Your job contains 1 sequence.
>044287
MESDTKFVVSKMVDNTGAAGAGASSDDGGIKEQERLLPIANVGRIMKQILPANAKISKEA
KETMQECVSEFISFITSEASEKCRKERRKTVNGDDICWALGTLGFDDYAGPIRRYLHKYR
ELEGERANQQDKASNSNSNININEEREEPAGSSYGADDEQITRNQALASISFKSNVNERS
NSFNSRRY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044287
(188 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043293 - symbol:NF-YB5 ""nuclear factor Y, su... 438 2.8e-41 1
TAIR|locus:2054095 - symbol:NF-YB7 ""nuclear factor Y, su... 390 3.5e-36 1
TAIR|locus:2168983 - symbol:NF-YB2 ""nuclear factor Y, su... 387 7.2e-36 1
TAIR|locus:2129885 - symbol:NF-YB3 ""nuclear factor Y, su... 384 1.5e-35 1
TAIR|locus:2036064 - symbol:NF-YB4 ""nuclear factor Y, su... 378 6.5e-35 1
TAIR|locus:2083941 - symbol:NF-YB10 ""nuclear factor Y, s... 371 3.6e-34 1
TAIR|locus:2061789 - symbol:NF-YB8 ""nuclear factor Y, su... 365 1.5e-33 1
TAIR|locus:2169028 - symbol:NF-YB6 ""nuclear factor Y, su... 355 1.8e-32 1
DICTYBASE|DDB_G0279419 - symbol:nfyB "putative histone-li... 327 2.3e-29 1
UNIPROTKB|E1C5G6 - symbol:NFYB "Nuclear transcription fac... 323 4.4e-29 1
UNIPROTKB|P25207 - symbol:NFYB "Nuclear transcription fac... 323 4.4e-29 1
UNIPROTKB|Q32KW0 - symbol:NFYB "Nuclear transcription fac... 323 4.4e-29 1
UNIPROTKB|E2RDU1 - symbol:NFYB "Uncharacterized protein" ... 323 4.4e-29 1
UNIPROTKB|P25208 - symbol:NFYB "Nuclear transcription fac... 323 4.4e-29 1
UNIPROTKB|F1SG36 - symbol:NFYB "Uncharacterized protein" ... 323 4.4e-29 1
MGI|MGI:97317 - symbol:Nfyb "nuclear transcription factor... 323 4.4e-29 1
RGD|3172 - symbol:Nfyb "nuclear transcription factor-Y be... 323 4.4e-29 1
UNIPROTKB|F1M6L1 - symbol:Nfyb "Nuclear transcription fac... 323 4.4e-29 1
UNIPROTKB|H7C5X4 - symbol:Nfyb "Nuclear transcription fac... 323 4.4e-29 1
ZFIN|ZDB-GENE-050306-25 - symbol:nfybb "nuclear transcrip... 322 5.6e-29 1
CGD|CAL0000086 - symbol:HAP31 species:5476 "Candida albic... 321 7.1e-29 1
UNIPROTKB|Q5A6N7 - symbol:HAP31 "Potential histone-like t... 321 7.1e-29 1
ZFIN|ZDB-GENE-050417-13 - symbol:nfyba "nuclear transcrip... 319 1.2e-28 1
TAIR|locus:2201163 - symbol:LEC1 "LEAFY COTYLEDON 1" spec... 313 5.0e-28 1
POMBASE|SPAC23C11.08 - symbol:php3 "CCAAT-binding factor ... 298 1.9e-26 1
SGD|S000000117 - symbol:HAP3 "Subunit of the Hap2p/3p/4p/... 294 5.2e-26 1
GENEDB_PFALCIPARUM|PF11_0477 - symbol:PF11_0477 "CCAAT-bo... 306 7.3e-26 1
UNIPROTKB|F8VSL3 - symbol:NFYB "Nuclear transcription fac... 280 1.6e-24 1
FB|FBgn0032816 - symbol:Nf-YB "Nuclear factor Y-box B" sp... 279 2.0e-24 1
WB|WBGene00021132 - symbol:nfyb-1 species:6239 "Caenorhab... 264 1.1e-22 1
FB|FBgn0028926 - symbol:NC2beta "Negative Cofactor 2beta"... 183 3.0e-14 1
UNIPROTKB|Q5ZMV3 - symbol:DR1 "Protein Dr1" species:9031 ... 157 3.0e-14 2
RGD|1305201 - symbol:Dr1 "down-regulator of transcription... 157 6.2e-14 2
ZFIN|ZDB-GENE-061013-797 - symbol:dr1 "down-regulator of ... 152 2.1e-13 2
TAIR|locus:2181529 - symbol:NF-YB12 ""nuclear factor Y, s... 169 9.1e-13 1
DICTYBASE|DDB_G0269638 - symbol:dr1 "putative histone-lik... 168 1.2e-12 1
ZFIN|ZDB-GENE-040426-1773 - symbol:pole3 "polymerase (DNA... 162 5.0e-12 1
POMBASE|SPBC30D10.02 - symbol:SPBC30D10.02 "transcription... 160 8.2e-12 1
UNIPROTKB|F1SN88 - symbol:POLE3 "Uncharacterized protein"... 159 1.0e-11 1
UNIPROTKB|G5EHZ6 - symbol:MGCH7_ch7g579 "Negative cofacto... 159 1.0e-11 1
UNIPROTKB|F1P2L0 - symbol:POLE3 "Uncharacterized protein"... 158 1.3e-11 1
UNIPROTKB|Q3SZN5 - symbol:POLE3 "DNA polymerase epsilon s... 158 1.3e-11 1
UNIPROTKB|Q9NRF9 - symbol:POLE3 "DNA polymerase epsilon s... 158 1.3e-11 1
UNIPROTKB|Q5R4W3 - symbol:POLE3 "DNA polymerase epsilon s... 158 1.3e-11 1
TAIR|locus:2178307 - symbol:NF-YB13 ""nuclear factor Y, s... 158 1.3e-11 1
UNIPROTKB|Q2KJ19 - symbol:DR1 "Down-regulator of transcri... 157 1.7e-11 1
UNIPROTKB|E2RR45 - symbol:DR1 "Uncharacterized protein" s... 157 1.7e-11 1
UNIPROTKB|J9P0Z6 - symbol:POLE3 "Uncharacterized protein"... 157 1.7e-11 1
UNIPROTKB|Q01658 - symbol:DR1 "Protein Dr1" species:9606 ... 157 1.7e-11 1
MGI|MGI:1100515 - symbol:Dr1 "down-regulator of transcrip... 157 1.7e-11 1
UNIPROTKB|F1S534 - symbol:DR1 "Uncharacterized protein" s... 156 2.2e-11 1
CGD|CAL0002303 - symbol:NCB2 species:5476 "Candida albica... 154 3.5e-11 1
UNIPROTKB|Q5A0I6 - symbol:NCB2 "Putative uncharacterized ... 154 3.5e-11 1
RGD|1359475 - symbol:Pole3 "polymerase (DNA directed), ep... 154 3.5e-11 1
ASPGD|ASPL0000055867 - symbol:AN9358 species:162425 "Emer... 153 4.5e-11 1
UNIPROTKB|Q8W0W9 - symbol:Dr1 "Repressor protein" species... 156 5.5e-11 1
MGI|MGI:1933378 - symbol:Pole3 "polymerase (DNA directed)... 149 1.2e-10 1
FB|FBgn0043002 - symbol:Chrac-14 "Chromatin accessibility... 148 1.5e-10 1
ASPGD|ASPL0000061732 - symbol:AN1225 species:162425 "Emer... 120 1.9e-08 2
TAIR|locus:2038648 - symbol:NF-YB11 ""nuclear factor Y, s... 114 1.8e-06 2
POMBASE|SPBC3D6.09 - symbol:dpb4 "DNA polymerase epsilon ... 114 1.0e-05 1
DICTYBASE|DDB_G0272222 - symbol:ybl1 "YB-like 1" species:... 102 1.1e-05 1
WB|WBGene00001092 - symbol:dro-1 species:6239 "Caenorhabd... 109 3.8e-05 1
GENEDB_PFALCIPARUM|PF13_0043 - symbol:PF13_0043 "CCAAT-bi... 103 8.1e-05 1
UNIPROTKB|Q8IEN4 - symbol:PF13_0043 "CCAAT-binding transc... 103 8.1e-05 1
SGD|S000002805 - symbol:NCB2 "Subunit of a heterodimeric ... 96 0.00076 1
>TAIR|locus:2043293 [details] [associations]
symbol:NF-YB5 ""nuclear factor Y, subunit B5""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AC005309 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:BT003968
EMBL:BT005081 IPI:IPI00540695 PIR:G84919 RefSeq:NP_182302.1
UniGene:At.36317 ProteinModelPortal:O82248 SMR:O82248 IntAct:O82248
STRING:O82248 PRIDE:O82248 EnsemblPlants:AT2G47810.1 GeneID:819393
KEGG:ath:AT2G47810 GeneFarm:5135 TAIR:At2g47810 InParanoid:O82248
OMA:ICWAMAN PhylomeDB:O82248 ProtClustDB:CLSN2913222
Genevestigator:O82248 GermOnline:AT2G47810 Uniprot:O82248
Length = 160
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 79/103 (76%), Positives = 91/103 (88%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
+KEQ+RLLPIANVGRIMK ILPANAK+SKEAKETMQECVSEFISF+T EAS+KC KE+RK
Sbjct: 49 VKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRK 108
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDK 132
TVNGDDICWA+ LGFDDYA +++YLH+YR LEGE+ N K
Sbjct: 109 TVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGK 151
>TAIR|locus:2054095 [details] [associations]
symbol:NF-YB7 ""nuclear factor Y, subunit B7""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AC007063 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 PANTHER:PTHR11064:SF9 EMBL:DQ446491
EMBL:BT025276 IPI:IPI00548512 PIR:F84508 RefSeq:NP_178981.1
UniGene:At.64924 ProteinModelPortal:Q9SIT9 SMR:Q9SIT9 IntAct:Q9SIT9
EnsemblPlants:AT2G13570.1 GeneID:815843 KEGG:ath:AT2G13570
GeneFarm:5137 TAIR:At2g13570 InParanoid:Q9SIT9 OMA:NKEQDRF
PhylomeDB:Q9SIT9 ProtClustDB:CLSN2913036 ArrayExpress:Q9SIT9
Genevestigator:Q9SIT9 Uniprot:Q9SIT9
Length = 215
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 69/98 (70%), Positives = 86/98 (87%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
KEQ+R LPIANVGRIMK++LP N KISK+AKET+QECVSEFISF+T EAS+KC++E+RKT
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERAN 128
+NGDDI WA+ TLGF+DY P++ YL KYR+ EGE+ N
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVN 132
>TAIR|locus:2168983 [details] [associations]
symbol:NF-YB2 ""nuclear factor Y, subunit B2""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AB025628 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AF385744
EMBL:AY078026 EMBL:Y13724 EMBL:AF250338 IPI:IPI00519534
RefSeq:NP_199575.1 UniGene:At.21494 UniGene:At.71142
ProteinModelPortal:Q9FGJ3 SMR:Q9FGJ3 STRING:Q9FGJ3 PaxDb:Q9FGJ3
PRIDE:Q9FGJ3 EnsemblPlants:AT5G47640.1 GeneID:834815
KEGG:ath:AT5G47640 GeneFarm:5132 TAIR:At5g47640 InParanoid:Q9FGJ3
OMA:YLQRFRE PhylomeDB:Q9FGJ3 ProtClustDB:CLSN2914913
Genevestigator:Q9FGJ3 GermOnline:AT5G47640 Uniprot:Q9FGJ3
Length = 190
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 69/96 (71%), Positives = 86/96 (89%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+R LPIANV RIMK+ LPANAKISK+AKETMQECVSEFISF+T EAS+KC+KE+RKT
Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKT 85
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+NGDD+ WA+ TLGF+DY P++ YL ++RE+EGER
Sbjct: 86 INGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGER 121
>TAIR|locus:2129885 [details] [associations]
symbol:NF-YB3 ""nuclear factor Y, subunit B3""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:Z97336 EMBL:AL161539
eggNOG:COG2036 OMA:NDSGGHK HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:AK117818 EMBL:BT003684 IPI:IPI00516812
PIR:G71407 RefSeq:NP_193190.1 UniGene:At.33269
ProteinModelPortal:O23310 SMR:O23310 IntAct:O23310 STRING:O23310
PaxDb:O23310 PRIDE:O23310 EnsemblPlants:AT4G14540.1 GeneID:827101
KEGG:ath:AT4G14540 GeneFarm:5133 TAIR:At4g14540 InParanoid:O23310
PhylomeDB:O23310 ProtClustDB:CLSN2685335 Genevestigator:O23310
GermOnline:AT4G14540 Uniprot:O23310
Length = 161
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 69/96 (71%), Positives = 86/96 (89%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+R LPIANV RIMK+ LPANAKISK+AKET+QECVSEFISFIT EAS+KC++E+RKT
Sbjct: 20 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+NGDD+ WA+ TLGF+DY P++ YL KYRE+EGE+
Sbjct: 80 INGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEK 115
>TAIR|locus:2036064 [details] [associations]
symbol:NF-YB4 ""nuclear factor Y, subunit B4""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC000106 eggNOG:COG2036 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:BT029363 IPI:IPI00522503 PIR:C86222
RefSeq:NP_172377.1 UniGene:At.64828 ProteinModelPortal:O04027
SMR:O04027 IntAct:O04027 EnsemblPlants:AT1G09030.1 GeneID:837424
KEGG:ath:AT1G09030 GeneFarm:5134 TAIR:At1g09030 InParanoid:O04027
OMA:RERTEHN PhylomeDB:O04027 ProtClustDB:CLSN2912861
ArrayExpress:O04027 Genevestigator:O04027 GermOnline:AT1G09030
Uniprot:O04027
Length = 139
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 70/95 (73%), Positives = 83/95 (87%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+++RLLPIANVGR+MKQILP+NAKISKEAK+T+QEC +EFISF+T EASEKC +E RKTV
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
NGDDI WAL TLG D+YA + R+LHKYRE E ER
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYREAERER 97
>TAIR|locus:2083941 [details] [associations]
symbol:NF-YB10 ""nuclear factor Y, subunit B10""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL132966 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 ProtClustDB:CLSN2681248
EMBL:AK176827 IPI:IPI00539611 PIR:T45874 RefSeq:NP_190902.2
UniGene:At.35203 ProteinModelPortal:Q67XJ2 SMR:Q67XJ2 IntAct:Q67XJ2
PaxDb:Q67XJ2 PRIDE:Q67XJ2 EnsemblPlants:AT3G53340.1 GeneID:824502
KEGG:ath:AT3G53340 GeneFarm:5140 TAIR:At3g53340 InParanoid:Q67XJ2
OMA:QKYREVR PhylomeDB:Q67XJ2 Genevestigator:Q67XJ2
GermOnline:AT3G53340 Uniprot:Q67XJ2
Length = 176
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 64/96 (66%), Positives = 85/96 (88%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+R LPIAN+ RIMK+ LP N KI+K+AKETMQECVSEFISF+TSEAS+KC++E+RK
Sbjct: 27 VREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRK 86
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGE 125
T+NGDD+ WA+ TLGF+DY P++ YL +YRE+EG+
Sbjct: 87 TINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGD 122
>TAIR|locus:2061789 [details] [associations]
symbol:NF-YB8 ""nuclear factor Y, subunit B8""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 EMBL:AC006260
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 EMBL:AY070477
EMBL:AY091673 IPI:IPI00541270 PIR:A84788 RefSeq:NP_001031500.1
RefSeq:NP_850277.2 RefSeq:NP_973617.1 UniGene:At.28391
ProteinModelPortal:Q8VYK4 SMR:Q8VYK4 EnsemblPlants:AT2G37060.1
EnsemblPlants:AT2G37060.2 EnsemblPlants:AT2G37060.3 GeneID:818282
KEGG:ath:AT2G37060 GeneFarm:5138 TAIR:At2g37060 InParanoid:Q8VYK4
OMA:GCGSHES PhylomeDB:Q8VYK4 ProtClustDB:CLSN2681248
Genevestigator:Q8VYK4 GermOnline:AT2G37060 Uniprot:Q8VYK4
Length = 173
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 63/96 (65%), Positives = 85/96 (88%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+R LPIAN+ RIMK+ LPAN KI+K+AKE +QECVSEFISF+TSEAS+KC++E+RK
Sbjct: 28 VREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRK 87
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGE 125
T+NGDD+ WA+ TLGF+DY P++ YL +YRE+EG+
Sbjct: 88 TINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD 123
>TAIR|locus:2169028 [details] [associations]
symbol:NF-YB6 ""nuclear factor Y, subunit B6""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009738 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AB025628 eggNOG:COG2036 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 EMBL:AY138461 EMBL:BT004183 IPI:IPI00522576
IPI:IPI00655434 RefSeq:NP_001078727.1 RefSeq:NP_199578.2
UniGene:At.29883 UniGene:At.49140 ProteinModelPortal:Q84W66
SMR:Q84W66 IntAct:Q84W66 STRING:Q84W66 EnsemblPlants:AT5G47670.1
GeneID:834818 KEGG:ath:AT5G47670 GeneFarm:5136 TAIR:At5g47670
InParanoid:Q84W66 OMA:TEYGAYG PhylomeDB:Q84W66
ProtClustDB:CLSN2680471 Genevestigator:Q84W66 GermOnline:AT5G47670
Uniprot:Q84W66
Length = 234
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 62/97 (63%), Positives = 84/97 (86%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+R +PIANV RIM++ILPA+AKIS ++KET+QECVSE+ISFIT EA+E+C++E+RK
Sbjct: 56 VREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRK 115
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
T+ +D+ WA+ LGFDDY P+ YLH+YRELEGER
Sbjct: 116 TITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152
>DICTYBASE|DDB_G0279419 [details] [associations]
symbol:nfyB "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 dictyBase:DDB_G0279419 GenomeReviews:CM000152_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006366 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AAFI02000031 eggNOG:COG2036 GO:GO:0016602
RefSeq:XP_641617.1 HSSP:P25208 ProteinModelPortal:Q54WV0 SMR:Q54WV0
EnsemblProtists:DDB0220099 GeneID:8622023 KEGG:ddi:DDB_G0279419
InParanoid:Q54WV0 OMA:SLHNSGN ProtClustDB:CLSZ2846666
Uniprot:Q54WV0
Length = 490
Score = 327 (120.2 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 61/100 (61%), Positives = 84/100 (84%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+R LPIAN+ RIMK+ LP NAK++K+AKET+Q+CVSEFISFITSEAS+KC++E+RKT
Sbjct: 47 REQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKT 106
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQ 130
+NG+DI A+ +LGF++Y P++ YL KYRE E N++
Sbjct: 107 INGEDIIAAMVSLGFENYVEPLKVYLLKYRETEKNSNNKR 146
>UNIPROTKB|E1C5G6 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 GeneTree:ENSGT00550000074689 GO:GO:0016602
PANTHER:PTHR11064:SF9 EMBL:AADN02006311 EMBL:AADN02006310
IPI:IPI00596965 Ensembl:ENSGALT00000037650 ArrayExpress:E1C5G6
Uniprot:E1C5G6
Length = 152
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>UNIPROTKB|P25207 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:AJ719889 EMBL:X59713
IPI:IPI00820911 PIR:S24469 RefSeq:NP_990600.1 UniGene:Gga.1264
ProteinModelPortal:P25207 SMR:P25207 STRING:P25207
Ensembl:ENSGALT00000020762 Ensembl:ENSGALT00000037651 GeneID:396205
KEGG:gga:396205 InParanoid:P25207 NextBio:20816257
ArrayExpress:P25207 Uniprot:P25207
Length = 205
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>UNIPROTKB|Q32KW0 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9913 "Bos taurus" [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
EMBL:BC109900 IPI:IPI01002647 RefSeq:NP_001073254.1
UniGene:Bt.63176 ProteinModelPortal:Q32KW0 SMR:Q32KW0 STRING:Q32KW0
Ensembl:ENSBTAT00000043454 GeneID:614382 KEGG:bta:614382 CTD:4801
HOVERGEN:HBG008864 InParanoid:Q32KW0 KO:K08065 OMA:KENFREQ
OrthoDB:EOG4D52ZM NextBio:20899084 ArrayExpress:Q32KW0
Uniprot:Q32KW0
Length = 207
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|E2RDU1 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070491 "repressing transcription factor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016602
"CCAAT-binding factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 KO:K08065 OMA:KENFREQ
EMBL:AAEX03009996 RefSeq:XP_003432091.1 Ensembl:ENSCAFT00000050062
GeneID:475450 KEGG:cfa:475450 NextBio:20851292 Uniprot:E2RDU1
Length = 205
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>UNIPROTKB|P25208 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0016602 "CCAAT-binding
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
EMBL:CH471054 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OMA:KENFREQ OrthoDB:EOG4D52ZM EMBL:L06145 EMBL:X59710 EMBL:AK291934
EMBL:BC005316 EMBL:BC005317 EMBL:BC007035 IPI:IPI00013217
PIR:S22817 RefSeq:NP_006157.1 UniGene:Hs.84928 PDB:1N1J PDBsum:1N1J
ProteinModelPortal:P25208 SMR:P25208 IntAct:P25208 MINT:MINT-146867
STRING:P25208 PhosphoSite:P25208 DMDM:399193 PaxDb:P25208
PRIDE:P25208 DNASU:4801 Ensembl:ENST00000240055
Ensembl:ENST00000551727 GeneID:4801 KEGG:hsa:4801 UCSC:uc001tkl.1
GeneCards:GC12M104510 HGNC:HGNC:7805 HPA:CAB004211 MIM:189904
neXtProt:NX_P25208 PharmGKB:PA31610 InParanoid:P25208
PhylomeDB:P25208 ChiTaRS:NFYB EvolutionaryTrace:P25208
GenomeRNAi:4801 NextBio:18506 ArrayExpress:P25208 Bgee:P25208
CleanEx:HS_NFYB Genevestigator:P25208 GermOnline:ENSG00000120837
Uniprot:P25208
Length = 207
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|F1SG36 [details] [associations]
symbol:NFYB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016602 "CCAAT-binding factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 GO:GO:0045893
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GeneTree:ENSGT00550000074689 GO:GO:0016602 PANTHER:PTHR11064:SF9
CTD:4801 KO:K08065 OMA:KENFREQ EMBL:CU457468 RefSeq:NP_001138402.1
UniGene:Ssc.54110 Ensembl:ENSSSCT00000000919 GeneID:100157587
KEGG:ssc:100157587 ArrayExpress:F1SG36 Uniprot:F1SG36
Length = 207
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>MGI|MGI:97317 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0016602 "CCAAT-binding factor
complex" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] Reactome:REACT_112621
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
MGI:MGI:97317 GO:GO:0045893 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
GO:GO:0016602 PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864
KO:K08065 OMA:KENFREQ EMBL:X55316 EMBL:AK010762 EMBL:AK146168
EMBL:BC010719 IPI:IPI00753226 PIR:F38245 RefSeq:NP_035044.1
UniGene:Mm.245998 ProteinModelPortal:P63139 SMR:P63139
STRING:P63139 PhosphoSite:P63139 PRIDE:P63139 DNASU:18045
Ensembl:ENSMUST00000130911 GeneID:18045 KEGG:mmu:18045
UCSC:uc007gjv.1 InParanoid:P63139 NextBio:293161 Bgee:P63139
CleanEx:MM_NFYB Genevestigator:P63139 GermOnline:ENSMUSG00000020248
Uniprot:P63139
Length = 207
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>RGD|3172 [details] [associations]
symbol:Nfyb "nuclear transcription factor-Y beta" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA;ISO] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 GO:GO:0016602 HOGENOM:HOG000211832
PANTHER:PTHR11064:SF9 CTD:4801 HOVERGEN:HBG008864 KO:K08065
OrthoDB:EOG4D52ZM EMBL:M55045 EMBL:BC089791 IPI:IPI00208278
PIR:A23692 RefSeq:NP_113741.1 UniGene:Rn.90077
ProteinModelPortal:P63140 SMR:P63140 DIP:DIP-2660N STRING:P63140
Ensembl:ENSRNOT00000066143 GeneID:25336 KEGG:rno:25336 UCSC:RGD:3172
InParanoid:P63140 NextBio:606231 ArrayExpress:P63140
Genevestigator:P63140 GermOnline:ENSRNOG00000010309 Uniprot:P63140
Length = 207
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|F1M6L1 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
IPI:IPI00949385 Ensembl:ENSRNOT00000067075 ArrayExpress:F1M6L1
Uniprot:F1M6L1
Length = 207
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 53 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 112
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 113 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>UNIPROTKB|H7C5X4 [details] [associations]
symbol:Nfyb "Nuclear transcription factor Y subunit beta"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 RGD:3172 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
ProteinModelPortal:H7C5X4 Ensembl:ENSRNOT00000014122 Uniprot:H7C5X4
Length = 205
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 51 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 111 INGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>ZFIN|ZDB-GENE-050306-25 [details] [associations]
symbol:nfybb "nuclear transcription factor Y, beta
b" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050306-25
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:BX323444 EMBL:BC090693
IPI:IPI00512171 RefSeq:NP_001013340.1 UniGene:Dr.151645 SMR:Q5CZV3
STRING:Q5CZV3 Ensembl:ENSDART00000067072 GeneID:503744
KEGG:dre:503744 CTD:503744 InParanoid:Q5CZV3 NextBio:20866288
Uniprot:Q5CZV3
Length = 205
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 60/98 (61%), Positives = 80/98 (81%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RK
Sbjct: 51 LREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRK 110
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
T+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 111 TINGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEK 148
>CGD|CAL0000086 [details] [associations]
symbol:HAP31 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0016602 "CCAAT-binding factor complex" evidence=IEA]
[GO:0043457 "regulation of cellular respiration" evidence=IEA]
[GO:0000436 "carbon catabolite activation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 61/92 (66%), Positives = 77/92 (83%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+R LPIANV RIMK LP AK+SK+AKE MQECVSEFISFITSEAS+KC KE+RK
Sbjct: 11 LREQDRWLPIANVARIMKNTLPPTAKVSKDAKECMQECVSEFISFITSEASDKCLKEKRK 70
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRE 121
T+NG+DI +++ LGF++YA ++ YL KYRE
Sbjct: 71 TINGEDILYSMYDLGFENYAEVLKIYLAKYRE 102
>UNIPROTKB|Q5A6N7 [details] [associations]
symbol:HAP31 "Potential histone-like transcription factor"
species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
CGD:CAL0000086 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0071280 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG2036
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 RefSeq:XP_717380.1
RefSeq:XP_717470.1 ProteinModelPortal:Q5A6N7 SMR:Q5A6N7
STRING:Q5A6N7 GeneID:3640853 GeneID:3640994 KEGG:cal:CaO19.517
KEGG:cal:CaO19.8148 Uniprot:Q5A6N7
Length = 105
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 61/92 (66%), Positives = 77/92 (83%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+R LPIANV RIMK LP AK+SK+AKE MQECVSEFISFITSEAS+KC KE+RK
Sbjct: 11 LREQDRWLPIANVARIMKNTLPPTAKVSKDAKECMQECVSEFISFITSEASDKCLKEKRK 70
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRE 121
T+NG+DI +++ LGF++YA ++ YL KYRE
Sbjct: 71 TINGEDILYSMYDLGFENYAEVLKIYLAKYRE 102
>ZFIN|ZDB-GENE-050417-13 [details] [associations]
symbol:nfyba "nuclear transcription factor Y, beta
a" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 ZFIN:ZDB-GENE-050417-13
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9 HOVERGEN:HBG008864
KO:K08065 OrthoDB:EOG4D52ZM EMBL:FP236856 EMBL:BC092926
IPI:IPI00490399 RefSeq:NP_001017565.1 UniGene:Dr.31402 SMR:Q561X4
Ensembl:ENSDART00000057254 GeneID:550227 KEGG:dre:550227 CTD:550227
InParanoid:Q561X4 OMA:IPQTGKX NextBio:20879490 Uniprot:Q561X4
Length = 204
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 60/97 (61%), Positives = 79/97 (81%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 51 REQDIYLPIANVARIMKNAVPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 110
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRE-LEGER 126
+NG+DI +A+ TLGFD Y P++ YL K+RE ++GE+
Sbjct: 111 INGEDILFAMSTLGFDMYVEPLKLYLQKFREAMKGEK 147
>TAIR|locus:2201163 [details] [associations]
symbol:LEC1 "LEAFY COTYLEDON 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010262 "somatic
embryogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009785 "blue light signaling pathway"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA;IDA;IMP]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045893 GO:GO:0009738 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0010262 GO:GO:0045723 eggNOG:COG2036 GO:GO:0009785
EMBL:AC013482 HOGENOM:HOG000211832 PANTHER:PTHR11064:SF9
EMBL:AB493474 EMBL:BX817269 EMBL:AF036684 IPI:IPI00542473
PIR:G86352 RefSeq:NP_173616.2 UniGene:At.28011
ProteinModelPortal:Q9SFD8 SMR:Q9SFD8 IntAct:Q9SFD8 STRING:Q9SFD8
PaxDb:Q9SFD8 PRIDE:Q9SFD8 EnsemblPlants:AT1G21970.1 GeneID:838800
KEGG:ath:AT1G21970 GeneFarm:5139 TAIR:At1g21970 InParanoid:Q9SFD8
OMA:INGMPAF Genevestigator:Q9SFD8 GermOnline:AT1G21970
Uniprot:Q9SFD8
Length = 238
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 53/98 (54%), Positives = 82/98 (83%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ++ +PIANV RIM++ LP++AKIS +AKET+QECVSE+ISF+T EA+E+C++E+RKT
Sbjct: 58 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 117
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERAN 128
+ +DI WA+ LGFD+Y P+ ++++YRE+E +R +
Sbjct: 118 ITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGS 155
>POMBASE|SPAC23C11.08 [details] [associations]
symbol:php3 "CCAAT-binding factor complex subunit Php3"
species:4896 "Schizosaccharomyces pombe" [GO:0000785 "chromatin"
evidence=NAS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO;TAS] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0016602 "CCAAT-binding
factor complex" evidence=ISO] [GO:0031670 "cellular response to
nutrient" evidence=IC] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:1900402 "regulation of carbohydrate
metabolic process by regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR003956
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685 PomBase:SPAC23C11.08
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000785 GO:GO:0000978
GO:GO:0001077 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0031670
eggNOG:COG2036 GO:GO:0016602 EMBL:X75072 PIR:S42744
RefSeq:NP_593639.1 ProteinModelPortal:P36611 SMR:P36611
STRING:P36611 EnsemblFungi:SPAC23C11.08.1 GeneID:2542027
KEGG:spo:SPAC23C11.08 HOGENOM:HOG000211832 OMA:XDEDEER
OrthoDB:EOG4N33Z8 NextBio:20803105 GO:GO:1900402
PANTHER:PTHR11064:SF9 Uniprot:P36611
Length = 116
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 57/96 (59%), Positives = 75/96 (78%)
Query: 36 LLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDD 95
LLPIANV RIMK LP NAKISKEAK+ +Q+CVSEFISF+T EASE+C +E+RKT+ G+D
Sbjct: 11 LLPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGED 70
Query: 96 ICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQD 131
+ AL TLGF++YA ++ L KYRE + A+ ++
Sbjct: 71 VLLALNTLGFENYAEVLKISLTKYREQQARSASMKE 106
>SGD|S000000117 [details] [associations]
symbol:HAP3 "Subunit of the Hap2p/3p/4p/5p CCAAT-binding
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016602
"CCAAT-binding factor complex" evidence=IDA;IPI] [GO:0000436
"carbon catabolite activation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0043457 "regulation of cellular respiration"
evidence=IMP] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003956 InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 PROSITE:PS00685
SGD:S000000117 GO:GO:0043565 GO:GO:0006351 EMBL:BK006936
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 GO:GO:0043457
GeneTree:ENSGT00550000074689 GO:GO:0000436 GO:GO:0016602
HOGENOM:HOG000211832 OrthoDB:EOG4N33Z8 PANTHER:PTHR11064:SF9
EMBL:M20318 EMBL:X74544 EMBL:Z35782 EMBL:AY558459 PIR:A28123
RefSeq:NP_009532.1 ProteinModelPortal:P13434 SMR:P13434
DIP:DIP-1362N IntAct:P13434 MINT:MINT-567883 STRING:P13434
PaxDb:P13434 EnsemblFungi:YBL021C GeneID:852260 KEGG:sce:YBL021C
CYGD:YBL021c OMA:NYIEPLK NextBio:970850 Genevestigator:P13434
GermOnline:YBL021C Uniprot:P13434
Length = 144
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+R LPI NV R+MK LP +AK+SK+AKE MQECVSE ISF+TSEAS++C ++RK
Sbjct: 35 LREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAADKRK 94
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRE---LEGERANQQD 131
T+NG+DI +L LGF++YA ++ YL KYR+ L+ + +QD
Sbjct: 95 TINGEDILISLHALGFENYAEVLKIYLAKYRQQQALKNQLMYEQD 139
>GENEDB_PFALCIPARUM|PF11_0477 [details] [associations]
symbol:PF11_0477 "CCAAT-box DNA binding protein
subunit B" species:5833 "Plasmodium falciparum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 PRINTS:PR00615 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AE014186 HSSP:P25208
RefSeq:XP_001348144.1 ProteinModelPortal:Q8IHQ2 SMR:Q8IHQ2
IntAct:Q8IHQ2 MINT:MINT-1610835 EnsemblProtists:PF11_0477:mRNA
GeneID:811020 KEGG:pfa:PF11_0477 EuPathDB:PlasmoDB:PF3D7_1146600
OMA:TNETNQT Uniprot:Q8IHQ2
Length = 1301
Score = 306 (112.8 bits), Expect = 7.3e-26, P = 7.3e-26
Identities = 61/156 (39%), Positives = 102/156 (65%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ E LLPIAN+ RIMK+ILP +AK++KE+K+ ++ECV+EFI F+TSEAS++C +E+RKT+
Sbjct: 1129 DSETLLPIANISRIMKRILPGSAKVAKESKDIIRECVTEFIQFLTSEASDRCTREKRKTI 1188
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDKAXXXXXXXXXXEEREEPAG 151
NG+DI +++ LGF+DY P+ YL+K+++L+ E N + EE +
Sbjct: 1189 NGEDILYSMEKLGFNDYIEPLTEYLNKWKQLK-ELNNSNNYHEKKFDNIKKTEESGDLNN 1247
Query: 152 SSYGADDEQITRNQ-ALASISFKSNV-NERSNSFNS 185
++ +++ + N A + +NV N+++ F S
Sbjct: 1248 NNNSVENKNLDENAYAEENYPIMNNVYNDQNEIFES 1283
>UNIPROTKB|F8VSL3 [details] [associations]
symbol:NFYB "Nuclear transcription factor Y subunit beta"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003956 InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
PROSITE:PS00685 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR11064:SF9
HGNC:HGNC:7805 ChiTaRS:NFYB EMBL:AC089983 IPI:IPI01021893
ProteinModelPortal:F8VSL3 SMR:F8VSL3 Ensembl:ENST00000551446
ArrayExpress:F8VSL3 Bgee:F8VSL3 Uniprot:F8VSL3
Length = 131
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 52/78 (66%), Positives = 65/78 (83%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
+EQ+ LPIANV RIMK +P KI+K+AKE +QECVSEFISFITSEASE+C +E+RKT
Sbjct: 54 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 113
Query: 91 VNGDDICWALGTLGFDDY 108
+NG+DI +A+ TLGFD Y
Sbjct: 114 INGEDILFAMSTLGFDSY 131
>FB|FBgn0032816 [details] [associations]
symbol:Nf-YB "Nuclear factor Y-box B" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0016602
"CCAAT-binding factor complex" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615
GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 eggNOG:COG2036 GeneTree:ENSGT00550000074689
PANTHER:PTHR11064:SF9 HSSP:P25208 EMBL:AY070968 EMBL:AY094930
RefSeq:NP_609997.1 UniGene:Dm.6186 SMR:Q8ST61 IntAct:Q8ST61
MINT:MINT-940508 STRING:Q8ST61 EnsemblMetazoa:FBtr0081289
GeneID:35261 KEGG:dme:Dmel_CG10447 UCSC:CG10447-RA CTD:35261
FlyBase:FBgn0032816 InParanoid:Q8ST61 OMA:LPICNII OrthoDB:EOG4RFJ8X
GenomeRNAi:35261 NextBio:792674 Uniprot:Q8ST61
Length = 156
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 54/92 (58%), Positives = 69/92 (75%)
Query: 30 IKEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
++EQ+R LPI N+ +IMK +P N KI+K+A+E +QECVSEFISFI+SEA E+ E RK
Sbjct: 36 LREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRK 95
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYLHKYRE 121
TVNGDD+ A LGFD+Y P+ YL KYRE
Sbjct: 96 TVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRE 127
>WB|WBGene00021132 [details] [associations]
symbol:nfyb-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 PRINTS:PR00615 GO:GO:0043565
GO:GO:0005622 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GeneTree:ENSGT00550000074689 PANTHER:PTHR11064:SF9 HSSP:P25208
EMBL:FO080661 PIR:E88021 RefSeq:NP_493740.1
ProteinModelPortal:O17286 SMR:O17286 DIP:DIP-25261N IntAct:O17286
MINT:MINT-1048257 STRING:O17286 PaxDb:O17286 EnsemblMetazoa:W10D9.4
GeneID:173435 KEGG:cel:CELE_W10D9.4 UCSC:W10D9.4 CTD:173435
WormBase:W10D9.4 InParanoid:O17286 NextBio:879647 Uniprot:O17286
Length = 403
Score = 264 (98.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 52/90 (57%), Positives = 66/90 (73%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+QER LPIANV RIMK + AK++K+AKE QECVSEFISFI SEA+E C +RKT+
Sbjct: 61 DQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTI 120
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRE 121
DD+ A+ GFD+YA P+R +L KYR+
Sbjct: 121 TADDLLTAMEATGFDNYAEPMRIFLQKYRQ 150
>FB|FBgn0028926 [details] [associations]
symbol:NC2beta "Negative Cofactor 2beta" species:7227
"Drosophila melanogaster" [GO:0017055 "negative regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=NAS] [GO:0017054 "negative cofactor 2 complex"
evidence=NAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001075 "RNA
polymerase II core promoter sequence-specific DNA binding
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0045944
GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0042766 GO:GO:0051123 eggNOG:COG5150 PANTHER:PTHR11064:SF8
GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AF302257
EMBL:AY060717 EMBL:DQ138728 RefSeq:NP_609736.1 UniGene:Dm.3397
ProteinModelPortal:Q9VJQ5 SMR:Q9VJQ5 IntAct:Q9VJQ5 MINT:MINT-823185
STRING:Q9VJQ5 PaxDb:Q9VJQ5 EnsemblMetazoa:FBtr0080695 GeneID:34875
KEGG:dme:Dmel_CG4185 UCSC:CG4185-RA CTD:34875 FlyBase:FBgn0028926
InParanoid:Q9VJQ5 OrthoDB:EOG47WM56 PhylomeDB:Q9VJQ5
GenomeRNAi:34875 NextBio:790647 Bgee:Q9VJQ5 GermOnline:CG4185
Uniprot:Q9VJQ5
Length = 183
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 35/102 (34%), Positives = 60/102 (58%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
++ E LP A++ +I+K+++P +++ E++E + C SEFI I+SEA+E C +KT
Sbjct: 14 EDDELTLPRASINKIIKELVPT-VRVANESRELILNCCSEFIHLISSEANEVCNMRNKKT 72
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDK 132
+N + + AL LGF DY LH +E+ +R Q +
Sbjct: 73 INAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTR 114
>UNIPROTKB|Q5ZMV3 [details] [associations]
symbol:DR1 "Protein Dr1" species:9031 "Gallus gallus"
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 EMBL:AJ719281 IPI:IPI00571608
RefSeq:NP_001008478.1 UniGene:Gga.3162 ProteinModelPortal:Q5ZMV3
SMR:Q5ZMV3 STRING:Q5ZMV3 Ensembl:ENSGALT00000009417 GeneID:424496
KEGG:gga:424496 CTD:1810 GeneTree:ENSGT00550000075010
InParanoid:Q5ZMV3 OMA:NKKTINA OrthoDB:EOG4WM4W5 NextBio:20826822
Uniprot:Q5ZMV3
Length = 176
Score = 157 (60.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 29/95 (30%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI I+SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKR 101
Score = 39 (18.8 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 13/46 (28%), Positives = 17/46 (36%)
Query: 118 KYRELEGERANQQ----DKAXXXXXXXXXXEEREEPAGSSYGADDE 159
K R+ + E A Q+ +A AGSS DDE
Sbjct: 128 KARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEDDE 173
>RGD|1305201 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10116
"Rattus norvegicus" [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 RGD:1305201
GO:GO:0006355 GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BC083822 IPI:IPI00362084 RefSeq:NP_001011914.1
RefSeq:XP_003751365.1 UniGene:Rn.6666 ProteinModelPortal:Q5XI68
SMR:Q5XI68 STRING:Q5XI68 PhosphoSite:Q5XI68 PRIDE:Q5XI68
Ensembl:ENSRNOT00000000080 GeneID:100910207 GeneID:289881
KEGG:rno:100910207 KEGG:rno:289881 UCSC:RGD:1305201
InParanoid:Q5XI68 NextBio:630458 Genevestigator:Q5XI68
GermOnline:ENSRNOG00000000070 Uniprot:Q5XI68
Length = 176
Score = 157 (60.3 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 29/95 (30%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI I+SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKR 101
Score = 36 (17.7 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 118 KYRELEGERANQQ----DKAXXXXXXXXXXEEREEPAGSSYGADDE 159
K R+ + E A Q+ +A AGSS DD+
Sbjct: 128 KARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEDDD 173
>ZFIN|ZDB-GENE-061013-797 [details] [associations]
symbol:dr1 "down-regulator of transcription 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 ZFIN:ZDB-GENE-061013-797 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:BX511118 EMBL:CU929159 EMBL:BC124605 IPI:IPI00800622
RefSeq:NP_001070782.1 RefSeq:XP_003198826.1 UniGene:Dr.115546
SMR:Q08BR1 STRING:Q08BR1 Ensembl:ENSDART00000083401
Ensembl:ENSDART00000127108 Ensembl:ENSDART00000129855
Ensembl:ENSDART00000151060 GeneID:100536903 GeneID:768171
KEGG:dre:100536903 KEGG:dre:768171 InParanoid:Q08BR1
NextBio:20918487 Uniprot:Q08BR1
Length = 176
Score = 152 (58.6 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 28/95 (29%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI ++SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLVSSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVINALESLGFGSYIAEVKDVLQECKTVALKR 101
Score = 36 (17.7 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 118 KYRELEGERANQQ----DKAXXXXXXXXXXEEREEPAGSSYGADDE 159
K R+ + E A Q+ +A + AGSS D+E
Sbjct: 128 KARQQQAELAQQEWLQMQQAAQQAQLAAASASSTQQAGSSQDEDEE 173
>TAIR|locus:2181529 [details] [associations]
symbol:NF-YB12 ""nuclear factor Y, subunit B12""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
HOGENOM:HOG000178641 ProtClustDB:CLSN2719282 PANTHER:PTHR11064:SF8
HSSP:Q01658 EMBL:AF428400 EMBL:AY087017 EMBL:AY125544 EMBL:AK227164
IPI:IPI00535830 RefSeq:NP_568190.1 UniGene:At.23541
ProteinModelPortal:Q944I5 PRIDE:Q944I5 EnsemblPlants:AT5G08190.1
GeneID:830715 KEGG:ath:AT5G08190 TAIR:At5g08190 InParanoid:Q944I5
OMA:EVCNKED PhylomeDB:Q944I5 Genevestigator:Q944I5 Uniprot:Q944I5
Length = 163
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 34/118 (28%), Positives = 70/118 (59%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+++ LP A + +I+K++LPA+ +++++A++ + EC EFI+ I+SE++E C KE ++T+
Sbjct: 11 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTI 70
Query: 92 NGDDICWALGTLGFDDYAGPI-RRY-LHKYRELE-GERANQQDKAXXXXXXXXXXEER 146
+ + AL LGF +Y + Y HKY ++ +R+ + + E++
Sbjct: 71 APEHVLKALQVLGFGEYVEEVYAAYEQHKYETMQDSQRSVKMNSGAEMTEEEAAAEQQ 128
>DICTYBASE|DDB_G0269638 [details] [associations]
symbol:dr1 "putative histone-like transcription
factor" species:44689 "Dictyostelium discoideum" [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 dictyBase:DDB_G0269638 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
PANTHER:PTHR11064:SF8 OMA:NKKTINA RefSeq:XP_646136.1 HSSP:Q01658
ProteinModelPortal:Q55DJ5 STRING:Q55DJ5 EnsemblProtists:DDB0216393
GeneID:8617086 KEGG:ddi:DDB_G0269638 ProtClustDB:CLSZ2729292
Uniprot:Q55DJ5
Length = 178
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/102 (34%), Positives = 59/102 (57%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
KE LP A V +++K++LP + K S E ++ + EC EFI I+SEA++ C +E+++T
Sbjct: 7 KEDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRT 66
Query: 91 VNGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDK 132
+ + + AL LGF DY + K++ LE ++ K
Sbjct: 67 IAAEHVIKALTELGFSDYTQKVSDVYDKHK-LEVSTKSKSSK 107
>ZFIN|ZDB-GENE-040426-1773 [details] [associations]
symbol:pole3 "polymerase (DNA directed), epsilon 3
(p17 subunit)" species:7955 "Danio rerio" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
ZFIN:ZDB-GENE-040426-1773 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS OMA:TALAHKQ EMBL:CR925757
EMBL:CR855262 EMBL:BC059666 IPI:IPI00500787 RefSeq:NP_957095.1
UniGene:Dr.76881 STRING:Q6PBL4 Ensembl:ENSDART00000007512
GeneID:393774 KEGG:dre:393774 InParanoid:Q6PBL4 NextBio:20814771
Uniprot:Q6PBL4
Length = 148
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP +SKEA+ + + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPEGVNVSKEARRAISQAASVFVLYATSCANSFAMKAKRKTLNAGDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYRE-LEGER-ANQQDKAXXXXXXXXXXEEREEPAGSSY 154
A+ + F+ + P+R L Y++ +G++ A++Q + ++
Sbjct: 70 MSAMEEMEFERFLQPLREALEAYKKGQKGKKEASEQKRKDKEKKNGTDENDKSRDEEEDE 129
Query: 155 GADDEQITRNQA 166
DDEQ N+A
Sbjct: 130 HMDDEQDGENEA 141
>POMBASE|SPBC30D10.02 [details] [associations]
symbol:SPBC30D10.02 "transcription corepressor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0000785 "chromatin" evidence=NAS]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PomBase:SPBC30D10.02 GO:GO:0005829
GO:GO:0005634 GO:GO:0003714 EMBL:CU329671 GO:GO:0043565
GO:GO:0000785 GenomeReviews:CU329671_GR GO:GO:0000122
Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG5150
HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 OMA:NKKTINA HSSP:Q01658
PIR:T40194 RefSeq:NP_596283.1 ProteinModelPortal:O14348
STRING:O14348 EnsemblFungi:SPBC30D10.02.1 GeneID:2540406
KEGG:spo:SPBC30D10.02 OrthoDB:EOG41NXWS NextBio:20801533
Uniprot:O14348
Length = 161
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ E LP A V +++ ILP + +KEA++ + EC EFI ++SEA+E C KE +KT+
Sbjct: 7 DDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDK 132
+ I AL L F +Y +++E + R + K
Sbjct: 67 AAEHIIKALENLEFKEYIAEALEVAAEHKEQQKNREKKSSK 107
>UNIPROTKB|F1SN88 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0008622 "epsilon DNA polymerase complex" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 KO:K02326 GeneTree:ENSGT00550000074689 OMA:NDSGGHK
EMBL:FP102008 RefSeq:XP_003122132.1 UniGene:Ssc.2548
Ensembl:ENSSSCT00000006024 GeneID:100517450 KEGG:ssc:100517450
Uniprot:F1SN88
Length = 147
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPEGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYR-ELEGER-ANQQDKAXXXXXXXXXXEEREEPAGSSY 154
A+ + F + P++ L YR E +G++ A++Q K EE+++
Sbjct: 70 LSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDS--EEQDKSRDEDN 127
Query: 155 GADDEQITRNQ 165
D+E++ +
Sbjct: 128 DEDEERLEEEE 138
>UNIPROTKB|G5EHZ6 [details] [associations]
symbol:MGCH7_ch7g579 "Negative cofactor 2 complex subunit
beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0003714
GO:GO:0043565 GO:GO:0045944 GO:GO:0000122 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:CM000230 EMBL:CM001237
PANTHER:PTHR11064:SF8 GO:GO:0017054 RefSeq:XP_003720914.1
ProteinModelPortal:G5EHZ6 EnsemblFungi:MGG_02824T0 GeneID:2682377
KEGG:mgr:MGG_02824 Uniprot:G5EHZ6
Length = 138
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 37 LPIANVGRIMKQILPANAKI--SKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGD 94
LP A V +I+ +ILP + I SKEA++ + EC EFI+ I+SEA+E KE +KT+ D
Sbjct: 14 LPKATVQKIVSEILPQSDGITYSKEARDLLIECCVEFITLISSEANEISDKEAKKTIACD 73
Query: 95 DICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDK 132
I AL LGF +Y + +++E++ R + +K
Sbjct: 74 HITKALEVLGFSEYVPAVLEAAAEHKEVQKGREKKANK 111
>UNIPROTKB|F1P2L0 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
KO:K02326 CTD:54107 GeneTree:ENSGT00550000074689 OMA:TALAHKQ
EMBL:AADN02026940 IPI:IPI00819486 RefSeq:NP_001020525.2
UniGene:Gga.5487 Ensembl:ENSGALT00000040353 GeneID:417275
KEGG:gga:417275 NextBio:20820605 Uniprot:F1P2L0
Length = 143
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 39/130 (30%), Positives = 66/130 (50%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNAGDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYR-ELEGERANQQDKAXXXXXXXXXXEEREEPAGSSYG 155
A+ + F + P++ L YR E +G++ ++DK EE+++
Sbjct: 70 LSAMEEMEFQRFIAPLKESLEVYRREQKGKKEARKDK-----DKKADSEEQDKSREDDND 124
Query: 156 ADDEQITRNQ 165
DDE++ +
Sbjct: 125 DDDERMEEEE 134
>UNIPROTKB|Q3SZN5 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9913 "Bos taurus" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
EMBL:BT030577 EMBL:BC102772 IPI:IPI00716318 RefSeq:NP_001029562.1
UniGene:Bt.27905 HSSP:Q9V444 ProteinModelPortal:Q3SZN5 SMR:Q3SZN5
STRING:Q3SZN5 PRIDE:Q3SZN5 Ensembl:ENSBTAT00000000316 GeneID:510678
KEGG:bta:510678 CTD:54107 GeneTree:ENSGT00550000074689
HOGENOM:HOG000007701 HOVERGEN:HBG060262 InParanoid:Q3SZN5
OMA:NDSGGHK OrthoDB:EOG4TB4CS NextBio:20869563 Uniprot:Q3SZN5
Length = 147
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYR-ELEGER-ANQQDKAXXXXXXXXXXEEREEPAGSSY 154
A+ + F + P++ L YR E +G++ A++Q K EE+++
Sbjct: 70 LSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDS--EEQDKSRDEDN 127
Query: 155 GADDEQITRNQ 165
D+E++ +
Sbjct: 128 DEDEERLEEEE 138
>UNIPROTKB|Q9NRF9 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0008622 "epsilon DNA polymerase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IDA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0006260 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 EMBL:AL137066
eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
HOGENOM:HOG000007701 HOVERGEN:HBG060262 OMA:NDSGGHK
OrthoDB:EOG4TB4CS EMBL:AF226077 EMBL:AF261689 EMBL:AY720898
EMBL:AK074629 EMBL:AK074762 EMBL:AK074782 EMBL:DQ072116
EMBL:BC003166 EMBL:BC004170 IPI:IPI00010141 RefSeq:NP_059139.3
UniGene:Hs.108112 ProteinModelPortal:Q9NRF9 SMR:Q9NRF9
IntAct:Q9NRF9 MINT:MINT-1439872 STRING:Q9NRF9 PhosphoSite:Q9NRF9
DMDM:22653710 PaxDb:Q9NRF9 PeptideAtlas:Q9NRF9 PRIDE:Q9NRF9
Ensembl:ENST00000374169 Ensembl:ENST00000374171 GeneID:54107
KEGG:hsa:54107 UCSC:uc004bhn.2 GeneCards:GC09M116169
HGNC:HGNC:13546 HPA:HPA047945 MIM:607267 neXtProt:NX_Q9NRF9
PharmGKB:PA33499 InParanoid:Q9NRF9 PhylomeDB:Q9NRF9 ChiTaRS:POLE3
GenomeRNAi:54107 NextBio:56470 Bgee:Q9NRF9 CleanEx:HS_POLE3
Genevestigator:Q9NRF9 GermOnline:ENSG00000148229 Uniprot:Q9NRF9
Length = 147
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYR-ELEGER-ANQQDKAXXXXXXXXXXEEREEPAGSSY 154
A+ + F + P++ L YR E +G++ A++Q K EE+++
Sbjct: 70 LSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDS--EEQDKSRDEDN 127
Query: 155 GADDEQITRNQ 165
D+E++ +
Sbjct: 128 DEDEERLEEEE 138
>UNIPROTKB|Q5R4W3 [details] [associations]
symbol:POLE3 "DNA polymerase epsilon subunit 3"
species:9601 "Pongo abelii" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005671 GO:GO:0043966 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOVERGEN:HBG060262
OMA:NDSGGHK EMBL:CR861128 RefSeq:NP_001126884.1 UniGene:Pab.18535
ProteinModelPortal:Q5R4W3 SMR:Q5R4W3 PRIDE:Q5R4W3
Ensembl:ENSPPYT00000022775 GeneID:100173898 KEGG:pon:100173898
InParanoid:Q5R4W3 Uniprot:Q5R4W3
Length = 147
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYR-ELEGER-ANQQDKAXXXXXXXXXXEEREEPAGSSY 154
A+ + F + P++ L YR E +G++ A++Q K EE+++
Sbjct: 70 LSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDS--EEQDKSRDEDN 127
Query: 155 GADDEQITRNQ 165
D+E++ +
Sbjct: 128 DEDEERLEEEE 138
>TAIR|locus:2178307 [details] [associations]
symbol:NF-YB13 ""nuclear factor Y, subunit B13""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 EMBL:AB006708 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:D38110 EMBL:AY057709
EMBL:AY116960 IPI:IPI00529408 PIR:S53582 RefSeq:NP_851060.1
RefSeq:NP_851061.1 UniGene:At.270 ProteinModelPortal:P49592
SMR:P49592 STRING:P49592 PaxDb:P49592 PRIDE:P49592
EnsemblPlants:AT5G23090.1 EnsemblPlants:AT5G23090.2 GeneID:832373
KEGG:ath:AT5G23090 TAIR:At5g23090 eggNOG:COG5150
HOGENOM:HOG000178641 InParanoid:P49592 OMA:NDVCNKE PhylomeDB:P49592
ProtClustDB:CLSN2719282 Genevestigator:P49592 PANTHER:PTHR11064:SF8
Uniprot:P49592
Length = 159
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 29/94 (30%), Positives = 61/94 (64%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+++ LP A + +I+K++LP + +++++A++ + EC EFI+ ++SE+++ C KE ++T+
Sbjct: 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTI 70
Query: 92 NGDDICWALGTLGFDDYAGPI-RRY-LHKYRELE 123
+ + AL LGF +Y + Y HKY ++
Sbjct: 71 APEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQ 104
>UNIPROTKB|Q2KJ19 [details] [associations]
symbol:DR1 "Down-regulator of transcription 1, TBP-binding
(Negative cofactor 2)" species:9913 "Bos taurus" [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0017025 "TBP-class
protein binding" evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 GeneTree:ENSGT00550000075010
OMA:NKKTINA OrthoDB:EOG4WM4W5 HOVERGEN:HBG002051 EMBL:DAAA02007887
EMBL:BC105564 IPI:IPI00717517 RefSeq:NP_001039984.1
UniGene:Bt.42356 SMR:Q2KJ19 STRING:Q2KJ19
Ensembl:ENSBTAT00000011514 GeneID:613828 KEGG:bta:613828
InParanoid:Q2KJ19 NextBio:20898794 Uniprot:Q2KJ19
Length = 176
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/95 (30%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI I+SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKR 101
>UNIPROTKB|E2RR45 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0005671 "Ada2/Gcn5/Ada3 transcription activator complex"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003712 "transcription
cofactor activity" evidence=IEA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0043565 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 PANTHER:PTHR11064:SF8
CTD:1810 GeneTree:ENSGT00550000075010 OMA:NKKTINA EMBL:AAEX03004819
RefSeq:XP_537068.1 ProteinModelPortal:E2RR45
Ensembl:ENSCAFT00000032065 GeneID:479943 KEGG:cfa:479943
NextBio:20855049 Uniprot:E2RR45
Length = 176
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/95 (30%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI I+SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKR 101
>UNIPROTKB|J9P0Z6 [details] [associations]
symbol:POLE3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR003958
InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634 GO:GO:0043565
Gene3D:1.10.20.10 SUPFAM:SSF47113 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 OMA:TALAHKQ EMBL:AAEX03008085
RefSeq:XP_855374.2 Ensembl:ENSCAFT00000047307 GeneID:612550
KEGG:cfa:612550 Uniprot:J9P0Z6
Length = 147
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYR-ELEGER-ANQQDKAXXXXXXXXXXEEREEPAGSSY 154
A+ + F + P++ L YR E +G++ A++Q K EE+++
Sbjct: 70 LSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDA--EEQDKGRDEDN 127
Query: 155 GADDEQITRNQ 165
D+E++ +
Sbjct: 128 DEDEERLEEEE 138
>UNIPROTKB|Q01658 [details] [associations]
symbol:DR1 "Protein Dr1" species:9606 "Homo sapiens"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0017025 "TBP-class protein binding" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR003957
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 PRINTS:PR00615 GO:GO:0003714 GO:GO:0003677
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966 GO:GO:0017025 PDB:1JFI
PDBsum:1JFI eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 CTD:1810 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:M97388 EMBL:BT006972 EMBL:AL137159 EMBL:BC002809 EMBL:BC035507
EMBL:BC068553 IPI:IPI00008991 PIR:A43320 RefSeq:NP_001929.1
UniGene:Hs.348418 ProteinModelPortal:Q01658 SMR:Q01658
IntAct:Q01658 MINT:MINT-204839 STRING:Q01658 PhosphoSite:Q01658
DMDM:401162 PaxDb:Q01658 PeptideAtlas:Q01658 PRIDE:Q01658
DNASU:1810 Ensembl:ENST00000370267 Ensembl:ENST00000370272
GeneID:1810 KEGG:hsa:1810 UCSC:uc001dpu.3 GeneCards:GC01P093811
HGNC:HGNC:3017 MIM:601482 neXtProt:NX_Q01658 PharmGKB:PA27475
HOVERGEN:HBG002051 InParanoid:Q01658 PhylomeDB:Q01658
EvolutionaryTrace:Q01658 GenomeRNAi:1810 NextBio:7377
ArrayExpress:Q01658 Bgee:Q01658 CleanEx:HS_DR1
Genevestigator:Q01658 GermOnline:ENSG00000117505 Uniprot:Q01658
Length = 176
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/95 (30%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI I+SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKR 101
>MGI|MGI:1100515 [details] [associations]
symbol:Dr1 "down-regulator of transcription 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003957 InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615 MGI:MGI:1100515
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0043966
eggNOG:COG5150 HOGENOM:HOG000178641 PANTHER:PTHR11064:SF8 CTD:1810
GeneTree:ENSGT00550000075010 OMA:NKKTINA OrthoDB:EOG4WM4W5
EMBL:AK031057 EMBL:AK075713 EMBL:AK090113 EMBL:AK139866
EMBL:AK146573 EMBL:BC013461 IPI:IPI00128424 RefSeq:NP_080382.2
UniGene:Mm.303534 ProteinModelPortal:Q91WV0 SMR:Q91WV0
STRING:Q91WV0 PhosphoSite:Q91WV0 PaxDb:Q91WV0 PRIDE:Q91WV0
Ensembl:ENSMUST00000031190 GeneID:13486 KEGG:mmu:13486
UCSC:uc008ynt.1 InParanoid:Q91WV0 NextBio:283989 Bgee:Q91WV0
CleanEx:MM_DR1 Genevestigator:Q91WV0 GermOnline:ENSMUSG00000029265
Uniprot:Q91WV0
Length = 176
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/95 (30%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI I+SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKR 101
>UNIPROTKB|F1S534 [details] [associations]
symbol:DR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] InterPro:IPR003957 InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 PRINTS:PR00615
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 PANTHER:PTHR11064:SF8 GeneTree:ENSGT00550000075010
OMA:NKKTINA EMBL:CU469025 RefSeq:XP_001928514.1 UniGene:Ssc.5433
Ensembl:ENSSSCT00000025408 GeneID:100152776 KEGG:ssc:100152776
Uniprot:F1S534
Length = 176
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 28/95 (29%), Positives = 58/95 (61%)
Query: 32 EQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
+ + +P A + +++K+ LP N +++ +A+E + C +EFI ++SEA+E C K +KT+
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLVSSEANEICNKSEKKTI 66
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
+ + + AL +LGF Y ++ L + + + +R
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKR 101
>CGD|CAL0002303 [details] [associations]
symbol:NCB2 species:5476 "Candida albicans" [GO:0003713
"transcription coactivator activity" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0017054 "negative cofactor 2 complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 35/96 (36%), Positives = 59/96 (61%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A V +I+ +ILP + I+KEA+E + EC EFI +++++++ KE +KT+ D +
Sbjct: 14 LPKATVQKIINEILPKDIGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIASDHV 73
Query: 97 CWALGTLGFDDYAGPIRRYLHKYREL-EG-ERANQQ 130
AL L F Y I + L +++EL +G E+ N +
Sbjct: 74 VKALEELDFKIYLDIINKILDEHKELLKGKEKRNNK 109
>UNIPROTKB|Q5A0I6 [details] [associations]
symbol:NCB2 "Putative uncharacterized protein NCB2"
species:237561 "Candida albicans SC5314" [GO:0003713 "transcription
coactivator activity" evidence=IMP] [GO:0035690 "cellular response
to drug" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 CGD:CAL0002303 GO:GO:0005634
GO:GO:0043565 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG5150
PANTHER:PTHR11064:SF8 RefSeq:XP_715301.1 RefSeq:XP_715366.1
ProteinModelPortal:Q5A0I6 STRING:Q5A0I6 GeneID:3643028
GeneID:3643067 KEGG:cal:CaO19.13247 KEGG:cal:CaO19.5825
Uniprot:Q5A0I6
Length = 149
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 35/96 (36%), Positives = 59/96 (61%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A V +I+ +ILP + I+KEA+E + EC EFI +++++++ KE +KT+ D +
Sbjct: 14 LPKATVQKIINEILPKDIGIAKEAREAITECSIEFIMMLSTQSNDIAEKEAKKTIASDHV 73
Query: 97 CWALGTLGFDDYAGPIRRYLHKYREL-EG-ERANQQ 130
AL L F Y I + L +++EL +G E+ N +
Sbjct: 74 VKALEELDFKIYLDIINKILDEHKELLKGKEKRNNK 109
>RGD|1359475 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3, accessory
subunit" species:10116 "Rattus norvegicus" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=ISO]
[GO:0008622 "epsilon DNA polymerase complex" evidence=ISO;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 RGD:1359475
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 eggNOG:COG2036
GO:GO:0008622 GO:GO:0003887 KO:K02326 CTD:54107
GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OMA:NDSGGHK OrthoDB:EOG4TB4CS EMBL:BC081988
EMBL:BC083800 IPI:IPI00208715 RefSeq:NP_001007653.1
RefSeq:XP_002726991.1 RefSeq:XP_002729875.1 UniGene:Rn.3290
ProteinModelPortal:Q642A5 STRING:Q642A5 PRIDE:Q642A5
Ensembl:ENSRNOT00000006416 Ensembl:ENSRNOT00000020722
GeneID:100362333 GeneID:298098 KEGG:rno:100362333 KEGG:rno:298098
UCSC:RGD:1359475 InParanoid:Q642A5 NextBio:643156
Genevestigator:Q642A5 GermOnline:ENSRNOG00000004843
GermOnline:ENSRNOG00000015392 Uniprot:Q642A5
Length = 145
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 40/127 (31%), Positives = 65/127 (51%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYR-ELEGER-ANQQDKAXXXXXXXXXXEE-REEPAGSS 153
A+ + F + P++ L YR E +G++ A++Q K ++ REE
Sbjct: 70 LSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKDCEEQDKSREEEDEDE 129
Query: 154 YGADDEQ 160
D+E+
Sbjct: 130 ERLDEEE 136
>ASPGD|ASPL0000055867 [details] [associations]
symbol:AN9358 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR027113
Pfam:PF00808 GO:GO:0003714 EMBL:BN001308 GO:GO:0043565
GO:GO:0045944 GO:GO:0000122 GO:GO:0003713 Gene3D:1.10.20.10
SUPFAM:SSF47113 PANTHER:PTHR11064:SF8 OMA:NKKTINA GO:GO:0017054
ProteinModelPortal:C8VR63 EnsemblFungi:CADANIAT00001145
Uniprot:C8VR63
Length = 145
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 35/98 (35%), Positives = 57/98 (58%)
Query: 37 LPIANVGRIMKQILPANA--KISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGD 94
LP A V +I+ +ILP ++ SK+A++ + EC EFI+ I+SEA++ KE +KT+ +
Sbjct: 14 LPKATVQKIITEILPPSSGQSFSKDARDLLMECCVEFITLISSEANDISEKEAKKTIACE 73
Query: 95 DICWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDK 132
+ AL LGF DY + +++E R +Q K
Sbjct: 74 HVERALRDLGFGDYVPDVLAVAEEHKEQLKSREKKQSK 111
>UNIPROTKB|Q8W0W9 [details] [associations]
symbol:Dr1 "Repressor protein" species:4530 "Oryza sativa"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003958
InterPro:IPR009072 InterPro:IPR027113 Pfam:PF00808 GO:GO:0005634
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113
PANTHER:PTHR11064:SF8 HSSP:Q01658 EMBL:AF464902
ProteinModelPortal:Q8W0W9 IntAct:Q8W0W9 KEGG:dosa:Os08t0383700-02
Gramene:Q8W0W9 Genevestigator:Q8W0W9 Uniprot:Q8W0W9
Length = 296
Score = 156 (60.0 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 31/102 (30%), Positives = 66/102 (64%)
Query: 31 KEQERL-LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRK 89
K +E + LP + + +I+K++LP + +++++A++ + EC EFI+ ++SE++E C +E +K
Sbjct: 9 KSKEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKK 68
Query: 90 TVNGDDICWALGTLGFDDYAGPIRRYL--HKYRELEGERANQ 129
T+ + + AL LGF +Y ++ HK+ L+ +A++
Sbjct: 69 TIAPEHVLRALQDLGFREYIEEVQAAYEHHKHDTLDSPKASK 110
>MGI|MGI:1933378 [details] [associations]
symbol:Pole3 "polymerase (DNA directed), epsilon 3 (p17
subunit)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=ISO] [GO:0008622 "epsilon DNA polymerase complex"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 MGI:MGI:1933378
GO:GO:0043565 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671
GO:GO:0043966 eggNOG:COG2036 GO:GO:0008622 GO:GO:0003887 KO:K02326
CTD:54107 GeneTree:ENSGT00550000074689 HOGENOM:HOG000007701
HOVERGEN:HBG060262 OrthoDB:EOG4TB4CS EMBL:AF230806 EMBL:BC024996
IPI:IPI00123264 RefSeq:NP_067473.2 UniGene:Mm.27444
ProteinModelPortal:Q9JKP7 SMR:Q9JKP7 STRING:Q9JKP7
PhosphoSite:Q9JKP7 PaxDb:Q9JKP7 PRIDE:Q9JKP7
Ensembl:ENSMUST00000030091 GeneID:59001 KEGG:mmu:59001
UCSC:uc008tfb.1 InParanoid:Q9JKP7 NextBio:314514 Bgee:Q9JKP7
Genevestigator:Q9JKP7 GermOnline:ENSMUSG00000028394 Uniprot:Q9JKP7
Length = 145
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A + RI+K+ LP ISKEA+ + S F+ + TS A+ K +RKT+N D+
Sbjct: 10 LPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYRELE-GER-ANQQ---DKAXXXXXXXXXXEEREEPAG 151
A+ + F + P++ L YR E G++ A++Q DK E EE
Sbjct: 70 LSAMEEMEFQRFITPLKEALEAYRRDEKGKKEASEQKKKDKDKKDSEEQDKSREVEEEDE 129
Query: 152 SSYGADDE 159
DD+
Sbjct: 130 ERLDEDDQ 137
>FB|FBgn0043002 [details] [associations]
symbol:Chrac-14 "Chromatin accessibility complex 14kD
protein" species:7227 "Drosophila melanogaster" [GO:0008623 "CHRAC"
evidence=IDA;NAS] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 EMBL:AE014134 GO:GO:0043565 GO:GO:0006974
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0005671 GO:GO:0042766
GO:GO:0008623 eggNOG:NOG150487 KO:K02326
GeneTree:ENSGT00550000074689 OMA:TALAHKQ UniGene:Dm.3099
EMBL:AY070970 EMBL:AJ271141 RefSeq:NP_476646.2 RefSeq:NP_476647.2
PDB:2BYK PDB:2BYM PDBsum:2BYK PDBsum:2BYM SMR:Q9V444 IntAct:Q9V444
MINT:MINT-781706 STRING:Q9V444 EnsemblMetazoa:FBtr0100267
EnsemblMetazoa:FBtr0100268 GeneID:3772329 KEGG:dme:Dmel_CG13399
UCSC:CG13399-RA CTD:3772329 FlyBase:FBgn0043002 InParanoid:Q9V444
OrthoDB:EOG4RN8S4 EvolutionaryTrace:Q9V444 GenomeRNAi:3772329
NextBio:853337 Uniprot:Q9V444
Length = 128
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/97 (32%), Positives = 54/97 (55%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A +GR++K+ LP +A +SKEA+ + S F F+TS ++ K+ KT+ DI
Sbjct: 10 LPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDI 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDKA 133
L L F+ + + + L YR++ E+ ++ KA
Sbjct: 70 LQTLTELDFESFVPSLTQDLEVYRKVVKEK--KESKA 104
>ASPGD|ASPL0000061732 [details] [associations]
symbol:AN1225 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0005634 EMBL:BN001308 GO:GO:0043565
EMBL:AACD01000017 Gene3D:1.10.20.10 SUPFAM:SSF47113
eggNOG:NOG150487 OrthoDB:EOG4TQQKQ RefSeq:XP_658829.1
ProteinModelPortal:Q5BE05 EnsemblFungi:CADANIAT00001399
GeneID:2877002 KEGG:ani:AN1225.2 HOGENOM:HOG000207717 OMA:HANEATL
Uniprot:Q5BE05
Length = 280
Score = 120 (47.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 27/94 (28%), Positives = 53/94 (56%)
Query: 33 QERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVN 92
++ LLP + R+ K +LP N + K+A +Q+ + F+S+++S A+E K +TV+
Sbjct: 38 EDYLLPRSITLRLAKSVLPPNTSVQKDAVLAIQKAATVFVSYLSSHANEATLK---RTVS 94
Query: 93 GDDICWALGTLGFDDYAGPIRRYLHKYRELEGER 126
D+ AL L F+ + + + L K+ +L+ +
Sbjct: 95 PADVLNALSELEFEGFRPRLEKELDKFTDLKAAK 128
Score = 36 (17.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 10/45 (22%), Positives = 15/45 (33%)
Query: 123 EGERANQQDKAXXXXXXXXXXEEREEPAGSSYGADDEQITRNQAL 167
EGE D+ E E+ +DE + R + L
Sbjct: 200 EGEDGGDADEVEEEHEEDADATEEEDEEDEEERGEDEDLDRVEDL 244
>TAIR|locus:2038648 [details] [associations]
symbol:NF-YB11 ""nuclear factor Y, subunit B11""
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC006232 KO:K02326
OMA:HANEATL HSSP:Q13952 EMBL:BT004083 IPI:IPI00535292 PIR:C84673
RefSeq:NP_180316.1 UniGene:At.26474 UniGene:At.48523
ProteinModelPortal:Q9ZQH2 SMR:Q9ZQH2 PaxDb:Q9ZQH2 PRIDE:Q9ZQH2
EnsemblPlants:AT2G27470.1 GeneID:817292 KEGG:ath:AT2G27470
TAIR:At2g27470 eggNOG:NOG301039 HOGENOM:HOG000154037
InParanoid:Q9ZQH2 PhylomeDB:Q9ZQH2 ProtClustDB:CLSN2913083
ArrayExpress:Q9ZQH2 Genevestigator:Q9ZQH2 Uniprot:Q9ZQH2
Length = 275
Score = 114 (45.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/97 (28%), Positives = 53/97 (54%)
Query: 37 LPIANVGRIMKQILPA-----NAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTV 91
LP+A V R++K+ L + I KEA E FI ++++ A++ C+ RR+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 92 NGDDICWALGTLGFDDYAGPIRRYLHKYRELE-GERA 127
DD+ AL + F ++ P++ L +++ G++A
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDFKKKNAGKKA 107
Score = 36 (17.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 123 EGERANQQDKAXXXXXXXXXXEEREEPAGSSYGADDEQITRN 164
E E N ++ +E E G+ DDE N
Sbjct: 170 EEENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTEEN 211
>POMBASE|SPBC3D6.09 [details] [associations]
symbol:dpb4 "DNA polymerase epsilon subunit Dpb4"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IC] [GO:0006270 "DNA replication initiation"
evidence=IGI] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043596 "nuclear replication fork" evidence=IC]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
PomBase:SPBC3D6.09 GO:GO:0005829 EMBL:CU329671 GO:GO:0043565
GenomeReviews:CU329671_GR GO:GO:0000790 GO:GO:0006270
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008622 GO:GO:0003887
PIR:T40369 RefSeq:NP_595521.1 ProteinModelPortal:P87174
IntAct:P87174 STRING:P87174 EnsemblFungi:SPBC3D6.09.1
GeneID:2540966 KEGG:spo:SPBC3D6.09 eggNOG:NOG150487 KO:K02326
OMA:AMINSAT OrthoDB:EOG4TQQKQ NextBio:20802081 Uniprot:P87174
Length = 210
Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP + + R++K +LP + + KEA + M + F+SF+TS + E RK + D+
Sbjct: 17 LPRSIIMRLVKGVLPEKSLVQKEALKAMINSATLFVSFLTSASGEIATNNNRKILMPQDV 76
Query: 97 CWALGTLGFDDYAGPIRRYLHKY 119
AL + + +++ ++++L Y
Sbjct: 77 LNALDEIEYPEFSKTLKKHLEAY 99
>DICTYBASE|DDB_G0272222 [details] [associations]
symbol:ybl1 "YB-like 1" species:44689 "Dictyostelium
discoideum" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003958 InterPro:IPR009072 Pfam:PF00808
dictyBase:DDB_G0272222 GO:GO:0005634 GO:GO:0043565
GenomeReviews:CM000151_GR Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AAFI02000008 GO:GO:0003887 eggNOG:NOG150487 KO:K02326
HSSP:Q9V444 RefSeq:XP_645298.1 ProteinModelPortal:Q75JQ9
STRING:Q75JQ9 EnsemblProtists:DDB0216318 GeneID:8618464
KEGG:ddi:DDB_G0272222 OMA:TALAHKQ Uniprot:Q75JQ9
Length = 138
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/132 (22%), Positives = 61/132 (46%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A V RI+K LP +KE++ + + +I ++T+ + + R T++ D+
Sbjct: 7 LPGAIVNRIIKASLPEGVLCAKESRLAIAKAAKVWIHYLTAASIDFSSHSGRSTISPKDV 66
Query: 97 CWALGTLGFDDYAGPIRRYL-----HKYRELEGERANQQDKAXXXXXXXXXXEEREEPAG 151
A+ + F+++ + YL K +E E E+ +++K + ++E
Sbjct: 67 FQAIEEIDFENFKPQLEEYLAALKSEKEKEKEKEKEKEKEKEKEKDSNKDDTKSKDENKS 126
Query: 152 S---SYGADDEQ 160
S S + DE+
Sbjct: 127 SKKSSSSSKDEK 138
>WB|WBGene00001092 [details] [associations]
symbol:dro-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0043565 GO:GO:0005622 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:Z81546 eggNOG:COG5150 HOGENOM:HOG000178641
GeneTree:ENSGT00550000075010 OMA:NKKTINA HSSP:Q01658 PIR:T22529
RefSeq:NP_499750.1 UniGene:Cel.10656 ProteinModelPortal:O45550
SMR:O45550 STRING:O45550 PaxDb:O45550 EnsemblMetazoa:F53A2.5
GeneID:191629 KEGG:cel:CELE_F53A2.5 UCSC:F53A2.5 CTD:191629
WormBase:F53A2.5 InParanoid:O45550 NextBio:949738 Uniprot:O45550
Length = 184
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 31 KEQERLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKT 90
++ E LP + +I+K+++P +I+ E+++ + C EF+ I EA +++RKT
Sbjct: 16 EDNEIGLPQKGINQIIKEVVP-EMRIANESRDMINACCVEFVKHIAREAQRIASQDQRKT 74
Query: 91 VNGDDICWALGTLGFD-DY 108
+ + + AL LGF DY
Sbjct: 75 IYHEHVQKALQNLGFTPDY 93
>GENEDB_PFALCIPARUM|PF13_0043 [details] [associations]
symbol:PF13_0043 "CCAAT-binding transcription
factor, putative" species:5833 "Plasmodium falciparum" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AL844509 HSSP:P25208
RefSeq:XP_001349808.1 ProteinModelPortal:Q8IEN4
EnsemblProtists:PF13_0043:mRNA GeneID:814022 KEGG:pfa:PF13_0043
EuPathDB:PlasmoDB:PF3D7_1308100 HOGENOM:HOG000280793
ProtClustDB:CLSZ2433133 Uniprot:Q8IEN4
Length = 152
Score = 103 (41.3 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 53 NAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDICWALGTLGFDDYAGPI 112
N ++ KEA ET+ +C+S FI +IT A E C E+R T+ DI +L F D +
Sbjct: 37 NYRMRKEALETLGKCLSMFILYITDGAMEYCENEKRSTILVRDILNSLDDSLFLDIHDEL 96
Query: 113 RRYL 116
+R L
Sbjct: 97 KRQL 100
>UNIPROTKB|Q8IEN4 [details] [associations]
symbol:PF13_0043 "CCAAT-binding transcription factor,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR003958 InterPro:IPR009072
Pfam:PF00808 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AL844509 HSSP:P25208
RefSeq:XP_001349808.1 ProteinModelPortal:Q8IEN4
EnsemblProtists:PF13_0043:mRNA GeneID:814022 KEGG:pfa:PF13_0043
EuPathDB:PlasmoDB:PF3D7_1308100 HOGENOM:HOG000280793
ProtClustDB:CLSZ2433133 Uniprot:Q8IEN4
Length = 152
Score = 103 (41.3 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 53 NAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDICWALGTLGFDDYAGPI 112
N ++ KEA ET+ +C+S FI +IT A E C E+R T+ DI +L F D +
Sbjct: 37 NYRMRKEALETLGKCLSMFILYITDGAMEYCENEKRSTILVRDILNSLDDSLFLDIHDEL 96
Query: 113 RRYL 116
+R L
Sbjct: 97 KRQL 100
>SGD|S000002805 [details] [associations]
symbol:NCB2 "Subunit of a heterodimeric NC2 transcription
regulator complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0017054 "negative cofactor 2 complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IGI;IMP] InterPro:IPR003958 InterPro:IPR009072
InterPro:IPR027113 Pfam:PF00808 SGD:S000002805 GO:GO:0003714
GO:GO:0043565 GO:GO:0045944 EMBL:BK006938 GO:GO:0006351
GO:GO:0000122 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:U32274 eggNOG:COG5150 HOGENOM:HOG000178641
PANTHER:PTHR11064:SF8 GeneTree:ENSGT00550000075010 HSSP:Q01658
OrthoDB:EOG41NXWS GO:GO:0017054 EMBL:U91948 EMBL:Y09266 PIR:S69694
RefSeq:NP_010685.1 ProteinModelPortal:Q92317 SMR:Q92317
DIP:DIP-2067N IntAct:Q92317 MINT:MINT-528090 STRING:Q92317
PaxDb:Q92317 EnsemblFungi:YDR397C GeneID:852006 KEGG:sce:YDR397C
CYGD:YDR397c NextBio:970198 Genevestigator:Q92317
GermOnline:YDR397C Uniprot:Q92317
Length = 146
Score = 96 (38.9 bits), Expect = 0.00076, P = 0.00076
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 37 LPIANVGRIMKQILPANAKISKEAKETMQECVSEFISFITSEASEKCRKERRKTVNGDDI 96
LP A V +++ +IL + +K+A+E + EFI ++S ASE E +KT+ + +
Sbjct: 10 LPKATVQKMISEILDQDLMFTKDAREIIINSGIEFIMILSSMASEMADNEAKKTIAPEHV 69
Query: 97 CWALGTLGFDDYAGPIRRYLHKYRELEGERANQQDK 132
AL L ++++ + L ++ + + + K
Sbjct: 70 IKALEELEYNEFIPFLEEILLNFKGSQKVKETRDSK 105
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 188 165 0.00093 107 3 11 23 0.43 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 586 (62 KB)
Total size of DFA: 136 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.48u 0.07s 15.55t Elapsed: 00:00:01
Total cpu time: 15.48u 0.07s 15.55t Elapsed: 00:00:01
Start: Tue May 21 03:06:52 2013 End: Tue May 21 03:06:53 2013