BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044290
MAAGLSMLKLSVLSLLSNLNSGLWPESSKGLKMFPPTCNRIECPSFETVHVGNGFEIRRY
DSSMWMSTSPIQDISLVEAF

High Scoring Gene Products

Symbol, full name Information P value
HBP1
AT1G17100
protein from Arabidopsis thaliana 4.7e-16
AT1G78450 protein from Arabidopsis thaliana 1.8e-14
AT1G78460 protein from Arabidopsis thaliana 3.2e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044290
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2020307 - symbol:HBP1 "AT1G17100" species:3702...   200  4.7e-16   1
TAIR|locus:2032065 - symbol:AT1G78450 "AT1G78450" species...   185  1.8e-14   1
TAIR|locus:2032055 - symbol:AT1G78460 species:3702 "Arabi...   145  3.2e-10   1


>TAIR|locus:2020307 [details] [associations]
            symbol:HBP1 "AT1G17100" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0019761
            "glucosinolate biosynthetic process" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005774 EMBL:AC007651
            eggNOG:NOG86107 InterPro:IPR011256 InterPro:IPR006917
            PANTHER:PTHR11220 Pfam:PF04832 SUPFAM:SSF55136 HOGENOM:HOG000237638
            OMA:TVAQYNS EMBL:AY086962 EMBL:BT024615 IPI:IPI00517681 PIR:G86306
            RefSeq:NP_173153.1 UniGene:At.21016 UniGene:At.48199
            ProteinModelPortal:Q9SHG8 SMR:Q9SHG8 IntAct:Q9SHG8 STRING:Q9SHG8
            PaxDb:Q9SHG8 PRIDE:Q9SHG8 DNASU:838280 EnsemblPlants:AT1G17100.1
            GeneID:838280 KEGG:ath:AT1G17100 TAIR:At1g17100 InParanoid:Q9SHG8
            PhylomeDB:Q9SHG8 ProtClustDB:CLSN2681876 Genevestigator:Q9SHG8
            Uniprot:Q9SHG8
        Length = 232

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 35/58 (60%), Positives = 47/58 (81%)

Query:    25 PESSKGLKM---FPPTCNRIECPSFETVHVGNGFEIRRYDSSMWMSTSPIQDISLVEA 79
             P++  G+     FPP+CNRIECPS+E VH GNG+EIRRY++++W+ST PI DISLV+A
Sbjct:    26 PDAESGVAQIGKFPPSCNRIECPSYELVHSGNGYEIRRYNNTVWVSTEPIPDISLVDA 83


>TAIR|locus:2032065 [details] [associations]
            symbol:AT1G78450 "AT1G78450" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] EMBL:CP002684 EMBL:AC013430
            EMBL:AC007260 InterPro:IPR011256 InterPro:IPR006917
            PANTHER:PTHR11220 Pfam:PF04832 SUPFAM:SSF55136 IPI:IPI00524993
            PIR:H96812 RefSeq:NP_565181.1 UniGene:At.34296
            ProteinModelPortal:Q9SYN6 SMR:Q9SYN6 EnsemblPlants:AT1G78450.1
            GeneID:844181 KEGG:ath:AT1G78450 TAIR:At1g78450 InParanoid:Q9SYN6
            PhylomeDB:Q9SYN6 Genevestigator:Q9SYN6 Uniprot:Q9SYN6
        Length = 225

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 31/45 (68%), Positives = 38/45 (84%)

Query:    35 PPTCNRIECPSFETVHVGNGFEIRRYDSSMWMSTSPIQDISLVEA 79
             PP CNR ECPS+E VH GNG+EI RY++++W+ST PIQDISL EA
Sbjct:    28 PPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEA 72


>TAIR|locus:2032055 [details] [associations]
            symbol:AT1G78460 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC013430
            EMBL:AC007260 InterPro:IPR011256 InterPro:IPR006917
            PANTHER:PTHR11220 Pfam:PF04832 SUPFAM:SSF55136 HOGENOM:HOG000237638
            EMBL:AK317161 IPI:IPI00530601 PIR:A96813 RefSeq:NP_177967.1
            UniGene:At.14786 ProteinModelPortal:Q9SYN5 SMR:Q9SYN5 PRIDE:Q9SYN5
            EnsemblPlants:AT1G78460.1 GeneID:844182 KEGG:ath:AT1G78460
            TAIR:At1g78460 InParanoid:Q9SYN5 OMA:WISTSPI PhylomeDB:Q9SYN5
            ProtClustDB:CLSN2912693 Genevestigator:Q9SYN5 Uniprot:Q9SYN5
        Length = 219

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 26/56 (46%), Positives = 38/56 (67%)

Query:    24 WPESSKGLKMFPPTCNRIECPSFETVHVGNGFEIRRYDSSMWMSTSPIQDISLVEA 79
             W   S G +  P TC+  ECP+++ V  G GFEIR YD+++W+STSPI  +S+ +A
Sbjct:    29 W-NPSNGFR--PGTCDHYECPTYKLVEAGYGFEIRMYDAALWISTSPIPSLSMTQA 81


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        61   0.00091  102 3  11 22  0.39    28
                                                     29  0.39    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  102 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.72u 0.16s 6.88t   Elapsed:  00:00:01
  Total cpu time:  6.72u 0.16s 6.88t   Elapsed:  00:00:01
  Start:  Tue May 21 03:09:04 2013   End:  Tue May 21 03:09:05 2013

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