKSTSE 131
K EY L + K+ +NG+ S + STS+
Sbjct: 117 KKEYNSKLAEFNKK--NNGSTQSSSTAPSTSQ 146
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K GQ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 129 DPNAPKRPPSAFFLFCSEHRPKIKNDHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAA 187
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 188 KLKEKYEKDIAAYR 201
>gi|321478856|gb|EFX89813.1| hypothetical protein DAPPUDRAFT_232871 [Daphnia pulex]
Length = 190
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD NAPKR LSA+F F D R + K + P+ +V + K G++W + E+ K+ Y A
Sbjct: 97 KDPNAPKRSLSAFFWFCNDERGNVKAAHPEY-TVGDIAKDLGKQWGEVDESTKSKYEAMA 155
Query: 97 LNKKAEYELALEAYKKQL 114
KA YE AYKK+L
Sbjct: 156 EKDKARYERENNAYKKKL 173
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQ 94
K D+N P+ ++AY F++ R+ K+ PD V + K ++WK+MS+ EK + +
Sbjct: 5 KADANKPRGRMTAYAFFVQTCREEHKKKHPDENVVFSEFSKKCAERWKTMSDKEKKRFQE 64
Query: 95 KALNKKAEYELALEAYKKQLNDNGAG 120
A K ++ + Y + D GAG
Sbjct: 65 MAERDKVRFDDEMRHY--EPADKGAG 88
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 150 KLKEKYEKDIAAYR 163
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ + K+ PD+ + A + ++WK+MS EK + +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 95 KALNKKAEYELALEAY 110
A KA Y+ ++ Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|407850184|gb|EKG04681.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPKR +SAYF F+ DFRK PD SV KA G WK +S+ K PY
Sbjct: 198 KAKDENAPKRSMSAYFFFVGDFRK----KHPDL-SVTETSKAAGAAWKELSDEMKKPYEA 252
Query: 95 KALNKKAEYELALEA 109
A K Y+ + A
Sbjct: 253 MAQKDKERYQREMAA 267
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KK + PK LS Y +F D R KE P K+ + ++ G+ W S+A K Y +
Sbjct: 109 KKPDDYPKAALSPYILFGNDHRDKVKEQNPGVKNTEIL-QSLGKMWAEASDAVKEKYKKL 167
Query: 96 ALNKKAEYELALEAYKK 112
A + K ++ L YKK
Sbjct: 168 AEDDKKRFDRELSEYKK 184
>gi|70946314|ref|XP_742884.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56522109|emb|CAH79930.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 102
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD +APKR LSAY F ++ R P +K VA +GK G+ W + E EKAPY +
Sbjct: 21 KKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDEREKAPYEK 80
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 81 KAQEDKLRYE 90
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +APKRP S +F+F + R K + P SV + K G+ W +++++EK PY+ KA
Sbjct: 89 DPSAPKRPPSGFFLFSSEIRPKIKSTNP-GISVGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 98 NKKAEYELALEAYKKQLNDNGA 119
K +YE + YK + +GA
Sbjct: 148 KLKEKYEKDVADYKSKGKFDGA 169
>gi|407404609|gb|EKF29994.1| high mobility group protein, putative [Trypanosoma cruzi
marinkellei]
Length = 361
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPKR +SAYF F DFRK PD SV KA G WK +S+ K PY
Sbjct: 289 KVKDENAPKRSMSAYFFFASDFRK----KHPDL-SVTETSKAAGAAWKELSDEMKKPYEA 343
Query: 95 KALNKKAEYELALEA 109
A K Y+ + A
Sbjct: 344 MAQKDKERYQREMAA 358
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KK + PK LS Y +F D R KE P+ K+ + + G+ W S+A K Y +
Sbjct: 200 KKPDDYPKAALSPYILFGNDHRDKVKEQNPEMKNTEILQRL-GKMWAEASDAVKEKYKKL 258
Query: 96 ALNKKAEYELALEAYKK 112
A + K ++ L YKK
Sbjct: 259 AEDDKKRFDRELNEYKK 275
>gi|410961840|ref|XP_003987486.1| PREDICTED: LOW QUALITY PROTEIN: TOX high mobility group box family
member 4 [Felis catus]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
+++A K + PKK KKD N P++P+SAY +F D + + K P N + + K
Sbjct: 206 VVEAGKKQKAPKKRX---KKDPNEPQKPVSAYALFFRDTQAAIKGQNP-NATFGEVSKIV 261
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
W S+ E +K Y +K K EY AL AYK
Sbjct: 262 ASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYK 295
>gi|68061725|ref|XP_672863.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|68076125|ref|XP_679982.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490279|emb|CAI01706.1| high mobility group protein, putative [Plasmodium berghei]
gi|56500842|emb|CAH99000.1| hypothetical protein PB001601.02.0 [Plasmodium berghei]
Length = 98
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D APKR LSAY +++D R + P+ K VA +GK G+ W ++ A+KAPY +KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 97 LNKKAEYELALEAYKK 112
K Y +E Y+K
Sbjct: 80 ELDKVRYSKEIEEYRK 95
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 150 KLKEKYEKDIAAYR 163
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A + ++WK+MS EK + +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 95 KALNKKAEYELALEAY 110
A KA Y+ ++ Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|444708344|gb|ELW49421.1| High mobility group protein B1 [Tupaia chinensis]
Length = 302
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F D+R KE S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSDYRPKIKEH--PGLSIGDVAKKLGEMWNNTATD 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 139 DKQPYEKKAAKLKEKYEKDIAAYQ 162
>gi|402853838|ref|XP_003891595.1| PREDICTED: high mobility group protein B4 [Papio anubis]
Length = 191
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P + SV + KA G+ W + ++ EK PY Q+A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENP-SWSVVQVAKATGKMWSATTDLEKHPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y LE Y+KQ
Sbjct: 150 LLRAKYFEELERYRKQ 165
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 11 PKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 71 ARYQEEMMNY 80
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K GQ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP S +F+F D R K P ++ + K G+ W ++ EK PY
Sbjct: 86 KKKDPNAPKRPPSGFFLFCSDHRPKIKAGSP-GLTIGDVAKKLGELWNGCTDEEKKPYNA 144
Query: 95 KALNKKAEYELALEAYK 111
KA K +YE + Y+
Sbjct: 145 KAAKLKEKYEKDVADYR 161
>gi|345320167|ref|XP_001521836.2| PREDICTED: FACT complex subunit SSRP1-like, partial
[Ornithorhynchus anatinus]
Length = 295
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 33 AGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
GKK KD NAPKRP+SAY +++ R+ K P S+ + K G+ WK M++ +K
Sbjct: 117 VGKKGKDPNAPKRPMSAYMLWLNASREKIKADHP-GISITDLSKKAGEIWKGMTKEKKEE 175
Query: 92 YVQKALNKKAEYELALEAY 110
+ +KA K EYE A++ Y
Sbjct: 176 WDRKAEEAKREYEKAMKEY 194
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD NAPKRP S +F+F D R K P ++ + K G+ W ++ EK PY
Sbjct: 93 KKKDPNAPKRPPSGFFLFCSDHRPKIKAGSP-GLTIGDVAKKLGELWNGCTDEEKKPYNA 151
Query: 95 KALNKKAEYELALEAYKKQ 113
KA K +YE + Y+ +
Sbjct: 152 KAAKLKEKYEKDVADYRTE 170
>gi|444510285|gb|ELV09567.1| High mobility group protein B3 [Tupaia chinensis]
Length = 197
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D NAPKRP S +F+F +FR K + P S+ + K G+ W ++S++EK PY+ KA
Sbjct: 77 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDSEKQPYITKA 134
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKSKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
S+ K G+ W + + EK PY +KA K +YE + AY
Sbjct: 121 SIGDAAKKLGEMWNNTAADEKQPYEKKAAKLKEKYEKDIAAY 162
>gi|341900759|gb|EGT56694.1| hypothetical protein CAEBREN_25379 [Caenorhabditis brenneri]
Length = 699
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKR SAY +++ R S KE + SVA + K GGQKWK+MS +K + K +
Sbjct: 554 NAPKRATSAYLLWLNANRASLKE---EGDSVADVAKKGGQKWKTMSADDKKEWEAKYEKE 610
Query: 100 KAEYELALEAYKK 112
K YE ++ YKK
Sbjct: 611 KVRYEAEMKEYKK 623
>gi|328773430|gb|EGF83467.1| hypothetical protein BATDEDRAFT_85013 [Batrachochytrium
dendrobatidis JAM81]
Length = 505
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP+ AY +F++ + E P+ K M G W+ +++ +K PY+ A
Sbjct: 89 DPNAPKRPIPAYVLFVKSQYQKIAEDNPELKPKDVMVILGAH-WRDLTDTQKQPYLDMAA 147
Query: 98 NKKAEYELALEAYKKQL 114
+ +Y +EAYK +L
Sbjct: 148 TYREQYTFDMEAYKDKL 164
>gi|124512426|ref|XP_001349346.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|23499115|emb|CAD51195.1| high mobility group protein [Plasmodium falciparum 3D7]
Length = 99
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D APKR LSAY +++D R + P+ K VA +GK G+ W +S A+KAPY +KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIKEKPELAKDVAQVGKLIGEAWGQLSPAQKAPYEKKA 79
Query: 97 LNKKAEYELALEAYKKQ 113
K Y +E Y+K+
Sbjct: 80 QLDKVRYSKEIEEYRKK 96
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 13 KPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAA 72
+P AD K+RK +KKD NAPK+ LSA+F+F D R K PD K V+
Sbjct: 618 EPPADEGKSRK-----------RKKDPNAPKKALSAFFLFCNDERPKVKADHPDWK-VSE 665
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKK 112
+ K G++W++ K+ Y +A +K YE AL ++
Sbjct: 666 IAKELGKRWETCK--NKSKYESQAQVEKQRYEKALPGPRR 703
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD + PK L+ Y +F++ K+ P K ++WK+++ EK +
Sbjct: 543 KDKSKPKGALTPYALFLQSMHADQKKKHPSVTLDFKTFSKECSEQWKNLTAKEKKKFEDL 602
Query: 96 ALNKKAEYELALEAYK 111
A K Y +++Y+
Sbjct: 603 AAKDKERYRKEMQSYE 618
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 32 KAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
K+GKK KD NAPKRP SAY F R ++++P + ++ A+ G+ W+ +++ K
Sbjct: 91 KSGKKSKDPNAPKRPPSAYICFANAVRPELRKTYPSD-TMPAISTKIGELWRQLTDDNKE 149
Query: 91 PYVQKALNKKAEYELALEAYKKQLNDNGAGVS 122
PY ++A K +++ + AYK G GV+
Sbjct: 150 PYNKQAEALKLKFQTEMAAYK-----GGKGVA 176
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD N PK+P +A+ F R+ K P K + + G+ W + EA+K Y A
Sbjct: 10 KDPNKPKKPTTAFMYFSNAMRERVKTQNPGLK-MTDIASVLGKLWGQLPEADKDKYQTMA 68
Query: 97 LNKKAEYELALEAYKKQLNDNG 118
+ K Y A++ Y ++ G
Sbjct: 69 NSDKERYAKAMDGYVAPVSTGG 90
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP+RP S++ +F +D K P + SV + KA G+ W + ++ EK PY Q+A
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENP-SWSVVQVAKATGKMWSATADLEKHPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y LE Y+KQ
Sbjct: 150 LLRAKYFEELELYRKQ 165
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 11 PKANVSSYIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 70
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 71 ARYQEEMMNY 80
>gi|269863189|ref|XP_002651129.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|220065078|gb|EED42926.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
Length = 141
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPK+P S+Y +F + RK+ ++ V K G++W +++EAEK+ Y +
Sbjct: 7 KPKDKNAPKKPCSSYMLFGHELRKN--DATIKALKVTEQAKQIGERWNALTEAEKSEYEK 64
Query: 95 KALNKKAEYELALEAYK 111
KA+ K +Y LE YK
Sbjct: 65 KAMEAKEKYNKELEIYK 81
>gi|336274626|ref|XP_003352067.1| hypothetical protein SMAC_00615 [Sordaria macrospora k-hell]
gi|380096352|emb|CCC06400.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 595
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R+ K N S + K G+ W++++ AE
Sbjct: 107 RKYRRHPKADENAPERPPSAYVLFSNKMREDLKGR---NLSFTEIAKLVGENWQNLTPAE 163
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY KA K +Y L YKK
Sbjct: 164 KEPYESKAQAYKEKYHAELAEYKK 187
>gi|16033552|gb|AAL13284.1|AF416953_1 high mobility group protein [Naegleria fowleri]
Length = 209
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
APKRPLS+Y +F +D RK E P K V + K G W+ MS+ EK PY KA K
Sbjct: 117 APKRPLSSYMLFSQDKRKELLEKDPTLK-VTEVAKQVGALWQKMSDEEKKPYNDKAAKLK 175
Query: 101 AEYE 104
EYE
Sbjct: 176 KEYE 179
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
DSNAPK+P +AYF+F ++ R+ K+ + KS + + K G+ W ++E +K PY +
Sbjct: 13 DSNAPKKPKTAYFLFCDEHREEAKKKAGEGKSASEVSKILGEMWGKLTEEQKKPYNDR-- 70
Query: 98 NKKAEYELALEAYKKQLND 116
Y++ +E +KK +++
Sbjct: 71 -----YKIEMEKHKKVMDE 84
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F +FR K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQLNDNGA 119
+K PY +KA K +YE + AY+ + +G
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYRAKGKVDGG 171
>gi|414869181|tpg|DAA47738.1| TPA: hypothetical protein ZEAMMB73_864709 [Zea mays]
Length = 198
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 33 AGKKKD---SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
AGK+K S PKRP SA+F+FM +FR+ ++ P NKS+ + K G+KW + S+
Sbjct: 142 AGKRKKVIMSGKPKRPPSAFFVFMSEFRQEYQVQHPGNKSIVVVSKTAGEKWHAKSD 198
>gi|392587353|gb|EIW76687.1| high mobility group box, partial [Coniophora puteana RWD-64-598
SS2]
Length = 67
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRPLSAY F +D+R+ K PD +GK G KWK + E EK PYV+ A K
Sbjct: 1 PKRPLSAYMFFSQDWRERIKTENPDA-GFGEVGKLLGAKWKELDEEEKKPYVEMAAKDKV 59
Query: 102 EYE 104
E
Sbjct: 60 RAE 62
>gi|223649078|gb|ACN11297.1| FACT complex subunit SSRP1 [Salmo salar]
Length = 711
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P++EK K+KD+NAPKRP+S+Y +++ R+ K P S+ + K G+ WK + +
Sbjct: 531 PRREK--KQKDTNAPKRPMSSYMLWLNSSRERIKSENP-GISITEISKKAGEMWKQIGKE 587
Query: 88 EKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVS 122
+K + KA K YE A++ Y+ ++G G S
Sbjct: 588 DKEEWDGKAEEAKKNYEKAMKEYR----ESGGGSS 618
>gi|729729|sp|P40622.1|HMG1A_CHITE RecName: Full=Mobility group protein 1A
gi|156587|gb|AAA21712.1| high mobility group protein 1a [Chironomus tentans]
Length = 114
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRPLSAY +++ R+S K+ PD K V + K GG+ W+ M +K+ + KA K
Sbjct: 5 PKRPLSAYMLWLNSARESIKKENPDFK-VTEIAKKGGELWRGMK--DKSEWEAKAAKMKE 61
Query: 102 EYELALEAYKKQLNDNGAGVS 122
EYE A++ +++ D +G S
Sbjct: 62 EYEKAMKEFERNGGDKSSGAS 82
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F +FR K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F +FR K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F +FR K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|195627962|gb|ACG35811.1| HMG1/2-like protein [Zea mays]
Length = 123
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY-V 93
K+K KR L+ +F F+ +FR + E P+ K V + KA G+KW+SMS+ EKA Y
Sbjct: 12 KRKKVGGAKRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKYGS 71
Query: 94 QKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDE 145
K + KA + + K + + +E S KS SEV+ + +E DE
Sbjct: 72 SKKQDGKASKKENTSSKKAKADIREGDEAEGSNKSKSEVEDDEQDGNEDEDE 123
>gi|50294784|ref|XP_449803.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529117|emb|CAG62781.1| unnamed protein product [Candida glabrata]
Length = 196
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 27 KPKKEKAG-KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
KPK K K++D N PKRP +AY +F E ++ KE + K + WK++S
Sbjct: 83 KPKTRKQKLKERDPNMPKRPTNAYLLFCEMNKEKIKEG-----GSVDVTKDLTESWKNLS 137
Query: 86 EAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEI 142
E E+ PY + + Y+ +EAY K+ AG + K++S+ + +S+E+
Sbjct: 138 EQERKPYYRLYNEDRERYQAEMEAYNKKSKTEDAGKEDSMSKNSSKQEDSDQTSNEV 194
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K EYE + AY+
Sbjct: 152 KEEYEKDIAAYR 163
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 40 DPNAPKRPPSAFFLFCSEHRPKIKNEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAA 98
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 99 KLKEKYEKDIAAYR 112
>gi|384500553|gb|EIE91044.1| hypothetical protein RO3G_15755 [Rhizopus delemar RA 99-880]
Length = 323
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
K D+NAP +P SAY +F D R K+ NKS + K G +WKS+ EK Y +
Sbjct: 178 KPDANAPFKPPSAYVMFSNDTRAELKQ---QNKSFTDLAKIIGDRWKSIPTEEKNAYERN 234
Query: 96 ALNKKAEYELALEAYKK 112
AL + EY +E Y+K
Sbjct: 235 ALKAREEYLKRVEEYQK 251
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 115 DPNAPKRPPSAFFLFCSEHRPEIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAA 173
Query: 98 NKKAEYELALEAY 110
K +YE + AY
Sbjct: 174 KLKEKYEKDIAAY 186
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 27 KGDPNKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEN 86
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|162460188|ref|NP_001105108.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|4995921|emb|CAB44297.1| HMG1 protein [Zea mays]
Length = 123
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY-V 93
K+K KR L+ +F F+ +FR + E P+ K V + KA G+KW+SMS+ EKA Y
Sbjct: 12 KRKKVGGAKRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKYGS 71
Query: 94 QKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDE 145
K + KA + + K + + +E S KS SEV+ + +E DE
Sbjct: 72 SKKQDGKASKKENTSSKKAKADVREGDEAEGSNKSKSEVEDDEQDGNEDEDE 123
>gi|402226001|gb|EJU06061.1| HMG-box, partial [Dacryopinax sp. DJM-731 SS1]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESF---PDNKSVAAMGKAGGQKWKSMS 85
KK + K+KD NAPKRP SAY ++ D R F E F P ++ +A + + W +S
Sbjct: 1 KKRRMKKEKDPNAPKRPASAYLLYQNDKRAEFTEKFKGSPYHEMLAKI----SESWGKLS 56
Query: 86 EAEKAPYVQKALNKKAEYELALEAYKKQLND 116
E EK+PY+ K +YE +AY+ D
Sbjct: 57 EVEKSPYLSAQAKLKEDYEGRKKAYESSKTD 87
>gi|397631195|gb|EJK70063.1| hypothetical protein THAOC_08612 [Thalassiosira oceanica]
Length = 827
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 20 KARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQ 79
K RKAE P K+K KK+D NAPK P SAY F R KE+ PD + K G+
Sbjct: 580 KKRKAE--PSKQKK-KKRDPNAPKAPKSAYVFFTSAKRSEIKEANPD-AGFGDISKLLGK 635
Query: 80 KWKSMSEAEKAPYVQKALNKKAEYELALE 108
+K +S+AEK PY + A KA Y+ +E
Sbjct: 636 AYKELSDAEKEPYDEMARKDKARYKREME 664
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNK--------SVAAMGKAGGQKWKSMSEAEK 89
D NAPK+P++A+ ++ R+ KE PD K K G K+++++E EK
Sbjct: 695 DPNAPKKPMNAFMLYSNSIRQKIKEENPDMKVGDITYADPFFLQSKECGIKYRALNEEEK 754
Query: 90 APYVQKALNKKAEYELALEAYKK 112
+ KA K +Y++ Y+K
Sbjct: 755 KKWTAKADAAKEKYKVEFAQYEK 777
>gi|365991581|ref|XP_003672619.1| hypothetical protein NDAI_0K01850 [Naumovozyma dairenensis CBS 421]
gi|343771395|emb|CCD27376.1| hypothetical protein NDAI_0K01850 [Naumovozyma dairenensis CBS 421]
Length = 631
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PKRP SAYF+F R + + FPD K V + K +WK +++ EK PY +
Sbjct: 383 GPKRPSSAYFLFSMSIRNTLLQQFPDAK-VPELSKLASARWKELTDVEKKPYYDEFRTNW 441
Query: 101 AEYELALEAYKKQL 114
+Y + + Y+K L
Sbjct: 442 DKYRILRDEYEKTL 455
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRP + F ++ R + PD K++ + K G+KW+ + +KA Y + +
Sbjct: 457 PKRPSGPFIQFTQEIRPQIVKENPD-KNLIEITKIIGEKWRELDPTKKAEYTETYKKRLK 515
Query: 102 EYE 104
E+E
Sbjct: 516 EWE 518
>gi|12838247|dbj|BAB24141.1| unnamed protein product [Mus musculus]
Length = 181
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP++P S++ +F D K+ PD +V + KA G+ W + EAEK PY QKA
Sbjct: 89 DPKAPRKPPSSFLLFSRDHYAMLKQENPD-WTVVQVAKAAGKMWSTTDEAEKKPYEQKAA 147
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y EAY+ Q
Sbjct: 148 LMRAKYFEEQEAYRNQ 163
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD PK +S+Y FM +FR FKE P+ + +KW+S+S+ EKA Y
Sbjct: 4 KDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEAL 63
Query: 96 ALNKKAEYELALEAY 110
A + KA Y+ + Y
Sbjct: 64 AEHDKARYQQEMMNY 78
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK + KKKD +APKR LSAY F + R + P S +GK G+KWK+MS +
Sbjct: 6 KKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENP-GISFGQVGKLLGEKWKAMSSED 64
Query: 89 KAPYVQKALNKKAEYE 104
K PY KA K YE
Sbjct: 65 KTPYETKAEADKKRYE 80
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK+E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKEETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
SV + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SVGDVAKKLGEMWNNAAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|164658105|ref|XP_001730178.1| hypothetical protein MGL_2560 [Malassezia globosa CBS 7966]
gi|159104073|gb|EDP42964.1| hypothetical protein MGL_2560 [Malassezia globosa CBS 7966]
Length = 367
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 15 HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMG 74
H +M+ R A + + + G +D NAPK+PLSAYF+++ R P+ + G
Sbjct: 262 HENMI--RTARRRMGQSRRGNLRDPNAPKKPLSAYFLYLRSIRAD-----PEQREDVLRG 314
Query: 75 K--------AGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGA 119
+ KW+S++ EK P+V++A K YE +AY++ +G+
Sbjct: 315 EHDTTKQSVLAAAKWRSLNADEKRPFVEQAECDKRAYEQRRQAYEQSRTLSGS 367
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSE 86
P K K PK+PL+A+ ++ D + K + P+ + +VA + K GQ++ S+ +
Sbjct: 168 PSMAKQSLKSRLRPPKQPLTAWQLYFTDELRKLKAASPNERLNVAQLAKDAGQRYASLPD 227
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEA 146
++ Y + + +YE AL ++ QL + ++ T+ + G+S + D
Sbjct: 228 DKRQQYFVRGQEARGQYEAALATWRAQLTPE--EIRHENMIRTARRRMGQSRRGNLRDPN 285
Query: 147 EQEFSSQVSSYFM 159
+ +S+YF+
Sbjct: 286 APK--KPLSAYFL 296
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK--SVAAMGKAGGQ 79
R+ + P K K KKKD NAPKRP SAYF+++ + R FK +NK SV + K G+
Sbjct: 535 RRQKETPGKVKR-KKKDPNAPKRPQSAYFLWLNENRGRFK---AENKGISVTELTKLAGK 590
Query: 80 KWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQ 113
+WK + EK + + K +++ A++ YK Q
Sbjct: 591 EWKKIDPDEKQKFERMYQKSKVKFDAAMKEYKSQ 624
>gi|355565174|gb|EHH21663.1| hypothetical protein EGK_04785, partial [Macaca mulatta]
Length = 201
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+++ +K DM KA KA + PK+E K KD NAPKRP SA+F+F ++
Sbjct: 50 KIMTAKEKGKFEDMPKADKAHYEREMKTYIPPKRETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYEL 105
R K P S+ +GK G+ W + +K PY + ++ K + L
Sbjct: 110 RPKIKGEHP-GLSIGDVGKKPGEMWNDTAADDKHPYEKDIVHIKLKESL 157
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +APKR LS +F+F R K+ P N V + KA G++WK++S A+KA Y ++A
Sbjct: 95 DPDAPKRNLSPFFLFCNVKRAEVKKVHP-NWGVGDVAKALGEQWKNVSAADKAKYEKEAA 153
Query: 98 NKKAEYELALEAY 110
+K YE +EAY
Sbjct: 154 KEKIRYEKDMEAY 166
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 34 GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPY 92
GKK + + PK +SAY F++ R+ K+ P V A K ++WK M++ EK +
Sbjct: 2 GKKGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVF 61
Query: 93 VQKALNKKAEYELALEAY 110
A K Y +E Y
Sbjct: 62 HDMADKDKERYNTEMEKY 79
>gi|183212221|gb|ACC54773.1| high-mobility group box 1 beta [Xenopus borealis]
Length = 95
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F DFR K +P + ++ + K G+ W + +
Sbjct: 29 PKGETKKKFKDPNAPKRPPSAFFLFCSDFRPKIKGEYPGS-TIGDIAKKLGEMWNNTATD 87
Query: 88 EKAPYVQK 95
+K PY +K
Sbjct: 88 DKLPYERK 95
>gi|124805429|ref|XP_001350438.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|6525222|gb|AAF15357.1|AF201952_1 high mobility group protein [Plasmodium falciparum]
gi|23496560|gb|AAN36118.1|AE014844_29 high mobility group protein [Plasmodium falciparum 3D7]
Length = 97
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD +APKR LSAY F ++ R P+ +K VA +GK G+ W + E EKAP+ +
Sbjct: 15 KKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEK 74
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 75 KAQEDKLRYE 84
>gi|294886161|ref|XP_002771587.1| Nonhistone chromosomal protein, putative [Perkinsus marinus ATCC
50983]
gi|294896150|ref|XP_002775413.1| Nonhistone chromosomal protein, putative [Perkinsus marinus ATCC
50983]
gi|239875293|gb|EER03403.1| Nonhistone chromosomal protein, putative [Perkinsus marinus ATCC
50983]
gi|239881636|gb|EER07229.1| Nonhistone chromosomal protein, putative [Perkinsus marinus ATCC
50983]
Length = 104
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 14 PHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP-DNKSVAA 72
P D+ K RK K K+ AGK K KR L+ YF+F ++ R+ K F +N+ +
Sbjct: 3 PKKDVSKVRKERKKTSKKDAGKPK----VKRALTPYFMFAQENREKVKLEFGFENRQLGD 58
Query: 73 MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYE 104
+ K G+KWK++S+ EKA YV+ + + K YE
Sbjct: 59 IAKKLGEKWKNLSDEEKAHYVKLSEDDKKRYE 90
>gi|414585862|tpg|DAA36433.1| TPA: HMG1 protein [Zea mays]
Length = 123
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY-V 93
K+K KR L+ +F F+ +FR + E P+ K V + KA G+KW+SMS+ EKA Y
Sbjct: 12 KRKKVGGAKRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKYGG 71
Query: 94 QKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDE 145
K + KA + + K + + +E S KS SEV+ + +E DE
Sbjct: 72 SKKQDGKASKKENTSSKKAKADVREGDEAEGSNKSKSEVEDDEQDGNEDEDE 123
>gi|148277100|ref|NP_081312.2| high mobility group protein B4 [Mus musculus]
gi|81892334|sp|Q6P8W9.1|HMGB4_MOUSE RecName: Full=High mobility group protein B4
gi|38174595|gb|AAH61030.1| High-mobility group box 4 [Mus musculus]
gi|148698295|gb|EDL30242.1| high-mobility group box 4 [Mus musculus]
Length = 181
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D AP++P S++ +F D K+ PD +V + KA G+ W + EAEK PY QKA
Sbjct: 89 DPKAPRKPPSSFLLFSRDHYAMLKQENPD-WTVVQVAKAAGKMWSTTDEAEKKPYEQKAA 147
Query: 98 NKKAEYELALEAYKKQ 113
+A+Y EAY+ Q
Sbjct: 148 LMRAKYFEEQEAYRNQ 163
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD PK +S+Y FM +FR FKE P+ + +KW+S+S+ EKA Y
Sbjct: 4 KDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEAL 63
Query: 96 ALNKKAEYELALEAY 110
A KA Y+ + Y
Sbjct: 64 AELDKARYQQEMMNY 78
>gi|388854657|emb|CCF51814.1| probable NHP6B-nonhistone chromosomal protein [Ustilago hordei]
Length = 99
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
KKD APKRPLSAY F +D R+ K P+ +G+ G +WK MS+AEK PY
Sbjct: 22 KKDPAAPKRPLSAYMFFSQDQRERVKADNPE-AGFGDVGRLLGARWKEMSDAEKKPY 77
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +APKR LS +F+F R K+ P N V + KA G++WK++S A+KA Y ++A
Sbjct: 121 DPDAPKRNLSPFFLFCNVKRAEVKKVHP-NWGVGDVAKALGEQWKNVSAADKAKYEKEAA 179
Query: 98 NKKAEYELALEAY 110
+K YE +EAY
Sbjct: 180 KEKIRYEKDMEAY 192
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 34 GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPY 92
GKK + + PK +SAY F++ R+ K+ P V A K ++WK M++ EK +
Sbjct: 28 GKKGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVF 87
Query: 93 VQKALNKKAEYELALEAY 110
A K Y +E Y
Sbjct: 88 HDMADKDKERYNTEMEKY 105
>gi|54020668|ref|NP_112383.1| FACT complex subunit SSRP1 [Rattus norvegicus]
gi|83305804|sp|Q04931.2|SSRP1_RAT RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53734496|gb|AAH83588.1| Structure specific recognition protein 1 [Rattus norvegicus]
gi|149022436|gb|EDL79330.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
gi|149022437|gb|EDL79331.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 709
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP+SAY +++ R+ K P S+ + K G+ WK MS+ +K + +KA
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKAGEIWKGMSKEKKEEWDRKAE 601
Query: 98 NKKAEYELALEAYK 111
+ + EYE A++ Y+
Sbjct: 602 DARREYEKAMKEYE 615
>gi|156097921|ref|XP_001614993.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148803867|gb|EDL45266.1| high mobility group protein, putative [Plasmodium vivax]
Length = 171
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D APKR LSAY +++D R + P+ K VA +GK G+ W +S A+K PY +KA
Sbjct: 92 DPLAPKRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGQLSAAQKTPYEKKA 151
Query: 97 LNKKAEYELALEAYKK 112
K Y +E Y+K
Sbjct: 152 QLDKVRYSKEIEEYRK 167
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K K+KD NAPKR +AY IF + R K P+ + K KWK++S+ EKAP
Sbjct: 43 KGKKEKDPNAPKRAKTAYIIFATEERPRAKADNPE-LGFGDLTKCVSDKWKALSDDEKAP 101
Query: 92 YVQKALNKKAEYELALEAYKKQLNDN 117
Y++KA K Y + Y K +D+
Sbjct: 102 YLEKAAQDKERYADEVSKYNKSKSDD 127
>gi|291228964|ref|XP_002734447.1| PREDICTED: structure specific recognition protein-like
[Saccoglossus kowalevskii]
Length = 259
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 46 LSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYEL 105
++AYF+++ + R+S K+S P + SVA + K G+ WK M+E++K Y A +K +YE
Sbjct: 79 MTAYFLWLNEKRESIKKSLPGS-SVAEISKRAGELWKKMTESDKKKYTALAAEEKIKYED 137
Query: 106 ALEAYKKQLND 116
A++ YK++ D
Sbjct: 138 AMKVYKRKQAD 148
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R +E P + +GK G+KWK++SE ++ PY +KA
Sbjct: 19 DPNAPKRGLSAYMFFANENRDKVREENP-GITFGQVGKMLGEKWKALSEDDRRPYEEKAA 77
Query: 98 NKKAEYE 104
K YE
Sbjct: 78 ADKKRYE 84
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKAHYEREMKTFIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ +
Sbjct: 63 MAKADKAHYEREMKTF 78
>gi|366996751|ref|XP_003678138.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
gi|342304009|emb|CCC71794.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
Length = 94
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PKK +KKD NAPKR LS+Y F R + PD + +GK G++WK+++
Sbjct: 8 PKKRTVRRKKDPNAPKRALSSYMFFANATRDIVRSENPDV-TFGQVGKLLGERWKALTPE 66
Query: 88 EKAPYVQKALNKKAEY 103
EK P+ KA K Y
Sbjct: 67 EKEPFELKAKQDKERY 82
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS-VAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPK+PLS+Y F +D R + P KS + +GK G++W +S ++K Y +
Sbjct: 572 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTYQK 631
Query: 95 KALNKKAEYELALEAYKKQ 113
KA +K Y+ + Y K+
Sbjct: 632 KAEQEKIRYQREMSLYNKK 650
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD NAPKR LSA+F F D R K P+ V + K G+KW M K+ Y Q A
Sbjct: 127 KDPNAPKRSLSAFFWFCHDERNKVKALNPEY-GVGDIAKELGRKWSDMDAEVKSKYEQMA 185
Query: 97 LNKKAEYELALEAYK-KQLNDNGAG 120
KA YE + YK K N+ G G
Sbjct: 186 EKDKARYEQEMTEYKLKCKNEQGGG 210
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAPYVQKAL 97
N P+ ++AY F++ R+ K+ P+ + + A + ++WK+M + EK + + A
Sbjct: 37 DNKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMAE 96
Query: 98 NKKAEYELALEAY 110
K YEL ++ Y
Sbjct: 97 KDKQRYELEMQNY 109
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK+E K KD NAPKRP SA+F+F +R K P S+ + K G+ W + +
Sbjct: 81 PKRETKKKFKDPNAPKRPPSAFFLFCSGYRPKIKGEHP-GLSIGDVAKKRGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 46 LSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYE 104
+S+Y F++ R+ K+ PD + + + K ++WK+MS EK + A+ KA YE
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAIADKARYE 72
Query: 105 LALEAY 110
++ Y
Sbjct: 73 REMKTY 78
>gi|237842875|ref|XP_002370735.1| high mobility group protein, putative [Toxoplasma gondii ME49]
gi|211968399|gb|EEB03595.1| high mobility group protein, putative [Toxoplasma gondii ME49]
Length = 644
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS-VAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPK+PLS+Y F +D R + P KS + +GK G++W +S ++K Y +
Sbjct: 565 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPTLKSDIGKVGKMIGEEWAKLSSSQKMTYQK 624
Query: 95 KALNKKAEYELALEAYKKQ 113
KA +K Y+ + Y K+
Sbjct: 625 KAEQEKIRYQREMSLYNKK 643
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD N PKRP A+F+F ++ KE PD S+ + K G+ W + +
Sbjct: 81 PKGETEKKFKDPNVPKRPPLAFFLFCSEYHPKIKEEHPD-LSIGDVAKILGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
+K PY +KA K +YE + AY
Sbjct: 140 DKQPY-EKAAKLKEKYEKDIAAY 161
>gi|402589796|gb|EJW83727.1| HMG box family protein [Wuchereria bancrofti]
Length = 274
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 15 HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMG 74
H LK K + P + KK SN KRP++A+ ++ + R+ E+ PD + A +
Sbjct: 65 HFGSLKVAKNSSTPYTDATNCKKSSNHIKRPMNAFMVWSQMERRKICETSPDMHN-AEIS 123
Query: 75 KAGGQKWKSMSEAEKAPYVQKA 96
K G +W+ +S++EKAPY+ +A
Sbjct: 124 KRLGLQWRQLSDSEKAPYIAEA 145
>gi|67484144|ref|XP_657292.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474548|gb|EAL51913.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 114
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
N PKRP + YFI++ + R S KE PD + + K ++WK++ E EK Y KA
Sbjct: 27 NRPKRPPTPYFIYLNEHRASIKEEHPDIR-FTEISKVASEQWKALGEEEKKEYQTKADAA 85
Query: 100 KAEYELALEAY 110
K +Y+ +E Y
Sbjct: 86 KEQYKKDMEKY 96
>gi|449670744|ref|XP_002158984.2| PREDICTED: high mobility group protein 20A-like [Hydra
magnipapillata]
Length = 312
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD NAPK PL+ Y ++ + R+ F+ PD + K GQKW S+ ++EK Y+ +A
Sbjct: 48 KDVNAPKAPLTGYVRYLNEHREKFRIENPD-MPFHEVTKILGQKWSSLDQSEKQQYLYEA 106
Query: 97 LNKKAEYELALEAYKK 112
K +Y AL+ Y++
Sbjct: 107 EKDKEKYMKALQGYQQ 122
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + + ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 87 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 145
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 146 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 188
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 28 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 87
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 88 MAKADKARYEREMKTY 103
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 50 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 108
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 109 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 151
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 50 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 108
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 109 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 151
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
+ ++KD +APK+PL+AYF++ D R + + N +VA + K G +WK +S+A K P
Sbjct: 116 RGKRRKDPDAPKKPLTAYFLYAADRRAALRAQN-RNATVADIAKIIGAEWKDLSDAVKKP 174
Query: 92 YVQKALNKKAEYELALEAYK 111
Y +A K++Y+ +E YK
Sbjct: 175 YQDRADRLKSQYQKEVELYK 194
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 25 ENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
+ +P++++A KKD N PK SAY F + R F + PD K + + K G W+ M
Sbjct: 23 QKRPRQKRA--KKDPNKPKNAQSAYMFFSQKVRPQFSKDNPD-KKMTDVSKLIGAAWREM 79
Query: 85 SEAEKAPYVQKALNKKAEYELALEAY 110
S+A K PY + A K Y+ + Y
Sbjct: 80 SDAAKKPYEEMARRDKQRYQHQMATY 105
>gi|384496847|gb|EIE87338.1| hypothetical protein RO3G_12049 [Rhizopus delemar RA 99-880]
Length = 157
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LS+Y ++ + R PD K++ + K G+ W +SE EK PYV++A
Sbjct: 42 DPNAPKRNLSSYMLYTQAVRPKVVAEHPDMKAIE-IAKFVGEMWNKLSEKEKMPYVKQAQ 100
Query: 98 NKKAEYELALEAYKKQL 114
+K +E +YK L
Sbjct: 101 KEKVRFEKENASYKDSL 117
>gi|320580355|gb|EFW94578.1| high-mobility group non-histone chromosomal protein, putative
[Ogataea parapolymorpha DL-1]
Length = 91
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + P + +GK G+KWK++ EA KAPY KA
Sbjct: 15 DPNAPKRSLSAYMFFANEQRDIVRAENP-GIAFGQIGKLLGEKWKALDEAGKAPYEAKAE 73
Query: 98 NKKAEYELALEAYKK 112
K YEL Y K
Sbjct: 74 ADKKRYELEKSEYTK 88
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G+ W + +K PY QKA
Sbjct: 92 DPNAPKRPPSAFFLFCSEHRPQIKSESP-GLSIGDTAKKLGEMWSEQTPKDKLPYEQKAA 150
Query: 98 NKKAEYELALEAYK 111
K +YE + AYK
Sbjct: 151 KLKEKYEKDVAAYK 164
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ + +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEE 62
Query: 95 KALNKKAEYELALEAY 110
A N K YE ++ Y
Sbjct: 63 MAKNDKVRYEREMKTY 78
>gi|406866133|gb|EKD19173.1| HMG box protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 525
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY IF R+ K N S + K G+ W+++S +E
Sbjct: 106 RKYRRHPKPDDNAPERPPSAYVIFSNKMREDLKGR---NLSFTEIAKLVGENWQNLSPSE 162
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY Q+A K Y L YKK
Sbjct: 163 KDPYEQQASAAKERYNNELAEYKK 186
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIPAYR 163
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F D R K P S+ + K G+ W + +K PY KA
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENP-GISIGDIAKKLGELWSKQTPKDKQPYEAKAG 150
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKST 129
K +YE + AY+ + +GAG D+ K +
Sbjct: 151 KLKEKYEKDVAAYRAK---SGAGGKSDAGKKS 179
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|409075359|gb|EKM75740.1| hypothetical protein AGABI1DRAFT_116212 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198009|gb|EKV47935.1| hypothetical protein AGABI2DRAFT_191645 [Agaricus bisporus var.
bisporus H97]
Length = 262
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
K+++ K KD NAPKRP S+Y +F + RK K+ P+ + A + WK MSE E
Sbjct: 68 KRKRNAKPKDPNAPKRPASSYILFQNEIRKQLKDQHPELTN-AELLNMISDIWKKMSEDE 126
Query: 89 KAPYVQKALNKKAEYELALEAY 110
KA Y + + K Y +AY
Sbjct: 127 KATYHKLVEDAKERYSQDKKAY 148
>gi|453086558|gb|EMF14600.1| hypothetical protein SEPMUDRAFT_148265 [Mycosphaerella populorum
SO2202]
Length = 396
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 15 HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFR----KSFKESFPDNKSV 70
H + A+K E +P K +D NAPKRPL+AYF ++ + R + +S P +
Sbjct: 94 HTPAVDAKKKEKRPYK-----PRDPNAPKRPLTAYFRYLREVRPFIAQEVAKSPPSEGTK 148
Query: 71 AA-MGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
A + K ++WK+M++A++ PY + Y A AYK
Sbjct: 149 AGDISKIATERWKAMTDAQRQPYHLAYQGEMGAYAEATRAYK 190
>gi|401412468|ref|XP_003885681.1| High mobility group protein 1, related [Neospora caninum Liverpool]
gi|325120101|emb|CBZ55655.1| High mobility group protein 1, related [Neospora caninum Liverpool]
Length = 98
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS-VAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPK+PLS+Y F +D R + P KS + +GK G++W +S ++K Y +
Sbjct: 19 KKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKLTYQK 78
Query: 95 KALNKKAEYELALEAYKKQ 113
KA +K Y+ + Y K+
Sbjct: 79 KAEQEKIRYQREMSLYNKK 97
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 69 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 127
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 128 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 170
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK + A
Sbjct: 12 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 71
Query: 97 LNKKAEYELALEAY 110
KA YE ++ Y
Sbjct: 72 KADKARYEREMKTY 85
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|366987315|ref|XP_003673424.1| hypothetical protein NCAS_0A04790 [Naumovozyma castellii CBS 4309]
gi|342299287|emb|CCC67037.1| hypothetical protein NCAS_0A04790 [Naumovozyma castellii CBS 4309]
Length = 555
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PKRP SAYF+F R E FPD K V + K +WK +++ EK P+ ++
Sbjct: 342 GPKRPSSAYFLFSMSIRNELLEQFPDAK-VPELSKLASARWKELTDDEKKPFYEEFRTNW 400
Query: 101 AEYELALEAYKKQL 114
+Y L + Y+K L
Sbjct: 401 EKYRLLRDEYEKTL 414
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRP + F ++ R + + PD K++ + K G+KW+ + +KA Y + +
Sbjct: 416 PKRPSGPFIQFTQEIRPTIVKENPD-KNLIEITKIIGEKWRELDPEKKAAYTETYKRRLK 474
Query: 102 EYE 104
E+E
Sbjct: 475 EWE 477
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|356514715|ref|XP_003526049.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 426
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK P+SAY +F D R + +N ++ + K ++WK+M+E +K PY + A K
Sbjct: 206 PKHPMSAYLLFTNDRRAALA---AENNNLLEVPKITSKEWKNMTEEQKRPYEEMAKKNKE 262
Query: 102 EYELALEAYKKQLNDNGAG 120
+Y L +EAY KQ D AG
Sbjct: 263 QYALQMEAY-KQKKDEEAG 280
>gi|225703820|gb|ACO07756.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 193
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P +K + KD NA KRP SA+FIF DFR K P S+ K G W S +
Sbjct: 80 PNGQKKKRFKDPNALKRPPSAFFIFCADFRAKIKSEHP-GLSIGDTAKKLGVMWNSSAAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +Y+ + +Y+
Sbjct: 139 EKKPYEKKAATLKEKYDKDIASYR 162
>gi|389582482|dbj|GAB65220.1| high mobility group protein putative [Plasmodium cynomolgi strain
B]
Length = 194
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D APKR LSAY +++D R + P+ K VA +GK G+ W +S A+K PY +KA
Sbjct: 115 DPLAPKRALSAYMFYVKDKRLELIKERPELAKDVAQVGKLVGEAWGKLSAAQKTPYEKKA 174
Query: 97 LNKKAEYELALEAYKK 112
K Y +E Y+K
Sbjct: 175 QLDKVRYSKEIEEYRK 190
>gi|269862534|ref|XP_002650876.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
gi|220065482|gb|EED43181.1| chromatin-associated protein [Enterocytozoon bieneusi H348]
Length = 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD NAPK+P S+Y +F + RK+ ++ V K G++W +++EAEK+ Y +
Sbjct: 7 KPKDKNAPKKPCSSYMLFGHELRKN--DATIKALRVTEQAKQIGERWNALTEAEKSEYEK 64
Query: 95 KALNKKAEYELALEAYK 111
KA+ K +Y LE +K
Sbjct: 65 KAMEAKEKYNQELEIFK 81
>gi|380471591|emb|CCF47205.1| HMG box protein [Colletotrichum higginsianum]
Length = 513
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R K N + + K G+ W++++ E
Sbjct: 103 RKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGR---NLTFTEIAKLVGEHWQNLTPGE 159
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY AL K +Y L YKK
Sbjct: 160 KEPYESSALKAKEKYNHDLAEYKK 183
>gi|82594869|ref|XP_725606.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23480678|gb|EAA17171.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 105
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD +APKR LSAY F ++ R P +K VA +GK G+ W + E EKAPY +K
Sbjct: 25 KDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLDEREKAPYEKK 84
Query: 96 ALNKKAEYE 104
A K YE
Sbjct: 85 AQEDKIRYE 93
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKS 83
A +PKK KKKD NAPKR LSAY F + R + PD + +GK G+KWK+
Sbjct: 3 APREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPD-ITFGQVGKKLGEKWKA 61
Query: 84 MSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
++ EK PY KA K YE E Y L
Sbjct: 62 LTPEEKLPYEAKAQADKKRYESEKELYNATL 92
>gi|310790717|gb|EFQ26250.1| HMG box protein [Glomerella graminicola M1.001]
Length = 500
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R K N + + K G+ W++++ E
Sbjct: 103 RKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGR---NLTFTEIAKLVGEHWQNLTPGE 159
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY AL K +Y L YKK
Sbjct: 160 KEPYETSALKAKEKYNHDLAEYKK 183
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 50 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
R K P S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 110 RPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|148226156|ref|NP_001084164.1| FACT complex subunit SSRP1 [Xenopus laevis]
gi|82175412|sp|Q9W602.1|SSRP1_XENLA RecName: Full=FACT complex subunit SSRP1; AltName: Full=DNA
unwinding factor 87 kDa subunit; Short=DUF87; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1; AltName: Full=Structure-specific recognition
protein 1
gi|4586285|dbj|BAA76333.1| DUF87 [Xenopus laevis]
Length = 693
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
++K +K KP+ A K KD APKRP+SAY +++ R+ K P S+ + K
Sbjct: 520 IVKQKKPRKKPE---AKKTKDPGAPKRPMSAYMLWLNASREKIKSENP-GISITDLSKKA 575
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
G+ WK+MS +K + ++A K +YE A++ Y
Sbjct: 576 GEIWKNMSRDKKEEWDRRAEEAKRDYEKAMKEY 608
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKEIAAYR 163
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|193787044|dbj|BAG51867.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 42 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 100
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 101 DKQPYEKKAAKLKEKYEKDIAAYR 124
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|339521847|gb|AEJ84088.1| TOX high mobility group box family member 4 [Capra hircus]
Length = 619
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 11 QKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV 70
+++P + +A K K K KKKD N P++P+SAY +F D + + K P N +
Sbjct: 192 RRQPPSQKTVVVEAGKKQKAPKRRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP-NATF 250
Query: 71 AAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
+ K W S+ E K +K K EY AL AYK
Sbjct: 251 GEVSKIVASMWDSLGEERKQVCKRKTEAAKKEYLKALAAYK 291
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|307192730|gb|EFN75838.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 205
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 108 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRSKMRELHPE-MGVGEIAKELGKLWMSTDL 166
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 167 QTKSKYMAIAEEDRARYEREIIAYNKRV 194
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD +APKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPSAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
+K PY +KA K +YE + AY
Sbjct: 140 DKQPYEKKASKLKEKYEKDIAAY 162
>gi|213405987|ref|XP_002173765.1| mismatch-binding protein cmb1 [Schizosaccharomyces japonicus
yFS275]
gi|212001812|gb|EEB07472.1| mismatch-binding protein cmb1 [Schizosaccharomyces japonicus
yFS275]
Length = 316
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKS--FKESF--PDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
KD + PK+PLS++ F + R+ FK+ P S+ K G+ WKS+S+ KAP+
Sbjct: 152 KDPSEPKKPLSSFLYFTQKLRQDPEFKQKLMGPAVYSITEFSKKAGEVWKSLSDDIKAPF 211
Query: 93 VQKALNKKAEYELALEAYKKQLNDNG 118
++ A ++A+Y+ E Y+K D G
Sbjct: 212 IEDAATRRAQYK---EEYEKWRKDTG 234
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGKHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK + KKKD +APKR LSAY F + R + P S +GK G+KWK+M+ +
Sbjct: 6 KKRASRKKKDPDAPKRSLSAYMFFANENRDIVRAENP-GISFGQVGKLLGEKWKAMTSDD 64
Query: 89 KAPYVQKALNKKAEYE 104
K PY KA K YE
Sbjct: 65 KTPYESKAEADKKRYE 80
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial [Bos
grunniens mutus]
Length = 190
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K GKKKD NAPKRP S +F+F +F K + P S+ + K G+ W ++S+++K
Sbjct: 81 KGGKKKDPNAPKRPPSGFFLFFSEFCSKIKSTNP-GISIGDVAKKLGEMWNNLSDSKKQL 139
Query: 92 YVQKALNKKAEYELALEAYKKQLN 115
Y+ K K +YE + YK + +
Sbjct: 140 YINKDAKLK-KYEKDVADYKGEFD 162
>gi|194068385|dbj|BAG55013.1| high mobility group 1 protein [Saccostrea kegaki]
Length = 201
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
++ PKRP SAYF F+ DFR+ K D+K + M G+ W+++ + EK P+ + A
Sbjct: 94 EAGKPKRPQSAYFCFLADFREKMKGKNIDHKEIIKM---AGEAWRNLDDNEKKPFEKLAQ 150
Query: 98 NKKAEYELALEAYKKQLNDNGAGVS 122
++ +YE AL +++ G G S
Sbjct: 151 KEQEKYEQALADWRR----GGGGAS 171
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K KD N PKR SAYF F+ R+ K S +A K KW M++ +K P+ +
Sbjct: 12 KAKDPNKPKRSTSAYFYFLGKMREDAKSSGKPITKIAEFTKESSAKWAKMTDKDKEPFNK 71
Query: 95 KALNKKAEYELALEAYK 111
KA K Y+ + YK
Sbjct: 72 KAAADKKRYDAEMAVYK 88
>gi|332025495|gb|EGI65658.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 204
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 107 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRSKMRELHPE-MGVGDIAKELGKLWMSTDL 165
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 166 QTKSKYMAIAEEDRARYEREIIAYNKRV 193
>gi|82753906|ref|XP_727864.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23483924|gb|EAA19429.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 126
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D APKR LSAY +++D R + P+ K VA +GK G+ W ++ A+KAPY +KA
Sbjct: 48 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 107
Query: 97 LNKKAEYELALEAYKK 112
K Y +E Y+K
Sbjct: 108 ELDKVRYSKEIEEYRK 123
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD N PKRP A+F+F ++ KE PD S+ + K G+ W + +
Sbjct: 81 PKGETEKKFKDPNVPKRPPLAFFLFCSEYHPKIKEEHPD-LSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
+K PY +KA K +YE + AY
Sbjct: 140 DKQPY-EKAAKLKEKYEKDIAAY 161
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|256090348|ref|XP_002581158.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|350646061|emb|CCD59339.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 293
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD + PKR SA+F F + FR + PD K V+ + K G++W+ S+ EK Y ++A
Sbjct: 94 KDPSMPKRSWSAFFFFCDAFRSKIRSEHPDWK-VSDIAKELGRRWEECSDKEK--YERRA 150
Query: 97 LNKKAEYELALEAYKKQL 114
N K YE +E YK L
Sbjct: 151 QNDKLRYEQDMEKYKAGL 168
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKS 83
A +PKK KKKD NAPKR LSAY F + R + PD + +GK G+KWK+
Sbjct: 3 APREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPD-ITFGQVGKKLGEKWKA 61
Query: 84 MSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
++ EK PY KA K YE E Y L
Sbjct: 62 LTPEEKQPYEAKAQADKKRYESEKELYNATL 92
>gi|3600053|gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D PK+P+SAY I+ + R + K +NKSV + K G++WK++SE +KAPY QK
Sbjct: 254 DPLKPKQPISAYLIYANERRAALK---GENKSVIEVAKMAGEEWKNLSEEKKAPYDQKT 309
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 16/95 (16%)
Query: 24 AENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKW 81
A+NK K E D N PK+P S+YF+F +D RKS E P +N +V A KW
Sbjct: 313 AKNKKKNENV----DPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTA---HISLKW 365
Query: 82 KSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+ E EK Y KA AE +EAYKK++ +
Sbjct: 366 MELGEEEKQVYNSKA----AEL---MEAYKKEVEE 393
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 50 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
R K P S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 110 RPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|384490121|gb|EIE81343.1| hypothetical protein RO3G_06048 [Rhizopus delemar RA 99-880]
Length = 286
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
P+ K K D++ PK P+SAY F + R K++ P++K V + + G KW+SM+E
Sbjct: 180 PRGRKKKKSTDTSLPKHPMSAYLHFAKTMRPIIKKNSPNSKLV-EISQQIGLKWRSMTEN 238
Query: 88 EKAPYVQKALNKKAEY 103
E P+++ A KA Y
Sbjct: 239 EMRPWIEMANEDKARY 254
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKR LSAY F + R++ +E P S +GK G++WK++S+ ++APY +KA
Sbjct: 23 NAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALSDKQRAPYEEKAAAD 81
Query: 100 KAEYE 104
K YE
Sbjct: 82 KKRYE 86
>gi|148707462|gb|EDL39409.1| mCG8212 [Mus musculus]
Length = 145
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K GKKKD NAPKRP S +F+F +F K + P S+ + K G+ WK++S++E A
Sbjct: 31 KGGKKKDPNAPKRPPSGFFLFCSEFHPKIKFTNP-GISIGDVAKKLGEMWKNLSDSE-AA 88
Query: 92 YVQKALNKKAEYELALEAYKKQLNDNGA 119
YV KA K + E + ++ + GA
Sbjct: 89 YVTKAAKLKEKDEKGVSDWQSKGKFEGA 116
>gi|344228278|gb|EGV60164.1| hypothetical protein CANTEDRAFT_110112 [Candida tenuis ATCC 10573]
Length = 89
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K+ KKKD +APKR LSAY F D R + P + +G+ G++WK+++ E
Sbjct: 4 RKKAVRKKKDPDAPKRSLSAYMFFANDNRDIVRAENP-GIAFGQVGRLLGERWKALTADE 62
Query: 89 KAPYVQKALNKKAEYE 104
K PY +KA + K YE
Sbjct: 63 KIPYEKKANDDKKRYE 78
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGNVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|294901568|ref|XP_002777418.1| high mobility group protein, putative [Perkinsus marinus ATCC
50983]
gi|239885050|gb|EER09234.1| high mobility group protein, putative [Perkinsus marinus ATCC
50983]
Length = 103
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 43 KRPLSAYFIFMEDFR-KSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
KR LSAYFIFM+ R K +E+ K + + K G+ WK MSEAEKAPY + A K
Sbjct: 33 KRALSAYFIFMQKNRQKIMEENGLQPKDIGEIAKKTGEMWKGMSEAEKAPYNKMADEDKQ 92
Query: 102 EYE 104
YE
Sbjct: 93 RYE 95
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 42 PKRP---LSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
PK+P +S+Y F++ R+ K+ PD + + + K ++WK+MS EK + A
Sbjct: 6 PKKPRGRMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 98 NKKAEYELALEAY 110
KA YE ++ Y
Sbjct: 66 ADKARYEREMKTY 78
>gi|356554781|ref|XP_003545721.1| PREDICTED: uncharacterized protein LOC100781233 [Glycine max]
Length = 602
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PK P+SAY F D R + NK++ + K ++WK+M+E +K PY + A K
Sbjct: 358 PKHPMSAYLFFTNDRRAALAAR---NKNLLEVPKITSEEWKNMAEEQKRPYEEMAKKNKE 414
Query: 102 EYELALEAYKKQLNDNGAG 120
+Y L +EAY KQ D AG
Sbjct: 415 QYALQMEAY-KQKKDEEAG 432
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + PD + +GK G+KWK+++ EK PY KA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPD-ITFGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 98 NKKAEYELALEAYKKQL 114
K YE E Y L
Sbjct: 76 ADKKRYESEKELYNATL 92
>gi|403215177|emb|CCK69677.1| hypothetical protein KNAG_0C05790 [Kazachstania naganishii CBS
8797]
Length = 210
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 9 VAQKKPHADMLKARKAENKP---KKEKAGKKKDS--NAPKRPLSAYFIFMEDFRKSFKES 63
+AQ + +LK+ K + KP + + +KD APKRP++AY ++ ++ R K+
Sbjct: 29 IAQWQASFTLLKSVKKQAKPLTPNQSRLNARKDVLKQAPKRPMTAYLLYCKEIRPGMKKE 88
Query: 64 FPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
PD K+ + K G+KW +SE + P+V++ AEY+ A++K L
Sbjct: 89 NPDLKTT-ELTKLFGEKWSELSEQARKPFVEQYEKDFAEYQKEKAAFEKTL 138
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+KEKA +K + PK+P + +F+F +D R S ++ PD + + QKW SM E+
Sbjct: 128 QKEKAAFEK-TLPPKKPAAPFFLFTKDVRSSVVDAHPDA-TFGEISTLVSQKWNSMEES- 184
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLND 116
KK EY + YKKQL +
Sbjct: 185 ----------KKEEYH---DLYKKQLKE 199
>gi|123368|sp|P07156.1|HMGB1_CRIGR RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|49483|emb|CAA68441.1| high mobility group protein [Cricetulus griseus]
Length = 180
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 27 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 85
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 86 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 128
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++ K P
Sbjct: 62 DMAKADKARYEREMKIYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
S+ + K G+ W + + +K P +KA K +YE + AY
Sbjct: 121 SIGDVAKKLGEMWNNTAAGDKQPCERKAAKLKVKYEKGIAAY 162
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
K++ KKKD +APKR LSAY F + R + P S +GK G+KWK+++ E
Sbjct: 7 KRKATRKKKDPDAPKRSLSAYMFFANENRDIVRAENP-GISFGQVGKLLGEKWKALTADE 65
Query: 89 KAPYVQKALNKKAEYE 104
K PY KA K YE
Sbjct: 66 KVPYENKAETDKKRYE 81
>gi|384500344|gb|EIE90835.1| hypothetical protein RO3G_15546 [Rhizopus delemar RA 99-880]
Length = 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 33 AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
A KK+D NAPK P + +F++ R + K+ P N+S+ + + GQKWK++++ EK Y
Sbjct: 46 AKKKRDPNAPKGPGNVFFLYCRMERDNIKDEVP-NESLGEVTRLLGQKWKALTKEEKQKY 104
Query: 93 VQKALNKKAEYELALEAY 110
+ EYE A+++Y
Sbjct: 105 YDIYKKEMEEYESAMKSY 122
>gi|56756178|gb|AAW26264.1| SJCHGC08557 protein [Schistosoma japonicum]
Length = 177
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD + PKR SA+F F + FR + PD K V+ + K G++W+ S+ EK Y Q+A
Sbjct: 94 KDPSMPKRSWSAFFFFCDAFRSKIRSEHPDWK-VSDIAKELGRRWEECSDKEK--YEQRA 150
Query: 97 LNKKAEYELALEAYKKQL 114
N K YE ++ YK L
Sbjct: 151 QNDKLRYEQDMQKYKGWL 168
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 17 DMLKARKAENK---------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTSYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-G 120
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 164
>gi|255715687|ref|XP_002554125.1| KLTH0E14850p [Lachancea thermotolerans]
gi|238935507|emb|CAR23688.1| KLTH0E14850p [Lachancea thermotolerans CBS 6340]
Length = 93
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK +KKD NAPKR LSAY F + R + P + +G+ G KWK++++ E
Sbjct: 8 KKRTTRRKKDPNAPKRALSAYMFFANENRDIVRAENP-GVTFGQVGRLLGDKWKALTDEE 66
Query: 89 KAPYVQKALNKKAEYELALEAY 110
K PY K K YE E Y
Sbjct: 67 KQPYEAKHAADKKRYESEKELY 88
>gi|403218017|emb|CCK72509.1| hypothetical protein KNAG_0K01480 [Kazachstania naganishii CBS
8797]
Length = 239
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
D L AR + K + K++D N PKRP +AY ++ E + +E N S+ K
Sbjct: 69 DELLARPFKRTKTKRQKAKERDPNLPKRPTNAYLLYCEMNKDKIRE----NGSLDVT-KD 123
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKST 129
+ WK +SE ++APY + + Y L +E Y K L G S + ST
Sbjct: 124 LTEGWKGLSEEQRAPYYKLYNEDRERYHLEMEQYAKSLGTTQGGHSTNGEGST 176
>gi|392512722|emb|CAD25487.2| HIGH MOBILITY GROUP PROTEIN [Encephalitozoon cuniculi GB-M1]
Length = 181
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 27 KPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKE--SFPDNKSVAAMGKAGGQKWKS 83
KP+ + A K+ KD NAPK+P+S YFIF ++ RK +E P VA G+A + WK
Sbjct: 8 KPRSKTAVKRRKDPNAPKKPMSGYFIFGQEQRKKNEELSRLP----VADQGRAISEMWKK 63
Query: 84 MSEAEKAPYVQKALNKKAEYELALEAYKK 112
+S+ E+ Y + + ++ Y+ +E YKK
Sbjct: 64 LSDEEREEYNKISNRERELYQARIEEYKK 92
>gi|307191139|gb|EFN74837.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 205
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 108 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRGKMRELHPE-MGVGDIAKELGKLWMSTDL 166
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 167 QTKSKYMAIAEEDRARYEREIIAYNKRV 194
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMSKADKARYEREMKTYISPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
+ KA YE ++ Y
Sbjct: 63 MSKADKARYEREMKTY 78
>gi|297706944|ref|XP_002830283.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pongo abelii]
Length = 125
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 34 GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYV 93
G K NAPKRPLS +F+F +F K + P S+ + K G+ W +++++EK PYV
Sbjct: 21 GGKNHPNAPKRPLSGFFLFCSEFCPKIKSTNP-GISIGDVVKKLGEMWNNLNDSEKQPYV 79
Query: 94 QKALNKKAEYELALEAYKKQLNDNGA-GVSEDSW 126
K + K +YE + YK + +G G ++ +W
Sbjct: 80 TK-VAKLKKYEKDVADYKSKGKLDGTKGPAKVAW 112
>gi|302414302|ref|XP_003004983.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356052|gb|EEY18480.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 220
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 20/110 (18%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R K N + + K G+ W+S+S E
Sbjct: 103 RKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGR---NLTFTEIAKLVGENWQSLSPVE 159
Query: 89 KAPYVQKALNKKAEY--ELA--------------LEAYK-KQLNDNGAGV 121
K P+ +ALN K +Y +LA L +K KQL+ N AG
Sbjct: 160 KEPFETQALNAKEKYNQDLAEYKKTYDYKKYAQYLHDFKQKQLHQNQAGC 209
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK EK + KD NAPKRP SA+FIF D+R K P S+ + K G+ W S S
Sbjct: 80 PKGEKKKRFKDPNAPKRPPSAFFIFCGDYRPKIKGENP-GLSIGDIAKKLGEMWNSSSAE 138
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
K PY +KA K +Y+ + Y+
Sbjct: 139 VKQPYEKKAAKLKEKYDKDIALYR 162
>gi|148682766|gb|EDL14713.1| mCG116825 [Mus musculus]
Length = 162
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 13 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 71
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 72 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 114
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + PD + +GK G+KWK+++ EK PY KA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPD-ITFGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 98 NKKAEYELALEAYKKQL 114
K YE E Y L
Sbjct: 76 ADKKRYESEKELYNATL 92
>gi|383858168|ref|XP_003704574.1| PREDICTED: putative high mobility group protein 1-like 10-like
[Megachile rotundata]
Length = 202
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 105 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRGKMRELHPE-MGVGDIAKELGKLWMSTDL 163
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 164 QTKSKYMAIAEEDRARYEREIIAYNKRV 191
>gi|156843619|ref|XP_001644876.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156115528|gb|EDO17018.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R K PD S +G+ G+KWK+M++ +K P+ KA
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPD-VSFGQVGRILGEKWKAMTDEDKQPFDAKAE 75
Query: 98 NKKAEYELALEAY 110
K YE E Y
Sbjct: 76 ADKKRYESEKELY 88
>gi|403286915|ref|XP_003934714.1| PREDICTED: high mobility group protein B1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286917|ref|XP_003934715.1| PREDICTED: high mobility group protein B1-like isoform 2 [Saimiri
boliviensis boliviensis]
gi|403286919|ref|XP_003934716.1| PREDICTED: high mobility group protein B1-like isoform 3 [Saimiri
boliviensis boliviensis]
gi|403286921|ref|XP_003934717.1| PREDICTED: high mobility group protein B1-like isoform 4 [Saimiri
boliviensis boliviensis]
Length = 206
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP A+F+F ++R K +P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEYP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + PD + +GK G+KWK+++ EK PY KA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPD-ITFGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 98 NKKAEYELALEAYKKQL 114
K YE E Y L
Sbjct: 76 ADKKRYESEKELYNATL 92
>gi|449685055|ref|XP_002156373.2| PREDICTED: high mobility group protein homolog TDP-1-like, partial
[Hydra magnipapillata]
Length = 218
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 11 QKKPHADMLKARKAENKPKKEKAGKK--KDSNAPKRPLSAYFIFMEDFRKSFK-ESFPDN 67
+K P+ + KA +KE KK KD N PKR +AYF F+ DFR+ K ++ +
Sbjct: 73 EKAPYYEKYNIDKARYLKEKEALDKKMGKDPNKPKRCQTAYFFFLHDFREQMKGKALLEG 132
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
+ + A+ G+KW+SM++ EK Y K YE A+E +K
Sbjct: 133 EKIPAL---AGEKWRSMTDDEKKVYNDMVQKDKQRYEKAMEEWK 173
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 43 KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAE 102
K+P SAY F+ D+R K+ V + K G W +M E EKAPY +K KA
Sbjct: 28 KKPTSAYIYFVSDYRLVLKKKGKATNKVNEVAKMCGTAWNAMKENEKAPYYEKYNIDKAR 87
Query: 103 YELALEAYKKQL 114
Y EA K++
Sbjct: 88 YLKEKEALDKKM 99
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
N PK+P SAYF+++ + R S KE PD K + K ++WK++ E EK Y KA
Sbjct: 24 NRPKKPQSAYFLYLNEHRASIKEEHPDIK-FTEISKVASEQWKALGEEEKKEYQAKADAA 82
Query: 100 KAEYELALEAY 110
+ +Y+ +E Y
Sbjct: 83 REQYKKDMEKY 93
>gi|392343504|ref|XP_003754904.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|392356039|ref|XP_003752197.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAP++P S++ +F D KE P N +VA + KA + W SE +K+ YV+KA
Sbjct: 89 DPNAPRKPPSSFLLFSMDHFDEIKEQHP-NWTVAQVAKAAKRMWSRCSEVDKSHYVEKAA 147
Query: 98 NKKAEYELALEAYKKQL 114
+A+Y EAY Q
Sbjct: 148 ILRAKYLEEREAYYHQC 164
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 37 KDSNA-PKRPLSAYFIFMEDFRKSFKESFPDN-KSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KDS PK +S Y FM DFR +E P++ + +KW+++SE EK Y
Sbjct: 3 KDSKVRPKVNVSPYVHFMMDFRNQMREQQPNSYYDFTEFSRKCSEKWRTISEQEKRKYEA 62
Query: 95 KALNKKAEYELALEAY 110
A + Y+ + Y
Sbjct: 63 LAKRDRDRYQREMRNY 78
>gi|322797845|gb|EFZ19753.1| hypothetical protein SINV_15148 [Solenopsis invicta]
Length = 220
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 123 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRGKMRELHPE-MGVGDIAKELGKLWMSTDL 181
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 182 QTKSKYMAIAEEDRARYEREIIAYNKRV 209
>gi|429855998|gb|ELA30933.1| hmg box [Colletotrichum gloeosporioides Nara gc5]
Length = 332
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKE+ + D NAPKRPL+ YF++M+ R + A+ + G ++WK+M+ E
Sbjct: 123 KKERKKRTHDPNAPKRPLTPYFLYMQTARPIIASDLGEQAPKGAVQEEGQRRWKAMNPVE 182
Query: 89 KAPYVQKALNKKAEYELAL-----EAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSE-I 142
KA + N +Y L L AYK+ N + + +++ +E S + + SE +
Sbjct: 183 KAGW-----NNAYQYNLRLYQARVHAYKQGGNQDARLMDDEAALKYAEEHSIQIAPSEAV 237
Query: 143 NDE 145
DE
Sbjct: 238 ADE 240
>gi|380025634|ref|XP_003696574.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Apis florea]
Length = 202
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 105 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRGKMRELHPE-MGVGDIAKELGKLWMSTDL 163
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 164 QTKSKYMAIAEEDRARYEREIIAYNKRV 191
>gi|351712970|gb|EHB15889.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 677
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 19 LKARKAENKPKKEK----AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMG 74
LK K PK K K KD + P++PLSAY +++ R+ K P S+A +
Sbjct: 519 LKKAKMAKDPKGHKKTVEVKKGKDPSVPEQPLSAYVLWLNASREMIKSEHP-GISIANLS 577
Query: 75 KAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
K G+ WK MS+ K + KA + + EYE A++ Y++ L
Sbjct: 578 KKAGEIWKGMSKTMKEEWGHKAEDVRLEYEKAVKEYERGL 617
>gi|449676214|ref|XP_002161760.2| PREDICTED: uncharacterized protein LOC100204080 [Hydra
magnipapillata]
Length = 325
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD NAPK PL+ Y ++ + R+ F+ PD + K GQKW S+ ++EK Y+ +A
Sbjct: 48 KDVNAPKAPLTGYVRYLNEHREKFRIENPD-MPFHEVTKILGQKWSSLDQSEKQQYLYEA 106
Query: 97 LNKKAEYELALEAYKK 112
K +Y AL+ Y++
Sbjct: 107 EKDKEKYMKALQGYQQ 122
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MAKADKVRYEREMKTY 78
>gi|444513275|gb|ELV10301.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM KA KA + PK E K KD NAPKRPL A+F+F ++
Sbjct: 49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPLLAFFLFCSEY 108
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAY 110
R K P S+ + K G+ W + + K PY +KA K +YE + AY
Sbjct: 109 RPQIKGEHP-GLSIGDVAKKLGEMWNNTAADGKQPYEKKAAKLKEKYEKDIAAY 161
>gi|448530095|ref|XP_003869985.1| Nhp6a non-histone chromatin component [Candida orthopsilosis Co
90-125]
gi|354547725|emb|CCE44460.1| hypothetical protein CPAR2_402610 [Candida parapsilosis]
gi|380354339|emb|CCG23854.1| Nhp6a non-histone chromatin component [Candida orthopsilosis]
Length = 93
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD +APKR LSAY F + R + P S +GKA G KWK++S +K PY
Sbjct: 13 KKKDPDAPKRSLSAYMFFANENRDIVRAENP-GISFGQVGKALGDKWKALSAEDKVPYEN 71
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 72 KAEADKKRYE 81
>gi|397788091|gb|AFO66694.1| SoxL1 [Leucosolenia complicata]
Length = 476
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
D AR E++ ++ + D++ PKRP++A+ + R+ P + + K
Sbjct: 78 DNTMARTHEDEQAQDNGQEAPDAHKPKRPMNAFLTWARTERRRLHGLLPGRMPNSEISKI 137
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELA 106
GQKWK M E+ KAPY ++A + EY A
Sbjct: 138 LGQKWKLMPESLKAPYYEQAAHASDEYHSA 167
>gi|302675841|ref|XP_003027604.1| hypothetical protein SCHCODRAFT_237889 [Schizophyllum commune H4-8]
gi|300101291|gb|EFI92701.1| hypothetical protein SCHCODRAFT_237889 [Schizophyllum commune H4-8]
Length = 312
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M KA E P+ +A + +D APKRP +A+ +F D+ K ES + K + +
Sbjct: 21 MAKADPVEKSPRPTRATRVEDDGAPKRPANAFMLFRSDYLKQHPESRSEQK---GLSRKA 77
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
G W+++ KA Y ++ A Y++ + YKK+L
Sbjct: 78 GAAWRALPARAKAIYEAQSRENSARYKVQKQEYKKRL 114
>gi|324504241|gb|ADY41831.1| SWI/SNF-related matrix-associated actin-dependent regulator
chromatin subfamily E member 1 [Ascaris suum]
Length = 404
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 26 NKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
++P + +G K AP RPL Y F + PD++ + +GK GQ W+
Sbjct: 40 SRPSGQDSGSLKPPKAPDRPLVPYMRFSRKMWAKVRSEHPDSQ-LWDIGKVIGQMWRDAP 98
Query: 86 EAEKAPYVQKALNKKAEYELALEAY 110
E+EKA Y Q+ +K EYE AL+AY
Sbjct: 99 ESEKAIYQQEYEIEKTEYEKALKAY 123
>gi|328790254|ref|XP_624266.2| PREDICTED: putative high mobility group protein B1-like 1-like
[Apis mellifera]
Length = 202
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 105 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRGKMRELHPE-MGVGDIAKELGKLWMSTDL 163
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 164 QTKSKYMAIAEEDRARYEREIIAYNKRV 191
>gi|97976795|tpe|CAJ29302.1| TPA: putative high mobility group B3 protein [Schistosoma mansoni]
Length = 246
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD + PKR SA+F F + FR + PD K V+ + K G++W+ S+ EK Y ++A
Sbjct: 94 KDPSMPKRSWSAFFFFCDAFRSKIRSEHPDWK-VSDIAKELGRRWEECSDKEK--YERRA 150
Query: 97 LNKKAEYELALEAYKKQL 114
N K YE +E YK L
Sbjct: 151 QNDKLRYEQDMEKYKAGL 168
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK-------PKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + P K + KK KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPHKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY + A K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWTNTAADDKQPYGKMAAKLKEKYEKDIAAYR 163
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 95 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 153
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 154 DKQPYEKKAAKLKEKYEKDIAAYR 177
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 17 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 76
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 77 MAKADKVRYEREMKTY 92
>gi|346979250|gb|EGY22702.1| hypothetical protein VDAG_04140 [Verticillium dahliae VdLs.17]
Length = 516
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R K N + + K G+ W+S+S E
Sbjct: 103 RKYRRHPKPDENAPERPPSAYVLFSNKMRDDLKGR---NLTFTEIAKLVGENWQSLSPVE 159
Query: 89 KAPYVQKALNKKAEY 103
K P+ +ALN K +Y
Sbjct: 160 KEPFETQALNAKEKY 174
>gi|156848961|ref|XP_001647361.1| hypothetical protein Kpol_1018p32 [Vanderwaltozyma polyspora DSM
70294]
gi|156118047|gb|EDO19503.1| hypothetical protein Kpol_1018p32 [Vanderwaltozyma polyspora DSM
70294]
Length = 194
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PKRP+ ++ +F++ R + + +P K + K G++W+++SE EK P+V+
Sbjct: 52 GPKRPIPSFMLFVKSIRGNLTQEYPHYKP-TEIAKLCGERWRALSEYEKRPFVE------ 104
Query: 101 AEYELALEAYK 111
EYE ALE YK
Sbjct: 105 -EYEKALEDYK 114
>gi|448106088|ref|XP_004200660.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
gi|448109217|ref|XP_004201291.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
gi|359382082|emb|CCE80919.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
gi|359382847|emb|CCE80154.1| Piso0_003256 [Millerozyma farinosa CBS 7064]
Length = 301
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
+D + PKRP +AY IF E R+ K D + K+ + WK++ + ++ PY +
Sbjct: 137 RDPDLPKRPTNAYLIFCEMERERIKNEIDDTSGTPDLSKSLTEAWKNLDDEKRKPYYKLY 196
Query: 97 LNKKAEY--ELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEINDEAEQEFSSQV 154
+ + Y E+ L +KQL D+ S + + + G +S + E E++ + +
Sbjct: 197 EDDRDRYQREMTLYNQRKQLEDDTKNESSPKRQKIDDSEPGVENSKDTKSELEEDENVNL 256
Query: 155 SSYF 158
+S
Sbjct: 257 TSEI 260
>gi|340711910|ref|XP_003394509.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Bombus terrestris]
gi|350402612|ref|XP_003486543.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Bombus impatiens]
Length = 202
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSE 86
+P + + +D +APKR LSA+F F ++ R +E P+ V + K G+ W S
Sbjct: 105 RPTRRGTKRYRDKDAPKRALSAFFYFCQELRGKMRELHPE-MGVGDIAKELGKLWMSTDL 163
Query: 87 AEKAPYVQKALNKKAEYELALEAYKKQL 114
K+ Y+ A +A YE + AY K++
Sbjct: 164 QTKSKYMAIAEEDRARYEREIIAYNKRV 191
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KK+D NAPKRP S +F+F +F + + P S+ + K G+ W + S++EK PY
Sbjct: 86 KKRDPNAPKRPPSGFFLFCSEFCPKIRSNNP-GISIGDVAKKLGEMWNNKSDSEKQPYNT 144
Query: 95 KALNKKAEYELALEAYKKQLNDNGA-GVSEDSWK 127
KA K +YE + YK + +GA G ++ WK
Sbjct: 145 KAT--KLKYEKDVADYKSKGKFDGAMGPAKVFWK 176
>gi|116180486|ref|XP_001220092.1| hypothetical protein CHGG_00871 [Chaetomium globosum CBS 148.51]
gi|88185168|gb|EAQ92636.1| hypothetical protein CHGG_00871 [Chaetomium globosum CBS 148.51]
Length = 359
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKE+ + D NAPKRPL+ YF++M+ R D A+ G ++W M+ AE
Sbjct: 141 KKERKKRTHDPNAPKRPLTPYFLYMQTARPIIANDLGDQVPKGAVQDEGQRRWSVMTPAE 200
Query: 89 KAPYVQKALNKKAEYELAL-----EAYK------KQLNDNGAGVSEDSW 126
K N+ +Y L L +YK K+++D+ A + D +
Sbjct: 201 KL-----GWNQAYQYNLRLYNARVHSYKNGNPNAKEMSDDDARIYADQF 244
>gi|414585863|tpg|DAA36434.1| TPA: hypothetical protein ZEAMMB73_396569 [Zea mays]
Length = 119
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
K+K KR L+ +F F+ +FR + E P+ K V + KA G+KW+SMS+ EKA Y
Sbjct: 12 KRKKVGGAKRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|328874899|gb|EGG23264.1| PHD zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 758
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 17 DMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKA 76
D K A+ +K+ K+ PK ++A+F ++ D R++ K + P+ S+A + K
Sbjct: 336 DEKKMEIAKQMRQKQIDEIKEKITKPKTNVTAFFHYLNDNRETEKRAQPE-LSLADISKV 394
Query: 77 GGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
GQKW+ +++ EK PY KA + + ++ + YKKQ+ D
Sbjct: 395 LGQKWRVLTDDEKKPYHTKAADDRVRFDADIIEYKKQIQD 434
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAVD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|403217833|emb|CCK72326.1| hypothetical protein KNAG_0J02470 [Kazachstania naganishii CBS
8797]
Length = 92
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK + +KKD NAPKR LSAY F + R + PD + +G+ G++WK++
Sbjct: 7 KKRQTRRKKDPNAPKRALSAYMFFANENRDIVRSENPD-VTFGQIGRLLGERWKALDGEG 65
Query: 89 KAPYVQKALNKKAEYELALEAY 110
+ PY KA K YE E Y
Sbjct: 66 REPYEAKAAADKKRYESEKELY 87
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++ K P
Sbjct: 11 DMAKADKARYEREMKTYISPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGERP-GL 69
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ K G+ W S + +K PY KA K +YE + Y+
Sbjct: 70 SIGDAAKKLGETWNSTAAEDKQPYETKAAKLKEQYEKDIADYR 112
>gi|255073265|ref|XP_002500307.1| set domain protein [Micromonas sp. RCC299]
gi|226515569|gb|ACO61565.1| set domain protein [Micromonas sp. RCC299]
Length = 1496
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 27 KPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS-VAAMGKAGGQKWKSMS 85
K KE ++ KRP++A+FIF ++ R E P+ ++ ++A+GK G++W+ +S
Sbjct: 658 KGSKESRDAAANAAGIKRPMTAFFIFSQEQRALLIEQRPELRTNISAVGKLMGERWRKLS 717
Query: 86 EAEKAPYVQKALNKKAEY 103
+ EK PY KA + EY
Sbjct: 718 DEEKFPYAIKAEEARHEY 735
>gi|203465|gb|AAA40927.1| HMG box (bp. 1168..1428), partial [Rattus norvegicus]
Length = 561
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP+SAY +++ R+ K P S+ + K G+ WK MS+ +K + +K
Sbjct: 395 DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKAGEIWKGMSKEKKEEWDRKGE 453
Query: 98 NKKAEYELALEAYK 111
+ + EYE A++ Y+
Sbjct: 454 DARREYEEAMKEYE 467
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE AY+
Sbjct: 121 SIGDVAKKLGEMWNNTASDDKQPYEKKAAKLKEKYEKDTAAYR 163
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S +F+F +FR K S S+ + K G+ W ++++++K PY+ KA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIK-STNLGISIGDVAKKLGEMWNNLNDSKKQPYITKAA 147
Query: 98 NKKAEYELALEAYK 111
K +YE + YK
Sbjct: 148 KLKEKYEKDVADYK 161
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 207 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 265
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 266 KEKYEKDIAAYR 277
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ + A
Sbjct: 119 DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 178
Query: 97 LNKKAEYELALEAY 110
+ KA Y+ ++ Y
Sbjct: 179 KSDKARYDREMKNY 192
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 87 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 145
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 146 DKQPYEKKAAKLKEKYEKDIAAYR 169
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + +E P S +GK G++WK+++E ++ PY + A
Sbjct: 20 DPNAPKRGLSAYMFFANEQRDNVREENP-GISFGQVGKVLGERWKALNEKQRGPYEESAA 78
Query: 98 NKKAEYE 104
K YE
Sbjct: 79 KDKKRYE 85
>gi|238586980|ref|XP_002391336.1| hypothetical protein MPER_09251 [Moniliophthora perniciosa FA553]
gi|215455859|gb|EEB92266.1| hypothetical protein MPER_09251 [Moniliophthora perniciosa FA553]
Length = 269
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 32 KAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAP 91
K + KD NAPKRP S+Y I+ + R++ KE P N S A + Q+W MSE EK
Sbjct: 68 KRKRTKDPNAPKRPASSYIIYQNEVRQTIKEQHP-NLSPAEIRTLISQEWAKMSEEEKEY 126
Query: 92 YVQKALNKKAEYELALEAY 110
Y + A K +Y AY
Sbjct: 127 YRKNAQIAKDKYTAEKAAY 145
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KKD NAPKRP S +F+F + R K P + + K G+ W +++++ K PY+ K
Sbjct: 89 KKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSF-GIGDVAKKLGEAWNNLTDSSKQPYLAK 147
Query: 96 ALNKKAEYELALEAYKKQLN-DNGAGVS 122
A K +Y + YK+ GAG S
Sbjct: 148 ANKLKEKYRKDVADYKRGTGKPGGAGAS 175
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D+ PK +SAY F++ R+ K+ P+ + + K +WK+MS EK+ +
Sbjct: 3 KGDARKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
+A KA YE + +Y
Sbjct: 63 QANQDKARYESEMTSY 78
>gi|443710428|gb|ELU04681.1| hypothetical protein CAPTEDRAFT_155070 [Capitella teleta]
Length = 269
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK K + D+NAPK+PL+ Y F+ D R+ +E P + + + K G +W +
Sbjct: 12 PKGRKRKRVHDANAPKQPLTGYVRFLSDRREQIREENP-SATFTEITKRLGAEWSKLPPM 70
Query: 88 EKAPYVQKALNKKAEYELALEAYKK 112
EK Y+ +A K Y LEAY +
Sbjct: 71 EKQRYLDEAERDKERYLKELEAYHQ 95
>gi|449550188|gb|EMD41153.1| hypothetical protein CERSUDRAFT_111715 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 20 KARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQ 79
K R AE+ +++ K KD NAPKRP S+Y +F D R K FPD + + +
Sbjct: 77 KGRGAEDGEGRKRVKKVKDPNAPKRPASSYLLFQNDVRGELKGKFPDMPNNELLNHI-SE 135
Query: 80 KWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
WK M +K Y Q+ K ++ L AY+ + D
Sbjct: 136 LWKKMPPEQKDAYEQRQRMAKDQWMLQKTAYEARGPD 172
>gi|426215132|ref|XP_004001831.1| PREDICTED: high mobility group protein B4 [Ovis aries]
Length = 196
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +AP+RP S++ +F +D K P + SV + KA G+ W + ++ +K PY Q+A
Sbjct: 91 DPHAPRRPPSSFLLFCQDHYAQLKSENP-SWSVVQVAKASGKMWSAKTDVDKQPYEQRAA 149
Query: 98 NKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSSEIND 144
+A+Y L Y+ Q + E +T++ + + + S+ D
Sbjct: 150 LLRAKYREELSVYRNQFKPRKMRLQE---LATNQCRGLEQAESDTTD 193
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN-KSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K+D PK +S+Y F+ ++R FKE P+ + +KW+S+S+ EKA Y
Sbjct: 5 KRDHLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 64
Query: 95 KALNKKAEYELALEAY 110
A KA Y+ + Y
Sbjct: 65 LAKLDKARYQEEMMNY 80
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 167 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 225
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 226 KEKYEKDIAAYR 237
>gi|340923867|gb|EGS18770.1| hypothetical protein CTHT_0053790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 576
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R+ K N S M K G+ W++++ E
Sbjct: 106 RKYRRHPKPDENAPERPPSAYVLFANKMREDLKGR---NLSFTEMAKLVGENWQNLTPEE 162
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K PY +A K +Y L YKK
Sbjct: 163 KEPYETQAQRCKDKYLAELAEYKK 186
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + + K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 LAKSDKARYDREMKNY 78
>gi|158297853|ref|XP_318023.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|158297857|ref|XP_001689081.1| AGAP004789-PA [Anopheles gambiae str. PEST]
gi|157014526|gb|EAA13138.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|157014528|gb|EDO63498.1| AGAP004789-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KK++ KD+NAPK PL+ Y +M + R+ ++ P N + + K ++W +SE
Sbjct: 61 KKKRQKAPKDANAPKHPLTGYVRYMNEHREGVRQKHP-NLTPIEVTKIMAEEWSKLSEER 119
Query: 89 KAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGK---SSSSEINDE 145
K PY++ A K Y + YK + +S + EV K SS +N +
Sbjct: 120 KKPYLEAAEVDKERYNKEISEYKLNNEAKAKALQNESQVAKKEVTGPKVVISSIPYVNGK 179
Query: 146 AEQEFSSQ 153
EQ+ + Q
Sbjct: 180 VEQKVARQ 187
>gi|427775732|gb|AFY63289.1| mitochondrial transcription factor A, partial [Ctenopharyngodon
idella]
Length = 164
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
RPL+AY ++++ + SF P K+V + K +KW+ ++ +K P+ +L + +Y
Sbjct: 1 RPLTAYMTYVKEMQPSFSRQNPGLKNVDIIRKLA-EKWRMLTPEQKQPFQDASLVSREQY 59
Query: 104 ELALEAYKKQLND-NGAGVSED 124
+LALE YK QL A ++E+
Sbjct: 60 KLALETYKAQLTPAQTAAIAEE 81
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P S+ + K G+ W + +
Sbjct: 81 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|195382183|ref|XP_002049810.1| GJ20542 [Drosophila virilis]
gi|194144607|gb|EDW61003.1| GJ20542 [Drosophila virilis]
Length = 397
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
APK PL++Y FM D R+ + P N++ K G++W ++E KAPY++ A K
Sbjct: 82 APKMPLNSYVRFMNDRREQLRREHP-NRTALEHTKMIGEEWHQLTEDRKAPYMEAAAKDK 140
Query: 101 AEYELALEAYKKQ 113
A Y+ + + K+
Sbjct: 141 ALYQEQMHKFLKE 153
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 94 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 152
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 153 KEKYEKDIAAYR 164
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|298707551|emb|CBJ30135.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 458
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 20 KARKAENKPKKEKAGK--KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
+ARKAE K +E K +KDS PK P S+Y +F + SFK + P S+ + A
Sbjct: 337 RARKAEYKAGRELVSKMSRKDSARPKGPQSSYIVFYTEKMASFKAARP-GMSITDIATAV 395
Query: 78 GQKWKSMSEAEKAPYVQKALNKKAEYE 104
G+ W+ +S+ K PY +KA + YE
Sbjct: 396 GEAWRRLSDEMKLPYTKKAEADRKRYE 422
>gi|225426010|ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-like [Vitis vinifera]
Length = 505
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 45 PLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYE 104
P+SA+F+F ++ R + ++K+V + K G++WK+M+E +K PY + A KA+Y+
Sbjct: 299 PVSAFFLFSKERRAAL---LGEDKNVLEIAKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQ 355
Query: 105 LALEAYKKQLNDNGAGV 121
+E YK+Q ++ +
Sbjct: 356 EEMELYKQQKDEEAEDL 372
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S++ +F ++ R SF + P +N ++ A+ KWK + E E+ K
Sbjct: 421 DPNKPKKPASSFLLFSKEARNSFLQERPGINNSTLNALISV---KWKELDEEER-----K 472
Query: 96 ALNKKAEYELALEAYKKQL---NDNGAGVSE 123
N KA+ A+EAY+K+L N + A +S+
Sbjct: 473 IWNDKAKE--AMEAYQKELEEYNKSAATISD 501
>gi|169869341|ref|XP_001841237.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
gi|116497705|gb|EAU80600.1| hypothetical protein CC1G_11400 [Coprinopsis cinerea okayama7#130]
Length = 255
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP S+Y +F + R K P N + + +KWK+M++ +K Y Q+ L
Sbjct: 73 DPNAPKRPASSYILFQNEVRNELKRQNP-NLTNPELLTLISEKWKNMTDEQKETYNQQML 131
Query: 98 NKKAEYELALEAY 110
K EY A AY
Sbjct: 132 KAKEEYSQAKNAY 144
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A N KA Y+ ++ Y
Sbjct: 63 MAKNDKARYDREMKNY 78
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N + +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKARGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +APKRP S +F+F + R K + P SV + K G+ W +++++EK PY+ KA
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNP-GISVGDVAKKLGEMWNNLNDSEKQPYITKAA 124
Query: 98 NKKAEYE 104
K +YE
Sbjct: 125 KLKEKYE 131
>gi|302767286|ref|XP_002967063.1| hypothetical protein SELMODRAFT_144662 [Selaginella moellendorffii]
gi|300165054|gb|EFJ31662.1| hypothetical protein SELMODRAFT_144662 [Selaginella moellendorffii]
Length = 430
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 9 VAQKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
+ QK+ ++ KA KAE P+K KA K + PK+ +AY +F ++RK + P K
Sbjct: 315 LKQKEKEDEVKKAMKAEKAPRKAKA-KTAEPGKPKKAATAYILFGMEYRKKLQAEMPTAK 373
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND--NGAGVS 122
A + KW M EK PYV +A +K +Y+ A+E +K+ D +GA S
Sbjct: 374 -FAELTALVASKWNEMGAEEKQPYVDQAGVEKQKYQEAMEEFKRLSPDPKDGATTS 428
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 44 RPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEY 103
RP + Y + E+ R + +N V +GK G++W+SM E +APY + A + KA Y
Sbjct: 222 RPTTGYMAYSEERRPAL---MNENLKVPQIGKILGEEWRSMDEKARAPYEKIATDAKATY 278
Query: 104 ELALEAYKK 112
+EAY K
Sbjct: 279 LTEMEAYNK 287
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 43 KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAE 102
K+PLS+YF++ D R+ + P N + + G+ WKS+S+ EK PY + K E
Sbjct: 105 KKPLSSYFLWCNDQREKVRAQNP-NAGIKDLSSIFGELWKSVSDEEKKPYEEIYQKNKEE 163
Query: 103 Y 103
Y
Sbjct: 164 Y 164
>gi|19074377|ref|NP_585883.1| HIGH MOBILITY GROUP PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449329470|gb|AGE95742.1| high mobility group protein [Encephalitozoon cuniculi]
Length = 201
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 27 KPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
KP+ + A K+ KD NAPK+P+S YFIF ++ RK +E VA G+A + WK +S
Sbjct: 28 KPRSKTAVKRRKDPNAPKKPMSGYFIFGQEQRKKNEEL--SRLPVADQGRAISEMWKKLS 85
Query: 86 EAEKAPYVQKALNKKAEYELALEAYKK 112
+ E+ Y + + ++ Y+ +E YKK
Sbjct: 86 DEEREEYNKISNRERELYQARIEEYKK 112
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G+ W +K PY QKA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHP-GLSIGDTAKKLGEMWSEQLAKDKQPYEQKAA 149
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 150 KLKEKYEKDIAAYR 163
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A + ++WK+MS EK + +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEE 62
Query: 95 KALNKKAEYELALEAY 110
A KA Y+ ++ Y
Sbjct: 63 MAKGDKARYDREMKNY 78
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 175
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 176 KEKYEKDIAAYR 187
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK +
Sbjct: 27 KGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKPKFED 86
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 87 MAKSDKARYDREMKNY 102
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G++W + +K P+ QKA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETP-GLSIGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 151 KLKEKYEKDVAAYR 164
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MAKGDKVRYEREMKTY 78
>gi|355687725|gb|EHH26309.1| hypothetical protein EGK_16239 [Macaca mulatta]
Length = 209
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ P++ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEG 62
Query: 95 KALNKKAEYELALEAY 110
A + K Y+ ++ Y
Sbjct: 63 MAKSDKVRYDREMKNY 78
>gi|281202543|gb|EFA76745.1| PHD zinc finger-containing protein [Polysphondylium pallidum PN500]
Length = 604
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 11 QKKPHADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV 70
Q+K A AR+ ++ +EK K + K ++ +F ++ + R+ K++ PD S+
Sbjct: 179 QQKEAAKYEIARRERDRLIEEK---KAEIPKIKSAVTPFFHYLNENREIEKKNQPD-MSL 234
Query: 71 AAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+ + K G KWK+M+E EKAPY +K+ + K YE+ + Y +++ +
Sbjct: 235 SEISKLLGNKWKAMNEEEKAPYFEKSQDDKRRYEVEIVEYNRKIKE 280
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+F+F + R K P S+ K G++W + +K P+ QKA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETP-GLSIGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 151 KLKEKYEKDVAAYR 164
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK +
Sbjct: 3 KGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MAKGDKVRYEREMKTY 78
>gi|451847653|gb|EMD60960.1| hypothetical protein COCSADRAFT_98214 [Cochliobolus sativus ND90Pr]
Length = 106
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R+ +E P K +GK G+KWK+++E ++ PY KA
Sbjct: 24 DPNAPKRGLSAYMFFANEQREKVREDNPGIK-FGEVGKLLGEKWKALNEKQRQPYEAKAA 82
Query: 98 NKKAEYELALEAY 110
K YE AY
Sbjct: 83 LDKKRYEQEKAAY 95
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 81 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 139
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 140 KEKYEKDIAAYR 151
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 46 LSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYE 104
+S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ + A + KA Y+
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYD 60
Query: 105 LALEAY 110
++ Y
Sbjct: 61 REMKNY 66
>gi|401826764|ref|XP_003887475.1| HMG domain-containing chromatin-associated protein [Encephalitozoon
hellem ATCC 50504]
gi|395459993|gb|AFM98494.1| HMG domain-containing chromatin-associated protein [Encephalitozoon
hellem ATCC 50504]
Length = 181
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 27 KPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKE--SFPDNKSVAAMGKAGGQKWKS 83
KPK + A K+ KD NAPK+P+S YFIF ++ RK +E P VA G+A + WK
Sbjct: 8 KPKSKTAVKRRKDPNAPKKPMSGYFIFGQEQRKKNEELSKLP----VAEQGRAISEMWKK 63
Query: 84 MSEAEKAPYVQKALNKKAE-YELALEAYKK 112
+++ E+ Y K NK+ E Y+ +E YKK
Sbjct: 64 LTDEEREEY-NKISNKERELYQAKVEEYKK 92
>gi|378732156|gb|EHY58615.1| hypothetical protein HMPREF1120_06620 [Exophiala dermatitidis
NIH/UT8656]
Length = 294
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 18 MLKARKAENKP---KKEKAGKKK------DSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
+L R AE P + E GKKK D NAPKR L+ YF++M+ R + + D
Sbjct: 79 LLGGRPAEAAPAPVEPEGDGKKKRKRTPHDPNAPKRALTPYFLYMQSARATIAKELGDQA 138
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
+ G ++W MS AEK+ + K A Y + + AYK
Sbjct: 139 KPKEVADEGTRRWTEMSPAEKSVWDDKYQKNLAAYRVKMAAYK 181
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ P++ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|309265997|ref|XP_003086707.1| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 433
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 17 DMLKARKAENK---------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDN 67
DM KA KA K PK E K KD NAPKRP SA+F+F + K PD
Sbjct: 60 DMAKADKARYKRKIKTYIPPPKGEIKKKFKDPNAPKRPPSAFFLFYSVYYPKIKGEHPD- 118
Query: 68 KSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 119 LSIGDVAKKLGEMWNNAAADDKQPYEKKAAKLKEKYEKDIAAYR 162
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
D P+ +S+Y FM+ RK K+ PD + + + K ++WK+MS EK + A
Sbjct: 3 DPKKPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 62
Query: 97 LNKKAEYELALEAY 110
KA Y+ ++ Y
Sbjct: 63 KADKARYKRKIKTY 76
>gi|394337181|gb|AFN27605.1| high mobility group protein 1 [Azumapecten farreri]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 34 GKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYV 93
GK D PKRP +AYF+F+ DFRK K S +K + K G +W+ +++ +K PY
Sbjct: 92 GKVIDPTKPKRPQTAYFLFLGDFRKKMKNSNIGHKDII---KQAGAEWRQLTDQDKKPYE 148
Query: 94 QKA--LNKKAEYEL 105
++ L KK + EL
Sbjct: 149 DQSQILQKKYDEEL 162
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 22 RKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKW 81
R + + P K K K KD+N PKR SAYF F+ R K + + +A K +W
Sbjct: 3 RPSADSPTKRKR-KPKDANRPKRATSAYFFFLAHCRAEAKTTGRNVSKIADFTKEASAQW 61
Query: 82 KSMSEAEKAPYVQKALNKKAEYELALEAYKKQLND 116
+SM+ ++K + +A KA Y+ + +K ++ D
Sbjct: 62 RSMTSSDKKQFDDRAAKDKARYDAEMAVFKGKVID 96
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 94 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 152
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 153 KEKYEKDIAAYR 164
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|195154374|ref|XP_002018097.1| GL17523 [Drosophila persimilis]
gi|390179748|ref|XP_001361671.2| GA14726 [Drosophila pseudoobscura pseudoobscura]
gi|194113893|gb|EDW35936.1| GL17523 [Drosophila persimilis]
gi|388859956|gb|EAL26250.2| GA14726 [Drosophila pseudoobscura pseudoobscura]
Length = 113
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
PKRPLSAY +++ + R+S K+ P +K V + K GG+ W+ + +K + QKA+ K
Sbjct: 8 PKRPLSAYMLWLNETRESIKKENPGSK-VTDIAKRGGELWRGLK--DKTEWEQKAIKMKE 64
Query: 102 EYELALEAY 110
EY A++ Y
Sbjct: 65 EYNRAVKEY 73
>gi|403295709|ref|XP_003938773.1| PREDICTED: high mobility group protein B2 [Saimiri boliviensis
boliviensis]
Length = 158
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 101 KEKYEKDIAAYR 112
>gi|356494961|ref|XP_003516349.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 178
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGK 75
D N PKRP + +F+F++DFRKSFKE+ PD+K +GK
Sbjct: 99 DPNMPKRPPTTFFVFLDDFRKSFKEANPDSKDAKRVGK 136
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F +FR K P S+ + K G+ W + +
Sbjct: 81 PKGESKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHP-GLSIGDVAKKLGEMWNNTAGD 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K P+ +KA K +YE + AY+
Sbjct: 140 DKQPFEKKAAKLKEKYEKDIAAYR 163
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK + +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEE 62
Query: 95 KALNKKAEYELALEAY 110
A K YE ++ Y
Sbjct: 63 MAKGDKVRYEREMKNY 78
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K +D NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A+ KP++++A K KD N PKRP +A+ +++ + R K P K + + K GG+
Sbjct: 532 AKTVSEKPRQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGIK-ITEIAKKGGEM 590
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSS 140
WK + +K+ + KA K EY A++ Y+ +G SED S + + K +SS
Sbjct: 591 WKELK--DKSEWEGKAAKAKEEYNKAMKEYEA----SGGSKSEDKKSSEKKAPAKKKTSS 644
>gi|410930380|ref|XP_003978576.1| PREDICTED: transcription factor A, mitochondrial-like [Takifugu
rubripes]
Length = 279
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 39 SNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
S PKRPL+ Y ++ + + FPD K+V M K Q+W+ +S +K P+ + +L
Sbjct: 49 SGPPKRPLNGYMRYVLQQQPMVSKQFPDTKTVDIMRKIA-QQWRMLSPEQKQPFEEASLQ 107
Query: 99 KKAEYELALEAYKKQLN 115
+ ++++ L+ Y++QL
Sbjct: 108 AREQFKVDLQHYREQLT 124
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 5 RVVAVAQKKPHADMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDF 56
+ ++ +K DM KA KA + PK E K KD NAPKRP SA+F+F ++
Sbjct: 50 KTMSAKEKGKFEDMAKADKAPYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 109
Query: 57 RKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
R K P S+ + K G+ W + + +K PY +KA K +Y+ + AY+
Sbjct: 110 RPKIKGE-PPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYDKDIAAYR 163
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK+E K KD NAPKR S +F+F ++R K P S + K G+ W + +
Sbjct: 81 PKEETKKKFKDPNAPKRAPSTFFLFCSEYRPKIKGEHP-GLSTGDVAKKLGEMWNNTAAG 139
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
+K PY +KA K +YE + AY+
Sbjct: 140 DKQPYEKKAAELKEKYEKDIAAYR 163
>gi|260803411|ref|XP_002596583.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
gi|229281842|gb|EEN52595.1| hypothetical protein BRAFLDRAFT_154496 [Branchiostoma floridae]
Length = 710
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPK+ ++A+ +++ R ++ PD S+ +GK G+KW+ M ++K + QKA
Sbjct: 543 DPNAPKKAMTAFMLWLNATRSELRKENPD-ASIGEIGKIAGEKWREMGPSDKEEWEQKAK 601
Query: 98 NKKAEYELALEAYK 111
K Y+ A+E Y+
Sbjct: 602 EDKERYKAAMEEYQ 615
>gi|344235655|gb|EGV91758.1| High mobility group protein B2 [Cricetulus griseus]
Length = 159
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 101 KEKYEKDIAAYR 112
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKD +APKR LSAY F + R + P S +GK G+KWK+++ EK PY
Sbjct: 11 KKKDPDAPKRSLSAYMFFANENRDIVRAENP-GISFGQVGKLLGEKWKALTGEEKGPYEN 69
Query: 95 KALNKKAEYE 104
KA K YE
Sbjct: 70 KAEADKKRYE 79
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 21 ARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
A+ KP++++A K KD N PKRP +A+ +++ + R K P K + + K GG+
Sbjct: 660 AKTVSEKPRQKRAKKSKDENKPKRPSTAFMLWLNEMRDKIKADNPGIK-ITEIAKKGGEM 718
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDSWKSTSEVQSGKSSSS 140
WK + +K+ + KA K EY A++ Y+ +G SED S + + K +SS
Sbjct: 719 WKELK--DKSEWEGKAAKAKEEYNKAMKEYEA----SGGSKSEDKKSSEKKAPAKKKTSS 772
>gi|444732758|gb|ELW73033.1| High mobility group protein B2 [Tupaia chinensis]
Length = 234
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 127 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 185
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 186 KEKYEKDIAAYR 197
>gi|195025405|ref|XP_001986052.1| GH21151 [Drosophila grimshawi]
gi|193902052|gb|EDW00919.1| GH21151 [Drosophila grimshawi]
Length = 744
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKKDSN PKRP +A+ +++ D R+ K P K V + K GG+ WK + +K+ + +
Sbjct: 553 KKKDSNKPKRPTTAFMLWLNDTREQIKRDNPGIK-VTEIAKKGGEMWKELK--DKSKWDE 609
Query: 95 KALNKKAEYELALEAYK--KQLNDNGAGVSEDSWKSTSEVQSGKSSSSE 141
A K Y+ + YK K+ N +G+G +KS + S+SSE
Sbjct: 610 AASKDKQRYQDEMRNYKPVKKSNTSGSG-----FKSKEYISDEDSTSSE 653
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 128 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSQQSAKDKQPYEQKAAKL 186
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 187 KEKYEKDIAAYR 198
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ KE PD+ A K ++WK+MS EK+ +
Sbjct: 38 KGDPNKPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKTMSAKEKSKFEG 97
Query: 95 KALNKKAEYELALEAY 110
A + K Y+ ++ Y
Sbjct: 98 MAKSGKVRYDREMKNY 113
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEHSVKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 152 KEKYEKDIAAYR 163
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALN 98
N P+ +S+Y F++ R+ K+ PD+ + A K ++WK+MS EK+ + A +
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKS 66
Query: 99 KKAEYELALEAY 110
KA Y+ ++ Y
Sbjct: 67 DKARYDREMKNY 78
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 28 PKKEKA---GKK----KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQK 80
PK EK GKK KD NAPKR LSA+F F D R K P+ V + K G+K
Sbjct: 312 PKGEKVTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKMLNPEY-GVGDIAKELGKK 370
Query: 81 WKSMSEAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVS 122
W K Y A KA YE + AYKK+ D G GV
Sbjct: 371 WSDAGPELKGKYEAMAEKDKARYEREMTAYKKKQKD-GPGVC 411
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEA 87
+++K G K S P+ ++AY F++ R+ K+ PD V K +WK+MS+
Sbjct: 229 QQDKRGAK--STKPRGRMTAYAFFVQTCRQEHKKKHPDENIVFQEFSKKCALRWKTMSDK 286
Query: 88 EKAPYVQKALNKKAEYELALEAY 110
EK + + A K Y+ +++Y
Sbjct: 287 EKKRFHEMAEKDKKRYDTEMQSY 309
>gi|354484377|ref|XP_003504365.1| PREDICTED: high mobility group protein B2-like [Cricetulus griseus]
Length = 264
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 147 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 205
Query: 100 KAEYELALEAYK 111
K +YE + AY+
Sbjct: 206 KEKYEKDIAAYR 217
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 100 KAEYELALEAY 110
K +YE + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D N P+ +S+Y F++ R+ K PD+ + K ++WK+MS E + +
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKRKHPDSSVNFVEFSKKCSERWKTMSAKENSKFED 62
Query: 95 KALNKKAEYELALEAY 110
A + KA Y+ ++ Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 28 PKKEKAG--KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMS 85
PK KA +KKD NAPKRP SA+F+F + R K P + + K G W +
Sbjct: 81 PKGSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNP-GMGIGDIAKQLGLLWGKQT 139
Query: 86 EAEKAPYVQKALNKKAEYELALEAYKKQLNDNGAGVSEDS 125
+K P+ KA K +YE + AYK + GAG + S
Sbjct: 140 PKDKLPHEAKATKLKEKYEKDVAAYKAK---GGAGATAKS 176
>gi|367043776|ref|XP_003652268.1| hypothetical protein THITE_2065779 [Thielavia terrestris NRRL 8126]
gi|346999530|gb|AEO65932.1| hypothetical protein THITE_2065779 [Thielavia terrestris NRRL 8126]
Length = 354
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKE+ + D NAPKRPL+ YF++M+ R D A+ G ++W M+ AE
Sbjct: 135 KKERKKRTHDPNAPKRPLTPYFLYMQTARPIIANDLGDQVPKGAVQDEGQRRWSVMTPAE 194
Query: 89 KAPYVQKALNKKAEYELAL 107
K N+ +Y L L
Sbjct: 195 KL-----GWNQAYQYNLRL 208
>gi|254580675|ref|XP_002496323.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
gi|238939214|emb|CAR27390.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
Length = 98
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + PD + +G+ G+KWK+++ EK PY KA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRAENPD-VTFGQVGRILGEKWKALTPDEKTPYEAKAE 75
Query: 98 NKKAEYELALEAY 110
K YE E Y
Sbjct: 76 ADKKRYESEKELY 88
>gi|297742312|emb|CBI34461.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 45 PLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYE 104
P+SA+F+F ++ R + ++K+V + K G++WK+M+E +K PY + A KA+Y+
Sbjct: 180 PVSAFFLFSKERRAAL---LGEDKNVLEIAKIAGEEWKNMTEKQKRPYEEIAKKNKAKYQ 236
Query: 105 LALEAYKKQLNDNGAGV 121
+E YK+Q ++ +
Sbjct: 237 EEMELYKQQKDEEAEDL 253
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFP--DNKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
D N PK+P S++ +F ++ R SF + P +N ++ A+ KWK + E E+ K
Sbjct: 302 DPNKPKKPASSFLLFSKEARNSFLQERPGINNSTLNALISV---KWKELDEEER-----K 353
Query: 96 ALNKKAEYELALEAYKKQL---NDNGAGVSE 123
N KA+ A+EAY+K+L N + A +S+
Sbjct: 354 IWNDKAKE--AMEAYQKELEEYNKSAATISD 382
>gi|146414776|ref|XP_001483358.1| hypothetical protein PGUG_04087 [Meyerozyma guilliermondii ATCC
6260]
gi|146391831|gb|EDK39989.1| hypothetical protein PGUG_04087 [Meyerozyma guilliermondii ATCC
6260]
Length = 317
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK----SVAAMGKAGGQKWKS 83
P+K+K +KD NAPK+PL+ YF F R++ +E N S M + ++W S
Sbjct: 146 PEKKKRKVEKDPNAPKKPLTIYFAFSFHTRETIREERKKNNEPPLSAVEMNELVKERWNS 205
Query: 84 MSEAEKAPYVQKALNKKAEYELALEAYKKQL 114
+S EK+ + +K N+ EY+ A EAY+ +L
Sbjct: 206 ISAEEKSQWQKKYQNELKEYQKAKEAYQGKL 236
>gi|32335|emb|CAA78938.1| HMG2B [Homo sapiens]
Length = 186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 40 NAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNK 99
NAPKRP SA+F+F + R K P S+ K G+ W S +K PY QKA
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHP-GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 128
Query: 100 KAEYELALEAY 110
K +YE + AY
Sbjct: 129 KEKYEKDIAAY 139
>gi|367018942|ref|XP_003658756.1| hypothetical protein MYCTH_2294934 [Myceliophthora thermophila ATCC
42464]
gi|347006023|gb|AEO53511.1| hypothetical protein MYCTH_2294934 [Myceliophthora thermophila ATCC
42464]
Length = 521
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
+K + K D NAP+RP SAY +F R+ K N S A + K G+ W+++S AE
Sbjct: 106 RKYRRHPKPDENAPERPPSAYVLFSNKMREELKGR---NLSFAEIAKLVGENWQNLSAAE 162
Query: 89 KAPYVQKALNKKAEYELALEAYKK 112
K P+ +A K +Y L YKK
Sbjct: 163 KEPFEARAQAIKDKYLADLAEYKK 186
>gi|338712138|ref|XP_001497140.3| PREDICTED: FACT complex subunit SSRP1 [Equus caballus]
Length = 680
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 18 MLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAG 77
M K RK+ KP + K GK D NAPKRP+SAY +++ R+ K P S+ + K
Sbjct: 525 MAKDRKSRKKPMEVKKGK--DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKA 581
Query: 78 GQKWKSMSEAEK 89
G+ WK MS+ +K
Sbjct: 582 GEIWKGMSKEKK 593
>gi|347962987|ref|XP_311155.4| AGAP000005-PA [Anopheles gambiae str. PEST]
gi|333467412|gb|EAA06432.5| AGAP000005-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKA 96
KD NAPKR LSA+F F D R K P+ V + K G+KW M K Y Q A
Sbjct: 306 KDPNAPKRSLSAFFWFCHDERNKVKALNPE-YGVGDIAKELGRKWSDMDAEIKQKYEQMA 364
Query: 97 LNKKAEYELALEAYKKQLNDNGAGVS 122
K YE + YK + + GV+
Sbjct: 365 EKDKQRYEQEMTEYKLKCKNEQGGVT 390
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 33 AGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSV-AAMGKAGGQKWKSMSEAEKAP 91
AG K N P+ ++AY F++ R+ K+ P+ + + A + ++WK+M + EK
Sbjct: 210 AGGKVKDNKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQR 269
Query: 92 YVQKALNKKAEYELALEAY 110
+ + A KA YEL +++Y
Sbjct: 270 FHEMAEKDKARYELEMQSY 288
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPKRP SA+F+F ++ K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS E+ +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEEGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|294891767|ref|XP_002773728.1| high mobility group protein, putative [Perkinsus marinus ATCC
50983]
gi|239878932|gb|EER05544.1| high mobility group protein, putative [Perkinsus marinus ATCC
50983]
Length = 103
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 43 KRPLSAYFIFMEDFR-KSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKA 101
KR LSAYFIFM+ R K +E+ K + + K G+ WK MSEAEK PY + A K
Sbjct: 33 KRALSAYFIFMQKNRQKIMEENGLQPKDIGDIAKKTGEMWKGMSEAEKTPYNKMADEDKQ 92
Query: 102 EYE 104
YE
Sbjct: 93 RYE 95
>gi|428671805|gb|EKX72720.1| high mobility group protein, putative [Babesia equi]
Length = 94
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KKD NAPKR LS+Y F ++ R P+ K VA++G+ G W ++ E EKAP+ +
Sbjct: 17 KKDPNAPKRALSSYMFFAKEKRAEIIAENPELAKDVASVGRLIGAAWNALDEKEKAPFEK 76
Query: 95 KALNKKAEYE 104
A KA YE
Sbjct: 77 LAEEDKARYE 86
>gi|50292849|ref|XP_448857.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528170|emb|CAG61827.1| unnamed protein product [Candida glabrata]
Length = 503
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PKRP SAYF+F R + FPD K V + K +W+ +S+ EK PY +
Sbjct: 305 GPKRPSSAYFLFSMSIRNELLQQFPDAK-VPELSKLASARWRELSDDEKKPYYDEFRTNW 363
Query: 101 AEYELALEAYKKQL 114
+Y + + Y+K L
Sbjct: 364 EKYRVLRDEYEKTL 377
>gi|389633193|ref|XP_003714249.1| high mobility group protein [Magnaporthe oryzae 70-15]
gi|351646582|gb|EHA54442.1| high mobility group protein [Magnaporthe oryzae 70-15]
gi|440467255|gb|ELQ36487.1| high mobility group protein [Magnaporthe oryzae Y34]
gi|440489585|gb|ELQ69224.1| high mobility group protein [Magnaporthe oryzae P131]
Length = 344
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 29 KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAE 88
KKE+ ++ D NAPKRPL+ YF++M+ R + + + A+ + G ++W +MS E
Sbjct: 120 KKERKKRQHDPNAPKRPLTPYFLYMQTARPIIADDLGADAAKGAVQEEGQRRWSTMSARE 179
Query: 89 KA 90
KA
Sbjct: 180 KA 181
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKR LSAY F + R + PD + +G+ G++WK+++ EK PY KA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPD-VTFGQVGRLLGERWKALTPDEKTPYESKAE 75
Query: 98 NKKAEYELALEAY 110
K YE E Y
Sbjct: 76 ADKKRYESEKELY 88
>gi|367020072|ref|XP_003659321.1| hypothetical protein MYCTH_2296180 [Myceliophthora thermophila ATCC
42464]
gi|347006588|gb|AEO54076.1| hypothetical protein MYCTH_2296180 [Myceliophthora thermophila ATCC
42464]
Length = 348
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 14 PHADMLKARKAENKP----KKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKS 69
P+ ++ A A +P KKE+ + D NAPKRPL+ YF++M+ R D
Sbjct: 97 PYGGVVPATAAVPQPPAEEKKERKKRSHDPNAPKRPLTPYFLYMQTARPIIANDLGDQVP 156
Query: 70 VAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELAL 107
A+ G ++W MS EK + N+ +Y L L
Sbjct: 157 KGAVQDEGQRRWSVMSPQEK-----QGWNQAYQYNLRL 189
>gi|344243983|gb|EGW00087.1| High mobility group protein B4 [Cricetulus griseus]
Length = 106
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +AP++P S++ +F D K P N SV + KA G+ W S +K PY QKA
Sbjct: 15 DPHAPRQPPSSFLLFSLDHYAQLKHDNP-NWSVVQVAKATGKMWSMTSNVDKQPYEQKAA 73
Query: 98 NKKAEYELALEAYKKQLND--NGAGVSEDSWK 127
+A+Y +E Y+KQ N G + +S K
Sbjct: 74 LLRAKYFEDVENYRKQFQKKRNVQGYARNSLK 105
>gi|384501419|gb|EIE91910.1| hypothetical protein RO3G_16621 [Rhizopus delemar RA 99-880]
Length = 183
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 35 KKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
KK+D NAPK P + +F++ R + K+ P N+S+ + + GQKWK++++ EK Y
Sbjct: 48 KKRDPNAPKGPGNVFFLYCRMERDNIKDEVP-NESLGEVTRLLGQKWKALTKEEKQKYYD 106
Query: 95 KALNKKAEYELALEAY 110
+ EYE A+++Y
Sbjct: 107 IYKKEMEEYESAMKSY 122
>gi|291001785|ref|XP_002683459.1| HMG-box domain-containing protein [Naegleria gruberi]
gi|284097088|gb|EFC50715.1| HMG-box domain-containing protein [Naegleria gruberi]
Length = 521
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 37 KDSNAP----KRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPY 92
KD+N KRPL+AY IF + F+E +PD ++ + K G+KWKS+S EK PY
Sbjct: 399 KDNNGKYSRVKRPLNAYNIFCKVHFPEFQEQYPD-LTINQISKFIGEKWKSLSNDEKQPY 457
Query: 93 VQKALNKKAEYELALEAY 110
++K+ N + L AY
Sbjct: 458 IEKSKNSTPVLKKPLNAY 475
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 25 ENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSM 84
E +P EK+ K + K+PL+AY IF + F++ P N ++ + K + WKS+
Sbjct: 453 EKQPYIEKS--KNSTPVLKKPLNAYNIFCKIHFLEFQQQHP-NLTINQISKKVAEAWKSL 509
Query: 85 SEAEKAPY 92
SE EK Y
Sbjct: 510 SEEEKNSY 517
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 215
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K +D NAPKRP SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYIPPKGETKKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY +KA K +YE + AY+
Sbjct: 121 SIGDVAKKLGKMWSNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 36 KKDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQ 94
K D P+ +S+Y F++ R+ K+ PD + + + K ++WK+MS EK +
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 95 KALNKKAEYELALEAY 110
A KA YE ++ Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|303389712|ref|XP_003073088.1| high mobility group protein [Encephalitozoon intestinalis ATCC
50506]
gi|303302232|gb|ADM11728.1| high mobility group protein [Encephalitozoon intestinalis ATCC
50506]
Length = 181
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 9/90 (10%)
Query: 27 KPKKEKAGKK-KDSNAPKRPLSAYFIFMEDFRKSFKE--SFPDNKSVAAMGKAGGQKWKS 83
KP+ + A KK KD NAPK+P+S YFIF ++ RK +E P VA G++ + WK
Sbjct: 8 KPRSKAAVKKRKDPNAPKKPMSGYFIFGQEQRKKNEELSKLP----VADQGRSISEMWKK 63
Query: 84 MSEAEKAPYVQKALNKKAEYELA-LEAYKK 112
+S+ E+ Y K NK+ E LA +E YKK
Sbjct: 64 LSDEEREEY-NKISNKERELYLAKVEEYKK 92
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP SA+FIF +FR K P S+ + K G+ W S + +K PY +KA
Sbjct: 91 DPNAPKRPPSAFFIFCSEFRPKVKGESP-GLSIGDVAKRLGEMWNSTAAEDKQPYEKKAA 149
Query: 98 NKKAEYELALEAYK 111
K +YE + AY+
Sbjct: 150 KLKEKYEKDIAAYR 163
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 37 KDSNAPKRPLSAYFIFMEDFRKSFKESFPD-NKSVAAMGKAGGQKWKSMSEAEKAPYVQK 95
KD P+ +S+Y F++ R+ K+ P+ + + A K ++WK+MS EK +
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 96 ALNKKAEYELALEAY 110
A KA YE + Y
Sbjct: 63 ARQDKARYEREMMNY 77
>gi|17537205|ref|NP_496970.1| Protein HMG-1.1 [Caenorhabditis elegans]
gi|3702826|gb|AAC78598.1| high mobility group protein 1.1 [Caenorhabditis elegans]
gi|15718335|emb|CAB54448.2| Protein HMG-1.1 [Caenorhabditis elegans]
Length = 95
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 31 EKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKA 90
+K GK KD NAPKR +SA+F +M++ R+ K+ VA + KA G +W ++ +K+
Sbjct: 17 KKGGKAKDPNAPKRAMSAFFFWMQENRERIKKP---GMGVADVAKAAGVEWGKLT--DKS 71
Query: 91 PYVQKALNKKAEYELALEAYKK 112
+ +KA + K YE+ + YKK
Sbjct: 72 RWEKKAADDKKRYEVDIANYKK 93
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 17 DMLKARKAENK--------PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNK 68
DM KA KA + PK E K KD NAPK P SA+F+F ++R K P
Sbjct: 62 DMAKADKARYEREMKTYISPKGETKKKFKDPNAPKTPPSAFFLFCSEYRPKIKGEHP-GL 120
Query: 69 SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKKAEYELALEAYK 111
S+ + K G+ W + + +K PY + A K +YE + AY+
Sbjct: 121 SIGDVVKKLGEMWTNTAADDKQPYEKMAAKLKEKYEKDIAAYR 163
>gi|354476918|ref|XP_003500670.1| PREDICTED: high mobility group protein B4-like [Cricetulus griseus]
Length = 180
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D +AP++P S++ +F D K P N SV + KA G+ W S +K PY QKA
Sbjct: 89 DPHAPRQPPSSFLLFSLDHYAQLKHDNP-NWSVVQVAKATGKMWSMTSNVDKQPYEQKAA 147
Query: 98 NKKAEYELALEAYKKQLND--NGAGVSEDSWK 127
+A+Y +E Y+KQ N G + +S K
Sbjct: 148 LLRAKYFEDVENYRKQFQKKRNVQGYARNSLK 179
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 42 PKRPLSAYFIFMEDFRKSFKESFPDNK-SVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
PK +S+Y FM ++R FKE P+ + +KW+S+S+ EKA Y A K
Sbjct: 9 PKVNVSSYIHFMLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68
Query: 101 AEYELALEAY 110
A Y+ + Y
Sbjct: 69 ARYQEEMMNY 78
>gi|444731734|gb|ELW72082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 28 PKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEA 87
PK E K KD NAPKRP SA+F+F ++R K P + + K G+ W + +
Sbjct: 75 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLPIGDVAKKLGEMWINTAAD 133
Query: 88 EKAPYVQKALNKKAEYELALEAYK 111
EK PY +KA K +YE + AY+
Sbjct: 134 EKQPYEKKAAKLKEKYEKDIAAYQ 157
>gi|195123073|ref|XP_002006034.1| GI20809 [Drosophila mojavensis]
gi|193911102|gb|EDW09969.1| GI20809 [Drosophila mojavensis]
Length = 388
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 41 APKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKALNKK 100
APK PL++Y FM D R+ + P N++ K G++W +++ KAPY++ A K
Sbjct: 63 APKMPLNSYVRFMNDRREQLRREHP-NRTALEHTKMIGEEWHQLTDERKAPYLEAAAKDK 121
Query: 101 AEYELALEAYKKQ 113
A Y+ + + K+
Sbjct: 122 ALYQEQMHKFLKE 134
>gi|440800724|gb|ELR21759.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 128
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 38 DSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMGKAGGQKWKSMSEAEKAPYVQKAL 97
D NAPKRP + Y F + R KE PD + K KWK MSE EK PY+ A
Sbjct: 28 DPNAPKRPKTGYIFFSAEERVKVKEDNPD-LGFGDITKQVSAKWKDMSEEEKEPYLTLAK 86
Query: 98 NKKAEYELALEAYK 111
K YE + YK
Sbjct: 87 KDKERYEKEMSKYK 100
>gi|312070764|ref|XP_003138297.1| HMG box family protein [Loa loa]
gi|307766542|gb|EFO25776.1| HMG box family protein [Loa loa]
Length = 526
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 15 HADMLKARKAENKPKKEKAGKKKDSNAPKRPLSAYFIFMEDFRKSFKESFPDNKSVAAMG 74
H LK K + P + KK SN KRP++A+ ++ + R+ E+ PD + A +
Sbjct: 76 HFGSLKVAKNSSTPYTDATNCKKSSNHIKRPMNAFMVWSQMERRKICETSPDMHN-AEIS 134
Query: 75 KAGGQKWKSMSEAEKAPYVQKA 96
K G +W+ +S+ EKAPY+ +A
Sbjct: 135 KRLGLQWRQLSDTEKAPYIAEA 156
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.306 0.121 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,485,541,542
Number of Sequences: 23463169
Number of extensions: 92639025
Number of successful extensions: 393407
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 4400
Number of HSP's that attempted gapping in prelim test: 383559
Number of HSP's gapped (non-prelim): 9601
length of query: 168
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 40
effective length of database: 9,355,909,735
effective search space: 374236389400
effective search space used: 374236389400
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 71 (32.0 bits)