BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044278
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
Query: 11 SLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSG-------NSQDFIKIHNIYETLSDPT 63
SLY+VL V T +IK+ YR LA++ HPD++G ++ +F+KIH Y TLSDP
Sbjct: 65 SLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPE 124
Query: 64 TRAVYDMSLVSRRRTRTASFGCLGRSGFHPTRRWE 98
R+VYD ++ RR+R + G G G + R WE
Sbjct: 125 KRSVYDRRML--RRSRPLTVGTSGL-GSYVGRNWE 156
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 11 SLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD-FIKIHNIYETLSDPTTRAVYD 69
+LY++L + T+ EIKT Y+ LAK YHPD++ D F+KI+N Y LSD T +A YD
Sbjct: 2 TLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYD 61
Query: 70 MSL 72
L
Sbjct: 62 AML 64
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD+ +G + F +I YE LSDP RA
Sbjct: 4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD+ +G + F +I YE LSDP RA
Sbjct: 4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2
SV=1
Length = 412
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAQGTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD-FIKIHNIYETLSDP 62
MA LY++L V P + +E+K YR LAK YHPD + N+ D F +I YE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 TTRAVYD 69
R +YD
Sbjct: 61 EKRELYD 67
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL + + EIK YR L+K YHPD+ +G + F +I YE LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL + + EIK YR L+K YHPD+ +G + F +I YE LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL + + EIK YR L+K YHPD+ +G + F +I YE LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL + + EIK YR L+K YHPD+ +G + F +I YE LSDP RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 SLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSG-NSQDFIKIHNIYETLSDPTTRAVYD 69
+LY++L + +I EIK Y+ LAK YHPD++ SQ F++I+N Y LSDP + YD
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYD 61
Query: 70 MSL 72
L
Sbjct: 62 SML 64
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGN----SQDFIKIHNIYETLSDPTTR 65
+ LYE+L V+ + EIK YR LAK YHPDL+ Q F +I+ YE LSDP R
Sbjct: 4 KDLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKR 63
Query: 66 AVYD 69
A YD
Sbjct: 64 AQYD 67
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAQGTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD-FIKIHNIYETLSDP 62
MA LY++L V P + +E+K YR LAK YHPD + N+ D F +I YE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 TTRAVYD 69
R +YD
Sbjct: 61 EKRELYD 67
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAQGTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD-FIKIHNIYETLSDP 62
MA LY++L V P + +E+K YR LAK YHPD + N+ D F +I YE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 TTRAVYD 69
R +YD
Sbjct: 61 EKRELYD 67
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 MAQGTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD-FIKIHNIYETLSDP 62
MA LY++L V P + +E+K YR LAK YHPD + N+ D F +I YE LS+P
Sbjct: 1 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNP 60
Query: 63 TTRAVYD 69
R +YD
Sbjct: 61 EKRELYD 67
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 4 MAQGTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGN------SQDFIKIHNIYE 57
+ Q S Y++L V T+ EIK Y+ LA+ YHPD+S + FI++ YE
Sbjct: 59 VKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYE 118
Query: 58 TLSDPTTRAVYDMSL 72
TLSDP R +YD L
Sbjct: 119 TLSDPRRRVLYDRDL 133
>sp|B0S1F7|DNAJ_FINM2 Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL-SGNSQ---DFIKIHNIYETLSDPTTR 65
++LYE+L V T EIK +YR LAK YHPD+ SG+S+ F +I+ YE L D R
Sbjct: 2 KNLYEILEVNENATQEEIKKSYRRLAKKYHPDINSGDSEAENKFKEINGAYEVLGDKEKR 61
Query: 66 AVYDM 70
YDM
Sbjct: 62 KKYDM 66
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 9 GRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTR 65
R YE+L V E+K YR LA+ YHPD++ G + F +I+ YE LSDP R
Sbjct: 2 ARDFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQAR 61
Query: 66 AVYDMSLVSRRRTRTASFGCLGRSGF 91
A YD R A +G +GF
Sbjct: 62 ANYD-------RFGEAGVSGVGAAGF 80
>sp|Q92T07|DNAJ_RHIME Chaperone protein DnaJ OS=Rhizobium meliloti (strain 1021)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD----FIKIHNIYETLSDPTTR 65
R LYE L V+ E+K+ +R LA YHPD + Q+ F +I+ YETL DP R
Sbjct: 3 RDLYETLGVQKNADEKELKSAFRKLAMKYHPDRNPGDQESEKSFKEINEAYETLKDPQKR 62
Query: 66 AVYD 69
A YD
Sbjct: 63 AAYD 66
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD+ +G+ + F ++ YETLSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 HYD 66
>sp|Q87VN8|CBPA_PSESM Curved DNA-binding protein OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=cbpA PE=3 SV=1
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRA 66
+ Y++L VEP IKT YR LA+ YHPD+S G F + YE LS P RA
Sbjct: 4 KDYYKILDVEPAADDKAIKTAYRKLARKYHPDVSKEAGAEDKFKEASEAYEVLSSPEKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 EYD 66
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQ----DFIKIHNIYETLSDPTTR 65
R YE+L V+ + +EIK YR LAK YHPD++ + F +I+ YE LSDP R
Sbjct: 5 RDYYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKR 64
Query: 66 AVYD 69
A YD
Sbjct: 65 ARYD 68
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5)
GN=dnaJ2 PE=3 SV=1
Length = 376
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 4 MAQGTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGN---SQDFIKIHNIYETLS 60
MA T + YE+L V + EIK YR L + YHPD+ + F +I+ Y+ LS
Sbjct: 1 MASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLS 60
Query: 61 DPTTRAVYDM 70
DP R +YDM
Sbjct: 61 DPEKRKLYDM 70
>sp|C3MC05|DNAJ_RHISN Chaperone protein DnaJ OS=Rhizobium sp. (strain NGR234) GN=dnaJ
PE=3 SV=1
Length = 379
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD----FIKIHNIYETLSDPTTR 65
R LYE L V+ E+K+ +R LA YHPD + Q+ F +I+ YETL DP R
Sbjct: 3 RDLYETLGVKKNADEKELKSAFRKLAMKYHPDRNPGDQEAEKSFKEINEAYETLKDPQKR 62
Query: 66 AVYD 69
A YD
Sbjct: 63 AAYD 66
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGN----SQDFIKIHNIYETLSDPTTR 65
R YE+L V T EIK YR LA+ YHPD++ + ++ F +I+ YE LSDP R
Sbjct: 3 RDYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKR 62
Query: 66 AVYD 69
A YD
Sbjct: 63 ARYD 66
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ
PE=2 SV=1
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRA 66
R YE+L V T +EIK YR LAK YHPD++ G F ++ YE LSD RA
Sbjct: 5 RDFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRA 64
Query: 67 VYD 69
YD
Sbjct: 65 NYD 67
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 8 TGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNS---QDFIKIHNIYETLSDPTT 64
T + YE+L V T EIK YR L + YHPDL+ + + F +I+ YE LSDP
Sbjct: 3 TKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQK 62
Query: 65 RAVYD 69
RA YD
Sbjct: 63 RAQYD 67
>sp|B2GBQ6|DNAJ_LACF3 Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC
3956 / LMG 18251) GN=dnaJ PE=3 SV=1
Length = 386
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 12 LYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRAVY 68
LY+VL V+ + +EIK YR LA YHPD++ G + F KI+ YETLSD RA Y
Sbjct: 6 LYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQY 65
Query: 69 D 69
D
Sbjct: 66 D 66
>sp|Q8YUA5|DNAJ_NOSS1 Chaperone protein DnaJ OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=dnaJ PE=3 SV=1
Length = 376
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRA 66
R YE+L V EIK YR LA+ YHPD++ G + F +I+ YE LS+P TRA
Sbjct: 3 RDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRA 62
Query: 67 VYD 69
YD
Sbjct: 63 RYD 65
>sp|A8FFD1|DNAJ_BACP2 Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD+ +G+ + F ++ YETLSD R+
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRS 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain
FZB42) GN=dnaJ PE=3 SV=1
Length = 375
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD+ SG + F ++ YE LSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|Q65H55|DNAJ_BACLD Chaperone protein DnaJ OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=dnaJ PE=3 SV=1
Length = 375
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD+ +G ++ F ++ YETLSD RA
Sbjct: 4 RDYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 HYD 66
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQ---DFIKIHNIYETLSDPTTRA 66
R YEVL V+ ++ E+K YR LA+ YHPD++ F ++ Y+TLSDP +A
Sbjct: 4 RDYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKA 63
Query: 67 VYD 69
YD
Sbjct: 64 RYD 66
>sp|B2J3J3|DNAJ_NOSP7 Chaperone protein DnaJ OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=dnaJ PE=3 SV=1
Length = 375
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 9 GRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTR 65
R YE+L V T E+K YR LA+ YHPD++ G F +I+ YE LS+P TR
Sbjct: 2 ARDYYEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETR 61
Query: 66 AVYD 69
A YD
Sbjct: 62 ARYD 65
>sp|P25303|SCJ1_YEAST DnaJ-related protein SCJ1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCJ1 PE=1 SV=2
Length = 377
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 13 YEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNS----QDFIKIHNIYETLSDPTTRAVY 68
Y +L ++ T EIK+ YR L+K YHPD + S Q FI++ Y+ LSDP + +Y
Sbjct: 25 YAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIEVGEAYDVLSDPEKKKIY 84
Query: 69 D 69
D
Sbjct: 85 D 85
>sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1
Length = 376
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDL---SGNSQDFIKIHNIYETLSDPTTRA 66
R YEVL + + EIK YR L+K YHPD+ +G + F +I YE LSD RA
Sbjct: 4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|Q88VM1|DNAJ_LACPL Chaperone protein DnaJ OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRA 66
+ LY+VL VE + EIK YR L+K YHPDL+ G + F ++ YETL D RA
Sbjct: 4 QDLYKVLGVEKDASQDEIKKAYRKLSKKYHPDLNHEPGAEEKFKAVNEAYETLGDAQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|A6UEY1|DNAJ_SINMW Chaperone protein DnaJ OS=Sinorhizobium medicae (strain WSM419)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS-GNSQ---DFIKIHNIYETLSDPTTR 65
R LYE L V+ E+K+ +R LA YHPD + G+++ F +I+ YETL DP R
Sbjct: 3 RDLYETLGVQKSADEKELKSAFRKLAMKYHPDRNPGDNEAEKSFKEINEAYETLKDPQKR 62
Query: 66 AVYD 69
A YD
Sbjct: 63 AAYD 66
>sp|Q3MG81|DNAJ_ANAVT Chaperone protein DnaJ OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=dnaJ PE=3 SV=1
Length = 376
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 9 GRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTR 65
R YE+L V EIK YR LA+ YHPD++ G + F +I+ YE LS+P TR
Sbjct: 2 ARDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETR 61
Query: 66 AVYD 69
A YD
Sbjct: 62 ARYD 65
>sp|Q835R5|DNAJ_ENTFA Chaperone protein DnaJ OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=dnaJ PE=3 SV=1
Length = 389
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 7 GTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNS---QDFIKIHNIYETLSDPT 63
T R YEVL + + EIK YR L+K YHPD++ + + F ++ YE LSDP
Sbjct: 2 ATKRDYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEADAEEKFKEVSEAYEVLSDPQ 61
Query: 64 TRAVYD 69
+A YD
Sbjct: 62 KKAAYD 67
>sp|Q892R1|DNAJ_CLOTE Chaperone protein DnaJ OS=Clostridium tetani (strain
Massachusetts / E88) GN=dnaJ PE=3 SV=1
Length = 375
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD----FIKIHNIYETLSDPTTR 65
+ YEVL VE +EIK +R LA YHPD + +++ F +I+ Y+ LSDP R
Sbjct: 4 KDFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKR 63
Query: 66 AVYDMSLVSRRRTRTASF--GCLGRSGF 91
A YD + TA F G G SGF
Sbjct: 64 AQYD-------QFGTADFNGGGAGFSGF 84
>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 13 YEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRAVYD 69
YE+L V EIK YR LA+ YHPD++ G + F +I+ YE LS+P TRA YD
Sbjct: 6 YEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRARYD 65
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD++ G + F +I YE LSD RA
Sbjct: 4 RDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 NYD 66
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 13 YEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNS-QDFIKIHNIYETLSDPTTRAVYD 69
Y++L V+P + EIK YR LA YHPD + + + F I YE LSDP R VYD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYD 65
>sp|P73097|DNAJ2_SYNY3 Chaperone protein DnaJ 2 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=dnaJ2 PE=3 SV=1
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNS----QDFIKIHNIYETLSDPTTR 65
R+ Y++L V T EIK ++R LA+ YHPD++ N + F I+ Y+ LSD T R
Sbjct: 5 RNYYQILGVPRNATAEEIKKSFRKLARQYHPDVNPNDKTAEEKFKDINEAYDVLSDETKR 64
Query: 66 AVYDMSLVSR-RRTRTASFGCLGRSGFHPT 94
D L R RR T+ F G P
Sbjct: 65 RELDSRLFGRFRRPPTSRFSPNSNGGRSPN 94
>sp|Q49Y21|DNAJ_STAS1 Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR L+K YHPD++ G + F +I YE LSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 NYD 66
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNS---QDFIKIHNIYETLSDPTTRA 66
R YEVL V + EIK YR LAK YHPD+S + F ++ YE LSD RA
Sbjct: 4 RDYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQEAYEVLSDEQKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 QYD 66
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 7 GTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNSQD----FIKIHNIYETLSDP 62
T + YE+L V EIK YR LA+ YHPD++ + D F +I YE LSDP
Sbjct: 2 ATSKDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDP 61
Query: 63 TTRAVYD 69
RA YD
Sbjct: 62 DKRARYD 68
>sp|Q93R26|DNAJ_TETHA Chaperone protein DnaJ OS=Tetragenococcus halophilus GN=dnaJ PE=3
SV=1
Length = 386
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 7 GTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLSGNS---QDFIKIHNIYETLSDPT 63
T R YEVL V+ + EIK YR L+K YHPD++ + + F K TLSDP
Sbjct: 2 ATKRDYYEVLGVDKGASDDEIKKAYRKLSKKYHPDVNQEADAEEKFKKFQKPMNTLSDPQ 61
Query: 64 TRAVYD 69
RA YD
Sbjct: 62 KRAAYD 67
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 4 MAQGTGRSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS-GN---SQDFIKIHNIYETL 59
MAQ + YE+L V T EIK YR LAK YHPD + GN + F +I+ YE L
Sbjct: 1 MAQK--KDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVL 58
Query: 60 SDPTTRAVYD 69
SDP R +YD
Sbjct: 59 SDPEKRKLYD 68
>sp|Q6GGC1|DNAJ_STAAR Chaperone protein DnaJ OS=Staphylococcus aureus (strain MRSA252)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 10 RSLYEVLRVEPMTTISEIKTTYRSLAKVYHPDLS---GNSQDFIKIHNIYETLSDPTTRA 66
R YEVL + + EIK YR L+K YHPD++ G + F +I YE LSD RA
Sbjct: 4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRA 63
Query: 67 VYD 69
YD
Sbjct: 64 SYD 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,923,081
Number of Sequences: 539616
Number of extensions: 1269459
Number of successful extensions: 4760
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 3128
Number of HSP's gapped (non-prelim): 1034
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)