Query 044280
Match_columns 268
No_of_seqs 145 out of 1073
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 23:02:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044280hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hcz_X Beta-expansin 1A; domai 100.0 3.2E-66 1.1E-70 463.4 23.7 237 25-266 4-244 (245)
2 1n10_A PHL P I, pollen allerge 100.0 2.1E-65 7.1E-70 457.0 26.2 233 26-263 5-241 (241)
3 3d30_A YOAJ, expansin like pro 100.0 6.3E-54 2.1E-58 375.9 25.2 199 36-268 2-208 (208)
4 3ft1_A PHL P 3 allergen; beta- 100.0 1.7E-28 5.7E-33 191.1 13.3 97 168-266 2-99 (100)
5 1wc2_A Endoglucanase; hydrolas 99.9 1.2E-27 4E-32 202.1 7.8 117 38-167 12-161 (181)
6 2jnz_A PHL P 3 allergen; timot 99.9 3.2E-26 1.1E-30 180.1 13.7 97 166-264 11-108 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 2.5E-26 8.4E-31 177.7 -0.6 93 169-264 3-96 (96)
8 1bw3_A Barwin, basic barley SE 99.6 1.2E-16 4.2E-21 128.2 4.6 74 77-164 49-124 (125)
9 4avr_A PA4485; unknown functio 99.2 2E-10 7E-15 87.9 11.2 94 41-162 2-95 (95)
10 2kqa_A Cerato-platanin; elicit 98.2 4.1E-06 1.4E-10 67.1 8.4 68 75-162 51-120 (129)
11 3m3g_A EPL1 protein; fungal, p 98.2 3.6E-06 1.2E-10 66.9 7.2 69 75-162 45-114 (120)
12 3sul_A Cerato-platanin-like pr 98.1 5.1E-06 1.8E-10 66.1 7.0 70 76-162 46-116 (122)
13 3suj_A Cerato-platanin 1; doub 98.1 3.4E-06 1.2E-10 67.6 5.9 65 86-163 56-120 (127)
14 3sum_A Cerato-platanin-like pr 98.1 8.8E-06 3E-10 65.6 7.6 73 75-163 49-122 (136)
15 3suk_A Cerato-platanin-like pr 98.1 3.8E-06 1.3E-10 67.2 5.4 73 75-162 46-119 (125)
16 2eng_A Endoglucanase V; cellul 95.4 0.0069 2.4E-07 52.0 2.6 52 76-132 72-123 (210)
17 3nrl_A Uncharacterized protein 44.0 21 0.00072 25.9 3.4 18 82-99 25-42 (81)
18 2jn4_A Hypothetical protein FI 39.6 17 0.0006 26.7 2.4 47 183-235 33-84 (87)
19 2a9d_A Sulfite oxidase; molybd 35.0 49 0.0017 30.5 5.3 24 190-213 279-302 (372)
20 1sox_A Sulfite oxidase; oxidor 30.3 64 0.0022 30.6 5.4 24 190-213 373-396 (466)
21 1ogp_A Sulfite oxidase; oxidor 28.4 90 0.0031 28.9 6.0 24 190-213 292-315 (393)
22 3pe9_A Fibronectin(III)-like m 27.7 1E+02 0.0035 22.7 5.1 46 194-242 30-75 (98)
23 2blf_A SORA, sulfite\:cytochro 26.4 49 0.0017 30.5 3.7 51 191-242 289-347 (373)
24 2d7n_A Filamin-C; beta-sandwic 21.8 2.3E+02 0.0078 20.4 6.0 67 154-237 9-82 (93)
25 2kct_A Cytochrome C-type bioge 20.3 85 0.0029 23.2 3.3 31 230-260 30-63 (94)
No 1
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=3.2e-66 Score=463.42 Aligned_cols=237 Identities=41% Similarity=0.825 Sum_probs=217.2
Q ss_pred ccCCccccccCCCCCeeeEEEEEcCCCCCCCC--CcCCCCCCcCCCCCCCCCeEEEcChhhcCCCCCCCceEEEEeCCCC
Q 044280 25 VVAPTQLNHQLSEPHWLPATATWYGSPEGDGS--DGGACGYGSLVDVKPLRARVGAVSPVLFKNGGGCGACYKVRCLDKS 102 (268)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~g~aT~Yg~~~g~g~--~~GaCGyg~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~ 102 (268)
.+.|+..+...+.++|+.|+||||+.+++.|+ .+|||||+ +....|++.++||+|..+|++|+.||+||||+|.+++
T Consensus 4 ~~~~~~~~~~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg-~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~ 82 (245)
T 2hcz_X 4 KVPPGPNITTNYNGKWLTARATWYGQPNGAGAPDNGGACGIK-NVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKP 82 (245)
T ss_dssp CCCCCCCCCSCCCCCCEEEEEEECSCTTSCSSTTSCCTTCCC-CTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSS
T ss_pred CCCCCCCCCcccCCceeeeEEEEeCCCCCCCcCCCCccCCCC-CCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCC
Confidence 45666666666788999999999999987776 68999994 6667788999999999999999999999999999888
Q ss_pred CccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCeecEEEEEEeeCCCC-cceEEEEccCCCCc
Q 044280 103 ICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGELPVIYRRAPCKYPG-KNIAFHVNEGSTDY 181 (268)
Q Consensus 103 ~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~~~I~w~~V~C~~~g-~ni~~~vk~Gss~~ 181 (268)
.|++++|+|+|||+|+ |..++.|||||+.||.+||.+++++++++.|+++|+||+|+|+++| .||+|++++||++|
T Consensus 83 ~C~~~sv~V~VtD~C~---C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~ 159 (245)
T 2hcz_X 83 ECSGNPVTVYITDMNY---EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPN 159 (245)
T ss_dssp SBCSSCEEEEEEEECC---CTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSS
T ss_pred ccCCCCEEEEEEeccC---CCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcc
Confidence 8999999999999998 7556799999999999999988888888999999999999999983 48999999999999
Q ss_pred eEEEEEEeeCCCCCeeEEEEEecCCCCeEEccccCCceEEEcCC-CCCcceEEEEEECcCCeEEEEccccCCCCCCCeEE
Q 044280 182 WLSLLVEFEDGDGDVGSMHIREASSSEWLQMNHVWGANWSIIGG-PLKGPFSVKLATLSTGRTLSARAVIPSNWSPKATY 260 (268)
Q Consensus 182 w~ai~v~n~~g~~~I~sVei~~~g~~~w~~m~r~~gn~W~~~~~-~~~~p~~lRiTs~~~G~~v~~~~vip~~~~~g~~y 260 (268)
|++|+|.|++|.++|++|||+++++..|++|+|+|||+|+++.. ++++||+||||+ .+||+|+++||||++|++|++|
T Consensus 160 ~~avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~gpls~RvT~-~~G~~v~~~nViP~~w~~g~ty 238 (245)
T 2hcz_X 160 YLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTS-ESGKKVIAKDVIPANWRPDAVY 238 (245)
T ss_dssp CCCEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCSSCCEEEEE-TTSCEEEESCSCCSSCCTTCEE
T ss_pred eEEEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCCCEEEEEEE-eCCcEEEEeeeecCCCCCCCEE
Confidence 99999999999999999999998777999999999999999644 367899999999 9999999999999999999999
Q ss_pred ecCCCC
Q 044280 261 TSRLNF 266 (268)
Q Consensus 261 ~t~~QF 266 (268)
++.+||
T Consensus 239 ~~~~qf 244 (245)
T 2hcz_X 239 TSNVQF 244 (245)
T ss_dssp ECSCCC
T ss_pred eCcccc
Confidence 999999
No 2
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=2.1e-65 Score=456.98 Aligned_cols=233 Identities=40% Similarity=0.842 Sum_probs=206.1
Q ss_pred cCCccccccCCCCCeeeEEEEEcCCCCCCCC--CcCCCCCCcCCCCCCCCCeEEEcChhhcCCCCCCCceEEEEeCCCCC
Q 044280 26 VAPTQLNHQLSEPHWLPATATWYGSPEGDGS--DGGACGYGSLVDVKPLRARVGAVSPVLFKNGGGCGACYKVRCLDKSI 103 (268)
Q Consensus 26 ~~~~~~~~~~~~~~~~~g~aT~Yg~~~g~g~--~~GaCGyg~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~ 103 (268)
.+|+...+..++++|+.|+||||+.+++.|+ .+|||||+ +....|++.++||+|..+|++|+.||+||||+|.+++.
T Consensus 5 ~~~~p~~~~~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg-~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~ 83 (241)
T 1n10_A 5 VPPGPNITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYK-DVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEA 83 (241)
T ss_dssp SCCCSCCCCBCCCSCEEEEEEEEC----------CCTTCCC-CTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTT
T ss_pred CCCCCCcCCcccCCceeeEEEEeCCCCCCCcCCCCeeCCCC-CcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCc
Confidence 3455555666788999999999999887766 78999994 66677899999999999999999999999999998888
Q ss_pred ccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCeecEEEEEEeeCCCC-cceEEEEccCCCCce
Q 044280 104 CSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGELPVIYRRAPCKYPG-KNIAFHVNEGSTDYW 182 (268)
Q Consensus 104 C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~~~I~w~~V~C~~~g-~ni~~~vk~Gss~~w 182 (268)
|++++|+|+|||+|+ |++++.|||||++||.+||.++++++|++.|+++|+||+|+|+++| .||+|+|++||++||
T Consensus 84 C~~~~v~V~VtD~C~---C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~ 160 (241)
T 1n10_A 84 CSGEPVVVHITDDNE---EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNY 160 (241)
T ss_dssp BCSCCEEEEEEEECS---SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTE
T ss_pred cCCCCEEEEEeEecC---CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcce
Confidence 999999999999995 8766799999999999999988888888999999999999999984 589999999999999
Q ss_pred EEEEEEeeCCCCCeeEEEEEecCCCCeEEccccCCceEEEcCC-CCCcceEEEEEECcCCeEEEEccccCCCCCCCeEEe
Q 044280 183 LSLLVEFEDGDGDVGSMHIREASSSEWLQMNHVWGANWSIIGG-PLKGPFSVKLATLSTGRTLSARAVIPSNWSPKATYT 261 (268)
Q Consensus 183 ~ai~v~n~~g~~~I~sVei~~~g~~~w~~m~r~~gn~W~~~~~-~~~~p~~lRiTs~~~G~~v~~~~vip~~~~~g~~y~ 261 (268)
++|+|+|++|.++|++|||++++++.|++|+|+|||+|+++.. ++++||+||||+ .+||+|+++||||++|++|++|+
T Consensus 161 ~~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~gpls~RvT~-~~G~~v~~~nViP~~w~~g~ty~ 239 (241)
T 1n10_A 161 LALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTT-EGGTKTEAEDVIPEGWKADTSYE 239 (241)
T ss_dssp EEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEEEE-SSSCEEEEEEEECSSCCSSEEEE
T ss_pred EEEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCCCEEEEEEE-eCCcEEEEccccCCCCCCCCEEe
Confidence 9999999998899999999998778999999999999999643 467899999999 99999999999999999999999
Q ss_pred cC
Q 044280 262 SR 263 (268)
Q Consensus 262 t~ 263 (268)
+.
T Consensus 240 ~~ 241 (241)
T 1n10_A 240 SK 241 (241)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=6.3e-54 Score=375.87 Aligned_cols=199 Identities=22% Similarity=0.354 Sum_probs=178.9
Q ss_pred CCCCeeeEEEEEcCCCCCCCCCcCCCCCCcCCCCCCCCCeEEEcChhhcCCC----CCCCceEEEEeCCCCCccCCcEEE
Q 044280 36 SEPHWLPATATWYGSPEGDGSDGGACGYGSLVDVKPLRARVGAVSPVLFKNG----GGCGACYKVRCLDKSICSRRAVTI 111 (268)
Q Consensus 36 ~~~~~~~g~aT~Yg~~~g~g~~~GaCGyg~~~~~~p~~~~~aA~s~~~~~~g----~~CG~C~~V~c~~~~~C~~~sv~V 111 (268)
+..+.+.|+||||+.. ..+||||++ ..|++.++||+|..+|++| +.||+||||+|. +++|+|
T Consensus 2 ~~~~~~~G~aT~Y~~g----~~~GACG~~----~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~------~gsv~V 67 (208)
T 3d30_A 2 AYDDLHEGYATYTGSG----YSGGAFLLD----PIPSDMEITAINPADLNYGGVKAALAGSYLEVEGP------KGKTTV 67 (208)
T ss_dssp CTTCCEEEEEEECSTT----SSSCTTCCC----CCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET------TEEEEE
T ss_pred CCCCcEEEEEEEcCCC----CCCCcCCCC----CCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC------CCcEEE
Confidence 3456789999999984 357999993 2366789999999999987 899999999995 568999
Q ss_pred EEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCeecEEEEEEeeCCCCcceEEEEccCCCCceEEEEEEeeC
Q 044280 112 IVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGELPVIYRRAPCKYPGKNIAFHVNEGSTDYWLSLLVEFED 191 (268)
Q Consensus 112 ~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~~~I~w~~V~C~~~g~ni~~~vk~Gss~~w~ai~v~n~~ 191 (268)
+|+|+||+ |.. .|||||+.||.+|+. ++.|+++|+||+|+|+++| +|+|++++|||+||++|+|+|++
T Consensus 68 ~v~D~CP~--C~~--~~~DLS~~aF~~la~-------~~~G~i~v~~~~V~C~~~G-~i~f~v~~Gs~~~~~~v~v~n~~ 135 (208)
T 3d30_A 68 YVTDLYPE--GAR--GALDLSPNAFRKIGN-------MKDGKINIKWRVVKAPITG-NFTYRIKEGSSRWWAAIQVRNHK 135 (208)
T ss_dssp EEEEECTT--CCT--TCEEECHHHHHHHSC-------GGGSSEEEEEEEECCCCCS-CCEEEECTTCSSSEEEEEEESCS
T ss_pred EEEECCCC--CCC--CeEECCHHHHHHhcc-------cCCCEEEEEEEEeCCCCCC-ceeEEEcCCCCCceEEEEEEecC
Confidence 99999999 954 899999999999986 3799999999999999999 99999999999999999999999
Q ss_pred CCCCeeEEEEEecCCCCeEEccccCCceEEEcCCCCCcceEEEEEECcCCeEEEEccccCCCCCC----CeEEecCCCCC
Q 044280 192 GDGDVGSMHIREASSSEWLQMNHVWGANWSIIGGPLKGPFSVKLATLSTGRTLSARAVIPSNWSP----KATYTSRLNFS 267 (268)
Q Consensus 192 g~~~I~sVei~~~g~~~w~~m~r~~gn~W~~~~~~~~~p~~lRiTs~~~G~~v~~~~vip~~~~~----g~~y~t~~QF~ 267 (268)
++|++|||+++ +.|++|+|+|+|.|..+ .++++|++||||+ .+||+| .++||++|+. +.+|++++||+
T Consensus 136 --g~v~~v~i~~~--~~W~~m~r~~~n~~~~~-~~~~~pls~rvT~-~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf~ 207 (208)
T 3d30_A 136 --YPVMKMEYEKD--GKWINMEKMDYNHFVST-NLGTGSLKVRMTD-IRGKVV--KDTIPKLPESGTSKAYTVPGHVQFP 207 (208)
T ss_dssp --SCEEEEEEEET--TEEEEEEECTTSCEEEE-CCCSSSEEEEEEE-TTCCEE--EEEECCCCSSCCSSCEEEECCCCCC
T ss_pred --CCEEEEEEecC--CcEEEccccccceeecC-CCCCCCEEEEEEE-CCCCEE--EEEECCCCccCcccceEEeCcCccC
Confidence 58999999986 58999999998777654 6778999999999 999999 7899999997 89999999998
Q ss_pred C
Q 044280 268 P 268 (268)
Q Consensus 268 ~ 268 (268)
+
T Consensus 208 ~ 208 (208)
T 3d30_A 208 E 208 (208)
T ss_dssp C
T ss_pred C
Confidence 6
No 4
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.96 E-value=1.7e-28 Score=191.06 Aligned_cols=97 Identities=25% Similarity=0.468 Sum_probs=91.8
Q ss_pred cceEEEEccCCCCceEEEEEEeeCCCCCeeEEEEEecCCCCeEEccccCCceEEEcC-CCCCcceEEEEEECcCCeEEEE
Q 044280 168 KNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREASSSEWLQMNHVWGANWSIIG-GPLKGPFSVKLATLSTGRTLSA 246 (268)
Q Consensus 168 ~ni~~~vk~Gss~~w~ai~v~n~~g~~~I~sVei~~~g~~~w~~m~r~~gn~W~~~~-~~~~~p~~lRiTs~~~G~~v~~ 246 (268)
++|+|+|++||++||++|+|.|++|+++|++|+|+++++..|++|+| ||++|+++. .++++||+||||+ .+|+++++
T Consensus 2 ~~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~GplSfRvt~-~~G~~~v~ 79 (100)
T 3ft1_A 2 VQVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVGPFNFRFMS-KGGMRNVF 79 (100)
T ss_dssp BEEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCSSEEEEEEE-TTCCEEEE
T ss_pred CCEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCCCEEEEEEE-cCCcEEEE
Confidence 48999999999999999999999999999999999997778999999 999999964 4788899999999 99999999
Q ss_pred ccccCCCCCCCeEEecCCCC
Q 044280 247 RAVIPSNWSPKATYTSRLNF 266 (268)
Q Consensus 247 ~~vip~~~~~g~~y~t~~QF 266 (268)
.||||++|++|++|++.+||
T Consensus 80 ~nViPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 80 DEVIPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp EEEECTTCCTTCEECCCCBC
T ss_pred CeEeCCCCCCCcEEeccccc
Confidence 99999999999999999998
No 5
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.94 E-value=1.2e-27 Score=202.14 Aligned_cols=117 Identities=23% Similarity=0.381 Sum_probs=96.3
Q ss_pred CCeeeEEEEEcCCCCCCCCCcCCCCCCc----CCCCCCCCCeEEEcChhhcCCC------CCCCceEEEEeCCCC-----
Q 044280 38 PHWLPATATWYGSPEGDGSDGGACGYGS----LVDVKPLRARVGAVSPVLFKNG------GGCGACYKVRCLDKS----- 102 (268)
Q Consensus 38 ~~~~~g~aT~Yg~~~g~g~~~GaCGyg~----~~~~~p~~~~~aA~s~~~~~~g------~~CG~C~~V~c~~~~----- 102 (268)
.+|..+.||||++. .+||||||+ +..+++++.++||+|+.||++| +.||+||||+|.+++
T Consensus 12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg 86 (181)
T 1wc2_A 12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG 86 (181)
T ss_dssp TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence 56999999999985 479999973 3344467889999999999997 899999999997643
Q ss_pred -Ccc-CCcEEEEEEccCCC-----CCCCCC-----------CCceeeCHHHHhhhhhcCCccccccCCeecEEEEEEeeC
Q 044280 103 -ICS-RRAVTIIVTDECPG-----GYCSNG-----------RTHFDLSGAAFGRMAIAGESGELRNRGELPVIYRRAPCK 164 (268)
Q Consensus 103 -~C~-~~sv~V~VtD~Cp~-----~~C~~~-----------~~~~DLs~~AF~~la~~~~~~~~~~~G~~~I~w~~V~C~ 164 (268)
.|. +++|+|||||.||. +||.++ +.||||+.+| .+|+. ...|+++|+||+|+|+
T Consensus 87 ~~~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~-------~~~GivpV~yrrV~C~ 158 (181)
T 1wc2_A 87 GPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTG-------MGWNNPETTWEVVNCD 158 (181)
T ss_dssp CCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGG-------GTCSSEEEEEEEECHH
T ss_pred ccCCCCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhh-------hcCCCceeEEEEEeCC
Confidence 122 45899999999993 399643 6899999999 88885 3689999999999998
Q ss_pred CCC
Q 044280 165 YPG 167 (268)
Q Consensus 165 ~~g 167 (268)
..+
T Consensus 159 ~~~ 161 (181)
T 1wc2_A 159 SEH 161 (181)
T ss_dssp HHH
T ss_pred CCC
Confidence 633
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.94 E-value=3.2e-26 Score=180.12 Aligned_cols=97 Identities=25% Similarity=0.488 Sum_probs=90.0
Q ss_pred CCcceEEEEccCCCCceEEEEEEeeCCCCCeeEEEEEecCCCCeEEccccCCceEEEcC-CCCCcceEEEEEECcCCeEE
Q 044280 166 PGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREASSSEWLQMNHVWGANWSIIG-GPLKGPFSVKLATLSTGRTL 244 (268)
Q Consensus 166 ~g~ni~~~vk~Gss~~w~ai~v~n~~g~~~I~sVei~~~g~~~w~~m~r~~gn~W~~~~-~~~~~p~~lRiTs~~~G~~v 244 (268)
.|.||.|+|+++|++||++|+|.|++|+++|++|+|++.++..|++|+|+ |++|+++. .++++||+||||+ .+|+++
T Consensus 11 ~g~~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~GplSfRvtt-s~G~~~ 88 (108)
T 2jnz_A 11 SAVQVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVGPFNFRFMS-KGGMRN 88 (108)
T ss_dssp CCCEEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCSSEEEEEEE-TTTEEE
T ss_pred CCccEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCCCEEEEEEE-cCCcEE
Confidence 35699999999999999999999999999999999998667899999999 99999953 4678899999999 999999
Q ss_pred EEccccCCCCCCCeEEecCC
Q 044280 245 SARAVIPSNWSPKATYTSRL 264 (268)
Q Consensus 245 ~~~~vip~~~~~g~~y~t~~ 264 (268)
++.||||++|++|++|++.+
T Consensus 89 va~nViPa~W~~Gqty~s~v 108 (108)
T 2jnz_A 89 VFDEVIPTAFSIGKTYKPEE 108 (108)
T ss_dssp EEEEEECSSCCTTCEECCCC
T ss_pred EECeEECCCCCCCCEEeCCC
Confidence 99999999999999999864
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.91 E-value=2.5e-26 Score=177.71 Aligned_cols=93 Identities=30% Similarity=0.612 Sum_probs=85.4
Q ss_pred ceEEEEccCCCCceEEEEEEeeCCCCCeeEEEEEecCCCCeEEccccCCceEEEcCC-CCCcceEEEEEECcCCeEEEEc
Q 044280 169 NIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREASSSEWLQMNHVWGANWSIIGG-PLKGPFSVKLATLSTGRTLSAR 247 (268)
Q Consensus 169 ni~~~vk~Gss~~w~ai~v~n~~g~~~I~sVei~~~g~~~w~~m~r~~gn~W~~~~~-~~~~p~~lRiTs~~~G~~v~~~ 247 (268)
+|+|+|++||++||++|+|.|++ ++|++|||++++++.|++|+|+||++|+++.. ++++||+||||+ .+|+++++.
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~GplSfRvt~-~~G~~~v~~ 79 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFLT-EKGMKNVFD 79 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCCCCCBCCEE-TTTEECCBS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCCCEEEEEEE-cCCcEEEEe
Confidence 79999999999999999999998 88999999997678999999999999999543 567899999999 999999999
Q ss_pred cccCCCCCCCeEEecCC
Q 044280 248 AVIPSNWSPKATYTSRL 264 (268)
Q Consensus 248 ~vip~~~~~g~~y~t~~ 264 (268)
||||++|++|++|++.+
T Consensus 80 nViP~~W~~G~ty~~~~ 96 (96)
T 1bmw_A 80 DVVPEKYTIGATYAPEE 96 (96)
T ss_dssp SCSCSSCCSSSCCCC--
T ss_pred eEeCCCCCCCCEEeCCC
Confidence 99999999999999863
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.63 E-value=1.2e-16 Score=128.24 Aligned_cols=74 Identities=23% Similarity=0.443 Sum_probs=59.6
Q ss_pred EEcChhhc-CCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeC-HHHHhhhhhcCCccccccCCee
Q 044280 77 GAVSPVLF-KNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLS-GAAFGRMAIAGESGELRNRGEL 154 (268)
Q Consensus 77 aA~s~~~~-~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs-~~AF~~la~~~~~~~~~~~G~~ 154 (268)
.|+..++. +++..||+|++|++.. ++++|+|+|+|+||. | +|||| +.||++|+.++ +.++.|++
T Consensus 49 tA~~g~~gp~~g~~CG~cv~Vtn~~----nGksV~V~VvD~CP~--g-----gLDLS~~~AF~~Ia~~g---~G~~~G~i 114 (125)
T 1bw3_A 49 TAFCGPAGPRGQAACGKCLRVTNPA----TGAQITARIVDQCAN--G-----GLDLDWDTVFTKIDTNG---IGYQQGHL 114 (125)
T ss_dssp EESCSTTCCCSGGGTTCEEEEEETT----TTEEEEEEEEECCSS--S-----SCCSCSSSSHHHHCSSC---HHHHHSEE
T ss_pred eEeccCCCCCCCcccCCEEEeEeCC----CCCEEEEEEEEeCCC--C-----CCCCCCHHHHHHHhccC---CcccCcEE
Confidence 34443443 6788999999999974 367999999999998 4 49999 99999999632 11468999
Q ss_pred cEEEEEEeeC
Q 044280 155 PVIYRRAPCK 164 (268)
Q Consensus 155 ~I~w~~V~C~ 164 (268)
+|+|++|+|+
T Consensus 115 ~V~w~~V~C~ 124 (125)
T 1bw3_A 115 NVNYQFVDCR 124 (125)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEEeCC
Confidence 9999999997
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.18 E-value=2e-10 Score=87.92 Aligned_cols=94 Identities=26% Similarity=0.257 Sum_probs=73.7
Q ss_pred eeEEEEEcCCCCCCCCCcCCCCCCcCCCCCCCCCeEEEcChhhcCCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCC
Q 044280 41 LPATATWYGSPEGDGSDGGACGYGSLVDVKPLRARVGAVSPVLFKNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGG 120 (268)
Q Consensus 41 ~~g~aT~Yg~~~g~g~~~GaCGyg~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~ 120 (268)
..|.|+||+..-. -...|||- .+. ...++||-.+ ..||..++||... ++++|+|+|.|.||-
T Consensus 2 ~~G~ASwYg~~f~--G~~TA~Ge--~~~---~~~~tAAH~t------lP~gt~vrVtNl~----nGksVvVrVnDRGP~- 63 (95)
T 4avr_A 2 DTGEASYYGSRHA--GLRTASGE--RYN---PNAMTAAHRT------LPFGARVRVTNLD----NRRSVVVRINDRGPF- 63 (95)
T ss_dssp EEEEEEECCGGGT--TSBCTTSC--BCC---TTSCEEECSS------SCTTCEEEEEETT----TCCEEEEEEEECCCC-
T ss_pred CEEEEEEECCccC--CCCCCCcc--CcC---CCCCEEEcCC------CCCCcEEEEEECC----CCcEEEEEEccCCCC-
Confidence 4799999996311 13578876 222 2457888864 4899999999875 478999999999998
Q ss_pred CCCCCCCceeeCHHHHhhhhhcCCccccccCCeecEEEEEEe
Q 044280 121 YCSNGRTHFDLSGAAFGRMAIAGESGELRNRGELPVIYRRAP 162 (268)
Q Consensus 121 ~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~~~I~w~~V~ 162 (268)
|.. ..+|||..||.+|+. .+.|+.+|+|+.++
T Consensus 64 -~~g--riIDLS~aAa~~Lg~-------~~~G~~~V~ve~~~ 95 (95)
T 4avr_A 64 -RRG--RIIDVSRKAAEGLGM-------IRSGVAPVRIESLD 95 (95)
T ss_dssp -STT--EEEEECHHHHHHHTC-------TTTSCEEEEEEEC-
T ss_pred -CCC--CEEEeCHHHHHHhCC-------cCCCEEEEEEEEeC
Confidence 875 689999999999985 47999999999863
No 10
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.23 E-value=4.1e-06 Score=67.11 Aligned_cols=68 Identities=24% Similarity=0.463 Sum_probs=55.5
Q ss_pred eEEEcCh-hhcCCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCe
Q 044280 75 RVGAVSP-VLFKNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGE 153 (268)
Q Consensus 75 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~ 153 (268)
.|.+... .-|+ +..||.|+||+.+ ++++|.|+.+|.-++ .|+++.+||+.|.+. ...|+
T Consensus 51 ~IGga~~iagWN-S~~CGtC~~lty~-----ng~sI~vlaID~A~~--------gFnIs~~Amn~LT~G------~~lG~ 110 (129)
T 2kqa_A 51 NVGGIPDIAGWD-SPSCGTCWKVTIP-----NGNSIFIRGVDSGRG--------GFNVNPTAFTKLVGS------TEAGR 110 (129)
T ss_dssp SEEEETTCCSTT-CTTCSCEEEEEET-----TTEEEEEEEEEECSS--------SEEECHHHHHHHHSS------SSSCC
T ss_pred eeccchhhccCC-CCCCCceEEEEEc-----CCCEEEEEEEccCCC--------ceeehHHHHHHhcCC------cccCc
Confidence 4544443 3466 7999999999995 277999999999764 699999999999974 36899
Q ss_pred e-cEEEEEEe
Q 044280 154 L-PVIYRRAP 162 (268)
Q Consensus 154 ~-~I~w~~V~ 162 (268)
+ +++|++|+
T Consensus 111 V~~a~~~qV~ 120 (129)
T 2kqa_A 111 VDNVNYVQVD 120 (129)
T ss_dssp BCSCEEEECC
T ss_pred EeEEEEEEcC
Confidence 9 99999996
No 11
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=98.19 E-value=3.6e-06 Score=66.86 Aligned_cols=69 Identities=17% Similarity=0.471 Sum_probs=53.9
Q ss_pred eEEEcCh-hhcCCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCe
Q 044280 75 RVGAVSP-VLFKNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGE 153 (268)
Q Consensus 75 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~ 153 (268)
.|.+... .-| |+..||.|+|++.. +++|.|+.+|.-++ .|+|+.+||+.|.+ |++ ...|+
T Consensus 45 ~IGg~~~i~gw-ns~~CGtC~~lty~------g~si~vlaID~a~~--------Gfnis~~A~n~LT~-G~a---~~lG~ 105 (120)
T 3m3g_A 45 YIGGAAAVAGW-NSASCGTCWKLQYS------GHTIYVLAVDHAAS--------GFNIALDAMNALTG-GQA---VQLGR 105 (120)
T ss_dssp SEEEETTCCST-TCTTTTCEEEEEET------TEEEEEEEEEECSS--------SEEECHHHHHHHHT-SCH---HHHCE
T ss_pred ccccccccccC-CCCCCCceEEEEEC------CeEEEEEEEecCCC--------ceeecHHHHHHhhC-Ccc---eeeee
Confidence 4544432 335 45899999999994 77999999999764 69999999999996 332 24699
Q ss_pred ecEEEEEEe
Q 044280 154 LPVIYRRAP 162 (268)
Q Consensus 154 ~~I~w~~V~ 162 (268)
|+++|++|+
T Consensus 106 V~a~~~~V~ 114 (120)
T 3m3g_A 106 VSATATQVP 114 (120)
T ss_dssp EECEEEEEC
T ss_pred EeEEEEEcC
Confidence 999999997
No 12
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=98.13 E-value=5.1e-06 Score=66.15 Aligned_cols=70 Identities=19% Similarity=0.414 Sum_probs=54.6
Q ss_pred EEEcCh-hhcCCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCee
Q 044280 76 VGAVSP-VLFKNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGEL 154 (268)
Q Consensus 76 ~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~~ 154 (268)
|.+... .-|++ ..||.|+|++... .+++|.|+.+|.-++ .|+|+.+||+.|.+. ++ ...|++
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~----~g~si~vlaID~a~~--------Gfnis~~Amn~LT~G-~a---~~lG~V 108 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSG----TGKTIHVVGVDVAGN--------GFNVGQRAMDDLTNG-QA---VALGNI 108 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETT----TTEEEEEEEEEECSS--------SEEECHHHHHHHHTS-CH---HHHSEE
T ss_pred cccccccccCCC-CCCCceEEEEEcC----CCcEEEEEEEecCCC--------ceeehHHHHHHhcCC-cc---eecceE
Confidence 544433 34654 9999999999952 267999999999764 599999999999963 22 246999
Q ss_pred cEEEEEEe
Q 044280 155 PVIYRRAP 162 (268)
Q Consensus 155 ~I~w~~V~ 162 (268)
+++|++|+
T Consensus 109 ~a~~~qV~ 116 (122)
T 3sul_A 109 DVTATLVD 116 (122)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEcC
Confidence 99999997
No 13
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.12 E-value=3.4e-06 Score=67.59 Aligned_cols=65 Identities=18% Similarity=0.404 Sum_probs=50.7
Q ss_pred CCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCeecEEEEEEee
Q 044280 86 NGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGELPVIYRRAPC 163 (268)
Q Consensus 86 ~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~~~I~w~~V~C 163 (268)
|+..||.|+|++..+.. -..++|.|+.+|.-++ .|+|+.+||+.|.+. ++ ...|+|+++|++|+=
T Consensus 56 ns~~CGtC~~lty~g~~-~~~~si~vlaID~a~~--------Gfnis~~Amn~LT~g-~a---~~lG~V~~~~~~V~~ 120 (127)
T 3suj_A 56 NSPNCGSCYQLTYSSAH-TTPKSIYMVAIDRSAE--------GFTASKQAMDDLTNK-RA---EELGTVNVDVRKVDF 120 (127)
T ss_dssp TCTTTTCEEEEEECCSS-SCCEEEEEEEEEECSS--------SEEECHHHHHHHHTS-CH---HHHSSEEEEEEEECG
T ss_pred CCCCCCceEEEEECCCC-CcceEEEEEEEecCCC--------ceeecHHHHHHhcCC-cc---ccceeEEEEEEEeCH
Confidence 45899999999996311 0126999999999764 599999999999863 22 246899999999973
No 14
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=98.08 E-value=8.8e-06 Score=65.62 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=55.3
Q ss_pred eEEEcChhhcCCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCee
Q 044280 75 RVGAVSPVLFKNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGEL 154 (268)
Q Consensus 75 ~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~~ 154 (268)
.|.+.. | ++..||.|+||+.. +++|.|+.+|.-.+ . .-|||+.+||+.|.+...+-+....|+|
T Consensus 49 ~igg~~---w-ns~~CGtCwkLtY~------G~sI~vlaID~a~~----g--~~FnIs~~Amn~LT~G~~a~~a~elG~V 112 (136)
T 3sum_A 49 HFVAAP---E-AQTECGSCWKLRYK------GNHAFVTVVDRVEE----A--NLFVGGTDLVKNLTTFNGAPEGYDWGTA 112 (136)
T ss_dssp SEEECC---B-TTBCTTCEEEEEET------TEEEEEEEEECCCS----T--TEEEECHHHHHHHTCBTTBCHHHHHSEE
T ss_pred cccccc---c-CCCCCCceEEEEEC------CeEEEEEEEecCCC----c--ceEeehHHHHHHHhCCCccccceeccee
Confidence 466655 4 56899999999995 67999999999664 0 1299999999999864211112357999
Q ss_pred cE-EEEEEee
Q 044280 155 PV-IYRRAPC 163 (268)
Q Consensus 155 ~I-~w~~V~C 163 (268)
++ +|++|+=
T Consensus 113 da~~~~qVd~ 122 (136)
T 3sum_A 113 QLFSAYQVDG 122 (136)
T ss_dssp ECSEEEEECG
T ss_pred eeeEEEEcCH
Confidence 99 9999973
No 15
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.08 E-value=3.8e-06 Score=67.18 Aligned_cols=73 Identities=21% Similarity=0.425 Sum_probs=54.0
Q ss_pred eEEEcCh-hhcCCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeCHHHHhhhhhcCCccccccCCe
Q 044280 75 RVGAVSP-VLFKNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAIAGESGELRNRGE 153 (268)
Q Consensus 75 ~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs~~AF~~la~~~~~~~~~~~G~ 153 (268)
.|.+... .-|+ +..||.|+|++..++. ..++|.|+.+|.-++ .|+|+.+||+.|.+. ++ ...|+
T Consensus 46 ~IGg~~~i~gwn-S~~CGtC~~lty~g~~--~~~si~vlaID~a~~--------Gfnis~~Amn~LT~G-~a---~~lG~ 110 (125)
T 3suk_A 46 HIGASSDIGGFN-SPACGNCYTISFTFQG--VTRSINLVAIDHAGN--------GFNVAQAAMDELTNG-NA---VALGT 110 (125)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEEEETT--EEEEEEEEEEEECSS--------SEEECHHHHHHHHTS-CH---HHHCE
T ss_pred eeccccccccCC-CCCCCeeEEEEEcCCC--cceEEEEEEEecCCC--------ceeecHHHHHHhcCC-cc---cccce
Confidence 3444432 3354 5899999999985210 126999999999764 599999999999863 22 23599
Q ss_pred ecEEEEEEe
Q 044280 154 LPVIYRRAP 162 (268)
Q Consensus 154 ~~I~w~~V~ 162 (268)
|+++|++|+
T Consensus 111 V~~~~~~V~ 119 (125)
T 3suk_A 111 IDVQSQQVA 119 (125)
T ss_dssp EEEEEEEEC
T ss_pred EeEEEEEcC
Confidence 999999997
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=95.41 E-value=0.0069 Score=51.99 Aligned_cols=52 Identities=25% Similarity=0.399 Sum_probs=34.5
Q ss_pred EEEcChhhcCCCCCCCceEEEEeCCCCCccCCcEEEEEEccCCCCCCCCCCCceeeC
Q 044280 76 VGAVSPVLFKNGGGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLS 132 (268)
Q Consensus 76 ~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~sv~V~VtD~Cp~~~C~~~~~~~DLs 132 (268)
+||.+-.--.....|++||+++-++.. ..+|+++|+||+...+ -..+||||.
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~-~~GKkmiVQ~TNtG~D----l~~n~FDl~ 123 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSGP-VAGKKMVVQSTSTGGD----LGSNHFDLN 123 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSGG-GTTCEEEEEEEEC---------CCEEEEE
T ss_pred eeeeeccCCccccccceeEEEEEcCCC-cCCCEEEEEEecccCC----CCCCceeEe
Confidence 567653211223679999999987643 4678999999999876 234899995
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=44.02 E-value=21 Score=25.86 Aligned_cols=18 Identities=33% Similarity=0.765 Sum_probs=14.8
Q ss_pred hhcCCCCCCCceEEEEeC
Q 044280 82 VLFKNGGGCGACYKVRCL 99 (268)
Q Consensus 82 ~~~~~g~~CG~C~~V~c~ 99 (268)
..|.+|..||.|++|.-.
T Consensus 25 ~~~ygGlHCGE~feV~v~ 42 (81)
T 3nrl_A 25 ESFYGGLHCGECFDVKVK 42 (81)
T ss_dssp TEECCCCCTTCEEEEEET
T ss_pred ccccCCcccccEEEEEEC
Confidence 346789999999999863
No 18
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=39.60 E-value=17 Score=26.68 Aligned_cols=47 Identities=15% Similarity=0.206 Sum_probs=26.9
Q ss_pred EEEEEEeeCCCCCeeEEEEE---ecCCCCeEEccccCCceEEEcC--CCCCcceEEEE
Q 044280 183 LSLLVEFEDGDGDVGSMHIR---EASSSEWLQMNHVWGANWSIIG--GPLKGPFSVKL 235 (268)
Q Consensus 183 ~ai~v~n~~g~~~I~sVei~---~~g~~~w~~m~r~~gn~W~~~~--~~~~~p~~lRi 235 (268)
+.+.|. + .|+...-|+ ....+.|..|.+.| .|.+.. .+...|++||.
T Consensus 33 Ls~YVp--K--KDLEE~VVs~E~~~~WGG~vtLaNGw--~l~lp~l~~~~~LPiTveA 84 (87)
T 2jn4_A 33 HSAYVA--K--KDLEELIVEMENPALWGGKVTLANGW--QLELPAMAADTPLPITVEA 84 (87)
T ss_dssp EEEEET--T--TTEEEEEEEESSSSSCSSEEEETTSC--EEECCCCSSSCSSCEEECC
T ss_pred eEEEEe--C--CcchhheeeeecccccCcEEEECCcc--EEEeCCCCCCCCCCEEEEE
Confidence 667664 3 445444443 33345677886644 666642 34567888874
No 19
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=35.03 E-value=49 Score=30.46 Aligned_cols=24 Identities=13% Similarity=0.295 Sum_probs=18.6
Q ss_pred eCCCCCeeEEEEEecCCCCeEEcc
Q 044280 190 EDGDGDVGSMHIREASSSEWLQMN 213 (268)
Q Consensus 190 ~~g~~~I~sVei~~~g~~~w~~m~ 213 (268)
.+|..+|++|||...++.+|+...
T Consensus 279 sGgg~~I~rVEVS~DgG~tW~~A~ 302 (372)
T 2a9d_A 279 SGGGREVVRVDVSLDGGRTWKVAR 302 (372)
T ss_dssp CSTTCCEEEEEEESBSSSSCEECE
T ss_pred cCCCCCEEEEEEEcCCCCcceEeE
Confidence 343457999999999888998644
No 20
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=30.27 E-value=64 Score=30.60 Aligned_cols=24 Identities=13% Similarity=0.295 Sum_probs=18.6
Q ss_pred eCCCCCeeEEEEEecCCCCeEEcc
Q 044280 190 EDGDGDVGSMHIREASSSEWLQMN 213 (268)
Q Consensus 190 ~~g~~~I~sVei~~~g~~~w~~m~ 213 (268)
.+|..+|++|||...++.+|+...
T Consensus 373 sggg~~I~rVEVS~DgG~tW~~A~ 396 (466)
T 1sox_A 373 SGGGREVVRVDVSLDGGRTWKVAR 396 (466)
T ss_dssp CSTTCCEEEEEEESBTTSSCEECE
T ss_pred cCCCCCEEEEEEEcCCCCcceEee
Confidence 343457999999999888998654
No 21
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=28.41 E-value=90 Score=28.89 Aligned_cols=24 Identities=13% Similarity=0.426 Sum_probs=19.1
Q ss_pred eCCCCCeeEEEEEecCCCCeEEcc
Q 044280 190 EDGDGDVGSMHIREASSSEWLQMN 213 (268)
Q Consensus 190 ~~g~~~I~sVei~~~g~~~w~~m~ 213 (268)
.+|...|+.|||...++.+|+...
T Consensus 292 sGgg~~I~rVEVS~DgG~tW~~A~ 315 (393)
T 1ogp_A 292 SGGGRGIERVDISLDGGKNWVEAS 315 (393)
T ss_dssp CSTTCCEEEEEEESSTTSSCEECE
T ss_pred cCCCCCEEEEEEEcCCCCCceEee
Confidence 444568999999999888998544
No 22
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=27.71 E-value=1e+02 Score=22.68 Aligned_cols=46 Identities=9% Similarity=0.036 Sum_probs=25.4
Q ss_pred CCeeEEEEEecCCCCeEEccccCCceEEEcCCCCCcceEEEEEECcCCe
Q 044280 194 GDVGSMHIREASSSEWLQMNHVWGANWSIIGGPLKGPFSVKLATLSTGR 242 (268)
Q Consensus 194 ~~I~sVei~~~g~~~w~~m~r~~gn~W~~~~~~~~~p~~lRiTs~~~G~ 242 (268)
+.|.+||+...+..-...-.+.|.-.|.. ....-.+..|.|+ ..|.
T Consensus 30 g~V~kVef~vdg~~vg~dt~apy~~~w~~--~~G~htl~a~AtD-~~G~ 75 (98)
T 3pe9_A 30 GKISRVDFLVDGEVIGSDREAPYEYEWKA--VEGNHEISVIAYD-DDDA 75 (98)
T ss_dssp SCEEEEEEEETTEEEEEECSSSEEEEEEC--CSEEEEEEEEEEE-TTCC
T ss_pred CCEEEEEEEECCEEecccccCCEEEEEEc--CCccEEEEEEEEE-CCCC
Confidence 56999999987532223333333223432 2222356666788 7774
No 23
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=26.40 E-value=49 Score=30.49 Aligned_cols=51 Identities=14% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCCCCeeEEEEEecCCCCeEEcccc-----CC-ceEEEcCCCCCcc--eEEEEEECcCCe
Q 044280 191 DGDGDVGSMHIREASSSEWLQMNHV-----WG-ANWSIIGGPLKGP--FSVKLATLSTGR 242 (268)
Q Consensus 191 ~g~~~I~sVei~~~g~~~w~~m~r~-----~g-n~W~~~~~~~~~p--~~lRiTs~~~G~ 242 (268)
.|...|+.|||..+++.+|+...-. |- -.|.+.-....++ +.+|-++ .+|.
T Consensus 289 ~Gg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~W~~W~~~~~~~~g~~~i~~RA~D-~~g~ 347 (373)
T 2blf_A 289 DGGYGITQVSVSADAGKSWTNATLDPGLGKYSFRGWKAVLPLTKGDHVLMCRATN-ARGE 347 (373)
T ss_dssp CSSSCEEEEEEESSTTSSCEECEECCCSCTTSCEEEEEEEEECSEEEEEEEEEEE-TTSC
T ss_pred cCCCCEEEEEEEeCCCCCceEeEeCCCCCCCeEEEEEEEEEcCCCcEEEEEEEEc-CCCC
Confidence 4557899999999988899854321 11 2455531123344 5566788 6664
No 24
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=21.76 E-value=2.3e+02 Score=20.38 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=33.5
Q ss_pred ecEEEEEEeeCCCCcceEEEEccCCCCceEEEEEEeeCCCCCeeEEEEEecCCCCeE--EccccCCceEEE----cCCCC
Q 044280 154 LPVIYRRAPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREASSSEWL--QMNHVWGANWSI----IGGPL 227 (268)
Q Consensus 154 ~~I~w~~V~C~~~g~ni~~~vk~Gss~~w~ai~v~n~~g~~~I~sVei~~~g~~~w~--~m~r~~gn~W~~----~~~~~ 227 (268)
.+.++ .++|...+.++++.+..-+.. ....+|+..+.++|. -..+..| .+.+ ++...
T Consensus 9 ~p~~f-~i~~~~g~~~l~v~V~~PsG~---------------~~~~~v~d~~dGtY~v~ytP~e~G-~h~v~V~~~g~~I 71 (93)
T 2d7n_A 9 RPFNL-VIPFAVQKGELTGEVRMPSGK---------------TARPNITDNKDGTITVRYAPTEKG-LHQMGIKYDGNHI 71 (93)
T ss_dssp CCEEE-EECCCCSSSCEEEEEECTTSC---------------EECCEEEECSSSCEEEEECCSSCE-EEEEEEEESSSCC
T ss_pred CCEEE-EEEcCCCCCCEEEEEECCCCC---------------ccceEEEECCCCEEEEEEEccCCE-EEEEEEEECCEeC
Confidence 45565 577766444677666543322 222344444334342 2233334 3332 23334
Q ss_pred -CcceEEEEEE
Q 044280 228 -KGPFSVKLAT 237 (268)
Q Consensus 228 -~~p~~lRiTs 237 (268)
..||++++..
T Consensus 72 ~GSPF~v~V~~ 82 (93)
T 2d7n_A 72 PGSPLQFYVDA 82 (93)
T ss_dssp TTCSEEEEECB
T ss_pred CCCCeEEEEec
Confidence 4699999876
No 25
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=20.35 E-value=85 Score=23.17 Aligned_cols=31 Identities=16% Similarity=0.358 Sum_probs=20.7
Q ss_pred ceEEEEEECc-CCeE--EEEccccCCCCCCCeEE
Q 044280 230 PFSVKLATLS-TGRT--LSARAVIPSNWSPKATY 260 (268)
Q Consensus 230 p~~lRiTs~~-~G~~--v~~~~vip~~~~~g~~y 260 (268)
-++|+||+.. .+++ |++..++|..|+.|.-.
T Consensus 30 ~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgV 63 (94)
T 2kct_A 30 GVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEV 63 (94)
T ss_dssp EEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEE
T ss_pred EEEEEEEcCCCCCcEEEEEECCCCCccccCCCeE
Confidence 4788888821 1443 45568999999887643
Done!