Query 044282
Match_columns 275
No_of_seqs 274 out of 2061
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 13:09:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044282.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044282hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 4.3E-74 9.4E-79 492.4 10.8 240 1-241 50-290 (303)
2 KOG0374 Serine/threonine speci 100.0 3.8E-72 8.3E-77 512.7 20.4 237 1-237 66-304 (331)
3 PTZ00480 serine/threonine-prot 100.0 2E-68 4.2E-73 486.7 22.9 239 1-239 66-304 (320)
4 PTZ00244 serine/threonine-prot 100.0 2E-67 4.4E-72 476.8 21.5 235 1-235 59-293 (294)
5 cd07420 MPP_RdgC Drosophila me 100.0 5.6E-67 1.2E-71 477.8 23.0 232 1-233 58-320 (321)
6 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 2.8E-67 6.1E-72 476.3 20.6 236 1-236 57-292 (293)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 5.6E-67 1.2E-71 472.6 21.9 236 1-237 49-285 (285)
8 PTZ00239 serine/threonine prot 100.0 4.9E-66 1.1E-70 469.2 22.6 238 1-239 50-289 (303)
9 smart00156 PP2Ac Protein phosp 100.0 7.3E-66 1.6E-70 463.2 23.1 236 1-236 35-270 (271)
10 KOG0373 Serine/threonine speci 100.0 6.2E-67 1.3E-71 442.3 12.0 239 1-240 53-293 (306)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.4E-65 3.1E-70 469.0 21.1 238 1-239 67-307 (316)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 7E-65 1.5E-69 463.2 23.7 238 1-239 50-300 (305)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 3.4E-63 7.4E-68 453.7 22.5 235 1-235 55-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 1.7E-60 3.7E-65 441.4 23.3 235 1-236 73-366 (377)
15 KOG0375 Serine-threonine phosp 100.0 6.4E-60 1.4E-64 423.2 7.2 237 1-238 95-344 (517)
16 KOG0371 Serine/threonine prote 100.0 9.3E-59 2E-63 400.3 10.7 238 1-239 67-305 (319)
17 KOG0377 Protein serine/threoni 100.0 1.5E-51 3.3E-56 376.8 4.6 235 1-236 172-432 (631)
18 KOG0376 Serine-threonine phosp 100.0 5.1E-46 1.1E-50 346.5 11.4 239 1-240 221-462 (476)
19 cd00144 MPP_PPP_family phospho 100.0 2.3E-36 4.9E-41 263.7 19.2 210 1-221 5-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.9 2.2E-26 4.7E-31 199.8 14.7 171 1-206 5-196 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 2.2E-25 4.8E-30 198.0 14.8 114 1-116 8-145 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 2.3E-24 5.1E-29 188.8 14.3 111 1-114 6-143 (222)
23 cd07422 MPP_ApaH Escherichia c 99.9 4.2E-24 9.1E-29 190.6 9.7 119 1-124 6-131 (257)
24 cd07423 MPP_PrpE Bacillus subt 99.9 5.2E-23 1.1E-27 181.6 15.1 113 1-116 8-142 (234)
25 PRK00166 apaH diadenosine tetr 99.9 7.2E-23 1.6E-27 184.5 15.3 113 1-117 8-127 (275)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 2.4E-23 5.3E-28 186.5 11.0 120 1-125 8-134 (279)
27 PRK11439 pphA serine/threonine 99.9 6.7E-23 1.5E-27 179.1 11.6 170 1-209 24-208 (218)
28 PHA02239 putative protein phos 99.9 5.1E-22 1.1E-26 175.3 12.2 164 1-206 8-218 (235)
29 cd07421 MPP_Rhilphs Rhilph pho 99.9 2E-21 4.4E-26 174.6 14.9 68 1-68 9-83 (304)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2.2E-21 4.9E-26 168.0 13.2 162 1-193 8-184 (207)
31 PRK09968 serine/threonine-spec 99.8 1.7E-20 3.8E-25 163.9 11.1 108 1-114 22-144 (218)
32 PF00149 Metallophos: Calcineu 99.3 4E-11 8.7E-16 96.2 9.8 152 1-188 8-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.2 1.4E-09 3E-14 89.4 15.0 54 1-66 7-60 (155)
34 COG0639 ApaH Diadenosine tetra 99.1 1.5E-10 3.3E-15 92.7 7.3 144 67-211 3-155 (155)
35 PF12850 Metallophos_2: Calcin 99.0 1E-08 2.2E-13 83.6 12.2 145 1-223 8-152 (156)
36 TIGR00040 yfcE phosphoesterase 99.0 1.6E-08 3.4E-13 83.7 13.1 56 1-65 8-64 (158)
37 cd07379 MPP_239FB Homo sapiens 98.8 1.4E-08 3E-13 81.8 8.6 112 1-193 7-120 (135)
38 PRK09453 phosphodiesterase; Pr 98.8 1.8E-08 3.9E-13 85.4 8.3 62 1-66 8-77 (182)
39 cd00838 MPP_superfamily metall 98.7 2.7E-07 5.9E-12 71.6 10.1 113 1-193 5-119 (131)
40 cd07388 MPP_Tt1561 Thermus the 98.6 6.5E-07 1.4E-11 78.7 13.2 64 1-65 12-75 (224)
41 cd07404 MPP_MS158 Microscilla 98.6 2.4E-07 5.3E-12 77.0 8.8 62 1-65 6-68 (166)
42 cd07394 MPP_Vps29 Homo sapiens 98.6 3.5E-06 7.5E-11 71.4 15.5 53 1-65 7-65 (178)
43 cd07397 MPP_DevT Myxococcus xa 98.6 4.4E-07 9.5E-12 80.3 9.7 57 1-67 8-65 (238)
44 cd07392 MPP_PAE1087 Pyrobaculu 98.5 7.7E-07 1.7E-11 74.7 10.7 60 1-66 6-66 (188)
45 cd07403 MPP_TTHA0053 Thermus t 98.4 4.7E-06 1E-10 66.8 10.7 103 1-193 5-107 (129)
46 PRK05340 UDP-2,3-diacylglucosa 98.4 1.3E-05 2.8E-10 71.0 14.0 198 1-226 8-232 (241)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.2 5.8E-06 1.3E-10 72.8 9.2 201 1-226 6-230 (231)
48 cd07400 MPP_YydB Bacillus subt 98.2 1.9E-05 4.2E-10 63.7 11.6 102 12-194 27-130 (144)
49 TIGR03729 acc_ester putative p 98.2 9.6E-06 2.1E-10 71.6 9.1 62 1-65 7-74 (239)
50 cd07399 MPP_YvnB Bacillus subt 98.1 0.00014 3E-09 63.3 14.4 70 165-235 136-213 (214)
51 PRK11148 cyclic 3',5'-adenosin 98.0 0.00047 1E-08 62.1 16.5 58 6-65 39-98 (275)
52 COG0622 Predicted phosphoester 97.9 0.00045 9.8E-09 58.3 14.1 153 1-235 9-165 (172)
53 cd07395 MPP_CSTP1 Homo sapiens 97.9 0.00057 1.2E-08 60.9 14.9 58 167-226 196-254 (262)
54 PRK11340 phosphodiesterase Yae 97.8 4.8E-05 1E-09 68.6 6.4 63 1-65 57-125 (271)
55 PRK04036 DNA polymerase II sma 97.7 0.0022 4.8E-08 62.9 17.8 85 21-112 285-387 (504)
56 cd07383 MPP_Dcr2 Saccharomyces 97.7 0.00058 1.3E-08 58.4 11.9 44 20-63 41-87 (199)
57 cd07385 MPP_YkuE_C Bacillus su 97.7 5.6E-05 1.2E-09 65.4 5.6 64 1-66 9-77 (223)
58 cd07396 MPP_Nbla03831 Homo sap 97.7 0.0012 2.6E-08 59.3 14.0 62 6-67 26-88 (267)
59 cd07401 MPP_TMEM62_N Homo sapi 97.6 0.00086 1.9E-08 60.0 11.4 27 169-195 190-216 (256)
60 cd07393 MPP_DR1119 Deinococcus 97.6 0.0017 3.8E-08 57.1 13.2 45 165-211 181-228 (232)
61 COG2129 Predicted phosphoester 97.5 0.012 2.5E-07 51.5 17.3 197 1-225 11-217 (226)
62 cd07384 MPP_Cdc1_like Saccharo 97.5 0.001 2.2E-08 56.0 10.2 48 19-66 44-101 (171)
63 COG1409 Icc Predicted phosphoh 97.4 0.0086 1.9E-07 53.3 15.2 63 6-69 19-82 (301)
64 COG2908 Uncharacterized protei 97.3 0.00085 1.8E-08 59.0 7.2 186 9-227 19-229 (237)
65 cd07390 MPP_AQ1575 Aquifex aeo 97.3 0.0015 3.3E-08 54.5 8.4 44 19-67 41-84 (168)
66 cd08165 MPP_MPPE1 human MPPE1 97.3 0.0053 1.1E-07 50.8 11.5 47 20-66 38-90 (156)
67 TIGR00619 sbcd exonuclease Sbc 97.2 0.00075 1.6E-08 60.3 6.4 59 8-66 27-89 (253)
68 cd07391 MPP_PF1019 Pyrococcus 97.1 0.00089 1.9E-08 56.1 5.5 59 8-66 29-89 (172)
69 cd07398 MPP_YbbF-LpxH Escheric 97.1 0.002 4.3E-08 55.4 7.4 29 165-193 177-205 (217)
70 PHA02546 47 endonuclease subun 97.1 0.001 2.2E-08 62.1 5.9 60 7-66 26-90 (340)
71 cd00840 MPP_Mre11_N Mre11 nucl 97.0 0.0014 3.1E-08 56.2 6.1 61 8-68 29-92 (223)
72 COG1408 Predicted phosphohydro 96.8 0.013 2.8E-07 53.4 10.8 44 22-67 75-120 (284)
73 cd07402 MPP_GpdQ Enterobacter 96.8 0.0036 7.8E-08 54.7 6.8 56 6-65 24-83 (240)
74 cd07386 MPP_DNA_pol_II_small_a 96.6 0.013 2.9E-07 51.7 9.1 43 22-66 37-95 (243)
75 cd08163 MPP_Cdc1 Saccharomyces 96.6 0.086 1.9E-06 47.3 14.4 30 164-195 203-232 (257)
76 cd00839 MPP_PAPs purple acid p 96.6 0.013 2.7E-07 52.9 8.8 35 166-200 182-216 (294)
77 cd08166 MPP_Cdc1_like_1 unchar 96.5 0.0052 1.1E-07 52.9 5.6 46 20-65 42-93 (195)
78 TIGR00583 mre11 DNA repair pro 96.5 0.007 1.5E-07 57.8 7.0 61 6-66 28-124 (405)
79 TIGR00024 SbcD_rel_arch putati 96.4 0.0082 1.8E-07 52.8 6.1 54 9-66 47-103 (225)
80 KOG0376 Serine-threonine phosp 96.3 0.00041 8.8E-09 66.3 -2.7 199 1-211 53-299 (476)
81 PRK10966 exonuclease subunit S 95.8 0.017 3.7E-07 55.2 5.9 56 10-66 29-88 (407)
82 cd08164 MPP_Ted1 Saccharomyces 95.6 0.03 6.6E-07 48.1 5.9 66 1-66 24-112 (193)
83 cd00844 MPP_Dbr1_N Dbr1 RNA la 95.4 0.048 1E-06 49.1 6.8 65 1-65 6-86 (262)
84 COG0420 SbcD DNA repair exonuc 95.4 0.033 7.2E-07 52.6 6.1 62 7-68 27-91 (390)
85 COG4186 Predicted phosphoester 95.3 0.038 8.3E-07 45.7 5.3 44 19-66 44-87 (186)
86 cd00845 MPP_UshA_N_like Escher 94.9 0.042 9.2E-07 48.4 5.0 60 1-65 8-82 (252)
87 KOG0918 Selenium-binding prote 94.6 0.0044 9.5E-08 58.1 -2.3 194 22-226 49-251 (476)
88 cd07410 MPP_CpdB_N Escherichia 94.1 0.063 1.4E-06 48.3 4.2 21 169-189 209-230 (277)
89 PF06874 FBPase_2: Firmicute f 93.8 0.079 1.7E-06 52.7 4.4 70 165-236 507-586 (640)
90 cd07380 MPP_CWF19_N Schizosacc 92.8 0.34 7.4E-06 39.9 6.2 115 1-188 5-121 (150)
91 cd07408 MPP_SA0022_N Staphyloc 92.7 0.19 4.1E-06 44.8 4.9 60 1-65 8-82 (257)
92 PF14582 Metallophos_3: Metall 92.2 0.13 2.8E-06 45.3 3.1 65 1-66 13-103 (255)
93 cd00842 MPP_ASMase acid sphing 92.2 0.3 6.5E-06 44.2 5.7 61 8-68 54-125 (296)
94 COG1311 HYS2 Archaeal DNA poly 92.2 6.9 0.00015 38.1 14.9 149 54-225 310-461 (481)
95 cd07412 MPP_YhcR_N Bacillus su 91.9 0.19 4.1E-06 45.7 4.0 60 1-65 8-88 (288)
96 KOG3662 Cell division control 91.7 0.33 7.2E-06 46.2 5.4 57 9-65 81-144 (410)
97 cd07387 MPP_PolD2_C PolD2 (DNA 91.6 9.1 0.0002 34.4 14.4 49 178-231 204-255 (257)
98 cd07411 MPP_SoxB_N Thermus the 91.2 0.35 7.7E-06 43.2 4.9 53 7-65 36-95 (264)
99 cd07378 MPP_ACP5 Homo sapiens 91.1 0.31 6.7E-06 43.5 4.4 24 167-190 191-214 (277)
100 cd07406 MPP_CG11883_N Drosophi 90.3 0.48 1E-05 42.2 4.9 56 4-64 21-82 (257)
101 COG1407 Predicted ICC-like pho 89.6 0.85 1.8E-05 40.3 5.7 46 20-68 63-113 (235)
102 cd07409 MPP_CD73_N CD73 ecto-5 87.5 1.1 2.5E-05 40.4 5.4 55 6-65 34-94 (281)
103 PLN02533 probable purple acid 87.3 0.78 1.7E-05 44.2 4.4 24 167-190 312-335 (427)
104 PRK09419 bifunctional 2',3'-cy 86.1 0.94 2E-05 49.1 4.7 60 1-65 668-736 (1163)
105 COG0737 UshA 5'-nucleotidase/2 84.6 1.2 2.5E-05 43.9 4.2 61 1-66 34-116 (517)
106 cd08162 MPP_PhoA_N Synechococc 83.5 1.8 3.8E-05 40.0 4.6 59 1-64 8-90 (313)
107 KOG3325 Membrane coat complex 81.5 23 0.00051 29.3 9.8 99 13-194 22-124 (183)
108 cd07407 MPP_YHR202W_N Saccharo 81.4 1.9 4.1E-05 39.2 4.0 38 23-65 53-97 (282)
109 COG3855 Fbp Uncharacterized pr 81.3 1.2 2.5E-05 43.1 2.6 41 22-67 192-232 (648)
110 TIGR01390 CycNucDiestase 2',3' 79.9 2.3 5.1E-05 43.0 4.4 60 1-65 10-99 (626)
111 KOG1432 Predicted DNA repair e 79.7 3.1 6.8E-05 38.8 4.7 48 19-67 99-149 (379)
112 PRK09420 cpdB bifunctional 2', 78.7 2.8 6E-05 42.7 4.5 60 1-65 33-122 (649)
113 cd07405 MPP_UshA_N Escherichia 78.4 2.4 5.2E-05 38.4 3.6 15 176-190 208-222 (285)
114 PRK09419 bifunctional 2',3'-cy 73.2 4.1 8.9E-05 44.3 4.3 24 166-189 256-280 (1163)
115 KOG2863 RNA lariat debranching 71.9 5.4 0.00012 37.5 4.1 64 3-66 10-89 (456)
116 TIGR01530 nadN NAD pyrophospha 71.3 6.9 0.00015 38.9 5.1 41 20-65 49-94 (550)
117 KOG3339 Predicted glycosyltran 70.2 27 0.00059 29.9 7.6 85 22-111 40-140 (211)
118 PRK11907 bifunctional 2',3'-cy 69.3 6.4 0.00014 41.1 4.5 40 21-65 160-213 (814)
119 COG1768 Predicted phosphohydro 67.2 5.6 0.00012 34.0 2.9 73 20-103 43-117 (230)
120 PF04042 DNA_pol_E_B: DNA poly 66.5 7.1 0.00015 33.2 3.6 62 6-67 16-93 (209)
121 PF06874 FBPase_2: Firmicute f 63.5 13 0.00028 37.4 5.1 41 22-67 186-226 (640)
122 PRK09418 bifunctional 2',3'-cy 55.2 16 0.00034 38.1 4.3 17 173-189 272-289 (780)
123 PRK09558 ushA bifunctional UDP 53.9 15 0.00033 36.4 3.9 18 171-188 236-256 (551)
124 PTZ00422 glideosome-associated 47.0 25 0.00055 33.6 4.0 23 168-190 239-261 (394)
125 TIGR00282 metallophosphoestera 39.5 50 0.0011 29.8 4.5 60 1-65 8-71 (266)
126 KOG3425 Uncharacterized conser 38.6 1.2E+02 0.0025 24.2 5.8 57 6-65 12-79 (128)
127 KOG2310 DNA repair exonuclease 38.5 77 0.0017 31.7 5.8 42 5-46 37-78 (646)
128 smart00854 PGA_cap Bacterial c 38.2 67 0.0015 28.0 5.1 37 172-210 200-236 (239)
129 PF09949 DUF2183: Uncharacteri 36.4 1.1E+02 0.0023 23.3 5.3 22 7-30 14-35 (100)
130 PF13258 DUF4049: Domain of un 33.9 33 0.00071 30.6 2.4 87 22-115 86-186 (318)
131 TIGR00282 metallophosphoestera 30.6 60 0.0013 29.3 3.6 39 23-65 2-41 (266)
132 PF02875 Mur_ligase_C: Mur lig 29.8 95 0.0021 22.4 4.0 58 5-62 23-82 (91)
133 cd07381 MPP_CapA CapA and rela 29.5 92 0.002 27.0 4.6 36 172-209 202-237 (239)
134 COG1692 Calcineurin-like phosp 27.9 59 0.0013 29.2 2.9 37 23-61 2-39 (266)
135 PF12641 Flavodoxin_3: Flavodo 27.9 1.1E+02 0.0024 25.3 4.5 34 21-57 39-72 (160)
136 cd07382 MPP_DR1281 Deinococcus 26.3 1.2E+02 0.0026 27.1 4.7 52 9-65 17-70 (255)
137 PF09637 Med18: Med18 protein; 24.1 1.6E+02 0.0034 26.1 5.1 67 136-205 107-176 (250)
138 PLN00084 photosystem II subuni 24.1 42 0.00091 28.2 1.2 36 27-63 9-51 (214)
139 COG3433 Aryl carrier domain [S 23.7 39 0.00085 24.3 0.9 22 28-49 22-43 (74)
140 COG3309 VapD Uncharacterized v 23.3 1.4E+02 0.0031 22.4 3.8 38 6-46 25-62 (96)
141 cd07382 MPP_DR1281 Deinococcus 22.8 71 0.0015 28.6 2.6 39 23-64 1-39 (255)
142 PF10083 DUF2321: Uncharacteri 22.6 64 0.0014 26.7 2.0 45 164-214 22-75 (158)
143 cd01445 TST_Repeats Thiosulfat 22.5 2.9E+02 0.0064 21.8 6.0 52 7-61 81-132 (138)
144 KOG3770 Acid sphingomyelinase 21.5 2.1E+02 0.0045 28.8 5.7 62 8-69 196-267 (577)
145 cd07398 MPP_YbbF-LpxH Escheric 21.4 1E+02 0.0023 25.8 3.3 46 20-66 30-83 (217)
146 PF09587 PGA_cap: Bacterial ca 21.3 1.8E+02 0.0039 25.4 4.9 40 169-210 208-247 (250)
147 PLN02965 Probable pheophorbida 20.7 3.3E+02 0.0072 23.3 6.4 21 167-187 59-81 (255)
148 PF05413 Peptidase_C34: Putati 20.2 48 0.001 24.3 0.7 10 54-63 79-88 (92)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-74 Score=492.41 Aligned_cols=240 Identities=50% Similarity=1.015 Sum_probs=233.5
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.||+.+|+..|.+++++|+|||||||||-.|+|++.||++||++||++|++||||||.+.++..|||++||.++
T Consensus 50 DIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrK 129 (303)
T KOG0372|consen 50 DIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRK 129 (303)
T ss_pred cccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc-hhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCC
Q 044282 81 FN-VRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRG 159 (275)
Q Consensus 81 ~~-~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 159 (275)
|+ ..+|+.+.+.|+.||++|+|++++||||||+||++.+++||+.+.|..++|+.+.++|+|||||.+. .+|..++||
T Consensus 130 YG~~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRG 208 (303)
T KOG0372|consen 130 YGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRG 208 (303)
T ss_pred cCChHHHHHHHHHHHhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCC
Confidence 96 6899999999999999999999999999999999999999999999999999999999999999865 699999999
Q ss_pred CceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccCCCC
Q 044282 160 VSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKK 239 (275)
Q Consensus 160 ~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 239 (275)
+|+.||++++++|++.||+++|+|+||.+.+||++.++++|+|||||||||+.+.|.||||.|+++....|.+|+.++..
T Consensus 209 aGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~ 288 (303)
T KOG0372|consen 209 AGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQE 288 (303)
T ss_pred ccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred CC
Q 044282 240 SK 241 (275)
Q Consensus 240 ~~ 241 (275)
++
T Consensus 289 ~~ 290 (303)
T KOG0372|consen 289 SR 290 (303)
T ss_pred hc
Confidence 43
No 2
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.8e-72 Score=512.74 Aligned_cols=237 Identities=77% Similarity=1.370 Sum_probs=233.2
Q ss_pred CCCCCHHHHHHHHHhcC-CCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGG-LPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 79 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g-~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~ 79 (275)
||||||.||+++|...| +|++.+|||||||||||++|+|++.+|+++|++||++|++||||||.+.++..|||++||..
T Consensus 66 DiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~r 145 (331)
T KOG0374|consen 66 DIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKR 145 (331)
T ss_pred cCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHH
Confidence 89999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhc-hhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCC
Q 044282 80 RFN-VRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDR 158 (275)
Q Consensus 80 ~~~-~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~r 158 (275)
+|+ ..+|+.|++.|+.||++|+|+++++|+|||++|.+.++++|++|.||.+.++.++++|++||||.....+|.+|.|
T Consensus 146 r~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~R 225 (331)
T KOG0374|consen 146 RYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDR 225 (331)
T ss_pred hcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCC
Confidence 999 6999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred CCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccCC
Q 044282 159 GVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSD 237 (275)
Q Consensus 159 g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 237 (275)
|.++.||++++++||+++++++||||||++++||++++++|++||||||+|||.++|.||+|.|++++.|+|++++|..
T Consensus 226 g~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 226 GVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred ceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEecccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999963
No 3
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2e-68 Score=486.73 Aligned_cols=239 Identities=82% Similarity=1.486 Sum_probs=232.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.+|.++|+..++++.++|||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+
T Consensus 66 DIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~ 145 (320)
T PTZ00480 66 DVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 145 (320)
T ss_pred ecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCC
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGV 160 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~ 160 (275)
|+..+|..+.++|++||++|++++++|||||||+|.+.++++|+++.||.+.++.+++.|+|||||.....+|.+++||.
T Consensus 146 y~~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~ 225 (320)
T PTZ00480 146 YTIKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGV 225 (320)
T ss_pred cCHHHHHHHHHHHHhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998778999999999
Q ss_pred ceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccCCCC
Q 044282 161 SFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKK 239 (275)
Q Consensus 161 ~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 239 (275)
++.||++++++||++|++++||||||++++||+++++++|+|||||||||+..+|+||+|.|++++.+.|++++|.+..
T Consensus 226 g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 226 SYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred ccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987554
No 4
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2e-67 Score=476.83 Aligned_cols=235 Identities=65% Similarity=1.215 Sum_probs=228.4
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.+|.++|+..++++.+++||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||.+++..+
T Consensus 59 DIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~ 138 (294)
T PTZ00244 59 DTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRR 138 (294)
T ss_pred cCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCC
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGV 160 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~ 160 (275)
|+.++|+.+.++|++||++++++++++|||||++|.+.++++++.++||.+.++.+++.|++||||.....+|.+++||.
T Consensus 139 y~~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~ 218 (294)
T PTZ00244 139 YNIKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGV 218 (294)
T ss_pred hhHHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987778999999999
Q ss_pred ceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEcc
Q 044282 161 SFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 235 (275)
Q Consensus 161 ~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p 235 (275)
++.||++++++||++||+++||||||++++||+++++++|+||||||||||..+|+||+|.|++++.++|.+++.
T Consensus 219 g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 219 SYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred ccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998764
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=5.6e-67 Score=477.75 Aligned_cols=232 Identities=39% Similarity=0.667 Sum_probs=213.6
Q ss_pred CCCCCHHHHHHHHHhcCCCC-CCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPP-KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 79 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~-~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~ 79 (275)
|||||+.+|.++|+..|+++ .++|||||||||||++|+||+.+|++||+++|+++++||||||.+.++..|||.+||..
T Consensus 58 DiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~ 137 (321)
T cd07420 58 DLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMS 137 (321)
T ss_pred eCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHH
Confidence 89999999999999999985 46899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhc---hhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCC-----CCC-----------------
Q 044282 80 RFN---VRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTD-----VPD----------------- 134 (275)
Q Consensus 80 ~~~---~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~-----~~~----------------- 134 (275)
+|+ .++|+.+.++|++||+||++++++|||||||+| ..++++|+.|.|+.. .+.
T Consensus 138 ~y~~~~~~l~~~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 216 (321)
T cd07420 138 KYKLHGKKILRLLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEP 216 (321)
T ss_pred HhCccHHHHHHHHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCcccccccccccccccccc
Confidence 997 689999999999999999999999999999997 568999999887421 111
Q ss_pred -----CCcccccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCC
Q 044282 135 -----TGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNY 209 (275)
Q Consensus 135 -----~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y 209 (275)
.+++.|+|||||......|.+++||.++.||++++++||++|++++||||||++++||++.++++|+||||||||
T Consensus 217 ~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY 296 (321)
T cd07420 217 LDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNY 296 (321)
T ss_pred ccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCcc
Confidence 146789999999866555777799999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEEEcCCCceEEEEE
Q 044282 210 CGEFDNAGAMMSVDETLMCSFQIL 233 (275)
Q Consensus 210 ~~~~~N~ga~l~i~~~~~~~~~~~ 233 (275)
|+.++|+||+|.|++++.++|+++
T Consensus 297 ~~~~~N~gavl~i~~~~~~~f~~~ 320 (321)
T cd07420 297 YEEGSNRGAYIKLGPDLTPHFVQY 320 (321)
T ss_pred CCCCCccEEEEEECCCCceeEEEe
Confidence 999999999999999999988775
No 6
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=2.8e-67 Score=476.26 Aligned_cols=236 Identities=88% Similarity=1.552 Sum_probs=230.3
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.+|.++|+..++++.+++||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+
T Consensus 57 DIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~ 136 (293)
T cd07414 57 DIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 136 (293)
T ss_pred ecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCC
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGV 160 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~ 160 (275)
|+.++|..+.++|++||++|+++++++|||||++|.+.++++++.+.||.+.++.+++.|+|||||.....+|.+|+||.
T Consensus 137 y~~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~ 216 (293)
T cd07414 137 YNIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGV 216 (293)
T ss_pred hhHHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998788999999999
Q ss_pred ceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccC
Q 044282 161 SFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPS 236 (275)
Q Consensus 161 ~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 236 (275)
++.||++++++||++||+++||||||++++||+++++++|+|||||||||+..+|+||+|.|++++++.|++++|.
T Consensus 217 g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 217 SFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999875
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=5.6e-67 Score=472.64 Aligned_cols=236 Identities=53% Similarity=1.040 Sum_probs=228.2
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.+|.++|+..++++.+++||||||||||++|+|++.++++||+.+|.++++||||||.+.++..|||.+|+..+
T Consensus 49 DIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~ 128 (285)
T cd07415 49 DIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRK 128 (285)
T ss_pred eCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hch-hhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCC
Q 044282 81 FNV-RLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRG 159 (275)
Q Consensus 81 ~~~-~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 159 (275)
|+. .+|+.+.++|++||++|+++++++||||||+|.+.+++++++++||.+.+..+.+.|+|||||... .+|.+++||
T Consensus 129 y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg 207 (285)
T cd07415 129 YGNANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRG 207 (285)
T ss_pred cCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCC
Confidence 974 899999999999999999999999999999999999999999999999999999999999999864 789999999
Q ss_pred CceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccCC
Q 044282 160 VSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSD 237 (275)
Q Consensus 160 ~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 237 (275)
.++.||++++++||++||+++||||||++++||++.++++|+|||||||||+.++|+||+|.|+++++++|.+++|.+
T Consensus 208 ~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 208 AGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred CccccCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999864
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=4.9e-66 Score=469.25 Aligned_cols=238 Identities=47% Similarity=0.972 Sum_probs=227.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.+|.++|+..+.++.+++||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+
T Consensus 50 DIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~k 129 (303)
T PTZ00239 50 DIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRK 129 (303)
T ss_pred eCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hch-hhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCC
Q 044282 81 FNV-RLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRG 159 (275)
Q Consensus 81 ~~~-~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 159 (275)
|+. .+|+.+.++|++||++++++++++||||||+|.+.++++++.+.||.+.+..+.++|+|||||.. ..+|.+++||
T Consensus 130 y~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg 208 (303)
T PTZ00239 130 YGNSNPWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRG 208 (303)
T ss_pred hcChhHHHHHHHHHHhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCC
Confidence 974 78999999999999999999999999999999999999999999999999999999999999974 4789999999
Q ss_pred CceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecC-CeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccCCC
Q 044282 160 VSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFAN-RQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK 238 (275)
Q Consensus 160 ~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~-~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~ 238 (275)
.++.||++++++||++||+++||||||++++||++.++ ++|+|||||||||+..+|+||+|.+++++.+.|.+++|.+.
T Consensus 209 ~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~ 288 (303)
T PTZ00239 209 AGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPE 288 (303)
T ss_pred CccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCc
Confidence 99999999999999999999999999999999998654 56999999999999999999999999999999999999876
Q ss_pred C
Q 044282 239 K 239 (275)
Q Consensus 239 ~ 239 (275)
+
T Consensus 289 ~ 289 (303)
T PTZ00239 289 S 289 (303)
T ss_pred c
Confidence 5
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.3e-66 Score=463.18 Aligned_cols=236 Identities=61% Similarity=1.114 Sum_probs=229.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.+|.++|+..+.++.+++||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+
T Consensus 35 DiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~ 114 (271)
T smart00156 35 DIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRK 114 (271)
T ss_pred eCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCC
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGV 160 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~ 160 (275)
|+.++|+.+.++|++||++++++++++|||||++|.+.++++++++.||.+.++.+++.|+|||||.....+|.+|+||.
T Consensus 115 ~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~ 194 (271)
T smart00156 115 YGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKLKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGA 194 (271)
T ss_pred cCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcccCCCCCCchhhhhheeecCCCcccCCCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987778999999999
Q ss_pred ceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccC
Q 044282 161 SFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPS 236 (275)
Q Consensus 161 ~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 236 (275)
++.||++++++||++||+++||||||++++||+++++++|+|||||||||+.++|+||++.|++++++++.+++|.
T Consensus 195 g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 195 SYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred ccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECCcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998875
No 10
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-67 Score=442.31 Aligned_cols=239 Identities=47% Similarity=0.966 Sum_probs=231.4
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.||+++|+..|--|.++|||+|||||||-.|+|+..+|+.||.+||.++.+||||||.+.+...|||++||..+
T Consensus 53 DIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~K 132 (306)
T KOG0373|consen 53 DIHGQFYDLLELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNK 132 (306)
T ss_pred ccchhHHHHHHHHHhcCCCCCcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc-hhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCC
Q 044282 81 FN-VRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRG 159 (275)
Q Consensus 81 ~~-~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 159 (275)
|+ ...|+.+.++|+.|+++|+|+++++|||||+||++..++||+-|.|..++|..+.++|++||||+. .+.|..++||
T Consensus 133 YGnan~wkycckVFD~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRG 211 (306)
T KOG0373|consen 133 YGNANVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRG 211 (306)
T ss_pred cCCchHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCC
Confidence 96 589999999999999999999999999999999999999999999999999999999999999975 7899999999
Q ss_pred CceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCe-EEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccCCC
Q 044282 160 VSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQ-LVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK 238 (275)
Q Consensus 160 ~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~-~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~ 238 (275)
+|+.||.++..+|...|++++|+|+||.+++||++.++.| ++|||||||||+.+.|.|+||+++++++.++++|...+.
T Consensus 212 AGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd 291 (306)
T KOG0373|consen 212 AGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPD 291 (306)
T ss_pred cceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCC
Confidence 9999999999999999999999999999999999977777 999999999999999999999999999999999998876
Q ss_pred CC
Q 044282 239 KS 240 (275)
Q Consensus 239 ~~ 240 (275)
.+
T Consensus 292 ~~ 293 (306)
T KOG0373|consen 292 NS 293 (306)
T ss_pred cc
Confidence 53
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.4e-65 Score=469.02 Aligned_cols=238 Identities=44% Similarity=0.847 Sum_probs=226.3
Q ss_pred CCCCCHHHHHHHHHhcCCCCC-CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 79 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~ 79 (275)
||||||.+|.++|+..++++. +++||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..|+..
T Consensus 67 DIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~ 146 (316)
T cd07417 67 DTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKA 146 (316)
T ss_pred cccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhh
Confidence 899999999999999998765 4699999999999999999999999999999999999999999999999999999999
Q ss_pred HhchhhhhccccccccCCeEEEEcCeEEEecCCC-CCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCC
Q 044282 80 RFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGL-SPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDR 158 (275)
Q Consensus 80 ~~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi-~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~r 158 (275)
+|+..+|+.+.++|++||++++++++++|||||+ ++...++++++++.|+.+.+..+++.|+|||||... .+|.+++|
T Consensus 147 k~~~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~R 225 (316)
T cd07417 147 KYNEQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKR 225 (316)
T ss_pred cccHHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCC
Confidence 9999999999999999999999999999999999 567889999999999998888999999999999854 57899999
Q ss_pred CCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcC-CCceEEEEEccCC
Q 044282 159 GVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDE-TLMCSFQILKPSD 237 (275)
Q Consensus 159 g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~-~~~~~~~~~~p~~ 237 (275)
|.++.||++++++||++||+++||||||++++||+++++++|+|||||||||+.++|+||+|.|++ ++++.|++++|.+
T Consensus 226 g~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~ 305 (316)
T cd07417 226 GVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVP 305 (316)
T ss_pred CCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999 8999999999876
Q ss_pred CC
Q 044282 238 KK 239 (275)
Q Consensus 238 ~~ 239 (275)
..
T Consensus 306 ~~ 307 (316)
T cd07417 306 HP 307 (316)
T ss_pred CC
Confidence 65
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=7e-65 Score=463.21 Aligned_cols=238 Identities=45% Similarity=0.873 Sum_probs=225.2
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|||||+.+|.++|+..+.++.++|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+
T Consensus 50 DIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~ 129 (305)
T cd07416 50 DIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 129 (305)
T ss_pred eCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCC------Ccc
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQ------GWG 154 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~------~~~ 154 (275)
|+.++|+.+.++|++||++++++++++|||||++|.+.++++|+++.||.+.+..++++|+|||||..... +|.
T Consensus 130 y~~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~ 209 (305)
T cd07416 130 YSERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFV 209 (305)
T ss_pred ccHHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999988899999999999975432 476
Q ss_pred cC-CCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCC------eEEEEecCCCCCCCCCCcEEEEEEcCCCc
Q 044282 155 MN-DRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANR------QLVTIFSAPNYCGEFDNAGAMMSVDETLM 227 (275)
Q Consensus 155 ~~-~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~------~~itifSa~~y~~~~~N~ga~l~i~~~~~ 227 (275)
++ +||.++.||++++++||++||+++||||||++++||++++++ +|+|||||||||+.++|+||+|.|+++.
T Consensus 210 ~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~- 288 (305)
T cd07416 210 HNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV- 288 (305)
T ss_pred ccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-
Confidence 65 899999999999999999999999999999999999998876 8999999999999999999999999985
Q ss_pred eEEEEEccCCCC
Q 044282 228 CSFQILKPSDKK 239 (275)
Q Consensus 228 ~~~~~~~p~~~~ 239 (275)
+.|+++.|.+..
T Consensus 289 ~~~~~~~~~~~~ 300 (305)
T cd07416 289 MNIRQFNCSPHP 300 (305)
T ss_pred ceEEEecCCCCC
Confidence 689999988664
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=3.4e-63 Score=453.68 Aligned_cols=235 Identities=48% Similarity=0.922 Sum_probs=219.4
Q ss_pred CCCCCHHHHHHHHHhcCCCCC--------CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcC
Q 044282 1 DIHGQYSDLLRLFEYGGLPPK--------ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 72 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~--------~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~g 72 (275)
|||||+.+|.++|+..++++. .++||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..+|
T Consensus 55 DIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~g 134 (311)
T cd07419 55 DIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFG 134 (311)
T ss_pred eccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhc
Confidence 899999999999999998754 579999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhch------hhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCC-CCCCCCcccccccCC
Q 044282 73 FYDECKRRFNV------RLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPT-DVPDTGLLCDLLWSD 145 (275)
Q Consensus 73 f~~e~~~~~~~------~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~-~~~~~~~~~dllWsd 145 (275)
|..++..+++. .+|..+.++|++||++++++++++|||||++|.+.++++++.+.||. ..+..+++.|++|||
T Consensus 135 f~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsD 214 (311)
T cd07419 135 FREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSD 214 (311)
T ss_pred ccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccC
Confidence 99999998864 58899999999999999999999999999999999999999999997 445667899999999
Q ss_pred CCCC--CCCcccCC---CCCc--eeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEE
Q 044282 146 PSKD--IQGWGMND---RGVS--FTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGA 218 (275)
Q Consensus 146 p~~~--~~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga 218 (275)
|... ..++.+++ ||.+ +.||++++++||++||+++||||||++++||++.++++|+|||||||||+.++|+||
T Consensus 215 P~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~a 294 (311)
T cd07419 215 PTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGA 294 (311)
T ss_pred ccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEE
Confidence 9864 35666665 8887 799999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCceEEEEEcc
Q 044282 219 MMSVDETLMCSFQILKP 235 (275)
Q Consensus 219 ~l~i~~~~~~~~~~~~p 235 (275)
++.|++++++++.+++|
T Consensus 295 i~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 295 ILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EEEECCCCcEeEEEeCC
Confidence 99999999999999997
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.7e-60 Score=441.42 Aligned_cols=235 Identities=38% Similarity=0.723 Sum_probs=209.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCC-CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 79 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~ 79 (275)
|||||+.+|.++|+..++++. ..|||||||||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||.+|+..
T Consensus 73 DIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~ 152 (377)
T cd07418 73 DVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLT 152 (377)
T ss_pred ecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhh
Confidence 899999999999999999875 4699999999999999999999999999999999999999999999999999999999
Q ss_pred Hhch---hhhhccccccccCCeEEEEcCeEEEecCCC---------------------------CCCCCCHHHHHhcCCC
Q 044282 80 RFNV---RLWKTFTDCFNCLPVAALIDEKILCMHGGL---------------------------SPDLHSLDQIRSLQRP 129 (275)
Q Consensus 80 ~~~~---~~~~~~~~~f~~LPla~iv~~~il~vHgGi---------------------------~p~~~~l~~i~~i~rp 129 (275)
+|+. .+|+.+.++|++||+++++++++||||||| +|.+.++++|++++||
T Consensus 153 ~y~~~~~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~ 232 (377)
T cd07418 153 KYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRS 232 (377)
T ss_pred hcCchHHHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCC
Confidence 9964 699999999999999999999999999999 4456799999999997
Q ss_pred C-CCCCCC---cccccccCCCCCCCCCcccC-CCCCceeeChHHHHHHHHhCCCceEEEeeee------------eccce
Q 044282 130 T-DVPDTG---LLCDLLWSDPSKDIQGWGMN-DRGVSFTFGADKVTDFLQKHDLDLVCRAHQV------------VEDGY 192 (275)
Q Consensus 130 ~-~~~~~~---~~~dllWsdp~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~------------~~~G~ 192 (275)
. +.+..+ ++.|+|||||... .+|.++ .||.++.||++++++||++|++++||||||+ +++||
T Consensus 233 ~~~~~~~~~~~i~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy 311 (377)
T cd07418 233 VLDPPGEGSNLIPGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGY 311 (377)
T ss_pred CCCCCCCCccccceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCce
Confidence 4 555444 4789999999864 566665 7999999999999999999999999999996 68999
Q ss_pred EEecC---CeEEEEecCCCCC------CCCCCcEEEEEEcCCC--ceEEEEEccC
Q 044282 193 EFFAN---RQLVTIFSAPNYC------GEFDNAGAMMSVDETL--MCSFQILKPS 236 (275)
Q Consensus 193 ~~~~~---~~~itifSa~~y~------~~~~N~ga~l~i~~~~--~~~~~~~~p~ 236 (275)
++.++ ++|+||||||||| +.++|+||++.++.+. ..+|++++.+
T Consensus 312 ~~~~~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 312 TVDHDVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred EEeccCCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 99876 8999999999999 6789999999996654 5666665543
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6.4e-60 Score=423.16 Aligned_cols=237 Identities=44% Similarity=0.889 Sum_probs=221.7
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
||||||.||+++|+..|.|.+++|+|||||||||.+|+||+.+|.+||+.||..+++||||||++-+...+.|+.||.-+
T Consensus 95 DIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iK 174 (517)
T KOG0375|consen 95 DIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIK 174 (517)
T ss_pred ccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCC------CCcc
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDI------QGWG 154 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~------~~~~ 154 (275)
|+.++|++..+.|+.||+||+.++.++|||||+||++.++++|+++.|..++|..+.+||+|||||.++. +.|.
T Consensus 175 Yse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~ 254 (517)
T KOG0375|consen 175 YSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFT 254 (517)
T ss_pred ccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998652 2344
Q ss_pred cC-CCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCe------EEEEecCCCCCCCCCCcEEEEEEcCCCc
Q 044282 155 MN-DRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQ------LVTIFSAPNYCGEFDNAGAMMSVDETLM 227 (275)
Q Consensus 155 ~~-~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~------~itifSa~~y~~~~~N~ga~l~i~~~~~ 227 (275)
.| .||++|.|.-.|+++||+.||+--|||+||.++.||+++.+.| +|||||||||-+.|+|+||||+-.++.
T Consensus 255 hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV- 333 (517)
T KOG0375|consen 255 HNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV- 333 (517)
T ss_pred cCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhccc-
Confidence 44 7999999999999999999999999999999999999987665 899999999999999999999987775
Q ss_pred eEEEEEccCCC
Q 044282 228 CSFQILKPSDK 238 (275)
Q Consensus 228 ~~~~~~~p~~~ 238 (275)
..+++|.-++.
T Consensus 334 MNIRQFncSPH 344 (517)
T KOG0375|consen 334 MNIRQFNCSPH 344 (517)
T ss_pred ceeeccCCCCC
Confidence 46666655444
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-59 Score=400.29 Aligned_cols=238 Identities=52% Similarity=1.012 Sum_probs=230.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|+||||++|+++++.-|..++..++|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||.++
T Consensus 67 DvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRk 146 (319)
T KOG0371|consen 67 DVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRK 146 (319)
T ss_pred CcchhHHHHHHHHHccCCCCCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc-hhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCC
Q 044282 81 FN-VRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRG 159 (275)
Q Consensus 81 ~~-~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 159 (275)
|+ ...|+.|.+.|+++|+.+.|++++||.|||++|++.+++.++.+.|-.++|.++.++|+|||||+. .-+|+.++||
T Consensus 147 yg~anvw~~Ftdlfdy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprg 225 (319)
T KOG0371|consen 147 YGNANVWKYFTDLFDYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRG 225 (319)
T ss_pred cccccchHHhhhhhhccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCC
Confidence 94 689999999999999999999999999999999999999999999999999999999999999974 5789999999
Q ss_pred CceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEEccCCCC
Q 044282 160 VSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKK 239 (275)
Q Consensus 160 ~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 239 (275)
.++.||.+..++|-.+||++++-|+||.+++||.+.....++|||||||||+...|.+|++.+++.....|.+|+|++.+
T Consensus 226 ag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k 305 (319)
T KOG0371|consen 226 AGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRK 305 (319)
T ss_pred CCcccchhhHHHhhccCCchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997665
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-51 Score=376.82 Aligned_cols=235 Identities=36% Similarity=0.659 Sum_probs=211.2
Q ss_pred CCCCCHHHHHHHHHhcCCCCCC-eEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKA-NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 79 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~-~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~ 79 (275)
|+||.++||.-+|-+.|+|..+ -|||.||+||||.+|+|+|++|+++-+.||..+|+-|||||+.++|..|||..|+..
T Consensus 172 DLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~ 251 (631)
T KOG0377|consen 172 DLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVES 251 (631)
T ss_pred cccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHH
Confidence 8999999999999999999765 599999999999999999999999999999999999999999999999999999999
Q ss_pred Hh---chhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCC---------CCCC-------------C
Q 044282 80 RF---NVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRP---------TDVP-------------D 134 (275)
Q Consensus 80 ~~---~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp---------~~~~-------------~ 134 (275)
+| +.++.+.+.++|++||++.+++.++++||||+|. .++++-+.+|.|. .+.. +
T Consensus 252 KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dE 330 (631)
T KOG0377|consen 252 KYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDE 330 (631)
T ss_pred HhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHH
Confidence 98 5688899999999999999999999999999985 5577777766542 2110 1
Q ss_pred CCcccccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCC
Q 044282 135 TGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFD 214 (275)
Q Consensus 135 ~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~ 214 (275)
...+.|+|||||......|.+.-||.|++||++++.+||++++++++||+|||.++||++.++++|+|||||+||.....
T Consensus 331 W~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GS 410 (631)
T KOG0377|consen 331 WQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGS 410 (631)
T ss_pred HHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecC
Confidence 34567999999987766776668999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEcCCCceEEEEEccC
Q 044282 215 NAGAMMSVDETLMCSFQILKPS 236 (275)
Q Consensus 215 N~ga~l~i~~~~~~~~~~~~p~ 236 (275)
|+||++++.+.+...|.+...+
T Consensus 411 NrGAYikl~~~~~PhfvQY~a~ 432 (631)
T KOG0377|consen 411 NRGAYIKLGNQLTPHFVQYQAA 432 (631)
T ss_pred CCceEEEeCCCCCchHHHHHhh
Confidence 9999999999998887665543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.1e-46 Score=346.49 Aligned_cols=239 Identities=45% Similarity=0.873 Sum_probs=225.7
Q ss_pred CCCCCHHHHHHHHHhcCCCCC-CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 79 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~ 79 (275)
|+||++.++++++...|.|+. ..++|.||+||||..|.|++..+.+.|+.+|+++|++|||||...++..|||..++..
T Consensus 221 d~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~ 300 (476)
T KOG0376|consen 221 DTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKA 300 (476)
T ss_pred CccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhh
Confidence 799999999999999999875 5799999999999999999999999999999999999999999999999999999999
Q ss_pred HhchhhhhccccccccCCeEEEEcCeEEEecCCCC-CCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCC
Q 044282 80 RFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLS-PDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDR 158 (275)
Q Consensus 80 ~~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~-p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~r 158 (275)
+|+++.+..+.++|..||++..++++++.+|||+. +.-..++++++|.|+...++.+.+++++||||... .+..++.|
T Consensus 301 kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r 379 (476)
T KOG0376|consen 301 KYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKR 379 (476)
T ss_pred hhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccc-cCCCcccc
Confidence 99999999898999999999999999999999985 44568999999999988888999999999999754 78889999
Q ss_pred CCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEEEEccCC
Q 044282 159 GVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILKPSD 237 (275)
Q Consensus 159 g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~-~~~~~~~~~~~p~~ 237 (275)
|.+..||+++.+.||+.+++++|||||+..+.||++.++|+|+|||||||||...+|.||++.++ +++...+..+++.+
T Consensus 380 ~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp 459 (476)
T KOG0376|consen 380 GVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVP 459 (476)
T ss_pred CceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 77889999999887
Q ss_pred CCC
Q 044282 238 KKS 240 (275)
Q Consensus 238 ~~~ 240 (275)
...
T Consensus 460 ~~~ 462 (476)
T KOG0376|consen 460 HPD 462 (476)
T ss_pred CCC
Confidence 763
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=2.3e-36 Score=263.71 Aligned_cols=210 Identities=52% Similarity=0.857 Sum_probs=173.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHH---
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDEC--- 77 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~--- 77 (275)
||||++++|.++|+.++..+.+.+||||||||||++|.+++.++++++.. |.++++|+||||.+.++...++..+.
T Consensus 5 DiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~~~~~ 83 (225)
T cd00144 5 DIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDEDEWI 83 (225)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcchhhcc
Confidence 99999999999999999988899999999999999999999999998877 88999999999999887766554332
Q ss_pred ------HHHhchhhhhccccccccCCeEEEEcC-eEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCC
Q 044282 78 ------KRRFNVRLWKTFTDCFNCLPVAALIDE-KILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDI 150 (275)
Q Consensus 78 ------~~~~~~~~~~~~~~~f~~LPla~iv~~-~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~ 150 (275)
.......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|+||....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~~~~~ 157 (225)
T cd00144 84 GGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDPLELP 157 (225)
T ss_pred chhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCCCCCC
Confidence 222345677888899999999999887 99999999999876555443 22344566899999997543
Q ss_pred CCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEE
Q 044282 151 QGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMS 221 (275)
Q Consensus 151 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~ 221 (275)
.....+.++. |+++.+.|++.++.++|||||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 158 ~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 158 GGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 3333334443 999999999999999999999999999876678899999999999887777777654
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=2.2e-26 Score=199.81 Aligned_cols=171 Identities=21% Similarity=0.358 Sum_probs=125.9
Q ss_pred CCCCCHHHHHHHHHhcCC--------CCCCeEEEeCCccCCCCCcHHHHHHHHHchhh---CCCcEEEecCCccccchhh
Q 044282 1 DIHGQYSDLLRLFEYGGL--------PPKANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECASINR 69 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~--------~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~---~p~~v~llrGNHE~~~i~~ 69 (275)
|||||+++|.++|+.+++ .+.+.+||+||+||||+++.+|+.+|++|+.. .+.++++|+||||.+.++.
T Consensus 5 DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~~l~~ 84 (208)
T cd07425 5 DLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELMNLCG 84 (208)
T ss_pred CccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHHHHcc
Confidence 999999999999999885 34678999999999999999999999998754 4678999999999998875
Q ss_pred hcCchH--H---HHHH-h-chhhh---hccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCccc
Q 044282 70 IYGFYD--E---CKRR-F-NVRLW---KTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLC 139 (275)
Q Consensus 70 ~~gf~~--e---~~~~-~-~~~~~---~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~ 139 (275)
.+.+.. . .... + ...++ ..+.+|++.+|+...++ +++|||||++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~------------------------ 139 (208)
T cd07425 85 DFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP------------------------ 139 (208)
T ss_pred hhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH------------------------
Confidence 433221 1 1111 0 01122 34578999999998766 79999999844
Q ss_pred ccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecC
Q 044282 140 DLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSA 206 (275)
Q Consensus 140 dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa 206 (275)
+|++.-...... .+ -+...++++++.++.++||+|||+++.|....+++++++|.+.
T Consensus 140 --~w~r~y~~~~~~---~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 --LWYRGYSKETSD---KE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred --HHhhHhhhhhhh---cc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 232211000000 00 0124678899999999999999999988766889999999884
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.93 E-value=2.2e-25 Score=198.04 Aligned_cols=114 Identities=24% Similarity=0.421 Sum_probs=90.6
Q ss_pred CCCCCHHHHHHHHHhcCCC---------CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhc
Q 044282 1 DIHGQYSDLLRLFEYGGLP---------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIY 71 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~---------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~ 71 (275)
|||||++.|+++|+++++. ..+++|||||||||||+|++||.+++++. .+.++++||||||.++++...
T Consensus 8 DIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~~l~~~~ 85 (245)
T PRK13625 8 DIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNKLYRFFL 85 (245)
T ss_pred ECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHHHHHHHh
Confidence 8999999999999998874 45789999999999999999999998874 556899999999998876432
Q ss_pred Cc-------hHHHHHHh-------chhhhhccccccccCCeEEEEc-CeEEEecCCCCCC
Q 044282 72 GF-------YDECKRRF-------NVRLWKTFTDCFNCLPVAALID-EKILCMHGGLSPD 116 (275)
Q Consensus 72 gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPla~iv~-~~il~vHgGi~p~ 116 (275)
+- ..+..+.+ ...+.+.+.+|++.||++..++ ++++|||||+.|.
T Consensus 86 ~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 86 GRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred CCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 20 01111222 1245677889999999998774 5799999999885
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=2.3e-24 Score=188.85 Aligned_cols=111 Identities=24% Similarity=0.395 Sum_probs=87.3
Q ss_pred CCCCCHHHHHHHHHhcCCC--------CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcC
Q 044282 1 DIHGQYSDLLRLFEYGGLP--------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 72 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~--------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~g 72 (275)
|||||++.|+++|+++++. +.+++|||||||||||+|.+||.+|++++ .+.++++|+||||.+++....+
T Consensus 6 DIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~~~~~ 83 (222)
T cd07413 6 DIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIAWHTK 83 (222)
T ss_pred eccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHHhhhC
Confidence 8999999999999999875 46789999999999999999999998875 3458999999999988753221
Q ss_pred ------ch-----------HHHHHHhc--hhhhhccccccccCCeEEEEcCeEEEecCCCC
Q 044282 73 ------FY-----------DECKRRFN--VRLWKTFTDCFNCLPVAALIDEKILCMHGGLS 114 (275)
Q Consensus 73 ------f~-----------~e~~~~~~--~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~ 114 (275)
+. .+..+.+. .+..+.+.+||+.||+.... ++++|||||+.
T Consensus 84 ~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 84 DPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred CcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 00 11122221 24557788999999999765 58999999975
No 23
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.90 E-value=4.2e-24 Score=190.62 Aligned_cols=119 Identities=29% Similarity=0.417 Sum_probs=97.3
Q ss_pred CCCCCHHHHHHHHHhcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCch-----
Q 044282 1 DIHGQYSDLLRLFEYGGLP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----- 74 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~----- 74 (275)
|||||+++|+++|+++++. ..+.++|+||||||||+|+|||.++++++ .++++|+||||.++++..+++.
T Consensus 6 DIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~~~~~~ 81 (257)
T cd07422 6 DIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIKKPKKK 81 (257)
T ss_pred CCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCccccccH
Confidence 9999999999999999986 56889999999999999999999999885 5799999999999887665542
Q ss_pred HHHHHHhchhhhhccccccccCCeEEEEcC-eEEEecCCCCCCCCCHHHHH
Q 044282 75 DECKRRFNVRLWKTFTDCFNCLPVAALIDE-KILCMHGGLSPDLHSLDQIR 124 (275)
Q Consensus 75 ~e~~~~~~~~~~~~~~~~f~~LPla~iv~~-~il~vHgGi~p~~~~l~~i~ 124 (275)
+...+.+.....+++.+|++++|+...+++ ++++|||||+|.+ ++++..
T Consensus 82 ~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~~~ 131 (257)
T cd07422 82 DTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQAL 131 (257)
T ss_pred hHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHHHH
Confidence 222222233445678899999999988765 8999999999987 555433
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.90 E-value=5.2e-23 Score=181.56 Aligned_cols=113 Identities=25% Similarity=0.475 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHHHHhcCCCC----------CCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhh
Q 044282 1 DIHGQYSDLLRLFEYGGLPP----------KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI 70 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~----------~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~ 70 (275)
|||||+.+|+++|+++++.+ .+++||||||||||++|.|||.+|++++. +.++++||||||.++++..
T Consensus 8 DIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE~~l~~~~ 85 (234)
T cd07423 8 DVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHDNKLYRKL 85 (234)
T ss_pred ECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcHHHHHHHh
Confidence 89999999999999998763 35899999999999999999999988763 3479999999999887643
Q ss_pred cC--------chHHHHHHh---chhhhhccccccccCCeEEEEc-CeEEEecCCCCCC
Q 044282 71 YG--------FYDECKRRF---NVRLWKTFTDCFNCLPVAALID-EKILCMHGGLSPD 116 (275)
Q Consensus 71 ~g--------f~~e~~~~~---~~~~~~~~~~~f~~LPla~iv~-~~il~vHgGi~p~ 116 (275)
.+ +.. ....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 86 ~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 86 QGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred cCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 22 221 11222 2356677889999999987775 4799999998764
No 25
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.90 E-value=7.2e-23 Score=184.46 Aligned_cols=113 Identities=24% Similarity=0.401 Sum_probs=92.4
Q ss_pred CCCCCHHHHHHHHHhcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCch-----
Q 044282 1 DIHGQYSDLLRLFEYGGLP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----- 74 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~----- 74 (275)
|||||+.+|+++|+++++. ..+.++||||||||||+|++|+.+++++ +.++++|+||||.+++...++..
T Consensus 8 DIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~~~~~~~ 83 (275)
T PRK00166 8 DIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGIKRNKKK 83 (275)
T ss_pred ccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCCccccch
Confidence 9999999999999999875 4678999999999999999999999876 35799999999999887666643
Q ss_pred HHHHHHhchhhhhccccccccCCeEEEE-cCeEEEecCCCCCCC
Q 044282 75 DECKRRFNVRLWKTFTDCFNCLPVAALI-DEKILCMHGGLSPDL 117 (275)
Q Consensus 75 ~e~~~~~~~~~~~~~~~~f~~LPla~iv-~~~il~vHgGi~p~~ 117 (275)
+.+.+.......+.+.+|++.+|+...+ .+++++||||++|.+
T Consensus 84 ~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 84 DTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW 127 (275)
T ss_pred hHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC
Confidence 1222222334456688999999998776 568999999999987
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.89 E-value=2.4e-23 Score=186.50 Aligned_cols=120 Identities=23% Similarity=0.398 Sum_probs=99.5
Q ss_pred CCCCCHHHHHHHHHhcCCCC-CCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCc-----h
Q 044282 1 DIHGQYSDLLRLFEYGGLPP-KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF-----Y 74 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~-~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf-----~ 74 (275)
|||||+++|+++|+++++++ .++++||||+|||||+|+|||.++.++. .++++|+||||.++++..+|+ .
T Consensus 8 DIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~~~~~~~ 83 (279)
T TIGR00668 8 DLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGISRNKPK 83 (279)
T ss_pred cccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCCCccCch
Confidence 99999999999999999864 6789999999999999999999998874 468899999999999877765 2
Q ss_pred HHHHHHhchhhhhccccccccCCeEEEEc-CeEEEecCCCCCCCCCHHHHHh
Q 044282 75 DECKRRFNVRLWKTFTDCFNCLPVAALID-EKILCMHGGLSPDLHSLDQIRS 125 (275)
Q Consensus 75 ~e~~~~~~~~~~~~~~~~f~~LPla~iv~-~~il~vHgGi~p~~~~l~~i~~ 125 (275)
+.....+...+.+++.+|++.+|+....+ .++++|||||+|.+ ++++...
T Consensus 84 d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~a~~ 134 (279)
T TIGR00668 84 DRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQTAKE 134 (279)
T ss_pred HHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHHHHH
Confidence 34444445567788999999999987654 36999999999988 5655443
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.89 E-value=6.7e-23 Score=179.09 Aligned_cols=170 Identities=21% Similarity=0.240 Sum_probs=110.1
Q ss_pred CCCCCHHHHHHHHHhcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHH--
Q 044282 1 DIHGQYSDLLRLFEYGGLP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDEC-- 77 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~-- 77 (275)
|||||+.+|+++|+.+++. ..++++||||||||||+|.+||.+|.+. ++++|+||||.++++...+-....
T Consensus 24 DIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~~~~~~w~ 97 (218)
T PRK11439 24 DIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALASQQMSLWL 97 (218)
T ss_pred cccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHCCccchhh
Confidence 9999999999999999886 5678999999999999999999998652 588999999999886432110000
Q ss_pred ------HHHhc---hhhhhccccccccCCeEEEEc---CeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCC
Q 044282 78 ------KRRFN---VRLWKTFTDCFNCLPVAALID---EKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSD 145 (275)
Q Consensus 78 ------~~~~~---~~~~~~~~~~f~~LPla~iv~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsd 145 (275)
...+. .+.+..+.+|++.||+...+. +++++||||++... .+.. .+ ....+++|++
T Consensus 98 ~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~--~~~~----~~------~~~~~~~w~r 165 (218)
T PRK11439 98 MNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV--YEWQ----KD------VDLHQVLWSR 165 (218)
T ss_pred hCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc--hhhh----cc------CCccceEEcC
Confidence 01111 123455668999999987653 46999999974321 1111 01 0124678976
Q ss_pred CCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCC
Q 044282 146 PSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNY 209 (275)
Q Consensus 146 p~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y 209 (275)
..... .+. .+ ...+.+.||.||++++.-.. . +..+-|-+.+-|
T Consensus 166 ~~~~~-~~~--~~---------------~~~~~~~vv~GHT~~~~~~~--~-~~~i~IDtGav~ 208 (218)
T PRK11439 166 SRLGE-RQK--GQ---------------GITGADHFWFGHTPLRHRVD--I-GNLHYIDTGAVF 208 (218)
T ss_pred hhhhh-ccc--cc---------------cccCCCEEEECCccCCCccc--c-CCEEEEECCCCC
Confidence 53110 000 00 11255679999999875432 2 235555554433
No 28
>PHA02239 putative protein phosphatase
Probab=99.87 E-value=5.1e-22 Score=175.31 Aligned_cols=164 Identities=23% Similarity=0.311 Sum_probs=111.7
Q ss_pred CCCCCHHHHHHHHHhcCCC--CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCc-----
Q 044282 1 DIHGQYSDLLRLFEYGGLP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF----- 73 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf----- 73 (275)
|||||+..|+++++.+... +.+.+||||||||||++|.+++..++.+. ..+.++++|+||||.+++......
T Consensus 8 DIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~~~~~~~~ 86 (235)
T PHA02239 8 DIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIMENVDRLSI 86 (235)
T ss_pred CCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHhCchhccc
Confidence 9999999999999987543 46789999999999999999999998864 345689999999999876532110
Q ss_pred h---------HHHHHHhc-------------------------------hhhhhccccccccCCeEEEEcCeEEEecCCC
Q 044282 74 Y---------DECKRRFN-------------------------------VRLWKTFTDCFNCLPVAALIDEKILCMHGGL 113 (275)
Q Consensus 74 ~---------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPla~iv~~~il~vHgGi 113 (275)
. .+....|+ ...+..+..|++.||+... .++++|||||+
T Consensus 87 ~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~ifVHAGi 165 (235)
T PHA02239 87 YDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKYIFSHSGG 165 (235)
T ss_pred chHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCEEEEeCCC
Confidence 0 01112221 0122445568999999866 45899999999
Q ss_pred CCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceE
Q 044282 114 SPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYE 193 (275)
Q Consensus 114 ~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 193 (275)
.|... +++. ...+++|.+. . .+.. .=+.||.|||++.++..
T Consensus 166 ~p~~~-~~~q-------------~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHTp~~~~~~ 206 (235)
T PHA02239 166 VSWKP-VEEQ-------------TIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHTPTDSGEV 206 (235)
T ss_pred CCCCC-hhhC-------------CHhHeEEecc-c-----CCCC-------------------CCcEEEECCCCCCCCcc
Confidence 88643 3321 2368999986 2 1110 12368999999876543
Q ss_pred EecCCeEEEEecC
Q 044282 194 FFANRQLVTIFSA 206 (275)
Q Consensus 194 ~~~~~~~itifSa 206 (275)
... ++.|.|-..
T Consensus 207 ~~~-~~~I~IDtG 218 (235)
T PHA02239 207 EIN-GDMLMCDVG 218 (235)
T ss_pred ccc-CCEEEeecC
Confidence 322 334555443
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.87 E-value=2e-21 Score=174.56 Aligned_cols=68 Identities=37% Similarity=0.522 Sum_probs=59.1
Q ss_pred CCCCCHHHHHHHHHhcCCC------CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCC-cEEEecCCccccchh
Q 044282 1 DIHGQYSDLLRLFEYGGLP------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECASIN 68 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~-~v~llrGNHE~~~i~ 68 (275)
|||||++.|+++|+.+... ..+.+|||||||||||+|.+|+.+|++++..+|. ++++|+||||.+++.
T Consensus 9 DIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l~ 83 (304)
T cd07421 9 DIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFAA 83 (304)
T ss_pred eccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHHh
Confidence 8999999999999875422 2457999999999999999999999999888876 689999999988764
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.86 E-value=2.2e-21 Score=168.03 Aligned_cols=162 Identities=25% Similarity=0.334 Sum_probs=109.8
Q ss_pred CCCCCHHHHHHHHHhcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcC--chHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG--FYDEC 77 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~g--f~~e~ 77 (275)
|||||+.+|+++++.+++. ..+.++|+|||||||+++.|++.+|.. .++++|+||||.+.+....+ ...+.
T Consensus 8 DiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~~~~~~~~ 81 (207)
T cd07424 8 DIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRAEPLDAVR 81 (207)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhCCCcchhH
Confidence 9999999999999998875 467789999999999999999998865 36899999999998876543 11122
Q ss_pred HHHhc---------hhhhhccccccccCCeEEEEc---CeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCC
Q 044282 78 KRRFN---------VRLWKTFTDCFNCLPVAALID---EKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSD 145 (275)
Q Consensus 78 ~~~~~---------~~~~~~~~~~f~~LPla~iv~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsd 145 (275)
....+ .++++.+.+||+.||+...++ .++++||||+++.. ..+.+.. +........+++|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~-~~~~~~~-----~~~~~~~~~~~~w~~ 155 (207)
T cd07424 82 WLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD-WSDGVGA-----VTLRPEDIEELLWSR 155 (207)
T ss_pred HHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch-hhhhhhc-----cccCcccceeeeecc
Confidence 11111 124556778999999998774 47999999986532 1111110 111223456788987
Q ss_pred CCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceE
Q 044282 146 PSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYE 193 (275)
Q Consensus 146 p~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 193 (275)
+...... +....+.+.||.||++++..+.
T Consensus 156 ~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 156 TRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred chhhhcC-------------------ccccCCCCEEEECCCCCCcceE
Confidence 6421100 0011145789999999876443
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.83 E-value=1.7e-20 Score=163.93 Aligned_cols=108 Identities=25% Similarity=0.286 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHHHHhcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHH--
Q 044282 1 DIHGQYSDLLRLFEYGGLP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDEC-- 77 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~-- 77 (275)
|||||+++|+++|+.+.+. ..+.++||||||||||+|.+|+.+|.+ .+++.||||||.+++.....-....
T Consensus 22 DiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~~~~~~~~ 95 (218)
T PRK09968 22 DIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFETGDGNMWL 95 (218)
T ss_pred eccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhcCChhHHH
Confidence 8999999999999998865 457888999999999999999998854 3689999999998886432100000
Q ss_pred ------HHHhch---hhhhccccccccCCeEEEEc---CeEEEecCCCC
Q 044282 78 ------KRRFNV---RLWKTFTDCFNCLPVAALID---EKILCMHGGLS 114 (275)
Q Consensus 78 ------~~~~~~---~~~~~~~~~f~~LPla~iv~---~~il~vHgGi~ 114 (275)
...+.. ........|++.||+...+. .++++||||++
T Consensus 96 ~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 96 ASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 001110 12233456899999987663 46999999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.25 E-value=4e-11 Score=96.24 Aligned_cols=152 Identities=25% Similarity=0.290 Sum_probs=94.1
Q ss_pred CCCCCHHHH----HHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHH--HHchhhCCCcEEEecCCccccchhhhcCch
Q 044282 1 DIHGQYSDL----LRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASINRIYGFY 74 (275)
Q Consensus 1 DIHG~~~~L----~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll--~~lk~~~p~~v~llrGNHE~~~i~~~~gf~ 74 (275)
|+|+..... ..+.+.....+.+.+|++||++|++..+.+..... .......+..+++++||||.......+...
T Consensus 8 D~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~ 87 (200)
T PF00149_consen 8 DLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGNSFYGFY 87 (200)
T ss_dssp BBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHHHHHHHH
T ss_pred CCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceeccccccc
Confidence 899999987 34444444456677889999999999988776654 445556778999999999998765432222
Q ss_pred HHHHHHh----------------------------------chhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCH
Q 044282 75 DECKRRF----------------------------------NVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSL 120 (275)
Q Consensus 75 ~e~~~~~----------------------------------~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l 120 (275)
....... ..........+.............++++|.++.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~ 167 (200)
T PF00149_consen 88 DYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDS 167 (200)
T ss_dssp HHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSSTTSSST
T ss_pred cccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCCCccccc
Confidence 1111100 000011111222222233334557899999877633111
Q ss_pred HHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeee
Q 044282 121 DQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVV 188 (275)
Q Consensus 121 ~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~ 188 (275)
... .....+.+.+..++++.++++++.||++.
T Consensus 168 ~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 168 SSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp HHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred ccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 110 12345677899999999999999999875
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.17 E-value=1.4e-09 Score=89.42 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=43.9
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
|+||+...+.++++.+.. .+.++++||++++++.+. + .....+++++||||...
T Consensus 7 D~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~ 60 (155)
T cd00841 7 DTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEV 60 (155)
T ss_pred cCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcC
Confidence 899999999999998654 678899999999998765 1 12346999999999853
No 34
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.12 E-value=1.5e-10 Score=92.66 Aligned_cols=144 Identities=40% Similarity=0.661 Sum_probs=117.0
Q ss_pred hhhhcCchHHHHHHhchh-hhhc---cccccccCCeEEEEcC-eEEEecCCCCCCC-CCHHHHHhcCCCC--CCCCCCcc
Q 044282 67 INRIYGFYDECKRRFNVR-LWKT---FTDCFNCLPVAALIDE-KILCMHGGLSPDL-HSLDQIRSLQRPT--DVPDTGLL 138 (275)
Q Consensus 67 i~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPla~iv~~-~il~vHgGi~p~~-~~l~~i~~i~rp~--~~~~~~~~ 138 (275)
+...+++.+++...+... .|.. ..++|+.||+.+++++ .++|.|++++|.+ ..+++++.+.+.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 445567777766666544 5666 9999999999999888 9999999999965 5777777777665 56667777
Q ss_pred cccccCCCCCC-CCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCC
Q 044282 139 CDLLWSDPSKD-IQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCG 211 (275)
Q Consensus 139 ~dllWsdp~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~ 211 (275)
.+.+|+++... ...|.++++|....+ ++....|+..+..+.+.++|+.+..++.....+..+|.||+++||.
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~~ 155 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEecccccC
Confidence 77799998763 577888899988887 7788889988888889999999999998887768999999999973
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.97 E-value=1e-08 Score=83.57 Aligned_cols=145 Identities=21% Similarity=0.307 Sum_probs=85.5
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|+|++...+.++++.+ ...+.++++||++|+ .+++..+..+ .++.++||||.........
T Consensus 8 D~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~-------- 67 (156)
T PF12850_consen 8 DLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNEND-------- 67 (156)
T ss_dssp --TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEEC--------
T ss_pred CCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhh--------
Confidence 8999999999999988 346778889999993 7777766444 6999999999654322110
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCC
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGV 160 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~ 160 (275)
.+. +...+.+ .....+++++||....
T Consensus 68 --~~~------~~~~~~~-~~~~~~i~~~H~~~~~--------------------------------------------- 93 (156)
T PF12850_consen 68 --EEY------LLDALRL-TIDGFKILLSHGHPYD--------------------------------------------- 93 (156)
T ss_dssp --TCS------SHSEEEE-EETTEEEEEESSTSSS---------------------------------------------
T ss_pred --ccc------cccceee-eecCCeEEEECCCCcc---------------------------------------------
Confidence 000 1111111 1124579999996543
Q ss_pred ceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEc
Q 044282 161 SFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVD 223 (275)
Q Consensus 161 ~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~ 223 (275)
...+.+.+.+.+...++++++.||...+.-.+ ..+..+++.-|....- .+...+++.++
T Consensus 94 -~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 94 -VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp -STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred -cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 00233456677789999999999999855443 3344455555543221 22255555554
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.96 E-value=1.6e-08 Score=83.73 Aligned_cols=56 Identities=20% Similarity=0.162 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHhcCCC-CCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQYSDLLRLFEYGGLP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|+||++.+++.+++..... ..+.++++||++ +.+++.++..+. ..++.++||||..
T Consensus 8 D~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 8 DTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred cccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 8999998887777665554 567788999999 467777765542 2599999999984
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.84 E-value=1.4e-08 Score=81.81 Aligned_cols=112 Identities=24% Similarity=0.284 Sum_probs=74.1
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcH--HHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 78 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~ 78 (275)
|+||++. .....+.+.+|++||+++++..+- +.+.++..++ .+ .++++.||||....
T Consensus 7 D~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----------- 65 (135)
T cd07379 7 DTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----------- 65 (135)
T ss_pred CCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----------
Confidence 8999987 122345577888999999986532 3444444432 22 36789999996421
Q ss_pred HHhchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCC
Q 044282 79 RRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDR 158 (275)
Q Consensus 79 ~~~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~r 158 (275)
.-+.+++++||.+.+.. +..+.
T Consensus 66 ----------------------~~~~~ilv~H~~p~~~~----------------------~~~~~-------------- 87 (135)
T cd07379 66 ----------------------PEDTDILVTHGPPYGHL----------------------DLVSS-------------- 87 (135)
T ss_pred ----------------------CCCCEEEEECCCCCcCc----------------------ccccc--------------
Confidence 11447899999532200 00000
Q ss_pred CCceeeChHHHHHHHHhCCCceEEEeeeeeccceE
Q 044282 159 GVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYE 193 (275)
Q Consensus 159 g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 193 (275)
....|.+.+.+++++.+.+++|.||+..+.|++
T Consensus 88 --~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123567788899999999999999999998876
No 38
>PRK09453 phosphodiesterase; Provisional
Probab=98.81 E-value=1.8e-08 Score=85.42 Aligned_cols=62 Identities=24% Similarity=0.346 Sum_probs=49.4
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCC--------cHHHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~--------s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
|+||++.+++++++.+...+.+.++++||++|+|+. +.+++.++..+ +..+++++||||...
T Consensus 8 D~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 8 DTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred eccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 899999999999988755566789999999999873 45666666443 246999999999754
No 39
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.65 E-value=2.7e-07 Score=71.60 Aligned_cols=113 Identities=28% Similarity=0.383 Sum_probs=79.7
Q ss_pred CCCCCHHHHHHHH--HhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHH
Q 044282 1 DIHGQYSDLLRLF--EYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 78 (275)
Q Consensus 1 DIHG~~~~L~~ll--~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~ 78 (275)
|+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 5 D~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------- 69 (131)
T cd00838 5 DIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD--------------- 69 (131)
T ss_pred cccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce---------------
Confidence 8999998887764 33333455778899999999998877665433333445668999999999
Q ss_pred HHhchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCC
Q 044282 79 RRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDR 158 (275)
Q Consensus 79 ~~~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~r 158 (275)
++++|..+.+...... +.
T Consensus 70 ---------------------------i~~~H~~~~~~~~~~~---------------------~~-------------- 87 (131)
T cd00838 70 ---------------------------ILLTHGPPYDPLDELS---------------------PD-------------- 87 (131)
T ss_pred ---------------------------EEEeccCCCCCchhhc---------------------cc--------------
Confidence 8899998755221000 00
Q ss_pred CCceeeChHHHHHHHHhCCCceEEEeeeeeccceE
Q 044282 159 GVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYE 193 (275)
Q Consensus 159 g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 193 (275)
.......+...+...+.+++|.||+.....+.
T Consensus 88 ---~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 ---EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ---chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00045677888899999999999999876554
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.64 E-value=6.5e-07 Score=78.65 Aligned_cols=64 Identities=11% Similarity=0.183 Sum_probs=50.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
||||++..++++++.+.-...+.+|++||++++|+..-++..++..+.. .+..+++++||||..
T Consensus 12 DiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 12 NPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred ecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 8999999999999876444567889999999999766666666655532 234699999999985
No 41
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.59 E-value=2.4e-07 Score=76.98 Aligned_cols=62 Identities=27% Similarity=0.261 Sum_probs=43.2
Q ss_pred CCCCCHHHHHHHHH-hcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQYSDLLRLFE-YGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~~~~L~~ll~-~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|||+....+...+. .......+.++++||+++++..+..+. ++.. ...+..+++++||||..
T Consensus 6 DlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 6 DLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred cccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 89999887766552 233344567888999999987765543 2222 23455799999999986
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.58 E-value=3.5e-06 Score=71.44 Aligned_cols=53 Identities=19% Similarity=0.278 Sum_probs=37.1
Q ss_pred CCC-CCHH-----HHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIH-GQYS-----DLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIH-G~~~-----~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|.| |... .+.++++. ...+.++.+||+++ .+++.++..++ ..++.++||||..
T Consensus 7 DtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 7 DLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred ecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 789 5543 35555543 34567889999987 77777775542 2599999999974
No 43
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.55 E-value=4.4e-07 Score=80.25 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=40.6
Q ss_pred CCCCCHHHHH-HHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 1 DIHGQYSDLL-RLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 1 DIHG~~~~L~-~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
||||++.... +.++.. ..+.+|++||+++. +.+++..+..+ +..++.++||||.+..
T Consensus 8 DiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 8 DVHGQWDLEDIKALHLL---QPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred cCCCCchHHHHHHHhcc---CCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 8999987643 344433 34678899999864 56777766554 2358999999998653
No 44
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.55 E-value=7.7e-07 Score=74.67 Aligned_cols=60 Identities=25% Similarity=0.277 Sum_probs=41.9
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCc-HHHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s-~evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
||||++..+.. ..+...+.+.+|++||++++|..+ .+.+..+.. .+..++.+.||||...
T Consensus 6 D~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 6 DIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred ecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 89999998876 222333457788999999999763 333333322 2446999999999754
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.37 E-value=4.7e-06 Score=66.84 Aligned_cols=103 Identities=19% Similarity=0.214 Sum_probs=70.8
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 5 DtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D----------------- 56 (129)
T cd07403 5 DTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD----------------- 56 (129)
T ss_pred cccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-----------------
Confidence 899998877776665 35567899999974 3445555444 1234899999999
Q ss_pred hchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCC
Q 044282 81 FNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGV 160 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~ 160 (275)
-+++++|+-+.+ .. +.+.
T Consensus 57 -----------------------~~Ilv~H~pp~~-~~------------------------~~~~-------------- 74 (129)
T cd07403 57 -----------------------VDILLTHAPPAG-IG------------------------DGED-------------- 74 (129)
T ss_pred -----------------------cCEEEECCCCCc-Cc------------------------Cccc--------------
Confidence 478999983211 00 0000
Q ss_pred ceeeChHHHHHHHHhCCCceEEEeeeeeccceE
Q 044282 161 SFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYE 193 (275)
Q Consensus 161 ~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 193 (275)
...-|.+++.+++++.+.++++.||...+..+.
T Consensus 75 ~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012355778889999999999999999877665
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.35 E-value=1.3e-05 Score=70.98 Aligned_cols=198 Identities=17% Similarity=0.201 Sum_probs=97.2
Q ss_pred CCCCCH------HHHHHHHHhcCCCCCCeEEEeCCccCC--C-----CCcHHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 1 DIHGQY------SDLLRLFEYGGLPPKANYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 1 DIHG~~------~~L~~ll~~~g~~~~~~~vfLGD~VDR--G-----~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
|+|... ..|.+.|+.. ....+.++++||++|. | +...+++.+|..++. .+..++++.||||....
T Consensus 8 DlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~GNHD~~~~ 85 (241)
T PRK05340 8 DLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHGNRDFLLG 85 (241)
T ss_pred ecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeCCCchhhh
Confidence 889442 2355555432 1245678889999985 2 234566666666642 33579999999997432
Q ss_pred hhhcCchHHHHHHhchhhhhccccccccCCeEEEEc-CeEEEecCCCCCCCC-CHHHHHhcCC-CCCCCCCCcccccccC
Q 044282 68 NRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALID-EKILCMHGGLSPDLH-SLDQIRSLQR-PTDVPDTGLLCDLLWS 144 (275)
Q Consensus 68 ~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~iv~-~~il~vHgGi~p~~~-~l~~i~~i~r-p~~~~~~~~~~dllWs 144 (275)
. ...+..+. .++.. |....++ .+++++||-..+... .....+++-| |.- ..-+. .
T Consensus 86 ~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~------~~~~~-~ 143 (241)
T PRK05340 86 K-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWL------QWLFL-A 143 (241)
T ss_pred H-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHH------HHHHH-h
Confidence 1 11111221 11111 2322334 469999998654211 1111222211 100 00000 0
Q ss_pred CCCCC----CCCcc-----cCC-CC-CceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCC
Q 044282 145 DPSKD----IQGWG-----MND-RG-VSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEF 213 (275)
Q Consensus 145 dp~~~----~~~~~-----~~~-rg-~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~ 213 (275)
-|... ...+. .+. +. .-....++++.+.+++.+++.+|.||+..+.-.....++.-++-.+-++.
T Consensus 144 ~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw---- 219 (241)
T PRK05340 144 LPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW---- 219 (241)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC----
Confidence 00000 00000 000 01 11223457788889999999999999998754443333311111111222
Q ss_pred CCcEEEEEEcCCC
Q 044282 214 DNAGAMMSVDETL 226 (275)
Q Consensus 214 ~N~ga~l~i~~~~ 226 (275)
...+.+++++.+.
T Consensus 220 ~~~~~~~~~~~~~ 232 (241)
T PRK05340 220 HEQGSVLKVDADG 232 (241)
T ss_pred CCCCeEEEEECCc
Confidence 2347788888764
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.24 E-value=5.8e-06 Score=72.75 Aligned_cols=201 Identities=14% Similarity=0.148 Sum_probs=95.8
Q ss_pred CCCCCH------HHHHHHHHhcCCCCCCeEEEeCCccCCC-----CC--cHHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 1 DIHGQY------SDLLRLFEYGGLPPKANYLFLGDYVDRG-----KQ--SLETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 1 DIHG~~------~~L~~ll~~~g~~~~~~~vfLGD~VDRG-----~~--s~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
|+|... ..+.+.|.... ...+.++++||++|.. +. ..++..++..|+. .+..++++.||||...-
T Consensus 6 DlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNHD~~~~ 83 (231)
T TIGR01854 6 DLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNRDFLIG 83 (231)
T ss_pred ecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCCchhhh
Confidence 889542 23444444322 1456788899999952 11 1344555555542 34579999999997521
Q ss_pred hhhcCchHHHHHHhchhhhhccccccccCCeEEEE-cCeEEEecCCCCCC-CCCHHHHHhcC-CCCC------CCC--CC
Q 044282 68 NRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALI-DEKILCMHGGLSPD-LHSLDQIRSLQ-RPTD------VPD--TG 136 (275)
Q Consensus 68 ~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~iv-~~~il~vHgGi~p~-~~~l~~i~~i~-rp~~------~~~--~~ 136 (275)
. ...+..+. .++.. +....+ +.+++++||-.-.. .....-.+++- .|.- .+. ..
T Consensus 84 ~-------~~~~~~gi-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~~~~r~ 148 (231)
T TIGR01854 84 K-------RFAREAGM-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLPLAVRV 148 (231)
T ss_pred H-------HHHHHCCC-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCCHHHHH
Confidence 1 01111111 11211 222222 45799999975431 11111122221 1100 000 00
Q ss_pred cccccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCc
Q 044282 137 LLCDLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNA 216 (275)
Q Consensus 137 ~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ 216 (275)
.+...+++..... .. ...-.-....+..+++.++..+++++|.||+..+.-..+..++.-.+-.+-++. ...
T Consensus 149 ~l~~~~~~~s~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW----~~~ 220 (231)
T TIGR01854 149 KLARKIRAESRAD-KQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW----YRQ 220 (231)
T ss_pred HHHHHHHHHHHHh-cC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC----ccC
Confidence 1111222211100 00 000011233567788889999999999999998765544333321232333333 224
Q ss_pred EEEEEEcCCC
Q 044282 217 GAMMSVDETL 226 (275)
Q Consensus 217 ga~l~i~~~~ 226 (275)
+.++++++++
T Consensus 221 ~~~~~~~~~g 230 (231)
T TIGR01854 221 GSILRVDADG 230 (231)
T ss_pred CeEEEEcCCC
Confidence 6677777653
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.24 E-value=1.9e-05 Score=63.73 Aligned_cols=102 Identities=24% Similarity=0.255 Sum_probs=65.7
Q ss_pred HHHhcCCCCCCeEEEeCCccCCCCCc-H-HHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHHhchhhhhcc
Q 044282 12 LFEYGGLPPKANYLFLGDYVDRGKQS-L-ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTF 89 (275)
Q Consensus 12 ll~~~g~~~~~~~vfLGD~VDRG~~s-~-evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~ 89 (275)
+++...-...+.++++||+++.|... . +...++..++... ..+++++||||.
T Consensus 27 ~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~------------------------- 80 (144)
T cd07400 27 LLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV------------------------- 80 (144)
T ss_pred HHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE-------------------------
Confidence 44444444567788999999998752 1 2223333333211 369999999998
Q ss_pred ccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCCceeeChHHH
Q 044282 90 TDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADKV 169 (275)
Q Consensus 90 ~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~ 169 (275)
++++|.-+.+.... +... .. +.+.+
T Consensus 81 ----------------iv~~Hhp~~~~~~~---------------------------------~~~~-----~~-~~~~~ 105 (144)
T cd07400 81 ----------------IVVLHHPLVPPPGS---------------------------------GRER-----LL-DAGDA 105 (144)
T ss_pred ----------------EEEecCCCCCCCcc---------------------------------cccc-----CC-CHHHH
Confidence 88899865431100 0000 00 45678
Q ss_pred HHHHHhCCCceEEEeeeeeccceEE
Q 044282 170 TDFLQKHDLDLVCRAHQVVEDGYEF 194 (275)
Q Consensus 170 ~~fl~~~~~~~iirgH~~~~~G~~~ 194 (275)
.+++++.++++++.||...+..+..
T Consensus 106 ~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 106 LKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred HHHHHHcCCCEEEECCCCCcCeeec
Confidence 8899999999999999998765543
No 49
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.17 E-value=9.6e-06 Score=71.60 Aligned_cols=62 Identities=23% Similarity=0.160 Sum_probs=43.3
Q ss_pred CCCCCH------HHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQY------SDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~~------~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|+|+++ ..|.++++.+.-...+-+|++||++++.+.+.+.+..+..+ .+..++++.||||..
T Consensus 7 DlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 7 DLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred eecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 788653 23556666554445677889999999877666666555442 345699999999975
No 50
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.08 E-value=0.00014 Score=63.29 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=38.4
Q ss_pred ChHHHHHHHHhC-CCceEEEeeeeeccceEEe-----cCCeEEEEecCCCCCCCCCC-cEEEEEEcCCC-ceEEEEEcc
Q 044282 165 GADKVTDFLQKH-DLDLVCRAHQVVEDGYEFF-----ANRQLVTIFSAPNYCGEFDN-AGAMMSVDETL-MCSFQILKP 235 (275)
Q Consensus 165 g~~~~~~fl~~~-~~~~iirgH~~~~~G~~~~-----~~~~~itifSa~~y~~~~~N-~ga~l~i~~~~-~~~~~~~~p 235 (275)
+.+.+.+.++++ ++++++.||..... .... .++.+..+.+.........| .=.++.++++. .+.+..+.|
T Consensus 136 ~~~~~~~ll~~~~~V~~v~~GH~H~~~-~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 136 GQQIWDKLVKKNDNVFMVLSGHVHGAG-RTTLVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred HHHHHHHHHhCCCCEEEEEccccCCCc-eEEEcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCEEEEEeCCC
Confidence 445677888887 89999999988642 2222 23445555443211111111 11456666664 555555554
No 51
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.99 E-value=0.00047 Score=62.15 Aligned_cols=58 Identities=14% Similarity=0.064 Sum_probs=36.7
Q ss_pred HHHHHHHHHhcCC--CCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 6 YSDLLRLFEYGGL--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 6 ~~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
...|.++++.+.- +..+-+|+.||++|.|. .+-+..+++.-...+..++++.||||..
T Consensus 39 ~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~GNHD~~ 98 (275)
T PRK11148 39 WESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLPGNHDFQ 98 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeCCCCCCh
Confidence 4567778876532 23466888999999874 2222222222122345699999999984
No 52
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.92 E-value=0.00045 Score=58.27 Aligned_cols=153 Identities=17% Similarity=0.147 Sum_probs=90.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR 80 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~ 80 (275)
|.||...+..+.++.......+-+|.+||++..... ..+.. ....+++.++||.|.....
T Consensus 9 DtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~--~~l~~------~~~~~i~~V~GN~D~~~~~------------ 68 (172)
T COG0622 9 DTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL--DALEG------GLAAKLIAVRGNCDGEVDQ------------ 68 (172)
T ss_pred ccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch--HHhhc------ccccceEEEEccCCCcccc------------
Confidence 899999866666666555666778889999986543 11111 0235799999999986432
Q ss_pred hchhhhhccccccccCCeE--EEEc-CeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCC
Q 044282 81 FNVRLWKTFTDCFNCLPVA--ALID-EKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMND 157 (275)
Q Consensus 81 ~~~~~~~~~~~~f~~LPla--~iv~-~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~ 157 (275)
..+|-. ..++ -+++++||.... .
T Consensus 69 -------------~~~p~~~~~~~~g~ki~l~HGh~~~-~---------------------------------------- 94 (172)
T COG0622 69 -------------EELPEELVLEVGGVKIFLTHGHLYF-V---------------------------------------- 94 (172)
T ss_pred -------------ccCChhHeEEECCEEEEEECCCccc-c----------------------------------------
Confidence 122222 1233 489999996432 0
Q ss_pred CCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCC-CceEEEEEcc
Q 044282 158 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDET-LMCSFQILKP 235 (275)
Q Consensus 158 rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~-~~~~~~~~~p 235 (275)
......++.+-+..+.+.+|.||+..+.=.+. .+-.++-=-|.+.+-+ .+..+++.++.+ .++....+..
T Consensus 95 -----~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~-~~i~~vNPGS~s~pr~--~~~~sy~il~~~~~~~~~~~~~~ 165 (172)
T COG0622 95 -----KTDLSLLEYLAKELGADVLIFGHTHKPVAEKV-GGILLVNPGSVSGPRG--GNPASYAILDVDNLEVEVLFLER 165 (172)
T ss_pred -----ccCHHHHHHHHHhcCCCEEEECCCCcccEEEE-CCEEEEcCCCcCCCCC--CCCcEEEEEEcCCCEEEEEEeec
Confidence 01234566777888999999999998643322 1211111134444433 345456666554 4555554443
No 53
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.88 E-value=0.00057 Score=60.92 Aligned_cols=58 Identities=19% Similarity=0.172 Sum_probs=35.1
Q ss_pred HHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcE-EEEEEcCCC
Q 044282 167 DKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAG-AMMSVDETL 226 (275)
Q Consensus 167 ~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~g-a~l~i~~~~ 226 (275)
+.+.+.+++.++++++.||........+ ++--..+-+++.++...++.| .++.|+++.
T Consensus 196 ~~l~~ll~~~~V~~v~~GH~H~~~~~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 196 KPLLDKFKKAGVKAVFSGHYHRNAGGRY--GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred HHHHHHHHhcCceEEEECccccCCceEE--CCEEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 4577788889999999999998765443 332122223344433333444 467776553
No 54
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=97.79 E-value=4.8e-05 Score=68.63 Aligned_cols=63 Identities=22% Similarity=0.098 Sum_probs=43.7
Q ss_pred CCCCC----HHHHHHHHHhcCCCCCCeEEEeCCccCCC-C-CcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQ----YSDLLRLFEYGGLPPKANYLFLGDYVDRG-K-QSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~----~~~L~~ll~~~g~~~~~~~vfLGD~VDRG-~-~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|||.. ...+.++++.+.-...+-++++||++|++ + ..-++...|..|+... .++.+.||||..
T Consensus 57 DlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~~ 125 (271)
T PRK11340 57 DLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDRP 125 (271)
T ss_pred ccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCcc
Confidence 89976 55577777765545567788999999954 2 3334555565555433 599999999975
No 55
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.75 E-value=0.0022 Score=62.91 Aligned_cols=85 Identities=19% Similarity=0.241 Sum_probs=46.0
Q ss_pred CCeEEEeCCccCC-CCCc---------------HHHHHHHHHchhhCCCcEEEecCCccccchhhhc-CchHHHHHHhch
Q 044282 21 KANYLFLGDYVDR-GKQS---------------LETICLLLAYKIKYPENFFLLRGNHECASINRIY-GFYDECKRRFNV 83 (275)
Q Consensus 21 ~~~~vfLGD~VDR-G~~s---------------~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~-gf~~e~~~~~~~ 83 (275)
.+.+|++||++|. |... .++..+|..+. ..-.|++++||||........ .+.......+.
T Consensus 285 ~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~- 361 (504)
T PRK04036 285 VKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEYLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFP- 361 (504)
T ss_pred CCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHHHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcC-
Confidence 3678999999995 3211 13344444442 334799999999986432211 12222211111
Q ss_pred hhhhccccccccCCeEEEEcC-eEEEecCC
Q 044282 84 RLWKTFTDCFNCLPVAALIDE-KILCMHGG 112 (275)
Q Consensus 84 ~~~~~~~~~f~~LPla~iv~~-~il~vHgG 112 (275)
..-..++.. |....+++ +++++||-
T Consensus 362 ---~~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 362 ---EHNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred ---cCCeEEecC-CeEEEECCEEEEEECCC
Confidence 112344444 65544554 68999995
No 56
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.72 E-value=0.00058 Score=58.40 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=30.9
Q ss_pred CCCeEEEeCCccCCCCCc---HHHHHHHHHchhhCCCcEEEecCCcc
Q 044282 20 PKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRGNHE 63 (275)
Q Consensus 20 ~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~~v~llrGNHE 63 (275)
..+.+|++||+++.+... .+.+..++.......-.++++.||||
T Consensus 41 ~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 41 KPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred CCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 446788999999977653 55555554432333456899999999
No 57
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.72 E-value=5.6e-05 Score=65.40 Aligned_cols=64 Identities=30% Similarity=0.279 Sum_probs=45.7
Q ss_pred CCCCCHH----HHHHHHHhcCCCCCCeEEEeCCccCCCCCcH-HHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 1 DIHGQYS----DLLRLFEYGGLPPKANYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 1 DIHG~~~----~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
|+|.... .+.++++.+.-...+.++++||++|.+.... ++..++..++ .+..++++.||||...
T Consensus 9 DlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 9 DLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred ecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 8898643 6677777655444567888999999988765 4555554443 3456999999999864
No 58
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.70 E-value=0.0012 Score=59.31 Aligned_cols=62 Identities=19% Similarity=0.138 Sum_probs=39.6
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeCCccCCCCC-cHHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 6 YSDLLRLFEYGGLPPKANYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 6 ~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~-s~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
...|.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.+.||||....
T Consensus 26 ~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~GNHD~~~~ 88 (267)
T cd07396 26 LEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLGNHDLYNP 88 (267)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecCccccccc
Confidence 4566777776654445678899999998873 2233333333222223469999999998643
No 59
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.59 E-value=0.00086 Score=59.95 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=22.7
Q ss_pred HHHHHHhCCCceEEEeeeeeccceEEe
Q 044282 169 VTDFLQKHDLDLVCRAHQVVEDGYEFF 195 (275)
Q Consensus 169 ~~~fl~~~~~~~iirgH~~~~~G~~~~ 195 (275)
+.+.+++.++++++.||.......+..
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceee
Confidence 677888899999999999998875544
No 60
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.58 E-value=0.0017 Score=57.05 Aligned_cols=45 Identities=4% Similarity=-0.057 Sum_probs=30.5
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceE---EecCCeEEEEecCCCCCC
Q 044282 165 GADKVTDFLQKHDLDLVCRAHQVVEDGYE---FFANRQLVTIFSAPNYCG 211 (275)
Q Consensus 165 g~~~~~~fl~~~~~~~iirgH~~~~~G~~---~~~~~~~itifSa~~y~~ 211 (275)
+...+.+.+++.++++++.||+....-.. ...++ |+.+++|+=|-
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~~ 228 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADYL 228 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchhc
Confidence 44567788888999999999999754323 12344 56666665543
No 61
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.55 E-value=0.012 Score=51.48 Aligned_cols=197 Identities=19% Similarity=0.201 Sum_probs=109.9
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCcc--CCCCCcHHHHHH-HHHchhhCCCcEEEecCCccccchhhhcCchHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASINRIYGFYDEC 77 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~V--DRG~~s~evl~l-l~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~ 77 (275)
|+||.+..+.++++.+.....+-+++.||+. +.|+.-.-.-.. +..++ .....++.++||-|...+-. .
T Consensus 11 DlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~-------~ 82 (226)
T COG2129 11 DLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID-------V 82 (226)
T ss_pred ccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH-------H
Confidence 8999999999999988766777888999999 888753222210 22332 23457999999988765432 1
Q ss_pred HHHhchhhhhccccccccCCeEEEEcCeEEEecCCCCCCC-C-----CHHHHHhcCCC-CCCCCCCcccccccCCCCCCC
Q 044282 78 KRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDL-H-----SLDQIRSLQRP-TDVPDTGLLCDLLWSDPSKDI 150 (275)
Q Consensus 78 ~~~~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~-~-----~l~~i~~i~rp-~~~~~~~~~~dllWsdp~~~~ 150 (275)
.+..+..+.. -...+++=-||-=||..|.. . +-++|...-+. .+... ....=++..-|....
T Consensus 83 l~~~~~~v~~----------~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~~Il~~HaPP~gt 151 (226)
T COG2129 83 LKNAGVNVHG----------RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-NPVNILLTHAPPYGT 151 (226)
T ss_pred HHhccccccc----------ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc-CcceEEEecCCCCCc
Confidence 1112211111 11122322333346655432 1 23333322111 11000 000012222332221
Q ss_pred CCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCC
Q 044282 151 QGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDET 225 (275)
Q Consensus 151 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~ 225 (275)
..- ++-| -..-|..+++++.++.+-.+.++||=.-..|++.-.+ ||+-.|.-.+ .-..|++.+++.
T Consensus 152 ~~d--~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~~~ 217 (226)
T COG2129 152 LLD--TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELEKE 217 (226)
T ss_pred ccc--CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEecCc
Confidence 111 1222 1345899999999999999999999888788876433 5555554422 356778888776
No 62
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.51 E-value=0.001 Score=55.96 Aligned_cols=48 Identities=23% Similarity=0.277 Sum_probs=30.6
Q ss_pred CCCCeEEEeCCccCCCCCcH--H---HHHHHHHchh-hC----CCcEEEecCCccccc
Q 044282 19 PPKANYLFLGDYVDRGKQSL--E---TICLLLAYKI-KY----PENFFLLRGNHECAS 66 (275)
Q Consensus 19 ~~~~~~vfLGD~VDRG~~s~--e---vl~ll~~lk~-~~----p~~v~llrGNHE~~~ 66 (275)
-..+.+|++||++|.+.... + .+..+..+.. .. .-.++.+.||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34567899999999987532 2 2222222211 11 456999999999964
No 63
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.38 E-value=0.0086 Score=53.30 Aligned_cols=63 Identities=21% Similarity=0.291 Sum_probs=42.6
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeCCccCCCCC-cHHHHHHHHHchhhCCCcEEEecCCccccchhh
Q 044282 6 YSDLLRLFEYGGLPPKANYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRGNHECASINR 69 (275)
Q Consensus 6 ~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~-s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~ 69 (275)
...+..+++.+...+.+-+|+.||+.+.|.. +.+-+..+++ +...+..+++++||||.+..+.
T Consensus 19 ~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~~~~~ 82 (301)
T COG1409 19 EELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDARVVNG 82 (301)
T ss_pred HHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCCchHH
Confidence 3456667777776666889999999999642 2222222222 2356778999999999987653
No 64
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.28 E-value=0.00085 Score=58.99 Aligned_cols=186 Identities=16% Similarity=0.246 Sum_probs=93.9
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccCC--CCC-----cHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHHh
Q 044282 9 LLRLFEYGGLPPKANYLFLGDYVDR--GKQ-----SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF 81 (275)
Q Consensus 9 L~~ll~~~g~~~~~~~vfLGD~VDR--G~~-----s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~~ 81 (275)
|.+.|+... +..+.+++|||++|- |.+ --+|...|..+ ...+.+++.+.||||... ...+ ....
T Consensus 19 fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Dfll-~~~f------~~~~ 89 (237)
T COG2908 19 FLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDFLL-GKRF------AQEA 89 (237)
T ss_pred HHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHHHH-HHHH------Hhhc
Confidence 455666533 355778899999963 322 13333333332 346779999999999543 2211 1111
Q ss_pred chhhhhccccccccCCeEEEE---cCeEEEecCCCCCCCCCHHHHHhcCCCCC----------CCCC--CcccccccCCC
Q 044282 82 NVRLWKTFTDCFNCLPVAALI---DEKILCMHGGLSPDLHSLDQIRSLQRPTD----------VPDT--GLLCDLLWSDP 146 (275)
Q Consensus 82 ~~~~~~~~~~~f~~LPla~iv---~~~il~vHgGi~p~~~~l~~i~~i~rp~~----------~~~~--~~~~dllWsdp 146 (275)
+ -+.-+|-..++ +.+++++||..-- +....-.......+ .+-. .-+..-+|+.-
T Consensus 90 g---------~~~l~~~~~~~~l~g~~~Ll~HGD~f~--t~~~~y~~~r~~~~~~~~~~lflnl~l~~R~ri~~k~r~~s 158 (237)
T COG2908 90 G---------GMTLLPDPIVLDLYGKRILLAHGDTFC--TDDRAYQWFRYKVHWAWLQLLFLNLPLRVRRRIAYKIRSLS 158 (237)
T ss_pred C---------ceEEcCcceeeeecCcEEEEEeCCccc--chHHHHHHHHHHcccHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 1 12333433333 5689999997531 11111110000000 0000 00011233332
Q ss_pred CCCCCCcccCCCCCc---eeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEc
Q 044282 147 SKDIQGWGMNDRGVS---FTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVD 223 (275)
Q Consensus 147 ~~~~~~~~~~~rg~~---~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~ 223 (275)
.|........ ....++++.+-+++++++.+|.||+..+..-....-.+|. ||.--..+++++++
T Consensus 159 -----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~--------lGdW~~~~s~~~v~ 225 (237)
T COG2908 159 -----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN--------LGDWVSEGSILEVD 225 (237)
T ss_pred -----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe--------cCcchhcceEEEEe
Confidence 1111111111 1235677888899999999999999987665543311111 12233577899988
Q ss_pred CCCc
Q 044282 224 ETLM 227 (275)
Q Consensus 224 ~~~~ 227 (275)
.+..
T Consensus 226 ~~~~ 229 (237)
T COG2908 226 DGGL 229 (237)
T ss_pred cCcE
Confidence 8754
No 65
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.27 E-value=0.0015 Score=54.52 Aligned_cols=44 Identities=30% Similarity=0.433 Sum_probs=32.3
Q ss_pred CCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 19 PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 19 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
.+.+.+|++||+++++..+.. +.++.++ +..+++++||||....
T Consensus 41 ~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 41 GPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred CCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 345789999999999987644 4444333 3469999999998644
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.27 E-value=0.0053 Score=50.79 Aligned_cols=47 Identities=26% Similarity=0.263 Sum_probs=29.3
Q ss_pred CCCeEEEeCCccCCCCCc-HHHH-HHHHHchhh---C-CCcEEEecCCccccc
Q 044282 20 PKANYLFLGDYVDRGKQS-LETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 66 (275)
Q Consensus 20 ~~~~~vfLGD~VDRG~~s-~evl-~ll~~lk~~---~-p~~v~llrGNHE~~~ 66 (275)
..+.+|++||++|.+..+ .+.. ..+..++.. . +..++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 456789999999987642 2222 222222211 1 346999999999853
No 67
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.22 E-value=0.00075 Score=60.31 Aligned_cols=59 Identities=22% Similarity=0.280 Sum_probs=38.1
Q ss_pred HHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHH----HHHHchhhCCCcEEEecCCccccc
Q 044282 8 DLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETIC----LLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 8 ~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~----ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
.|.++++.+.-...+.+|+.||++|+...+.+... ++..|+...+-.++++.||||...
T Consensus 27 ~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~~ 89 (253)
T TIGR00619 27 FLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVISGNHDSAQ 89 (253)
T ss_pred HHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEccCCCChh
Confidence 45555554443445778899999999876654432 333333223357999999999853
No 68
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.11 E-value=0.00089 Score=56.11 Aligned_cols=59 Identities=19% Similarity=0.128 Sum_probs=35.3
Q ss_pred HHHHHHHhcCCCCCCeEEEeCCccCCCCCcH-HHHHHH-HHchhhCCCcEEEecCCccccc
Q 044282 8 DLLRLFEYGGLPPKANYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 8 ~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll-~~lk~~~p~~v~llrGNHE~~~ 66 (275)
.+.++++.+...+.+.+|++||++|....+. +....+ +......+..+++++||||...
T Consensus 29 ~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 29 TLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 3445555444445678999999998754332 111111 1112234558999999999864
No 69
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.08 E-value=0.002 Score=55.41 Aligned_cols=29 Identities=17% Similarity=0.087 Sum_probs=22.6
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceE
Q 044282 165 GADKVTDFLQKHDLDLVCRAHQVVEDGYE 193 (275)
Q Consensus 165 g~~~~~~fl~~~~~~~iirgH~~~~~G~~ 193 (275)
.+..+.+.++..+++.+|.||+..+.-.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 44556777888999999999999875443
No 70
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.07 E-value=0.001 Score=62.05 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=38.9
Q ss_pred HHHHHHHHhcCCCCCCeEEEeCCccCCC-CCcHHHHHHHHH--chh--hCCCcEEEecCCccccc
Q 044282 7 SDLLRLFEYGGLPPKANYLFLGDYVDRG-KQSLETICLLLA--YKI--KYPENFFLLRGNHECAS 66 (275)
Q Consensus 7 ~~L~~ll~~~g~~~~~~~vfLGD~VDRG-~~s~evl~ll~~--lk~--~~p~~v~llrGNHE~~~ 66 (275)
..|.++++.+.-...+.+|+.||++|+. +.+.+++.++.. ++. ..+-.+++|.||||...
T Consensus 26 ~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~~ 90 (340)
T PHA02546 26 KFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHVLVGNHDMYY 90 (340)
T ss_pred HHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEccCCCccc
Confidence 3455555555444557788999999985 455555544433 211 23457999999999853
No 71
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.02 E-value=0.0014 Score=56.25 Aligned_cols=61 Identities=23% Similarity=0.243 Sum_probs=40.4
Q ss_pred HHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHc-hhh--CCCcEEEecCCccccchh
Q 044282 8 DLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAY-KIK--YPENFFLLRGNHECASIN 68 (275)
Q Consensus 8 ~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~l-k~~--~p~~v~llrGNHE~~~i~ 68 (275)
.|.++++.+.....+.+|++||++|....+.+.+..+... +.. ..-.++++.||||.....
T Consensus 29 ~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~ 92 (223)
T cd00840 29 AFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVFIIAGNHDSPSRL 92 (223)
T ss_pred HHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccc
Confidence 4666666655445567889999999887665544443332 211 245699999999987543
No 72
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.84 E-value=0.013 Score=53.40 Aligned_cols=44 Identities=27% Similarity=0.457 Sum_probs=31.9
Q ss_pred CeEEEeCCccCC-CCCcHHHH-HHHHHchhhCCCcEEEecCCccccch
Q 044282 22 ANYLFLGDYVDR-GKQSLETI-CLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 22 ~~~vfLGD~VDR-G~~s~evl-~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
+-+++.|||+|+ .+...+.+ ..|.. ++.|-.++++.||||...-
T Consensus 75 DlivltGD~~~~~~~~~~~~~~~~L~~--L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 75 DLIVLTGDYVDGDRPPGVAALALFLAK--LKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred CEEEEEeeeecCCCCCCHHHHHHHHHh--hhccCCEEEEecccccccc
Confidence 778889999996 55555444 44444 4467789999999988643
No 73
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=96.80 E-value=0.0036 Score=54.65 Aligned_cols=56 Identities=30% Similarity=0.317 Sum_probs=35.9
Q ss_pred HHHHHHHHHhcCCC--CCCeEEEeCCccCCCCC-cHH-HHHHHHHchhhCCCcEEEecCCcccc
Q 044282 6 YSDLLRLFEYGGLP--PKANYLFLGDYVDRGKQ-SLE-TICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 6 ~~~L~~ll~~~g~~--~~~~~vfLGD~VDRG~~-s~e-vl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
...|+++++.+.-. ..+-+|++||+++.|.. ..+ ++..+.. .+-.++.++||||..
T Consensus 24 ~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~ 83 (240)
T cd07402 24 AASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAA----LPIPVYLLPGNHDDR 83 (240)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhh----cCCCEEEeCCCCCCH
Confidence 34567777755432 45678899999998753 222 2222222 245689999999974
No 74
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.62 E-value=0.013 Score=51.70 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=27.4
Q ss_pred CeEEEeCCccCCCCC------------c---H-HHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 22 ANYLFLGDYVDRGKQ------------S---L-ETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 22 ~~~vfLGD~VDRG~~------------s---~-evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
+.+|++||++|+... . . ++..++..|. ..-.|+++.||||...
T Consensus 37 d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~--~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 37 KYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP--SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--cCCeEEEeCCCCCccc
Confidence 678899999998310 0 1 1223333332 3457999999999853
No 75
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.61 E-value=0.086 Score=47.27 Aligned_cols=30 Identities=10% Similarity=0.018 Sum_probs=24.2
Q ss_pred eChHHHHHHHHhCCCceEEEeeeeeccceEEe
Q 044282 164 FGADKVTDFLQKHDLDLVCRAHQVVEDGYEFF 195 (275)
Q Consensus 164 fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~ 195 (275)
-.++..+..|++.+-.+|+-||+. ++.+..
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~ 232 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVV 232 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeE
Confidence 367889999999999999999987 344443
No 76
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.57 E-value=0.013 Score=52.94 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=24.6
Q ss_pred hHHHHHHHHhCCCceEEEeeeeeccceEEecCCeE
Q 044282 166 ADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQL 200 (275)
Q Consensus 166 ~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~ 200 (275)
.+.+.+.++++++++++-||...-+-.....++++
T Consensus 182 ~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~ 216 (294)
T cd00839 182 RAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTV 216 (294)
T ss_pred HHHHHHHHHHhCCCEEEEccceeeEeechhhCCEe
Confidence 34577788999999999999996443333334444
No 77
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.52 E-value=0.0052 Score=52.86 Aligned_cols=46 Identities=20% Similarity=0.356 Sum_probs=32.4
Q ss_pred CCCeEEEeCCccCCCCCc--HHHHHHHHHchhhC----CCcEEEecCCcccc
Q 044282 20 PKANYLFLGDYVDRGKQS--LETICLLLAYKIKY----PENFFLLRGNHECA 65 (275)
Q Consensus 20 ~~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~----p~~v~llrGNHE~~ 65 (275)
..+-++||||++|.|+.+ .+....+..++-.+ ...++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 356788999999999964 23555555544222 24688999999975
No 78
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=96.50 E-value=0.007 Score=57.77 Aligned_cols=61 Identities=18% Similarity=0.220 Sum_probs=45.9
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhh-----------------------------------
Q 044282 6 YSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIK----------------------------------- 50 (275)
Q Consensus 6 ~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~----------------------------------- 50 (275)
+..|.++++.+.-...+-+|+.||++|+..-|.+++..++.+-.+
T Consensus 28 ~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~ 107 (405)
T TIGR00583 28 WNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELEFLSDASVVFNQSAFGNVNYEDPNI 107 (405)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchhhccchhhhcccccccccccccccc
Confidence 557788888776556677889999999999998888665443221
Q ss_pred -CCCcEEEecCCccccc
Q 044282 51 -YPENFFLLRGNHECAS 66 (275)
Q Consensus 51 -~p~~v~llrGNHE~~~ 66 (275)
..-.|++|-||||...
T Consensus 108 ~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 108 NVAIPVFSIHGNHDDPS 124 (405)
T ss_pred cCCCCEEEEcCCCCCcc
Confidence 1347999999999964
No 79
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.37 E-value=0.0082 Score=52.78 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=33.5
Q ss_pred HHHHHHhcCCCCCCeEEEeCCccCCCCCc---HHHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 9 LLRLFEYGGLPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 9 L~~ll~~~g~~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
|.++.+.......+.+|++||+.+..... .++..++..+ ...+++++||||...
T Consensus 47 l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 47 IERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FRDLILIRGNHDALI 103 (225)
T ss_pred HHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CCcEEEECCCCCCcc
Confidence 34444433334457899999999765542 2233333332 247999999999754
No 80
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=96.29 E-value=0.00041 Score=66.27 Aligned_cols=199 Identities=13% Similarity=0.015 Sum_probs=126.9
Q ss_pred CCCCCHHHHHHHHHhcCCCCC-CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGLPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 79 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~ 79 (275)
|.||.+.|+.++++.- |.. .-|++-|++++++....+.+..+...+...|+...+.|++||+..+-..++|..+...
T Consensus 53 ~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~ 130 (476)
T KOG0376|consen 53 SFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILT 130 (476)
T ss_pred hhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccC
Confidence 5688888888888753 332 3589999999999999999999999999999999999999999988888888776665
Q ss_pred Hhch---hhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHh-----------------------------cC
Q 044282 80 RFNV---RLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRS-----------------------------LQ 127 (275)
Q Consensus 80 ~~~~---~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~-----------------------------i~ 127 (275)
.++. .+...+...+.. |+.....+.++=-| -+ +.+.+.. +.
T Consensus 131 ~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~le~~-kv-----t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~ 203 (476)
T KOG0376|consen 131 PEGDKKSVVEMKIDEEDMD-LIESDYSGPVLEDH-KV-----TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLP 203 (476)
T ss_pred CccCCcccccccccccccc-ccccccCCcccccc-hh-----hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCC
Confidence 5531 122222221111 13333332222121 11 1111111 11
Q ss_pred CCCCCCCCCcccccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeec------------cceEEe
Q 044282 128 RPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVE------------DGYEFF 195 (275)
Q Consensus 128 rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~------------~G~~~~ 195 (275)
.+.+. .+-.+..|+++......+....++.+...++.....|+...++.-+++.+.-+. .+|...
T Consensus 204 ~~ve~---~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~r 280 (476)
T KOG0376|consen 204 SLVEI---SVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLR 280 (476)
T ss_pred cceEe---ecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeecc
Confidence 11111 144677888887655555555677777777788888888888888888885422 222222
Q ss_pred c---CCeEEEEecCCCCCC
Q 044282 196 A---NRQLVTIFSAPNYCG 211 (275)
Q Consensus 196 ~---~~~~itifSa~~y~~ 211 (275)
. .+.+++||+++.+|-
T Consensus 281 gn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 281 GNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CCccchHHHHHhCCCcchh
Confidence 1 234889999998873
No 81
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=95.83 E-value=0.017 Score=55.24 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=35.8
Q ss_pred HHHHHhcCCCCCCeEEEeCCccCCCCCcHHHH----HHHHHchhhCCCcEEEecCCccccc
Q 044282 10 LRLFEYGGLPPKANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 10 ~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl----~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
.++++.+.-...+.+|+.||++|++..+.+.. .++..|+. .+-.++++.||||...
T Consensus 29 ~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 29 DWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVLAGNHDSVA 88 (407)
T ss_pred HHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEEcCCCCChh
Confidence 34444444445677889999999986554432 22333332 2346999999999853
No 82
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.58 E-value=0.03 Score=48.06 Aligned_cols=66 Identities=17% Similarity=0.177 Sum_probs=37.6
Q ss_pred CCCCCHHHHHHHHHhcCC-CCCCeEEEeCCccCCCCCcHHH-HHHHHHchhhC---------------------CCcEEE
Q 044282 1 DIHGQYSDLLRLFEYGGL-PPKANYLFLGDYVDRGKQSLET-ICLLLAYKIKY---------------------PENFFL 57 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~-~~~~~~vfLGD~VDRG~~s~ev-l~ll~~lk~~~---------------------p~~v~l 57 (275)
|++|+=.-|.++++.+-. -..+.++||||++|.|--+-+- -..+...+-.+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 344444455666654432 2346688999999997533222 12222222211 246789
Q ss_pred ecCCccccc
Q 044282 58 LRGNHECAS 66 (275)
Q Consensus 58 lrGNHE~~~ 66 (275)
|.||||.-.
T Consensus 104 V~GNHDIG~ 112 (193)
T cd08164 104 IAGNHDVGY 112 (193)
T ss_pred ECCcccCCC
Confidence 999999843
No 83
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=95.39 E-value=0.048 Score=49.07 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=40.2
Q ss_pred CCCCCHHHHHHHHHh---cCCCCCCeEEEeCCccCCCCC-cHHHH----------HHHH--HchhhCCCcEEEecCCccc
Q 044282 1 DIHGQYSDLLRLFEY---GGLPPKANYLFLGDYVDRGKQ-SLETI----------CLLL--AYKIKYPENFFLLRGNHEC 64 (275)
Q Consensus 1 DIHG~~~~L~~ll~~---~g~~~~~~~vfLGD~VDRG~~-s~evl----------~ll~--~lk~~~p~~v~llrGNHE~ 64 (275)
|+||+++.+...++. ....+.+-+|++||+-..+.. ..+.+ .+.- .-....|--+++|.||||.
T Consensus 6 d~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~ 85 (262)
T cd00844 6 CCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEA 85 (262)
T ss_pred cCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCC
Confidence 899999988764443 223456778889999654432 23322 1111 1122356668999999997
Q ss_pred c
Q 044282 65 A 65 (275)
Q Consensus 65 ~ 65 (275)
.
T Consensus 86 ~ 86 (262)
T cd00844 86 S 86 (262)
T ss_pred H
Confidence 4
No 84
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.38 E-value=0.033 Score=52.65 Aligned_cols=62 Identities=21% Similarity=0.202 Sum_probs=43.5
Q ss_pred HHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHc-hhhC--CCcEEEecCCccccchh
Q 044282 7 SDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAY-KIKY--PENFFLLRGNHECASIN 68 (275)
Q Consensus 7 ~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~l-k~~~--p~~v~llrGNHE~~~i~ 68 (275)
.+|..+++.+.-...+-+|+-||+.|+..-|.+++..+... +... .-.|++|-||||...-.
T Consensus 27 ~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 27 KAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred HHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecCCCCchhcc
Confidence 44555666554445577889999999999998887776543 2221 23699999999997543
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.32 E-value=0.038 Score=45.72 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=30.6
Q ss_pred CCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 19 PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 19 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
.|++.+.+|||+.-.--...+...++-+ -++++++++||||---
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~ 87 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCH 87 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCc
Confidence 4677888999998654443444333333 3678999999999854
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=94.93 E-value=0.042 Score=48.44 Aligned_cols=60 Identities=28% Similarity=0.335 Sum_probs=38.1
Q ss_pred CCCCCH---------HHHHHHHHhcCCCCCC-eEEEeCCccCCCCCcH-----HHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQY---------SDLLRLFEYGGLPPKA-NYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~~---------~~L~~ll~~~g~~~~~-~~vfLGD~VDRG~~s~-----evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|+||.+ ..+.++++...-...+ -+|..||+++..+.+. .++..+-++. ..+ +..||||.-
T Consensus 8 D~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d~-~~~GNHe~d 82 (252)
T cd00845 8 DLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YDA-VTIGNHEFD 82 (252)
T ss_pred ccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CCE-Eeecccccc
Confidence 889776 5667777765443333 5567999999888653 4554444432 233 455999974
No 87
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=94.57 E-value=0.0044 Score=58.12 Aligned_cols=194 Identities=10% Similarity=-0.131 Sum_probs=117.3
Q ss_pred CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHHh----chhhhhccccccccCC
Q 044282 22 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF----NVRLWKTFTDCFNCLP 97 (275)
Q Consensus 22 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~~----~~~~~~~~~~~f~~LP 97 (275)
-..|+++++.+++.++++.+-+-+..++.+-.+.-..++||+.. +++++++.-.. ...+++..++-++.++
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccce
Confidence 35889999999999999999998888888888888999999554 33333332222 1346677888888888
Q ss_pred eEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCC--CCC-CCCcccccccCCCCCCCCCcccCCCCCceeeChHH--HHHH
Q 044282 98 VAALIDEKILCMHGGLSPDLHSLDQIRSLQRPT--DVP-DTGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADK--VTDF 172 (275)
Q Consensus 98 la~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~--~~~-~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~--~~~f 172 (275)
...+.. ++++.|++..|.......+..+.-.. +.. ...--..++=++-.. ...|.. ++....||-+. .-++
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~~--~~~~p~~gyDfwyqpr~ 199 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWEK--PGHSPLFGYDFWYQPRH 199 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-eccccc--CCCccccccceeecccc
Confidence 886655 99999999999654333322111000 000 000112222222111 112221 12222333222 2234
Q ss_pred HHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCC
Q 044282 173 LQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETL 226 (275)
Q Consensus 173 l~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~N~ga~l~i~~~~ 226 (275)
.......+..+.|.-...+...+.++ ++.++.+-|.-...+.++.+.+..+.
T Consensus 200 ~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 200 NVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTG 251 (476)
T ss_pred ceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCC
Confidence 44556666667776654444455555 77888888887778888888887763
No 88
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.09 E-value=0.063 Score=48.29 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=16.1
Q ss_pred HHHHHHh-CCCceEEEeeeeec
Q 044282 169 VTDFLQK-HDLDLVCRAHQVVE 189 (275)
Q Consensus 169 ~~~fl~~-~~~~~iirgH~~~~ 189 (275)
..++++. .++++||-||+...
T Consensus 209 ~~~la~~~~~vD~IlgGHsH~~ 230 (277)
T cd07410 209 AYELAEEVPGIDAILTGHQHRR 230 (277)
T ss_pred HHHHHhcCCCCcEEEeCCCccc
Confidence 3455665 68999999999864
No 89
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=93.76 E-value=0.079 Score=52.65 Aligned_cols=70 Identities=23% Similarity=0.267 Sum_probs=48.7
Q ss_pred ChHHHHHHHHhCCCc----eEEEeeeeec--cceEE-ecCCeEEEE---ecCCCCCCCCCCcEEEEEEcCCCceEEEEEc
Q 044282 165 GADKVTDFLQKHDLD----LVCRAHQVVE--DGYEF-FANRQLVTI---FSAPNYCGEFDNAGAMMSVDETLMCSFQILK 234 (275)
Q Consensus 165 g~~~~~~fl~~~~~~----~iirgH~~~~--~G~~~-~~~~~~iti---fSa~~y~~~~~N~ga~l~i~~~~~~~~~~~~ 234 (275)
.++..+..|+..|++ .||-||+||. +|=.. -++||++.| ||.. |...++=+|= -.|.+.-.......+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGY-TLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGY-TLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccce-EEEecCCcceeccCC
Confidence 566788899999999 9999999987 56553 589999999 6655 6555444444 444444445555555
Q ss_pred cC
Q 044282 235 PS 236 (275)
Q Consensus 235 p~ 236 (275)
|-
T Consensus 585 pF 586 (640)
T PF06874_consen 585 PF 586 (640)
T ss_pred CC
Confidence 54
No 90
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=92.79 E-value=0.34 Score=39.91 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=75.4
Q ss_pred CCCCCHHHHHHHHHhcCC--CCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHH
Q 044282 1 DIHGQYSDLLRLFEYGGL--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 78 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~ 78 (275)
|+||+++.+..-++.+.- .+-+-++++||+..-...+-+ +.-.+.=....|--.+++-||||
T Consensus 5 ~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~--------------- 68 (150)
T cd07380 5 DVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP--------------- 68 (150)
T ss_pred cCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC---------------
Confidence 789999998776665321 234567889999976665533 33333345567888999999998
Q ss_pred HHhchhhhhccccccccCCeEEEEcCeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCC
Q 044282 79 RRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDR 158 (275)
Q Consensus 79 ~~~~~~~~~~~~~~f~~LPla~iv~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~r 158 (275)
.-+|++.|.=+. .+...+++ ..+
T Consensus 69 ------------------------~~DILlTh~wP~-gi~~~~~~-------------------~~~------------- 91 (150)
T cd07380 69 ------------------------GVDILLTSEWPK-GISKLSKV-------------------PFE------------- 91 (150)
T ss_pred ------------------------CCCEEECCCCch-hhhhhCCC-------------------ccc-------------
Confidence 447888887321 11001100 000
Q ss_pred CCceeeChHHHHHHHHhCCCceEEEeeeee
Q 044282 159 GVSFTFGADKVTDFLQKHDLDLVCRAHQVV 188 (275)
Q Consensus 159 g~~~~fg~~~~~~fl~~~~~~~iirgH~~~ 188 (275)
..+..-|...+.+++++..-++.+.||..+
T Consensus 92 ~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012345778999999999999999999764
No 91
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=92.68 E-value=0.19 Score=44.81 Aligned_cols=60 Identities=23% Similarity=0.171 Sum_probs=35.4
Q ss_pred CCCCCH----------HHHHHHHHhcCCCCCCeEEEeCCccCCCCCc-----HHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQY----------SDLLRLFEYGGLPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~~----------~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|+||++ ..+..+++...-.+..-+|..||+++..+.+ ..++..+-++. -.+ +..||||.-
T Consensus 8 D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~GNHefd 82 (257)
T cd07408 8 DIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTPGNHEFD 82 (257)
T ss_pred cCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecccccccc
Confidence 899974 4456666655433444566699999876643 23333333332 234 456999963
No 92
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=92.22 E-value=0.13 Score=45.26 Aligned_cols=65 Identities=20% Similarity=0.237 Sum_probs=38.5
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHH--------------------------HHHHHchhhCCCc
Q 044282 1 DIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETI--------------------------CLLLAYKIKYPEN 54 (275)
Q Consensus 1 DIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl--------------------------~ll~~lk~~~p~~ 54 (275)
|.||+++.+.++.+.+.-...+-+||+||++-....+-|-. .++..| -..+--
T Consensus 13 ~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L-~~~~~p 91 (255)
T PF14582_consen 13 NFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL-GELGVP 91 (255)
T ss_dssp --TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH-HCC-SE
T ss_pred CcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH-HhcCCc
Confidence 68999999999988766556778999999986655444333 222222 234557
Q ss_pred EEEecCCccccc
Q 044282 55 FFLLRGNHECAS 66 (275)
Q Consensus 55 v~llrGNHE~~~ 66 (275)
+++|+||||...
T Consensus 92 ~~~vPG~~Dap~ 103 (255)
T PF14582_consen 92 VFVVPGNMDAPE 103 (255)
T ss_dssp EEEE--TTS-SH
T ss_pred EEEecCCCCchH
Confidence 999999999953
No 93
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=92.20 E-value=0.3 Score=44.18 Aligned_cols=61 Identities=23% Similarity=0.252 Sum_probs=36.0
Q ss_pred HHHHHHHhcCC--CCCCeEEEeCCccCCCCCcH--H------HHHHHHHchhhCC-CcEEEecCCccccchh
Q 044282 8 DLLRLFEYGGL--PPKANYLFLGDYVDRGKQSL--E------TICLLLAYKIKYP-ENFFLLRGNHECASIN 68 (275)
Q Consensus 8 ~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~--e------vl~ll~~lk~~~p-~~v~llrGNHE~~~i~ 68 (275)
.++.+++.+.- ++.+-+|+.||+++.+.... + .-.+...++..+| -.|+.+.||||....+
T Consensus 54 l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 54 LVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 34455544322 35567889999998876531 1 1112222333333 3799999999987543
No 94
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=92.17 E-value=6.9 Score=38.07 Aligned_cols=149 Identities=17% Similarity=0.128 Sum_probs=73.9
Q ss_pred cEEEecCCccccchhhhcCchHHHHHHhchhhhhccccccccCCeEEEEcC-eEEEecCCCCCCCCCHHHHHhcCCCCCC
Q 044282 54 NFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDE-KILCMHGGLSPDLHSLDQIRSLQRPTDV 132 (275)
Q Consensus 54 ~v~llrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~iv~~-~il~vHgGi~p~~~~l~~i~~i~rp~~~ 132 (275)
.|++.+||||........-...+. ...++...+-.|-.=|...-+++ .++..|| .+++++...-...+.
T Consensus 310 ~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~~~~ 379 (481)
T COG1311 310 KVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPGADY 379 (481)
T ss_pred eEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCCCCc
Confidence 689999999997654322222211 11233333223344465555554 5888898 367776654333222
Q ss_pred CCC-Ccc-cccccCCCCCCCCCcccCCCCCceeeChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCC
Q 044282 133 PDT-GLL-CDLLWSDPSKDIQGWGMNDRGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYC 210 (275)
Q Consensus 133 ~~~-~~~-~dllWsdp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~ 210 (275)
... ..+ +-|.|.--.+...+-.+ .+-|.+ +-|.=.---++++.||++. .|+..+.+.+++..+|-+.+.
T Consensus 380 ~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~k---D~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q~qT 450 (481)
T COG1311 380 DSPLKAMEELLKRRHLAPTYGGTLP-----IAPETK---DYLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQEQT 450 (481)
T ss_pred cchHHHHHHHHHhcccCCCCCCccc-----cccCCc---CceeeccCCcEEEEccccc-cceeEEeccceEEeeeecchh
Confidence 111 111 12223221111000000 000110 1111122467899999997 688888887888888877654
Q ss_pred CCCCCcEEEEEEcCC
Q 044282 211 GEFDNAGAMMSVDET 225 (275)
Q Consensus 211 ~~~~N~ga~l~i~~~ 225 (275)
. .+-++-|+..
T Consensus 451 e----fqk~vni~p~ 461 (481)
T COG1311 451 E----FQKMVNINPT 461 (481)
T ss_pred c----cceEEEecCc
Confidence 2 3345555444
No 95
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=91.95 E-value=0.19 Score=45.68 Aligned_cols=60 Identities=27% Similarity=0.334 Sum_probs=36.4
Q ss_pred CCCCCHH--------------HHHHHHHhcCCC-CCCeEEEeCCccCCCCC-c-----HHHHHHHHHchhhCCCcEEEec
Q 044282 1 DIHGQYS--------------DLLRLFEYGGLP-PKANYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPENFFLLR 59 (275)
Q Consensus 1 DIHG~~~--------------~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~-s-----~evl~ll~~lk~~~p~~v~llr 59 (275)
|+||++. .+..+++..... +..-+|..||++...+. | ..++..+-++.. .+ +..
T Consensus 8 D~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~----Da-~t~ 82 (288)
T cd07412 8 DFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV----DA-SAV 82 (288)
T ss_pred ccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----ee-eee
Confidence 8898754 366666655432 33456669999987664 2 234555545432 33 555
Q ss_pred CCcccc
Q 044282 60 GNHECA 65 (275)
Q Consensus 60 GNHE~~ 65 (275)
||||.-
T Consensus 83 GNHefd 88 (288)
T cd07412 83 GNHEFD 88 (288)
T ss_pred cccccc
Confidence 999974
No 96
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.73 E-value=0.33 Score=46.22 Aligned_cols=57 Identities=25% Similarity=0.343 Sum_probs=35.1
Q ss_pred HHHHHHhcCCC-CCCeEEEeCCccCCCCCc--HHHHHHHHHchhhCC----CcEEEecCCcccc
Q 044282 9 LLRLFEYGGLP-PKANYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECA 65 (275)
Q Consensus 9 L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~p----~~v~llrGNHE~~ 65 (275)
|.+.++..-+. ..+-.+|||||+|-|..+ -|--....++|-.++ ..++.+.||||-=
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCccccc
Confidence 34445444333 234567899999998764 233333444444444 4799999999973
No 97
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=91.64 E-value=9.1 Score=34.36 Aligned_cols=49 Identities=20% Similarity=0.312 Sum_probs=31.6
Q ss_pred CceEEEeeeeeccceEEec--CCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEE
Q 044282 178 LDLVCRAHQVVEDGYEFFA--NRQLVTIFSAPNYCGEFDNAGAMMSVD-ETLMCSFQ 231 (275)
Q Consensus 178 ~~~iirgH~~~~~G~~~~~--~~~~itifSa~~y~~~~~N~ga~l~i~-~~~~~~~~ 231 (275)
-+..+.|||+.. |.+.+. +++-+.+.|.|.|. ..|.++.+| +++.+...
T Consensus 204 PhVyf~Gnq~~f-~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~~v 255 (257)
T cd07387 204 PHVYFAGNQPKF-GTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECEPI 255 (257)
T ss_pred CCEEEeCCCcce-eeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEEEE
Confidence 567889999863 445443 25667777889874 466666665 45555543
No 98
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=91.22 E-value=0.35 Score=43.20 Aligned_cols=53 Identities=17% Similarity=0.125 Sum_probs=28.7
Q ss_pred HHHHHHHHhcCCC-CCCeE-EEeCCccCCCCCcH-----HHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 7 SDLLRLFEYGGLP-PKANY-LFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 7 ~~L~~ll~~~g~~-~~~~~-vfLGD~VDRG~~s~-----evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
..+..+++...-. ..+.+ |..||+++..+.+. .++..+.++ +-.+ +. ||||..
T Consensus 36 ~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~~----g~da-~~-GNHefd 95 (264)
T cd07411 36 AHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNAL----GVDA-MV-GHWEFT 95 (264)
T ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHhh----CCeE-Ee-cccccc
Confidence 3445556554322 23334 56999998876442 344444433 2233 33 999964
No 99
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=91.09 E-value=0.31 Score=43.49 Aligned_cols=24 Identities=21% Similarity=0.279 Sum_probs=20.3
Q ss_pred HHHHHHHHhCCCceEEEeeeeecc
Q 044282 167 DKVTDFLQKHDLDLVCRAHQVVED 190 (275)
Q Consensus 167 ~~~~~fl~~~~~~~iirgH~~~~~ 190 (275)
+.+.+++++.++++++-||.....
T Consensus 191 ~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 191 DRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHcCCCEEEeCCcccce
Confidence 557788899999999999998744
No 100
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=90.33 E-value=0.48 Score=42.25 Aligned_cols=56 Identities=23% Similarity=0.135 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHhcCCCCCC-eEEEeCCccCCCCCc-----HHHHHHHHHchhhCCCcEEEecCCccc
Q 044282 4 GQYSDLLRLFEYGGLPPKA-NYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 64 (275)
Q Consensus 4 G~~~~L~~ll~~~g~~~~~-~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~ 64 (275)
|-+..+..++++..-...+ -+|..||+++..+.+ ..++..+..+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4467777777765443333 456699999887532 44555555443 23567899997
No 101
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=89.59 E-value=0.85 Score=40.34 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=30.3
Q ss_pred CCCeEEEeCCccCCCCC-----cHHHHHHHHHchhhCCCcEEEecCCccccchh
Q 044282 20 PKANYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPENFFLLRGNHECASIN 68 (275)
Q Consensus 20 ~~~~~vfLGD~VDRG~~-----s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~ 68 (275)
..+++|++||+-.-.+. ..++-.++..++.. .+++++||||...-.
T Consensus 63 ~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~---evi~i~GNHD~~i~~ 113 (235)
T COG1407 63 GPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER---EVIIIRGNHDNGIEE 113 (235)
T ss_pred CCCEEEEcCccccccCccccccHHHHHHHHHHhccC---cEEEEeccCCCcccc
Confidence 45789999999855443 34444444433322 499999999996543
No 102
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=87.50 E-value=1.1 Score=40.37 Aligned_cols=55 Identities=15% Similarity=0.063 Sum_probs=29.3
Q ss_pred HHHHHHHHHhcCCCCCC-eEEEeCCccCCCCCc-----HHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 6 YSDLLRLFEYGGLPPKA-NYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 6 ~~~L~~ll~~~g~~~~~-~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
+..+..+++...-.... -++..||+++..+.+ ..++..+-.+. -.+. ..||||.-
T Consensus 34 ~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~g----~D~~-~lGNHefd 94 (281)
T cd07409 34 FARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLLG----YDAM-TLGNHEFD 94 (281)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhcC----CCEE-Eecccccc
Confidence 34455566654332223 344589999886643 33333333332 2344 45999974
No 103
>PLN02533 probable purple acid phosphatase
Probab=87.28 E-value=0.78 Score=44.20 Aligned_cols=24 Identities=25% Similarity=0.367 Sum_probs=20.4
Q ss_pred HHHHHHHHhCCCceEEEeeeeecc
Q 044282 167 DKVTDFLQKHDLDLVCRAHQVVED 190 (275)
Q Consensus 167 ~~~~~fl~~~~~~~iirgH~~~~~ 190 (275)
+.++..++++++++++-||.+.-+
T Consensus 312 ~~le~Ll~~~~VdlvlsGH~H~Ye 335 (427)
T PLN02533 312 ESMETLLYKARVDLVFAGHVHAYE 335 (427)
T ss_pred HHHHHHHHHhCCcEEEecceeccc
Confidence 567888999999999999999533
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=86.09 E-value=0.94 Score=49.10 Aligned_cols=60 Identities=20% Similarity=0.161 Sum_probs=36.1
Q ss_pred CCCCCH---HHHHHHHHhcCCCCCCeEEE-eCCccCCCCCc-----HHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQY---SDLLRLFEYGGLPPKANYLF-LGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~~---~~L~~ll~~~g~~~~~~~vf-LGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
|+||.+ ..+..+++...-...+.+++ .||++++.+.+ ..++.++-++. --.+..||||.-
T Consensus 668 D~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEfd 736 (1163)
T PRK09419 668 DFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEFD 736 (1163)
T ss_pred ecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEecccccc
Confidence 899875 44455555443222333444 89999987654 24455554442 235689999973
No 105
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=84.60 E-value=1.2 Score=43.92 Aligned_cols=61 Identities=26% Similarity=0.279 Sum_probs=36.3
Q ss_pred CCCCCHH---------------HHHHHHHhcCCCCCCeEEE-eCCccCCCCC------cHHHHHHHHHchhhCCCcEEEe
Q 044282 1 DIHGQYS---------------DLLRLFEYGGLPPKANYLF-LGDYVDRGKQ------SLETICLLLAYKIKYPENFFLL 58 (275)
Q Consensus 1 DIHG~~~---------------~L~~ll~~~g~~~~~~~vf-LGD~VDRG~~------s~evl~ll~~lk~~~p~~v~ll 58 (275)
|+||.+. .+..+++...-.....+++ .||++++.+- ....+.+|-.|+. =.+.
T Consensus 34 D~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y-----Da~t 108 (517)
T COG0737 34 DLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY-----DAMT 108 (517)
T ss_pred cccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC-----cEEe
Confidence 7898888 3333333332222234444 9999998443 3446666666652 3477
Q ss_pred cCCccccc
Q 044282 59 RGNHECAS 66 (275)
Q Consensus 59 rGNHE~~~ 66 (275)
.||||.-.
T Consensus 109 iGNHEFd~ 116 (517)
T COG0737 109 LGNHEFDY 116 (517)
T ss_pred eccccccc
Confidence 89999953
No 106
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=83.47 E-value=1.8 Score=39.97 Aligned_cols=59 Identities=22% Similarity=0.062 Sum_probs=35.0
Q ss_pred CCCCCHH------HHHHHHHhcCC-----CCCCeEEEeCCccCCCCC-------------cHHHHHHHHHchhhCCCcEE
Q 044282 1 DIHGQYS------DLLRLFEYGGL-----PPKANYLFLGDYVDRGKQ-------------SLETICLLLAYKIKYPENFF 56 (275)
Q Consensus 1 DIHG~~~------~L~~ll~~~g~-----~~~~~~vfLGD~VDRG~~-------------s~evl~ll~~lk~~~p~~v~ 56 (275)
|+||++. .+..+++...- .++.-+|..||.+..++. ..-++.++-++. -=.
T Consensus 8 D~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-----~Da 82 (313)
T cd08162 8 DGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-----VQA 82 (313)
T ss_pred ccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC-----CcE
Confidence 8999853 44444444321 233445669999876543 334455555554 234
Q ss_pred EecCCccc
Q 044282 57 LLRGNHEC 64 (275)
Q Consensus 57 llrGNHE~ 64 (275)
+..||||.
T Consensus 83 ~tlGNHEF 90 (313)
T cd08162 83 IALGNHEF 90 (313)
T ss_pred Eecccccc
Confidence 77899996
No 107
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=81.54 E-value=23 Score=29.28 Aligned_cols=99 Identities=23% Similarity=0.360 Sum_probs=64.0
Q ss_pred HHhcCCCCC-CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHHhchhhhhcccc
Q 044282 13 FEYGGLPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTD 91 (275)
Q Consensus 13 l~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~ 91 (275)
|++.-.|.. ..++++|++. |.|++++|..+. ..++++||--|..
T Consensus 22 FkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~-------------------------- 66 (183)
T KOG3325|consen 22 FKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN-------------------------- 66 (183)
T ss_pred HHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc--------------------------
Confidence 333334443 5678899865 578888886653 5799999976653
Q ss_pred ccccCCeEEEE--c-CeEEEecCCCCCCCCCHHHHHhcCCCCCCCCCCcccccccCCCCCCCCCcccCCCCCceeeChHH
Q 044282 92 CFNCLPVAALI--D-EKILCMHGGLSPDLHSLDQIRSLQRPTDVPDTGLLCDLLWSDPSKDIQGWGMNDRGVSFTFGADK 168 (275)
Q Consensus 92 ~f~~LPla~iv--~-~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fg~~~ 168 (275)
...|..-++ + =++.|+||-.- +=|+||. +
T Consensus 67 --~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~--------------------s 98 (183)
T KOG3325|consen 67 --LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE--------------------S 98 (183)
T ss_pred --ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--------------------H
Confidence 111322222 2 27899999421 2355553 5
Q ss_pred HHHHHHhCCCceEEEeeeeeccceEE
Q 044282 169 VTDFLQKHDLDLVCRAHQVVEDGYEF 194 (275)
Q Consensus 169 ~~~fl~~~~~~~iirgH~~~~~G~~~ 194 (275)
+...-+..+++.++-||+..-+-|+.
T Consensus 99 L~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 99 LALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred HHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 56666778999999999998777763
No 108
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=81.45 E-value=1.9 Score=39.18 Aligned_cols=38 Identities=24% Similarity=0.094 Sum_probs=23.8
Q ss_pred eEEEeCCccCCCCCc-------HHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 23 NYLFLGDYVDRGKQS-------LETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 23 ~~vfLGD~VDRG~~s-------~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
-+|..||.+..-+.+ .-++.++-++. -=.+..||||.-
T Consensus 53 Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg-----yDa~tlGNHEFd 97 (282)
T cd07407 53 LLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP-----YDLLTIGNHELY 97 (282)
T ss_pred EEEeCCCccCCeeceeeecCCChHHHHHHHhcC-----CcEEeecccccC
Confidence 345599999875443 22344444443 345788999994
No 109
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=81.33 E-value=1.2 Score=43.11 Aligned_cols=41 Identities=24% Similarity=0.383 Sum_probs=33.7
Q ss_pred CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 22 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 22 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
+++=.+||+-||||++-.+++-|..+. .+-+-.||||-..+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 345579999999999999999887653 67788899998655
No 110
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=79.89 E-value=2.3 Score=42.99 Aligned_cols=60 Identities=18% Similarity=0.116 Sum_probs=34.9
Q ss_pred CCCCCHHH----------------HHHHHHhcCCC-CCCeEEEeCCccCCCCCc-------------HHHHHHHHHchhh
Q 044282 1 DIHGQYSD----------------LLRLFEYGGLP-PKANYLFLGDYVDRGKQS-------------LETICLLLAYKIK 50 (275)
Q Consensus 1 DIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s-------------~evl~ll~~lk~~ 50 (275)
||||++.. +..+++...-. ++.-+|-.||.+...+.+ .-++.++-.|.
T Consensus 10 DlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~mN~lg-- 87 (626)
T TIGR01390 10 DLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAMNLLK-- 87 (626)
T ss_pred CCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHHhhcC--
Confidence 89998643 34445443221 233455599999876543 12444444443
Q ss_pred CCCcEEEecCCcccc
Q 044282 51 YPENFFLLRGNHECA 65 (275)
Q Consensus 51 ~p~~v~llrGNHE~~ 65 (275)
-=....||||.-
T Consensus 88 ---yDa~tlGNHEFd 99 (626)
T TIGR01390 88 ---YDVGNLGNHEFN 99 (626)
T ss_pred ---ccEEeccccccc
Confidence 234778999963
No 111
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=79.71 E-value=3.1 Score=38.77 Aligned_cols=48 Identities=19% Similarity=0.163 Sum_probs=30.1
Q ss_pred CCCCeEEEeCCccCCCCCc---HHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 19 PPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 19 ~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
...+-+||+||.|+. ... ..+|.-..+=.+.+.--..++.||||+...
T Consensus 99 E~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 345678999999997 333 333333333233444456789999999643
No 112
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=78.70 E-value=2.8 Score=42.66 Aligned_cols=60 Identities=17% Similarity=0.104 Sum_probs=35.9
Q ss_pred CCCCCHHH----------------HHHHHHhcCCC-CCCeEEEeCCccCCCCCcH-------------HHHHHHHHchhh
Q 044282 1 DIHGQYSD----------------LLRLFEYGGLP-PKANYLFLGDYVDRGKQSL-------------ETICLLLAYKIK 50 (275)
Q Consensus 1 DIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~-------------evl~ll~~lk~~ 50 (275)
|+||++.. +..+++...-. ++.-+|-.||.+...+.+- -++..+-.|.
T Consensus 33 DlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~amN~lg-- 110 (649)
T PRK09420 33 DLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAMNTLD-- 110 (649)
T ss_pred ccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHHHhcC--
Confidence 89998643 33444443221 3344556999998766431 2455555554
Q ss_pred CCCcEEEecCCcccc
Q 044282 51 YPENFFLLRGNHECA 65 (275)
Q Consensus 51 ~p~~v~llrGNHE~~ 65 (275)
-=....||||.-
T Consensus 111 ---yDa~tlGNHEFd 122 (649)
T PRK09420 111 ---YDVGNLGNHEFN 122 (649)
T ss_pred ---CcEEeccchhhh
Confidence 345788999963
No 113
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=78.41 E-value=2.4 Score=38.41 Aligned_cols=15 Identities=27% Similarity=0.277 Sum_probs=12.7
Q ss_pred CCCceEEEeeeeecc
Q 044282 176 HDLDLVCRAHQVVED 190 (275)
Q Consensus 176 ~~~~~iirgH~~~~~ 190 (275)
.++++||-||+.+.-
T Consensus 208 ~giD~IigGHsH~~~ 222 (285)
T cd07405 208 GGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCCEEEeCCCCccc
Confidence 589999999998754
No 114
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=73.18 E-value=4.1 Score=44.25 Aligned_cols=24 Identities=29% Similarity=0.380 Sum_probs=17.0
Q ss_pred hHHHHHHHHh-CCCceEEEeeeeec
Q 044282 166 ADKVTDFLQK-HDLDLVCRAHQVVE 189 (275)
Q Consensus 166 ~~~~~~fl~~-~~~~~iirgH~~~~ 189 (275)
++++.+..++ -+++.||-||++..
T Consensus 256 en~~~~la~~~~gID~Il~GHsH~~ 280 (1163)
T PRK09419 256 EDSVYDLAEKTKGIDAIVAGHQHGL 280 (1163)
T ss_pred chHHHHHHHhCCCCcEEEeCCCccc
Confidence 3445566644 58999999998753
No 115
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=71.92 E-value=5.4 Score=37.52 Aligned_cols=64 Identities=28% Similarity=0.433 Sum_probs=39.1
Q ss_pred CCCHHHHH---HHHHhcCCCCCCeEEEeCCccC-CCCC---cHHH---------HHHHHHchhhCCCcEEEecCCccccc
Q 044282 3 HGQYSDLL---RLFEYGGLPPKANYLFLGDYVD-RGKQ---SLET---------ICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 3 HG~~~~L~---~ll~~~g~~~~~~~vfLGD~VD-RG~~---s~ev---------l~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
||.++.+- ...++.|-.+-+-++++||+=- |-.. |+.| ..--+.=.+..|---++|-||||.+.
T Consensus 10 HG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAsn 89 (456)
T KOG2863|consen 10 HGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEASN 89 (456)
T ss_pred chhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHHH
Confidence 88888876 4455666667788899999852 2111 1111 11111123446667789999999974
No 116
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=71.29 E-value=6.9 Score=38.94 Aligned_cols=41 Identities=27% Similarity=0.149 Sum_probs=25.5
Q ss_pred CCCeEEEeCCccCCCCCc-----HHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 20 PKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 20 ~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
++.-+|..||.+...+.+ ...+.++-++. --.+..||||.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 344566799999765533 23344444443 346788999974
No 117
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=70.20 E-value=27 Score=29.95 Aligned_cols=85 Identities=16% Similarity=0.258 Sum_probs=61.7
Q ss_pred CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCch----------------HHHHHHhchhh
Q 044282 22 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRL 85 (275)
Q Consensus 22 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~----------------~e~~~~~~~~~ 85 (275)
..+||||- |-+.-|.+.|+-+|+-+|.++.++ .|+-|.|..+....|. .|+.+.|-..+
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 46899995 888999999999999888877666 8999998876543332 33334443456
Q ss_pred hhccccccccCCeEEEEcCeEEEecC
Q 044282 86 WKTFTDCFNCLPVAALIDEKILCMHG 111 (275)
Q Consensus 86 ~~~~~~~f~~LPla~iv~~~il~vHg 111 (275)
|..+...+.++++...+-.+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 66777777777777666667777776
No 118
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=69.34 E-value=6.4 Score=41.11 Aligned_cols=40 Identities=20% Similarity=0.017 Sum_probs=25.1
Q ss_pred CCeEEEeCCccCCCCCc--------------HHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 21 KANYLFLGDYVDRGKQS--------------LETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 21 ~~~~vfLGD~VDRG~~s--------------~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
+.-+|-.||.+-.-+.+ .-++.++-.|. -=....||||.-
T Consensus 160 NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 160 NVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred CEEEEecCCCCCCCcccchhhhccccccCcchHHHHHHhccC-----CCEEEechhhcc
Confidence 34455699999865532 12555555554 345788999973
No 119
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=67.21 E-value=5.6 Score=33.98 Aligned_cols=73 Identities=19% Similarity=0.282 Sum_probs=43.5
Q ss_pred CCCeEEEeCCcc--CCCCCcHHHHHHHHHchhhCCCcEEEecCCccccchhhhcCchHHHHHHhchhhhhccccccccCC
Q 044282 20 PKANYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLP 97 (275)
Q Consensus 20 ~~~~~vfLGD~V--DRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP 97 (275)
+++.++.-||+- =|=++..+-+.++-+| |+.=+++|||||.+.-. ...+...+... .-..++.|+.+-
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l~n 112 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFELLN 112 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeEee
Confidence 455666789975 3445555666666554 78889999999997542 12233333222 334566677666
Q ss_pred eEEEEc
Q 044282 98 VAALID 103 (275)
Q Consensus 98 la~iv~ 103 (275)
+| +++
T Consensus 113 ~a-I~G 117 (230)
T COG1768 113 YA-IVG 117 (230)
T ss_pred EE-EEE
Confidence 44 545
No 120
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=66.51 E-value=7.1 Score=33.21 Aligned_cols=62 Identities=15% Similarity=0.169 Sum_probs=35.9
Q ss_pred HHHHHHHHHhcC-CCCCCeEEEeCCccCCCCCcHH----------HHHHHHHc-----hhhCCCcEEEecCCccccch
Q 044282 6 YSDLLRLFEYGG-LPPKANYLFLGDYVDRGKQSLE----------TICLLLAY-----KIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 6 ~~~L~~ll~~~g-~~~~~~~vfLGD~VDRG~~s~e----------vl~ll~~l-----k~~~p~~v~llrGNHE~~~i 67 (275)
++.|.++|+.+. -..-..+|++|+++|.-....+ ....+..+ ++..--+|+++.|+||....
T Consensus 16 ~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 16 LEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccEEEEeCCCcccccc
Confidence 667888888777 5556789999999997322210 11111111 12233589999999998654
No 121
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=63.49 E-value=13 Score=37.41 Aligned_cols=41 Identities=24% Similarity=0.402 Sum_probs=35.4
Q ss_pred CeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccccch
Q 044282 22 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 67 (275)
Q Consensus 22 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~i 67 (275)
+++-.+||+.||||.+-.+++.|+... +|=+-.||||-..+
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWM 226 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWM 226 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHH
Confidence 467789999999999999999998753 78899999998655
No 122
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=55.18 E-value=16 Score=38.12 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=13.3
Q ss_pred HHh-CCCceEEEeeeeec
Q 044282 173 LQK-HDLDLVCRAHQVVE 189 (275)
Q Consensus 173 l~~-~~~~~iirgH~~~~ 189 (275)
|++ -+++.||-||++..
T Consensus 272 l~~v~gID~IlgGHsH~~ 289 (780)
T PRK09418 272 LTEVPGVDAVLMGHSHTE 289 (780)
T ss_pred HhcCCCCCEEEECCCCCc
Confidence 444 38999999999864
No 123
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=53.91 E-value=15 Score=36.43 Aligned_cols=18 Identities=17% Similarity=0.350 Sum_probs=13.8
Q ss_pred HHHHhC---CCceEEEeeeee
Q 044282 171 DFLQKH---DLDLVCRAHQVV 188 (275)
Q Consensus 171 ~fl~~~---~~~~iirgH~~~ 188 (275)
++.++. ++++||-||++.
T Consensus 236 ~la~~~~~~~IDvIlgGHsH~ 256 (551)
T PRK09558 236 EMARSLPAGGLDMIVGGHSQD 256 (551)
T ss_pred HHHHhCCccCceEEEeCCCCc
Confidence 344544 799999999985
No 124
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=47.01 E-value=25 Score=33.59 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=19.8
Q ss_pred HHHHHHHhCCCceEEEeeeeecc
Q 044282 168 KVTDFLQKHDLDLVCRAHQVVED 190 (275)
Q Consensus 168 ~~~~fl~~~~~~~iirgH~~~~~ 190 (275)
.++-+|+++++++.|-||+...+
T Consensus 239 ~L~PLL~ky~VdlYisGHDH~lq 261 (394)
T PTZ00422 239 YLLPLLKDAQVDLYISGYDRNME 261 (394)
T ss_pred HHHHHHHHcCcCEEEEccccceE
Confidence 57789999999999999998543
No 125
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=39.51 E-value=50 Score=29.80 Aligned_cols=60 Identities=18% Similarity=0.192 Sum_probs=34.2
Q ss_pred CCCCC--HHHHHHHHHhcCCCCCCeEE-EeCCccCCC-CCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 1 DIHGQ--YSDLLRLFEYGGLPPKANYL-FLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 1 DIHG~--~~~L~~ll~~~g~~~~~~~v-fLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
||=|. ...+...|..+......+++ ..||....| --+-++...|..+- -.++.+ |||+.-
T Consensus 8 Di~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 8 DVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred ecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 44455 34455555554433233344 478888665 34566776666543 356665 899884
No 126
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.57 E-value=1.2e+02 Score=24.24 Aligned_cols=57 Identities=25% Similarity=0.232 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeCCccCCCCCc--------HHHHHHHHHchhhCCCcEEEec---CCcccc
Q 044282 6 YSDLLRLFEYGGLPPKANYLFLGDYVDRGKQS--------LETICLLLAYKIKYPENFFLLR---GNHECA 65 (275)
Q Consensus 6 ~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s--------~evl~ll~~lk~~~p~~v~llr---GNHE~~ 65 (275)
++.|++.++..+-...-.++|+|+-.|++-+| ..|+.-. +| ..|..+++|. ||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~a--lk-~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEA--LK-HAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHH--HH-hCCCceEEEEEEecCCCcc
Confidence 57788888887665565577999999998765 3333222 23 4677766653 666554
No 127
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=38.46 E-value=77 Score=31.67 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=31.4
Q ss_pred CHHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHH
Q 044282 5 QYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLA 46 (275)
Q Consensus 5 ~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 46 (275)
.+..|..+|..+.-...+-+|.=||++.--.-|.++|.-++.
T Consensus 37 Sf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~ 78 (646)
T KOG2310|consen 37 SFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLE 78 (646)
T ss_pred hHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHH
Confidence 467888888887666666777889999888888776655433
No 128
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=38.22 E-value=67 Score=27.98 Aligned_cols=37 Identities=24% Similarity=0.333 Sum_probs=27.6
Q ss_pred HHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCC
Q 044282 172 FLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYC 210 (275)
Q Consensus 172 fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~ 210 (275)
.+-..|+++||-||..+..+++... +++| +||-=|+.
T Consensus 200 ~l~~~G~DvIiG~H~H~~~~~e~~~-~~~I-~YslGNfi 236 (239)
T smart00854 200 ALIDAGADVVIGHHPHVLQPIEIYK-GKLI-AYSLGNFI 236 (239)
T ss_pred HHHHcCCCEEEcCCCCcCCceEEEC-CEEE-EEcccccc
Confidence 3333699999999999999999864 5665 67765553
No 129
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=36.36 E-value=1.1e+02 Score=23.32 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=13.1
Q ss_pred HHHHHHHHhcCCCCCCeEEEeCCc
Q 044282 7 SDLLRLFEYGGLPPKANYLFLGDY 30 (275)
Q Consensus 7 ~~L~~ll~~~g~~~~~~~vfLGD~ 30 (275)
.-|.+.|+..++|... ++|-|+
T Consensus 14 ~~l~~Fl~~~~~P~G~--~~Lr~~ 35 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGP--LLLRDY 35 (100)
T ss_pred HHHHHHHHhcCCCCCc--eEcccC
Confidence 3456667777776654 445555
No 130
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=33.94 E-value=33 Score=30.57 Aligned_cols=87 Identities=28% Similarity=0.347 Sum_probs=45.5
Q ss_pred CeEEEeCCcc-CCCCC---cHHHHHHHHHchh-------hCCCcEEEecCCccccchhhhcCchHHHHHHhc-hhhh-hc
Q 044282 22 ANYLFLGDYV-DRGKQ---SLETICLLLAYKI-------KYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLW-KT 88 (275)
Q Consensus 22 ~~~vfLGD~V-DRG~~---s~evl~ll~~lk~-------~~p~~v~llrGNHE~~~i~~~~gf~~e~~~~~~-~~~~-~~ 88 (275)
+-.+||||-. ||=.. --=+|.||-++.- +-..+|++|-||||.-. |..| ..++. .++. ..
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny------~arlanhkls~gD 158 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY------MARLANHKLSAGD 158 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchH------HHHHhhCCCCccc
Confidence 4578888866 44211 1223444433322 13468999999999853 2222 11221 0110 11
Q ss_pred cccccccCCeEEEEc-CeEEEecCCCCC
Q 044282 89 FTDCFNCLPVAALID-EKILCMHGGLSP 115 (275)
Q Consensus 89 ~~~~f~~LPla~iv~-~~il~vHgGi~p 115 (275)
-...+..+|++-.-. .+++..|-||-.
T Consensus 159 TYnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 159 TYNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred hhhccccccccccCcchhhhhcccCcee
Confidence 223456777764322 358889999864
No 131
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=30.62 E-value=60 Score=29.29 Aligned_cols=39 Identities=26% Similarity=0.468 Sum_probs=24.4
Q ss_pred eEEEeCCccCCCCCcHHHH-HHHHHchhhCCCcEEEecCCcccc
Q 044282 23 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 23 ~~vfLGD~VDRG~~s~evl-~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
+++|+||+|.+ ...+.+ ..|-.+|.+++..+.+ .|=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 68999999954 334443 3455677777766444 455554
No 132
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=29.78 E-value=95 Score=22.42 Aligned_cols=58 Identities=14% Similarity=0.075 Sum_probs=31.6
Q ss_pred CHHHHHHHHHhcC--CCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCc
Q 044282 5 QYSDLLRLFEYGG--LPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 62 (275)
Q Consensus 5 ~~~~L~~ll~~~g--~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNH 62 (275)
+.+.+..+++.+. ++....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 23 Np~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 23 NPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3445555554432 234455667888888777776655555444444555655555443
No 133
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=29.53 E-value=92 Score=26.98 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=26.6
Q ss_pred HHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCC
Q 044282 172 FLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNY 209 (275)
Q Consensus 172 fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y 209 (275)
.+-..|+++||-||+.+..+++.+. +++ -+||-=|+
T Consensus 202 ~l~~~G~D~IiG~H~Hv~q~~E~~~-~~~-I~YSlGNf 237 (239)
T cd07381 202 ALIDAGADLVIGHHPHVLQGIEIYK-GKL-IFYSLGNF 237 (239)
T ss_pred HHHHCCCCEEEcCCCCcCCCeEEEC-CEE-EEEcCCCc
Confidence 3444699999999999999999864 444 44776554
No 134
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=27.89 E-value=59 Score=29.16 Aligned_cols=37 Identities=30% Similarity=0.495 Sum_probs=24.7
Q ss_pred eEEEeCCccCCCCCcHHH-HHHHHHchhhCCCcEEEecCC
Q 044282 23 NYLFLGDYVDRGKQSLET-ICLLLAYKIKYPENFFLLRGN 61 (275)
Q Consensus 23 ~~vfLGD~VDRG~~s~ev-l~ll~~lk~~~p~~v~llrGN 61 (275)
+++|+||+|.+ ..+.+ -..|-.||.+|--.+.++-|+
T Consensus 2 riLfiGDvvGk--~Gr~~v~~~Lp~lk~kyk~dfvI~N~E 39 (266)
T COG1692 2 RILFIGDVVGK--PGRKAVKEHLPQLKSKYKIDFVIVNGE 39 (266)
T ss_pred eEEEEecccCc--chHHHHHHHhHHHHHhhcCcEEEEcCc
Confidence 68999999976 22333 345666787776667666554
No 135
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=27.87 E-value=1.1e+02 Score=25.29 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=27.7
Q ss_pred CCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEE
Q 044282 21 KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 57 (275)
Q Consensus 21 ~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~l 57 (275)
+-++||+|=.+|+|.-+-++..+|-.|+ +.+|++
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~l 72 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVAL 72 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEE
Confidence 4579999999999999999999987764 445544
No 136
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=26.30 E-value=1.2e+02 Score=27.11 Aligned_cols=52 Identities=15% Similarity=0.162 Sum_probs=30.8
Q ss_pred HHHHHHhcCCCCCCeEE-EeCCccCCC-CCcHHHHHHHHHchhhCCCcEEEecCCcccc
Q 044282 9 LLRLFEYGGLPPKANYL-FLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 65 (275)
Q Consensus 9 L~~ll~~~g~~~~~~~v-fLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~llrGNHE~~ 65 (275)
+...|....-....+++ -.||..-.| .-+-++...|..+.+ .+..+ ||||.-
T Consensus 17 ~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 17 VKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred HHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 34444443222223344 479998766 366777777776643 45555 999874
No 137
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=24.14 E-value=1.6e+02 Score=26.14 Aligned_cols=67 Identities=19% Similarity=0.326 Sum_probs=40.1
Q ss_pred CcccccccCCCCCCCCCcccCCCCC-ceee--ChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEec
Q 044282 136 GLLCDLLWSDPSKDIQGWGMNDRGV-SFTF--GADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFS 205 (275)
Q Consensus 136 ~~~~dllWsdp~~~~~~~~~~~rg~-~~~f--g~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifS 205 (275)
...|.|-|+|..+....-.-..|-. .... ....+-+||+.+|..+ -+|++.+||.|+.++-+|+||-
T Consensus 107 ~~~W~Lr~~d~Pe~~~~~~v~~r~~~~~~i~~~~~~~~~fl~~lGy~~---~~Eyv~~G~~F~~g~i~I~l~r 176 (250)
T PF09637_consen 107 SQPWTLRYSDIPEAGKNRPVTVRTIIESTIVGTSGSLLSFLNELGYRF---DYEYVVEGYRFFKGDIVIELFR 176 (250)
T ss_dssp SSSEEEEEEE--GCCSTTSSEEEEEEEEEEEESSSSHHHHHHHTTEEE---EEEEEEEEEEEEECCEEEEEEE
T ss_pred CCcEEEEEecCCCCCCCCceeEEEEEEEEEecCCCCHHHHHHHcCCce---EEEEEEEEEEEEECCEEEEEEE
Confidence 3457777877653211111111111 1222 4566889999999554 5789999999999887777654
No 138
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=24.07 E-value=42 Score=28.24 Aligned_cols=36 Identities=33% Similarity=0.439 Sum_probs=24.9
Q ss_pred eCCccCCCCCcHHHHHHHHHch-------hhCCCcEEEecCCcc
Q 044282 27 LGDYVDRGKQSLETICLLLAYK-------IKYPENFFLLRGNHE 63 (275)
Q Consensus 27 LGD~VDRG~~s~evl~ll~~lk-------~~~p~~v~llrGNHE 63 (275)
+||.|.||..++|-|.--.... +-+|+++.++. ||=
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nhv 51 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NHI 51 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-ccC
Confidence 7999999999999775432221 33677776665 773
No 139
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.68 E-value=39 Score=24.30 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=18.5
Q ss_pred CCccCCCCCcHHHHHHHHHchh
Q 044282 28 GDYVDRGKQSLETICLLLAYKI 49 (275)
Q Consensus 28 GD~VDRG~~s~evl~ll~~lk~ 49 (275)
-|++++|-+|+.++.++-.++.
T Consensus 22 eNLi~~GLDSiR~M~L~~~wR~ 43 (74)
T COG3433 22 ENLIDYGLDSIRMMALLERWRK 43 (74)
T ss_pred hhHHHhchhHHHHHHHHHHHHH
Confidence 3688999999999999977763
No 140
>COG3309 VapD Uncharacterized virulence-associated protein D [Function unknown]
Probab=23.33 E-value=1.4e+02 Score=22.44 Aligned_cols=38 Identities=21% Similarity=0.363 Sum_probs=27.4
Q ss_pred HHHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHH
Q 044282 6 YSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLA 46 (275)
Q Consensus 6 ~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 46 (275)
|+|+.++|+..||....--|.||| +|-..+..+.-++.
T Consensus 25 Y~Dir~~L~~~gF~~tQGSVYl~~---~~i~~~~~~~~~q~ 62 (96)
T COG3309 25 YDDIRRVLERHGFENTQGSVYLND---EGINQAAGTLAAQN 62 (96)
T ss_pred HHHHHHHHHHcCcccccceEEEcc---chHHHHHHHHHHHH
Confidence 688999999999988777788887 66555444444433
No 141
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=22.84 E-value=71 Score=28.56 Aligned_cols=39 Identities=28% Similarity=0.374 Sum_probs=24.7
Q ss_pred eEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCCccc
Q 044282 23 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 64 (275)
Q Consensus 23 ~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~ 64 (275)
+++|+||+|.+.-. .-+...|-.+|.+++..+.+. |=|.
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 47999999987332 123455666777777665554 4444
No 142
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.59 E-value=64 Score=26.74 Aligned_cols=45 Identities=20% Similarity=0.326 Sum_probs=29.1
Q ss_pred eChHHHHHHHHhC---------CCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCC
Q 044282 164 FGADKVTDFLQKH---------DLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFD 214 (275)
Q Consensus 164 fg~~~~~~fl~~~---------~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~~~~~ 214 (275)
-.++..+.||.+- ++..-|||+-+++..+.+..+ +.+|.||.+.+
T Consensus 22 ~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CG 75 (158)
T PF10083_consen 22 KNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCG 75 (158)
T ss_pred cCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCC
Confidence 3445566777665 566678999887654444333 66999996433
No 143
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=22.53 E-value=2.9e+02 Score=21.82 Aligned_cols=52 Identities=12% Similarity=0.094 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEeCCccCCCCCcHHHHHHHHHchhhCCCcEEEecCC
Q 044282 7 SDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 61 (275)
Q Consensus 7 ~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~llrGN 61 (275)
+.|.++|...|+.+.+.+|+-++-=.+|..+..++.+|..+- + .+|.++-|-
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G--~-~~v~ildGG 132 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCG--H-PDVAILDGG 132 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcC--C-CCeEEeCCC
Confidence 578999999999988888887652123444555443332221 2 367776663
No 144
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=21.48 E-value=2.1e+02 Score=28.81 Aligned_cols=62 Identities=21% Similarity=0.183 Sum_probs=37.3
Q ss_pred HHHHHHHhcCCCC--CCeEEEeCCcc--CCCCCcHHHHHH----HHHc-hhhCCC-cEEEecCCccccchhh
Q 044282 8 DLLRLFEYGGLPP--KANYLFLGDYV--DRGKQSLETICL----LLAY-KIKYPE-NFFLLRGNHECASINR 69 (275)
Q Consensus 8 ~L~~ll~~~g~~~--~~~~vfLGD~V--DRG~~s~evl~l----l~~l-k~~~p~-~v~llrGNHE~~~i~~ 69 (275)
.+..+|+.+.-.. -+-++-.||++ |+++++.+...- +..+ ...+|+ -|+...||||-.-.|.
T Consensus 196 lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 196 LIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 3455555544322 34455699999 667766544332 2222 223554 7899999999987764
No 145
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=21.36 E-value=1e+02 Score=25.80 Aligned_cols=46 Identities=22% Similarity=0.325 Sum_probs=28.8
Q ss_pred CCCeEEEeCCccCCC--C-----CcH-HHHHHHHHchhhCCCcEEEecCCccccc
Q 044282 20 PKANYLFLGDYVDRG--K-----QSL-ETICLLLAYKIKYPENFFLLRGNHECAS 66 (275)
Q Consensus 20 ~~~~~vfLGD~VDRG--~-----~s~-evl~ll~~lk~~~p~~v~llrGNHE~~~ 66 (275)
..+.+|++||++|-- . ... +.+..++.+ ......++.+.||||...
T Consensus 30 ~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~v~~v~GNHD~~~ 83 (217)
T cd07398 30 EADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRL-ADRGTRVYYVPGNHDFLL 83 (217)
T ss_pred CCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHH-HHCCCeEEEECCCchHHH
Confidence 557899999999841 1 111 221223222 234568999999999864
No 146
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=21.35 E-value=1.8e+02 Score=25.42 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=29.2
Q ss_pred HHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCC
Q 044282 169 VTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYC 210 (275)
Q Consensus 169 ~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itifSa~~y~ 210 (275)
+...|-..|+++||-+|..+..+++.+ ++++| +||-=|+.
T Consensus 208 ~a~~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNfi 247 (250)
T PF09587_consen 208 LARALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCcccc
Confidence 334444479999999999999999988 44444 57765553
No 147
>PLN02965 Probable pheophorbidase
Probab=20.69 E-value=3.3e+02 Score=23.27 Aligned_cols=21 Identities=10% Similarity=0.191 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCC--ceEEEeeee
Q 044282 167 DKVTDFLQKHDL--DLVCRAHQV 187 (275)
Q Consensus 167 ~~~~~fl~~~~~--~~iirgH~~ 187 (275)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 347889999875 799999986
No 148
>PF05413 Peptidase_C34: Putative closterovirus papain-like endopeptidase; InterPro: IPR008744 RNA-directed RNA polymerase (RdRp) (2.7.7.48 from EC) is an essential protein encoded in the genomes of all RNA containing viruses with no DNA stage [, ]. It catalyses synthesis of the RNA strand complementary to a given RNA template, but the precise molecular mechanism remains unclear. The postulated RNA replication process is a two-step mechanism. First, the initiation step of RNA synthesis begins at or near the 3' end of the RNA template by means of a primer-independent (de novo) mechanism. The de novo initiation consists in the addition of a nucleotide tri-phosphate (NTP) to the 3'-OH of the first initiating NTP. During the following so-called elongation phase, this nucleotidyl transfer reaction is repeated with subsequent NTPs to generate the complementary RNA product []. All the RNA-directed RNA polymerases, and many DNA-directed polymerases, employ a fold whose organisation has been likened to the shape of a right hand with three subdomains termed fingers, palm and thumb []. Only the catalytic palm subdomain, composed of a four-stranded antiparallel beta-sheet with two alpha-helices, is well conserved among all of these enzymes. In RdRp, the palm subdomain comprises three well conserved motifs (A, B and C). Motif A (D-x(4,5)-D) and motif C (GDD) are spatially juxtaposed; the Asp residues of these motifs are implied in the binding of Mg2+ and/or Mn2+. The Asn residue of motif B is involved in selection of ribonucleoside triphosphates over dNTPs and thus determines whether RNA is synthesised rather than DNA []. The domain organisation [] and the 3D structure of the catalytic centre of a wide range of RdPp's, even those with a low overall sequence homology, are conserved. The catalytic centre is formed by several motifs containing a number of conserved amino acid residues. There are 4 superfamilies of viruses that cover all RNA containing viruses with no DNA stage: Viruses containing positive-strand RNA or double-strand RNA, except retroviruses and Birnaviridae: viral RNA-directed RNA polymerases including all positive-strand RNA viruses with no DNA stage, double-strand RNA viruses, and the Cystoviridae, Reoviridae, Hypoviridae, Partitiviridae, Totiviridae families. Mononegavirales (negative-strand RNA viruses with non-segmented genomes). Negative-strand RNA viruses with segmented genomes, i.e. Orthomyxoviruses (including influenza A, B, and C viruses, Thogotoviruses, and the infectious salmon anemia virus), Arenaviruses, Bunyaviruses, Hantaviruses, Nairoviruses, Phleboviruses, Tenuiviruses and Tospoviruses. Birnaviridae family of dsRNA viruses. The RNA-directed RNA polymerases in the first of the above superfamilies can be divided into the following three subgroups: All positive-strand RNA eukaryotic viruses with no DNA stage. All RNA-containing bacteriophages -there are two families of RNA-containing bacteriophages: Leviviridae (positive ssRNA phages) and Cystoviridae (dsRNA phages). Reoviridae family of dsRNA viruses. This signature is found in the RNA-direct RNA polymerase of apple chlorotic leaf spot virus and cherry mottle virus.; GO: 0003723 RNA binding, 0003968 RNA-directed RNA polymerase activity, 0005524 ATP binding, 0019079 viral genome replication
Probab=20.22 E-value=48 Score=24.33 Aligned_cols=10 Identities=60% Similarity=0.800 Sum_probs=7.7
Q ss_pred cEEEecCCcc
Q 044282 54 NFFLLRGNHE 63 (275)
Q Consensus 54 ~v~llrGNHE 63 (275)
.-.+|||||=
T Consensus 79 Gr~~LRGNHF 88 (92)
T PF05413_consen 79 GRMLLRGNHF 88 (92)
T ss_pred hheeecccce
Confidence 4568999994
Done!