BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044292
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/161 (66%), Positives = 132/161 (81%), Gaps = 10/161 (6%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
+KKMIILKSSDGE+FE+EE VA++SQTI+HM+EDDCAD+ IPLPNVTG IL+ V+EYCKK
Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63
Query: 69 HVEAAAAAAGGDND---------VKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQ 119
HVE AAA AGGD D +KNWD +FVKVDQ TL DL+LAANYLNI LL+LTC+
Sbjct: 64 HVE-AAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCK 122
Query: 120 ATADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A AD ++ K+PE++R F+I ND+TP+EE E+R EN+WAFE
Sbjct: 123 AVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/161 (65%), Positives = 127/161 (78%), Gaps = 10/161 (6%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
+KKMIILKSSDGE+FEVEE VA++SQTI+HM+EDDC D+ IPLPNVTG IL+ V+EYCKK
Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63
Query: 69 HVEAAAAAAGGDND---------VKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQ 119
HVE AAA AGGD D +K WD DFVKVD TL DLL AANYLNI LL+LTC+
Sbjct: 64 HVE-AAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCK 122
Query: 120 ATADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A AD ++ K+P ++R F+I ND+TP+EE E+R EN+WAFE
Sbjct: 123 AVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 131/159 (82%), Gaps = 7/159 (4%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S K I+LKSSDGE+FEVEE VAL+SQTI HMVEDDC D+ +PLPNVT IL+ V+EYCK+
Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61
Query: 69 HVEAAAA-------AAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
HVEAAA+ AA D+D+K WD DF+K+DQ TL +L+LAANYLNIK+LL+LTCQ
Sbjct: 62 HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
AD+IK K+PEE+R F+I NDFTP+EE+E+RRENQWAFE
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 126/167 (75%), Gaps = 17/167 (10%)
Query: 11 KMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKKHV 70
+ I LKSSDGE FE++E VAL+SQTI+HM+EDDC D+ IPLPNVT ILS V+EYCK+HV
Sbjct: 5 RKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHV 64
Query: 71 EAA-----------------AAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDL 113
EAA A+ D D+K WD +F+KVDQ TL DL+LAANYLNIK L
Sbjct: 65 EAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGL 124
Query: 114 LELTCQATADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
L+LTCQ AD+IK K+PEE+R+ F+I NDFTP+EE+E+RRENQWAFE
Sbjct: 125 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S KMI+L SSDG++FEVEE VA+QSQTI HMVEDDC IPL NV IL V+EYCKK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61
Query: 69 HVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVIKDK 128
H A + D+ NWD F+ ++Q T+ +L+LAANYLNIK LL+LTCQ AD+IK K
Sbjct: 62 H-HVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGK 120
Query: 129 SPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
+PEE+R F+I NDFTP+EE+ +R+ENQWAFE
Sbjct: 121 TPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S KMI+L SSDG++FEVEE VA+QSQTI HMVEDDC IPL NV IL V+EYCKK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61
Query: 69 -HVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVIKD 127
HV+ A + + D+ WD F+ ++Q T+ +L+LAANYLNIK L +LTCQ AD+IK
Sbjct: 62 YHVDEANPIS--EEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKG 119
Query: 128 KSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K+PEE+R F+I NDFTP+EE+ +R+ENQWAFE
Sbjct: 120 KTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S K IILKSSDG +FEVEE A Q QTI HM EDDC D+ IPLP VTG IL MV+EYC K
Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNK 61
Query: 69 HVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVIKDK 128
H AA D D+K WD++F++ Q T+ DL++AANYLNIK LL+L CQ AD+IKD
Sbjct: 62 H-HVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDN 120
Query: 129 SPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
+ E R+ F+I ND+T +EE+ +RRENQW FE
Sbjct: 121 TVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 118/152 (77%), Gaps = 2/152 (1%)
Query: 11 KMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKKHV 70
KM++L SSDGE+F+VEE VA+QSQTI HM+EDDC + +P+ NVTG ILS V+EYCKKHV
Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHV 62
Query: 71 EAAAAAAGGDNDVKNWDRDFVKVDQE--TLLDLLLAANYLNIKDLLELTCQATADVIKDK 128
+ + +++K WD +F+K ++ TL D++LAANYLNIKDLL+L CQ AD+I K
Sbjct: 63 VSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGK 122
Query: 129 SPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
P+E+R + I NDFTP+EE+EIR+ENQWAFE
Sbjct: 123 KPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 111/153 (72%), Gaps = 2/153 (1%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTI-RHMVEDDCADSVIPLPNVTGTILSMVVEYCK 67
S K IILKSSDG +FEVEE A Q Q I HM E+DC D+ IPLPNVTG IL+MV+EYC
Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCN 61
Query: 68 KHVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVIKD 127
KH AA D+D+K WD++F++ D T+ DL+ AANYLNIK L +L CQ A++IK
Sbjct: 62 KH-HVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKG 120
Query: 128 KSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
+PE++R F+I ND TP+EE IRREN+WAFE
Sbjct: 121 NTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 111/153 (72%), Gaps = 6/153 (3%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S I+L SSDGE+FEVEE VA + + + HM+EDDC + +PL NVTG ILS+VVEYCKK
Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKK 61
Query: 69 HVEAAAAAAGGDNDVKNWDRDFVK-VDQETLLDLLLAANYLNIKDLLELTCQATADVIKD 127
HV ++ K WD +F+K DQ T+ LLLAANYLNIK LL+L+ Q AD IKD
Sbjct: 62 HV-----VDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKD 116
Query: 128 KSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K+PEE+R IF+I NDFTP+EE +R+EN WAFE
Sbjct: 117 KTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 115/166 (69%), Gaps = 14/166 (8%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S I+L SSD E+FEVEE VA + + I HM++DDCAD IPL NVTG IL++V+EYCKK
Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKK 61
Query: 69 HV-----------EAAAAAAG--GDNDVKNWDRDFVK-VDQETLLDLLLAANYLNIKDLL 114
HV EA + N+++ WD +F+K D ET++ L+LA NYLN++DLL
Sbjct: 62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLL 121
Query: 115 ELTCQATADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
LTCQ AD +KD SPEEVR +F+I ND+TP+EE IR+EN WAFE
Sbjct: 122 GLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 114/166 (68%), Gaps = 14/166 (8%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S I+L SSDGE+F+VEE VA + Q ++H++EDDC + IPL NVTG ILS+V+EYCKK
Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKK 61
Query: 69 HVEAAAAAAGGDNDVKN------------WDRDFVK-VDQETLLDLLLAANYLNIKDLLE 115
HV+ + K WD +F+K +D ET+ L+LAANYLN++ LL
Sbjct: 62 HVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLG 121
Query: 116 LTCQATADVIKDKSPEEVRRIFHINNDFTPQEEQE-IRRENQWAFE 160
LTCQ AD IKDK+PEEVR +F+I NDFT +EE+E IR+EN WAFE
Sbjct: 122 LTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 115/189 (60%), Gaps = 37/189 (19%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S K I+L SSDGE+F+VEE VA + Q + H++EDDCA + IP+PNVTG IL+ V+EYCKK
Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKK 61
Query: 69 HVE-----------------------------AAAAAAGGDNDVKN-------WDRDFVK 92
HVE A + GD++ ++ WD F+K
Sbjct: 62 HVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMK 121
Query: 93 -VDQETLLDLLLAANYLNIKDLLELTCQATADVIKDKSPEEVRRIFHINNDFTPQEEQEI 151
D +T+ D++LAANYLN++ L +L + AD IKD +PEEVR +F+I NDFTP+EE+ I
Sbjct: 122 DFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAI 181
Query: 152 RRENQWAFE 160
R EN W FE
Sbjct: 182 RNENAWTFE 190
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 114/155 (73%), Gaps = 9/155 (5%)
Query: 12 MIILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHV 70
++ L+SSD + FE+E+ +A S TI++M+ED +DS IPLPNVT TIL V++YC+ H
Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHH- 61
Query: 71 EAAAAAAGGD-------NDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATAD 123
+ G D +D+ +DRDF KVDQ TL +L+LAANYL+IK LL++TC+ A+
Sbjct: 62 HQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVAN 121
Query: 124 VIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
+I+ K+PEE+R+IF+I NDFTP+EE++IR+EN+W
Sbjct: 122 MIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S K I+LKSS+G+TFE+EE A Q QTI HM+E +C D+VI + +T IL MV+EYC K
Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNK 61
Query: 69 HVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVIKDK 128
H AA D+D++ WD++F++ D+ T+ L AAN+LN K LL L Q AD+IK
Sbjct: 62 H-HVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGN 120
Query: 129 SPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
+P+++R F+I ND TP+EE IRREN+WAFE
Sbjct: 121 TPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 114/155 (73%), Gaps = 9/155 (5%)
Query: 12 MIILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHV 70
++ L+SSD + FE+E+ +A S TI++M+ED +D+ IPLPNVT TIL V++YC+ H
Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHH- 61
Query: 71 EAAAAAAGGD-------NDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATAD 123
+ G D +D+ +DRDF KVDQ TL +L+LAANYL+IK LL++TC+ A+
Sbjct: 62 HQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVAN 121
Query: 124 VIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
+I+ K+PEE+R+IF+I NDFTP+EE++IR+EN+W
Sbjct: 122 MIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 110/154 (71%), Gaps = 11/154 (7%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKKHVEA 72
I+LKSSDG++FE++E VA +S I HMVED CA VIPL NVT IL +V++YC+KHV++
Sbjct: 5 IMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKS 64
Query: 73 AAAAAGGDNDVKNWDRDFVKVDQETLL-DLLLAANYLNIKDLLELTCQAT-----ADVIK 126
+ D+K WD DF+K + T+L D+++AANYLNI+ LL+LTC+ AD++
Sbjct: 65 KE-----EEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLS 119
Query: 127 DKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K+P+E+R F+I ND T +E +IR ENQWAF+
Sbjct: 120 GKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 104/155 (67%), Gaps = 4/155 (2%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S I+L SSDGE+FE++E VA + I HM+ED+CA IPL NVTG ILS ++EY K
Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKM 61
Query: 69 HVEAAAAAAGGDNDVKN---WDRDFV-KVDQETLLDLLLAANYLNIKDLLELTCQATADV 124
HV + + KN WD F+ K+D ET+ ++LAANYLN + LL Q AD
Sbjct: 62 HVNEPSEEDEDEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADY 121
Query: 125 IKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAF 159
IKDK+PEEVR IF+I NDFTP+EE+EIR+EN W F
Sbjct: 122 IKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 105/152 (69%), Gaps = 5/152 (3%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S K I+L SSD E FE++E VA + Q + HM++DDCAD I L NVTG IL++++EYCKK
Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKK 61
Query: 69 HVEAAAAAAGGDNDVKNWDRDFVK-VDQETLLDLLLAANYLNIKDLLELTCQATADVIKD 127
HV+ A N+ WD +FVK +D +TL LL AA+YL + L L QA AD D
Sbjct: 62 HVDDVEAK----NEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTAD 117
Query: 128 KSPEEVRRIFHINNDFTPQEEQEIRRENQWAF 159
K+ E+R +F+I ND+TP+EE+E+R++N+WAF
Sbjct: 118 KTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 107/159 (67%), Gaps = 11/159 (6%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-----DCADSVIPLPNVTGTILSMVVEYCK 67
I L+SSDGE FEV+ +A QS TI+ M+ED + D +PLPNV IL V+++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 68 KHVEAAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQAT 121
H + +N D+ WD++F+KVDQ TL +L+LAANYL+IK LL++TC+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 122 ADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
A++IK K+PEE+R+ F+I NDFT +EE ++R+ENQW E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 106/156 (67%), Gaps = 12/156 (7%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVEDDCADS--VIPLPNVTGTILSMVVEYCKKHV 70
I L SSDG +E VA +S I++M+ED DS IP+PNV ++L V+E+CK H
Sbjct: 9 ITLTSSDGVEITIERQVAERSILIKNMLED-LGDSGEAIPIPNVNESVLKKVIEWCKHH- 66
Query: 71 EAAAAAAGGDN--------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATA 122
+ + G D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A
Sbjct: 67 KGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVA 126
Query: 123 DVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
++IK KSPEE+R+ F+I NDFTP+EE +IRREN+WA
Sbjct: 127 NMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSV--IPLPNVTGTILSMVVEYC 66
++KM+++ S+DG+ EV VA +S I++M+ED D IP+PNV+ +LS V+E+C
Sbjct: 2 AEKMLVMTSNDGKNIEVPRDVAERSLLIKNMLED-LGDPTEPIPIPNVSENVLSKVLEWC 60
Query: 67 KKH------VEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQA 120
H + D++ WD+ F++VDQE L +++LAANYL+IK LL++ C+
Sbjct: 61 AHHRNDPPSSADDDDSRRKTTDIEEWDQKFMQVDQEMLFEIILAANYLDIKPLLDIGCKT 120
Query: 121 TADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
A++IK KSPEE+R+ F+I NDFTP+EE +IRREN+WA
Sbjct: 121 VANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 113/170 (66%), Gaps = 16/170 (9%)
Query: 1 MSSSSENNSKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADS--VIPLPNVTGTI 58
M+S++ N I L SSDG +E VA +S I++M+ED DS IP+PNV ++
Sbjct: 1 MASTATNK----ITLTSSDGVEVTIERQVAERSILIKNMLED-LGDSGEPIPIPNVNESV 55
Query: 59 LSMVVEYCKKHVEAAAAAAGGDN--------DVKNWDRDFVKVDQETLLDLLLAANYLNI 110
L V+E+C+ H + + G D+ D+ WD+ F++VDQE L +++LAANYL+I
Sbjct: 56 LKKVIEWCEHH-KGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDI 114
Query: 111 KDLLELTCQATADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K LL++ C+ A++IK KSPEE+R+ F+I NDFTP+EE +IRREN+WA E
Sbjct: 115 KALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 164
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 7/155 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ L SSDG V+ VA +S I++M+ED +D IP+PNV +L V+E+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
+ D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 7/155 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ L SSDG V+ VA +S I++M+ED +D IP+PNV +L V+E+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
+ D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 7/155 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ L SSDG V+ VA +S I++M+ED +D IP+PNV +L V+E+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
+ D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
Query: 5 SENNSKKM--IILKSSDGETFEVEETVALQSQTIRHMVEDDCADSV----IPLPNVTGTI 58
+EN+ + + + L+S+DG+ V+ VA +S I++++ED ++V IPLPNV +
Sbjct: 2 AENDERALQKVSLQSNDGQIITVDRVVAERSLLIKNLIEDLGDEAVMNEAIPLPNVNEPV 61
Query: 59 LSMVVEYCKKHVEAAAAAAGGDND-------VKNWDRDFVKVDQETLLDLLLAANYLNIK 111
L VVE+C+ H + +ND + WD+ F++VDQE L +++LAANY++IK
Sbjct: 62 LRKVVEWCEHHRKDPPQTTEDENDSRKKSTEIDEWDQKFMQVDQEMLFEIILAANYMDIK 121
Query: 112 DLLELTCQATADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
LL++ C+ A++IK KSPEE+R+ F+I NDFTP+EE++IRREN+WA
Sbjct: 122 PLLDVGCKTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWA 168
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 100/153 (65%), Gaps = 7/153 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ SSDG VE VA +SQ I++M+ED IP+PNV +L V+E+C H
Sbjct: 6 LTFTSSDGVDIPVERDVAERSQLIKNMLEDLGETGEPIPIPNVNEAVLKKVIEWCTHHKN 65
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
+ D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 66 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKGLLDVGCKTVANMI 125
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA
Sbjct: 126 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 100/153 (65%), Gaps = 7/153 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ SSDG VE VA +SQ I++M+ED IP+PNV +L V+E+C H
Sbjct: 6 LTFTSSDGVDIPVERDVAERSQLIKNMLEDLGETGEPIPIPNVNEAVLKKVIEWCTHHKN 65
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
+ D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 66 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKGLLDVGCKTVANMI 125
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA
Sbjct: 126 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 106/156 (67%), Gaps = 12/156 (7%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVEDDCADS--VIPLPNVTGTILSMVVEYCKKHV 70
I L SSDG ++ VA +S I++M++D DS IP+PNV ++L V+E+CK H
Sbjct: 9 ITLTSSDGVDITIDRQVAERSILIKNMLKD-LGDSGEAIPIPNVNESVLKKVIEWCKHH- 66
Query: 71 EAAAAAAGGDN--------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATA 122
+ + G D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A
Sbjct: 67 KGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVA 126
Query: 123 DVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
++IK KSPEE+R+ F+I NDFTP+EE +IRREN+WA
Sbjct: 127 NMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 102/155 (65%), Gaps = 7/155 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ L SSDG V+ VA +S I++M+ED + IP+PNV +L V+E+C H
Sbjct: 5 VTLTSSDGVDLTVDRDVAERSVLIKNMLEDLGESGEAIPIPNVNEVVLKKVIEWCTHHKN 64
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
+ D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 65 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 124
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA E
Sbjct: 125 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 159
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 101/155 (65%), Gaps = 7/155 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
++ SSDG V+ VA +S I++M+ED IP+PNV +L V+E+C H
Sbjct: 7 LVFTSSDGVDITVDRDVAERSLLIKNMLEDLGETGEAIPIPNVNEAVLKKVIEWCTHHKN 66
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
+ D+ D+ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 67 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKGLLDVGCKTVANMI 126
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWAFE 160
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA E
Sbjct: 127 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 161
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 106/155 (68%), Gaps = 9/155 (5%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVEDDCADSV-IPLPNVTGTILSMVVEYCKKHVE 71
I L SSD E F V++ +A +S I++M+ED +V IPLPNV+ +L V+E+C+ H
Sbjct: 4 IKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKN 63
Query: 72 AAAAAAGGDNDVK--------NWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATAD 123
+ ++D++ WDR F+ VDQE L +++LA+NYL+IK LL+ C+ A+
Sbjct: 64 DLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVAN 123
Query: 124 VIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
+I+ KSPE++R+ F+I NDFTP+EE++IR+EN+WA
Sbjct: 124 MIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 105/154 (68%), Gaps = 9/154 (5%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ L+SSD VE VA +S I++++ED ++ +P+PNV ++L V+E+C H +
Sbjct: 5 VTLQSSDSVDITVERAVAERSMLIKNLLEDLGESEEPVPIPNVNESVLKKVIEWCTHH-K 63
Query: 72 AAAAAAGGDND-------VKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADV 124
+ G D+D + WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++
Sbjct: 64 NDPQSTGEDDDNRRRTTEIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANM 123
Query: 125 IKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
IK KSPEE+R+ F+I NDFTP+EE +IRREN+WA
Sbjct: 124 IKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 102/153 (66%), Gaps = 7/153 (4%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVED-DCADSVIPLPNVTGTILSMVVEYCKKHVE 71
+ L+SSD VE VA +S I++++ED ++ +P+PNV ++L V+E+C H
Sbjct: 5 VTLQSSDQVNITVERAVAERSMLIKNLLEDLGESEEPVPIPNVNESVLKKVIEWCTHHKN 64
Query: 72 AAAAAAGGDN------DVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVI 125
D+ ++ WD+ F++VDQE L +++LAANYL+IK LL++ C+ A++I
Sbjct: 65 DPQTTGEEDDNRRRTTEIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 124
Query: 126 KDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
K KSPEE+R+ F+I NDFTP+EE +IRREN+WA
Sbjct: 125 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 83/116 (71%), Gaps = 5/116 (4%)
Query: 48 VIPLPNVTGTILSMVVEYCKKHVEAAAAAAGGDND-----VKNWDRDFVKVDQETLLDLL 102
V+P+PNV ++L V+E+ + H ++ D+ V +WDR+F+KVDQE L +++
Sbjct: 76 VMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEII 135
Query: 103 LAANYLNIKDLLELTCQATADVIKDKSPEEVRRIFHINNDFTPQEEQEIRRENQWA 158
LAANYLNIK LL+ C+ A++I+ +SPEE+RR F+I NDFTP+EE IRREN+WA
Sbjct: 136 LAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
>sp|Q9LSY0|ASK7_ARATH SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1
Length = 125
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSVIPLPNVTGTILSMVVEYCKK 68
S K I+LKSSDG+ FE+EE A Q QTI HM+E +C D+VIP+ NVT IL MV+EYC K
Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNK 61
Query: 69 HVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADVIKD 127
H AA D D+K WD++F++ DQ T+ L+ AA L+IK LL L Q AD++ D
Sbjct: 62 H-HVDAANPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMVND 119
>sp|Q1PEF6|ASK6_ARATH SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1
Length = 85
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 36 IRHMVEDDCADSVIPLPNVTGTILSMVVEYCKKHVEAAAAAAGGDNDVKNWDRDFV-KVD 94
I+ M EDDCAD+ IPLPNVT IL +V+EYCKKHV + D+K WD +F+ K++
Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHV-----VESKEEDLKKWDAEFMKKME 57
Query: 95 QETLLDLLLAANYLNIKDLLELT 117
Q L D+++AANYLNI+ LL+LT
Sbjct: 58 QSILFDVMMAANYLNIQSLLDLT 80
>sp|A8MQG7|ASK20_ARATH SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1
Length = 352
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 10 KKMIILKSSDGETFEVEETVALQSQTI-RHMVEDDCADS---VIPLP-NVTGTILSMVVE 64
K I L+++DG +VE+ VA+ I + +++ S I LP V + S++++
Sbjct: 15 KSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILD 74
Query: 65 YCKKHVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADV 124
YC+ H + + K +D F+++D + L +L AA+ L +K L++LT +A A +
Sbjct: 75 YCRFH----QLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130
Query: 125 IKDKSPEEVRRIFHINNDFTPQEEQE 150
I+ K+PEE+R IFH+ +D T +E+ E
Sbjct: 131 IEGKNPEEIREIFHLPDDLTEEEKLE 156
>sp|Q8LF97|ASK21_ARATH SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1
Length = 351
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 10 KKMIILKSSDGETFEVEETVALQSQTI-RHMVEDDCADS---VIPLP-NVTGTILSMVVE 64
K I L+++DG +VE+ VA+ I + +++ S I LP V +LS++ +
Sbjct: 15 KSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFD 74
Query: 65 YCKKHVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNIKDLLELTCQATADV 124
YC+ H + + K +D F+++D + L +L AA+ L +K L++LT +A A +
Sbjct: 75 YCRFH----QVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130
Query: 125 IKDKSPEEVRRIFHINNDFTPQEEQE 150
I+ K+PEE+R IFH+ +D T +E+ E
Sbjct: 131 IEGKTPEEIREIFHLPDDLTEEEKLE 156
>sp|Q751F9|ELOC_ASHGO Elongin-C OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) GN=ELC1 PE=3 SV=1
Length = 100
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Query: 13 IILKSSDGETFEVEETVALQSQTIRHMVEDDCA---DSVIPLPNVTGTILSMVVEYCKKH 69
+ L SSDG++FEV A+ S T+ M++ A ++ + LP + ++L+ VVEY ++
Sbjct: 7 VTLVSSDGKSFEVPRERAMLSPTLAKMLDSSFAEAKEAKVTLPTIESSMLAKVVEYL-EY 65
Query: 70 VEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNI 110
+E G+ D+ ++ V E L+LLLAA+YL I
Sbjct: 66 LEEYKHKDDGE-DIPQFE-----VPPEISLELLLAADYLQI 100
>sp|Q03071|ELOC_YEAST Elongin-C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ELC1 PE=1 SV=1
Length = 99
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 9 SKKMIILKSSDGETFEVEETVALQSQTIRHMVEDDCADSV--IPLPNVTGTILSMVVEYC 66
S+ + L S D + +E+ + A+ S T++ M+E +S I L IL VEY
Sbjct: 2 SQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYL 61
Query: 67 KKHVEAAAAAAGGDNDVKNWDRDFVKVDQETLLDLLLAANYLNI 110
+++ + + D+++ ++ + E L+LLLAA+YL+I
Sbjct: 62 NYNLKYSGVSE-DDDEIPEFE-----IPTEMSLELLLAADYLSI 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,503,738
Number of Sequences: 539616
Number of extensions: 2203500
Number of successful extensions: 5856
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 5721
Number of HSP's gapped (non-prelim): 69
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)