Your job contains 1 sequence.
>044293
MSAPRVRETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLS
KSSSPIIRTLSLSILLNLSLNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSL
AMLDKNKARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSEL
IHLIGSTEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044293
(236 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 179 5.5e-13 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 168 1.3e-11 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 163 4.8e-11 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 162 5.9e-11 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 154 3.8e-09 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 151 1.3e-08 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 148 3.2e-08 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 148 3.7e-08 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 145 1.2e-07 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 134 8.6e-07 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 137 9.9e-07 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 128 4.7e-06 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 128 9.9e-06 1
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 179 (68.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 59/236 (25%), Positives = 106/236 (44%)
Query: 1 MSAPRVRETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLS 60
+S ++ T+ C+ +S S ++ A L + + R L+ ++ GAI L+ L
Sbjct: 176 ISPEDLQPTVKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGES-GAIQALIPLL 234
Query: 61 KXXXXXXXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSL 120
+ + K +A+ I L W++++ + A +L+ SL
Sbjct: 235 RCNDPWTQEHAVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALL-SL 293
Query: 121 AMLDKNKARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSEL 180
A+L++NK G G + LV + S L++L +L N AV AGAV L
Sbjct: 294 ALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPL 353
Query: 181 IHLIGSTEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
+ L+ E +A ++ VL+ LA D+G A+ + I +L V+ ++ S+ KE
Sbjct: 354 VDLVAE-EGTGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAAL-VEAIEDGSVKGKE 407
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 168 (64.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 51/215 (23%), Positives = 99/215 (46%)
Query: 10 INNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXXXXX 69
I V R S S ED++ A+ + S+++ S R L+A+ GAI L+ L
Sbjct: 333 IRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEA-GAIPVLVNLLTSEDVATQE 391
Query: 70 XXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKNKAR 129
+ K+ + + + ++++ + + A++L SL++ D+NK
Sbjct: 392 NAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLF-SLSLADENKII 450
Query: 130 FGVAGTVQVLVKAVSAPSNPAGHH-LLSSLAELVQFHGNSTLAVRAGAVSELIHLIGSTE 188
G +G + LV + P G ++L L +HGN AVRAG V+ L+ ++ +
Sbjct: 451 IGGSGAIPALVDLLEN-GTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDST 509
Query: 189 AEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLM 223
+ +L +L++LA + A+ K + + +L+
Sbjct: 510 RHRMVDEALTILSVLANNQDAKSAIVKANTLPALI 544
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 163 (62.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 53/219 (24%), Positives = 98/219 (44%)
Query: 10 INNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXXXXX 69
I V + S S ED++ A+ + S+++ S R L+A+ GAI L+ L
Sbjct: 343 IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLTSDGDTETQ 401
Query: 70 XXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKNKAR 129
+ + L + ++ + S E + A++ + SL++ D+NK
Sbjct: 402 ENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKII 461
Query: 130 FGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELIHLIGSTEA 189
G +G + LV + S ++L L + GN AVRAG V L+ ++ + +
Sbjct: 462 IGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSS 521
Query: 190 EDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLK 228
E +A +L +L++LA A+ + + I L +D L+
Sbjct: 522 ERMADEALTILSVLASNQVAKTAILRANAIPPL-IDCLQ 559
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 162 (62.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 54/225 (24%), Positives = 111/225 (49%)
Query: 14 VSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXXXXXXXXX 73
++R +S + ++Q+ A + + + + R +A+ GAI L+ L
Sbjct: 329 MNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEA-GAIPLLVNLLSSSDPRTQEHAVT 387
Query: 74 XXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKNKARFGVA 133
+ + K S+ I ++ ++++ S ET + A++ + SL+++D+NK G A
Sbjct: 388 ALLNLSIHENNKASIVDSHAIPKIVEVLKTGS-METRENAAATLFSLSVVDENKVTIGAA 446
Query: 134 GTVQVLVKAVSAPSNPAGHH-LLSSLAELVQFHGNSTLAVRAGAVSELIH-LIGSTEAED 191
G + L+ + +P G +++ L + GN AV+AG V L++ L+ T
Sbjct: 447 GAIPPLINLL-CDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGG-- 503
Query: 192 LAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
+ +L++L++LA EG I + +++ I L V+V+K S ++E
Sbjct: 504 MIDEALSLLSILAGNPEGKIVIARSEPIPPL-VEVIKTGSPRNRE 547
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 154 (59.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 53/235 (22%), Positives = 103/235 (43%)
Query: 2 SAPRVRETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSK 61
S+P I + + R + EDQ+ A + + + + R +A+ GAI L+GL
Sbjct: 346 SSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEA-GAIPLLVGLLS 404
Query: 62 XXXXXXXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLA 121
+ K ++ S I + +++ S + A++L SL+
Sbjct: 405 TPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLF-SLS 463
Query: 122 MLDKNKARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELI 181
++D+NK G G + LV ++ + ++L L + GN A+RAG + L
Sbjct: 464 VIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLT 523
Query: 182 HLIGSTEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
L+ + + +LA+L +L+ EG + +D + SL V+ ++ S ++E
Sbjct: 524 RLL-TEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSL-VEFIRTGSPRNRE 576
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 151 (58.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/221 (23%), Positives = 99/221 (44%)
Query: 7 RETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXX 66
R I+ +S+ S E+Q+ A L + + + R +A+ GAI LL L
Sbjct: 366 RANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEA-GAIPLLLSLLSSSDLR 424
Query: 67 XXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKN 126
+ D K S+ S + + ++++ S + A++L SL+++D+
Sbjct: 425 TQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLF-SLSVIDEY 483
Query: 127 KARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELIHLIGS 186
K G G + LV + S ++L L + GN A+RAG V ++ L+ +
Sbjct: 484 KVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN 543
Query: 187 TEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVL 227
L ++A+L++L+ EG A+ + V ++V+++
Sbjct: 544 PTGA-LMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMI 582
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 148 (57.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 48/230 (20%), Positives = 102/230 (44%)
Query: 7 RETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXX 66
R + + + + + + E Q+ A L + + + R +A+ GAI L+ L
Sbjct: 344 RTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEA-GAIPLLVELLSSPDPR 402
Query: 67 XXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKN 126
N K ++ I + ++++ S + A++L SL+++D+N
Sbjct: 403 TQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLF-SLSVIDEN 461
Query: 127 KARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELIHLIGS 186
K G AG +Q L+ + + +++ L + GN + AV+ G V L L+
Sbjct: 462 KVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKD 521
Query: 187 TEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
+ +LA+L +L+ EG A+ + + I ++V++++ S ++E
Sbjct: 522 AGG-GMVDEALAILAILSTNQEGKTAIAEAESI-PVLVEIIRTGSPRNRE 569
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 148 (57.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 54/235 (22%), Positives = 105/235 (44%)
Query: 2 SAPRVRETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSK 61
S+ + + + +S S + Q++A + + R S R ++A+ + AI +L+ L
Sbjct: 415 SSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE-AIPSLVSLLY 473
Query: 62 XXXXXXXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLA 121
N + K +A I L ++++ +E +++ + SL+
Sbjct: 474 STDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLS 533
Query: 122 MLDKNKARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELI 181
++++ K G AG ++ LV + + S ++L L H N T + AGAV L+
Sbjct: 534 VIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLV 593
Query: 182 HLIGSTEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
L+ A + ++ VL LA EG IA+ + I ++V+V++ S KE
Sbjct: 594 ELMDP--AFGMVEKAVVVLANLATVREGKIAIGEEGGI-PVLVEVVELGSARGKE 645
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 145 (56.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/232 (25%), Positives = 105/232 (45%)
Query: 6 VRETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXX 65
V + V +S S + Q++A L + + + R ++ + GAI L+ L
Sbjct: 542 VETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GAIVLLVELLYSTDS 600
Query: 66 XXXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDK 125
N + K+++A I L ++++ SS+ A++L SL+++++
Sbjct: 601 ATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLF-SLSVIEE 659
Query: 126 NKARFGVAGTVQVLVKAVSAPSNPAGHH-LLSSLAELVQFHGNSTLAVRAGAVSELIHLI 184
NK + G +G + LV + P G ++L L N + V++GAV LI L+
Sbjct: 660 NKIKIGQSGAIGPLVDLLGN-GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM 718
Query: 185 GSTEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
A + ++AVL LA EG A+ + I L+V+V++ S KE
Sbjct: 719 DP--AAGMVDKAVAVLANLATIPEGRNAIGQEGGI-PLLVEVVELGSARGKE 767
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 134 (52.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 51/230 (22%), Positives = 101/230 (43%)
Query: 8 ETINNCVSRSQSDS-YEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXX 66
+ I N ++ +S S E+Q++A + +++ P+ R LA+ GAI L+ L
Sbjct: 60 DVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKA-GAIKPLVSLISSSDLQ 118
Query: 67 XXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKN 126
+ K+ + S + L ++ + A +L+ L+ +++N
Sbjct: 119 LQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALL-RLSQVEEN 177
Query: 127 KARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELIHLIGS 186
K G +G + +LV + A ++L L + N T AV +G + L+ L+
Sbjct: 178 KITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMID 237
Query: 187 TEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
E+ D+ S V+NLL E A+ + V ++V++++ + KE
Sbjct: 238 FES-DMVDKSAFVMNLLMSAPESKPAVVEEGG-VPVLVEIVEAGTQRQKE 285
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 137 (53.3 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 50/223 (22%), Positives = 102/223 (45%)
Query: 7 RETINNCVSRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXX 66
++ ++ V S E+Q+++++ + + R +P+ R L+A GAI L+ L
Sbjct: 378 KDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANA-GAIPLLVQLLSYPDSG 436
Query: 67 XXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKN 126
+ K+ +++ I + I+++ + + A++L SL+MLD+N
Sbjct: 437 IQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALF-SLSMLDEN 495
Query: 127 KARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELIHLIGS 186
K G++ + LV + + L++L L N A+ AG V L++L+
Sbjct: 496 KVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKD 555
Query: 187 TEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKG 229
+ +L++L LLA EG A+ + I +L+ + +G
Sbjct: 556 KNL-GMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQG 597
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 128 (50.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 50/230 (21%), Positives = 100/230 (43%)
Query: 8 ETINNCVSRSQSD-SYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXX 66
+ IN+ VS S S ++Q++A + +++ P+ R +A+ GAI L+ L
Sbjct: 62 DLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKA-GAIKPLISLISSSDLQ 120
Query: 67 XXXXXXXXXXXXXXNPDLKQSLASMETIYRLNWIIQSSSSQETVKLASSLICSLAMLDKN 126
+ K+S+AS I L ++ + A +L+ L+ +++N
Sbjct: 121 LQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALL-RLSQIEEN 179
Query: 127 KARFGVAGTVQVLVKAVSAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELIHLIGS 186
K G +G + +LV + A ++L L N AV++G + L+ L+
Sbjct: 180 KVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMAD 239
Query: 187 TEAEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLKGRSMFSKE 236
++ S V++LL E A+ + V ++V++++ + KE
Sbjct: 240 F-GSNMVDKSAFVMSLLMSVPESKPAIVEEGG-VPVLVEIVEVGTQRQKE 287
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 128 (50.1 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 15 SRSQSDSYEDQQKALQTLASITRVSPQYRSLLAQTDGAISTLLGLSKXXXXXXXXXXXXX 74
++ +S DQ++ L + +TR + + R L +L L K
Sbjct: 231 NKLKSSEIFDQEQGLIMMRKMTRTNDEARVSLCSP-----RILSLLKNMIVSRYSLVQTN 285
Query: 75 XXXXXXNPDLKQSLASMETIYRLNWI-----IQSSSSQETVKLASSLICSLAMLDKNKAR 129
N L + + TI RL ++ + S S+E + A+ I SL++ D NK
Sbjct: 286 ALASLVNLSLDKK--NKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMP 343
Query: 130 FGVAGTVQVLVKAV-SAPSNPAGHHLLSSLAELVQFHGNSTLAVRAGAVSELIHLIGSTE 188
GV G +Q L+ A+ +A S+ H +L L N + VR GAV L ++ S E
Sbjct: 344 IGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGE 403
Query: 189 AEDLAGTSLAVLNLLARFDEGMIALTKTDQIVSLMVDVLK 228
+ A +L V+ LA EG A+ + V+++V L+
Sbjct: 404 S---ASRALLVICNLACCSEGRSAMLDANA-VAILVGKLR 439
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.126 0.333 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 236 217 0.00090 112 3 10 23 0.40 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 611 (65 KB)
Total size of DFA: 194 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.23u 0.09s 23.32t Elapsed: 00:00:01
Total cpu time: 23.23u 0.09s 23.32t Elapsed: 00:00:01
Start: Tue May 21 03:13:26 2013 End: Tue May 21 03:13:27 2013