BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044277
(308 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 28/255 (10%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL Q+D L F + ++YG +F++ LG RP +++ + +EA FS R +
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKI 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHM--LSANRTEQFRQVQTDEIFRMIEKIS 160
+ + G+ + N W+ +++ VT M + ++Q +E +IE++
Sbjct: 83 AMVDPFFRGY-GVIFA-NGNRWKVLRRFSVTTMRDFGMGKRSVEERIQ-EEAQCLIEELR 139
Query: 161 KLSAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAE 220
K S ++ + + ++ NII + FGKRF + + L ++F +
Sbjct: 140 K-------------SKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKML-NLFYQ 185
Query: 221 TQAMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKV 277
T +++ VF + F G +L G +R++ N + + +E H LDP P+
Sbjct: 186 TFSLISSVFGQLFELFSG-FLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPR- 243
Query: 278 AEQEDLIDVLLGEMK 292
DLID L M+
Sbjct: 244 ----DLIDTYLLHME 254
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 122/258 (47%), Gaps = 26/258 (10%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
N+ Q+DA +++ K S+ YGP+F++ LG +PT+V+ + KEA +F+ R ++
Sbjct: 23 NILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSV 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFR-MIEKISK 161
+K+S LG+ + + +W+EM++ + + + ++ + + E R ++E++ K
Sbjct: 83 PILEKVSKG-LGIAFS-NAKTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEARCLVEELRK 140
Query: 162 LSAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAET 221
+A P ++ P N +I ++IF F + ++E + LH E
Sbjct: 141 TNASPCDPT--FILGCAPCN-------VICSVIFHNRFDYK-DEEFLKLMESLH----EN 186
Query: 222 QAMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVA 278
++G +L+ F LD G ++ L N + +++H LD P+
Sbjct: 187 VELLGTPWLQVYNNFPA-LLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPR-- 243
Query: 279 EQEDLIDVLLGEMKTADD 296
D ID L +M+ ++
Sbjct: 244 ---DFIDCFLIKMEQENN 258
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 33/274 (12%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL QL+ N+ F +L++++GP+F+L +G + +V+ K KEA + +FS R L
Sbjct: 23 NLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDL 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQ--VQTDEIFRMIEKIS 160
+ P +W+++++ +T + + +Q + +Q + F ++E +
Sbjct: 83 PAFHAHRDRGIIFNNGP---TWKDIRRFSLTTLRNYGMGKQGNESRIQREAHF-LLEALR 138
Query: 161 KLSAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAE 220
K P ++ P N +I +I+FR F D RL +F E
Sbjct: 139 KTQGQPFDPT--FLIGCAPCN-------VIADILFRKHF-----DYNDEKFLRLMYLFNE 184
Query: 221 TQAMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKV 277
++ +L+ F +L L G +R++ N ++ + + +++H LDP P+
Sbjct: 185 NFHLLSTPWLQLYNNFPS-FLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPR- 242
Query: 278 AEQEDLIDVLLGEMK----TADDHQTFDSIKSTI 307
DL D LL EM+ +A+ T D I T+
Sbjct: 243 ----DLTDCLLVEMEKEKHSAERLYTMDGITVTV 272
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 30/262 (11%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
N+ Q+D ++ F SK YGP+F++ G P +V + KEA + +FS R
Sbjct: 23 NMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNS 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLS---ANRTEQFRQVQTDEIFRMIEKI 159
+Q+++ LG+ ++ + W+E+++ +T + + R+ + R VQ +E ++E++
Sbjct: 83 PISQRITKG-LGI-ISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDR-VQ-EEAHCLVEEL 138
Query: 160 SKLSAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFA 219
K A P ++ P N+I V F KRF+ + ++ L F
Sbjct: 139 RKTKASPCDPT--FILGCAPC-----------NVICSVVFQKRFDYKDQNFLT-LMKRFN 184
Query: 220 ETQAMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPK 276
E ++ +++ C F +D G + ++ N + ++ +++H LD P+
Sbjct: 185 ENFRILNSPWIQVCNNF-PLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPR 243
Query: 277 VAEQEDLIDVLLGEMKTADDHQ 298
D ID L +M+ D+Q
Sbjct: 244 -----DFIDCFLIKMEQEKDNQ 260
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 24/254 (9%)
Query: 46 QLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALSGT 105
+D N +CF +L +++G +FSL+L + P +V++ +EA H + RP + T
Sbjct: 26 HVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85
Query: 106 QKLSYN--FLGLTLTPHYNSWREMKKKFVTHMLSANRTEQ-FRQVQTDEIFRMIEKISKL 162
Q L + G+ L + +WRE ++ V+ + + ++ Q T+E + +
Sbjct: 86 QILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANH 145
Query: 163 SAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ 222
S P P L + A++ N+I + G+RFE + + L +
Sbjct: 146 SGRPFR----------PNGLLDKAVS---NVIASLTCGRRFEYDDPRFLRLLDLAQEGLK 192
Query: 223 AMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHL--DPKRPKVAEQ 280
G FLR+ L V L + LR + ++ + L E + DP +P
Sbjct: 193 EESG--FLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPP---- 246
Query: 281 EDLIDVLLGEMKTA 294
DL + L EM+ A
Sbjct: 247 RDLTEAFLAEMEKA 260
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 46 QLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALSGT 105
+D N +CF +L +++G +FSL+L + P +V++ +EA H + RP + T
Sbjct: 26 HVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85
Query: 106 QKLSYN--FLGLTLTPHYNSWREMKKKFVTHMLSANRTEQ-FRQVQTDEIFRMIEKISKL 162
Q L + G+ L + +WRE ++ V+ + + ++ Q T+E + +
Sbjct: 86 QILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANH 145
Query: 163 SAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ 222
S P P L + A++ N+I + G+RFE + + L +
Sbjct: 146 SGRPFR----------PNGLLDKAVS---NVIASLTCGRRFEYDDPRFLRLLDLAQEGLK 192
Query: 223 AMVGRVFLRDCLPFVGC--WLDSLTGWNRRLRNNF-SDCDKVYQQLIEDH---LDPKRPK 276
G FLR+ L V + +L G R + F + D +L+ +H DP +P
Sbjct: 193 EESG--FLREVLNAVPVDRHIPALAGKVLRFQKAFLTQLD----ELLTEHRMTWDPAQPP 246
Query: 277 VAEQEDLIDVLLGEMKTA 294
DL + L EM+ A
Sbjct: 247 ----RDLTEAFLAEMEKA 260
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL Q+D L F +L ++YG +F++ LG RP +V+ +EA FS R +
Sbjct: 23 NLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKI 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKL 162
+ + + G+ + WR +++ + M ++ + + E R + + +L
Sbjct: 83 AVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL--VEEL 138
Query: 163 SAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ 222
A D+ + + ++ NII + FGKRF D RL +F ++
Sbjct: 139 RKSKGALLDNTL----------LFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSF 187
Query: 223 AMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 279
+++ + F G +L G +R++ N + + Q +E H LDP P+
Sbjct: 188 SLISSFSSQVFELFSG-FLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR--- 243
Query: 280 QEDLIDVLLGEMK 292
D IDV L M+
Sbjct: 244 --DFIDVYLLRME 254
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL Q+D L F +L ++YG +F++ LG RP +V+ +EA FS R +
Sbjct: 23 NLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKI 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKL 162
+ + + G+ + WR +++ + M ++ + + E R + + +L
Sbjct: 83 AVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL--VEEL 138
Query: 163 SAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ 222
A D+ + + ++ NII + FGKRF D RL +F ++
Sbjct: 139 RKSKGALLDNTL----------LFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSF 187
Query: 223 AMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 279
+++ + F G +L G +R++ N + + Q +E H LDP P+
Sbjct: 188 SLISSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR--- 243
Query: 280 QEDLIDVLLGEMK 292
D IDV L M+
Sbjct: 244 --DFIDVYLLRME 254
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL Q+D L F +L ++YG +F++ LG RP +V+ +EA FS R +
Sbjct: 23 NLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKI 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKL 162
+ + + G+ + WR +++ + M ++ + + E R + + +L
Sbjct: 83 AVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL--VEEL 138
Query: 163 SAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ 222
A D+ + + ++ NII + FGKRF D RL +F ++
Sbjct: 139 RKSKGALLDNTL----------LFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSF 187
Query: 223 AMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 279
+++ + F G +L G +R++ N + + Q +E H LDP P+
Sbjct: 188 SLISSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR--- 243
Query: 280 QEDLIDVLLGEMK 292
D IDV L M+
Sbjct: 244 --DFIDVYLLRME 254
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL Q+D L F +L ++YG +F++ LG RP +V+ +EA FS R +
Sbjct: 23 NLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKI 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKL 162
+ + + G+ + WR +++ + M ++ + + E R + + +L
Sbjct: 83 AVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL--VEEL 138
Query: 163 SAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ 222
A D+ + + ++ NII + FGKRF D RL +F ++
Sbjct: 139 RKSKGALLDNTL----------LFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSF 187
Query: 223 AMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 279
+++ + F G +L G +R++ N + + Q +E H LDP P+
Sbjct: 188 SLISSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR--- 243
Query: 280 QEDLIDVLLGEMK 292
D IDV L M+
Sbjct: 244 --DFIDVYLLRME 254
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL Q+D L F +L ++YG +F++ LG RP +V+ +EA FS R +
Sbjct: 23 NLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKI 82
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKL 162
+ + + G+ + WR +++ + M ++ + + E R + + +L
Sbjct: 83 AVVDPIFQGY-GVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCL--VEEL 138
Query: 163 SAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ 222
A D+ + + ++ NII + FGKRF D RL +F ++
Sbjct: 139 RKSKGALLDNTL----------LFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSF 187
Query: 223 AMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAE 279
+++ + F G +L G +R++ N + + Q +E H LDP P+
Sbjct: 188 SLISSFSSQVFELFSG-FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR--- 243
Query: 280 QEDLIDVLLGEMK 292
D IDV L M+
Sbjct: 244 --DFIDVYLLRME 254
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 31/253 (12%)
Query: 56 FWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPA------LSGTQKLS 109
F +L+++YG +F +RLG P +V++ + +A F+ RP+ +SG + ++
Sbjct: 34 FARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMA 93
Query: 110 YNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAPPAAA 169
+ HY+ +++++ M+ T Q R Q E + E ++ +
Sbjct: 94 FG--------HYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGS 145
Query: 170 ADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVF 229
AD P+ + +A N++ V FG R+ + L S E VG
Sbjct: 146 ADGAFLDPRPLTVVAVA-----NVMSAVCFGCRYSHD-DPEFRELLSHNEEFGRTVGAGS 199
Query: 230 LRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIED----HLDPKRPKVAEQEDLID 285
L D +P WL R + F ++ + I D H + RP A + D++D
Sbjct: 200 LVDVMP----WLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-DMMD 254
Query: 286 --VLLGEMKTADD 296
+L E K A D
Sbjct: 255 AFILSAEKKAAGD 267
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 56 FWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALSGTQKLSYNFLGL 115
F+KL K+YGPI+S+R+G + T+++ +LAKE FS RP ++ S N G+
Sbjct: 35 FFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGI 94
Query: 116 TLTPHYNSWR 125
W+
Sbjct: 95 AFADSGAHWQ 104
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 21/241 (8%)
Query: 58 KLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALSGTQKLSYNFLGLTL 117
K S+ YG IFSL LG T+V++ + KE F+ RP L K++ GL
Sbjct: 42 KQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT-KMGGLLN 100
Query: 118 TPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAPPAAAADDYVSSE 177
+ + W + ++ L+ N F Q +++E+ + A + Y
Sbjct: 101 SRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEETKFFN----DAIETYKGR- 149
Query: 178 GPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ--AMVGRVFLRDCLP 235
P + ++ + NI + FG+RF E T + +F+E A VFL + P
Sbjct: 150 -PFDFKQLITNAVSNITNLIIFGERFTYEDT-DFQHMIELFSENVELAASASVFLYNAFP 207
Query: 236 FVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLGEMKTAD 295
++G G +++L N + +LIE ++P++ + +D L EM
Sbjct: 208 WIGIL---PFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGK 262
Query: 296 D 296
+
Sbjct: 263 N 263
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 23/247 (9%)
Query: 58 KLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALSGTQKLSYNFLGLTL 117
K S+ YG IFSL LG T+V++ + KE F+ RP L K++ GL
Sbjct: 42 KQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT-KMGGLLN 100
Query: 118 TPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAPPAAAADDYVSSE 177
+ + W + ++ L+ N F Q +++E+ + A + Y
Sbjct: 101 SRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEETKFFN----DAIETYKGR- 149
Query: 178 GPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ--AMVGRVFLRDCLP 235
P + ++ + NI + FG+RF E T + +F+E A VFL + P
Sbjct: 150 -PFDFKQLITNAVSNITNLIIFGERFTYEDT-DFQHMIELFSENVELAASASVFLYNAFP 207
Query: 236 FVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLGEMKTA- 294
++G G +++L N + +LIE ++P++ + +D L EM
Sbjct: 208 WIGIL---PFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGK 262
Query: 295 -DDHQTF 300
D TF
Sbjct: 263 NDPSSTF 269
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 30/272 (11%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
N+ Q+ +++ LSK YGP+F+L G +P +V+ + KEA +FS R
Sbjct: 24 NILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIF 83
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFR-MIEKISK 161
++ + F G+ + + W+E+++ + + + ++ + + E R ++E++ K
Sbjct: 84 PLAERANRGF-GIVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRK 141
Query: 162 LSAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAET 221
A P ++ P N+I + F KRF D L E
Sbjct: 142 TKASPCDPT--FILGCAPC-----------NVICSIIFHKRF-DYKDQQFLNLMEKLNEN 187
Query: 222 QAMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVA 278
++ +++ C F +D G + +L N + + +++H +D P
Sbjct: 188 IKILSSPWIQICNNF-SPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNP--- 243
Query: 279 EQEDLIDVLLGEMKTADDHQ----TFDSIKST 306
+D ID L +M+ +Q T +S+++T
Sbjct: 244 --QDFIDCFLMKMEKEKHNQPSEFTIESLENT 273
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 26/260 (10%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
N+ Q+D +++ LSK YGP+F+L G +V+ ++ KEA +FS R
Sbjct: 24 NILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHF 83
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFR-MIEKISK 161
++ + F G+ + + W+E+++ + + + ++ + + E R ++E++ K
Sbjct: 84 PLAERANRGF-GIVFS-NGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRK 141
Query: 162 LSAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAET 221
A P ++ P N +I +IIF+ KRF D L E
Sbjct: 142 TKASPCDPT--FILGCAPCN-------VICSIIFQ----KRF-DYKDQQFLNLMEKLNEN 187
Query: 222 QAMVGRVFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVA 278
+V +++ C F +D G + +L N + + + +++H +D P+
Sbjct: 188 IRIVSTPWIQICNNF-PTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMDINNPR-- 244
Query: 279 EQEDLIDVLLGEMKTADDHQ 298
D ID L +M+ +Q
Sbjct: 245 ---DFIDCFLIKMEKEKQNQ 261
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 118/273 (43%), Gaps = 32/273 (11%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
N+ Q+ +++ LSK YGP+F+L G +P +V+ + KEA +FS R
Sbjct: 22 NILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIF 81
Query: 103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFR-MIEKISK 161
++ + F G+ + + W+E+++ + + + ++ + + E R ++E++ K
Sbjct: 82 PLAERANRGF-GIVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRK 139
Query: 162 LSAPPAAAADDYVSSEGPINLSEMAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAET 221
A P ++ P N+I + F KRF+ + ++ + +
Sbjct: 140 TKASPCDPT--FILGCAPC-----------NVICSIIFHKRFDYKDQQFLNLMEKLNENI 186
Query: 222 QAMVGR-VFLRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKV 277
+ + + + + P LD G + +L N + + +++H +D P
Sbjct: 187 EILSSPWIQVYNNFP---ALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNP-- 241
Query: 278 AEQEDLIDVLLGEMKTADDHQ----TFDSIKST 306
+D ID L +M+ +Q T +S+++T
Sbjct: 242 ---QDFIDCFLMKMEKEKHNQPSEFTIESLENT 271
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 44 LHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALS 103
LH L NL L+++ GP++ LRLG + +V++S + +EA + F+ RP +
Sbjct: 38 LHLLQP-NLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP 96
Query: 104 GTQKLSYNFLGLTLTPHYNSWREMKKKFVTHMLSANRT 141
+ +S ++L + W+ KK + +L R+
Sbjct: 97 SYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRS 134
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 3/147 (2%)
Query: 58 KLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALSGTQKLSYNFLGLTL 117
++S+QYG + +R+G P +V+S ++A F RP L T L N ++
Sbjct: 38 RMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLY-TFTLISNGQSMSF 96
Query: 118 TPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAPPAAAADDYVSSE 177
+P +++ + L + T E +SK + + + ++
Sbjct: 97 SPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLE--EHVSKEAEVLISTLQELMAGP 154
Query: 178 GPINLSEMAMTLIRNIIFRVGFGKRFE 204
G N + + N+I + FG+R++
Sbjct: 155 GHFNPYRYVVVSVTNVICAICFGRRYD 181
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSR 99
N QL+ + K+S++YGP+F++ LG R +V+ KEA +FS R
Sbjct: 23 NYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGR 79
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6
L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6
L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6
L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6
L240cN297Q
Length = 476
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSR 99
N QL+ + K+S++YGP+F++ LG R +V+ +EA +FS R
Sbjct: 23 NYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6
N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6
N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6
N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6
N297qI300V
Length = 476
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSR 99
N QL+ + K+S++YGP+F++ LG R +V+ +EA +FS R
Sbjct: 23 NYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSR 99
N QL+ + K+S++YGP+F++ LG R +V+ +EA +FS R
Sbjct: 23 NYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSR 99
N QL+ + K+S++YGP+F++ LG R +V+ +EA +FS R
Sbjct: 23 NYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN
COMPLEX WITH Pilocarpine
Length = 476
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSR 99
N QL+ + K+S++YGP+F++ LG R +V+ +EA +FS R
Sbjct: 23 NYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR 79
>pdb|2OJL|A Chain A, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68.
pdb|2OJL|B Chain B, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68
Length = 108
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 247 WNRRLRNNFSDCDKVYQQLIEDHLDPKRP 275
W+R + F + KV +Q + DHLDP RP
Sbjct: 63 WDREVDGGFPEA-KVLKQRVRDHLDPGRP 90
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 7/169 (4%)
Query: 58 KLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPALSGTQKLSYNFLGLTL 117
++S++YG + +R+G P +V+S ++A F RP L T L + LT
Sbjct: 43 RMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY-TSTLITDGQSLTF 101
Query: 118 TPHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAPPAAAADDYVSSE 177
+ +++ + L N + + E +SK + + + ++
Sbjct: 102 STDSGPVWAARRRLAQNAL--NTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGP 159
Query: 178 GPINLSEMAMTLIRNIIFRVGFGKRF---EDEGTAAVSRLHSVFAETQA 223
G + + + N+I + FG+ F DE + V H F ET +
Sbjct: 160 GHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHE-FVETAS 207
>pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase
Suggests A Novel Mechanism For Low Ph Activation
Length = 84
Score = 31.6 bits (70), Expect = 0.57, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 96 FSSRPALSGTQKLSYNFL 113
FSSRPAL ++LSYNFL
Sbjct: 46 FSSRPALKRYERLSYNFL 63
>pdb|3CTZ|A Chain A, Structure Of Human Cytosolic X-Prolyl Aminopeptidase
Length = 623
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 125 REMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAPPAAAADDYVSSEGPINLSE 184
+E+ K VT + +A++ E+FR+ Q D + IS S P A Y + E
Sbjct: 350 KEVPKGGVTEISAADKAEEFRRQQADFVDLSFPTIS--STGPTGAIIHYAP------VPE 401
Query: 185 MAMTLIRNIIFRVGFGKRFEDEGTAAVSR 213
TL + ++ + G +++D GT V+R
Sbjct: 402 TNRTLSLDEVYLIDSGAQYKD-GTTDVTR 429
>pdb|1YDM|A Chain A, X-ray Structure Of Northeast Structural Genomics Target
Sr44
pdb|1YDM|B Chain B, X-ray Structure Of Northeast Structural Genomics Target
Sr44
pdb|1YDM|C Chain C, X-ray Structure Of Northeast Structural Genomics Target
Sr44
Length = 187
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 122 NSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAPPAAAADDYVSSEGPIN 181
+W E K+ + + QFR QTD+ +L A + + +N
Sbjct: 62 QAWEEGKQVCIPKCHPDTKKXQFRTYQTDD---------QLETVYAGLLEPVIEKTKEVN 112
Query: 182 LSEMAMTLIRNII-----FRVGFGKRFED 205
S++ + ++ + FRVGFG + D
Sbjct: 113 PSQIDLXIVPGVCFDVNGFRVGFGGGYYD 141
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 43 NLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKIHDLQFSSRPAL 102
NL L+ K++ + G IF R T ISS +L KEA + +F L
Sbjct: 17 NLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKEA--CDESRFDKN--L 72
Query: 103 SGTQKLSYNFLGLTLT---PHYNSWREMKKKFVTHMLSANRTEQFRQVQTDEIFRMIEKI 159
S +K +F G L H +W++ + + LS + + + D ++++K
Sbjct: 73 SQARKFVRDFAGDGLATSWTHEKNWKKARNILLPR-LSQQAMKGYHAMMVDIAVQLVQKW 131
Query: 160 SKLSA 164
+L++
Sbjct: 132 ERLNS 136
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,342,188
Number of Sequences: 62578
Number of extensions: 266572
Number of successful extensions: 650
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 615
Number of HSP's gapped (non-prelim): 35
length of query: 308
length of database: 14,973,337
effective HSP length: 99
effective length of query: 209
effective length of database: 8,778,115
effective search space: 1834626035
effective search space used: 1834626035
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)