BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044294
(431 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147801313|emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera]
Length = 433
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/426 (78%), Positives = 382/426 (89%), Gaps = 1/426 (0%)
Query: 3 SRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
++ SDYGAFME+F+LQPSSS+H+LPL+GLTFA+KDIFDVDG+VTGFGNPDWARTH AA
Sbjct: 2 AKASDYGAFMERFILQPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAML 61
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
TAP+VLAVL GGAT +GKT+MDEMAYSINGENKHYGTPTNP APDRVPGGSSSGSAVAVG
Sbjct: 62 TAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAVG 121
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A LVDFSLGTDTGGSVRVPASYCGIFG RPSH VST GVIPMAQSFDTVGWFA DP+IL
Sbjct: 122 AMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEIL 181
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
NRVG VLL D VN V+PSQ+I EDC +L SIP DRVTQ L+KSVEKLFG I+++V
Sbjct: 182 NRVGHVLLPFPD-VNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKHVS 240
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
LGDYV+DKV SL+ F+S+ N+ QEY+IPSLAALS+AMRLLQRYEFKNNHG+WV V+PDL
Sbjct: 241 LGDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVRAVQPDL 300
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
GPGI ERVWEA+ T+ +KIDVCQS+KTE R+AL+ LLGD G+LV+PTVPGPPPKLQ DP+
Sbjct: 301 GPGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTDPT 360
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
LE FRARAFSLLSIAGVSGFCQVSIPLGL+DNLPVA+SLLAKHGSDGFLLNLV+TL+ +
Sbjct: 361 TLESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLYGS 420
Query: 423 LKEELQ 428
+KE+++
Sbjct: 421 IKEQVE 426
>gi|359487733|ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera]
gi|296088312|emb|CBI36757.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/426 (78%), Positives = 382/426 (89%), Gaps = 1/426 (0%)
Query: 3 SRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
++ S+YGAFME+F+LQPSSS+H+LPL+GLTFA+KDIFDVDG+VTGFGNPDWARTH AA
Sbjct: 2 AKASNYGAFMERFILQPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAML 61
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
TAP+VLAVL GGAT +GKT+MDEMAYSINGENKHYGTPTNP APDRVPGGSSSGSAVAVG
Sbjct: 62 TAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAVG 121
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A LVDFSLGTDTGGSVRVPASYCGIFG RPSH VST GVIPMAQSFDTVGWFA DP+IL
Sbjct: 122 AMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEIL 181
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
NRVG VLL D VN V+PSQ+I EDC +L SIP DRVTQ L+KSVEKLFG I+++V
Sbjct: 182 NRVGHVLLPFPD-VNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKHVS 240
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
LGDYV+DKV SL+ F+S+ N+ QEY+IPSLAALS+AMRLLQRYEFKNNHG+WV V+PDL
Sbjct: 241 LGDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVREVQPDL 300
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
GPGI ERVWEA+ T+ +KIDVCQS+KTE R+AL+ LLGD G+LV+PTVPGPPPKLQ DP+
Sbjct: 301 GPGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTDPT 360
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
LE FRARAFSLLSIAGVSGFCQVSIPLGL+DNLPVA+SLLAKHGSDGFLLNLV+TL+ +
Sbjct: 361 TLESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLYGS 420
Query: 423 LKEELQ 428
+KE+++
Sbjct: 421 IKEQVE 426
>gi|255542602|ref|XP_002512364.1| amidase, putative [Ricinus communis]
gi|223548325|gb|EEF49816.1| amidase, putative [Ricinus communis]
Length = 500
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/421 (77%), Positives = 371/421 (88%), Gaps = 1/421 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAFMEKFVL+PSSS+ QLPL LTFA+KDIFDVDG+VTGFGNPDWARTHSAAT+TAPA
Sbjct: 78 DYGAFMEKFVLKPSSSSDQLPLHSLTFAVKDIFDVDGYVTGFGNPDWARTHSAATATAPA 137
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VLAVL GGAT +GK IMDEMAYSINGEN HYGTPTNP APDRVPGGSSSGSAVAVGAKLV
Sbjct: 138 VLAVLRGGATCVGKVIMDEMAYSINGENAHYGTPTNPSAPDRVPGGSSSGSAVAVGAKLV 197
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLG+DTGGSVRVPASYCGI GFRPSH VS +GVIPMAQSFDTVGWF+ +P IL VG
Sbjct: 198 DFSLGSDTGGSVRVPASYCGILGFRPSHGVVSVSGVIPMAQSFDTVGWFSRNPVILKHVG 257
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
R+LLQL D V+ +P+Q+ AEDC QLSSIP RV+Q LVKSVEKLFGG I+++V LGDY
Sbjct: 258 RLLLQLPD-VDRTKPNQIFIAEDCFQLSSIPKKRVSQVLVKSVEKLFGGDIVKHVNLGDY 316
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
V+DKVPSL+HF+S+ KEQEY+I LAALSSAMR+LQRYEFK NHG+WVTTVKPD GPG+
Sbjct: 317 VEDKVPSLRHFMSKEIKEQEYNIAPLAALSSAMRMLQRYEFKTNHGEWVTTVKPDFGPGL 376
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
ER+WEAVR++ + ID QSV+TELRAAL+ LL + GI+ IPTVPG PPKL DP+ LE+
Sbjct: 377 KERIWEAVRSTEENIDAFQSVRTELRAALTNLLEEFGIIAIPTVPGVPPKLNTDPTTLEI 436
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
FRA+AFSLLSI GVSGFCQVSIPLG+HD LPV+ISLLAKHGSD FLLN+VETL++TL+EE
Sbjct: 437 FRAKAFSLLSITGVSGFCQVSIPLGMHDGLPVSISLLAKHGSDVFLLNVVETLYDTLQEE 496
Query: 427 L 427
+
Sbjct: 497 V 497
>gi|224125294|ref|XP_002319550.1| amidase family protein [Populus trichocarpa]
gi|222857926|gb|EEE95473.1| amidase family protein [Populus trichocarpa]
Length = 427
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/425 (75%), Positives = 375/425 (88%), Gaps = 4/425 (0%)
Query: 4 RDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
RD DYGAFM+KFVL+P+SSAH PL GLTFA+KD+ +G+VTGFG+PDWARTHSAATST
Sbjct: 3 RDPDYGAFMDKFVLEPTSSAHDQPLHGLTFAVKDM---EGYVTGFGHPDWARTHSAATST 59
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
APAVLAVL GGAT +GKTIMDEMAYSINGEN HYGTP NPCAPDRVPGGSSSGSAVAVGA
Sbjct: 60 APAVLAVLRGGATCVGKTIMDEMAYSINGENIHYGTPINPCAPDRVPGGSSSGSAVAVGA 119
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
K+VDFSLGTDTGGSVRVPASYCGI GFRPSH AV +AGVIPMAQSFDTVGWFA DP IL+
Sbjct: 120 KIVDFSLGTDTGGSVRVPASYCGILGFRPSHDAVPSAGVIPMAQSFDTVGWFARDPVILS 179
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
RVG +LLQ + ++ ++PSQVI AEDC QLS+IP+DR+ Q LVKSVEK++GGHI+++ +L
Sbjct: 180 RVGHILLQ-SPVMDPIKPSQVIIAEDCFQLSNIPNDRLGQVLVKSVEKIYGGHILKHTVL 238
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
GDYVK+KVPSL+HF+S KE E++IPSLAALS+AMR L+RYEFK+NHG+W+T VKP+LG
Sbjct: 239 GDYVKEKVPSLKHFMSNEIKELEHNIPSLAALSNAMRSLERYEFKDNHGEWITAVKPELG 298
Query: 304 PGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
P ISERVWEAVRT+ + +D C SVKTEL AAL+ LL D GIL IPTV G PPKLQ DP+
Sbjct: 299 PAISERVWEAVRTTGENVDACHSVKTELHAALATLLQDFGILAIPTVSGLPPKLQADPTT 358
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
L++FRA+AF LLSIAGVSGFCQVSIPLG++DNLPV++SLLAK GSD FLLN+VE+L+ TL
Sbjct: 359 LKIFRAKAFGLLSIAGVSGFCQVSIPLGMYDNLPVSVSLLAKQGSDAFLLNVVESLYGTL 418
Query: 424 KEELQ 428
KE+++
Sbjct: 419 KEQVE 423
>gi|356576771|ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 433
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/426 (72%), Positives = 371/426 (87%), Gaps = 1/426 (0%)
Query: 6 SDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
SDYGAFMEKF L P+S A LPL+ LTFA+K+IFDV+G+VTGFGNPDWARTH+ ATSTAP
Sbjct: 5 SDYGAFMEKFTLPPNS-APSLPLNSLTFAVKEIFDVEGYVTGFGNPDWARTHTVATSTAP 63
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
VLA+L GAT +GKT+MDEMAYSINGEN HYGTP NPCAPDRVPGGSSSGSAVAVGA+L
Sbjct: 64 TVLALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAVAVGAEL 123
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
VDFSLGTDTGGSVRVPASYCGIFGFRPSH A+S +GVIPM+QSFDTVGWFA DP IL+RV
Sbjct: 124 VDFSLGTDTGGSVRVPASYCGIFGFRPSHGAISESGVIPMSQSFDTVGWFARDPMILSRV 183
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
G V+LQL D +RP+ +I AEDC QLSS P D VT ++++VEKL+GG ++++ ILGD
Sbjct: 184 GGVILQLPDVAPPIRPTCIIIAEDCFQLSSTPFDVVTGTVIQAVEKLYGGDVLKHEILGD 243
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
YVK VPSL+HF+S+ N +Q YSIPSLAALSSAMRLLQRYEFKNNHG+W++ VKPDLGPG
Sbjct: 244 YVKTNVPSLKHFMSKENTDQIYSIPSLAALSSAMRLLQRYEFKNNHGEWISAVKPDLGPG 303
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
ISERV +A+RT+ + ID+C S+K EL AL+ALLGD G L+IPTVPGPPPKLQ + S LE
Sbjct: 304 ISERVSDALRTTGENIDICYSIKKELHDALAALLGDFGALMIPTVPGPPPKLQTNTSDLE 363
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+FRARAFSLLSIAGVSGFCQVSIPLG+++NLP++ISL+A+HG+D FLL+LVE+L++++K+
Sbjct: 364 IFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADRFLLHLVESLYDSIKD 423
Query: 426 ELQRMS 431
Q ++
Sbjct: 424 RKQHIT 429
>gi|356535097|ref|XP_003536085.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 433
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/425 (72%), Positives = 365/425 (85%), Gaps = 1/425 (0%)
Query: 6 SDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
SDYGAF EKF L P+S A LPL LTFA+K+IFD +G+VTGFGNPDWARTH ATSTAP
Sbjct: 5 SDYGAFTEKFTLPPNS-APALPLKSLTFAVKEIFDTEGYVTGFGNPDWARTHPVATSTAP 63
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
LA+L GAT +GKT+MDEMAYSINGEN HYGTP NPCAPDRVPGGSSSGSAVAVGAKL
Sbjct: 64 TALALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAVAVGAKL 123
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
VDFSLGTDTGGSVRVPASYCGIFGFRPSH AVS +GVIPM+QSFDTVGWFA DP IL+RV
Sbjct: 124 VDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSESGVIPMSQSFDTVGWFARDPMILSRV 183
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
G V+LQL D +RP+ +I AEDC QLSS P D VT ++K+VEKL+GG +++ ILGD
Sbjct: 184 GGVILQLPDVAPPIRPTSIIIAEDCFQLSSTPFDVVTGTVIKAVEKLYGGDVLKPEILGD 243
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
YVK VPSL+HF+S+ N +Q Y+IPSLAALSSAMRLLQR+EFKNNHG+W++ VKPDLGPG
Sbjct: 244 YVKTNVPSLKHFMSKDNTDQIYNIPSLAALSSAMRLLQRFEFKNNHGEWISAVKPDLGPG 303
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
ISERV +A+RT+ + ID+C S+K EL ALSALLGD G+L+IPTVPGPPPKLQ + S LE
Sbjct: 304 ISERVSDALRTTGENIDICYSIKRELHDALSALLGDFGVLMIPTVPGPPPKLQTNTSDLE 363
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+FRARAFSLLSIAGVSGFCQVSIPLG+++NLP++ISL+A+HG+D FLL+LVE+L++++++
Sbjct: 364 IFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADKFLLHLVESLYDSIED 423
Query: 426 ELQRM 430
Q +
Sbjct: 424 RKQHI 428
>gi|449518011|ref|XP_004166037.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 428
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 302/421 (71%), Positives = 354/421 (84%), Gaps = 1/421 (0%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
YGAFMEKF+LQPSS + QLPL+GLTFA+KDIFD+DGHVTGFGNP+W RTH A TAP V
Sbjct: 6 YGAFMEKFLLQPSSPSDQLPLTGLTFAVKDIFDMDGHVTGFGNPEWLRTHPPANHTAPTV 65
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+L GGAT IG+TIMDEMAYSINGEN HYGTP NPCA DRVPGGSSSGSAVAVGA LVD
Sbjct: 66 STILRGGATCIGRTIMDEMAYSINGENFHYGTPQNPCASDRVPGGSSSGSAVAVGANLVD 125
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
FSLGTDTGGSVRVPASYCGI GFRPSH AVST+GV+PMAQS DTVGWFA DP +L +VG
Sbjct: 126 FSLGTDTGGSVRVPASYCGILGFRPSHGAVSTSGVVPMAQSMDTVGWFARDPVVLKKVGW 185
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
+LLQ +V +P QV+ AEDC +LSSIPS+R+TQ V SV+KLFGGH I+ V LG+YV
Sbjct: 186 LLLQ-QPEVEHQKPRQVLIAEDCFKLSSIPSERLTQAFVNSVKKLFGGHPIKEVSLGNYV 244
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
++KVPSL+HF+ EGN E+SIPSLAAL+ +++LLQRYEFK NH +WV T P LGPGIS
Sbjct: 245 EEKVPSLKHFMIEGNAGNEHSIPSLAALARSLQLLQRYEFKINHEEWVRTYNPHLGPGIS 304
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
ERV EA+R + + ID+C S++ ELR AL+ALL D G+L IPTVPGPPPKL D S L+ F
Sbjct: 305 ERVSEAMRATDENIDLCHSIRIELRKALAALLEDFGVLAIPTVPGPPPKLNTDVSELQDF 364
Query: 368 RARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
RA+AFSLLSIAGVSGFCQVSIPLGL++ LPV+ISL+A HGSDGFLLN+V +L+NTL+EE+
Sbjct: 365 RAKAFSLLSIAGVSGFCQVSIPLGLYNGLPVSISLVANHGSDGFLLNVVHSLYNTLEEEI 424
Query: 428 Q 428
+
Sbjct: 425 K 425
>gi|449435683|ref|XP_004135624.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 428
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 302/421 (71%), Positives = 354/421 (84%), Gaps = 1/421 (0%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
YGAFMEKF+LQPSS + QLPL+GLTFA+KDIFD+DGHVTGFGNP+W RTH A TAP V
Sbjct: 6 YGAFMEKFLLQPSSPSDQLPLTGLTFAVKDIFDMDGHVTGFGNPEWLRTHPPANHTAPTV 65
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+L GGAT IG+TIMDEMAYSINGEN HYGTP NPCA DRVPGGSSSGSAVAVGA LVD
Sbjct: 66 STILRGGATCIGRTIMDEMAYSINGENFHYGTPQNPCASDRVPGGSSSGSAVAVGANLVD 125
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
FSLGTDTGGSVRVPASYCGI GFRPSH AVST+GV+PMAQS DTVGWFA DP +L +VG
Sbjct: 126 FSLGTDTGGSVRVPASYCGILGFRPSHGAVSTSGVVPMAQSMDTVGWFARDPVVLKKVGW 185
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
+LLQ +V +P QV+ AEDC +LSSIPS+R+TQ V SV+KLFGGH I+ V LG+YV
Sbjct: 186 LLLQ-QPEVEHQKPRQVLIAEDCFKLSSIPSERLTQAFVNSVKKLFGGHPIKEVSLGNYV 244
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
++KVPSL+HF+ EGN E+SIPSLAAL+ +++LLQRYEFK NH +WV T P LGPGIS
Sbjct: 245 EEKVPSLKHFMIEGNAGNEHSIPSLAALARSLQLLQRYEFKINHEEWVRTYNPHLGPGIS 304
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
ERV EA+R + + ID+C S++ ELR AL+ALL D G+L IPTVPGPPPKL D S L+ F
Sbjct: 305 ERVSEAMRATDENIDLCHSIRIELRKALAALLEDFGVLAIPTVPGPPPKLNTDVSELQDF 364
Query: 368 RARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
RA+AFSLLSIAGVSGFCQVSIPLGL++ LPV+ISL+A HGSDGFLLN+V +L+NTL+EE+
Sbjct: 365 RAKAFSLLSIAGVSGFCQVSIPLGLYNGLPVSISLVANHGSDGFLLNVVHSLYNTLEEEV 424
Query: 428 Q 428
+
Sbjct: 425 K 425
>gi|357441631|ref|XP_003591093.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|355480141|gb|AES61344.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|388518579|gb|AFK47351.1| unknown [Medicago truncatula]
Length = 423
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 292/420 (69%), Positives = 362/420 (86%), Gaps = 1/420 (0%)
Query: 6 SDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
SDYGAFMEKF+L P+SS+ PL+ LTFA+KDIFDV G+V GFGNPDWARTH AATSTAP
Sbjct: 5 SDYGAFMEKFILPPNSSSPDFPLNSLTFAVKDIFDVKGYVAGFGNPDWARTHQAATSTAP 64
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
VLA+LS GAT +GKT+MDEMAYSINGEN HYGTP NPCA DRVPGGSSSGSAVAVGAKL
Sbjct: 65 TVLAILSAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAEDRVPGGSSSGSAVAVGAKL 124
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
VDFSLGTDTGGSVRVPASYCGIFGFRPSH +S +GV+PMAQSFDTVGWFA DPKIL+ V
Sbjct: 125 VDFSLGTDTGGSVRVPASYCGIFGFRPSHGRISKSGVVPMAQSFDTVGWFARDPKILSAV 184
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
G VLLQ + + +RP+Q+I AEDC QLSS+P D V++ ++K+++KL+G ++ LG+
Sbjct: 185 GHVLLQ-SPRITPIRPTQIIIAEDCFQLSSVPFDVVSRIVIKAIQKLYGDGLLRYEFLGE 243
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
YVK +VP L+HF+S+ +Q Y+IPSLAALSSAMRLLQRYEFKNNHG+W+ VKP+LGPG
Sbjct: 244 YVKAQVPGLKHFMSQEKTDQIYNIPSLAALSSAMRLLQRYEFKNNHGEWINAVKPELGPG 303
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
ISERV +A+RT+ + ID+C+S+ ELR AL++LLGD G+L+IPTVPGPPPKLQ + S LE
Sbjct: 304 ISERVSDALRTTEENIDICRSIIRELRDALTSLLGDFGVLMIPTVPGPPPKLQTNSSDLE 363
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+FRARAFSLLSI GVSGFCQVSIPLG++++LP ++SL+A++G+D FLL+LVE++++ +++
Sbjct: 364 IFRARAFSLLSIVGVSGFCQVSIPLGMYNDLPASVSLVARNGADEFLLHLVESIYDNIEK 423
>gi|215272285|dbj|BAG84637.1| indole-3-acetamide hydrolase [Nicotiana tabacum]
Length = 425
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/422 (70%), Positives = 347/422 (82%), Gaps = 2/422 (0%)
Query: 7 DYGAFMEKFVLQP-SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
+YGA +EKF LQP SS+ QLPL+GLTFA+KDIFDV+GH+TGFGNPDWA+THSAATSTA
Sbjct: 5 EYGALIEKFTLQPICSSSEQLPLNGLTFAVKDIFDVEGHITGFGNPDWAKTHSAATSTAT 64
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
VL +L GAT I KT+MDEMAYSINGEN HYGTP NP +PDRVPGGSSSGSAVAVGAKL
Sbjct: 65 TVLTLLKAGATCIAKTVMDEMAYSINGENVHYGTPVNPVSPDRVPGGSSSGSAVAVGAKL 124
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
VDFSLGTDTGGSVRVPASYCGI+G RPSH VST GV PMAQSFDTVGWFA DP IL +V
Sbjct: 125 VDFSLGTDTGGSVRVPASYCGIYGIRPSHGVVSTVGVTPMAQSFDTVGWFARDPLILKQV 184
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
GRVLLQ + VN V P+ +I AEDC +L S+++ + LV SVEKL+G H+I+ +GD
Sbjct: 185 GRVLLQ-SPQVNSVHPTNIIIAEDCFKLLDSKSNQLIEVLVSSVEKLYGSHMIKYASVGD 243
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
++ VPSL+ F++ G E IPSL ALS+AMRLLQRYEFK NHG+WV+TVKP LGPG
Sbjct: 244 CIEGNVPSLKKFMTLGTGNDESYIPSLLALSAAMRLLQRYEFKENHGEWVSTVKPSLGPG 303
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
I+ERVWEA++ + + IDVC SVK ELRAAL+ALLGD GIL IPTVPGPPPKL+ D SALE
Sbjct: 304 IAERVWEALKATDENIDVCHSVKAELRAALTALLGDSGILAIPTVPGPPPKLRTDTSALE 363
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
FR +AFSLLSIAGVSGFCQVSIPLG+ DNLP+++SLL KHGSD LL+ VE +HN LK
Sbjct: 364 GFRVKAFSLLSIAGVSGFCQVSIPLGMQDNLPISVSLLGKHGSDWLLLDAVEAIHNVLKG 423
Query: 426 EL 427
++
Sbjct: 424 QI 425
>gi|297843692|ref|XP_002889727.1| hypothetical protein ARALYDRAFT_888131 [Arabidopsis lyrata subsp.
lyrata]
gi|297335569|gb|EFH65986.1| hypothetical protein ARALYDRAFT_888131 [Arabidopsis lyrata subsp.
lyrata]
Length = 425
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/419 (68%), Positives = 347/419 (82%), Gaps = 5/419 (1%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLP-LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
++D+GAF+EK + P+S++ P L GLTFAIKDIFDV+G VTGFGNPDW RTH+AATST
Sbjct: 4 NNDFGAFIEKVTISPTSTSSLPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHTAATST 63
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
AP V ++L GAT++G TIMDEMAYSINGEN HYGTP NP A DRVPGGSSSGSAV V A
Sbjct: 64 APVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVVVAA 123
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
+LVDFS+GTDTGGSVRVPASYCGIFGFRPSH AVST GV PMAQSFDTVGWFA D L
Sbjct: 124 RLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVTPMAQSFDTVGWFARDTATLK 183
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH-IIENVI 242
RVG VLLQ D +N + PSQ+I A+DC +L S+P D + Q LV SVEK FGG+ +++ V
Sbjct: 184 RVGCVLLQ-QDHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKEVN 242
Query: 243 LGDYVKDKVPSLQHFLSEGN--KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKP 300
LG+Y++ VPSL+HF++ + +QE IPSL ALSS+MRLLQR+EFK NHG W++ VKP
Sbjct: 243 LGEYIEQNVPSLKHFMTSDDVTTQQELCIPSLMALSSSMRLLQRHEFKINHGAWISLVKP 302
Query: 301 DLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
+ GPGIS R+ EA+RTS +KID+C+SVK+EL ALS LLG+ G+LVIPTVPGPPP LQ +
Sbjct: 303 EFGPGISARIEEAIRTSEEKIDLCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQAN 362
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ALE FR+RAFSLLSIAGVSGFCQVSIPLGLH+NLPV++SL+AK+GSDGFLL+LV++L
Sbjct: 363 VAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFLLSLVDSL 421
>gi|18390964|ref|NP_563831.1| amidase 1 [Arabidopsis thaliana]
gi|75262859|sp|Q9FR37.1|AMI1_ARATH RecName: Full=Amidase 1; Short=AtAMI1; AltName: Full=Translocon at
the outer membrane of chloroplasts 64-I; Short=AtTOC64-I
gi|11493702|gb|AAG35612.1|AF202077_1 amidase [Arabidopsis thaliana]
gi|14335038|gb|AAK59783.1| At1g08980/F7G19_15 [Arabidopsis thaliana]
gi|28416539|gb|AAO42800.1| At1g08980/F7G19_15 [Arabidopsis thaliana]
gi|332190257|gb|AEE28378.1| amidase 1 [Arabidopsis thaliana]
Length = 425
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/419 (68%), Positives = 348/419 (83%), Gaps = 5/419 (1%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLP-LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
++D+GAF+EK + P+S++ P L GLTFAIKDIFDV+G VTGFGNPDW RTHSAATST
Sbjct: 4 NNDFGAFIEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATST 63
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
AP V ++L GAT++G TIMDEMAYSINGEN HYGTP NP A DRVPGGSSSGSAVAV A
Sbjct: 64 APVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAA 123
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
+LVDFS+GTDTGGSVRVPASYCGIFGFRPSH AVST G+ PMAQSFDTVGWFA D L
Sbjct: 124 RLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATLK 183
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH-IIENVI 242
RVG VLLQ +N + PSQ+I A+DC +L S+P D + Q LV SVEK FGG+ +++ V
Sbjct: 184 RVGCVLLQ-QHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKKVN 242
Query: 243 LGDYVKDKVPSLQHFLSEGN--KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKP 300
LG+Y+ VPSL+HF++ + +QE+ IPSL ALSS+MRLLQR+EFK NHG W+++VKP
Sbjct: 243 LGEYIGQNVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRHEFKINHGAWISSVKP 302
Query: 301 DLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
+ GPGISER+ EA+RTS +KID C+SVK+EL ALS LLG+ G+LVIPTVPGPPP LQ +
Sbjct: 303 EFGPGISERIEEAIRTSDEKIDHCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQAN 362
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ALE FR+RAFSLLSIAGVSGFCQVSIPLGLH+NLPV++SL+AK+GSDGFLL+LV++L
Sbjct: 363 VAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFLLSLVDSL 421
>gi|449435685|ref|XP_004135625.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 430
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/424 (66%), Positives = 342/424 (80%), Gaps = 3/424 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAF+EKF+LQ SS + +LPLSGLTFA+KDIFD++G+V GFGNP+W RTH A TAPA
Sbjct: 5 DYGAFIEKFLLQMSSPSDKLPLSGLTFAVKDIFDIEGYVAGFGNPEWLRTHPPANQTAPA 64
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VL +L GGAT IGKTIMDEMA+SINGEN HYGTP NP A DR+PGGSSSGS VAV AKLV
Sbjct: 65 VLTILRGGATCIGKTIMDEMAFSINGENFHYGTPQNPHASDRIPGGSSSGSGVAVAAKLV 124
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLGTDTGGSVRVPASYCGI GFRPSH VST+GVIPM QSFDTVGWFA D IL RVG
Sbjct: 125 DFSLGTDTGGSVRVPASYCGILGFRPSHGVVSTSGVIPMTQSFDTVGWFARDSAILKRVG 184
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQ-LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
+LLQ ++ +P++V AEDC + LS+I S+R+TQ V SVEKLFGGH+I+ + LG
Sbjct: 185 WLLLQ-EPEIEHYKPTKVFIAEDCFKLLSNITSERLTQAFVSSVEKLFGGHLIKQISLGK 243
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
YV+DKVPSL+HF+ E N ++SIPSLAAL + R LQR+EF NHG+WV + LGPG
Sbjct: 244 YVEDKVPSLKHFMIEENDGYKHSIPSLAALVRSKRFLQRHEFNINHGEWVRSYHSHLGPG 303
Query: 306 ISERVWEAVR-TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
ISER+ E +R + + ID+ +S++ ELR AL+ALL D G+L IPTVPGPPPKL D S
Sbjct: 304 ISERILEFIREVTDENIDLSRSIQIELREALAALLEDFGVLAIPTVPGPPPKLNTDISEQ 363
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
FRA+AFSLL+IA VSG CQVS+PLGL++ LPV+ISLLAKHG+DGFLLNLV++L++TLK
Sbjct: 364 YDFRAKAFSLLTIAAVSGVCQVSVPLGLYNGLPVSISLLAKHGADGFLLNLVDSLYSTLK 423
Query: 425 EELQ 428
EE++
Sbjct: 424 EEVE 427
>gi|449518013|ref|XP_004166038.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 430
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 283/424 (66%), Positives = 342/424 (80%), Gaps = 3/424 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAF+EKF+LQ SS + +LPLSGLTFA+KDIFD++G+V GFGNP+W RTH A TAPA
Sbjct: 5 DYGAFIEKFLLQMSSPSDKLPLSGLTFAVKDIFDIEGYVAGFGNPEWLRTHPPANQTAPA 64
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VL +L GGAT IGKTIMDEMA+SINGEN HYGTP NP A DR+PGGSSSGS VAV AKLV
Sbjct: 65 VLTILRGGATCIGKTIMDEMAFSINGENFHYGTPQNPHASDRIPGGSSSGSGVAVAAKLV 124
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLGTDTGGSVRVPASYCGI GFRPSH VST+GVIPM QSFDTVGWFA D IL RVG
Sbjct: 125 DFSLGTDTGGSVRVPASYCGILGFRPSHGVVSTSGVIPMTQSFDTVGWFARDSAILKRVG 184
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQ-LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
+LLQ ++ +P++V AEDC + LS+I S+R+TQ V SVEKLFGGH+I+ + LG
Sbjct: 185 WLLLQ-EPEIEHYKPTKVFIAEDCFKLLSNITSERLTQAFVSSVEKLFGGHLIKQISLGK 243
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
YV+DKVPSL+HF+ E N ++SIPSLAAL + R LQR+EF NHG+WV + LGPG
Sbjct: 244 YVEDKVPSLKHFMIEENDGYKHSIPSLAALVRSKRFLQRHEFNINHGEWVRSYHSHLGPG 303
Query: 306 ISERVWEAVR-TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
ISER+ E +R + + ID+ +S++ ELR AL+AL+ D G+L IPTVPGPPPKL D S
Sbjct: 304 ISERILEFIREVTDENIDLSRSIQIELREALAALVEDFGVLAIPTVPGPPPKLNTDISEQ 363
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
FRA+AFSLL+IA VSG CQVS+PLGL++ LPV+ISLLAKHG+DGFLLNLV++L++TLK
Sbjct: 364 YDFRAKAFSLLTIAAVSGVCQVSVPLGLYNGLPVSISLLAKHGADGFLLNLVDSLYSTLK 423
Query: 425 EELQ 428
EE++
Sbjct: 424 EEVE 427
>gi|242046326|ref|XP_002461034.1| hypothetical protein SORBIDRAFT_02g039510 [Sorghum bicolor]
gi|241924411|gb|EER97555.1| hypothetical protein SORBIDRAFT_02g039510 [Sorghum bicolor]
Length = 437
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/423 (62%), Positives = 322/423 (76%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAFMEKF L P S LPL GLTFAIKDIFD+ G VTGFGNPDWARTH+ A +T+P
Sbjct: 6 DYGAFMEKFELLPPQSQQHLPLHGLTFAIKDIFDISGRVTGFGNPDWARTHAPAGATSPV 65
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VLA L+ GA SIGKT+MDEMAYSINGEN HYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV
Sbjct: 66 VLATLAAGAISIGKTVMDEMAYSINGENAHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 125
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DF+LGTDTGGSVRVPA+YCGIFG RPSH VST VIPM+Q FDTVGWFA D L+RV
Sbjct: 126 DFALGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMSQMFDTVGWFARDLSTLSRVS 185
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
VLL L D + RP+ +DC ++ +D+ Q L SV K FG ++N LG++
Sbjct: 186 NVLLPLPADNTIKRPTHFKIPKDCFEILGSLNDQTYQILNASVAKRFGNDAVDNRNLGEF 245
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
V VP++ F+S+ ++ + S+P+L+ +S MR LQR EFK NH +WV TV+P+LGPGI
Sbjct: 246 VSSNVPTVGKFISDFSRSEAPSVPALSVISYVMRCLQRSEFKANHAEWVNTVRPNLGPGI 305
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
ERV+EA+ + ++ +KTE + ALSAL+ D GILVIPTVPG PPKL+M+ ALE
Sbjct: 306 RERVYEAIASEDGPMEDFHVLKTEFKLALSALIKDDGILVIPTVPGSPPKLRMEAVALEN 365
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
FRARAFSLLSIAG+SGFCQ+SIPLG+ +PV++SL+A HG+D FLL++ + L+ TLKEE
Sbjct: 366 FRARAFSLLSIAGLSGFCQLSIPLGVRGGVPVSVSLVACHGADRFLLSVAQELYETLKEE 425
Query: 427 LQR 429
++
Sbjct: 426 TKK 428
>gi|293337129|ref|NP_001170670.1| uncharacterized protein LOC100384731 [Zea mays]
gi|238006782|gb|ACR34426.1| unknown [Zea mays]
gi|414590908|tpg|DAA41479.1| TPA: hypothetical protein ZEAMMB73_492598 [Zea mays]
Length = 444
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/431 (61%), Positives = 328/431 (76%), Gaps = 2/431 (0%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQ--LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHS 58
M D +YGAFMEKF + PS S HQ LPL GLTFAIKDIFD+ G VTGFGNPDWARTH+
Sbjct: 3 MGLEDGEYGAFMEKFKMLPSQSQHQQQLPLHGLTFAIKDIFDIGGRVTGFGNPDWARTHA 62
Query: 59 AATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSA 118
A +T+P VLA L+ GA SIGKT+MDEMAYSINGEN HYGTPTNPCAPDRVPGGSSSGSA
Sbjct: 63 PAGATSPVVLAALAAGAISIGKTVMDEMAYSINGENAHYGTPTNPCAPDRVPGGSSSGSA 122
Query: 119 VAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWD 178
VAV AKLVDF+LGTDTGGSVRVPA+YCGIFG RPSH VST VIPM+Q FDTVGWFA D
Sbjct: 123 VAVAAKLVDFALGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMSQMFDTVGWFARD 182
Query: 179 PKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII 238
+L+ V VLL LA D + +P+ V +DC ++ SD+ Q L SV K FG +
Sbjct: 183 LSMLSCVSNVLLPLAADNTIKQPTHVTIPKDCFEILGSLSDQTYQILNASVAKRFGNDAV 242
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
+N LG++V VP++ F+S+ ++ + S+P+L+ +S MR LQR EFK NHG+WV TV
Sbjct: 243 DNRNLGEFVSANVPTVGKFISDFSRSEAPSVPALSVISYVMRCLQRSEFKANHGEWVKTV 302
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
KP+LGPGI ERV EA+ + ++ +KTE ++ALSAL+ D GIL IPTVPG PPKL+
Sbjct: 303 KPNLGPGIRERVHEAIASEDGPMEDFHVLKTEFKSALSALIKDDGILAIPTVPGSPPKLR 362
Query: 359 MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVET 418
M+ ALE FRARAFSLLSIAG+SGFCQ+SIPLG+ +PV++SL+A HG+D FLL++ +
Sbjct: 363 MEAVALENFRARAFSLLSIAGLSGFCQLSIPLGVRHGVPVSVSLVACHGADRFLLSVAQE 422
Query: 419 LHNTLKEELQR 429
L+ TLK+E ++
Sbjct: 423 LYGTLKQETKK 433
>gi|224285989|gb|ACN40706.1| unknown [Picea sitchensis]
Length = 458
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/428 (57%), Positives = 316/428 (73%), Gaps = 6/428 (1%)
Query: 6 SDYGAFMEKFVLQPSSSAHQLPL----SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
D+GAF E+ L P +GLTFAIK+IFD++G+VTGFGNPDW +TH A
Sbjct: 30 EDFGAFTERIQLLPPPQPSPPESPYPLTGLTFAIKEIFDIEGYVTGFGNPDWQQTHEPAA 89
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
TAP V V+ GGAT +G+T+MDEMAYSINGENKHYGTPTNP AP R+PGGSSSGSAVAV
Sbjct: 90 QTAPVVTFVVQGGATCVGRTVMDEMAYSINGENKHYGTPTNPAAPSRIPGGSSSGSAVAV 149
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
A+LVDF+LGTDTGGSVRVPAS+CGI GFRPSH AVST GV+PMAQSFDTVG F DP I
Sbjct: 150 AAELVDFALGTDTGGSVRVPASFCGILGFRPSHGAVSTVGVVPMAQSFDTVGLFTRDPNI 209
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
L VG +LLQL + +P +I A+DC QL+ IP+D+ + +S EKLFG ++ ++
Sbjct: 210 LRHVGHILLQLP-FMEYRQPRGIIIADDCFQLTKIPNDQTVNVVTRSTEKLFGRQVLNHI 268
Query: 242 ILGDYVKDKVPSLQHFLS-EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKP 300
LG+Y+ +VPSL++F + E +++ E I +L AL SA+RLLQRYEFK NH +W+ +VKP
Sbjct: 269 SLGEYIATEVPSLKYFQNEEESRDGECGISALKALCSALRLLQRYEFKMNHEEWINSVKP 328
Query: 301 DLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
DLGPGIS RV A+ T+ + I+ C K E R A+++LL D IL+IPT PGP PKL M
Sbjct: 329 DLGPGISGRVRAALETNNENIEHCLKAKDEAREAVNSLLKDDAILIIPTTPGPAPKLNMK 388
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
LE FR RAF+LL I+G+SG CQVSIP+G HD P+A+S++A+HG D FLL+ V ++
Sbjct: 389 EMLLEEFRIRAFTLLCISGMSGCCQVSIPVGQHDKCPLAVSMMARHGGDRFLLDTVRAMY 448
Query: 421 NTLKEELQ 428
TL+EE++
Sbjct: 449 PTLQEEVK 456
>gi|125547023|gb|EAY92845.1| hypothetical protein OsI_14646 [Oryza sativa Indica Group]
Length = 435
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/424 (61%), Positives = 325/424 (76%), Gaps = 3/424 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAFME+FVL P S L GLTFAIKDIFD+ G VTGFGNPDWARTH+ A +T+P
Sbjct: 10 DYGAFMERFVLPPPPSQQLP-LHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPV 68
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VLA L+ GATS+G TIMDEMAYSINGEN HYGTPTNPCAP RVPGGSSSGSAVAV A LV
Sbjct: 69 VLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVAVAANLV 128
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLGTDTGGSVRVPA+YCGIFG RPSH VS VIPMAQ FDTVGWF+ D L+RV
Sbjct: 129 DFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLSTLSRVT 188
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
+VLL L DD+ + +P+QV DC Q+ +DR Q + SV K F II+N LGD+
Sbjct: 189 KVLLPLPDDI-VKQPTQVTIPMDCFQILGSLNDRTYQIINASVAKRFDSQIIDNRNLGDF 247
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ D VPS+ F+++ ++ + S+P+L+ +S MR LQR +FK NH +WV TVKP+LGPG+
Sbjct: 248 ISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPNLGPGL 307
Query: 307 SERVWEAVRT-SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
ER+ EA+ + + ++ Q+++ E ++AL+ALL DHGIL IPTVPGPPPK+ M+ + LE
Sbjct: 308 RERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGMEAAPLE 367
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
FRARAFSLLSIAG+SGFCQVSIPLG+ + LPV++SL+A+HG+D FLLN+VE L+ TL +
Sbjct: 368 NFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELYQTLID 427
Query: 426 ELQR 429
E +
Sbjct: 428 EATK 431
>gi|116308869|emb|CAH66005.1| H0613H07.3 [Oryza sativa Indica Group]
Length = 435
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/424 (61%), Positives = 325/424 (76%), Gaps = 3/424 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAFME+FVL P S L GLTFAIKDIFD+ G VTGFGNPDWARTH+ A +T+P
Sbjct: 10 DYGAFMERFVLPPPPSQQLP-LHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPV 68
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VLA L+ GATS+G TIMDEMAYSINGEN HYGTPTNPCAP RVPGGSSSGSAVAV A LV
Sbjct: 69 VLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVAVAANLV 128
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLGTDTGGSVRVPA+YCGIFG RPSH VS VIPMAQ FDTVGWF+ D L+RV
Sbjct: 129 DFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLSTLSRVT 188
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
+VLL L DD+ + +P+QV DC Q+ +DR Q + SV K F II+N LGD+
Sbjct: 189 KVLLPLPDDI-VKQPTQVTIPMDCFQILGSLNDRTYQIINASVAKRFDSQIIDNRNLGDF 247
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ D VPS+ F+++ ++ + S+P+L+ +S MR LQR +FK NH +WV TVKP+LGPG+
Sbjct: 248 ISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPNLGPGL 307
Query: 307 SERVWEAVRT-SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
ER+ EA+ + + ++ Q+++ E ++AL+ALL DHGIL IPTVPGPPPK+ M+ + LE
Sbjct: 308 RERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGMEAAPLE 367
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
FRARAFSLLSIAG+SGFCQVSIPLG+ + LPV++SL+A+HG+D FLLN+VE L+ TL +
Sbjct: 368 NFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELYQTLID 427
Query: 426 ELQR 429
E +
Sbjct: 428 EATK 431
>gi|115456912|ref|NP_001052056.1| Os04g0118100 [Oryza sativa Japonica Group]
gi|32451277|emb|CAE01284.1| OSJNBa0020P07.1 [Oryza sativa Japonica Group]
gi|113563627|dbj|BAF13970.1| Os04g0118100 [Oryza sativa Japonica Group]
Length = 435
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/424 (61%), Positives = 324/424 (76%), Gaps = 3/424 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAFME+FVL P S L GLTFAIKDIFD+ G VTGFGNPDWARTH+ A +T+P
Sbjct: 10 DYGAFMERFVLPPPPSQQLP-LHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPV 68
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VLA L+ GATS+G TIMDEMAYSINGEN HYGTPTNPCAP RVPGGSSSGSAVAV A LV
Sbjct: 69 VLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVAVAANLV 128
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLGTDTGGSVRVPA+YCGIFG RPSH VS VIPMAQ FDTVGWF+ D L+RV
Sbjct: 129 DFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLSTLSRVT 188
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
+VLL L DD+ + +P+QV DC Q+ DR Q + SV K F I++N LGD+
Sbjct: 189 KVLLPLPDDI-VKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDNRNLGDF 247
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ D VPS+ F+++ ++ + S+P+L+ +S MR LQR +FK NH +WV TVKP+LGPG+
Sbjct: 248 ISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPNLGPGL 307
Query: 307 SERVWEAVRT-SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
ER+ EA+ + + ++ Q+++ E ++AL+ALL DHGIL IPTVPGPPPK+ M+ + LE
Sbjct: 308 RERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGMEAAPLE 367
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
FRARAFSLLSIAG+SGFCQVSIPLG+ + LPV++SL+A+HG+D FLLN+VE L+ TL +
Sbjct: 368 NFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELYQTLID 427
Query: 426 ELQR 429
E +
Sbjct: 428 EATK 431
>gi|222628276|gb|EEE60408.1| hypothetical protein OsJ_13590 [Oryza sativa Japonica Group]
Length = 416
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/424 (58%), Positives = 308/424 (72%), Gaps = 22/424 (5%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAFME+FVL P S L GLTFAIKDIFD+ G VTGFGNPDWARTH+ A +T+P
Sbjct: 10 DYGAFMERFVLPPPPSQQLP-LHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPV 68
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
VLA +INGEN HYGTPTNPCAP RVPGGSSSGSAVAV A LV
Sbjct: 69 VLA-------------------AINGENTHYGTPTNPCAPGRVPGGSSSGSAVAVAANLV 109
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLGTDTGGSVRVPA+YCGIFG RPSH VS VIPMAQ FDTVGWF+ D L+RV
Sbjct: 110 DFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLSTLSRVT 169
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
+VLL L DD+ + +P+QV DC Q+ DR Q + SV K F I++N LGD+
Sbjct: 170 KVLLPLPDDI-VKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDNRNLGDF 228
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ D VPS+ F+++ ++ + S+P+L+ +S MR LQR +FK NH +WV TVKP+LGPG+
Sbjct: 229 ISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPNLGPGL 288
Query: 307 SERVWEAVRT-SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
ER+ EA+ + + ++ Q+++ E ++AL+ALL DHGIL IPTVPGPPPK+ M+ + LE
Sbjct: 289 RERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGMEAAPLE 348
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
FRARAFSLLSIAG+SGFCQVSIPLG+ + LPV++SL+A+HG+D FLLN+VE L+ TL +
Sbjct: 349 NFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELYQTLID 408
Query: 426 ELQR 429
E +
Sbjct: 409 EATK 412
>gi|357166870|ref|XP_003580892.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Brachypodium distachyon]
Length = 440
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/435 (59%), Positives = 320/435 (73%), Gaps = 7/435 (1%)
Query: 1 MASRDSDYGAFMEKFVL---QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTH 57
M D+GAFMEKF+L P+ QLPL GLTFAIKDIFD+ G VTGFGNPDW+RTH
Sbjct: 1 MEEAKGDHGAFMEKFLLLPLPPTEEQQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWSRTH 60
Query: 58 SAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGS 117
A +TAPAVLA+L+ GA ++G+T+MDEMAYSINGEN HYGTP NPCAPDRVPGGSSSGS
Sbjct: 61 GPAAATAPAVLALLAAGAAAVGRTVMDEMAYSINGENAHYGTPANPCAPDRVPGGSSSGS 120
Query: 118 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
AVAV A L DFSLGTDTGGSVRVPA+YCGIFG RPSH VST VIPMAQ FDTVGWFA
Sbjct: 121 AVAVAASLADFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMAQMFDTVGWFAR 180
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQ-LSSIPSDRVTQGLVKSVEKLFGGH 236
D L+RV VLL L D RPS+V+ DC + L S D + L S K+FG
Sbjct: 181 DLATLSRVSNVLLPLPADEGR-RPSRVMIPADCFEILGSSVDDHTYEILNASAAKIFGSD 239
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYS-IPSLAALSSAMRLLQRYEFKNNHGDWV 295
++N LGD+V +PS+ F+S E + +P+L+A+S MR LQR EFK NH +WV
Sbjct: 240 AVDNRNLGDFVSSNIPSIGKFMSSAASVDEATCVPALSAISHVMRCLQRSEFKANHAEWV 299
Query: 296 TTVKPDLGPGISERVWEAVRTSAQKI-DVCQSVKTELRAALSALLGDHGILVIPTVPGPP 354
TVKP+LG GI ERV EA+ ++ + + + +V+TE + AL+ALL ++GIL IPTVPG P
Sbjct: 300 NTVKPNLGLGIRERVEEAIASADEPVMEDLHAVRTEFKTALAALLKENGILAIPTVPGAP 359
Query: 355 PKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
PKL+M+ LE FR+RAFSLLSIAG+SGFCQVSIPLG D +PV++SLLA+HG+D FL+
Sbjct: 360 PKLRMEAVKLENFRSRAFSLLSIAGLSGFCQVSIPLGTRDGVPVSVSLLARHGADHFLIG 419
Query: 415 LVETLHNTLKEELQR 429
+ + L+++L++E R
Sbjct: 420 VAQELYDSLRDEAVR 434
>gi|297602073|ref|NP_001052054.2| Os04g0117800 [Oryza sativa Japonica Group]
gi|116308868|emb|CAH66004.1| H0613H07.2 [Oryza sativa Indica Group]
gi|125547022|gb|EAY92844.1| hypothetical protein OsI_14645 [Oryza sativa Indica Group]
gi|125589165|gb|EAZ29515.1| hypothetical protein OsJ_13589 [Oryza sativa Japonica Group]
gi|215769387|dbj|BAH01616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675132|dbj|BAF13968.2| Os04g0117800 [Oryza sativa Japonica Group]
Length = 434
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/428 (58%), Positives = 307/428 (71%), Gaps = 6/428 (1%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLS--GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D+GAFME+FVL P L GLTFAIKDIFD+ G VTGFGNPDWARTH+ A +T+
Sbjct: 4 DFGAFMERFVLPPPPPPSSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATS 63
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P VLA L+ GATS+G TIMDEMAYSI GEN HYGTP NPCAP RVPGGSSSGSAVAV A
Sbjct: 64 PVVLAALAAGATSLGTTIMDEMAYSIYGENAHYGTPANPCAPGRVPGGSSSGSAVAVAAN 123
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
LVDFSLGTDTGGSVRVPA+YCGIFG R SH VS VIPMAQ FDTVGWFA D L+R
Sbjct: 124 LVDFSLGTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVIPMAQMFDTVGWFARDLSTLSR 183
Query: 185 VGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
V +VLL L DD + P+ V DC Q+ P D Q + SV K FG H I+N LG
Sbjct: 184 VTKVLLPLPDD-TVKHPTHVTIPMDCFQILGSPDDHTYQIVNASVAKKFGSHAIDNANLG 242
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGP 304
D+V D VPS+ F+++ ++ + S+P+L+ +S M L R +FK NH +WV +VKP+LGP
Sbjct: 243 DFVSDNVPSIGKFIADFSESELPSVPALSVISHVMFSLLRSQFKANHAEWVNSVKPNLGP 302
Query: 305 GISERVWEAVRT-SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK--LQMDP 361
G+ E + AV + + ++ +V+ E ++AL+ALL DHGIL IPTVPGPPP +Q
Sbjct: 303 GLRENIHGAVASGDDEPLEEFLAVRAEFKSALAALLKDHGILAIPTVPGPPPMVGIQAQA 362
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ L+ ++ARAFSLL IA VSGFCQVSIPLG + LPV++SL+A+HG+D FLLN+ E L+
Sbjct: 363 APLDNYQARAFSLLDIAVVSGFCQVSIPLGKRNGLPVSVSLVARHGADHFLLNVAEELYQ 422
Query: 422 TLKEELQR 429
TL +E +
Sbjct: 423 TLIDEAAK 430
>gi|44662989|gb|AAS47585.1| chloroplast Toc64-2 [Physcomitrella patens]
Length = 585
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/401 (55%), Positives = 291/401 (72%), Gaps = 11/401 (2%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
GLTFA+KDIFDV+G +TGFGNP WA TH AT TAPAV ++ GA +GK MDE+AYS
Sbjct: 63 GLTFAVKDIFDVEGFITGFGNPVWAETHEPATVTAPAVKVLVEAGAKCVGKLHMDELAYS 122
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
INGENKHYGTP NP AP+R+PGGSSSGSAVAV A VDFSLGTDTGGSVRVPA++CGI G
Sbjct: 123 INGENKHYGTPVNPAAPNRIPGGSSSGSAVAVAANCVDFSLGTDTGGSVRVPAAFCGILG 182
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
FRPSH A+S +GV+PMAQSFDTVGWFA DPK L +VG LLQL + +P +V+ A+D
Sbjct: 183 FRPSHGAISVSGVLPMAQSFDTVGWFAKDPKTLRQVGHALLQLPYS-DSKQPRRVLIADD 241
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS- 268
C +LS IP++ V +++SV+KL G +++ + LGD+++ VPSL+ E+E S
Sbjct: 242 CFKLSLIPNEDVVGAVIRSVQKLLGRQVLQYINLGDFIRRNVPSLKEL------EKEISN 295
Query: 269 ---IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
I +L L +AM+LLQR+EFK NH +W+ KPDL I+ RV A+ ++ + Q
Sbjct: 296 GSPIGALTLLRTAMQLLQRWEFKENHQEWLENAKPDLSSDIAARVQAALDMKGDQVSLVQ 355
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
++ E R A++ LL + ILV+PTVP PPKL + + FRARAF LLS++G+SG CQ
Sbjct: 356 QIRNEARFAINDLLKNDTILVMPTVPDIPPKLGIKADFPDEFRARAFDLLSVSGMSGCCQ 415
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
VS+P+G ++N+P A+SLLAK GSD FLL+ V T + T++EE
Sbjct: 416 VSVPVGEYNNVPTAVSLLAKRGSDRFLLDTVLTAYPTIQEE 456
>gi|44662987|gb|AAS47584.1| chloroplast Toc64-1 [Physcomitrella patens]
Length = 592
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/424 (55%), Positives = 304/424 (71%), Gaps = 8/424 (1%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D GAF+E F L P + PLSGLTFAIKDIFD++G VTGFGNPDWA TH AT
Sbjct: 37 DNGAFIEYFELLPPPPPPPPSAPHPLSGLTFAIKDIFDIEGFVTGFGNPDWASTHEPATR 96
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
TA AV ++ GAT IGK IMDE+AYSI G+NKHYGTP NP AP+R+PGGSSSGS VAV
Sbjct: 97 TAAAVKVLVEAGATCIGKLIMDELAYSIIGDNKHYGTPVNPAAPNRIPGGSSSGSGVAVA 156
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A LVDFSLGTDT GSVRVPA++CGI GFRPSH AVST GV PMAQS DTVG FA DP IL
Sbjct: 157 ADLVDFSLGTDTAGSVRVPAAFCGILGFRPSHGAVSTVGVTPMAQSLDTVGCFARDPAIL 216
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
+VG +LLQL +++ +P + A+DC ++S IP++ +VKS++KL G +++++
Sbjct: 217 RQVGHILLQLP-YMDVRQPRRFFIADDCFKISLIPTELSLGTVVKSIQKLLGRQVLQHIN 275
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
LGDYV VPSL+ E + + ++ SLA L +AM++LQR+EFK NH +W+TTVKPDL
Sbjct: 276 LGDYVARTVPSLKELQKEIS---DSNLGSLALLRTAMQILQRWEFKLNHEEWLTTVKPDL 332
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P ++ R A+ TS+ + + Q +K E R A+S LL + +LV+PTVP PPKL
Sbjct: 333 APALAARTKLALETSSNLVPLLQKIKDETRYAISELLKNDSLLVMPTVPDIPPKLNTKAE 392
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
ALEVFR + L+ +AG+S CQV++P G HD +P+A+SLLAK GSD FLL+ V +++T
Sbjct: 393 ALEVFRNKTLDLICVAGMSSCCQVTMPAGNHDGVPMAVSLLAKQGSDRFLLDTVLAIYST 452
Query: 423 LKEE 426
++EE
Sbjct: 453 VQEE 456
>gi|168058781|ref|XP_001781385.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667196|gb|EDQ53832.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/423 (55%), Positives = 303/423 (71%), Gaps = 9/423 (2%)
Query: 7 DYGAFMEKFVLQPS---SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
D GAF+E F L P+ SSA Q PLSGLTFA+KDIFDV+G VTGFGNPDWA TH AT T
Sbjct: 37 DNGAFIEYFELPPATSPSSAPQ-PLSGLTFAVKDIFDVEGFVTGFGNPDWAATHEPATRT 95
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
A AV ++ GAT +GK MDE+AYSI G+NKHYGTP NP AP RVPGGSSSGS VAV A
Sbjct: 96 ALAVKYLVDSGATCVGKLHMDELAYSIIGDNKHYGTPVNPAAPTRVPGGSSSGSGVAVAA 155
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
LVDFSLGTDT GSVRVPA++CGI GFRPSH AV GVIPMAQSFDTVG FA DP IL
Sbjct: 156 DLVDFSLGTDTAGSVRVPAAFCGILGFRPSHGAVPVIGVIPMAQSFDTVGCFAKDPTILR 215
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
+VG +LLQL+ ++ +P + + A+DC +LS IP++ +++S++KLFG ++++ L
Sbjct: 216 QVGHILLQLS-YTDVRKPQRFLIADDCFELSLIPNEASVGAVIRSIQKLFGRKALQHINL 274
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
GDYV VPSL+ KE + +++ L +AM+++QR+EFK NH W+TT P+LG
Sbjct: 275 GDYVASAVPSLKVL----QKEIGSDMGAISLLRTAMQMIQRWEFKVNHEGWLTTANPNLG 330
Query: 304 PGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
P + R A+ T++ + + Q +K E R A++ LL D +LV+PTVP PPKL P +
Sbjct: 331 PATAARTKAALETTSHLLPLLQRIKDEARYAINDLLKDDMLLVLPTVPDIPPKLNTKPES 390
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
LE FR RA L+ IAG+SG CQV++P G HD++P+A+SLLA+ GSD FLL+ + L+ T+
Sbjct: 391 LEEFRNRAMDLICIAGMSGCCQVTMPAGEHDDVPMAVSLLARQGSDRFLLDTLLALYATV 450
Query: 424 KEE 426
+ E
Sbjct: 451 QVE 453
>gi|225456155|ref|XP_002282402.1| PREDICTED: translocon at the outer membrane of chloroplasts 64
[Vitis vinifera]
gi|297734325|emb|CBI15572.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/425 (53%), Positives = 300/425 (70%), Gaps = 8/425 (1%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPL----SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+++ L P + L+FA+ D+FD++G+VTGFGNPDWARTH A+
Sbjct: 33 DFGAFVQRLQLLPPPQPAPPKAPHPLTNLSFAVSDVFDIEGYVTGFGNPDWARTHDTASR 92
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+P V A++ GGAT GKT++DEMAYSINGENKHYGTPTNP AP R+PGGSSSG+AVAV
Sbjct: 93 TSPVVSALVEGGATCTGKTVVDEMAYSINGENKHYGTPTNPAAPSRIPGGSSSGAAVAVA 152
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A VDFSLG DT G VRVPA++CG+ GFRPSH AVS G+I ++ S DTVGWFA DP IL
Sbjct: 153 ANFVDFSLGLDTVGGVRVPAAFCGVIGFRPSHGAVSHMGIIHVSSSLDTVGWFAKDPSIL 212
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
RVG VLLQL V P Q+IFA+DC Q IP DRV Q ++KS EKLFG +++
Sbjct: 213 RRVGHVLLQLTYAVQR-SPRQIIFADDCFQSLRIPVDRVYQVVLKSTEKLFGRQVLKREN 271
Query: 243 LGDYVKDKVPSLQHFLSEG-NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
L +Y+ KVPSL+ F S+ N E S+ + +L M LQR+EFK+NH +W+ +VKP
Sbjct: 272 LENYLDSKVPSLKAFHSQKTNGETRNSL--IRSLVKIMHCLQRHEFKHNHEEWINSVKPI 329
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
L IS ++ + + + +I+ CQS + E+R+AL++LL D GILVIPTV PPPKL
Sbjct: 330 LDASISSQLHDVLEVADTEIENCQSSRMEIRSALNSLLKDDGILVIPTVADPPPKLGGKE 389
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
S E ++ R LLSIA +SG CQV++PLGL+D PV++S +A+HG D FLL+ V+T++
Sbjct: 390 SLSEEYQNRTLGLLSIASMSGCCQVTVPLGLYDKYPVSVSFMARHGGDRFLLDTVQTMYA 449
Query: 422 TLKEE 426
+L+E+
Sbjct: 450 SLQEQ 454
>gi|302811504|ref|XP_002987441.1| hypothetical protein SELMODRAFT_42040 [Selaginella moellendorffii]
gi|300144847|gb|EFJ11528.1| hypothetical protein SELMODRAFT_42040 [Selaginella moellendorffii]
Length = 593
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/416 (53%), Positives = 286/416 (68%), Gaps = 28/416 (6%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GLTFA+KDIFD++G +TGFGNPDW +TH AT TA V ++ GA IGKT MDE+A
Sbjct: 49 LAGLTFAVKDIFDIEGFITGFGNPDWLKTHGPATQTAFVVQLLVRAGAACIGKTHMDELA 108
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YSINGENKHYGTP NP +P+RVPGGSSSGSAVAV A LVDF+LGTDTGGSVRVPA++CGI
Sbjct: 109 YSINGENKHYGTPINPASPNRVPGGSSSGSAVAVAAGLVDFALGTDTGGSVRVPAAFCGI 168
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GFRPSH +ST+GVIPMAQSFDTVGWFA +P +L +VG LLQ + +P +VI A
Sbjct: 169 IGFRPSHGTISTSGVIPMAQSFDTVGWFAKEPNVLRQVGYALLQ-QPFMEPRQPQRVIMA 227
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+DC LSS P +R + + E++ G + N+ +G Y+ K PSLQ F E
Sbjct: 228 DDCFSLSSAPPERTKAVVARCFERVLGKKTMSNMDIGPYLLSKSPSLQAFCDE-----TA 282
Query: 268 SIPSLAALSSAMRLLQRY---------------EFKNNHGDWVTTVKPDLGPGISERVWE 312
S P L LS A+ L+QRY EFK NH W++ V PDLGPGI ERV
Sbjct: 283 SSP-LVGLSKALSLIQRYCFLATASFIACHLRFEFKTNHEAWLSGVNPDLGPGILERVRA 341
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF 372
A++T+A++I + SVK E+ L D +LV+PT PGPPPKL AL+ +R +AF
Sbjct: 342 ALKTTAEEIVLAMSVKAEV------ALQDDVLLVLPTTPGPPPKLNTKGKALDDYREKAF 395
Query: 373 SLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQ 428
+LL+IAG+SG CQVS+P+G D+ P+A S++A+ G D FLL+ V LH +KE+L+
Sbjct: 396 ALLAIAGMSGCCQVSMPVGTFDDAPLAFSVMARQGGDRFLLDAVLALHVMVKEDLK 451
>gi|224118646|ref|XP_002317872.1| amidase family protein [Populus trichocarpa]
gi|222858545|gb|EEE96092.1| amidase family protein [Populus trichocarpa]
Length = 593
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/426 (50%), Positives = 301/426 (70%), Gaps = 6/426 (1%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPL----SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+EK +L P + LTFA+ D+F+++G+V+GFG+P+WA+TH AA+
Sbjct: 34 DFGAFIEKLLLVPPPQPPPPKAPHPLTALTFAVSDLFEIEGYVSGFGHPEWAKTHQAASR 93
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+ V ++ GGAT +GKT++DE+AYSI+GENKHYGTP NP P RVPGGS SG+AVAV
Sbjct: 94 TSLVVSTLVDGGATCVGKTVIDELAYSIHGENKHYGTPINPVVPARVPGGSCSGAAVAVA 153
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A LVDFSLG DT G VRVPA +CG+ GFRPS+ A+S GV+P++ S DTVGWFA DP IL
Sbjct: 154 ANLVDFSLGVDTVGGVRVPAGFCGVIGFRPSYGAISKTGVLPVSASLDTVGWFAKDPNIL 213
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
RVG VLLQ A P Q+I AEDC QL IP DRV Q +V S EK FG ++++ I
Sbjct: 214 RRVGHVLLQPAFG-GQRSPRQIIMAEDCFQLLKIPVDRVAQVVVNSTEKHFGRQVLKHEI 272
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
L Y+ KVPSL+ F ++ K + S+ L+ M+LL RYEF++NH +W+ T KP L
Sbjct: 273 LDVYLNSKVPSLKEFHNK-KKNGDVKTSSIRLLAHVMQLLHRYEFRSNHEEWINTEKPIL 331
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P S ++ E ++ S +I++C+S++ E+R A+++LL D GILV+PT+ PPKL
Sbjct: 332 EPDFSAQMNEIMKISEAEIELCKSIREEMRLAINSLLKDDGILVVPTMAYLPPKLDGKEI 391
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
E +++ +FSLLSIA +SG CQV++PLG +D PV++SL+A+HG+D FLL+ ++T++ +
Sbjct: 392 LSEEYKSSSFSLLSIASLSGCCQVTVPLGYYDKCPVSVSLIARHGNDRFLLDTLQTMYAS 451
Query: 423 LKEELQ 428
L+E+ +
Sbjct: 452 LQEQAE 457
>gi|356512970|ref|XP_003525187.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 587
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/425 (53%), Positives = 299/425 (70%), Gaps = 8/425 (1%)
Query: 7 DYGAFMEKFVLQPSSSAHQL----PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+ K L P PL+ LTFA+ D+F + GHV FG+PDWARTH ++S
Sbjct: 30 DFGAFIHKLQLLPPPQPSPPKAPHPLTSLTFALSDLFHIHGHVPSFGHPDWARTHEPSSS 89
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
TAPAV A++ GGAT + T++D++A I GENKH+GTPTNP P RVPGGSSSG+AVAV
Sbjct: 90 TAPAVSALVEGGATCVATTVLDDLALGIGGENKHFGTPTNPAVPARVPGGSSSGAAVAVA 149
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A VDF+LG DT G VRVPA +CGI GFRPSH AVS G+IP++ S DTVGWFA DP IL
Sbjct: 150 ANFVDFALGIDTTGGVRVPAGFCGILGFRPSHGAVSHMGIIPISTSLDTVGWFAKDPNIL 209
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
RVG +LLQ A V P Q++ A+DC Q ++P DR +Q +VK+ EKLFG +++++
Sbjct: 210 RRVGHILLQ-APFVMQRSPRQIVIADDCFQHINVPLDRSSQVVVKATEKLFGRQVLKHIN 268
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQ-EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
LGDY+ +VPSL+ G K E SL L+ M+ LQR+EF+ H DW+ TVKPD
Sbjct: 269 LGDYLSSRVPSLKG--CSGQKPNGEVKASSLKLLAHIMQFLQRHEFRLKHDDWMNTVKPD 326
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
L PG+S ++ E S +I+ +SV++E+RAA+++LL D GILVIPTV PPPKL
Sbjct: 327 LHPGVSAQLHEKFEVSDAEIENSKSVRSEMRAAVNSLLKDEGILVIPTVADPPPKLGGKE 386
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
E +++RAFSLLSIA +SG CQVSIPLG +D PV++SL+A+HG D FLL+ ++T++
Sbjct: 387 ILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSVSLIARHGGDRFLLDTLQTVYT 446
Query: 422 TLKEE 426
TL+E+
Sbjct: 447 TLQEQ 451
>gi|225448253|ref|XP_002268888.1| PREDICTED: outer envelope protein 64, mitochondrial [Vitis
vinifera]
gi|296086830|emb|CBI32979.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/425 (51%), Positives = 289/425 (68%), Gaps = 12/425 (2%)
Query: 9 GAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
GAF+E+F L QP A +L LSG FA+ DIFDV G+VTGFG+ W RTH AT TA
Sbjct: 52 GAFVERFELLPFPQPPPPASRLLLSGFKFAVTDIFDVKGYVTGFGSTSWKRTHEEATKTA 111
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
AV A+L GAT +GKT++DE+++ I GEN +G+P NP P +PGGSSSGSAVAV ++
Sbjct: 112 VAVTALLKNGATCVGKTVLDELSFGITGENMDFGSPANPVLPSHIPGGSSSGSAVAVASQ 171
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
LVDF++GTDT G VRVPAS+CGI G+RPSH AVST GV+P +QS DTVGWFA DP IL+R
Sbjct: 172 LVDFAIGTDTIGGVRVPASFCGILGYRPSHGAVSTIGVLPSSQSLDTVGWFARDPSILHR 231
Query: 185 VGRVLLQLADDVNLVRPSQV---IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
VG +LLQ +N V P +V + A+D QLS +P + + K E L G ++V
Sbjct: 232 VGHILLQ----INPVEPRRVRNLMIADDLFQLSKVPKQKTVHVVNKVAENLSGYQPPKHV 287
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
G Y+ VPSL+ F E + + I +L ALSS M LQR EFK NH +WV +VKP
Sbjct: 288 NFGQYIASNVPSLKGF-HEQSINVKNGISALKALSSVMISLQRCEFKTNHEEWVKSVKPR 346
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
LGP +S+RV A+ T+ + I + V+TE+RAAL +LL D GILVIPTV PP KL
Sbjct: 347 LGPEVSDRVLAAINTTHENIKIFYKVRTEMRAALHSLLKDDGILVIPTVADPPLKLNSKK 406
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ F RAF+LLSIA +SG CQV++PLG H++ P+++S +A HG+D FLL+ V ++
Sbjct: 407 AVFSEFHDRAFTLLSIASMSGCCQVTVPLGKHEDFPISVSFIAFHGADKFLLDTVLDMYP 466
Query: 422 TLKEE 426
+L+E+
Sbjct: 467 SLQEQ 471
>gi|224135565|ref|XP_002322105.1| amidase family protein [Populus trichocarpa]
gi|222869101|gb|EEF06232.1| amidase family protein [Populus trichocarpa]
Length = 592
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/400 (53%), Positives = 293/400 (73%), Gaps = 2/400 (0%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+GLTFA+ D+FD++G+VTGFG+PDWA+TH AA+ T+ V ++ GGAT +GKT++DE+AY
Sbjct: 59 TGLTFAVSDLFDIEGYVTGFGHPDWAKTHEAASRTSVVVSTLVEGGATCVGKTVIDELAY 118
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
SI GENKHYGTPTNP P RVPGGSSSG+AVAV A LVDFSLG DT G VRVPA +CGI
Sbjct: 119 SITGENKHYGTPTNPVEPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCGII 178
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
GFRPS+ A+S GV+P++ S DTVGWFA DP IL RVG VLLQ A P Q+I A+
Sbjct: 179 GFRPSYGAISKIGVLPVSVSLDTVGWFAKDPNILRRVGHVLLQSAFG-GQRSPRQIIMAD 237
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
DC QL IP DR+ Q +VKS EK FG ++++ IL Y+ KVPSL+ F ++ E
Sbjct: 238 DCFQLLKIPVDRIAQVVVKSTEKHFGRQLLKHEILDVYLNSKVPSLKEFHNK-KTNGEVK 296
Query: 269 IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
S+ L++ M+LL RYEF++NH +W+ TVKP L P +S ++ E + S +I++C+S++
Sbjct: 297 TSSIRLLANVMQLLHRYEFRSNHEEWINTVKPILEPNLSAQMNEIMELSDAEIELCKSIR 356
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSI 388
E+R+A+++LL D GILV+PT PPKL E +++ +F LLSIA +SG CQV++
Sbjct: 357 EEMRSAINSLLKDDGILVVPTTAYLPPKLGGKEILSEEYQSSSFGLLSIASLSGCCQVTV 416
Query: 389 PLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQ 428
PLG ++ PV++SL+A+HGSD FLL+ V+T++ TL+E+ +
Sbjct: 417 PLGYYNKCPVSVSLIARHGSDRFLLDTVQTMYKTLQEQAE 456
>gi|449497473|ref|XP_004160411.1| PREDICTED: translocon at the outer membrane of chloroplasts 64-like
[Cucumis sativus]
Length = 591
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/429 (50%), Positives = 300/429 (69%), Gaps = 6/429 (1%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPL----SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+EKF L P +GLTFA+ D+F+++GHVTGFG+PDWA+TH AA+
Sbjct: 33 DFGAFIEKFQLLPPPQPAPPKAPHPLTGLTFAVSDVFEIEGHVTGFGHPDWAKTHDAASR 92
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+P V A++ GGAT IGKT+ +E++ I+GENK+Y TPTNP + +VPGGSSSG+AVAV
Sbjct: 93 TSPVVSALVEGGATCIGKTVTNELSMGISGENKYYETPTNPASHSKVPGGSSSGAAVAVA 152
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A LVDFSLG DT G VR+PAS+CGI GFRPSH +VS G++P++ S DTVG FA DP +L
Sbjct: 153 ANLVDFSLGIDTVGDVRIPASFCGILGFRPSHGSVSQVGIVPVSLSLDTVGMFAKDPNVL 212
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
RVG VLLQL V P Q+I A+DC QL IP DR+TQ + KS EKLFG +++
Sbjct: 213 RRVGHVLLQLPYAVQR-NPRQIIIADDCFQLLKIPVDRITQAVTKSTEKLFGRQALKHEN 271
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
LG Y+ KVP+L+ + + S S+ L++ M+ ++R EFK NHG+W+ +VKPDL
Sbjct: 272 LGSYLSSKVPNLKELIGKKTNGNLNS-ASIRVLANLMQTVERIEFKGNHGEWIDSVKPDL 330
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
+ E++ E + S I+ +SV+ E+R A+++LL D G+LVIPT PPPKL
Sbjct: 331 DSALMEQLNEKLEISDTMIEKFKSVRNEMRMAINSLLKDDGVLVIPTTVDPPPKLGGKEI 390
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
E ++ R FS LSIA +SG CQV++PLG HD+ PV++S LA+HG+D FLL++V+T++ +
Sbjct: 391 FSEEYQTRVFSSLSIASISGCCQVTLPLGFHDSCPVSVSFLARHGADRFLLDIVQTMYKS 450
Query: 423 LKEELQRMS 431
L+EE + S
Sbjct: 451 LQEEAEAAS 459
>gi|255569802|ref|XP_002525865.1| amidase, putative [Ricinus communis]
gi|223534870|gb|EEF36559.1| amidase, putative [Ricinus communis]
Length = 607
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/435 (49%), Positives = 281/435 (64%), Gaps = 6/435 (1%)
Query: 1 MASRDSDYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWART 56
M + D+GAF+EKF + Q A + PLSGL+FAIKDIFDV +VTGFGNPDW RT
Sbjct: 44 MMIKREDFGAFIEKFEILPFPQAPPPAAKQPLSGLSFAIKDIFDVKDYVTGFGNPDWRRT 103
Query: 57 HSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSG 116
H A A AV A+L GAT +GKTIMDE+ I+GEN HYGTP NP P VPGGSSSG
Sbjct: 104 HEVAEKMAVAVTALLKNGATCVGKTIMDELGLGISGENLHYGTPMNPIMPSFVPGGSSSG 163
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
SAV V A+LVDF+LGTDT G +R+PA++CGIFG+RPSH VS G IP AQS DTVGW A
Sbjct: 164 SAVTVAAELVDFALGTDTIGCIRIPAAFCGIFGYRPSHGTVSMIGAIPNAQSLDTVGWLA 223
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
DP IL VG LL+L + V + ++IFA+D QL +P + + K++E L G
Sbjct: 224 RDPSILRCVGHALLKL-NAVEARKARRIIFADDLFQLCKVPKQKTEYVISKAIENLSGYQ 282
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+++ G Y+ VPSL+ FL + Q +L ALSS M LQRYEFK NH +WV
Sbjct: 283 SPKHLNFGQYIASNVPSLKGFLEQSGNLQS-GTSALKALSSVMVSLQRYEFKTNHEEWVK 341
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
+VKP L P +S RV A+ + + + V +++E+RAA +LL D GILVIPTV PP K
Sbjct: 342 SVKPKLAPDVSNRVLAAINATYENVKVLYKIRSEMRAATQSLLKDDGILVIPTVADPPLK 401
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
L R L SIA +SG CQV++PLG HD+ P+++S ++ HG+D FLL+ +
Sbjct: 402 LNTKKGYSPESHDRVIILSSIASMSGCCQVAVPLGKHDDCPISVSFISFHGADKFLLDTI 461
Query: 417 ETLHNTLKEELQRMS 431
++ +L+ ++ +S
Sbjct: 462 VDMYLSLQAQISIVS 476
>gi|255579275|ref|XP_002530483.1| amidase, putative [Ricinus communis]
gi|223529980|gb|EEF31906.1| amidase, putative [Ricinus communis]
Length = 589
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/403 (51%), Positives = 289/403 (71%), Gaps = 2/403 (0%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+GLTFA+ D+FD++G+VTGFG+PDWARTH AA+ T+ V A++ GGAT IGKT++DE+AY
Sbjct: 59 TGLTFAVSDVFDIEGYVTGFGHPDWARTHEAASQTSLVVSALVEGGATCIGKTVVDELAY 118
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
SINGEN+HYGTPTNP P RVPGGSSSG+AVAV A LVDFSLG DT G VRVPA +CGI
Sbjct: 119 SINGENEHYGTPTNPAVPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCGII 178
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
GFRPS+ A+ G++P++ S DTVGWFA DP ++ RVG +LLQL V P Q+I A+
Sbjct: 179 GFRPSYGAIPNTGILPISASLDTVGWFARDPNVIRRVGHLLLQLPFGVQR-NPKQIIIAD 237
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
DC QL IP DR+ Q ++KS EK+FG ++ + IL D + +V SL+ L + E
Sbjct: 238 DCFQLLKIPVDRIAQVVIKSTEKIFGRQVLRHEILEDVLFSRVRSLK-LLHDQKTNGELR 296
Query: 269 IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
S+ L++ MRLL RYEF++NH +W+ KP++ IS ++ E V +I++ +S++
Sbjct: 297 TSSIRLLANIMRLLHRYEFRHNHEEWINIEKPNVDHNISAQIHEIVDIPDTEIEIFKSIR 356
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSI 388
E+RAA+++LL D GILVIPT PPKL E ++ FSLLSIA +SG CQV+I
Sbjct: 357 QEMRAAINSLLKDDGILVIPTTAHLPPKLGGKDMLSEDYQILLFSLLSIASLSGCCQVTI 416
Query: 389 PLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQRMS 431
PLGL++ PV++S +A+HG D FL++ V+ ++++L+E++ ++
Sbjct: 417 PLGLYEKCPVSVSFIARHGGDRFLMDTVQNMYSSLQEQVDMLA 459
>gi|449439139|ref|XP_004137345.1| PREDICTED: LOW QUALITY PROTEIN: translocon at the outer membrane of
chloroplasts 64-like [Cucumis sativus]
Length = 585
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/429 (50%), Positives = 295/429 (68%), Gaps = 12/429 (2%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPL----SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+EKF L P +GLTFA+ D+F+++GHVTGFG+PDWA+TH AA S
Sbjct: 33 DFGAFIEKFQLLPPPQPAPPKAPHPLTGLTFAVSDVFEIEGHVTGFGHPDWAKTHDAAXS 92
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
A++ GGAT IGKT+ +E++ I+GENKHY TPTNP + +VPGGSSSG+AVAV
Sbjct: 93 ------ALVEGGATCIGKTVTNELSMGISGENKHYETPTNPASHSKVPGGSSSGAAVAVA 146
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A LVDFSLG DT G VR+PAS+CGI GFRPSH +VS G++P++ S DTVG FA DP +L
Sbjct: 147 ANLVDFSLGIDTVGDVRIPASFCGILGFRPSHGSVSQVGIVPVSLSLDTVGMFAKDPNVL 206
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
RVG VLLQL V P Q+I A+DC QL IP DR+TQ + KS EKLFG +++
Sbjct: 207 RRVGHVLLQLPYAVQR-NPRQIIIADDCFQLLKIPVDRITQAVTKSTEKLFGRQALKHEN 265
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
LG Y+ KVP+L+ + + S S+ L++ M+ ++R EFK NHG+W+ +VKPDL
Sbjct: 266 LGSYLSSKVPNLKELIGKKTNGNLNS-ASIRVLANLMQTVERIEFKGNHGEWIDSVKPDL 324
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
+ E++ E + S I+ +SV+ E+R A+++LL D G+LVIPT PPKL
Sbjct: 325 DSALMEQLNEKLEISDTMIEKFKSVRNEMRMAINSLLKDDGVLVIPTTVDSPPKLGGKEI 384
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
E ++ R FS LSIA +SG CQV++PLG HD+ PV++S LA+HG+D FLL++V+T++ +
Sbjct: 385 FSEEYQTRVFSSLSIASISGCCQVTLPLGFHDSCPVSVSFLARHGADRFLLDIVQTMYRS 444
Query: 423 LKEELQRMS 431
L+EE + S
Sbjct: 445 LQEEAEAAS 453
>gi|356525874|ref|XP_003531546.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 598
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/422 (52%), Positives = 286/422 (67%), Gaps = 3/422 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQL-PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
D+GAF+E+ L P +Q LS LTFAIKDIFDV G+VTGFGNP W +TH A TA
Sbjct: 45 DFGAFVERIELLPIPQPNQTQTLSALTFAIKDIFDVKGYVTGFGNPQWKKTHGEAGKTAI 104
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
+ A+LS GAT +GKT+MDE ++ I+GENK YGTPTNP P +PGGSSSGSAVAV A+L
Sbjct: 105 VITALLSDGATCVGKTVMDEFSFGISGENKFYGTPTNPQMPSSIPGGSSSGSAVAVAARL 164
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
VDF++GTDT G VR+PA++CGI GFRPSH +ST GV+P AQS DTVGWFA DP +L+RV
Sbjct: 165 VDFAIGTDTTGCVRIPAAFCGILGFRPSHGVISTIGVLPNAQSLDTVGWFARDPSVLHRV 224
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
G VLL L V L R ++IFA+D QLS PS + + K++E L G ++++ L
Sbjct: 225 GLVLLPLT-SVELKRTRRIIFADDLFQLSKAPSQKTAYIIGKAIENLSGYQSLQHMNLCQ 283
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
Y+ VPSL+ F E +Q+ + L AL+S M LQ YEFK NH +WV +VKP LG G
Sbjct: 284 YIASNVPSLKGF-HEKLTQQQNGLSILKALTSVMFSLQGYEFKTNHEEWVKSVKPRLGRG 342
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
+SERV A+ + I V+TE+R A LL D GILVIPTV P KL +
Sbjct: 343 VSERVNAAMNATHDNIKTLYKVRTEMRGAFQHLLKDDGILVIPTVADYPLKLNTEKGFSS 402
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
F RAF+L SIA +SG CQV+IPLG H++ +ISL++ HG D FLLN V +++TL+E
Sbjct: 403 EFHDRAFALSSIASISGCCQVAIPLGCHNDCCASISLISAHGVDKFLLNTVLDMYSTLQE 462
Query: 426 EL 427
++
Sbjct: 463 QV 464
>gi|356512046|ref|XP_003524732.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 603
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/429 (50%), Positives = 280/429 (65%), Gaps = 7/429 (1%)
Query: 3 SRDSDYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHS 58
+ D+GAF+E+F L QP A + LS LTFAI D FDV +VTGFGN W TH
Sbjct: 43 THKQDFGAFVERFELLPFPQPPPPAAKQSLSALTFAINDTFDVKDYVTGFGNSTWKSTHK 102
Query: 59 AATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSA 118
AA TA V A+L GAT +GKT++DE ++ I+GENK+YGTPT+P P GGSS GSA
Sbjct: 103 AAEKTAVVVTALLMSGATCVGKTVVDEFSFGISGENKYYGTPTHPQMPSCKLGGSSCGSA 162
Query: 119 VAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWD 178
VAV A LVDF++GTDT G VR+PAS+CGIFGFRPSH AVST GV+P AQS DT+GWFA D
Sbjct: 163 VAVAAGLVDFAVGTDTTGCVRIPASFCGIFGFRPSHGAVSTIGVLPNAQSLDTIGWFARD 222
Query: 179 PKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII 238
P IL+RVG VLLQL + V R IFA+D QLS IP+ + K++E + G
Sbjct: 223 PSILHRVGHVLLQL-NSVETKRSRHFIFADDLFQLSKIPTQNTIYVIGKAIENMSGYQAP 281
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
+++ L Y+ +VPSL+ +++ E SI L LSS M LQ YEFK NH +WV ++
Sbjct: 282 KHLNLCQYIDSRVPSLRLHQQSTHQQNETSI--LKTLSSVMLSLQGYEFKTNHEEWVKSL 339
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
K LG G+S+ V A+ T+ I V+TE+R A +LL D GILVIPTV G KL
Sbjct: 340 KYKLGCGVSDHVIAAINTTYDNIKALYKVRTEMRGAFQSLLKDDGILVIPTVAGSQLKLN 399
Query: 359 MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVET 418
F R F+L SIA VSG CQV+IPLG HD+ +++S ++ HG+D FLL+ +
Sbjct: 400 TKKGFSSEFHDRTFALSSIASVSGCCQVTIPLGYHDDCSLSVSFISFHGADKFLLDTILD 459
Query: 419 LHNTLKEEL 427
+++TL+E++
Sbjct: 460 IYSTLQEQV 468
>gi|356524688|ref|XP_003530960.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 591
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/399 (53%), Positives = 290/399 (72%), Gaps = 4/399 (1%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+ LTFA+ D+FD++GHV+ FG+P+WARTH A+STAPAV A++ GGAT + T++D++A
Sbjct: 60 TALTFALSDLFDIEGHVSTFGHPEWARTHEPASSTAPAVSALVEGGATCVATTVLDDLAL 119
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
I GENKHYGTPTNP P RVPGGSSSG+AVAV A VDF+LG DT G VRVPA +CGI
Sbjct: 120 GIGGENKHYGTPTNPAVPARVPGGSSSGAAVAVAADFVDFALGIDTVGGVRVPAGFCGIL 179
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
GFRPSH AVS G+IP++ S DTVGWFA DP IL RVG +LLQ A P Q++ A+
Sbjct: 180 GFRPSHGAVSHLGIIPISTSLDTVGWFAKDPNILRRVGHILLQ-APFAMQRSPRQIVIAD 238
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ-EY 267
DC Q ++P DR +Q +VK+ EKLFG +++++ LGDY+ +VPSL+ G K E
Sbjct: 239 DCFQHINVPLDRSSQVVVKTTEKLFGRQVLKHINLGDYLSSRVPSLKG--CSGQKTNGEV 296
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+L L++ M+ LQR+EF+ H +W+ TVKP+L PG+S ++ E S +I+ +SV
Sbjct: 297 KASALKLLANIMQSLQRHEFRLKHDEWMNTVKPELHPGVSAQLHEKFEVSDAEIENSKSV 356
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
++E+ AA+++LL D GILVIPTV PPPKL E +++RAFSLLSIA +SG CQVS
Sbjct: 357 RSEMCAAVNSLLKDEGILVIPTVADPPPKLGGKEILSEDYQSRAFSLLSIASISGCCQVS 416
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
IPLG +D PV++SL+A+HG D FLL+ ++T++ TL+E+
Sbjct: 417 IPLGFYDKYPVSVSLIARHGGDRFLLDTLQTVYTTLQEQ 455
>gi|357521651|ref|XP_003631114.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|355525136|gb|AET05590.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
Length = 594
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/399 (51%), Positives = 288/399 (72%), Gaps = 4/399 (1%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+ LTFAI D+FD++GHV+ FG+P+WARTH A+ST+PAV ++ GAT I T++D ++Y
Sbjct: 64 TSLTFAISDLFDIEGHVSTFGHPEWARTHEPASSTSPAVSTLVQSGATCIATTVLDNLSY 123
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
I+GENKH+GTP+NP P RVPGGSSSG+AVAV A VDFSLG DT G VRVPA +CGI
Sbjct: 124 GISGENKHFGTPSNPAIPARVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGIL 183
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
GFRPSH AVS G+IP++ S DTVGWFA DP IL RVG +LLQ A V P Q+I A+
Sbjct: 184 GFRPSHGAVSHGGIIPVSTSLDTVGWFAKDPDILRRVGHILLQ-APFVMQRSPRQIIIAD 242
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ-EY 267
DC Q ++P DR +Q ++K+ EKLFG +++++ L Y++ KVPSL+ G K E
Sbjct: 243 DCFQHLNVPLDRSSQVVIKATEKLFGKQVLKHINLEGYIRSKVPSLK--ACSGQKANGEL 300
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
SL L++ M+ LQR+EF + H +W++ VKPDL P +S ++ E S +++ +SV
Sbjct: 301 KSSSLILLANIMQFLQRHEFGHMHDEWMSIVKPDLHPAVSAQLHEKFDVSEVEMENSKSV 360
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
++E+R A+++LL D GILVIPTV PPPKL + +++RAFSLLSIA +SG CQV+
Sbjct: 361 RSEMRVAVNSLLKDEGILVIPTVADPPPKLGGKEILSQDYQSRAFSLLSIASISGCCQVT 420
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
+PLG +D PV++SL+A++G D FLL+ ++T++ +L+E+
Sbjct: 421 VPLGFYDKYPVSVSLIARYGGDRFLLDTLKTMYTSLQEQ 459
>gi|224054324|ref|XP_002298203.1| amidase family protein [Populus trichocarpa]
gi|222845461|gb|EEE83008.1| amidase family protein [Populus trichocarpa]
Length = 599
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/434 (48%), Positives = 283/434 (65%), Gaps = 6/434 (1%)
Query: 2 ASRDSDYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTH 57
A D+GAF+++F + QP A + L+GLTFAI DIF+++ +VTGFGNPDWARTH
Sbjct: 37 AKFKEDFGAFVQRFQILPFPQPPPPAAKQTLAGLTFAINDIFELEDYVTGFGNPDWARTH 96
Query: 58 SAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGS 117
AA TA V A+L GA +GKT+M E+ + ++GEN HYGTP NP P VPGGSSSGS
Sbjct: 97 EAAEKTAVTVTALLKNGAVCVGKTVMGELGFGVSGENIHYGTPINPEMPAHVPGGSSSGS 156
Query: 118 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
AVAV A LVDF+LGTDT G +R+PA++CG+ +RPSH AVST G++P +QS DTVGW A
Sbjct: 157 AVAVAAGLVDFALGTDTIGCIRIPAAFCGLLSYRPSHGAVSTIGILPNSQSLDTVGWLAR 216
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI 237
DP IL RVG LL+L + V R ++IFA+D QLS +P + + K++E L G
Sbjct: 217 DPSILLRVGHTLLKL-NTVEPRRARRLIFADDLFQLSKVPKQKAEVVINKAIENLSGYQP 275
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT 297
+++ G ++ VPSL+ FL + Q I +L ALSSAM LQR+EFK NH DWV +
Sbjct: 276 QQHINFGQHISLNVPSLKGFLDQSTNMQN-GISNLKALSSAMVSLQRHEFKTNHEDWVKS 334
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
V+P L +S+ + A+ T+ + I ++ ELRA + LL D GILVIPTV PP KL
Sbjct: 335 VEPKLALDVSDNLLTAINTTHENIKALCDIRKELRACMQILLKDDGILVIPTVADPPSKL 394
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
RA L SIA +SG CQV+IPLG +D P+++S + HG D FLL+ V
Sbjct: 395 NSKKRDTVESHNRALILSSIASMSGCCQVTIPLGKNDGCPISVSFITFHGGDKFLLDTVL 454
Query: 418 TLHNTLKEELQRMS 431
++++LKE++ +S
Sbjct: 455 DMYSSLKEQINFLS 468
>gi|356557561|ref|XP_003547084.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 665
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/422 (52%), Positives = 285/422 (67%), Gaps = 3/422 (0%)
Query: 7 DYGAFMEKFVLQPSSSAHQL-PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
D+GAF+E+F L P +Q LS LTFAIKDIFDV G+VTGFGNP W + H+ A TA
Sbjct: 112 DFGAFVERFELLPIPQPNQTQTLSALTFAIKDIFDVKGYVTGFGNPQWKKMHNEAGKTAI 171
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
+ A+LS GAT +GKT+MDE ++ I+GENK YGTPTNP P +PGGSSSGSAVAV A+L
Sbjct: 172 VITALLSNGATCVGKTVMDEFSFGISGENKFYGTPTNPQMPSSIPGGSSSGSAVAVAARL 231
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
VDF++GTDT G VR+PA++CGI GFRPSH +ST GV+P AQS DTVGWFA DP +L+RV
Sbjct: 232 VDFAMGTDTTGCVRIPAAFCGILGFRPSHGVISTIGVLPNAQSLDTVGWFARDPSVLHRV 291
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
G VLL L + V L R ++IFA+D QL PS + + K++E L G +++ L
Sbjct: 292 GLVLLPL-NSVELKRTRRIIFADDLFQLCKAPSQKTVYIIGKAIENLSGYQFPQHMNLCQ 350
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
Y+ VPSL+ F E Q+ + L AL+S M LQ YEFK NH +WV +VKP LG G
Sbjct: 351 YIASNVPSLKEF-REKFTHQQNGVSILKALTSVMFYLQGYEFKTNHEEWVKSVKPRLGRG 409
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
+SERV A+ + I V+TE+ A LL D GILVIPTV P KL +
Sbjct: 410 MSERVNAAMNATHDNIKTLYKVRTEMWGAFQHLLKDDGILVIPTVADYPLKLNTEKGFSS 469
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
F RAF+L SIA +SG CQV+IPLG H++ ++SL++ HG+D FLLN V +++TL+E
Sbjct: 470 EFGDRAFALSSIASISGCCQVAIPLGCHNDCCASVSLISAHGADKFLLNTVLDMYSTLQE 529
Query: 426 EL 427
++
Sbjct: 530 QV 531
>gi|30682691|ref|NP_196504.2| translocon at the outer membrane of chloroplasts 64-V [Arabidopsis
thaliana]
gi|357580466|sp|F4KCL7.1|OE64M_ARATH RecName: Full=Outer envelope protein 64, mitochondrial; AltName:
Full=Mitochondrial outer membrane protein 64;
Short=mtOM64; AltName: Full=Translocon at the outer
membrane of chloroplasts 64-V; Short=AtTOC64-V
gi|332004008|gb|AED91391.1| translocon at the outer membrane of chloroplasts 64-V [Arabidopsis
thaliana]
Length = 603
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 278/430 (64%), Gaps = 7/430 (1%)
Query: 2 ASRDSDYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTH 57
A R+ D+GAF+++F L P A + LSGLTF+I D FDV ++TGFG P W +TH
Sbjct: 41 ALREEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTH 100
Query: 58 SAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGS 117
AA TA V +L GAT +GKTIMDE+ + I GENKHYGTP NP PD VPGG SSGS
Sbjct: 101 EAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGS 160
Query: 118 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
AV+VGA+LVDFSLG DT G VRVPA++CGI GFRPS VS+ GV+P +QS +TVGWFA
Sbjct: 161 AVSVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFAS 220
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI 237
DP +L +VG LL L+ V R +IFA+D +LS IP + Q + K++E L G
Sbjct: 221 DPSVLCQVGHALLNLS-AVTHRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSGYKT 279
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT 297
++V +G YV VPSL F + K Q S +L ALSS M +QR+EFK NH +W T
Sbjct: 280 PKHVNVGQYVASNVPSLAEFCEQSGKSQN-SASTLRALSSVMLAIQRHEFKTNHEEWWQT 338
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
K LGP S V A+++ + I VK E+RA + +LL + GILVIPTV PPP+L
Sbjct: 339 CKSFLGPRFSNDVVTALKSKNESIKSLYRVKNEMRATIQSLLKEDGILVIPTVADPPPRL 398
Query: 358 QMDPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+ +L F R ++L IA +SG CQV+IPLG H + P+++SLL +G D FLL+
Sbjct: 399 NTKRNKSLNEFLDRTYALSCIASMSGCCQVTIPLGEHGDRPISVSLLTYYGGDKFLLDTT 458
Query: 417 ETLHNTLKEE 426
++ +L+++
Sbjct: 459 LDVYASLQDQ 468
>gi|9955529|emb|CAC05468.1| putative subunit of TOC complex [Arabidopsis thaliana]
Length = 616
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 278/430 (64%), Gaps = 7/430 (1%)
Query: 2 ASRDSDYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTH 57
A R+ D+GAF+++F L P A + LSGLTF+I D FDV ++TGFG P W +TH
Sbjct: 41 ALREEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTH 100
Query: 58 SAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGS 117
AA TA V +L GAT +GKTIMDE+ + I GENKHYGTP NP PD VPGG SSGS
Sbjct: 101 EAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGS 160
Query: 118 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
AV+VGA+LVDFSLG DT G VRVPA++CGI GFRPS VS+ GV+P +QS +TVGWFA
Sbjct: 161 AVSVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFAS 220
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI 237
DP +L +VG LL L+ V R +IFA+D +LS IP + Q + K++E L G
Sbjct: 221 DPSVLCQVGHALLNLS-AVTHRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSGYKT 279
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT 297
++V +G YV VPSL F + K Q S +L ALSS M +QR+EFK NH +W T
Sbjct: 280 PKHVNVGQYVASNVPSLAEFCEQSGKSQN-SASTLRALSSVMLAIQRHEFKTNHEEWWQT 338
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
K LGP S V A+++ + I VK E+RA + +LL + GILVIPTV PPP+L
Sbjct: 339 CKSFLGPRFSNDVVTALKSKNESIKSLYRVKNEMRATIQSLLKEDGILVIPTVADPPPRL 398
Query: 358 QMDPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+ +L F R ++L IA +SG CQV+IPLG H + P+++SLL +G D FLL+
Sbjct: 399 NTKRNKSLNEFLDRTYALSCIASMSGCCQVTIPLGEHGDRPISVSLLTYYGGDKFLLDTT 458
Query: 417 ETLHNTLKEE 426
++ +L+++
Sbjct: 459 LDVYASLQDQ 468
>gi|297806973|ref|XP_002871370.1| hypothetical protein ARALYDRAFT_325494 [Arabidopsis lyrata subsp.
lyrata]
gi|297317207|gb|EFH47629.1| hypothetical protein ARALYDRAFT_325494 [Arabidopsis lyrata subsp.
lyrata]
Length = 621
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/430 (48%), Positives = 279/430 (64%), Gaps = 7/430 (1%)
Query: 2 ASRDSDYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTH 57
A R+ D+GAF+++F L P A + LS LTF+I D FDV ++TGFG+P W +TH
Sbjct: 41 ALREEDFGAFLDRFELLPFPPPPPPAAKQSLSALTFSISDAFDVKDYITGFGSPQWKKTH 100
Query: 58 SAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGS 117
AA TA V +L GAT +GKTIMDE+ + I GENKHYGTP NP P VPGG SSGS
Sbjct: 101 EAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGENKHYGTPINPLMPSNVPGGCSSGS 160
Query: 118 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
AV+VGA+LVDFSLG DT G VR+PA++CGI GFRPS VS+ GV+P +QS +TVGWFA
Sbjct: 161 AVSVGAELVDFSLGIDTTGGVRIPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFAS 220
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI 237
DP +L +VG LL L+ V R +IFA+D +LS IP + + K++E L G
Sbjct: 221 DPSVLCQVGHALLNLS-AVAHRRQRSLIFADDLFELSDIPKQKSVHVVRKAIENLSGYQT 279
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT 297
++V +G YV VPSL F + K Q S +L ALSS M +QR+EFK NH +W T
Sbjct: 280 PKHVNVGQYVASNVPSLAEFCEQSGKSQN-SASTLKALSSVMLAIQRHEFKTNHEEWSQT 338
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
K LGP S V A+++ + I VKTE+RA + +LL + GILVIPTV PPPKL
Sbjct: 339 CKSFLGPRFSNDVVTALKSRNESIKSLYRVKTEMRATIQSLLKEDGILVIPTVADPPPKL 398
Query: 358 QM-DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+ ++L F R ++L SIA +SG CQV+IPLG H + P+++S L +G D FLL+ +
Sbjct: 399 NTKNKNSLNEFLDRTYALSSIASMSGCCQVTIPLGQHGDRPISVSFLTYYGGDKFLLDTI 458
Query: 417 ETLHNTLKEE 426
++ +L+++
Sbjct: 459 LDVYASLQDQ 468
>gi|115454865|ref|NP_001051033.1| Os03g0707900 [Oryza sativa Japonica Group]
gi|13937285|gb|AAK50116.1|AC087797_1 chloroplast protein-translocon-like protein [Oryza sativa Japonica
Group]
gi|108710681|gb|ABF98476.1| chloroplast outer membrane translocon subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|108710682|gb|ABF98477.1| chloroplast outer membrane translocon subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|113549504|dbj|BAF12947.1| Os03g0707900 [Oryza sativa Japonica Group]
gi|218193613|gb|EEC76040.1| hypothetical protein OsI_13214 [Oryza sativa Indica Group]
Length = 586
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/429 (48%), Positives = 291/429 (67%), Gaps = 11/429 (2%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D GAF+ + L QP + PL+GL FAI D F V G++T FG+ +WA+TH AAT
Sbjct: 34 DNGAFIARLELLPPPQPPPPQARHPLTGLCFAIADAFHVTGYITSFGSLEWAKTHDAATQ 93
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+ V +++ GGA +GKT++DEMA+SI+GENKH+GTPTNP APDRVPGG SSGSAVAV
Sbjct: 94 TSLVVSSLVDGGAMCVGKTVIDEMAFSIHGENKHFGTPTNPAAPDRVPGGCSSGSAVAVA 153
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A +VDFSLG DT G VRVP SYCG+ FRPSH+ V GVIP+A S D +GWFA DP +L
Sbjct: 154 AGIVDFSLGIDTIGGVRVPGSYCGVLAFRPSHAVVPNNGVIPVAPSLDAIGWFARDPSVL 213
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
RVG +LL+L ++ +P A+DC ++S + + R+TQ + KSVEKLFG ++ +V
Sbjct: 214 RRVGHLLLRLP-YADIRQPRHFYIADDCFEMSKVHARRLTQVVTKSVEKLFGRQVLGHVN 272
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
L +Y+ ++PSL++ S G+ + ++S SL ALS AM+ L ++EFK+ H +W+ +VKP +
Sbjct: 273 LENYLASRIPSLRNN-SNGHGDSKFS--SLLALSRAMQFLHKHEFKDQHMEWINSVKPAV 329
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
I V I+ Q + E+RAAL ALL D GILVIPTV G PPKL
Sbjct: 330 DACI---VGNLSDDGESTINNSQDARKEVRAALGALLKDDGILVIPTVLGCPPKLNAREL 386
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+ + + + L S+A +SG CQV++PLG HD PV++SL+A+HG D FLL+ ++T++ T
Sbjct: 387 SSQDYNVQTSCLTSLASMSGCCQVTVPLGTHDKCPVSVSLIARHGGDRFLLDTIQTIYAT 446
Query: 423 LKEELQRMS 431
++E++ ++
Sbjct: 447 IQEQVDALA 455
>gi|326531444|dbj|BAJ97726.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 588
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/427 (46%), Positives = 285/427 (66%), Gaps = 11/427 (2%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+ + L QP + PL+ L FAI D F V G++T FG+ +WA+TH AT
Sbjct: 34 DHGAFVSRLELLPPPQPPPPQARHPLTDLCFAIADAFHVSGYITSFGSLEWAKTHDEATQ 93
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+ V ++ GGA +GKT++DEMAYSI+GENKH+GTPTNP A DRVPGG SSGSAVAV
Sbjct: 94 TSLVVSTLVDGGAICVGKTVIDEMAYSIHGENKHFGTPTNPAASDRVPGGCSSGSAVAVA 153
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
+VDF+LG D+ G VRVP YCG+ FRPSH+ +S +GVIP+A S DT+GWFA DP +L
Sbjct: 154 GGMVDFALGIDSIGGVRVPGGYCGVLAFRPSHAVISNSGVIPVAPSLDTIGWFARDPIVL 213
Query: 183 NRVGRVLLQLA-DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
RVG +LL+L+ D+ L P A+DC ++S IP+ R+TQ + KSVEKL+G ++ +V
Sbjct: 214 RRVGHLLLKLSYTDIRL--PRHFYIADDCFEISKIPARRLTQVVTKSVEKLYGRQVLSHV 271
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
LG+Y+ K+PSL+++ S G K + SL ALSSAM+LL ++EF++ H +W+ + K
Sbjct: 272 NLGNYLASKIPSLRNY-SNGQKNGDSKFSSLQALSSAMQLLHKHEFRDQHNEWINSAKSS 330
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
+ I V I++ Q V+ E+R AL+ LL D GILVIPT G PPK+
Sbjct: 331 VDASI---VGNLSDDGDSTINIIQDVRKEVRLALNTLLKDDGILVIPTALGCPPKINARE 387
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ + A L S++ +SG CQV++P+G HD P+++S +A+HG D FLL+ + ++
Sbjct: 388 LSSTSYNAETLYLQSLSSMSGCCQVTVPIGTHDKCPISVSFIARHGGDRFLLDTTQAIYA 447
Query: 422 TLKEELQ 428
T++E+++
Sbjct: 448 TIQEQVE 454
>gi|222625649|gb|EEE59781.1| hypothetical protein OsJ_12287 [Oryza sativa Japonica Group]
Length = 586
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 281/405 (69%), Gaps = 7/405 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL FAI D F V G++T FG+ +WA+TH AAT T+ V +++ GGA +GKT++DEM
Sbjct: 58 PLTGLCFAIADAFHVTGYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAMCVGKTVIDEM 117
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+SI+GENKH+GTPTNP APDRVPGG SSGSAVAV A +VDFSLG DT G VRVP SYCG
Sbjct: 118 AFSIHGENKHFGTPTNPAAPDRVPGGCSSGSAVAVAAGIVDFSLGIDTIGGVRVPGSYCG 177
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ FRPSH+ V GVIP+A S D +GWFA DP +L RVG +LL+L ++ +P
Sbjct: 178 VLAFRPSHAVVPNNGVIPVAPSLDAIGWFARDPSVLRRVGHLLLRLP-YADIRQPRHFYI 236
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A+DC ++S + + R+TQ + KSVEKLFG ++ +V L +Y+ ++PSL++ S G+ + +
Sbjct: 237 ADDCFEMSKVHARRLTQVVTKSVEKLFGRQVLGHVNLENYLASRIPSLRNN-SNGHGDSK 295
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+S SL ALS AM+ L ++EFK+ H +W+ +VKP + I V I+ Q
Sbjct: 296 FS--SLLALSRAMQFLHKHEFKDQHMEWINSVKPAVDACI---VGNLSDDGESTINNSQD 350
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+ E+RAAL ALL D GILVIPTV G PPKL + + + + L S+A +SG CQV
Sbjct: 351 ARKEVRAALGALLKDDGILVIPTVLGCPPKLNARELSSQDYNVQTSCLTSLASMSGCCQV 410
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQRMS 431
++PLG HD PV++SL+A+HG D FLL+ ++T++ T++E++ ++
Sbjct: 411 TVPLGTHDKCPVSVSLIARHGGDRFLLDTIQTIYATIQEQVDALA 455
>gi|449438199|ref|XP_004136877.1| PREDICTED: outer envelope protein 64, mitochondrial-like [Cucumis
sativus]
Length = 606
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/425 (48%), Positives = 275/425 (64%), Gaps = 6/425 (1%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+++F L QPS A + L+GLTFA+KD+FDV +VTGFGNPDW RTH A
Sbjct: 48 DFGAFIQRFELRPFPQPSPPAARQSLAGLTFAVKDVFDVKDYVTGFGNPDWKRTHDVAEK 107
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T V +L GA +GKT+MDE+ + I GENK YGTP NP VPGGSSSGSAVAV
Sbjct: 108 TDEMVTLLLKNGAACVGKTVMDELGFGITGENKQYGTPINPKLSSFVPGGSSSGSAVAVA 167
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
+LVDF+LGTDT G +R+PAS+CGIF FRPSH + V+ + S DTVGWFA DP L
Sbjct: 168 GELVDFALGTDTVGCIRIPASFCGIFAFRPSHGVIPMNRVLSNSPSLDTVGWFARDPSTL 227
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
+RVG VLL+L + V R +++ A+D QLS +P + + K++E L G +++
Sbjct: 228 HRVGHVLLKL-NSVEPRRMRRLVIADDLFQLSKVPLQKTVHVVEKAIENLSGYQSPKHMN 286
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
G+Y+ VPSL+ F ++ Q+ I L ALSS M LLQR EFK NH +W+ +VKP L
Sbjct: 287 FGEYLASNVPSLKGFHNQSPTLQK-GITILKALSSVMILLQRSEFKINHEEWIKSVKPKL 345
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
G SE V A++TS I V+ E R AL +LL D GILVIPTV PPPK
Sbjct: 346 GSNASEDVLAAIKTSYDDIKTLYKVRMETRIALKSLLKDDGILVIPTVADPPPKFSTKKG 405
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
FR R F+L SI+ +SG C+V++PLG D+ P++ISL+ HG+D FLL+ V + +
Sbjct: 406 IASEFRDRTFALSSISSMSGCCEVAVPLGKQDDCPISISLITFHGADKFLLDTVLDIFSA 465
Query: 423 LKEEL 427
L+E++
Sbjct: 466 LQEQV 470
>gi|242033249|ref|XP_002464019.1| hypothetical protein SORBIDRAFT_01g010650 [Sorghum bicolor]
gi|241917873|gb|EER91017.1| hypothetical protein SORBIDRAFT_01g010650 [Sorghum bicolor]
Length = 588
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/426 (48%), Positives = 282/426 (66%), Gaps = 10/426 (2%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+ + L QP PL+GL FAI D V G++T FG+ +WA+TH A
Sbjct: 35 DHGAFIARLELLPPPQPPPPQAPHPLTGLCFAIADALHVSGYITSFGSLEWAKTHDAEVQ 94
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+P V A++ GA +GKT++DEMAYSI+GENK++ TPTNP PDRVPGG SSGSAVAV
Sbjct: 95 TSPVVSALVDSGAICVGKTVIDEMAYSIHGENKYFDTPTNPATPDRVPGGCSSGSAVAVA 154
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
+VDF+LG D+ G VRVP +YCG+ FRPSH+ VS++GVIP+A S DT+GWFA DP +L
Sbjct: 155 GGMVDFALGIDSIGGVRVPGAYCGVLAFRPSHAVVSSSGVIPVAPSLDTIGWFARDPSVL 214
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
+RVG +LL+L + +P A+DC LS IP R+TQ + KSVEKLFG + +V
Sbjct: 215 HRVGHLLLRLP-YAGIRQPRNFYIADDCFGLSKIPVRRLTQVVTKSVEKLFGRQ-VRHVN 272
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
L +Y+ ++ L ++ S G+K + P L AL +AMR L + EFK+ H +W+ +VKP +
Sbjct: 273 LENYLSSRISGLSNY-SNGHKNGDSKFPLLLALCNAMRSLHKREFKDQHMEWINSVKPAV 331
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
I + E ID CQ + E R+ALS LL D GILVIPT G PPKL
Sbjct: 332 DARIVSDLSE---DGDSDIDGCQDARKEARSALSELLKDDGILVIPTALGCPPKLNAKEL 388
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+ E + ++ LLS+A +SG CQVSIPLG HD P+++SL+A+HG D FLL+ +T++ T
Sbjct: 389 SSESYNSQTLGLLSLASMSGCCQVSIPLGTHDKCPISVSLIARHGGDRFLLDTTQTMYTT 448
Query: 423 LKEELQ 428
++E+++
Sbjct: 449 IQEQVE 454
>gi|226493135|ref|NP_001152345.1| LOC100285985 [Zea mays]
gi|195655363|gb|ACG47149.1| toc64 [Zea mays]
Length = 588
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/426 (47%), Positives = 287/426 (67%), Gaps = 10/426 (2%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+ + L QP PL+GL FAI D V G++T FG+ +WA+TH+A
Sbjct: 35 DHGAFVARLELLPPPQPPPPQAPHPLTGLCFAIADALHVSGYITSFGSLEWAKTHNAEVL 94
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+ V A++ GGA +GKT++DEMAYSI+GEN+++ TPTNP APDRVPGG SSGSAVAV
Sbjct: 95 TSSVVSALVDGGAICVGKTVIDEMAYSIHGENRYFDTPTNPAAPDRVPGGCSSGSAVAVA 154
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
+VDF+LG D+ G VR+P +YCG+ FRPSH+ VS +GVIP+A S DT+GWFA DP +L
Sbjct: 155 GGMVDFALGIDSIGGVRIPGAYCGVLAFRPSHAVVSNSGVIPVAPSLDTIGWFAKDPSVL 214
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
+RVG +LL+L + +P A+DC +LS IP+ R+TQ + KSVEKLFG + +V
Sbjct: 215 HRVGHLLLRLP-YAGIRQPRIFYIADDCFELSKIPARRLTQVVTKSVEKLFGRQ-VRHVN 272
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
L +Y+ ++ SL ++ S G+K + P L AL ++M L + EFK+ H +W+ +VKP +
Sbjct: 273 LENYLSSRISSLGNY-SNGHKNGDSKFPLLLALCNSMISLHKQEFKDKHMEWINSVKPAV 331
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
I + E ID CQ+V+ E R+ALS LL D GILVIPT G PPKL
Sbjct: 332 DARIVSDLSE---DGDSDIDGCQNVRKEARSALSGLLKDDGILVIPTALGCPPKLNAKEL 388
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+ E + ++ LLS+A +SG CQVSIPLG HD P+++SL+A+HG D FLL+ +T++ T
Sbjct: 389 SSESYNSQTLRLLSLASMSGCCQVSIPLGTHDKCPISVSLIARHGGDRFLLDTTQTMYTT 448
Query: 423 LKEELQ 428
++E+++
Sbjct: 449 IQEQVE 454
>gi|30684733|ref|NP_188424.2| translocon at the outer membrane of chloroplasts 64-III
[Arabidopsis thaliana]
gi|75335547|sp|Q9LVH5.1|OE64C_ARATH RecName: Full=Outer envelope protein 64, chloroplastic; AltName:
Full=Translocon at the outer membrane of chloroplasts
64-III
gi|9294499|dbj|BAB02718.1| unnamed protein product [Arabidopsis thaliana]
gi|332642509|gb|AEE76030.1| translocon at the outer membrane of chloroplasts 64-III
[Arabidopsis thaliana]
Length = 589
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 277/399 (69%), Gaps = 6/399 (1%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+GLTFA+ D+FD+ G+VTGFG+PDW RTH AA+ST+P V ++ GGAT +GKT++DE A+
Sbjct: 59 TGLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAF 118
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
SI+GENKHY +PTNP AP R+PGG+ SG+AVAV VDF+LG DT G VRVPA YCG+
Sbjct: 119 SISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVL 178
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL--ADDVNLVRPSQVIF 206
GF+ S+ A+S G+IP++ S D+VGWFA DP L RVG VLLQL A N P Q+I
Sbjct: 179 GFKSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRN---PRQIIL 235
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A+DC QL IP DR+TQ + KS EKLFG ++++ L Y + KVPSL+ F +
Sbjct: 236 ADDCFQLLKIPVDRITQVVTKSAEKLFGRQLLKHQNLETYFETKVPSLKEF-ARTKAIAN 294
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ + L++ M+LLQR+EF NHGDW+ TVKP + P I +V E + ++ + +
Sbjct: 295 TKVSTSRLLANVMQLLQRHEFLQNHGDWINTVKPAIDPVILSQVCENPELTNEETENLNA 354
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
++ E R A+ +LL D GILVIPT+P PPKL E ++ RA SLLSIA +SG CQV
Sbjct: 355 IRNETRVAIGSLLKDDGILVIPTLPAVPPKLGSKEITSEDYQNRASSLLSIASISGCCQV 414
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
++PLG H+ P+++S + +HG D FLL+ V+T++ +L+E
Sbjct: 415 TVPLGHHEKCPISVSFIGRHGGDRFLLDTVQTMYPSLQE 453
>gi|75336680|sp|Q9MUK5.1|TOC64_PEA RecName: Full=Translocon at the outer membrane of chloroplasts 64
gi|7453538|gb|AAF62870.1|AF179282_1 Toc64 [Pisum sativum]
Length = 593
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/399 (52%), Positives = 287/399 (71%), Gaps = 4/399 (1%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
S L FAI DIFD++GHV+ FG+P+WARTH A+STA AV A++ GAT IG T++DE+AY
Sbjct: 62 SSLNFAISDIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAY 121
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
I+GENKH+GTPTNP P+RVPGGSSSG+AVAV A VDFSLG DT G VRVPA +CGI
Sbjct: 122 GISGENKHFGTPTNPAVPNRVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGIL 181
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
GFRPSH AVS G+IP++ S DTVGWFA DP +L RVG +LLQ A V P Q+I A+
Sbjct: 182 GFRPSHGAVSHVGIIPVSTSLDTVGWFAKDPDVLRRVGHILLQ-APFVMQRNPRQIIIAD 240
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF-LSEGNKEQEY 267
DC Q ++P DR +Q ++K+ EKLFG +++++ DY+ KV SL+ + + N +
Sbjct: 241 DCFQHLNVPLDRTSQVVIKATEKLFGKQVLKHINFEDYISSKVSSLKACSIQKSNGVLKS 300
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
S SL L++ M+ LQR+EF++ H +W++ VKPDL P +S ++ E S +I+ +SV
Sbjct: 301 S--SLKLLANVMQSLQRHEFEHTHSEWMSIVKPDLHPAVSAQLHEKFEVSELEIENSKSV 358
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
++ELR A+++LL D G+LVIPTV PPPKL +++RA SLLSIA +SG CQV+
Sbjct: 359 RSELRVAVNSLLKDEGVLVIPTVADPPPKLGGKEFLSHDYQSRALSLLSIASISGCCQVT 418
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
+PLG D PV++SL+A+HG D FLL+ ++T++ L+E+
Sbjct: 419 VPLGFFDKNPVSVSLIARHGGDRFLLDTLKTMYTVLQEQ 457
>gi|357138060|ref|XP_003570616.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Brachypodium distachyon]
Length = 609
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/427 (48%), Positives = 271/427 (63%), Gaps = 8/427 (1%)
Query: 6 SDYGAFMEKFVLQPSSSA-----HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
+D GAF E+ L P QL LSGLTFA D F+++G+V GFGNPDW RTH AA
Sbjct: 51 ADSGAFCERLELAPPPQPPPPAARQL-LSGLTFAASDNFEIEGYVAGFGNPDWKRTHKAA 109
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
+ TA AV +L GAT +G+T+MDE+ + + GEN H GTP NP +P VPGGS SGSAVA
Sbjct: 110 SRTAVAVTMLLKQGATCVGRTVMDELGFGVTGENLHCGTPINPVSPTVVPGGSCSGSAVA 169
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK 180
V A+LVDF+LGTDT G +R+PAS+CG+ FRPSH VST G I +QS DT+GWFA DP+
Sbjct: 170 VSAQLVDFALGTDTTGDLRIPASFCGLLCFRPSHGVVSTLGTIANSQSLDTIGWFARDPR 229
Query: 181 ILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIEN 240
+L+RVG VLL A L Q++FA+DC +L +P + + +V L G ++
Sbjct: 230 VLHRVGDVLLPAASG-GLKEKKQLVFADDCFELLKVPKQKTMHIIENAVHTLPGYQPPKH 288
Query: 241 VILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKP 300
+ +G Y+ VPSL+ F K Q I +L AL + M LLQRYEFK NH DWV TVKP
Sbjct: 289 INIGQYISSNVPSLKEFCQHATKLQG-GISALKALCAVMLLLQRYEFKANHEDWVNTVKP 347
Query: 301 DLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
LG IS RV +AV + I V+ E RAAL LL D GILV+PT+ G P K
Sbjct: 348 KLGLDISTRVLQAVNFTDDNIKSLYIVRNEWRAALKNLLKDTGILVLPTMAGYPLKRNSR 407
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
F R ++ + IA +SG CQ ++PLG H + P+++S +A HGSD FLL + ++
Sbjct: 408 KRLSPEFEDRMYAFVCIAALSGCCQATVPLGNHSDHPISLSFVAPHGSDKFLLRAILDMY 467
Query: 421 NTLKEEL 427
+T++E+L
Sbjct: 468 STIQEQL 474
>gi|357117973|ref|XP_003560735.1| PREDICTED: uncharacterized protein LOC100846161 [Brachypodium
distachyon]
Length = 588
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/427 (46%), Positives = 287/427 (67%), Gaps = 11/427 (2%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D GAF+ + L QP + PL+ L FA+ D F + ++T FG+ +WA+TH AAT
Sbjct: 34 DSGAFISRLELLPPPQPPPPQARHPLTDLCFAVADAFHISSYITSFGSLEWAKTHDAATQ 93
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+ V +++ GGA +GKT++DEMAYSI+GENKH+GTP NP A DRVPGG SSGSAVAV
Sbjct: 94 TSLVVSSLVDGGAICVGKTVIDEMAYSIHGENKHFGTPRNPAASDRVPGGCSSGSAVAVA 153
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A +VDF+LG D+ G VRVP YCG+ FRPSH+ + +GVIP+A S DT+GWFA DP +L
Sbjct: 154 AGMVDFALGIDSVGGVRVPGGYCGVLAFRPSHAVIPNSGVIPVAPSLDTIGWFARDPIVL 213
Query: 183 NRVGRVLLQLA-DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
RVG +LL+L+ ++ L P A+DC +LS IP+ R+TQ + KS EKL+G ++ +V
Sbjct: 214 RRVGHLLLRLSYTEIRL--PRNFYIADDCFELSKIPARRLTQVVTKSAEKLYGRQVLSHV 271
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
LG+Y+ ++PSL+++ S G K + SL ALSSAM+LL ++EF++ H +W+ +VK
Sbjct: 272 NLGNYLASRMPSLRNY-SNGQKNGDSKSCSLLALSSAMQLLHKHEFRDQHNEWINSVKSA 330
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
+ I V A ID+CQ V+ E R+AL+ALL D GILVIPT G PPK+
Sbjct: 331 VDACI---VGNLSDNGASTIDLCQDVRKEARSALNALLKDDGILVIPTALGCPPKVNSRE 387
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ + A L S++ +SG CQV+IP+G HD P+++S +A+HG D FLL+ + ++
Sbjct: 388 LSSASYNAETLCLSSLSSMSGCCQVTIPVGTHDKCPISVSFIARHGGDRFLLDTTQAMYG 447
Query: 422 TLKEELQ 428
T++E+++
Sbjct: 448 TIQEQVE 454
>gi|326497425|dbj|BAK05802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 263/401 (65%), Gaps = 3/401 (0%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L L FA+ D FD++GHV GFGNPDW RTH AA+ TA AV +L GAT +G+T+MDE+
Sbjct: 76 LLDLAFAVSDNFDIEGHVAGFGNPDWKRTHKAASHTAVAVKVLLKQGATCVGRTVMDELG 135
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ + GEN H GTP NP +P +PGGS SG+AVAV A+LV+F+LGTDT G +R+PAS+CG+
Sbjct: 136 FGVTGENLHCGTPINPASPSVLPGGSCSGAAVAVSAQLVEFALGTDTTGDLRIPASFCGV 195
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GFR SH VST G +P + S DT+GW A DP IL+RVG LL +A L Q++FA
Sbjct: 196 LGFRSSHGVVSTLGTLPNSHSLDTIGWLARDPHILSRVGDALLPVA-ACGLKGKRQLVFA 254
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHI-IENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+DC +L IP+ + + +V L GG+ +++ +G Y+ VPSL+ F K QE
Sbjct: 255 DDCFELLKIPNQKTVDVIENAVHTLPGGYQPPKHINIGQYISSNVPSLKEFCEPSTKLQE 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+L AL + M LLQRYEFK+NH DWV TVKP LG +S RV +AV + I
Sbjct: 315 -GKSALKALCTVMLLLQRYEFKSNHEDWVNTVKPKLGLEVSTRVLQAVNFTDDNIKSLYI 373
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+TE RAAL LL D GILV+PT+ G P K F + ++ +SIA +SG CQ
Sbjct: 374 VRTEWRAALKNLLKDTGILVLPTMAGHPLKRNSKQRLSSEFEDKMYAFVSIAALSGCCQA 433
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
++PLG H++ P++IS +A HGSD FLL + +++T++E++
Sbjct: 434 TVPLGNHNDHPISISFVAAHGSDKFLLRAILDMYSTIQEQI 474
>gi|218191602|gb|EEC74029.1| hypothetical protein OsI_08982 [Oryza sativa Indica Group]
Length = 613
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/426 (47%), Positives = 269/426 (63%), Gaps = 8/426 (1%)
Query: 7 DYGAFMEKFVLQPSSSA-----HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
D+GAF +F + P+ QL LSGLTFA D F+++G+V GFGNPDW RTH AAT
Sbjct: 54 DFGAFCYRFEIAPAPQPPPPAARQL-LSGLTFAASDNFEIEGYVAGFGNPDWKRTHKAAT 112
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
TA V + G T +G T+MDE+ + ++G N H GTP NP +P PGGS SGSAVAV
Sbjct: 113 RTAVPVTMLQKQGGTYVGSTVMDELGFGVSGGNLHNGTPINPASPSLFPGGSCSGSAVAV 172
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
A+LVDF+LGTDT G VR+PA +CG+ F+ SH VST G I +QS DT+GWFA DP +
Sbjct: 173 SAQLVDFALGTDTTGDVRIPACFCGVLCFKSSHGVVSTLGTIANSQSLDTIGWFARDPSV 232
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
L+RVG VLL A L + Q+ FA+DC QL +P+++ + +++ L G +++
Sbjct: 233 LHRVGDVLLPAATG-GLTQTRQLFFADDCFQLLKVPNEKTVNVIENAIQTLPGYQPPKHI 291
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
+G+Y+ VPSL+ F E E + +L ALS+ M LLQRYEFK NH DWV TVKP
Sbjct: 292 NIGEYISSHVPSLKDF-CEPTVEMLEGMSALKALSTVMLLLQRYEFKTNHEDWVNTVKPK 350
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
LGP S RV +AV + + I V+ ELRAAL LL D GILV+PT G P K
Sbjct: 351 LGPDTSTRVLQAVNSKSDNIKSLYIVRNELRAALKTLLKDTGILVLPTTAGYPLKRNARQ 410
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
F R + + IA +SG CQ IPLG H++ P+++SLLA HGSD FLL V + +
Sbjct: 411 RLSPGFEDRMSAFVGIATLSGCCQAVIPLGSHNDDPISLSLLAAHGSDKFLLRNVLYMFS 470
Query: 422 TLKEEL 427
++KE++
Sbjct: 471 SIKEQV 476
>gi|115448751|ref|NP_001048155.1| Os02g0754500 [Oryza sativa Japonica Group]
gi|46805946|dbj|BAD17240.1| putative Toc64 [Oryza sativa Japonica Group]
gi|113537686|dbj|BAF10069.1| Os02g0754500 [Oryza sativa Japonica Group]
gi|215697708|dbj|BAG91702.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623695|gb|EEE57827.1| hypothetical protein OsJ_08425 [Oryza sativa Japonica Group]
Length = 613
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/426 (47%), Positives = 268/426 (62%), Gaps = 8/426 (1%)
Query: 7 DYGAFMEKFVLQPSSSA-----HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
D+GAF +F + P+ QL LSGLTFA D F+++G+V GFGNPDW RTH AAT
Sbjct: 54 DFGAFCYRFEIAPAPQPPPPAARQL-LSGLTFAASDNFEIEGYVAGFGNPDWKRTHKAAT 112
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
TA V + G T +G T+MDE+ + ++G N H GTP NP +P PGGS SGSAVAV
Sbjct: 113 RTAVPVTMLQKQGGTYVGSTVMDELGFGVSGGNLHNGTPINPASPSLFPGGSCSGSAVAV 172
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
A+LVDF+LGTDT G VR+PA +CG+ F+ SH VST G I +QS DT+GWFA DP +
Sbjct: 173 SAQLVDFALGTDTTGDVRIPACFCGVLCFKSSHGVVSTLGTIANSQSLDTIGWFARDPSV 232
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
L+RVG VLL A L + Q+ FA+DC QL +P+++ + +++ L G +++
Sbjct: 233 LHRVGDVLLPAATG-GLTQTRQLFFADDCFQLLKVPNEKTVNVIENAIQTLPGYQPPKHI 291
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
+G+Y+ VPSL+ F E E + +L ALS+ M LLQRYEFK NH DWV TVKP
Sbjct: 292 NIGEYISSHVPSLKDF-CEPTVEMLEGMSALKALSTVMLLLQRYEFKTNHEDWVNTVKPK 350
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
LG S RV +AV + + I V+ ELRAAL LL D GILV+PT G P K
Sbjct: 351 LGLDTSTRVLQAVNSKSDNIKSLYIVRNELRAALKNLLKDTGILVLPTTAGYPLKRNARQ 410
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
F R + + IA +SG CQ IPLG H++ P+++SLLA HGSD FLL V + +
Sbjct: 411 RLSPGFEDRMSAFVGIATLSGCCQAVIPLGSHNDHPISLSLLAAHGSDKFLLRNVLYMFS 470
Query: 422 TLKEEL 427
++KE++
Sbjct: 471 SIKEQV 476
>gi|226491410|ref|NP_001148185.1| LOC100281793 [Zea mays]
gi|195609838|gb|ACG26749.1| amidase [Zea mays]
gi|195614940|gb|ACG29300.1| amidase [Zea mays]
gi|195616542|gb|ACG30101.1| amidase [Zea mays]
Length = 587
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/423 (46%), Positives = 266/423 (62%), Gaps = 8/423 (1%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLP----LSGLTFAIKDIFDVDGHVTGFGNPDWART 56
M+ +D G+F ++F L P + LSGLTFA D F+++G+V GFGNPDW +T
Sbjct: 50 MSGTPADAGSFCDRFELHPPAQPPPPAARHILSGLTFAASDNFEIEGYVAGFGNPDWKKT 109
Query: 57 HSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSG 116
H A TA AV + GAT +G+TIMDE+ + + GEN H+GTP NP + VPGGS SG
Sbjct: 110 HETARHTAVAVTMLRKQGATCVGRTIMDELGFGVTGENLHHGTPANPVSSSLVPGGSCSG 169
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
SAVAV A+LVDF++GTDT G VR+PAS+CG+ FRPS+ +ST G I +QS DT+GWFA
Sbjct: 170 SAVAVAAQLVDFAIGTDTIGDVRIPASFCGLLCFRPSYGVISTLGTIANSQSLDTIGWFA 229
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
DP IL+RVG VLL A L + Q +FA+DC QL + + + + +V+ L G
Sbjct: 230 RDPCILHRVGEVLLPAAVG-GLKQTRQFVFADDCFQLLKVSNQKTVHAIKNAVQALHGYQ 288
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+++ +G Y+ VPSL+ F K +E +L A+S+ M LLQRYEFK NH +WV
Sbjct: 289 PPKHINIGQYIYSNVPSLKEFCEPATKLEE-GTSALKAISTVMLLLQRYEFKANHEEWVN 347
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
TVKP LG IS RV +AV + + I +++ ELRAAL LL D GILV+PT G P K
Sbjct: 348 TVKPKLGLDISTRVLQAVNFARENIKSLYAIRNELRAALKNLLKDTGILVLPTTAGYPLK 407
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL-NL 415
F R + + +A +SG C+V+IP+ D+ V++S +A HGSD FLL N+
Sbjct: 408 RNSKERLSSGFEDRMYKFVGVAALSGCCEVTIPMENLDH-HVSLSFVAAHGSDKFLLRNI 466
Query: 416 VET 418
++T
Sbjct: 467 LDT 469
>gi|413938943|gb|AFW73494.1| hypothetical protein ZEAMMB73_808672 [Zea mays]
Length = 614
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 193/423 (45%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLP----LSGLTFAIKDIFDVDGHVTGFGNPDWART 56
M+ D G+F ++F L P + LSGLTFA D F+++G+V GFGNPDW +T
Sbjct: 50 MSGTAPDAGSFCDRFELHPPAQPPPPAARHILSGLTFAASDNFEIEGYVAGFGNPDWKKT 109
Query: 57 HSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSG 116
H A TA AV + GAT +G+TIMDE+ + + GEN H+GTP NP + VPGGS SG
Sbjct: 110 HETARHTAVAVTMLRKQGATCVGRTIMDELGFGVTGENLHHGTPANPVSSSLVPGGSCSG 169
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
SAVAV A+L+DF++GTDT G VR+PAS+CG+ FRPS+ +ST G I +QS DT+GWFA
Sbjct: 170 SAVAVAAQLIDFAIGTDTIGDVRIPASFCGLLCFRPSYGVISTLGTIANSQSLDTIGWFA 229
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
DP IL+RVG VLL A L + Q +FA+DC QL + + + + +V+ L G
Sbjct: 230 RDPCILHRVGEVLLPAAVG-GLKQTRQFVFADDCFQLLKVSNQKTVHAIKNAVQALRGYQ 288
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+++ +G Y+ VPSL+ F K +E +L A+S+ M LLQRYEFK NH +WV
Sbjct: 289 PPKHINIGQYIYSNVPSLKEFCEPATKLEE-GTSALKAISTVMLLLQRYEFKANHEEWVN 347
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
TVKP LG IS RV +AV + + I +++ ELR AL LL D GILV+PT G P K
Sbjct: 348 TVKPKLGLDISTRVLQAVNFARENIKSLYAIRNELRVALKNLLKDTGILVLPTTAGYPLK 407
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL-NL 415
F R + + +A +SG C+V+IP+ D+ V++S +A HGSD FLL N+
Sbjct: 408 RNSKERLSSGFEDRMYKFVGVAALSGCCEVTIPMENLDH-HVSLSFVAAHGSDKFLLRNI 466
Query: 416 VET 418
++T
Sbjct: 467 LDT 469
>gi|413938944|gb|AFW73495.1| amidase [Zea mays]
Length = 587
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/423 (45%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLP----LSGLTFAIKDIFDVDGHVTGFGNPDWART 56
M+ D G+F ++F L P + LSGLTFA D F+++G+V GFGNPDW +T
Sbjct: 50 MSGTAPDAGSFCDRFELHPPAQPPPPAARHILSGLTFAASDNFEIEGYVAGFGNPDWKKT 109
Query: 57 HSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSG 116
H A TA AV + GAT +G+TIMDE+ + + GEN H+GTP NP + VPGGS SG
Sbjct: 110 HETARHTAVAVTMLRKQGATCVGRTIMDELGFGVTGENLHHGTPANPVSSSLVPGGSCSG 169
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
SAVAV A+L+DF++GTDT G VR+PAS+CG+ FRPS+ +ST G I +QS DT+GWFA
Sbjct: 170 SAVAVAAQLIDFAIGTDTIGDVRIPASFCGLLCFRPSYGVISTLGTIANSQSLDTIGWFA 229
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
DP IL+RVG VLL A L + Q +FA+DC QL + + + + +V+ L G
Sbjct: 230 RDPCILHRVGEVLLPAAVG-GLKQTRQFVFADDCFQLLKVSNQKTVHAIKNAVQALRGYQ 288
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+++ +G Y+ VPSL+ F K +E +L A+S+ M LLQRYEFK NH +WV
Sbjct: 289 PPKHINIGQYIYSNVPSLKEFCEPATKLEE-GTSALKAISTVMLLLQRYEFKANHEEWVN 347
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
TVKP LG IS RV +AV + + I +++ ELR AL LL D GILV+PT G P K
Sbjct: 348 TVKPKLGLDISTRVLQAVNFARENIKSLYAIRNELRVALKNLLKDTGILVLPTTAGYPLK 407
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL-NL 415
F R + + +A +SG C+V+IP+ D+ V++S +A HGSD FLL N+
Sbjct: 408 RNSKERLSSGFEDRMYKFVGVAALSGCCEVTIPMENLDH-HVSLSFVAAHGSDKFLLRNI 466
Query: 416 VET 418
++T
Sbjct: 467 LDT 469
>gi|38344119|emb|CAE01726.2| OSJNBb0050O03.16 [Oryza sativa Japonica Group]
Length = 345
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 194/336 (57%), Positives = 237/336 (70%), Gaps = 4/336 (1%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLS--GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D+GAFME+FVL P L GLTFAIKDIFD+ G VTGFGNPDWARTH+ A +T+
Sbjct: 4 DFGAFMERFVLPPPPPPSSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATS 63
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P VLA L+ GATS+G TIMDEMAYSI GEN HYGTP NPCAP RVPGGSSSGSAVAV A
Sbjct: 64 PVVLAALAAGATSLGTTIMDEMAYSIYGENAHYGTPANPCAPGRVPGGSSSGSAVAVAAN 123
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
LVDFSLGTDTGGSVRVPA+YCGIFG R SH VS VIPMAQ FDTVGWFA D L+R
Sbjct: 124 LVDFSLGTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVIPMAQMFDTVGWFARDLSTLSR 183
Query: 185 VGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
V +VLL L DD + P+ V DC Q+ P D Q + SV K FG H I+N LG
Sbjct: 184 VTKVLLPLPDD-TVKHPTHVTIPMDCFQILGSPDDHTYQIVNASVAKKFGSHAIDNANLG 242
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGP 304
D+V D VPS+ F+++ ++ + S+P+L+ +S M L R +FK NH +WV +VKP+LGP
Sbjct: 243 DFVSDNVPSIGKFIADFSESELPSVPALSVISHVMFSLLRSQFKANHAEWVNSVKPNLGP 302
Query: 305 GISERVWEAVRT-SAQKIDVCQSVKTELRAALSALL 339
G+ E + AV + + ++ +V+ E ++AL+ALL
Sbjct: 303 GLRENIHGAVASGDDEPLEEFLAVRAEFKSALAALL 338
>gi|2342685|gb|AAB70409.1| Contains similarity to Rhodococcus amidase (gb|D16207). ESTs
gb|T20504,gb|H36650,gb|N97423,gb|H36595 come from this
gene [Arabidopsis thaliana]
Length = 273
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 208/285 (72%), Gaps = 28/285 (9%)
Query: 5 DSDYGAFMEKF-VLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
++D+GAF+EK + S+S+ L GLTFAIKDIFDV+G VTGFGNPDW RTHSAATST
Sbjct: 4 NNDFGAFIEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATST 63
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
AP V ++L GAT++G TIMDEMAYSINGEN HYGTP NP A DRVPGGSSSGSAVAV A
Sbjct: 64 APVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAA 123
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
+LVDFS+GTDTGGSVRVPASYCGIFGFRPSH AVST G+ PMAQSFDTVGWFA D L
Sbjct: 124 RLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATLK 183
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
RVG VLLQ +N + PSQ+I A+DC +L S+P D + Q L
Sbjct: 184 RVGCVLLQ-QHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPL------------------ 224
Query: 244 GDYVKDKVPSLQHFLSEGN--KEQEYSIPSLAALSSAMRLLQRYE 286
VPSL+HF++ + +QE+ IPSL ALSS+MRLLQRY
Sbjct: 225 ------NVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRYN 263
>gi|384249168|gb|EIE22650.1| amidase [Coccomyxa subellipsoidea C-169]
Length = 405
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 232/405 (57%), Gaps = 21/405 (5%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+ A + PL GLTFA KD++DV+ +VTGFGNP W TH AT+TAPAV A+LS GA+ +GK
Sbjct: 17 TGAAEGPLQGLTFAAKDLYDVENYVTGFGNPTWKETHEPATATAPAVQALLSAGASLVGK 76
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T MDE+AYS+NGEN HYGTP NP PDR+PGGSSSGS VAV + VD +LG+DTGGSVRV
Sbjct: 77 THMDELAYSLNGENFHYGTPVNPACPDRIPGGSSSGSVVAVANESVDIALGSDTGGSVRV 136
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA--DDVNL 198
PASYCG +G RP+H VS G +A S+DT G+FA + ++L R G VLL A DV
Sbjct: 137 PASYCGAWGIRPTHGRVSLEGACTLAASYDTGGFFARNAELLRRAGDVLLDPATRSDVQF 196
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
R + A+D L +D T E +F +I+ V L Y + +P
Sbjct: 197 KR---WLVAKDAFDL----ADDATS------EAIFRVGLIDLVFLDSYHRFSLPVACTTK 243
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
+ E R+ Q E G+WV + +P LGPG ER A + +
Sbjct: 244 TASCSE------GFELACCVFRVSQGAEVWEALGEWVQSAQPQLGPGTKERFEMASQLTT 297
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+++ ++ + L LLG+ G+L +P+ PGP P L L+ FR R SL IA
Sbjct: 298 EEVARANELRARITQHLEQLLGEDGVLAVPSAPGPAPFLNTPQQDLDTFRKRLISLTCIA 357
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G+SG QVS+P+ + PV + L+ GSD LL L E L L
Sbjct: 358 GLSGLPQVSLPVAKVEGCPVGLGLIGPRGSDEALLRLTEQLEPVL 402
>gi|317127613|ref|YP_004093895.1| amidase [Bacillus cellulosilyticus DSM 2522]
gi|315472561|gb|ADU29164.1| Amidase [Bacillus cellulosilyticus DSM 2522]
Length = 390
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/411 (40%), Positives = 236/411 (57%), Gaps = 31/411 (7%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
+Y AF+ + ++ ++S L TFA+KD+FD+ G GNPDW ++H A S AP
Sbjct: 2 NYNAFISEMEVKRTTSGK---LVDKTFAVKDVFDIKGIPASAGNPDWLKSHEPANSNAPV 58
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V +L+ GA +G TI DE+ YS+NGEN HYGTP NP RVPGGSSSGSAVAV A +V
Sbjct: 59 VEQLLAEGAALLGTTITDELMYSLNGENMHYGTPVNPVEHTRVPGGSSSGSAVAVAANMV 118
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DFSLGTDTGGS+R+PA+YCG FGFRP+H +V G IP+A SFDTVGW DP +L+ VG
Sbjct: 119 DFSLGTDTGGSIRIPAAYCGNFGFRPTHGSVRIDGAIPLASSFDTVGWMTKDPALLHLVG 178
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
+V+++ + N V EDC +L V++G+V +++ H +E+ +
Sbjct: 179 QVIVKGDEHRNQAF-DHVFLGEDCWEL-------VSKGMVHALKPYV--HYVESELTA-- 226
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ GN +E L S+ R LQ E HG+W+ V+P+ P I
Sbjct: 227 ------------TTGNVAKE----GLMEWSNVFRTLQGLEIWKTHGEWIEKVQPEFAPDI 270
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
R A + + ++ E+ A+ LLGDH IL+IPT P PKL + + LE
Sbjct: 271 RARFQWASALDPSLKEPNERMREEITEAMQQLLGDHTILLIPTTPDIAPKLHLSENELED 330
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
R + L IAG++ QV++PLG D +P ++S++A G D LL V+
Sbjct: 331 RRTKTMQLTCIAGLAKLPQVTLPLGHTDGIPTSLSVVAGQGMDLPLLKWVK 381
>gi|242065922|ref|XP_002454250.1| hypothetical protein SORBIDRAFT_04g027530 [Sorghum bicolor]
gi|241934081|gb|EES07226.1| hypothetical protein SORBIDRAFT_04g027530 [Sorghum bicolor]
Length = 572
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/431 (40%), Positives = 240/431 (55%), Gaps = 49/431 (11%)
Query: 1 MASRDSDYGAFMEKFVLQPSSS----AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWART 56
M+ D G+F ++F L P A + LSGLTFA D F+V+G+V GFGNPDW T
Sbjct: 50 MSGTPPDAGSFCDRFELHPPPQPPPPAARHLLSGLTFAASDNFEVEGYVAGFGNPDWKNT 109
Query: 57 HSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSG 116
H AA TA AV + GAT +G+TIMDE+ + + GEN H+GTP NP +P VPGGS SG
Sbjct: 110 HEAARHTAVAVTMLRKQGATCVGRTIMDELGFGVTGENLHHGTPANPVSPSLVPGGSCSG 169
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
SAVAV A+LVDF+ +GWFA
Sbjct: 170 SAVAVAAQLVDFA------------------------------------------IGWFA 187
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
DP IL+RVG VLL A L + Q++FA+DC QL + + + + +V+ L G
Sbjct: 188 RDPCILHRVGEVLLPTAAG-GLKQTRQIVFADDCFQLLKVSNQKTVHAIKNAVQALRGYQ 246
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+++ +G Y+ VPSL+ F K QE +L A+S+ M LLQRYEFK NH +WV
Sbjct: 247 PPKHINIGQYICSNVPSLKEFCEPATKLQE-GTSALKAISTVMLLLQRYEFKANHEEWVN 305
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
TVKP LG IS RV +AV + + I +V+ ELRAAL LL D GILV+PT G P K
Sbjct: 306 TVKPKLGLDISTRVLQAVNFAHENIKSLYAVRNELRAALKNLLKDTGILVLPTTAGYPLK 365
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
F R + + IA +SG C+V+IP+ D+ V++S +A HG D FLL+ V
Sbjct: 366 RNSKERLSSGFEDRMYKFVGIAALSGCCEVTIPMENLDH-HVSLSFVAAHGLDKFLLHTV 424
Query: 417 ETLHNTLKEEL 427
++ +++++
Sbjct: 425 LDTYSLIQDQV 435
>gi|402300179|ref|ZP_10819713.1| amidase [Bacillus alcalophilus ATCC 27647]
gi|401724661|gb|EJS98002.1| amidase [Bacillus alcalophilus ATCC 27647]
Length = 396
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 243/403 (60%), Gaps = 30/403 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG +FA+KD+FDV G VTG GNPDW +TH AT+ A V +++ GA +G T DE+
Sbjct: 24 LSGASFAVKDVFDVKGVVTGAGNPDWEQTHLPATTHAKVVEQLINQGAKLVGTTHTDELM 83
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S+NGEN HYGTP NP AP+R+PGGSSSGSAV V A+LVDF++GTDTGGSVR+P+SYCG+
Sbjct: 84 FSLNGENVHYGTPVNPKAPERIPGGSSSGSAVVVAAELVDFAIGTDTGGSVRIPSSYCGV 143
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG RP+H AVS GVIP+A+ +DTVGW A P++L VG LL ++ N S+VI
Sbjct: 144 FGIRPTHGAVSMNGVIPLARYYDTVGWMARTPELLYEVGTHLLDQVENTNPF--SKVIIP 201
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+D L L +++ VE+ +++ DY+ L+EGN
Sbjct: 202 QDVLALV---DEKLKDPFANIVEQF-----QQSINQVDYIT---------LAEGN----- 239
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
L + R LQ + +HG+W+ V P+ G I+ER A + ++ + +
Sbjct: 240 ----LQNWLTTFRTLQGFGVWESHGNWIEKVNPNFGSDIAERFKWASTVTEEEAEEARLK 295
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ ++R + LLG+ ++++PT PG P LQ + LEV R + + I+G++GF +V+
Sbjct: 296 REKIRQHVLELLGEDNVILMPTAPGVAPLLQTEGEGLEVQRNKTLQMTCISGLTGFPEVT 355
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQRM 430
+PL + PV +S++A G D LLN V+ +N ++ Q++
Sbjct: 356 LPLLNINGTPVGLSIIAGPGQDLRLLNWVK--NNITQQSEQKI 396
>gi|297582895|ref|YP_003698675.1| amidase [Bacillus selenitireducens MLS10]
gi|297141352|gb|ADH98109.1| Amidase [Bacillus selenitireducens MLS10]
Length = 391
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 228/416 (54%), Gaps = 36/416 (8%)
Query: 8 YGAFM-EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
YGAF+ E ++P L TFA+KD+F ++GH GNP W ++H+ A +TAPA
Sbjct: 6 YGAFIDESLTVEPQKGG---ILHRKTFAVKDVFHIEGHRNTAGNPHWLQSHAPAKATAPA 62
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
++ +L GAT G T+ DEM YS++GEN HYGTP NP +PGGSSSGSAVA GA L
Sbjct: 63 LVHLLQAGATLKGTTVTDEMMYSLHGENVHYGTPVNPFDKSLIPGGSSSGSAVATGAGLR 122
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DF++GTDTGGSVR+PASYCG+FGFRPSH VS GVIP+A SFDTVGWF + +L VG
Sbjct: 123 DFAIGTDTGGSVRIPASYCGLFGFRPSHGKVSLEGVIPLADSFDTVGWFTRNAALLEDVG 182
Query: 187 RVLL--QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
VL+ + D + R + A D L + V+S H
Sbjct: 183 EVLIGDSMPDAPDFKR---AVIARDAFSLLTDTQHNALMSAVRSCSSKVKSH-------- 231
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGP 304
+EQ + L R++Q YE NHG+WV +PD GP
Sbjct: 232 ------------------EEQRITNDDLGDWVDIFRVIQGYEIWLNHGEWVKAHEPDFGP 273
Query: 305 GISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
GI ER A + + + + ++ A + ++ +++IPT+ G PP + + P +
Sbjct: 274 GIRERFHMAEQIKEADVAEARRRQLMIQDATADIMQPDTLMIIPTIAGEPPAVGLPPEEV 333
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNL-PVAISLLAKHGSDGFLLNLVETL 419
+ R R L +IAG++G QV+IP+ L P+AIS+LA G D LL+ V +L
Sbjct: 334 DKIRQRTMKLTAIAGLNGLPQVTIPVKRGGGLPPLAISILAPKGRDRDLLSFVTSL 389
>gi|168042567|ref|XP_001773759.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674874|gb|EDQ61376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 402
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 231/396 (58%), Gaps = 11/396 (2%)
Query: 39 FDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYG 98
FDV+ +TGFG+ DW +TH+ AT TA A+ +L GA GK MDE S+ G NK G
Sbjct: 4 FDVESAITGFGSQDWEQTHAPATQTAVAIGRILQSGAACTGKQTMDEFGLSMFGRNKRDG 63
Query: 99 TPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVS 158
NP P GG++SGS VAV + DF+L DT G VR PAS+CGIFG+R SH A+S
Sbjct: 64 IAENPVVPKYFAGGAASGSGVAVASNTCDFALALDTIGGVRNPASFCGIFGYRASHEAIS 123
Query: 159 TAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPS 218
T GV P++ S D VG + D +L++V ++LLQ D+ PS V+ A+DC SSI +
Sbjct: 124 TVGVTPVSPSLDAVGVLSRDVHVLHQVVKLLLQ-QPDLERGLPSSVLVADDCFSQSSIST 182
Query: 219 DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN---KEQEYSIPSLAAL 275
R + ++V + G ++ +V LG + VP+L++FL E K+ + L
Sbjct: 183 VRTADLIARAVSETLGRSLVHHVNLGALIASSVPTLRNFLMEEERLLKQDTSRYTTFDGL 242
Query: 276 SSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID----VCQSVKTEL 331
AM L+ RY+F++ H W V P+L + RV A+ A ID + +K E
Sbjct: 243 RDAMLLILRYKFRDKHRKWFKDVDPELSSDVDVRVKFAM---APYIDGLHKMALKIKEET 299
Query: 332 RAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLG 391
RAA++ +L +LV+P+ P PP + LE+F +RA S+LS+A +SG CQV++PLG
Sbjct: 300 RAAMNEILLMDSLLVMPSTPSLPPLKEAKGKELEIFESRALSMLSLASMSGCCQVTVPLG 359
Query: 392 LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
+P+++S+LA+HG D FLL + L+ ++ E+
Sbjct: 360 SARGIPISVSVLARHGGDMFLLESLMELNARIQMEV 395
>gi|168031234|ref|XP_001768126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680564|gb|EDQ66999.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 236/393 (60%), Gaps = 5/393 (1%)
Query: 39 FDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYG 98
+DV+ VTGFG+ DW +TH+ AT TA A+ +V+ GA S GK MD+ S+ G N G
Sbjct: 4 YDVESVVTGFGSYDWEQTHAPATQTAVAIDSVIKAGAVSTGKQTMDDFGLSMFGRNWRDG 63
Query: 99 TPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVS 158
NP AP GG++SGS VAV + VDF+L D+ G VR+PA++CGIFG+R SH +S
Sbjct: 64 PAENPVAPKHFSGGAASGSGVAVASNAVDFALAIDSIGGVRIPAAFCGIFGYRASHGVIS 123
Query: 159 TAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPS 218
TAGV +A S D VG F+ DP +L++V +VLL+ ++ P++V+ A+DC LS+I S
Sbjct: 124 TAGVTAVAPSLDVVGVFSRDPYVLHQVVKVLLK-QPELEWGSPAEVLIADDCFGLSTISS 182
Query: 219 DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK--EQEYS-IPSLAAL 275
R L ++V G +I +V LG ++ VP+L++FL E + +Q+ S + L
Sbjct: 183 VRTADLLARAVSDTIGRSLIHHVNLGTHIASNVPTLRNFLMEEERLLQQDTSRYSTYDGL 242
Query: 276 SSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID-VCQSVKTELRAA 334
AM L+ R EFK H W V P+L P + RV A+ + + VK E RAA
Sbjct: 243 RDAMILILREEFKEKHRKWFEDVNPELAPDVDVRVKFAMAPHLDGLHRLALKVKDETRAA 302
Query: 335 LSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD 394
++ LL +LVIP+ P PP LE F +RA S+LSIA +SG CQV++P+G
Sbjct: 303 MNELLLTDTLLVIPSTPSLPPSKAARGKELEFFESRALSILSIASMSGCCQVTVPIGDVR 362
Query: 395 NLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
+P+++SL+A+ G D FLL+ + L+ L+ E+
Sbjct: 363 GIPISVSLMARCGGDLFLLDSLIKLNPKLQLEV 395
>gi|452991628|emb|CCQ97050.1| Amidase 1 [Clostridium ultunense Esp]
Length = 401
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 227/412 (55%), Gaps = 31/412 (7%)
Query: 6 SDYGAFM-EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+D+ AF+ E +++P L GLTFA+KD+F + G+ G GNPDW RTH A A
Sbjct: 3 ADWNAFVQEDVIIEPYKDGR---LRGLTFAVKDVFAIKGYTNGAGNPDWLRTHKPAEKNA 59
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V +L+ GA G T DE+ +S+NGEN HYGTP NP AP +PGGSSSGSAVAV +
Sbjct: 60 VVVDLLLAQGARLKGITHTDELMFSLNGENYHYGTPINPKAPGCIPGGSSSGSAVAVASG 119
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
VDF+LGTDTGGSVR+P++YCGI+GFRP+H +V GVIP+AQSFDTVGW A D K L R
Sbjct: 120 SVDFALGTDTGGSVRIPSAYCGIYGFRPTHGSVPLDGVIPLAQSFDTVGWMARDAKTLLR 179
Query: 185 VGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
VG L +D Q++F D ++ V + KS K
Sbjct: 180 VGEALFDGMEDTE-GEFQQILFGRDAWEM-------VEEDCRKSFFK------------- 218
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGP 304
+P + ++E N+ + L L R +Q YE +NHG W+ P GP
Sbjct: 219 -----SIPLFER-MTEKNEWITVAPQGLPELFKTFRTIQGYEIWSNHGKWIRDENPRFGP 272
Query: 305 GISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
I+ER S + + + ++ + R+ + LLG + +LVIPT PPK + +
Sbjct: 273 DIAERFAWTSTLSDSEYEKARPLQEQFRSYMHELLGSNRLLVIPTSSCTPPKRGLTGDQV 332
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
E R R L IAG+S QV++P+ + LP IS++A + D LL+ V
Sbjct: 333 EDRRTRTLQLTCIAGLSELPQVTLPMEDEEGLPFGISIIAGYRQDLKLLSWV 384
>gi|295703180|ref|YP_003596255.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
DSM 319]
gi|294800839|gb|ADF37905.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
DSM 319]
Length = 399
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 222/412 (53%), Gaps = 34/412 (8%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
+ AF++ + P + L + L+FA+KD+FDV GH++ GNPDW TH A+ A V
Sbjct: 5 WNAFIDSDLYVPPTGTGML--NNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVV 62
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
A+L GA G T DE+ Y +NGEN HYGTP NP + DR+PGGSSSGSAVAV A + D
Sbjct: 63 AALLKEGAALKGVTHTDELMYGLNGENAHYGTPVNPKSADRIPGGSSSGSAVAVAAGITD 122
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F++GTDTGGSVR+P+SYCGIFG+RPSH +ST G+IP+A SFDTVG A D L +VG
Sbjct: 123 FAIGTDTGGSVRIPSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGA 182
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
VLL V+ +++ D ++L S R
Sbjct: 183 VLLNSTSRVSGF--TRLYVPTDVMELVDEQSMRAL------------------------- 215
Query: 248 KDKVPSLQHFLSEGNKEQEYSIP--SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
PS+ H + + +E +I + RLLQ E HG+W+ P G
Sbjct: 216 ---APSINHVMESFSTIEEIAIAPQGFSTYMETFRLLQGKEIWQTHGEWIQKENPMFGED 272
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
I R A + ++ + + ELR + + LG+ GIL++PT PGP P LE
Sbjct: 273 IGSRFQWASTLTLLNMNYIEEKRRELRYFMYSQLGEEGILILPTAPGPAPVKDAKGPELE 332
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
R R + IAG+SG QV+IP G D LPV +S +A + D LLN V+
Sbjct: 333 NRRLRTLQMTFIAGLSGLPQVTIPAGELDGLPVGLSFIAGYNQDEKLLNWVK 384
>gi|294497803|ref|YP_003561503.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
QM B1551]
gi|294347740|gb|ADE68069.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
QM B1551]
Length = 399
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/412 (39%), Positives = 221/412 (53%), Gaps = 34/412 (8%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
+ AF++ + P + L + L+FA+KD+FDV GH++ GNPDW TH A+ A V
Sbjct: 5 WNAFVDSDLYVPPTGTGML--NNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVV 62
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
A+L GA G T DE+ Y +NGEN HYGTP NP + DR+PGGSSSGSAVAV A + D
Sbjct: 63 AALLKEGAVLKGVTHTDELMYGLNGENAHYGTPINPKSADRIPGGSSSGSAVAVAAGITD 122
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F++GTDTGGSVR+P+SYCGIFG+RPSH +ST G+IP+A SFDTVG A D L +VG
Sbjct: 123 FAIGTDTGGSVRIPSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGA 182
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
VLL + +++ D ++L S R
Sbjct: 183 VLLNSTSRASGF--TRLYVPTDVMELVDEQSMRAL------------------------- 215
Query: 248 KDKVPSLQHFLSEGNKEQEYSIP--SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
PS+ H + + +E +I + RLLQ E HG+W+ P G
Sbjct: 216 ---APSINHVMESFSTIEEIAIAPQGFSTYMETFRLLQGKEIWQTHGEWIQKENPTFGED 272
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
I R A + ++ + + ELR + + LG+ GILV+PT PGP P LE
Sbjct: 273 IGSRFQWASTLTLLNMNYIEEKRRELRYFMYSQLGEEGILVLPTAPGPAPVKDTKGLELE 332
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
R R + IAG+SG QV+IP G D LP+ +S +A + D LLN V+
Sbjct: 333 NRRLRTLQMTCIAGLSGLPQVTIPAGELDGLPIGLSFIAGYSQDEKLLNWVK 384
>gi|384048378|ref|YP_005496395.1| peptidase M22, glycoprotease [Bacillus megaterium WSH-002]
gi|345446069|gb|AEN91086.1| Peptidase M22, glycoprotease [Bacillus megaterium WSH-002]
Length = 399
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 221/412 (53%), Gaps = 34/412 (8%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
+ AF++ + P + L + L+FA+KD+FDV GH++ GNPDW TH A+ A V
Sbjct: 5 WNAFVDSDLYVPPTGTGML--NNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVV 62
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
A+L GA G T DE+ Y +NGEN HYGTP NP + DR+PGGSSSGSAVAV A + D
Sbjct: 63 AALLKEGAALKGVTHTDELMYGLNGENAHYGTPVNPKSADRIPGGSSSGSAVAVAAGITD 122
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F++GTDTGGSVR+P+SYCGIFG+RPSH +ST G+IP+A SFDTVG A D L +VG
Sbjct: 123 FAIGTDTGGSVRIPSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGS 182
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
VLL + LV +L+ + ++ +
Sbjct: 183 VLLN------------------------------STSLVSGFTRLYVPTDVMELVDEQSM 212
Query: 248 KDKVPSLQHFLSEGNKEQEYSIP--SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
+ P ++H + + +E I + RLLQ E HG+W+ P G
Sbjct: 213 QALAPPIKHVMKSFSTTEEIVIAPQGFSTYMETFRLLQGKEIWQMHGEWIQKENPTFGDD 272
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
I R A + ++ + + ELR + + LG+ GILV+PT PGP P LE
Sbjct: 273 IGSRFQWASTLTLLNMNYIEEKRRELRYFMYSQLGEDGILVLPTSPGPAPVKDAKGPELE 332
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
R R + IAG+SG QV+IP G D LP+ +S +A + D LLN V+
Sbjct: 333 NRRLRTLQMTCIAGLSGLPQVTIPAGELDGLPIGLSFIAGYNQDEKLLNWVK 384
>gi|402300440|ref|ZP_10819942.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
alcalophilus ATCC 27647]
gi|401724419|gb|EJS97783.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
alcalophilus ATCC 27647]
Length = 390
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 240/409 (58%), Gaps = 32/409 (7%)
Query: 13 EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS 72
E+ L+P ++ LSG +FA+KD+F ++G+ + GNP+W TH A TA + + +
Sbjct: 11 EELTLEPLATGI---LSGKSFAVKDVFAIEGYTSTAGNPNWFATHKPAEETAEVITILRN 67
Query: 73 GGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGT 132
GA IG TI DE+ YS+NGEN HYGTP NP AP R+PGGSSSGSA V A LVDF++GT
Sbjct: 68 NGAKMIGTTITDELMYSLNGENIHYGTPVNPKAPTRIPGGSSSGSASVVAAGLVDFAIGT 127
Query: 133 DTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL 192
DTGGSVR+P+SYCGI+GFRP+H AVS G+IP+A+SFDTVGW D K+L + R+L+
Sbjct: 128 DTGGSVRIPSSYCGIYGFRPTHGAVSVDGLIPLAKSFDTVGWMTEDKKLLIEIARLLIS- 186
Query: 193 ADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQG-LVKSVEKLFGGHIIENVILGDYVKDKV 251
+ + + +++F ED L D+ T G L+K++EK VK+ +
Sbjct: 187 SQEKSESSFRKLLFPEDAWAL----VDKETNGELLKTIEK---------------VKEVM 227
Query: 252 PSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVW 311
P+ + + E N L+ R++Q YE HG+WV+ P GPGI ER
Sbjct: 228 PTHELIMLEEN--------GLSTWKEIFRIIQGYEIWQEHGEWVSATNPQFGPGIKERFA 279
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARA 371
A + + ++ ++ ++ L +L + +L++PTVPG P L + +E R++
Sbjct: 280 MASKITEEEFKQMAKLQAVIKERLFRILTEDTLLIVPTVPGVAPLLNLPEDQVEERRSKT 339
Query: 372 FSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
L +IAG++G QV+IP+ + P+++S++A D LL V L
Sbjct: 340 LQLSAIAGLAGLPQVTIPIDTNLEAPISVSIIAGPSQDIRLLEWVNKLE 388
>gi|403068359|ref|ZP_10909691.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oceanobacillus sp.
Ndiop]
Length = 391
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 226/416 (54%), Gaps = 33/416 (7%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
Y A++ K L S H L L GLTF++KD+ + GH G GNPDW +H A AP +
Sbjct: 5 YHAYVNK-DLTVDPSGHSL-LDGLTFSVKDVIAIKGHTNGAGNPDWLASHDEAGRHAPVI 62
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+L GA G T DE+ YS+NGEN HYGTP NP APDR+PGGSSSGSAVAV VD
Sbjct: 63 ERLLQHGARLHGVTHTDEIMYSLNGENYHYGTPVNPKAPDRIPGGSSSGSAVAVSGGSVD 122
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F+LGTDTGGSVR+P++YCGIFGFRP+H A+S GVIP+AQSFDT+GW A P I+ +VG
Sbjct: 123 FALGTDTGGSVRIPSAYCGIFGFRPTHGAMSMEGVIPLAQSFDTIGWMARSPAIMRKVGN 182
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
LL AD N ++ IF + + + V EKL G I + L D+
Sbjct: 183 ALLDEADQ-NDAGKTEFIFLKQAWEFLDEDTSNVLSAFTPIFEKL-GSKSIASASLSDW- 239
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
++A R +Q E HG W+ +P GP I+
Sbjct: 240 ----------------------------ANAFRYIQGIEIWQEHGKWIRQTRPAFGPDIA 271
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
R A + + ++ EL L+ LG++G+ VIPT PG PKL + LE
Sbjct: 272 ARFEWASTLNKDGAEKEFELRKELWKTLAEELGNNGVFVIPTTPGTAPKLNLASKELEER 331
Query: 368 RARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
R + L IAG++G QV+IP D +PV +S++A D LL LVE + T+
Sbjct: 332 RNKTMQLTCIAGLAGLPQVTIPAAEIDGMPVGLSIIANRNQDRRLLMLVEKIFETI 387
>gi|251799861|ref|YP_003014592.1| amidase [Paenibacillus sp. JDR-2]
gi|247547487|gb|ACT04506.1| Amidase [Paenibacillus sp. JDR-2]
Length = 395
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 181/418 (43%), Positives = 233/418 (55%), Gaps = 33/418 (7%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
Y AF+E + P + PL GLTFA+KD+F + G+ +G GNPDW RTHS TA ++
Sbjct: 5 YKAFVEPELELPP--VGEGPLRGLTFAVKDVFAIKGYTSGAGNPDWLRTHSPWEKTASSI 62
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+L+ GA G T DE+ YSING+N HYGTP NP APDR+PGGSSSGSAVAV A VD
Sbjct: 63 SKLLASGARLTGTTHTDELMYSINGQNDHYGTPVNPKAPDRIPGGSSSGSAVAVAAGAVD 122
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F+LGTDTGGSVRVPA+YCGI+GFRP+H VS GVIP+A S+DTVGW A D +L +VG
Sbjct: 123 FALGTDTGGSVRVPAAYCGIYGFRPTHDFVSIDGVIPLAPSYDTVGWMARDISLLRQVGD 182
Query: 188 VLLQLADDVNLVRPS--QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
VLL D R ++IFAE+ + + PS R G V
Sbjct: 183 VLLPGTTDAETPRQDFRRLIFAEEAWEKAE-PSCRKALGSV------------------- 222
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSI--PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
+Q +EG ++ S+ L A S A R Q E HG+W+ KP G
Sbjct: 223 -------CIQLVQTEGMTQEWRSVAPEGLEAWSHAFRTTQGREIWQTHGEWIVREKPVFG 275
Query: 304 PGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
I R A S + + +++ +R L LLGD G+L+IPT+PG P + A
Sbjct: 276 ESIGARFASASTISGAEAERDGALREIIRKRLRELLGDDGLLIIPTIPGTAPSRTIHGPA 335
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+E R R L IAG+SG QV+IP G D P+A+S++A D LL E
Sbjct: 336 VEERRFRTMQLSCIAGLSGLPQVTIPAGEVDGAPIALSVIAGVKQDLKLLRRAEQFEK 393
>gi|336113566|ref|YP_004568333.1| amidase [Bacillus coagulans 2-6]
gi|335366996|gb|AEH52947.1| Amidase [Bacillus coagulans 2-6]
Length = 394
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/395 (42%), Positives = 221/395 (55%), Gaps = 31/395 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G TFA+KD+F V GH GNPDW H AA AP + +L+ GA G T DE+
Sbjct: 23 LDGYTFAVKDVFAVKGHRNAAGNPDWYDFHPAAGENAPVIEWLLNEGARLTGMTHTDELM 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+NGEN HYGTP NP DR+PGGSSSGSAVAV A DF++GTDTGGSVR+P++YCGI
Sbjct: 83 YSLNGENFHYGTPVNPVLKDRIPGGSSSGSAVAVAAGCTDFAIGTDTGGSVRIPSAYCGI 142
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP--SQVI 205
FGFRPSH + GVIP+A SFDT+GW + DP IL +VG+VL + D +RP +
Sbjct: 143 FGFRPSHGVIKMKGVIPLAPSFDTIGWMSKDPGILYKVGQVLFKPDQD---IRPQFESIF 199
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
FAED +L+ T+ L++S H+++N + QH + +Q
Sbjct: 200 FAEDAWELAG----EETRKLLESKWH----HLLKNRV------------QHVVRTAIADQ 239
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-WEAVRTSAQKIDVC 324
+L + S A RLLQ E HG W+ +P GP I+ER W + T +
Sbjct: 240 -----TLKSWSHAFRLLQGREVWKTHGAWIEHARPQFGPDIAERFKWASTITEDSHWEKA 294
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
++ +R L LLG G+LV+PT PGP P +E R L IAG++G
Sbjct: 295 NQLRLNIRDKLRGLLGSSGLLVLPTTPGPAPATGRSMEEIEKTREHTMQLSCIAGLAGLP 354
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
Q++IP P+ +S++A + D LL VE L
Sbjct: 355 QLTIPFLTATGEPIGLSVVAGYRQDVKLLAWVEEL 389
>gi|374324241|ref|YP_005077370.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus terrae
HPL-003]
gi|357203250|gb|AET61147.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus terrae
HPL-003]
Length = 391
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 228/420 (54%), Gaps = 37/420 (8%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
+ A + + ++P+ Q LSGL+F +KD+F V + G GNP W +TH A A +
Sbjct: 5 WNAIVNQVTVEPTG---QGTLSGLSFMVKDVFAVRDNTNGAGNPCWLQTHGPAAEHAETL 61
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+L GA G T DE+ +S+NGEN HYGTP NP APDR+PGGSSSGSAVAV A L D
Sbjct: 62 SLLLQQGARLTGTTHTDELMFSLNGENVHYGTPVNPKAPDRIPGGSSSGSAVAVAAGLAD 121
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F+LGTDTGGSVRVP+SYCG++G RP+ VS GVIP+A SFDTVGW A DP+ L RVG+
Sbjct: 122 FALGTDTGGSVRVPSSYCGVYGMRPTQGIVSENGVIPLAPSFDTVGWMARDPETLCRVGK 181
Query: 188 VLL-QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
VLL Q A S+V+ ED +L+ S L +E L G
Sbjct: 182 VLLPQTASGSGF---SRVLIGEDAWELADTESK---DALASCLELLCG------------ 223
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
L+E ++ + L + R +Q YE HG W+ +P GP I
Sbjct: 224 -----------LAESHEAVRIAPQGLPEWMAMFRTIQGYEIWQEHGAWIEREQPVFGPDI 272
Query: 307 SERV-WEA-VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
+ R W + + Q+ +V + + E+R ++ LLG +LVIPT G PKL ++ +
Sbjct: 273 AGRFSWAGTIERADQEKEVER--RLEVRKHMADLLGTDAVLVIPTTTGVAPKLGLNGPLI 330
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
E R + L IAG+SG Q++IP PV ISL+ G D LL +L +K
Sbjct: 331 EERRVQTMRLTCIAGLSGLPQLTIPAAEVLGCPVGISLIVGPGQDRRLLEWAASLVPAVK 390
>gi|56965491|ref|YP_177224.1| amidase [Bacillus clausii KSM-K16]
gi|56911736|dbj|BAD66263.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 388
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 223/410 (54%), Gaps = 33/410 (8%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF++K + + + A L +G TFA+KD+F V G+ GNPDW +T A + +P++
Sbjct: 7 AFIDKDMKREGAKAGIL--AGKTFAVKDVFAVKGYTNSAGNPDWLKTAQPADADSPSIAK 64
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L+ GA G + DE+ YS+NGEN HYGTP NP DRVPGGSSSGSAVAV A+L DF+
Sbjct: 65 LLAAGADLRGMAVTDELMYSLNGENVHYGTPVNPYGADRVPGGSSSGSAVAVAAELTDFA 124
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+GTDTGGS+R+P+SYCGI+GFRPSH AV +GVIP+A+SFDTVGW A D ++L +G VL
Sbjct: 125 IGTDTGGSIRIPSSYCGIYGFRPSHGAVDISGVIPLAESFDTVGWMARDVELLKDIGTVL 184
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L D + + ++ L + P+ Q LV G I + D
Sbjct: 185 --LGDQTVEEEAGEQLLIDEALVGIAEPN---VQALVLQAADRLGAKPISR-----WTSD 234
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
++ EG + R LQ E HG+WV KP I R
Sbjct: 235 RI-------DEGFE--------------TFRHLQAREIWRQHGEWVQAAKPAFAADIGAR 273
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA 369
A Q++ + + +T ++ A +A + I+++PT GP PK LE RA
Sbjct: 274 FQWASTLPQQELPLYKDKQTAMKRAFAADFAPNDIVLLPTAAGPAPKRGGSGQELEAIRA 333
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ L SIAG++G Q++IP + LP+ +S + G D FLL+ L
Sbjct: 334 KTMKLTSIAGLAGCPQITIPFASVEGLPIGLSAIGCPGQDLFLLSWANRL 383
>gi|215272287|dbj|BAG84638.1| indole-3-acetamide hydrolase [Nicotiana tabacum]
Length = 167
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/166 (78%), Positives = 143/166 (86%), Gaps = 1/166 (0%)
Query: 4 RDSDYGAFMEKFVLQP-SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
+YGA +EKF LQP SS+ QLPL+GLTFA+KDIFDV+GH+TGFGNPDWA+THSAATS
Sbjct: 2 ESCEYGALIEKFTLQPICSSSEQLPLNGLTFAVKDIFDVEGHITGFGNPDWAKTHSAATS 61
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
TA VL +L GAT I KT+MDEMAYSINGEN HYGTP NP +PDRVPGGSSSGSAVAVG
Sbjct: 62 TATTVLTLLKAGATCIAKTVMDEMAYSINGENVHYGTPVNPVSPDRVPGGSSSGSAVAVG 121
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQS 168
AKLVDFSLGTDTGGSVRVPASYCGI+G RPSH VST GV PMAQS
Sbjct: 122 AKLVDFSLGTDTGGSVRVPASYCGIYGIRPSHGVVSTVGVTPMAQS 167
>gi|226226445|ref|YP_002760551.1| putative amidase [Gemmatimonas aurantiaca T-27]
gi|226089636|dbj|BAH38081.1| putative amidase [Gemmatimonas aurantiaca T-27]
Length = 404
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 222/392 (56%), Gaps = 26/392 (6%)
Query: 23 AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
A + PL GLTF +KD FDV GH TGFG+PDW RTH A P + +L+ GA +GKT
Sbjct: 28 ATEGPLVGLTFGLKDNFDVAGHRTGFGSPDWFRTHPPAMQNTPVLDTLLAAGARMVGKTH 87
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
+EM +S+ GEN HYGTP NP APDRVPGGSSSGSA AV LVDF++G+DTGGSVR PA
Sbjct: 88 TEEMTFSLTGENAHYGTPINPAAPDRVPGGSSSGSASAVAGGLVDFAIGSDTGGSVRAPA 147
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
S+CGI+G RP+H +S AG P+A FDT GWFA DP++L RVG+VL + P
Sbjct: 148 SFCGIYGLRPTHGRISLAGACPLAPMFDTCGWFARDPELLRRVGQVLFASSGAHESGEPG 207
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+++A D ++P V L+ +V + G +LG
Sbjct: 208 ALLYASDAFA-HTMPG--VDDALMPAVSAVSG-------VLGAL---------------- 241
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+ S L A R+LQ E HG WV ++P G I+ R A + + +++
Sbjct: 242 RPVTVSPDGLPAWYEVFRVLQFGEIWKTHGGWVRQMRPTFGAQIAPRFEAASKVTVPEVE 301
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + ++ L ALL D+ ++V+PTVP P+ + R R+ +LL IAG+ G
Sbjct: 302 AMTAERVRIQQRLDALLADNAVMVLPTVPDCAPRRGLPLPETVTVRERSLALLCIAGLGG 361
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
Q+S+PL + P+ +SL+A G+D LL+
Sbjct: 362 LPQLSMPLAKVEGGPIGLSLIAARGNDELLLD 393
>gi|307106484|gb|EFN54730.1| hypothetical protein CHLNCDRAFT_35982 [Chlorella variabilis]
Length = 449
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/406 (43%), Positives = 221/406 (54%), Gaps = 36/406 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GLT +KD FDV GH T G+P W TH A A AV A+L GAT IG +MDEM
Sbjct: 72 PLTGLTAVVKDCFDVAGHRTSNGSPAWLETHPPAQRNAAAVQALLDAGATIIGTNVMDEM 131
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ GEN HYGTP NP AP R+PGGSSSG+A AV A D LG DTGGSVRVPA +CG
Sbjct: 132 AYSLAGENAHYGTPANPAAPGRIPGGSSSGTAAAVAAGDADLGLGGDTGGSVRVPACHCG 191
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ--- 203
I G RP+H VS G +P+A SFDT GWFA D +L VG VLL D RP+Q
Sbjct: 192 ILGIRPTHGRVSLQGAVPLAPSFDTGGWFARDAGVLRAVGGVLL----DGGSRRPAQLRR 247
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
++ A D L+ + + L D + K+ + LS K
Sbjct: 248 LLVAADAFGLAEEATTKA---------------------LYDALSPKIDQVAALLS---K 283
Query: 264 EQEYSI-PSLAALS----SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
QE + S LS +A R+ Q +E HG WVT +P+ GPGI ER A S
Sbjct: 284 PQEVEVGSSTGGLSQAWFNAFRVHQAHEIWQQHGAWVTEHRPNFGPGIRERFQMAEGVSR 343
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
++ + + R L+ LLG G+L++PT P P P L L+ FR SL IA
Sbjct: 344 KQYEEAAQQRGAARQRLAELLGGDGVLMLPTAPAPAPLLNTPSDQLDAFRTSLISLTCIA 403
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
G+SGF QV++P+ + LPV + L+ GSD LL L E L L+
Sbjct: 404 GLSGFPQVNVPIADVEGLPVGLGLIGPPGSDEDLLELTEQLLAVLR 449
>gi|159481398|ref|XP_001698766.1| amidase [Chlamydomonas reinhardtii]
gi|158273477|gb|EDO99266.1| amidase [Chlamydomonas reinhardtii]
Length = 507
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 182/447 (40%), Positives = 237/447 (53%), Gaps = 27/447 (6%)
Query: 2 ASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
+S D AF++K + A + PL GLTFA+KD+FDV GH TGFGNP W TH AT
Sbjct: 59 SSDDDPNNAFIDKSLT--VQGAAEGPLKGLTFAVKDLFDVAGHRTGFGNPVWLDTHPPAT 116
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
TAPAV A+L GAT GKT MDE+AYS+NGEN HYGTP NP AP R+PGGSSSGSAVA
Sbjct: 117 RTAPAVQALLDAGATLRGKTHMDELAYSLNGENVHYGTPRNPAAPGRIPGGSSSGSAVAA 176
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWD--P 179
A V +LG+DTGGSVRVPA+YCG+FG RP+ + G P+A SFDT GW A
Sbjct: 177 AAGDVPLALGSDTGGSVRVPAAYCGLFGIRPTWGRTNLEGARPLAPSFDTAGWSALRAAV 236
Query: 180 KILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHII 238
++ G V + L D S + A C L+ P+ RV+ ++ L
Sbjct: 237 QVAVAAGDVDIGLGTDTGG---SIRVPASFCGLLALRPTWGRVSSEATTALGSLATRRRC 293
Query: 239 ENVILGDYVKDKVPSLQH--------FLSEGNKEQEYSIPSLAALSSAMRLLQRY----- 285
L + + +H G + PS + R+ R+
Sbjct: 294 VPPGLCCWTRHPGRPARHASPGGWWRVTPSGWPTRPQRRPS---TTPCRRISARWAAPSA 350
Query: 286 ---EFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDH 342
E HG WVT P GPGI +R A R + +++D + +R+ L LLG
Sbjct: 351 RGFEVWREHGAWVTEHNPAFGPGIKDRFIMASRITQEQVDAANVKRALIRSHLLTLLGSD 410
Query: 343 GILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISL 402
G+L +PT PGP P + P+ L+ +R R SL SIAG++G QV++P+ D LPV + L
Sbjct: 411 GVLALPTTPGPAPLVNTPPAELDAWRTRLISLTSIAGLAGLPQVNLPIASVDGLPVGLGL 470
Query: 403 LAKHGSDGFLLNLVETLHNTLKEELQR 429
+ GSD LL L E L L R
Sbjct: 471 IGPPGSDEALLELAEQLMGVLPHWQAR 497
>gi|449534001|ref|XP_004173958.1| PREDICTED: outer envelope protein 64, mitochondrial-like, partial
[Cucumis sativus]
Length = 269
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/266 (51%), Positives = 175/266 (65%), Gaps = 2/266 (0%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
QPS A + L+GLTFA+KD+FDV +VTGFGNPDW RTH A T V +L GA
Sbjct: 6 QPSPPAARQSLAGLTFAVKDVFDVKDYVTGFGNPDWKRTHDVAEKTDEMVTLLLKNGAAC 65
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
+GKT+MDE+ + I GENK YGTPTNP VPGGSSSGSAVAV +LVDF+LGTDT G
Sbjct: 66 VGKTVMDELGFGITGENKQYGTPTNPKLSSFVPGGSSSGSAVAVAGELVDFALGTDTVGC 125
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R+PAS+CGIF FRPSH + V+ + S DTVGWFA DP L+RVG VLL+L + V
Sbjct: 126 IRIPASFCGIFAFRPSHGVIPMNRVLSNSPSLDTVGWFARDPSTLHRVGHVLLKL-NSVE 184
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
R +++ A+D QLS +P + + K++E L G +++ G+Y+ VPSL+ F
Sbjct: 185 PRRMRRLVIADDLFQLSKVPLQKTVHVVEKAIENLSGYQSPKHMNFGEYLASNVPSLKGF 244
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQ 283
++ Q+ I L ALSS M LLQ
Sbjct: 245 HNQSPTLQK-GITILKALSSVMILLQ 269
>gi|308809489|ref|XP_003082054.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
gi|116060521|emb|CAL55857.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
Length = 612
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 240/445 (53%), Gaps = 33/445 (7%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA-TSTAP 65
+ GAF+E PL G+ FA+KDIFDV G GFG+P + T A
Sbjct: 48 ELGAFVESERDATMDGRESGPLRGMKFAVKDIFDVRGRRCGFGSPAFEATAGETPKRNAE 107
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
V VL+ GA++IG T MDE+AY++NGEN HY TP NP A + +PGGSSSGSAVA L
Sbjct: 108 CVDDVLNAGASAIGMTTMDELAYAVNGENPHYRTPINPRARNLIPGGSSSGSAVACAGAL 167
Query: 126 --VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
DF+LGTDTGGSVR+PASYCG+FG R SH VS GV +A SFDTVGWFA +L
Sbjct: 168 RGCDFALGTDTGGSVRIPASYCGVFGIRTSHGLVSMRGVQALAPSFDTVGWFARSIDVLR 227
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCL--QLSSIPSDRVTQGLVKSVEKLFGG-----H 236
RVG VLL AD+ +PS ED + + SS + V ++ ++ G +
Sbjct: 228 RVGDVLLPSADEHAPTKPSAWYLLEDSVSDKRSSPHAQCAAVAAVAALNEIDRGKFRRMN 287
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+ E++++G P Q + G +E L L +R+ E N G W
Sbjct: 288 LTEHLLVG------CPKFQALV--GRRED----CGLDCLREVLRVTMGAEIWENLGPWYK 335
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
+P L P + R+ A + S ++++ + ++ E+R + LL + +LV+PT PG P+
Sbjct: 336 KEQPVLDPAVEGRLEAAAKLSPTQVELFKEIREEVRETMDRLLDNGVVLVLPTTPGKAPE 395
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNL--PVAISLLAKHGSDGFLLN 414
+ A E +R + F L IA + G QVSIPL + N+ P +SL+ + +D L++
Sbjct: 396 RGLGEKATEEWRKKCFELTCIASLCGLPQVSIPL-IAPNVEGPQGLSLIGGYQTDRMLMD 454
Query: 415 --------LVETLHNTLKEELQRMS 431
LV+ + L+ EL R++
Sbjct: 455 AARDLVVELVDAYPDILEAELLRLN 479
>gi|86749206|ref|YP_485702.1| amidase [Rhodopseudomonas palustris HaA2]
gi|86572234|gb|ABD06791.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 399
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 214/377 (56%), Gaps = 30/377 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GLTFA+KD FDV G TG G+P+W TH T ++P V + + G T +GKT DEMA
Sbjct: 28 LAGLTFAVKDFFDVAGLPTGAGSPEWLATHPVPTQSSPVVDRLFAAGGTMVGKTHTDEMA 87
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S+NGEN HYGTP NP AP R+PGGSSSGSA A LVDF++G+DTGGSVR+PASYCG+
Sbjct: 88 WSLNGENAHYGTPINPAAPGRIPGGSSSGSAAATAGGLVDFAIGSDTGGSVRLPASYCGV 147
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL-VRPSQVIF 206
+G R +H + G +P+A S+DTVGWF+ ++ RVG VLL D V RP +V+
Sbjct: 148 YGIRTTHGRIPLDGAVPLAPSYDTVGWFSRSAALMARVGEVLL---DGVRAPRRPKRVLI 204
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A D L + RV + L + +L +LG+ +V Q
Sbjct: 205 ARD---LFAALEPRVVEVLQPGLAQL-------AAMLGEPEPVEVAGDQR---------- 244
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
A +A R+LQ E HG WV VKP GPG+ ER A ++ ++
Sbjct: 245 ------PAWRNAFRVLQSAEAWAAHGAWVNAVKPAFGPGVKERFAAAAVLDPAEVVAAKA 298
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
++ + A + LL D +L+ PT PG P ALE FRAR+ LL AG +G Q+
Sbjct: 299 LRDTITATMRTLLQDDAVLIAPTAPGIAPLRNSTGEALETFRARSLELLCPAGHAGLPQL 358
Query: 387 SIPLGLHDNLPVAISLL 403
S+PL D+ P+ +SL+
Sbjct: 359 SLPLATLDDCPIGLSLI 375
>gi|298293565|ref|YP_003695504.1| amidase [Starkeya novella DSM 506]
gi|296930076|gb|ADH90885.1| Amidase [Starkeya novella DSM 506]
Length = 401
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 224/411 (54%), Gaps = 38/411 (9%)
Query: 8 YGAFM-EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
+GAF E V P+ PLSGL+FAIKD+FDV G TGFG+P W TH+AAT TA A
Sbjct: 14 FGAFCHENHVAGPAIG--DGPLSGLSFAIKDVFDVAGSCTGFGHPTWLATHTAATQTAAA 71
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V +LS GA G+TI DE+ YS++GEN HYG P NP A +R+PGGSSSGSAVAV A V
Sbjct: 72 VTRLLSTGAALRGRTISDELCYSLSGENFHYGMPVNPAARERLPGGSSSGSAVAVAAGQV 131
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DF++GTD GGSVRVPASYCG+FG RP+H VS GV A FDTVGWFA D +L RVG
Sbjct: 132 DFAIGTDCGGSVRVPASYCGLFGLRPTHGRVSLEGVSRFAPRFDTVGWFARDAALLKRVG 191
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
VLL R V+ A D + P R L K+VE+L
Sbjct: 192 EVLLGSTAPQGFDR---VLVATDAFEQCD-PQARAL--LEKAVERL-------------- 231
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
PS H G L R LQ +E + G W+ +P G G+
Sbjct: 232 ---GSPSPLHLSPIG----------LDRWLDTFRTLQAWEVWQSLGGWINQTRPSFGDGV 278
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE- 365
+R+ A + + + + L +GD G++++PT PG PP + +E
Sbjct: 279 GQRLAAAEQVGRADAEAARQRADAIALELDEAIGD-GLVLLPTTPGAPPLRATASTEIEN 337
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+R RA LL AG+ G Q++IP+G D PV +S++A+ G D L++L
Sbjct: 338 AYRYRAMQLLCPAGLGGLPQLTIPVGTVDGAPVGLSIMARRGKDMDLMDLA 388
>gi|433461543|ref|ZP_20419152.1| peptidase M22, glycoprotease [Halobacillus sp. BAB-2008]
gi|432190043|gb|ELK47094.1| peptidase M22, glycoprotease [Halobacillus sp. BAB-2008]
Length = 410
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 212/394 (53%), Gaps = 37/394 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GLTF +KD+ V GH GNPDW TH+ A AP + +L GA G T DE+
Sbjct: 20 LDGLTFGVKDVISVAGHTNAAGNPDWLNTHAPAQYNAPVIDRLLEEGALLHGMTHTDELM 79
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+NGEN HYGTP NP +P +PGGSSSGSA A V F+LGTDTGGSVR+P+SYCGI
Sbjct: 80 YSLNGENVHYGTPINPKSPACIPGGSSSGSAAAASGGEVHFALGTDTGGSVRIPSSYCGI 139
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+GFRP+H A+ GVIP+A SFDT+GW A DP IL+RVG + + R ++ A
Sbjct: 140 YGFRPTHGAIDVQGVIPLAPSFDTIGWMADDPVILSRVGDIFFRRGK--GSPRLEKIKIA 197
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D +L + ++ V+ +F KE+E
Sbjct: 198 SDLWELLDPDLHKCYAAPLRQVKAMF-----------------------------KEEET 228
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+ S L + R+LQ E HG W+T V+P I R+ A S Q +
Sbjct: 229 RLLSEDGLGKWADTFRVLQAQEIWQEHGGWITDVRPRFAYDIYRRLLWARSISGQDMTER 288
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
++ + +++A +A +GD G+L++PT P PPK S LE R + L IAG++G
Sbjct: 289 KAYRNKIKAWTNAWIGDDGVLLLPTTPAGPPKRGTPASRLEDIRTKTMKLSCIAGLAGLP 348
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVET 418
QV+IPL PV+ISL+A G D L L+ET
Sbjct: 349 QVTIPLPSTVEGPVSISLIAAKGQD---LKLLET 379
>gi|339627640|ref|YP_004719283.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfobacillus
acidophilus TPY]
gi|379007997|ref|YP_005257448.1| amidase [Sulfobacillus acidophilus DSM 10332]
gi|339285429|gb|AEJ39540.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfobacillus
acidophilus TPY]
gi|361054259|gb|AEW05776.1| Amidase [Sulfobacillus acidophilus DSM 10332]
Length = 399
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 224/396 (56%), Gaps = 37/396 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSG FA KD+F V G+ T GNPDW RTH T+TAPA+LA+L GA GKT DE+
Sbjct: 22 PLSGTRFAAKDVFAVKGYPTSGGNPDWFRTHPPETTTAPAILALLKAGAALDGKTHTDEL 81
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +NGEN HYGTP NP APDR+PGGSSSGSAVAV A +VDF++GTDTGGSVR+PASY G
Sbjct: 82 MYGLNGENVHYGTPVNPKAPDRIPGGSSSGSAVAVSAGMVDFAIGTDTGGSVRIPASYTG 141
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ--- 203
IFG RP+ + GVIP++Q+FDTVGWF+ DP +L VG VLL RP+Q
Sbjct: 142 IFGMRPTVGRTTLTGVIPLSQTFDTVGWFSRDPGLLALVGSVLLS-----GHSRPAQFRR 196
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
VI A D L P + Q V + + F E +
Sbjct: 197 VIIASDAWALMEPPYRPMLQSWVDRIVQRF--------------------------EQVE 230
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VWEAVRTSAQKID 322
E+ + L + R++Q Y+ N G+W+T KP GPG ER W A T ++ D
Sbjct: 231 EEPIAPEGLDQWAQGFRVIQGYDIWQNFGEWITHTKPRFGPGFRERFAWTATITVEER-D 289
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + + ++ L+ LG I+++PT PGP P+ L FR R L +IAG+ G
Sbjct: 290 MWNAKRQIWQSNLAERLGTDTIILLPTAPGPAPQRNTPLPILNAFRDRVLQLTAIAGLGG 349
Query: 383 FCQVSIP-LGLHDNLPVAISLLAKHGSDGFLLNLVE 417
Q+S+P + + P+ +S++ G+D L+ V+
Sbjct: 350 LPQISLPGVVSPEGYPLGLSVIGGSGTDEALMEWVQ 385
>gi|402774032|ref|YP_006593569.1| amidase [Methylocystis sp. SC2]
gi|401776052|emb|CCJ08918.1| Amidase [Methylocystis sp. SC2]
Length = 391
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 212/401 (52%), Gaps = 32/401 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG +F +K+ DV G+V+ G+P WA TH+ A AP V +L GA +G+T MDEMA
Sbjct: 22 LSGASFVVKENIDVAGNVSTNGHPKWAATHAPAERDAPVVDRLLDAGARLVGRTQMDEMA 81
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP A +R PGGSSSGSAVAV A LV+F++GTDT GS R PA++CG+
Sbjct: 82 YSLLGANPHYGTPINPAAQNRHPGGSSSGSAVAVAAGLVNFAIGTDTAGSCRAPAAFCGV 141
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL-ADDVNLVRPSQVIF 206
FGFR SH AV+ G+IP+A SFD +GWFA D ++ VG LL A++ L + +
Sbjct: 142 FGFRASHGAVAMDGIIPLAPSFDAIGWFARDIGVMASVGEALLPANAENAEL---KEAVL 198
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + G V +++ G E + D+ K +L HF
Sbjct: 199 LTDAFSGVGMDFASAAAGPVDALKT--SGPWREATLGDDFFKT---ALGHF--------- 244
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
R +Q +E +HG W++ P G G+ +R A + + + ++
Sbjct: 245 -------------RNMQAFEAWASHGAWISANSPTFGKGVEQRFAYAAKITPDQKKAAEA 291
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+ + R + ALLG G LV PT P P L L+ R + L IA G Q+
Sbjct: 292 FRDDARKKIDALLGSQGFLVSPTAPFRAPLLTESEETLDAKRYQMMRLFLIASFFGLPQI 351
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
SIPL D PVA+S + + GSD L+ L + +K+ L
Sbjct: 352 SIPLPTTD-APVALSFIGRRGSDHALIALAQRFCAQMKKSL 391
>gi|398837197|ref|ZP_10594507.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398209188|gb|EJM95869.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 393
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/402 (41%), Positives = 227/402 (56%), Gaps = 29/402 (7%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P +S+ PL+GL A+KDIFDV G+ TG GNP T +APAV A+L GA +
Sbjct: 15 PVASSPDGPLAGLRLAVKDIFDVAGYPTGCGNPHMLAMSGIKTRSAPAVQALLDAGARFV 74
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GK DE+A+S+NG N H+GTP N APDR+PGGSSSGSA AV L D +LGTDTGGSV
Sbjct: 75 GKVHTDELAFSMNGRNAHFGTPRNGAAPDRIPGGSSSGSAAAVSNDLADIALGTDTGGSV 134
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R PAS+CG+ G RP+H +S A V+P++ +FDT GWFA DP + RVG VLL D V L
Sbjct: 135 RTPASHCGLIGLRPTHGRISLADVMPLSPTFDTCGWFARDPGVFARVGEVLLG-EDSVVL 193
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
+ + A D L L + RV ++++ G +LG K S+
Sbjct: 194 PENPRAMVAADVLALL---APRVQAVFCATLDRFAG-------VLGTPQPVKTASV---- 239
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
S AL A R +Q Y+ +HG+ + LGPG++ER + +
Sbjct: 240 ------------SFEALFWAFRFIQGYQAWQSHGEHIRRHDFQLGPGVAERFAWSATVTP 287
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS-ALEVFRARAFSLLSI 377
Q++ +V+ R + LLG G+L++PTVP P+L +DP ALE +R +A +L +
Sbjct: 288 QQMQQHSAVRWSFRDDFARLLGADGVLLLPTVPDIAPRL-IDPEPALEDYRNQAVRMLCL 346
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
AG+SG Q+S+PL D+ P +SL+ GSD L+ L
Sbjct: 347 AGLSGLPQISLPLMRLDDAPFGLSLIGPPGSDRSLVRFAARL 388
>gi|332306574|ref|YP_004434425.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173903|gb|AEE23157.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
Length = 411
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 214/411 (52%), Gaps = 37/411 (9%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P+ A L LSG+T A+KD+F + G T GNPDW +H TAPAV +L GA +
Sbjct: 31 PAKQADNLMLSGVTLAVKDLFHIKGLPTTAGNPDWLASHPIPVHTAPAVETLLENGAQLV 90
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKTI DE+AYS+NG+N HYGTP N APDR+PGGSSSGSAVAV LGTDTGGS+
Sbjct: 91 GKTITDELAYSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSI 150
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDV 196
RVPASY G+FG RP+H +S+ ++ +A SFDTVGW D +L +V V + DD
Sbjct: 151 RVPASYNGLFGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFFGDKHIDDA 210
Query: 197 ----NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP 252
++ + S++ FA++ Q S+ +T VE F I+E+ + D
Sbjct: 211 SNSQDIAQNSKIGFAQELAQQCEY-SEALTTAYHSMVEAPF---ILESGLSSD------- 259
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VW 311
SL S R+LQ YE HG+W+T P P I +R W
Sbjct: 260 ------------------SLIEASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRFAW 301
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARA 371
A + Q+ + + + + ++ L ++ +PT PGP P + L +R
Sbjct: 302 CATIDNQQRQQALEK-QAKFISHINHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTL 360
Query: 372 FSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
L IAG+ G Q+ +PL ++ + P+ SL+ + D L+ + L T
Sbjct: 361 MKLTCIAGLCGLPQLHVPLPINPHAPMGFSLIGQKNHDKQLIEIARMLLET 411
>gi|317127954|ref|YP_004094236.1| amidase [Bacillus cellulosilyticus DSM 2522]
gi|315472902|gb|ADU29505.1| Amidase [Bacillus cellulosilyticus DSM 2522]
Length = 395
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 224/419 (53%), Gaps = 31/419 (7%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
D+ AF + S+ L G+T AIKD+F + G + G GNPDW RTH A A
Sbjct: 2 DFNAFNRSLNIHRSNQGR---LKGVTVAIKDVFSIKGLIAGAGNPDWERTHEPAQKNAEV 58
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V +L G T G T DE+ +S+NGEN HYGTP NP A +RVPGGSSSGSAVAV A LV
Sbjct: 59 VEQLLEEGVTITGTTHTDELMFSLNGENYHYGTPVNPTAQERVPGGSSSGSAVAVSAGLV 118
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
D +GTDTGGSVR+P+SYCGI+GFRP+H AVST G+IP+A FDTVGW ++L VG
Sbjct: 119 DVGIGTDTGGSVRIPSSYCGIYGFRPTHGAVSTEGLIPLASQFDTVGWMTKSSELLYDVG 178
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
L+ D +++I ED + S+ +D T+ K ++ + G
Sbjct: 179 LTLINQPDYKTSF--TKLIVPEDIV---SLANDECTETFTKHLDGMKGNF---------- 223
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
DKV + +EG + + R LQ YE HGDW+ P GP I
Sbjct: 224 --DKVITTT-LATEG----------IETWFNTFRTLQGYEVWQTHGDWIKETNPKFGPDI 270
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
+R A + ++ + + +++ + L+ I+++PT PG P L LE
Sbjct: 271 EDRFNWASTIKEEDVEKARLKRAQIQNRVQELIDQDSIVLMPTAPGVAPYLNGRGEVLEN 330
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R R + I+G+ G+ Q+S+P+ + +PV IS++A D LL+L L + K+
Sbjct: 331 QRKRMLLMTCISGLLGYPQLSLPVMHINGIPVGISMIAAKNQDLKLLHLANELASDKKK 389
>gi|145352000|ref|XP_001420347.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580581|gb|ABO98640.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 576
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/423 (38%), Positives = 226/423 (53%), Gaps = 36/423 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST-----APAVLAVLSGGATSIGKT 81
PL + F +KDIFD++G GFG+P + RT + A V +L GA+++G T
Sbjct: 39 PLKNVKFVVKDIFDIEGRRCGFGSPAFKRTGGKGGTAGAKRHARCVRTLLEAGASAVGMT 98
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL--VDFSLGTDTGGSVR 139
MDE+AY+INGEN HYGTP NP A VPGGSSSGSAVA A L +F+LGTDTGGSVR
Sbjct: 99 TMDELAYAINGENAHYGTPINPRARALVPGGSSSGSAVACAAALRGCEFALGTDTGGSVR 158
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
VPASYCG++G R SH +VS GV +A SFDTVGWFA +L RVG VLL D
Sbjct: 159 VPASYCGVYGIRTSHGSVSMRGVQALAPSFDTVGWFARSIDVLQRVGDVLLPEPDKHAPT 218
Query: 200 RPSQVIFAEDCLQLSSIPS--DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
PS+ + ED + + + K + ++ E++++G F
Sbjct: 219 EPSRWLLLEDACAAVAAVTALHEIAPADFKRM------NLTEHLLVG---------CPKF 263
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
S N ++Y L L +R+L E N G W T KP LG + R+ A +
Sbjct: 264 RSLVNGREDY---GLDCLREMVRVLMGAEIWENLGKWYTEEKPKLGAAVKARMEAASKLD 320
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A +++ + V+ E+R + +L I ++PT PG PK A E +R + F LL I
Sbjct: 321 ADEVERLKEVREEVREEVDRILDGGAIFILPTTPGKAPKRGQSDQATESWRRKCFELLCI 380
Query: 378 AGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLN--------LVETLHNTLKEELQ 428
A + G QVSIPL + P +SL+A + D L+ LVE + L+ EL+
Sbjct: 381 ASLCGLPQVSIPLEAPNIEGPQGLSLIAGYQMDKMLIGAARQIVPALVEAYPDILEAELE 440
Query: 429 RMS 431
R++
Sbjct: 441 RLN 443
>gi|407697710|ref|YP_006822498.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Alcanivorax
dieselolei B5]
gi|407255048|gb|AFT72155.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Alcanivorax
dieselolei B5]
Length = 389
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 222/394 (56%), Gaps = 33/394 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GLTFA+KD+FD+ G VTG G P W + A T+P + +L+ GA +GKT DE+
Sbjct: 22 PLQGLTFAVKDVFDIAGTVTGVGQPSWRASQPPARHTSPMIETLLAAGAELVGKTHTDEL 81
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
YS+ G+N HYGTP NP P VPGGSSSGSA V A LVDF+LG+DTGGSVRVPASYCG
Sbjct: 82 TYSLAGQNAHYGTPPNPAVPGAVPGGSSSGSASVVAAALVDFALGSDTGGSVRVPASYCG 141
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G RP+H V +A+SFDT+GWFA D +++ R+GR+LL D P +++
Sbjct: 142 IHGLRPTHGVVDYRHCAHLAKSFDTLGWFARDARLMARIGRILLPAGDRPA---PRRLLL 198
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
E+ L S +D V+Q L V G+ + V G + S GN +
Sbjct: 199 VEEALAQSD--ADVVSQ-LEARV-----GNGLPGVTFGGSI-----------SVGNLDTY 239
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ +A R LQ YE G W+ T +P GPG+ ER A R SA + + +
Sbjct: 240 F---------NAFRPLQAYEAWARFGSWIETEQPVFGPGVKERFEAASRISAAEAEDARE 290
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
LR + ALLG+ +L +PT P LQ D + +E R R + ++AG +G Q+
Sbjct: 291 QCQALRTRIRALLGEDTLLCLPTTPTSALPLQADEARVEDIRGRTLRMTALAGTTGLPQL 350
Query: 387 SIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETL 419
S+PL LHD + PV +SL+ SD LL+L L
Sbjct: 351 SLPL-LHDRDGPVGLSLIGPASSDQQLLDLAARL 383
>gi|154247978|ref|YP_001418936.1| amidase [Xanthobacter autotrophicus Py2]
gi|154162063|gb|ABS69279.1| Amidase [Xanthobacter autotrophicus Py2]
Length = 393
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 162/384 (42%), Positives = 212/384 (55%), Gaps = 29/384 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GLTFA+KD+ DV G TG G+PDW TH A +A AV +L GA+ GKTI DE+
Sbjct: 25 PLAGLTFAVKDVMDVAGTSTGNGHPDWLTTHPPAARSAVAVDRLLDAGASLAGKTIADEL 84
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
YS+ GEN HYGTP NP APDRVPGGSSSGSA A +VDF+LGTD GGSVRVP+SYCG
Sbjct: 85 CYSLTGENVHYGTPLNPAAPDRVPGGSSSGSASATAGSVVDFALGTDCGGSVRVPSSYCG 144
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FG RP+H + GV P A SFD VGWFA D +L RVGRVLL A L+ ++++
Sbjct: 145 LFGMRPTHGRIPLEGVAPFAPSFDCVGWFARDAGLLERVGRVLLADAAPAPLL--TRLLA 202
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ + S + ++ + E + G E
Sbjct: 203 PREAFAMLSPEAAAALAPALRLAQ--------ETIAPG------------------AEIA 236
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ L A S+ R LQ E + G W+ V+P GPG+ ER A S ++V +
Sbjct: 237 LAPDGLDAWSATFRTLQAAEIWASVGPWIEAVRPAFGPGVKERFDAARTISPSAVEVACA 296
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF-RARAFSLLSIAGVSGFCQ 385
+ +RA L LL ++PTVP P P M + +EV R A +LL IAG+ G Q
Sbjct: 297 HRAAIRARLDDLLQPGTAFLMPTVPRPAPLRGMATAQVEVVTRHLAMNLLCIAGLGGLPQ 356
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
VS+PL + +P +SL+ GSD
Sbjct: 357 VSLPLARLEGVPFGLSLVGPAGSD 380
>gi|399020129|ref|ZP_10722269.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398096139|gb|EJL86468.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 400
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 164/402 (40%), Positives = 228/402 (56%), Gaps = 33/402 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSG+ FA+KDIFDV G TG GNP T++AP+V+A+ GA +GKT DE+
Sbjct: 26 PLSGIRFAVKDIFDVAGFPTGCGNPHMLAMSGVKTASAPSVVALAQAGARFVGKTYTDEL 85
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+NG+N H+GTP N APDR+PGGSSSGSA AV L D +LGTDTGGSVR PAS+CG
Sbjct: 86 AFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADVALGTDTGGSVRAPASHCG 145
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV---RPS- 202
+ G RP+H+ VS G + +A SFDT GWFA D +RVG VLL+ +D L+ PS
Sbjct: 146 LIGLRPTHARVSLKGCMDLAPSFDTCGWFARDIDSFSRVGEVLLR--EDTCLLPDGAPSM 203
Query: 203 -QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
QV+ A D L L RV ++++E+L G ++G + K
Sbjct: 204 PQVLVAADVLALL---EPRVQAVFMQTLERLAG-------VIGTPLPVKT---------- 243
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+ PS AL A R +Q YE +HG+ + LGPG++ER + + + Q++
Sbjct: 244 ------ATPSFEALYWAFRYIQGYEAWQSHGETIVRHDLQLGPGVAERFAWSSQITPQQM 297
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ +V+ R LLG ++V+PT+P P L LE +R +A +L +AG+S
Sbjct: 298 EEHSNVRDRFREDFLRLLGSDRVIVLPTMPDVAPLLSESEQVLENYRNQAVRMLCLAGLS 357
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G Q+S+PL D P S++ GSD L+ L L + L
Sbjct: 358 GCPQISLPLMTLDGAPFGFSIIGPLGSDQALIRLSRKLIDEL 399
>gi|375265374|ref|YP_005022817.1| amidase [Vibrio sp. EJY3]
gi|369840695|gb|AEX21839.1| amidase [Vibrio sp. EJY3]
Length = 393
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 215/409 (52%), Gaps = 44/409 (10%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q L+GL+F KD+FDV+G+VTG GNP W THS A ST+ ++++L+ GA G+ D
Sbjct: 21 QGSLNGLSFVFKDLFDVEGYVTGAGNPKWLETHSKAESTSLLIISLLNAGAECKGRVQTD 80
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+AYS+NG N HYGTP NP APD +PGGSSSGSAVAV VDFS+GTDTGGSVRVPASY
Sbjct: 81 ELAYSLNGINVHYGTPVNPLAPDCLPGGSSSGSAVAVAKGDVDFSIGTDTGGSVRVPASY 140
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+FG RP+ +S +A+SFDT G F+ D L V
Sbjct: 141 CGLFGLRPTLGQLSLESSFTLAESFDTAGVFSRDLSTLENV------------------- 181
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ + + Q + K++ I++ + +++ L+ + N +
Sbjct: 182 --------YACLGPETQAQTVAKTL-------ILDQSLSKTLGNERLEELKQWADSANIQ 226
Query: 265 QEYSIP------SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
EYS L LS+ R +Q YE + H W+ + L P I ERV A SA
Sbjct: 227 LEYSNALQDAGYDLGELSALFRTIQGYEIIDRHSAWLDEWQHTLAPAIQERVVWARTISA 286
Query: 319 QKIDVCQSVKTELRAALSALLGDHGIL-VIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
Q + + + + L+ L D L V+PT PG PKL + L +R+ L S+
Sbjct: 287 QDYRKGKEQQAKFTSWLAEQLADKDTLWVLPTTPGKSPKLTTPDADLAEYRSDLMGLTSL 346
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
AG+SGF Q+ IP+ N P +SLL S+ +L+ T + +K E
Sbjct: 347 AGLSGFPQLHIPMNNVTNGPCGVSLLGSANSE---YDLIATASSLIKGE 392
>gi|255074227|ref|XP_002500788.1| predicted protein [Micromonas sp. RCC299]
gi|226516051|gb|ACO62046.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 385
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 208/399 (52%), Gaps = 31/399 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
PL+GLTFA+KD DV GH TG G P W TH A AP V ++L+ GA +GKT MDE
Sbjct: 6 PLAGLTFAVKDNLDVAGHRTGCGQPTWLDTHPEPARQHAPPVASLLAAGAACVGKTQMDE 65
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+A+++ GEN HYGTP NP AP+RVPGGSSSGSAVAV A D +LGTDT GSVRVPASYC
Sbjct: 66 LAWALQGENHHYGTPINPAAPERVPGGSSSGSAVAVAAGYADVALGTDTAGSVRVPASYC 125
Query: 146 GIFGFRPSHSAV-STAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL--ADDVNLVRPS 202
G+ GFRP+H V +T G +P+A SFD VGWFA D + R G VLL A D
Sbjct: 126 GLCGFRPTHGRVDATRGCVPLAPSFDVVGWFARDATTMLRCGSVLLPPWGAWDTAFDLRF 185
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
A D +L + L ++V + G + G D + G
Sbjct: 186 DGAIARDAFELC---DEETRATLREAVARACGPGPLGEAGGGTVEVD--------VGGGG 234
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV--------WEAV 314
S P L + R++Q E HG WV+ +P GPG+ ER EA
Sbjct: 235 -----STPPLTEWWNVFRVIQANEVWRAHGAWVSEHQPRFGPGVKERFEGAGGVTDAEAA 289
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
S + + S+++ + + G L +PT PGPP D +E FR R L
Sbjct: 290 EASKTRDAIAASMESTM---VDEATGKDRFLFLPTSPGPPLASGADAQTVESFRNRQLRL 346
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
+ AG++ Q ++P+ P+ +S++ G+D LL
Sbjct: 347 TAAAGLARLPQATVPVPRRSGPPLGLSVVGPRGTDEALL 385
>gi|223973013|gb|ACN30694.1| unknown [Zea mays]
Length = 292
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/232 (53%), Positives = 166/232 (71%), Gaps = 5/232 (2%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+ + L QP PL+GL FAI D V G++T FG+ +WA+TH+A
Sbjct: 35 DHGAFVARLELLPPPQPPPPQAPHPLTGLCFAIADALHVSGYITSFGSLEWAKTHNAEVL 94
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+ V A++ GGA +GKT++DEMAYSI+GEN+++ TPTNP APDRVPGG SSGSAVAV
Sbjct: 95 TSSVVSALVDGGAICVGKTVIDEMAYSIHGENRYFDTPTNPAAPDRVPGGCSSGSAVAVA 154
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
+VDF+LG D+ G VR+P +YCG+ FRPSH+ VS +GVIP+A S DT+GWFA DP +L
Sbjct: 155 GGMVDFALGIDSIGGVRIPGAYCGVLAFRPSHAVVSNSGVIPVAPSLDTIGWFAKDPSVL 214
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG 234
+RVG +LL+L + +P A+DC +LS IP+ R+TQ + KSVEKLFG
Sbjct: 215 HRVGHLLLRL-PYAGIRQPRIFYIADDCFELSKIPARRLTQVVTKSVEKLFG 265
>gi|407781884|ref|ZP_11129100.1| amidase [Oceanibaculum indicum P24]
gi|407206923|gb|EKE76867.1| amidase [Oceanibaculum indicum P24]
Length = 392
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 219/394 (55%), Gaps = 29/394 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGLTFA KD+FD++GHVTG GNPDW TH+ AT+TA +V +L GA+ GKTI DE+
Sbjct: 25 PLSGLTFAAKDLFDIEGHVTGAGNPDWLATHAPATATASSVRKLLDAGASLYGKTITDEL 84
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N HYGTP NP PDR+PGGSSSGSA AV LVD +LGTDTGGS+RVPA+ CG
Sbjct: 85 AYSLAGVNMHYGTPVNPAGPDRLPGGSSSGSASAVAGGLVDTALGTDTGGSIRVPANNCG 144
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G R +H V+ G++P+A SFDTVGWF D + + R+G VLL + R ++
Sbjct: 145 LYGIRTTHGRVAKDGLVPLADSFDTVGWFTRDARTMARIGEVLLGPRESFPDGR---LVI 201
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A DC L S + LV + G +H+ +
Sbjct: 202 ATDCFDLVSADVRAALKPLVDRLIAAVGP-------------------RHYAT------- 235
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ +A R +Q +E HG+W+ KP + P I+ER + +A+++
Sbjct: 236 LNPDGFDVWFAAFRQIQGHEAWQAHGEWIAKTKPKMAPEIAERFNLGRQVTAEQVAEAGK 295
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+ + R L+A+L +L +P GP P M +A +RA L G++G Q+
Sbjct: 296 VREKARQRLAAMLQPGDVLCLPASSGPAPLKSMSGAAEGAYRAAMLKLTCTGGLTGMPQM 355
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
++PL D P+ IS+ GSD LL+L E L
Sbjct: 356 TLPLAKLDGCPLGISIAGLPGSDWMLLDLAEKLE 389
>gi|192360244|ref|YP_001981097.1| amidase [Cellvibrio japonicus Ueda107]
gi|190686409|gb|ACE84087.1| amidase [Cellvibrio japonicus Ueda107]
Length = 393
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 215/419 (51%), Gaps = 31/419 (7%)
Query: 3 SRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
S D A+ +V PS S+ +L SGL +KD+F + G T GNPDW RTH
Sbjct: 2 SLDQRVFAWRGHYV-HPSPSSTRL--SGLRLGVKDLFHIAGLPTAAGNPDWLRTHPVPRQ 58
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+P V A+L+ GA IGKT DE+AYS+NG N HYG P NP P+R+PGGSSSGSAVAV
Sbjct: 59 TSPVVEALLAAGAQLIGKTQTDELAYSLNGLNSHYGAPRNPVTPERLPGGSSSGSAVAVA 118
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A+ +D LGTDTGGS+RVPASY G+ G R SH + + ++P+A +FDTVGW D + L
Sbjct: 119 AQEIDIGLGTDTGGSIRVPASYNGLLGIRTSHGIIPSDHMVPLAPAFDTVGWLTRDAQTL 178
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
VG VLL + V+ +P +V + +++ + Q L
Sbjct: 179 QAVGEVLLPPSLSVSARKPWRVSLLLPEMNGAALWTSAHQQWL----------------- 221
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
D P LQ F K+ LA S R+LQ YE HG W+ +P
Sbjct: 222 ------DSQPVLQVFKPLFVKQAW-----LARASETFRVLQGYEIWCTHGVWIQQQQPRF 270
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P I R + + + + ++ +L + ++V+PT PGP P L D +
Sbjct: 271 APDIQARFQWCSQLTQDQQQQAEQMRVQLCREIEHWFDQVDLVVMPTTPGPAPLLGADAA 330
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ +R + L S AG++ Q+ +P+ PV +SLL H SD LL + L N
Sbjct: 331 WMDAYRRQLMGLTSPAGLARLPQIHLPVLQQQGAPVGVSLLGPHRSDKALLQVATELMN 389
>gi|109898372|ref|YP_661627.1| amidase [Pseudoalteromonas atlantica T6c]
gi|109700653|gb|ABG40573.1| Amidase [Pseudoalteromonas atlantica T6c]
Length = 405
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 203/394 (51%), Gaps = 31/394 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G++ A+KD+F + G T GNPDW +H A T+PAV A+L GA+ +GKTI DE+A
Sbjct: 37 LNGVSLAVKDLFHIKGLPTTAGNPDWLASHPAPQQTSPAVNALLHAGASLVGKTITDELA 96
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+NG+N HYGTP N APDR+PGGSSSGSAVAV LGTDTGGS+RVPASY G+
Sbjct: 97 YSLNGQNIHYGTPFNISAPDRLPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 156
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN--LVRPSQVI 205
FG RP+H VS ++ +A SFDTVGW D L++V +VLL DD V+ +++
Sbjct: 157 FGLRPTHGRVSCEHMVSLAPSFDTVGWITRDLSTLDKVAQVLLNKDDDQTPCPVKDAKIG 216
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
FAE+ L SD + + V++ +
Sbjct: 217 FAEE-LAAQCEYSDTLGTAYNRMVKR----------------------------QCTLSS 247
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
S L S R+LQ YE HG W+T +KP P I ER + + +
Sbjct: 248 GLSSDLLTQASGTFRILQGYEIWQTHGQWITELKPTFAPDIQERFEWCATITEDQQQNAK 307
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ E + + L ++ +PT PG P + L +R +L IAG+ G Q
Sbjct: 308 KKQKEFISHIQHLFSQCDVIFLPTTPGAAPLINTPSEQLATYRNTLMNLTCIAGLCGLPQ 367
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ IPL ++ P+ SL+ + D L+ + L
Sbjct: 368 LHIPLAINPQAPIGFSLIGQKNHDKQLIEIARML 401
>gi|410621287|ref|ZP_11332136.1| amidase [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159291|dbj|GAC27510.1| amidase [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 403
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 202/394 (51%), Gaps = 27/394 (6%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
+PL + A+KD+FD+ G T GNPDW RTH ++T V +++ GA GKT+ DE
Sbjct: 32 IPLQNMKLAVKDLFDIKGIPTAAGNPDWLRTHPLPSNTNSTVASLIKHGAAYEGKTLTDE 91
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+AYS+NG+N HY T NP P+R+PGGSSSGSAVAV A+L D LGTDTGGS+RVPASY
Sbjct: 92 LAYSLNGQNIHYPTLINPVNPERLPGGSSSGSAVAVAAELADIGLGTDTGGSIRVPASYN 151
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+FG R SH + T ++ +A SFDT+GW + L +V +VLL + N V
Sbjct: 152 GLFGLRTSHGLIPTDNMVSLAPSFDTIGWMCRNIDDLEKVAKVLLP-KESANATTHETVK 210
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
F C+ + I + K VE L ++ V Q
Sbjct: 211 F---CIATNLISCSEQADHIEKMVEGLKSATALKLV-----------------------Q 244
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
E S +S R LQ +E HG+W+T P I +R + Q ++ +
Sbjct: 245 ENINTSTYKISDTFRTLQGFEIWQQHGEWITRTHPTFADDIQQRFDWCKTITLQDYNIAK 304
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ +++ L H ++++PT PG P L + L +R +IAG++G Q
Sbjct: 305 QQQQSFTKYINSRLQKHDVILLPTTPGRAPLLSTAANQLGEYRNNLIKFTAIAGLAGLPQ 364
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ +PL +N P ISL+A D L+N+ + L
Sbjct: 365 IHLPLFTINNAPCGISLIAPKNQDLRLINIAKKL 398
>gi|296446117|ref|ZP_06888065.1| Amidase [Methylosinus trichosporium OB3b]
gi|296256311|gb|EFH03390.1| Amidase [Methylosinus trichosporium OB3b]
Length = 397
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 204/389 (52%), Gaps = 30/389 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+ F +K DVDG V+ G+P WA TH A APAV +L+ GA +GK MDEM
Sbjct: 25 PLASARFVVKQNIDVDGVVSSNGHPTWAATHGPAPIAAPAVDRLLAAGAHLVGKAHMDEM 84
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N HYG P NP APDR PGGSSSGSAVAV A L DF+LGTDT GS R PAS+CG
Sbjct: 85 AYSLLGANAHYGAPLNPAAPDRHPGGSSSGSAVAVAAGLADFALGTDTAGSCRAPASFCG 144
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GFRPSH AVS+ GVIP+AQS DT+GWFA D +L RVG VLL
Sbjct: 145 VYGFRPSHGAVSSNGVIPLAQSLDTIGWFARDVDMLARVGAVLLP--------------- 189
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
ED L P +RV ++E+ F E ++ + + + + E ++
Sbjct: 190 -ED---LCDGPFERVV-----ALEEAFAQSDAETNEAARPAREALARM-YSVGEARLGED 239
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ SL R LQ +E + G W+ P GPG++ER A + +A + +
Sbjct: 240 FWSQSL----HCFRNLQAFEAWSAQGAWIERAAPRFGPGVAERFALAAKVTASEKAEADA 295
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+ R + +L + +LV+PT P P L L+ R F A G Q+
Sbjct: 296 FRRAARMRVDEILPPNAVLVVPTTPFVSPLLTESEEELDRKRYLMFRTFLFASFFGLPQI 355
Query: 387 SIPLGLHDNL-PVAISLLAKHGSDGFLLN 414
SIPL P+ ISL+ SD L+
Sbjct: 356 SIPLPRAPGAPPLGISLIGPRWSDRRLIE 384
>gi|119946077|ref|YP_943757.1| amidase [Psychromonas ingrahamii 37]
gi|119864681|gb|ABM04158.1| Amidase [Psychromonas ingrahamii 37]
Length = 398
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 215/397 (54%), Gaps = 37/397 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG TF KD+FDV G+VTG GNP W TH+ A T+P +LA+LS GA +G+ DE+A
Sbjct: 28 LSGYTFVFKDLFDVKGYVTGAGNPTWLETHNMAEQTSPLILALLSQGANCVGRVQSDELA 87
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+NG+N HYGTP NP AP+ +PGGSSSGSAVAV +K DFS+GTDTGGSVRVPASYCG+
Sbjct: 88 YSLNGQNIHYGTPVNPIAPNCLPGGSSSGSAVAVASKDADFSIGTDTGGSVRVPASYCGL 147
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR--PSQVI 205
+G RP+ + + +A+SFDT G F D ++++V VL + V+ +Q +
Sbjct: 148 YGLRPTLAKFNLEHCFELAKSFDTAGIFTRDLDLMHKVFEVL-----NGAPVKGESAQTL 202
Query: 206 FAEDCL--QLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ + L QLS R+ +++ L G + L
Sbjct: 203 YLDKTLAAQLSDQRLKRLQVCCIEAGITLLNGDFLAKYHL-------------------- 242
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
SL A+S R +Q YE H +W+ L P I +RV + SA++
Sbjct: 243 -------SLEAISLLFRTVQGYEIIAKHREWLAEFGHSLEPSIYQRVEWSRTISAEQYTQ 295
Query: 324 CQSVKTELRAALSALLGDH-GILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ +T+ R L+ LL G+ ++PT P PP L + L +R+ L SIAG+SG
Sbjct: 296 AKKRQTDFRLQLTVLLQQQGGLWLVPTTPSGPPSLSLAGDQLAKYRSNLMGLTSIAGLSG 355
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
F Q+ +P+ + P ISLL S+G L + L
Sbjct: 356 FPQLHLPIKGLEEGPCGISLLGLPDSEGDLFATAQQL 392
>gi|410648703|ref|ZP_11359106.1| amidase [Glaciecola agarilytica NO2]
gi|410131712|dbj|GAC07505.1| amidase [Glaciecola agarilytica NO2]
Length = 404
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 213/411 (51%), Gaps = 37/411 (9%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P+ A L LSG++ A+KD+F + G T GNPDW +H TAPAV +L GA +
Sbjct: 24 PAKQADNLMLSGVSLAVKDLFHIKGLPTTAGNPDWLASHPIPVHTAPAVETLLENGARLV 83
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKTI DE+AYS+NG+N HYGTP N APDR+PGGSSSGSAVAV LGTDTGGS+
Sbjct: 84 GKTITDELAYSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSI 143
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDV 196
RVPASY G+FG RP+H +S+ ++ +A SFDTVGW D +L +V V + DD
Sbjct: 144 RVPASYNGLFGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFFGDKHIDDA 203
Query: 197 ----NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP 252
++ + S++ FA++ + S+ +T VE I+E+ + D
Sbjct: 204 SNSQDIAQNSKIGFAQELARQCEY-SEALTTAYHSMVEDPC---ILESGLSSD------- 252
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VW 311
SL S R+LQ YE HG+W+T P P I +R W
Sbjct: 253 ------------------SLIEASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRFAW 294
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARA 371
A + Q+ + + + + ++ L ++ +PT PGP P + L +R
Sbjct: 295 CATIDNQQRQQALEK-QAKFISHINHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTL 353
Query: 372 FSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
L IAG+ G Q+ +PL ++ + P+ SL+ + D L+ + L T
Sbjct: 354 MKLTCIAGLCGLPQLHVPLPINPHAPMGFSLIGQKNHDKQLIEIARMLLET 404
>gi|410643240|ref|ZP_11353739.1| amidase [Glaciecola chathamensis S18K6]
gi|410137070|dbj|GAC11926.1| amidase [Glaciecola chathamensis S18K6]
Length = 404
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 213/411 (51%), Gaps = 37/411 (9%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P+ A L LSG++ A+KD+F + G T GNPDW +H TAPAV +L GA +
Sbjct: 24 PAKQADNLMLSGVSLAVKDLFHIKGLPTTAGNPDWLASHPIPIHTAPAVETLLENGARLV 83
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKTI DE+AYS+NG+N HYGTP N APDR+PGGSSSGSAVAV LGTDTGGS+
Sbjct: 84 GKTITDELAYSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSI 143
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDV 196
RVPASY G+FG RP+H +S+ ++ +A SFDTVGW D +L +V V + DD
Sbjct: 144 RVPASYNGLFGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFFGDKHIDDA 203
Query: 197 ----NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP 252
++ + S++ FA++ + S+ +T VE I+E+ + D
Sbjct: 204 SNSQDIAQNSKIGFAQELARQCEY-SEALTTAYHSMVEDPC---ILESGLSSD------- 252
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VW 311
SL S R+LQ YE HG+W+T P P I +R W
Sbjct: 253 ------------------SLIEASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRFAW 294
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARA 371
A + Q+ + + + + ++ L ++ +PT PGP P + L +R
Sbjct: 295 CATIDNQQRQQALEK-QAKFISHINHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTL 353
Query: 372 FSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
L IAG+ G Q+ +PL ++ + P+ SL+ + D L+ + L T
Sbjct: 354 MKLTCIAGLCGLPQLHVPLPINPHAPMGFSLIGQKNHDKQLIEIARMLLET 404
>gi|381166975|ref|ZP_09876188.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Phaeospirillum molischianum DSM 120]
gi|380684027|emb|CCG41000.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Phaeospirillum molischianum DSM 120]
Length = 409
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 207/395 (52%), Gaps = 35/395 (8%)
Query: 23 AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
A Q PL+GLTFA KD+FD+ G+VTG GNPDW R A TA AV A+L GA +GKT
Sbjct: 37 ARQGPLAGLTFAAKDVFDIAGYVTGAGNPDWRRLAEPARQTAWAVSALLESGARLVGKTH 96
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
DE+ I G+N HYGTP NP AP VPGGSSSGSAVAV L D +LGTDT GS RVPA
Sbjct: 97 TDELTRGIFGDNSHYGTPENPRAPGHVPGGSSSGSAVAVAGGLADMALGTDTAGSTRVPA 156
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
S+CG+FG RP+ + GV+ + +FDTVG A DP +L R+G VLL+ V P+
Sbjct: 157 SFCGVFGLRPTLGLIPMDGVLGQSNTFDTVGLLAADPDVLARMGEVLLR--KKVGNQHPA 214
Query: 203 QVIFAEDCLQLS----SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
+ + ED ++ + + + V + ++V + G I V L D+++ +
Sbjct: 215 RAVVLEDTMEAADPEVAAAIEAVLPRIAETVAPVVRGTRISPVPLPDWIEPQ-------- 266
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
+Q E GDW+ P G +++ R +
Sbjct: 267 ---------------------NAIQGREAWEVFGDWINRSNPRFGFEVADNFLRGSRVAN 305
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ + + + R + L H +LV+PT P P +Q S + R+R SL +IA
Sbjct: 306 RTLSSSRGFRLRARRWVLDALEGHAVLVLPTTPVTAPPVQSPRSEMWDIRSRIISLTTIA 365
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
G++G Q+S+PL + PV +SL+ G D LL
Sbjct: 366 GMAGCPQISLPLCTVNGRPVGVSLIGPRGGDSLLL 400
>gi|409408484|ref|ZP_11256919.1| Amidase [Herbaspirillum sp. GW103]
gi|386431806|gb|EIJ44634.1| Amidase [Herbaspirillum sp. GW103]
Length = 396
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/405 (40%), Positives = 227/405 (56%), Gaps = 29/405 (7%)
Query: 15 FVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGG 74
FV QP +S+ PL+G+ A+KDIFDV G+ TG GNP T +APAV A+L G
Sbjct: 16 FVPQPHASSG--PLAGVRLAVKDIFDVAGYPTGCGNPHMLALSGIKTDSAPAVQALLQAG 73
Query: 75 ATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDT 134
A +GK DE+A+S+NG+N H+GTP N APDR+PGGSSSGSA AV L D +LGTDT
Sbjct: 74 AQFVGKVYTDELAFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADLALGTDT 133
Query: 135 GGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD 194
GGSVRVPAS+CG+ G RP+H V V+ +A SFDT GWFA D + +R G VLL D
Sbjct: 134 GGSVRVPASHCGLIGLRPTHGRVWLERVMELAGSFDTCGWFARDMDVFSRAGAVLLG-ED 192
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
L +V+ A D L L L V+ FG L D + + +
Sbjct: 193 SAPLPAQPRVLVAADVLAL-----------LAPRVQAQFGQ-------LLDRLDGVLGTP 234
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV 314
Q + G PS AL A R +Q YE HG+ ++ LGPG++ER +
Sbjct: 235 QPVKAAG--------PSFDALYWAFRHIQGYEAWRAHGENISRHGFQLGPGVAERFAWSS 286
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
+ Q+++ +V+ R + + LLG G+L++P+ P P L +LE +R +A +
Sbjct: 287 TITPQQMEEHSAVRRTFRESFTRLLGQDGVLLLPSAPDVAPLLTDSEQSLEDYRNQAVRM 346
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
L ++G+SGF Q+S+PL D P +SL+A GSD L++ L
Sbjct: 347 LCLSGLSGFPQISLPLMQLDGAPFGLSLIAPPGSDRSLISYAAGL 391
>gi|168046070|ref|XP_001775498.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673168|gb|EDQ59695.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 306
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 188/310 (60%), Gaps = 15/310 (4%)
Query: 39 FDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYG 98
FDV+ +TGFG+PDW +H A TAP ++ + GAT IGKTIMDEM + + G N+ G
Sbjct: 1 FDVEKKITGFGSPDWENSHEPAIKTAPVLVKLRKAGATCIGKTIMDEMGFCLLGANRWLG 60
Query: 99 TPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVS 158
TP NP + R+ GGSSSG+AV+VG+K+VDF++G DT G VRVPA+ CG+ GFR SH A+S
Sbjct: 61 TPENPFSTSRICGGSSSGAAVSVGSKVVDFAIGIDTVGDVRVPAACCGVLGFRSSHGAIS 120
Query: 159 TAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL--VRPSQVIFAEDCLQLSSI 216
G IP+A SFD VGWFA + +L VGR QL V + P + A D +LS++
Sbjct: 121 LEGTIPVASSFDAVGWFARNAGLLRLVGR---QLCPHVVMDGKGPKRFYMAHDVFKLSAV 177
Query: 217 PSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE----GNKEQEYSIPSL 272
R L +SV++ G H + N+ +Y++D P++Q F E G +Y+ +L
Sbjct: 178 SHLRTADVLARSVQRTVGRHTLCNLNFIEYLEDHAPAIQTFKKELERMGLDSSQYT--AL 235
Query: 273 AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV---RTSAQKIDVCQSVKT 329
L +M L QR+EFK NHG+W+ KP L + RV +AV + A ++ Q V+
Sbjct: 236 DVLRESMLLFQRHEFKGNHGEWIAKAKPYLTRTVESRVHKAVLLPDSEALRVIAIQ-VRE 294
Query: 330 ELRAALSALL 339
E+ + ++ LL
Sbjct: 295 EISSLMNNLL 304
>gi|409407551|ref|ZP_11256002.1| hypothetical protein GWL_31560 [Herbaspirillum sp. GW103]
gi|386433302|gb|EIJ46128.1| hypothetical protein GWL_31560 [Herbaspirillum sp. GW103]
Length = 412
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 227/422 (53%), Gaps = 33/422 (7%)
Query: 5 DSDYGAFME--KFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D AF+ +F L ++S PL+GL FA KD+FDV GH TG GNPDW R+H
Sbjct: 19 DDHVAAFVPHGRFTLAGAASG---PLAGLRFAAKDLFDVAGHPTGAGNPDWLRSHPIPMR 75
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
+ V +L GAT +GKT+ DE+AYSI+G+N HYGTP N APDRVPGGSSSGSA AV
Sbjct: 76 SNALVGQLLQAGATLVGKTLTDELAYSIHGDNHHYGTPVNSAAPDRVPGGSSSGSAAAVA 135
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
A+L DF+LGTDTGGS RVPASYCG++G R S +STA + P+ SFDT W A DP
Sbjct: 136 ARLCDFALGTDTGGSTRVPASYCGVWGLRTSFGLLSTASMAPLCPSFDTATWLAHDPDTF 195
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
RVG+VLL + + +V+ D L+L+ V Q +
Sbjct: 196 ERVGQVLLPKTGSLQV---RKVLLPFDLLELAEPEFQPVVQRVY---------------- 236
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
D ++ ++P +H G +E E +A + ++ ++ HG W+++ +P
Sbjct: 237 --DALRSELPG-EHMRMSG-EEGELEKWRMAYIKASA-----FDAWQCHGAWISSARPVF 287
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
G + R A SA + + +R + +LLG G+ V+P+ P +
Sbjct: 288 GSAVQARWDMAQHISADTARAAREKQDLVRHRVRSLLGADGVAVMPSASSVAPLRDASAA 347
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
A++ RAR F L +AG++G QVS+P LP+ +SLL GSD L+ L L
Sbjct: 348 AIDEVRARTFGLTCVAGLAGLPQVSMPFTTPAGLPIGVSLLGPAGSDLALIGLATRLWRN 407
Query: 423 LK 424
L+
Sbjct: 408 LQ 409
>gi|423683871|ref|ZP_17658710.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
licheniformis WX-02]
gi|383440645|gb|EID48420.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
licheniformis WX-02]
Length = 392
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 229/418 (54%), Gaps = 40/418 (9%)
Query: 5 DSDYGAFMEK-FVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
+ D+ AF+ + + P S+ + L L+FA+KD+F V+GH GNPDW RTH A
Sbjct: 2 EHDWSAFINRDLTVDPPSA--EGSLKKLSFAVKDVFAVEGHANAAGNPDWLRTHEPAEKN 59
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
A AV +L GA G DE+ YS++GEN HYGTP NPCA D++PGGSSSGSAVA +
Sbjct: 60 AEAVDLLLREGARLKGAAHTDELMYSLDGENVHYGTPVNPCAMDKIPGGSSSGSAVAAAS 119
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
+ DF+LGTDTGGSVR+P+SYCGIFGFRP+H VS GVIP+A+SFDTVGW + D +L+
Sbjct: 120 GMTDFALGTDTGGSVRIPSSYCGIFGFRPTHGEVSVDGVIPLAKSFDTVGWMSKDIGVLH 179
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
GRVLL ++ ++V F ++ L SDR TQ ++ +I
Sbjct: 180 AAGRVLLSGQEEAGACF-NRVYFEKEAWSLLE-ESDR-TQVYAYAL----------GLID 226
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPS---LAALSSAMRLLQRYEFKNNHGDWVTTVKP 300
G++ ++ + + LA + R+LQ E HG W+ P
Sbjct: 227 GEF-------------------DWCVAADGGLAEWAETFRVLQGLEIWEEHGAWIERTNP 267
Query: 301 DLGPGISERV-WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
GPGI+ER W + + + + R LS LG+ G+LVIPT PGPPP +
Sbjct: 268 VFGPGIAERFEWASSLVISDHVQAFMK-REAARKRLSEWLGEDGLLVIPTAPGPPPLRGL 326
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
+ L RAR L IAG+ G Q+++PL + P+ +S +A D LL E
Sbjct: 327 PENELNERRARTMKLTCIAGLGGLPQITVPLPAKNGEPLGLSFIAGCKQDLKLLAWTE 384
>gi|260770441|ref|ZP_05879374.1| amidase [Vibrio furnissii CIP 102972]
gi|260615779|gb|EEX40965.1| amidase [Vibrio furnissii CIP 102972]
Length = 393
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 215/399 (53%), Gaps = 31/399 (7%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q LSG F KD+FDV+G+ TG GNP W +TH AT+T+P + A+L GA +G+ D
Sbjct: 21 QGTLSGTRFVFKDLFDVEGYATGAGNPTWLKTHQMATATSPLITALLGQGAECVGRVQTD 80
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+AYS+NG+N HYGTP NP AP+ +PGGSSSGSAVAV DF++GTDTGGS+RVPASY
Sbjct: 81 ELAYSLNGQNSHYGTPINPKAPNCIPGGSSSGSAVAVAKNDCDFAIGTDTGGSIRVPASY 140
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+FG RP+ + + +A+SFDT G F D +++ V VL +A + R ++V
Sbjct: 141 CGLFGLRPTLGTLDLSHCFELAKSFDTAGIFTRDLRLMRDVWSVL--VARHQSGERVTRV 198
Query: 205 IFAEDCLQ-LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
C +S+ +R++Q ++ G II+ +L
Sbjct: 199 YLDAQCQAVMSAARLERLSQQCQRA-----GIEIIQGNVLA------------------- 234
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ +S+ L+ L R +Q +E +H W+T L P I ERV A + ++ D
Sbjct: 235 QNGWSLTDLSLL---FRTIQGFEIIEHHDAWLTQYGDSLDPAIGERVEWARTITCEQYDH 291
Query: 324 CQSVKTELRAA-LSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + + + L+ L + IPT P PP L M L V+R++ L SIAG+SG
Sbjct: 292 AKGRQQDFQQQILTHLKQQRCLWAIPTTPSGPPSLTMPAGELAVYRSQLMGLTSIAGLSG 351
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
Q+ +P+ P ISL+ + LL E ++N
Sbjct: 352 LPQLHLPMEELLEGPCGISLMGLPHQEETLLVTGEAVYN 390
>gi|333909465|ref|YP_004483051.1| Amidase [Marinomonas posidonica IVIA-Po-181]
gi|333479471|gb|AEF56132.1| Amidase [Marinomonas posidonica IVIA-Po-181]
Length = 397
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 215/422 (50%), Gaps = 53/422 (12%)
Query: 15 FVLQPSS-------SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
F+ QP S SA L+GL A+KD+F + G T GNP W TH STAP+V
Sbjct: 10 FLSQPESVSSDSLKSASLGQLTGLRLAVKDLFHMQGLPTTAGNPTWLATHPTPNSTAPSV 69
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+ +++ GA +GKTI DE+AYS+NG+N HYGTP NP P+R+PGGS+SGSAVAV L D
Sbjct: 70 VTLMANGAEFVGKTITDELAYSLNGQNIHYGTPENPVTPNRLPGGSTSGSAVAVSLGLAD 129
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
LGTDTGGS+RVPASY G+FG RP+H A+S ++ +A SFDTVGW +L + +
Sbjct: 130 IGLGTDTGGSIRVPASYQGLFGLRPTHGAISAEHLVALAPSFDTVGWVTKHLDVLEKTAQ 189
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
VLL L+ D + ++ V L + V +++V+
Sbjct: 190 VLLPLS-------------TSDWSKNNTFKRVLVVDNLFRQVAH---QQALQDVLAAWRH 233
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
K+ S + F+ + +K Q S+ R LQ E + HG W+ V PD I
Sbjct: 234 DGKLSSEERFVIDTDKWQT---------SATFRTLQGREIQREHGQWIAEVDPDFATDI- 283
Query: 308 ERVWEAVRTSAQKIDVCQ-------SVKTELRAALSALLGDH---GILVIPTVPGPPPKL 357
AQ+ D CQ S RA + L D +L++PT PG P
Sbjct: 284 ----------AQRFDWCQTLSEADESAALRQRALFTEWLTDALDGAVLLLPTTPGLAPLF 333
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
L +R + L +IAG++G Q+ +P+ + P +SL+ GSD L+ +
Sbjct: 334 SASEEDLAEYRHQLMDLTAIAGLAGLPQLHLPVCELEGAPCGLSLVGPKGSDLALIEYAK 393
Query: 418 TL 419
+L
Sbjct: 394 SL 395
>gi|410628301|ref|ZP_11339024.1| amidase [Glaciecola mesophila KMM 241]
gi|410152165|dbj|GAC25793.1| amidase [Glaciecola mesophila KMM 241]
Length = 401
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 206/394 (52%), Gaps = 31/394 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G++ A+KD+F + G T GNPDW +H T+PAV A+L GA+ +GKTI DE+A
Sbjct: 33 LNGVSLAVKDLFHIKGIPTTAGNPDWLASHPTPEQTSPAVDALLHAGASLVGKTITDELA 92
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+NG+N HYGTP N AP+R+PGGSSSGSAVAV LGTDTGGS+RVPASY G+
Sbjct: 93 YSLNGQNIHYGTPFNISAPERLPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 152
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN--LVRPSQVI 205
FG RP+H +S ++ +A SFDTVGW D L++V +VLL D+ V+ +++
Sbjct: 153 FGLRPTHGRISCEHMVSLAPSFDTVGWITRDLSTLDKVAQVLLNKDDEQTPYPVKDAKIG 212
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
FAE+ L SD ++ K V++ +
Sbjct: 213 FAEE-LAAQCEYSDALSSAYNKMVKR------------------------QCILSSGLSS 247
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ I + S R+LQ YE HG W+T KP P I ER + ++ +
Sbjct: 248 DLLIQA----SGTFRILQGYEIWQTHGQWITKQKPTFAPDIQERFEWCATITEKQQQNAK 303
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ E + + L ++ +PT PG P + L +R + +L IAG+ G Q
Sbjct: 304 KKQKEFISHIHYLFSQCDVIFLPTTPGAAPLINTPSEQLATYRNKLMNLTCIAGLCGLPQ 363
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ IPL ++ + P+ SL+ + D L+ + L
Sbjct: 364 LHIPLAINPHAPMGFSLIGQKNHDKQLIEIARML 397
>gi|88798441|ref|ZP_01114026.1| amidase [Reinekea blandensis MED297]
gi|88778881|gb|EAR10071.1| amidase [Reinekea sp. MED297]
Length = 404
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 215/397 (54%), Gaps = 35/397 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A+KD+F V G+ GNPDW RTH AT TA AV ++ G+ G T DE+A
Sbjct: 30 LAGVRLAVKDLFAVAGYTNTAGNPDWLRTHGPATKTADAVQRLMDAGSVFCGFTQTDELA 89
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y++ G N+H+G NP P GGSS GSA AVG++ D LGTDTGGS+RVPASYCG+
Sbjct: 90 YALEGNNEHFGKSENPKLPGHACGGSSMGSAAAVGSRWADVGLGTDTGGSIRVPASYCGL 149
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RPSH VST G+I +A FDTVGWFA D +L +VG VLL AD RP +
Sbjct: 150 YGLRPSHGVVSTDGLIGLAPRFDTVGWFAGDAALLRQVGEVLLP-AD-----RP---VGK 200
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L S+ ++Q L E L + + + + G + + + L +Q +
Sbjct: 201 PDTL---SVDPYLMSQALGHCGEAL---NTVIDRLSGVFGQTRTVDL-------GLQQRF 247
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
A L+ R+LQ + HGDW+ +P I+ER+ A+ + +++ +S
Sbjct: 248 -----ANLNDVFRVLQGRAIAHYHGDWLNATQPTFSKPITERLRMALALTDAEVEQAESQ 302
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ A + LGD G+L++PT P PKL D S L R + +L +I+G++G QV
Sbjct: 303 RQAFHAHVQEQLGDDGVLLLPTTPSTAPKLGEDTSEL---RPKLLTLTAISGLTGSAQVH 359
Query: 388 IPL-----GLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+PL H + P SLL G D LL L E +
Sbjct: 360 LPLMPLARKHHPSRPYGFSLLMPSGQDHTLLRLSEAV 396
>gi|375132337|ref|YP_005048745.1| amidase [Vibrio furnissii NCTC 11218]
gi|315181512|gb|ADT88425.1| Amidase [Vibrio furnissii NCTC 11218]
Length = 393
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 214/399 (53%), Gaps = 31/399 (7%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q LSG F KD+FDV+G+ TG GNP W +TH AT+T+P + A+L GA +G+ D
Sbjct: 21 QGTLSGTRFVFKDLFDVEGYATGAGNPTWLKTHQIATATSPLITALLGQGAECVGRVQTD 80
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+AYS+NG+N HYGTP NP AP+ +PGGSSSGSAVAV + DF++GTDTGGS+RVPASY
Sbjct: 81 ELAYSLNGQNSHYGTPINPKAPNCIPGGSSSGSAVAVANEECDFAIGTDTGGSIRVPASY 140
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+FG RP+ + + +A+SFDT G F D +++ V VL +A + R ++V
Sbjct: 141 CGLFGLRPTLGTLDLSHCFELAKSFDTAGIFTRDLRLMRDVWSVL--VARRQSGERVTRV 198
Query: 205 IFAEDCLQ-LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
C +S+ + ++Q ++ ++ GHI+
Sbjct: 199 YLDAQCQAVMSAARLECLSQQCQRAGIEIIQGHIL------------------------A 234
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ +S+ L+ L R +Q +E +H W+T L P I ERV A + ++ D
Sbjct: 235 QNGWSLTDLSLL---FRTIQGFEIIEHHDMWLTQYGDSLDPSIGERVEWARTITCEQYDH 291
Query: 324 CQSVKTELRAA-LSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + + + L+ L + IPT P PP L M L V+R++ L SIAG+SG
Sbjct: 292 AKGRQQDFQQQILTHLKQQRCLWAIPTTPSGPPSLTMPADELAVYRSQLMGLTSIAGLSG 351
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
Q+ + + P ISL+ + LL E +HN
Sbjct: 352 LPQLHLSMEELLEGPCGISLMGLPHQEETLLVTGEAVHN 390
>gi|303280153|ref|XP_003059369.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459205|gb|EEH56501.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 432
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 208/409 (50%), Gaps = 45/409 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA--ATSTAPAVLAVLSGGATSIGKTIMDE 85
LSGLTFA+KD D+ GH TG GNPDW RT A + AP V A+L GAT +GKT MDE
Sbjct: 55 LSGLTFAVKDNLDLAGHRTGCGNPDWLRTRGGTPAATHAPCVAAMLDAGATCVGKTQMDE 114
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+A+S+ GEN HYGTP+NP P RVPGGSSSGSA AV A VD +LGTDT GSVRVPASY
Sbjct: 115 LAWSLQGENAHYGTPSNPADPSRVPGGSSSGSACAVAAAHVDVALGTDTAGSVRVPASYV 174
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G++GFRPSH V G + +A+SFD VGWFA D L G LL RPS I
Sbjct: 175 GVYGFRPSHGRVPVDGCVALARSFDCVGWFARDAATLMACGAALLPPD------RPSGTI 228
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A+ +L + +D + E L + +++ G +
Sbjct: 229 HADGFKRL-IVATDAFATCDAGTREAL------------------ISAIERAAKAGGDLE 269
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV---WEAVRTSAQKID 322
A + R LQ E HG W+ P GPG++ER + I
Sbjct: 270 P-------AWWDSFRTLQTREVWLEHGAWIEETDPSFGPGVAERFAAAEAGGGAATDAIA 322
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + + L+A+L G++V+P+ P P K A E FRAR L + AG++G
Sbjct: 323 AANAARDAITRRLNAMLEGGGVIVLPSAPSPALKTGASAEATEAFRARQLRLTTAAGMAG 382
Query: 383 FCQ--------VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
Q VSIP D PV +S +A G D LL L +L L
Sbjct: 383 LPQARRFGRRIVSIPAATADGAPVGLSFIAARGRDEELLALTVSLERAL 431
>gi|323137392|ref|ZP_08072470.1| Amidase [Methylocystis sp. ATCC 49242]
gi|322397379|gb|EFX99902.1| Amidase [Methylocystis sp. ATCC 49242]
Length = 389
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 208/402 (51%), Gaps = 39/402 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G TFA+K+ DV G V+ G+P WA TH+AA + AP V +L+ GA +GKT MDEM
Sbjct: 21 PLTGATFAVKENIDVAGQVSTNGHPQWAATHAAAHANAPVVDRLLAAGARLVGKTHMDEM 80
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N H+GTP NP A +R PGGSSSGSAVAV A LV F+LGTDT GS R PA++CG
Sbjct: 81 AYSLLGANPHFGTPINPAAQNRHPGGSSSGSAVAVAAGLVSFALGTDTAGSCRAPAAFCG 140
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFGFR SH A+ GVIP+A S D +GWFA D + VG VLL D R + +
Sbjct: 141 IFGFRSSHGAIPIDGVIPLAPSLDVIGWFARDLDRMVDVGDVLLPADSDDGEFR--EAVL 198
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS----EGN 262
D H +E ++ P++ S EG
Sbjct: 199 LSDAF------------------------HGVET----EFAASAAPAIDQLKSAPWREGR 230
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+ E+ +LA R LQ +E +HG W+ P G G+ ER+ A + + ++
Sbjct: 231 LDDEFFKTALAHF----RNLQAHEAWTSHGGWIAAHHPTFGKGVEERLAIASKVTLEQKR 286
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
++ E R + A+LGD G +V PT P P L L+ R + L IA G
Sbjct: 287 AAEAFGAEARKKVDAMLGDDGFIVSPTTPFRAPLLADSDEQLDAKRYQMMRLFLIASYFG 346
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
Q+++PL D PV +S + + GSD LL +K
Sbjct: 347 LPQIALPLPSSDA-PVGLSFIGRRGSDRKLLAFARRFCAKMK 387
>gi|420248045|ref|ZP_14751419.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398069433|gb|EJL60788.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 400
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 203/398 (51%), Gaps = 33/398 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL A+KD+FD+ G TG GN W A TA AV +L GA IGKT+ DE+
Sbjct: 35 LAGLRLAVKDVFDIAGLRTGSGNLAWRDQQPVAARTALAVRGLLEEGAQWIGKTVTDELT 94
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP P R+PGGSSSGS VAV A D +LGTD GGSVR+PASYCG+
Sbjct: 95 YSLAGVNAHYGTPVNPADPARIPGGSSSGSVVAVAAGHADIALGTDCGGSVRLPASYCGV 154
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H ++T G + +A SFDTVGWFA D + L + VL + V+ A
Sbjct: 155 WGMRPTHGRIATDGCLTLAHSFDTVGWFARDGRTLADIFEVLAR-----------SVVMA 203
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV-ILGDYVKDKVPSLQHFLSEGNKEQE 266
D +P + L+ V+ ++ +LGD V P
Sbjct: 204 GDGPFALHVPRN-----LLACVDAQVAARFEASLQVLGDVVTFVAPE------------- 245
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
SLA + A R LQ E +G W GP + R ++ + ++I Q
Sbjct: 246 ---ASLADWAQAFRALQAAEIAQRYGPWAREHAASFGPDVGARFAMSLTITPEQIADAQR 302
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+ E A++ L ++PTVPG P+ ++ RAR+ +L +AG++G QV
Sbjct: 303 VRVEAIRAMADALPQGSYWLVPTVPGVAPRADASAQTVDNTRARSQQMLCVAGLAGLPQV 362
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
++P D PV +SL+ G+D +L +H ++
Sbjct: 363 NMPWMSFDGAPVGLSLIGARGADEGVLRTARAVHEAMR 400
>gi|170694812|ref|ZP_02885962.1| Amidase [Burkholderia graminis C4D1M]
gi|170140172|gb|EDT08350.1| Amidase [Burkholderia graminis C4D1M]
Length = 405
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 204/400 (51%), Gaps = 35/400 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G A+KD+FDV G TG GN W AT TA AV A+L GA +GKT+ DE+
Sbjct: 36 LVGERLAVKDVFDVAGLRTGSGNLAWRDEQPVATRTALAVRALLEEGAQWLGKTVTDELT 95
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP P R+PGGSSSGS VAV A D +LGTD GGSVR+PASYCG+
Sbjct: 96 YSLAGVNAHYGTPVNPSDPARIPGGSSSGSVVAVAAGHADIALGTDCGGSVRLPASYCGV 155
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H ++ G + +A SFDTVGWFA D ++L VL +
Sbjct: 156 WGMRPTHGRIAADGCLTLAHSFDTVGWFARDARLLADTFEVLAR---------------- 199
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
S +P+D+ F H+ N +L D + L + +
Sbjct: 200 ------SLVPADQAA----------FALHVPRN-LLACVDPDVAARFEASLPALGERARF 242
Query: 268 SIP--SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
P SLA + A R+LQ E +G W G + R ++ + ++I Q
Sbjct: 243 VAPEASLADWAQAFRVLQAAEIAQRYGQWAREHAASFGADVGARFAMSLGITREQIADAQ 302
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
++ E A++ L + ++PTVPG P+ L+ RAR+ +L AG++G Q
Sbjct: 303 RIRAEAIRAMAHALPERTYWLVPTVPGVAPRADASAQTLDHVRARSQQMLCAAGLAGLPQ 362
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
VS+P D +PV +S++ G+D +L +H+ +++
Sbjct: 363 VSMPWTRFDGVPVGLSVIGARGADEGVLAAARAVHDVMRD 402
>gi|145589367|ref|YP_001155964.1| amidase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047773|gb|ABP34400.1| Amidase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 392
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 223/389 (57%), Gaps = 33/389 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL LTF +KDIFD+ T FG+P W +H T TA + +++ GA+ +GKT DE+
Sbjct: 28 PLKDLTFGVKDIFDIANIPTAFGSPAWLNSHPIPTETATFISSLVDAGASLVGKTHTDEL 87
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
YSI G N HYGTP N AP+RVPGGSSSGSA AV A LVDF++G+DTGGSVR PAS+CG
Sbjct: 88 TYSILGMNAHYGTPLNTVAPNRVPGGSSSGSASAVAANLVDFAIGSDTGGSVRAPASFCG 147
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+GFRP+H +S P+A+SFDT+GWFA DP+IL +VG VL + N + F
Sbjct: 148 IYGFRPTHGRISLERARPLAKSFDTLGWFARDPEILLKVGEVLFNESRTRNA--SASYFF 205
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
++ L + L K ++ ++ LG + ++P+++ GN E
Sbjct: 206 LKEAFDL-------LPPSLSKQAQEAI------SLRLG---RTQIPTVEI----GNCE-- 243
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR--TSAQKIDVC 324
L + R++Q E HG+W + ++GPG+ +R +EA R T QKI
Sbjct: 244 -----LKDWAETFRIIQAGEIWEQHGNWASEHLSEMGPGVKDR-FEAARSITEDQKIK-A 296
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+S + ++ A ++ LL ++ L++PTV P+L + FR +F LL IAG+ G
Sbjct: 297 RSDREKVIAKMAQLLSENTYLILPTVFDIAPRLDSSAKEFDDFRKNSFQLLCIAGLCGLP 356
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
QV++PL + P +S+LAK D LL
Sbjct: 357 QVTLPLLTIQDAPFGVSILAKQNMDMSLL 385
>gi|152981287|ref|YP_001352460.1| amidase [Janthinobacterium sp. Marseille]
gi|151281364|gb|ABR89774.1| amidase [Janthinobacterium sp. Marseille]
Length = 408
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 209/398 (52%), Gaps = 41/398 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ FA+KD+FD+ G TG GNP W + AA A AV +LS GA +GKT+ DE+
Sbjct: 42 LEGVRFAVKDVFDIAGTRTGAGNPVWLSGNPAANKHAAAVERLLSDGARFVGKTLTDELT 101
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG P NP +PDR+PGGSSSGS AV A L D +LGTD GGSVR+PASYCG+
Sbjct: 102 YSLAGINAHYGVPRNPASPDRLPGGSSSGSVAAVAAGLADIALGTDCGGSVRLPASYCGV 161
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H +S G + +A SFDTVGWFA L + + LA P+ +
Sbjct: 162 WGMRPTHGRLSGHGCLTLAHSFDTVGWFA---DTLEHLEQTFCALAHAETTSMPATFLTL 218
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D S I N +L V D L+ N++ ++
Sbjct: 219 ND----SGI-----------------------NGLLDPAVFDAFSKLK------NEQSDF 245
Query: 268 ----SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
S LA+ ++A R+LQ E HG WVT +LG I +R A +A ++
Sbjct: 246 LAVDSELELASWAAAFRILQASEAWMEHGLWVTQHADELGVDIRQRFNIAAGVTATQVRT 305
Query: 324 CQSVKTELRAALSALL-GDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
Q V+ L+ +L H ++V+PTVP P P L D + ++ R R+ LL IAG++G
Sbjct: 306 AQEVRIAAIRELNRILDSQHKVIVLPTVPTPAPLLTADSATVDDVRMRSQHLLCIAGLAG 365
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
Q+S+P + PV +S++ G D +L+ L
Sbjct: 366 LPQLSMPWIQVNGAPVGLSIIGGRGCDEIVLHAAHKLQ 403
>gi|424014997|emb|CCM43858.1| amidase family protein [Janthinobacterium agaricidamnosum]
Length = 430
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 213/417 (51%), Gaps = 31/417 (7%)
Query: 9 GAFM-EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
GAF+ E F + P + + L GL A KD+F + G G GNP W A+ +A A+
Sbjct: 41 GAFVSEGFGIAPPVAIYSDELGGLRLAAKDVFALAGQRIGAGNPAWLAGQQPASGSALAI 100
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+L GA +GKT+ DE+A+S+ G N+HYGTP NP +P R+PGGSSSGSAVAV A D
Sbjct: 101 ELLLGAGAAWVGKTVTDELAFSLMGINRHYGTPVNPASPLRLPGGSSSGSAVAVAAGHAD 160
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
+LGTD GGS R+PASYCGI+G RP+ ++ G +A SFDTVGWFA D L V +
Sbjct: 161 IALGTDCGGSCRLPASYCGIWGIRPTQGVIAKNGCFALAHSFDTVGWFAADGASLGAVFK 220
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
VL Q Q I ++ L SD G +V + F + + + +
Sbjct: 221 VLAQ-----------QEIPSKHAAVLHI--SDDALAGCSPAVNRAFEAALAD--LAARFD 265
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
K VPS +P A A R+LQ E HG WVT LG +
Sbjct: 266 KRHVPS-----------GRLPLPPWA---QAHRVLQSAEIWQQHGAWVTAHGDSLGSDVR 311
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALL-GDHGILVIPTVPGPPPKLQMDPSALEV 366
R A + Q + Q V+ + L+ALL G H L++PT P P + L+
Sbjct: 312 RRFDNAAAVTRQDVSSQQIVRIQAMTTLTALLPGLHDFLLLPTAPDIAPLCDASDATLDH 371
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
R A LL IAG++G QVS+P D PV +SL+ G+D L+ + +H TL
Sbjct: 372 HRINAQHLLCIAGLAGLPQVSMPWIQIDGAPVGLSLIGCRGNDAGLIAAAQAVHATL 428
>gi|351731780|ref|ZP_08949471.1| amidase [Acidovorax radicis N35]
Length = 394
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 209/394 (53%), Gaps = 29/394 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGL FA KD+FDV G+ TG GNP T TAP V +L GA +GKT+ DE+
Sbjct: 25 PLSGLCFAAKDLFDVAGYPTGGGNPVVLALSGTKTRTAPTVQKLLDAGARFVGKTVTDEL 84
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+NG N H+G P N APDR+ GGSSSGSA AV + L DF+LGTDTGGSVR PA++CG
Sbjct: 85 AFSMNGNNAHFGAPLNGAAPDRITGGSSSGSAAAVSSGLCDFALGTDTGGSVRAPANHCG 144
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS-QVI 205
++G RP+H VS G + +A S DT GWFA D + RV VL L DD + P +++
Sbjct: 145 LYGLRPTHGRVSLEGAMDLAPSLDTCGWFARDVQTFARVADVL--LGDDAAPLPPRVRLL 202
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
D L QG + V L G N +L
Sbjct: 203 LPTDVWALLDPTVVGALQGATQQVTDLLGPSQPANAVL---------------------- 240
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
S + R +Q E G + P LGPG++ER + + ++ +
Sbjct: 241 ----ESFDTMYWNFRYVQGREAWMTDGPLIERYAPPLGPGVAERFAWSRDVTDGQVASAR 296
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ + RA L+ALLG G+L++PT+P P S+LE +R RA +L IAG+SGF Q
Sbjct: 297 AFRDRYRAHLAALLGRDGVLLLPTMPDIAPLRTAPESSLEDYRNRAIQMLCIAGLSGFPQ 356
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+S+PL D P+ +SLL GSD L L E +
Sbjct: 357 LSMPLARRDGAPLGLSLLGPAGSDRSLTALAERI 390
>gi|13472622|ref|NP_104189.1| amidase [Mesorhizobium loti MAFF303099]
gi|14023368|dbj|BAB49975.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Mesorhizobium loti
MAFF303099]
Length = 398
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 218/420 (51%), Gaps = 30/420 (7%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
M Y AF++ P + A PL+GL A+KDI+DV G+ TG GN +AA
Sbjct: 1 MTGTHGPYNAFLD-LRQMPVAHAELGPLAGLRLAVKDIYDVAGYRTGCGNSRKFTESNAA 59
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
+ TAPAV +L GA +GKT DE+A+++ G+N H+ P NP APDRV GGSSSGSA A
Sbjct: 60 SRTAPAVQTILDAGARFVGKTQTDELAFALFGQNAHFPFPVNPAAPDRVTGGSSSGSASA 119
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK 180
V +L D + G+DTGGS+R PAS+CG+ G R +H ++ G + +A SFDT GWFA D +
Sbjct: 120 VAGRLADIATGSDTGGSIRAPASFCGLIGLRTTHGRIALDGTMKLAPSFDTFGWFADDIE 179
Query: 181 ILNRVGRVLL-QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE 239
VG++LL + +L RP + + ++ ++
Sbjct: 180 TYETVGKLLLGRDPHQHSLDRPISLTWLDE---------------------------MVA 212
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVK 299
LG+Y K + F +S S L R LQ E HG+W+T+ +
Sbjct: 213 RPALGEYAAMKALAGAVFGMPATSTTRFS-SSPDELYWCFRRLQAREAWGVHGEWITSGE 271
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
DLGPG+ ER + + R LSALLG G LV+PTVPGP P +
Sbjct: 272 RDLGPGVEERFGFGRAVDDRTAQAENVRRLTFRGELSALLGQDGFLVLPTVPGPAPYVDS 331
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
P + +R RA LL +AG+SGF Q+++P+G P +SLL GSD L+ L L
Sbjct: 332 TPEQFQAYRERALHLLCLAGLSGFPQITLPIGSVAGAPFGLSLLGPSGSDIALIRLGRKL 391
>gi|390567075|ref|ZP_10247425.1| amidase [Burkholderia terrae BS001]
gi|389941018|gb|EIN02797.1| amidase [Burkholderia terrae BS001]
Length = 400
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 203/398 (51%), Gaps = 33/398 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL A+KD+FD+ G TG GN W A TA AV +L GA IGKT+ DE+
Sbjct: 35 LAGLRLAVKDVFDIAGLRTGSGNLAWRDQQPVAARTALAVRGLLEEGAQWIGKTVTDELT 94
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP P R+PGGSSSGS VAV A D +LGTD GGSVR+PASYCG+
Sbjct: 95 YSLAGVNAHYGTPVNPADPARIPGGSSSGSVVAVAAGHADIALGTDCGGSVRLPASYCGV 154
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H ++T G + +A SFDTVGWFA D + L + VL + S V+
Sbjct: 155 WGMRPTHGRIATDGCLTLAHSFDTVGWFARDGRTLADIFEVLAR----------SVVMAG 204
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV-ILGDYVKDKVPSLQHFLSEGNKEQE 266
++ L V + L+ V+ ++ +LGD V P
Sbjct: 205 DEPFAL------HVPRNLLACVDTQVAARFEASLQVLGDVVTFVAP-------------- 244
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ SLA + A R LQ E +G W G + R ++ + +I Q
Sbjct: 245 --VASLADWAQAFRALQAAEIAQRYGPWARAHAASFGLDVGARFAMSLTITPDQIADAQR 302
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+ E A++ L ++PTVPG P+ ++ RAR+ +L +AG++G QV
Sbjct: 303 VRIEAIRAMADALPQGSYWLVPTVPGVAPRADASAQTVDNTRARSQQMLCVAGLAGLPQV 362
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
++P D PV +SL+ G+D +L +H ++
Sbjct: 363 NMPWTSFDGAPVGLSLIGARGADEGVLRTARAVHEAMR 400
>gi|332528853|ref|ZP_08404827.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041712|gb|EGI78064.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 395
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 216/409 (52%), Gaps = 43/409 (10%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P + A PL+GL+F +KD+FDV G+ TG GNP T TAP V +L GA
Sbjct: 17 PVAHASTGPLAGLSFGVKDLFDVAGYPTGGGNPIVLALSGLKTRTAPTVQKLLDAGARFA 76
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT+ DE+A+S+NG N H+G P N APDR+ GGSSSGSA AV ++L DF+LGTDTGGSV
Sbjct: 77 GKTVTDELAFSMNGNNAHFGAPINGAAPDRITGGSSSGSASAVSSRLCDFALGTDTGGSV 136
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ-----LA 193
R PA++CG++G RP+H VS G + +A S DT GWFA D RV VLL L
Sbjct: 137 RAPANHCGLYGIRPTHGRVSLEGALDLAPSQDTCGWFARDVMTFARVADVLLDTDPQPLP 196
Query: 194 DDVNLVRPSQV---IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
V L+RP+ V + E LS V+ VE L G + +L
Sbjct: 197 ARVRLLRPTDVWALLVPEVTAALSPA---------VQRVETLLGTCSPVHAVLD------ 241
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
S A+ + R +Q E G + P LGPG++ER
Sbjct: 242 --------------------SFDAMYWSFRHIQGREAWTTDGPLIERYAPPLGPGVAERF 281
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
A + ++ + +T R L+ LLG+ +L++PT+P P SALE +R R
Sbjct: 282 AWAREVTDAQVQAATTFRTRFRQHLTQLLGNDAVLLMPTMPDIAPLRSTSESALEDYRNR 341
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
A +L IAG++GF Q+S+PL + P+ +SLL GSD L+ L E +
Sbjct: 342 AIQMLCIAGLAGFPQLSMPLAQREGAPLGLSLLGPAGSDRALIALAERI 390
>gi|377807550|ref|YP_004978742.1| amidase [Burkholderia sp. YI23]
gi|357938747|gb|AET92304.1| Amidase [Burkholderia sp. YI23]
Length = 401
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 204/401 (50%), Gaps = 39/401 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ L A+KD+FD+ G TG GNP W A TA AV A+L GA +GKT+ DE+
Sbjct: 36 LATLRLAVKDVFDIGGLRTGGGNPVWRDQQPVAARTALAVRALLEEGAQWVGKTVTDELT 95
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP P R+PGGSSSGS VAV A+ D +LGTD GGSVR+PASYCG+
Sbjct: 96 YSLAGVNAHYGTPVNPADPARMPGGSSSGSVVAVAARHADVALGTDCGGSVRLPASYCGV 155
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H ++T G + +A SFDTVGWFA DP L + VL Q ++V P FA
Sbjct: 156 WGMRPTHGRIATDGCLTLAHSFDTVGWFARDPHTLALMFEVLAQ-----SVVGPDDDAFA 210
Query: 208 ----EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ L + P V S+E LG+ P
Sbjct: 211 VHVPRNLLACADAP---VAARFEASLEA-----------LGERASFVAP----------- 245
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
S+P A A R+LQ E +G W G + R ++ + ++I
Sbjct: 246 --RASLPDWA---QAFRVLQAGEIAQRYGAWAREHSASFGADVGARFAMSLTITREQIAE 300
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
Q V+ E A++ L ++PTVPG P+ ++ RARA +L +AG++G
Sbjct: 301 AQRVRIEAIHAMAEALPHGTYWLVPTVPGAAPRTDASAETVDHTRARAQQMLCVAGLAGL 360
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
QVS+P PV +S++ G+D +L + +H ++
Sbjct: 361 PQVSMPWTRIGGAPVGVSVIGARGADEGVLRVARAVHELMR 401
>gi|433773331|ref|YP_007303798.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
gi|433665346|gb|AGB44422.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
Length = 398
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 223/420 (53%), Gaps = 30/420 (7%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
M + AF++ P + A PL+GL A+KDI+DV G+ TG GN AA
Sbjct: 1 MTGTHGPFNAFLD-LRQMPVAHAELGPLAGLRLAVKDIYDVAGYRTGCGNLQKFANGHAA 59
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
+ TAPAV A+L GA IGKT DE+A+++ G+N H+ P NP APDRV GGSSSGSA A
Sbjct: 60 SRTAPAVQAILDAGARFIGKTQTDELAFALFGQNAHFPFPVNPAAPDRVTGGSSSGSAAA 119
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK 180
V +L D + G+DTGGS+R PAS+CG+ G R +H +S G + +A SFDT GWFA D +
Sbjct: 120 VAGRLADIATGSDTGGSIRAPASFCGLIGLRTTHGRISLDGTMQLAPSFDTFGWFADDIE 179
Query: 181 ILNRVGRVLL-QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE 239
VG++LL + +L RP + + + ++ + P+ G+ V +FG
Sbjct: 180 TYETVGKLLLGRDPHQHSLDRPLALSWLD---EMVARPAAAEYAGMKALVGTVFG----- 231
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVK 299
P++ + ++ Y R LQ E HG+W+T+ +
Sbjct: 232 -----------TPAMPTTRFSSSPDELY---------WCFRRLQAREAWTVHGEWITSGE 271
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
+LGPG+ ER + + + R LSALLG G LV+PTVPGP P +
Sbjct: 272 RELGPGVEERFGFGRAVDDRTAQTEKVRRLTFRGELSALLGKDGFLVLPTVPGPAPYIDS 331
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
P + +R RA LL +AG+SGF Q+++P+G P +SLL GSD L+ L L
Sbjct: 332 TPEQFQAYRERALHLLCLAGLSGFPQITLPIGSVAGAPFGLSLLGPSGSDIGLIRLGRKL 391
>gi|337266483|ref|YP_004610538.1| Amidase [Mesorhizobium opportunistum WSM2075]
gi|336026793|gb|AEH86444.1| Amidase [Mesorhizobium opportunistum WSM2075]
Length = 398
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 212/407 (52%), Gaps = 27/407 (6%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P + A PL+GL A+KDI+DV G+ +G GNP AA+ TAPAV +L GA +
Sbjct: 18 PVAHAELGPLAGLRLAVKDIYDVAGYRSGCGNPRKFADSPAASRTAPAVQVILDAGARFV 77
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT DE+A+++ G+N H+ P NP APDRV GGSSSGSA AV KL D + G+DTGGS+
Sbjct: 78 GKTQTDELAFALFGQNAHFSFPVNPAAPDRVTGGSSSGSAAAVAGKLADIATGSDTGGSI 137
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R PAS+CG+ G R +H +S G + +A SFDT GWFA D + VG++LL
Sbjct: 138 RAPASFCGLIGLRTTHGRISLDGTMKLAPSFDTFGWFADDIETYETVGKLLLG------- 190
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
D+ L + + + ++ L +Y K + F
Sbjct: 191 -------------------RDQHHHHLDRQLALGWLDELVARPALAEYAGMKRLASAVFG 231
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
+ +S S L R LQ E HG+W+T+ + DLGPG+ ER
Sbjct: 232 APATPTMPFS-SSPDELYWCFRRLQAKEAWGVHGEWITSGERDLGPGVEERFGFGRAVDE 290
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ + + R L ALLG G LV+PTVPGP P + P + +R RA LL +A
Sbjct: 291 RTAQAEEVRRLTFRGELGALLGKDGFLVLPTVPGPAPYVDSTPEQFQAYRERALHLLCLA 350
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
G+SGF Q+++P+G P +SLL GSD L+ L L + ++
Sbjct: 351 GLSGFPQITLPIGSVAGAPFGLSLLGPSGSDIALIRLGRKLLDAAQK 397
>gi|335421114|ref|ZP_08552141.1| amidase [Salinisphaera shabanensis E1L3A]
gi|334892696|gb|EGM30925.1| amidase [Salinisphaera shabanensis E1L3A]
Length = 404
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 220/393 (55%), Gaps = 33/393 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSGL FA+KD+FD+ G TGFG P W +H A + A + +L+ G +G+TI DE+
Sbjct: 27 LSGLLFAVKDVFDIAGTRTGFGQPQWLASHPPADTNADCIDRLLAAGGELVGRTISDELC 86
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G+N HYG P N R+ GGSSSGSA AV A LVDF+LGTD GGSVRVP+SYCG+
Sbjct: 87 YSLTGDNIHYGAPANSWGLGRLAGGSSSGSAAAVCAGLVDFALGTDCGGSVRVPSSYCGL 146
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G R +H V+T G++ A FD +GWFA D I RVGRVLL A + + +V+ A
Sbjct: 147 LGLRTTHGRVATRGLLRFASQFDCIGWFARDAHIFERVGRVLLPDAREQGAFK--RVLIA 204
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D + ++ I + +P+L+ ++ ++ QE
Sbjct: 205 TDAFE------------------------AVDTEIAAAF----LPALETLGAQADRMQEI 236
Query: 268 SIPS--LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ LA R++Q + + GDWV +P LGPG+ ER+ +A + +A ++ Q
Sbjct: 237 QLAEDGLAEWFETFRIIQAADVWDALGDWVAQTRPTLGPGVRERIEQAGQINAAQLREAQ 296
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE-VFRARAFSLLSIAGVSGFC 384
+ + E+ L AL+G+ ++V+PT P P P ALE +R +A SLL AG++G
Sbjct: 297 AHRAEIVKRLDALIGEDDVVVLPTTPRPAPPRGATDEALETTYRYQAMSLLCSAGLAGLP 356
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
Q+++PL + D LP+ +S++ + D L+ L
Sbjct: 357 QMNLPLAMKDGLPLGLSIMTRRNGDMRLIELAR 389
>gi|357023041|ref|ZP_09085256.1| amidase [Mesorhizobium amorphae CCNWGS0123]
gi|355545028|gb|EHH14089.1| amidase [Mesorhizobium amorphae CCNWGS0123]
Length = 399
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 219/409 (53%), Gaps = 30/409 (7%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P + A PL+GL A+KDI+DV G+ TG GNP AA+ TA AV +L GA +
Sbjct: 18 PVAHAQLGPLAGLRLAVKDIYDVAGYRTGCGNPRKFAEAHAASQTAEAVQVILDAGARFV 77
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT DE+A+S+ G+N H+ P NP APDRV GGSSSGSA AV L D ++G+DTGGS+
Sbjct: 78 GKTQTDELAFSLMGQNAHFPFPVNPAAPDRVTGGSSSGSAAAVAGGLADIAVGSDTGGSI 137
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-QLADDVN 197
R PAS+CG+ G R +H +S G + +A S DT GWFA D + VG++LL +
Sbjct: 138 RAPASFCGLIGLRTTHGRISLEGAMKLAPSLDTFGWFADDIETYEAVGKLLLGRDPHQHA 197
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
L RP + + D G ++ E Y + K + F
Sbjct: 198 LNRPLSIGWL-----------DAFVTGPAEAAE---------------YAEMKARAAAVF 231
Query: 258 LSEGNKEQEY-SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
+ + S+P L R LQ YE HG+W+T +P LGPG+ ER
Sbjct: 232 GEPAPVDYSFASVPD--ELYWCFRRLQAYEAWQVHGEWITAGEPRLGPGVDERFSFGRAV 289
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
A+ + + + R+ L+ LLG+HG L++PTVPGP P + L+ +R RA LL
Sbjct: 290 DARTAEAETARRLVFRSELARLLGNHGFLLLPTVPGPAPLVNGTAEQLQAYRERALHLLC 349
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
++G+SGF Q+++PLG D P +SL+ GSD L+ L L + ++
Sbjct: 350 LSGLSGFPQITLPLGSVDGAPFGLSLVGPSGSDIALIRLGRKLLDAARK 398
>gi|187919949|ref|YP_001888980.1| amidase [Burkholderia phytofirmans PsJN]
gi|187718387|gb|ACD19610.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 399
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/419 (37%), Positives = 226/419 (53%), Gaps = 37/419 (8%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+ +Q +++A PL GL FA+KD+ DV G TG GNPDW TH+AA AP V A
Sbjct: 3 AFIPGSRVQAAATASG-PLDGLRFAVKDLIDVAGEPTGGGNPDWLSTHAAARVHAPCVDA 61
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L+ GAT GKTI DE+AYS+ GEN HYGTP NP P +PGGSSSGSA AV VDF+
Sbjct: 62 LLAAGATLDGKTITDELAYSLEGENHHYGTPLNPRWPQALPGGSSSGSASAVANGDVDFA 121
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDTGGSVRVPA++CG+FG RPSH A++ GV+P A FDTVGWFA +L VG VL
Sbjct: 122 LGTDTGGSVRVPAAFCGLFGMRPSHGAIALDGVLPFAPCFDTVGWFARSIAVLQAVGDVL 181
Query: 190 LQL---ADDVNLVRPSQVIFAEDCL--QLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
L + D +L RP ++ + + + P D + ++ + G + NV G
Sbjct: 182 LPVMSRGDGASLNRPVRLTRVAEAFAARERNEPDDAAR---LTALAESLGAQSLRNVFSG 238
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGP 304
+ + + +Q E + G+W+ + +P GP
Sbjct: 239 GGAR--------------------------WLACYQAVQDLEIDASLGEWIRSTQPRFGP 272
Query: 305 GISERVWEAVRTSAQKIDVCQSVKTELRAALSALLG--DHGILVIPTVPGPPPKLQMDPS 362
I+ R Q+ ++V ELR+AL +L ++ +LV+PT P +
Sbjct: 273 SIAPRFARLETLDRQRATQWRTVLQELRSALDSLFKEEENTVLVMPTTPVSLLRKDASGE 332
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
A+ F + ++ S+A G Q+++P + P+A+SL+ GSD LL+L L++
Sbjct: 333 AIGRFYEDSLTMNSLAAFGGLPQITLPFNDALDRPLALSLIGARGSDRALLSLARDLYS 391
>gi|149204307|ref|ZP_01881274.1| Amidase [Roseovarius sp. TM1035]
gi|149142192|gb|EDM30239.1| Amidase [Roseovarius sp. TM1035]
Length = 364
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 206/394 (52%), Gaps = 41/394 (10%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
+ +KD FD+ GHVTG G P+W + H AAT+T+P V +L GA IGKT MDE+AYS+
Sbjct: 1 MRVGVKDGFDIAGHVTGAGCPEWGQFHGAATATSPVVQVLLDSGAEIIGKTQMDELAYSL 60
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N YGTP NP A DRVPGGSSSGSA +V A LVD LG+DTGGSVR+PAS+CG++G+
Sbjct: 61 MGVNARYGTPLNPAAQDRVPGGSSSGSAASVAAGLVDIGLGSDTGGSVRLPASFCGVYGW 120
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
RP+H +S ++P+A S+DT G+F D + V V D V+P + D
Sbjct: 121 RPTHGLMSGDSLVPLAPSYDTPGFFTRDLMTMATVASV---FQDAPATVKPIKFWLPSD- 176
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH----FLSEGNKEQE 266
L S+ V+ L +D +P + H L +G+
Sbjct: 177 --LWSLAESGVSAAL----------------------RDALPVVDHRSDPILPDGD---- 208
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
L+ A R+ Q YE G W+T +PD GPGI ER A R + Q D
Sbjct: 209 -----LSDWLGAFRIHQGYEIWQTLGPWITQNQPDFGPGIRERFETASRITRQDFDSAVE 263
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+ +R L + ILV PT PG P S LE+FR A ++L +AG +G Q+
Sbjct: 264 KRCAIREHLEKAIDPATILVFPTSPGAAPLRSTQQSDLELFRNAALTMLCVAGHAGLPQI 323
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
SIPL + PV +SL G+D L+ +
Sbjct: 324 SIPLATYTGAPVGLSLAGAKGADHLLIKTAQIFE 357
>gi|91779038|ref|YP_554246.1| amidase [Burkholderia xenovorans LB400]
gi|91691698|gb|ABE34896.1| Putative amidase [Burkholderia xenovorans LB400]
Length = 405
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 206/399 (51%), Gaps = 33/399 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G + A+KD+FD+ G TG GN W A TA AV A+L GA IGKT+ DE+
Sbjct: 36 LVGRSLAVKDVFDIAGLRTGSGNLAWRAAQPVAARTALAVRALLEEGAQWIGKTLTDELT 95
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP P R+PGGSSSGSAVAV A+ D ++GTD GGSVR+PASYCGI
Sbjct: 96 YSLAGVNAHYGTPVNPADPARIPGGSSSGSAVAVAAQHADIAIGTDCGGSVRLPASYCGI 155
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R +H ++ G + +A SFDTVGWFA D L V VL + S V +
Sbjct: 156 WGIRATHGRIAGDGCLTLAHSFDTVGWFARDAHTLADVFEVLAR----------SIVTWD 205
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV-ILGDYVKDKVPSLQHFLSEGNKEQE 266
++ L V + L+ ++ ++ LGD V P
Sbjct: 206 DEPFTL------HVPRHLLACADEEVATRFEASLQALGDNVSFVSPD------------- 246
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
SLA + A R+LQ E +G W G + R ++ + +++ Q
Sbjct: 247 ---ASLAQWAQAFRVLQAAEIAQRYGHWAREHASSFGADVGARFAASLTITREQVADAQR 303
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+ + A++ L ++PTVPG P+ A++ RAR+ +L +AG++G QV
Sbjct: 304 VRVQANRAMAEALAPGTYWLVPTVPGVAPRADASAQAVDHTRARSQQMLCVAGLAGLPQV 363
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
S+P D PV +S++ G+D +L + T+H +++
Sbjct: 364 SMPWTTIDGAPVGMSVIGGRGTDEGVLRVARTVHEAMRK 402
>gi|404330636|ref|ZP_10971084.1| Amidase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 395
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 208/414 (50%), Gaps = 38/414 (9%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
DYGAF++ + SS + PL GL FA+KD+F V G+ GNP W A+ A A
Sbjct: 6 DYGAFIDHSL--HISSGNSGPLGGLHFAVKDVFSVKGYKNTAGNPTWLEHAKRASENADA 63
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V +L+ GA +G T+ DE+ YS+ G+NKH+ NP A + GGSSSGSAVAV +
Sbjct: 64 VDRLLTEGAALVGTTVTDELMYSLKGDNKHFPPTINPKAQNCYTGGSSSGSAVAVASHQT 123
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DF++GTDTGGSVRVP+SYCGIFG RPSH +S GVIP+A SFDTV W + L++VG
Sbjct: 124 DFAMGTDTGGSVRVPSSYCGIFGMRPSHGRISMKGVIPLAPSFDTVSWMSGSADTLSKVG 183
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
LL V+ R + +L P D D+
Sbjct: 184 LSLLP-NQPVHTYR--HLFIFNKAFELVQDPDD-----------------------FTDF 217
Query: 247 VKDKVPSLQHFLSEGNKEQEYSI---PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
+ L + E K Q + S L+ R+LQ E +HG W+ PD G
Sbjct: 218 TR-----LLRLIKERYKLQSVDLMQDHSFEELTECFRILQGREAWLSHGKWIQACHPDFG 272
Query: 304 PGISERVWEAVRTSA-QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
I+ER A + + S+K E A + LLG +++IPT PG P+ D
Sbjct: 273 KDIAERFESASKIKEDEAYSQMLSLKREFTAEMRKLLGTDSMVLIPTTPGTAPERGGDFV 332
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
E R++ L +AG+SG Q++ P P+ +S ++ + +D LL+ V
Sbjct: 333 TAEQLRSKTMKLTCLAGLSGVPQITAPF-RQSKKPLGLSFISGYNTDRQLLSFV 385
>gi|374711333|ref|ZP_09715767.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Sporolactobacillus
inulinus CASD]
Length = 389
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 204/393 (51%), Gaps = 31/393 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G FA KD+F V GHVT G P WA TH AA + AP V ++L GA G T+ DE+
Sbjct: 25 LNGTVFAAKDVFAVRGHVTSAGQPLWASTHPAAEAHAPVVKSLLECGARLRGMTVTDELM 84
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G+N HY NP PD GGSSSGSAVA ++ VDF++GTDTGGSVR+P+SYCG+
Sbjct: 85 YSLKGDNIHYPPTINPRVPDAYSGGSSSGSAVATASEAVDFAIGTDTGGSVRIPSSYCGL 144
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG RPSH AVS GV+P+A SFDTVGW A ++L RVG LL + R Q+ A
Sbjct: 145 FGIRPSHGAVSLEGVVPLAPSFDTVGWMARSAELLERVGSCLLPEKASASFQRFYQLKEA 204
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ I V Q L ++K+ + L+ + +
Sbjct: 205 -----WAQIDHPSVLQSLRA------------------FIKEHLSDLK------IEPTQL 235
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK-IDVCQS 326
+ A L+ R+LQ YE +HG W+ P + R A + K +
Sbjct: 236 PLAKPAELAETFRVLQGYEAWQSHGLWIEQNHPHFARDVGGRFEAASKMKKDKAYQQAAA 295
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
K + + A LG G+L+IPT GP PK + RAR L IAGVSG QV
Sbjct: 296 TKQQFTEKIRAFLGSDGLLIIPTTYGPAPKRGSGAEESDKVRARTMQLTCIAGVSGLPQV 355
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
++P+ L P+ +S ++ +G+D LL V +
Sbjct: 356 TVPI-LELAAPIGLSFISGYGTDRQLLAFVRNV 387
>gi|329902981|ref|ZP_08273325.1| Amidase [Oxalobacteraceae bacterium IMCC9480]
gi|327548533|gb|EGF33197.1| Amidase [Oxalobacteraceae bacterium IMCC9480]
Length = 562
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 228/432 (52%), Gaps = 42/432 (9%)
Query: 2 ASRDSDYGAFMEKFVLQPSSSAHQL-------------PLSGLTFAIKDIFDVDGHVTGF 48
A+R SD+ + + ++SAH PLSGLTFA+KDIFDV G+ TG
Sbjct: 156 AARVSDHTNARHRRGIDMTTSAHCFIPYPDAPVAAGTGPLSGLTFAVKDIFDVAGYPTGC 215
Query: 49 GNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDR 108
GNP ++A V + GA+ +GKT DE+A+S+NG+N H+GTP N APDR
Sbjct: 216 GNPHMLALSGIKPASASVVRTLAEAGASFVGKTCTDELAFSMNGKNAHFGTPRNGGAPDR 275
Query: 109 VPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQS 168
+PGGSSSGSA AV L D +LGTDTGGSVR PAS+CG+ G RP+H+ VS G + +A
Sbjct: 276 IPGGSSSGSASAVSNGLADIALGTDTGGSVRAPASHCGLVGLRPTHARVSLQGAMDLAPD 335
Query: 169 FDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKS 228
FDT GWF D RVG VL L DD + + + + P RV Q +
Sbjct: 336 FDTCGWFTRDIDTFARVGDVL--LGDDTCALPDAPQVLLAVDVLDLLSP--RVQQVFADA 391
Query: 229 VEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFK 288
+E+L + +LG E + PS AL A R +Q Y+
Sbjct: 392 LERL-------SPVLGTL----------------HEVTTAAPSFDALYWAFRHIQGYQAW 428
Query: 289 NNHGDWVTTVKPDLGPGISERV-WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVI 347
HG + LGPG+++R W T+AQ ++ +++ A +ALLG+ ++V+
Sbjct: 429 QQHGACIEQYGLQLGPGVADRFSWSRTVTAAQMLEY-SAIRATFAAHFAALLGNDKVMVL 487
Query: 348 PTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHG 407
P++P P L +ALE +R +A +L ++G+SG Q+S+PL D P S++ G
Sbjct: 488 PSMPDIAPLLTDSETALENYRNQAIRMLCLSGLSGLPQISLPLMTIDGAPFGFSVIGPAG 547
Query: 408 SDGFLLNLVETL 419
SD L+ TL
Sbjct: 548 SDQSLIAFARTL 559
>gi|319791578|ref|YP_004153218.1| amidase [Variovorax paradoxus EPS]
gi|315594041|gb|ADU35107.1| Amidase [Variovorax paradoxus EPS]
Length = 392
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 164/407 (40%), Positives = 216/407 (53%), Gaps = 39/407 (9%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P + A PLS L+FA KD+FDV G+ TG GNP T TAP V +L GA
Sbjct: 17 PVARAGTGPLSDLSFAAKDLFDVAGYPTGGGNPIVLAMSGIKTRTAPTVQKLLDAGARFA 76
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT+ DE+A+S+NG N H+G P N AP R+ GGSSSGSA AV + L DF+LGTDTGGSV
Sbjct: 77 GKTVTDELAFSMNGNNAHFGAPANGGAPLRITGGSSSGSASAVSSNLCDFALGTDTGGSV 136
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-----QLA 193
R PA++CG++G RP+H VS G + +A SFDT GWFA D RV VLL L
Sbjct: 137 RAPANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDIGTFARVADVLLGADAQALP 196
Query: 194 DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS 253
+ V L+RP +D L+ + Q V+ L G P+
Sbjct: 197 ERVRLLRP------DDVWALAVPAAAEALQDAADRVQSLLG-----------------PA 233
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VWE 312
K ++ S A+ R LQ E G + P LGPG++ER W
Sbjct: 234 ---------KGTTVAMESFDAMYWHFRYLQSREAWLTDGPLIERYAPPLGPGVAERFAWS 284
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF 372
T AQ + + +T RA L+ LLG G+L++PT+P P +++E +R RA
Sbjct: 285 RDVTDAQ-VATARVFRTAFRAHLANLLGTDGVLLMPTMPDIAPLRSDSEASMEDYRNRAI 343
Query: 373 SLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
LL IAG++GF Q+S+PL D P+ ISLL GSD L+ L E +
Sbjct: 344 RLLCIAGLAGFPQLSMPLATRDGAPLGISLLGPAGSDRSLIALAERI 390
>gi|319781639|ref|YP_004141115.1| amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167527|gb|ADV11065.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 398
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 223/409 (54%), Gaps = 31/409 (7%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGN-PDWARTHSAATSTAPAVLAVLSGGATS 77
P + A PL+GL A+KDI+DV G+ TG GN +A +H AA+ TAPAV +L GA
Sbjct: 18 PVAHAQLGPLAGLRLAVKDIYDVAGYRTGCGNLQKFAESH-AASRTAPAVQMILDAGARF 76
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
+GKT DE+A+++ G+N H+ P NP APDRV GGSSSGSA AV +L D + G+DTGGS
Sbjct: 77 VGKTQTDELAFALFGQNAHFSFPVNPAAPDRVTGGSSSGSAAAVAGRLADIATGSDTGGS 136
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H +S G + +A S DT GWFA D + VG++LL +
Sbjct: 137 IRAPASFCGLIGLRTTHGRISLDGTMKLAPSLDTFGWFADDIETYETVGKLLLGRDPHQH 196
Query: 198 LV-RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
++ RP + + + + ++ +GL +V FG P+++
Sbjct: 197 VLDRPLALDWLDGLVARPALAEYAGMKGLAGAV---FGA-------------PATPAIR- 239
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
F S ++ L R LQ E HG+W+T+ + DLGPG+ ER
Sbjct: 240 FSSSPDE-----------LYWCFRRLQAKEAWAVHGEWITSGERDLGPGVEERFGFGRAV 288
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
+ + + R LSALLG G LV+PTVPGP P + P + +R RA LL
Sbjct: 289 DDKTAQAEKVRRLTFRGELSALLGKDGFLVLPTVPGPAPYVDSTPEQFQAYRERALQLLC 348
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+AG+SGF Q+++P+G P +SLL GSD L+ L L + ++
Sbjct: 349 LAGLSGFPQITLPIGSVAGAPFGLSLLGPSGSDIALIRLGRKLLDAARK 397
>gi|85707490|ref|ZP_01038568.1| amidase [Roseovarius sp. 217]
gi|85668000|gb|EAQ22883.1| amidase [Roseovarius sp. 217]
Length = 364
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 205/393 (52%), Gaps = 45/393 (11%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
+ +KD FD+ G VTG G P+WA+ H AT T+P V A+L GA IGKT MDE+AYS+
Sbjct: 1 MRVGVKDGFDIAGQVTGAGCPEWAKFHGVATKTSPVVRALLDAGAEIIGKTQMDELAYSL 60
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N YGTP NP APDRVPGGSSSGSA V A LV+ LG+DTGGS+R+PAS+CG+FG+
Sbjct: 61 MGVNARYGTPVNPAAPDRVPGGSSSGSAAGVAAGLVEIGLGSDTGGSIRLPASFCGLFGW 120
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL---ADDVNLVRPSQVIFA 207
RP+H +S ++P+A S+DT G+F D + V V A+ VN PS
Sbjct: 121 RPTHGLISGDKLVPLAPSYDTPGFFTRDLGTMAAVASVFQSAQTSAEQVNFWLPS----- 175
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF---LSEGNKE 264
L S+ + V+ L + +P ++H +S G+
Sbjct: 176 ----DLWSLAEEGVSAAL----------------------RAALPVVEHRSDPISRGD-- 207
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
LA R+ Q YE G W+ +P+ GPGI ER A R + Q D+
Sbjct: 208 ------DLAGWLEVFRIHQGYEIWQTLGPWIIQNQPNFGPGIRERFETASRITRQDFDLA 261
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ +RA L + ++V PT PG P LEV R A ++L +AG +G
Sbjct: 262 VERRYNIRAHLEKAIDSKTVIVFPTSPGAAPLRSTQQGDLEVLRNAALTMLCVAGHAGLP 321
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
Q++IPL + + PV +SL G+D LL +
Sbjct: 322 QITIPLTTYASAPVGLSLAGARGTDHLLLETAQ 354
>gi|326793479|ref|YP_004311299.1| amidase [Marinomonas mediterranea MMB-1]
gi|326544243|gb|ADZ89463.1| Amidase [Marinomonas mediterranea MMB-1]
Length = 401
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 197/387 (50%), Gaps = 39/387 (10%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
+PL+G+ A+KD+F + G T GNP W TH + TA +V + GA GKTI DE
Sbjct: 33 VPLTGMRLAVKDLFHIAGLPTSAGNPTWLATHETPSQTASSVQTLFDNGACFCGKTITDE 92
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+AYS+NG+N HYGTP NP PDR+PGGS+SGSAVAV + D LGTDTGGS+RVPASY
Sbjct: 93 LAYSLNGQNIHYGTPCNPTNPDRLPGGSTSGSAVAVASDFADIGLGTDTGGSIRVPASYN 152
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+FG RP+H ++ G++P+A SFDTVGW A D L LL + +++
Sbjct: 153 GLFGLRPTHGVIAVDGLVPLAPSFDTVGWLAQDLDHLEATANALLASKHSETI---QKIL 209
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A++ L++SVE + L +L+ K +
Sbjct: 210 IADN---------------LIQSVE---------------HANQIQTQLDTWLNNSEKTE 239
Query: 266 EYSIPSLA-ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-W-EAVRTSAQKID 322
I A S R LQ E HG+W+ P + P I R W +++ + QK
Sbjct: 240 SLEIDLDAWKASETFRTLQGAEILEQHGEWLAEHNPIIAPDIRMRFNWCKSISSDDQKHA 299
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
Q T R S L G IL+IPT PG P L L +R +L +IAG++G
Sbjct: 300 AIQR-DTFTRWIDSELKG--AILIIPTTPGRSPLLSTPDDELADYRIHLMNLTAIAGLAG 356
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSD 409
Q+ +P+ D P +SL+ SD
Sbjct: 357 LPQLHLPVCNIDGAPCGLSLIGPKNSD 383
>gi|146341317|ref|YP_001206365.1| amidase [Bradyrhizobium sp. ORS 278]
gi|146194123|emb|CAL78142.1| putative amidase [Bradyrhizobium sp. ORS 278]
Length = 400
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 212/413 (51%), Gaps = 34/413 (8%)
Query: 9 GAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
GAF+ +++ S PLSGL+FA+KD+FDV G VTG GNPDWA H A AV
Sbjct: 7 GAFLPNAIMR-RSPHRSGPLSGLSFAVKDLFDVAGDVTGCGNPDWAACHDTPERDAWAVD 65
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
A+ GAT GKTI DE++ + G N+ YGTP NP APDRVPGGSSSGSA AV LVD
Sbjct: 66 AMCCAGATLTGKTITDEISLGLLGINRFYGTPLNPRAPDRVPGGSSSGSASAVAGGLVDV 125
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
+LGTD+GGSVR PAS+CGI+G RP+H +S AG++ A SFDTVG+F D RVG V
Sbjct: 126 ALGTDSGGSVRTPASFCGIYGLRPTHGRISVAGLMTQAPSFDTVGYFTRDALTFGRVGSV 185
Query: 189 LLQ--LADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
LL +AD + ++ A DC L+ P Q +V + +
Sbjct: 186 LLAEPIADGLQ----PDIVIASDCFALADEPVRAALQPVVARLRSV-------------- 227
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
P+ + L++G L A R+LQ+ EF DW+ V P +
Sbjct: 228 ----APATEAALADGE---------LLAWGRHQRVLQKSEFHATFRDWIDRVNPRFSSEV 274
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
+ + R + Q + + + L +L +L +PT P P S +
Sbjct: 275 AGAFADDGRIAPQDLATAEVFRAAASKRLDDVLDGRRMLCLPTTPILPIARDAGLSEMRT 334
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
R L IAG++G QV++P+ +PV +SL+ G D LL +TL
Sbjct: 335 AVHRIVDLTCIAGLTGLPQVNLPVATSGAVPVGLSLIGWRGGDASLLAAAQTL 387
>gi|388256728|ref|ZP_10133909.1| amidase [Cellvibrio sp. BR]
gi|387940428|gb|EIK46978.1| amidase [Cellvibrio sp. BR]
Length = 397
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 212/406 (52%), Gaps = 41/406 (10%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P+ A L+GL +KD+F + G T GNPDW +H T+P V +L+ G
Sbjct: 18 KPNPCAESGRLAGLRLGVKDLFHIAGLPTAAGNPDWLASHPTPEQTSPVVTQLLNAGTEL 77
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
+GKT DE+AYS+NG N HYG P NP P+ +PGGSSSGSAVAV A +D LGTDTGGS
Sbjct: 78 VGKTQTDELAYSLNGLNIHYGAPINPACPECLPGGSSSGSAVAVAAGDIDIGLGTDTGGS 137
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADD 195
+RVPASY G+FG R SH +S+ ++P+A FDTVGW D + L +VG VLL +LA
Sbjct: 138 IRVPASYNGLFGIRTSHGLISSEQMVPLAPLFDTVGWLTRDAETLAQVGEVLLPAELAPR 197
Query: 196 VNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK--VPS 253
P + + A L L + G++ S E ++K + +P+
Sbjct: 198 F----PHRSLRAALLLPLQN--------GVLWSPEH------------QAWLKQQTLLPA 233
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-WE 312
++ L + L S R LQ HG+W+T +P P I R W
Sbjct: 234 VKPILLNSDW--------LTRASQCFRTLQGRAIWQTHGEWITANQPTFAPDIHTRFQWC 285
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF 372
A T A + ++ + L+A + D ++++PT PGP P L D ++ +R++
Sbjct: 286 ATLTDADQT-AAETERASLQADIEGWFTDVDLILLPTTPGPAPLLGADSQWMDSYRSQLM 344
Query: 373 SLLSIAGVSGFCQVSIPLGLHDN--LPVAISLLAKHGSDGFLLNLV 416
L + AG++G QV +P+ L D P +SLL + G D LL L
Sbjct: 345 GLTAPAGLAGLPQVHLPV-LRDEQGAPYGVSLLGRRGDDKALLQLA 389
>gi|395007398|ref|ZP_10391148.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
gi|394314606|gb|EJE51487.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
Length = 407
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 216/415 (52%), Gaps = 39/415 (9%)
Query: 15 FVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGG 74
FV++ +AH PL+GL FA KD+FDV G TG GNP W +H + V +L G
Sbjct: 25 FVIE--GAAHG-PLAGLRFAAKDVFDVAGQPTGAGNPAWLASHPVPARHSALVQQLLDVG 81
Query: 75 ATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDT 134
AT GK + DE+AYSI+G N HYG P N AP+R+PGGSSSGS AV A+LVDF+LGTDT
Sbjct: 82 ATLCGKLVTDELAYSIHGHNLHYGMPLNSAAPERIPGGSSSGSVAAVAARLVDFALGTDT 141
Query: 135 GGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD 194
GGS RVPASYCG++G R +H VS AG++P+ +SFDT WFA DP RV + LL A
Sbjct: 142 GGSTRVPASYCGVWGLRTTHGLVSRAGLVPLHESFDTATWFAHDPTTFERVAQALLP-AT 200
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
+R Q LQ ++ +D L+ V ++ + + V G + +L
Sbjct: 201 PFAALRAVQ-------LQDAAAEADAEVAALLPRVGEVLATLLPQGV--GTATAAQGSAL 251
Query: 255 Q----HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
+ H+++ G +E HG W++ P I+ R
Sbjct: 252 EDWRRHYVAWGA----------------------HEAWQAHGAWISANAPGFEAAIAGRW 289
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
A +A+ ++ RA + AL+G +LV+P+ P + + ++ RAR
Sbjct: 290 QAASEVTAEAAGAARAAGLAARAQVRALVGSGTVLVLPSAASVAPLRSAEGAEIDAIRAR 349
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+ IAG++G QVS+PL LP +SL+ GSD L+ L + L++
Sbjct: 350 TLRICCIAGLAGLPQVSLPLATAGGLPAGVSLIGPAGSDLALVRLAVRVWQALQD 404
>gi|91786295|ref|YP_547247.1| amidase [Polaromonas sp. JS666]
gi|91695520|gb|ABE42349.1| Amidase [Polaromonas sp. JS666]
Length = 394
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 220/399 (55%), Gaps = 30/399 (7%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P SA PL+ L F +KD+FDV G+ TG G+P T TAP V +L GA
Sbjct: 17 PVPSAFTGPLADLRFGVKDLFDVAGYPTGGGSPTVLALSGIKTRTAPTVQKLLDAGALFA 76
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT+ DE+A+S+NG N H+G P N A DR+ GGSSSGSA AV + L DF+LGTDTGGSV
Sbjct: 77 GKTVTDELAFSMNGNNAHFGAPLNGAAHDRITGGSSSGSASAVSSGLCDFALGTDTGGSV 136
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN- 197
R PA++CG++G RP+H VS V+ +A S DT GWFA D RVG VL L +DV
Sbjct: 137 RAPANHCGLYGLRPTHGRVSLESVLDLAPSLDTCGWFARDVGTFVRVGDVL--LGEDVTP 194
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQ-GLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
L ++++ ED + P+ RV + G +SV+ L G V+
Sbjct: 195 LPADVRLLWPEDVWAMMDAPARRVLESGAAQSVQSLLGPTTPVQVV-------------- 240
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
+E S A+ R +Q E G + P LGPG++ER +
Sbjct: 241 ------RE------SWDAMYWNFRYVQSREAWLTDGPLIERYAPSLGPGVAERFAWSCNV 288
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
+ ++++ ++ + RA L+ LLGD G+L++PT+P P ++LE +R RA +L
Sbjct: 289 TDEQVNAARAFRAAFRAQLAGLLGDDGVLLMPTMPDIAPLRSASEASLEDYRNRAIRMLC 348
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
IAG++GF Q+S+P+ H+ P+ +SLL G D LL L
Sbjct: 349 IAGLAGFPQLSMPMARHEGAPLGLSLLGPAGRDRSLLAL 387
>gi|186473369|ref|YP_001860711.1| amidase [Burkholderia phymatum STM815]
gi|184195701|gb|ACC73665.1| Amidase [Burkholderia phymatum STM815]
Length = 400
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 202/407 (49%), Gaps = 51/407 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL A+KD+FD+ G TG GN W TA AV A+L A IGKT+ DE+
Sbjct: 35 LAGLRLAVKDVFDIAGLRTGSGNLAWRDEQPVGLRTALAVRALLEEDARWIGKTVTDELT 94
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP P R+PGGSSSGSAVAV A D +LGTD GGSVR+PASYCG+
Sbjct: 95 YSLAGVNAHYGTPVNPADPARIPGGSSSGSAVAVAAGHADIALGTDCGGSVRLPASYCGV 154
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL-----LQLADDVNLVRPS 202
+G RP+H V++ G + +A SFDTVGWFA D + L V VL ++ + +NL P
Sbjct: 155 WGMRPTHGRVASDGCLTLAHSFDTVGWFARDARRLADVFEVLARSIVMERDEPINLHVPR 214
Query: 203 QVIFAED-----CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
++ D C + +S+P+ LGD V P
Sbjct: 215 SLLACVDAPVLACFE-ASLPA------------------------LGDAVTFVEPK---- 245
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
SL + A R+LQ E +G W G + R + +
Sbjct: 246 ------------ASLVDWAQAFRVLQAAEIAQRYGVWAYEHAASFGRDVGARFAMSRTIT 293
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
++I Q V+ E ++ L ++PTVPG P+ ++ RAR+ +L +
Sbjct: 294 CEQIADAQRVRVEAIRTMADALAQDTYWIVPTVPGVAPRADASAETVDHTRARSQQMLCV 353
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
AG++G QVS+P + PV +SL+ G+D +L +H ++
Sbjct: 354 AGLAGLPQVSMPWTRIEGAPVGLSLIGARGTDEGVLRAARAVHAAMR 400
>gi|385205231|ref|ZP_10032101.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385185122|gb|EIF34396.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 405
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 202/402 (50%), Gaps = 33/402 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G + A+KD+FD+ G TG GN W A TA V A+L G IGKT+ DE+
Sbjct: 36 LVGRSLAVKDVFDIAGLRTGSGNLAWRAAQPVAARTALVVRALLEEGVQWIGKTLTDELT 95
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP R+PGGSSSGSAVAV A+ D ++GTD GGSVR+PASYCGI
Sbjct: 96 YSLAGVNAHYGTPVNPADAARIPGGSSSGSAVAVAAQHADIAMGTDCGGSVRLPASYCGI 155
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R +H ++ G + +A SFDTVGWFA D + L V VL + S V +
Sbjct: 156 WGMRATHGRIAGDGCLTLAHSFDTVGWFARDARTLADVFEVLAR----------SIVTWD 205
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV-ILGDYVKDKVPSLQHFLSEGNKEQE 266
+ L V + L+ + ++ LGD V P
Sbjct: 206 GEPFTL------HVPRNLLACADAEVATRFEASLQALGDNVSFVSPD------------- 246
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
SLA + A R+LQ E +G W G + R ++ + ++I Q
Sbjct: 247 ---ASLAQWAQAFRVLQAAEIAQRYGHWAREHASSFGADVGARFAASLTVTREQIADAQR 303
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+ E A++ L ++PTVPG P+ A++ RAR+ +L +AG++G QV
Sbjct: 304 VRVEANRAMAEALAPGTYWLVPTVPGVAPRADASAQAVDHTRARSQQMLCVAGLAGLPQV 363
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQ 428
S+P D PV +S++ G+D +L + +H ++ L+
Sbjct: 364 SMPWTTFDGAPVGMSVIGGRGTDEGVLRVARIVHEATRKSLR 405
>gi|389693422|ref|ZP_10181516.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
gi|388586808|gb|EIM27101.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
Length = 397
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 216/410 (52%), Gaps = 28/410 (6%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AFM + P A PLSGLTFA KD+FDV G+ T G+P + TAP V
Sbjct: 10 AFM-PYPAVPVPHAPSGPLSGLTFAAKDLFDVAGYPTSAGSPHMLAMSGIKSRTAPTVQK 68
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L GA +GKTI DE+A+S++G+N H+GTP N APDR+PGGSSSGSA AV DF+
Sbjct: 69 LLDAGARLVGKTITDELAFSMSGKNAHFGTPVNGGAPDRIPGGSSSGSAAAVSNGSCDFA 128
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDTGGSVR PAS+CG+FG RP+H VS G +A SFDT G+F D RVG VL
Sbjct: 129 LGTDTGGSVRAPASHCGLFGIRPTHGRVSLEGCHDLAPSFDTCGYFTRDGATFVRVGEVL 188
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L D L + +V+ A+D L V L ++ + LG V
Sbjct: 189 LG-PDSAPLPQSPRVLLAQDAFGLLK---REVRDALAPALRR-------AEAALGQPVPA 237
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
V EG AL AMR +Q E N G + P LGPG+++R
Sbjct: 238 DV------APEG----------FTALYWAMRYIQSREAWNVDGPMIERYHPPLGPGVADR 281
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA 369
+ + ++ Q ++ R SALL D +L++P++P P L ++L +R
Sbjct: 282 FEFSKAVTDAQVAEAQVIRAAFRKRFSALLADGAVLILPSMPDIAPLLAESDASLNDYRN 341
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
A +LL ++ +SG QVSIPL P+ +S++ GSD L+ L + +
Sbjct: 342 NALNLLCLSVLSGLPQVSIPLASRSGAPLGLSIMGPAGSDLSLVALADRI 391
>gi|307107250|gb|EFN55493.1| hypothetical protein CHLNCDRAFT_9137, partial [Chlorella
variabilis]
Length = 373
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/391 (39%), Positives = 200/391 (51%), Gaps = 40/391 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA------VLAVLSGGATSIGK 80
PL+GL FA KD ++V G+ TG GNP WAR H A +TAPA + A+L GA GK
Sbjct: 2 PLAGLAFAAKDSYNVAGYATGLGNPSWARDHPPAKTTAPARKSPRCLQALLDAGANLAGK 61
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+AY +G+N HYGTP N AP +PGGSSSG A V + V F+LG DT GSVRV
Sbjct: 62 AAMSELAYDFSGQNYHYGTPPNTAAPCHMPGGSSSGCAALVASGEVAFALGGDTAGSVRV 121
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PAS+CG+F RPSH VS G +P+A SFDT GWFA D ++L+ VG+ LL +
Sbjct: 122 PASFCGVFSCRPSHGRVSLEGSVPLAPSFDTAGWFARDAELLSAVGKTLLAGS------A 175
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P + D L VT V L G E+ + H L+
Sbjct: 176 PGPAV---DSWNL-------VTATTPARVACLLAGACGESELC---------LFPHLLAA 216
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT-TVKPDLGPGISERVWEAVRTSAQ 319
+ + +P A LQ E G WV+ KP + GI++R+ A S Q
Sbjct: 217 ATYQCCWPLPLPLA-------LQSKEVNEVLGPWVSGPTKPAVSAGIAQRLKAASLVSKQ 269
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
+ + L +LLG +L++PT P P P L D A R +L SIA
Sbjct: 270 AAAAARQQADAITTRLDSLLGTSSVLLLPTTPFPAPPLGSDLEAQPDNVGRLMALTSIAS 329
Query: 380 VSGFCQVSIPLG-LHDNLPVAISLLAKHGSD 409
++G QVS+PL L D LPV +S++ GSD
Sbjct: 330 LAGLPQVSMPLATLEDGLPVGVSIIGPRGSD 360
>gi|410636966|ref|ZP_11347554.1| amidase [Glaciecola lipolytica E3]
gi|410143345|dbj|GAC14759.1| amidase [Glaciecola lipolytica E3]
Length = 395
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 196/403 (48%), Gaps = 40/403 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G T A+KD+F +DG VT GNPDWA +H T T+ V +L G +GKTI DE+
Sbjct: 28 PLKGWTLAVKDLFHIDGIVTSAGNPDWADSHPLPTKTSETVSRLLDAGVQYVGKTITDEL 87
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+NG+N HY N +R+ GGSSSGSAVAVG KL LGTDTGGS+R+PASY G
Sbjct: 88 AYSLNGQNIHYPALVNCLDNERICGGSSSGSAVAVGRKLARIGLGTDTGGSIRIPASYNG 147
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GFRPSH +S V+P+A SFDT GW + + +G+ LL
Sbjct: 148 LVGFRPSHGLISLKDVVPLAPSFDTAGWITNNIEDAVEIGKFLLP--------------- 192
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGH---IIENVILGDYVKDKVPSLQHFLSEGNK 263
KSVEK F ++ N++ K+++ + + N
Sbjct: 193 --------------------KSVEKHFMAAQPLVLNNLVESCEFKNELYTWLDSKFDKNW 232
Query: 264 EQEYSIPS--LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+ ++ S L S A R+LQ E HGDW+ +P I +R SA
Sbjct: 233 QSSLAVTSELLKDASDAFRVLQGREIWQTHGDWIKNTQPRFADDIQQRFQWCSTLSANDE 292
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ L +S +L +VIPT PGP P+ + +R + IAG++
Sbjct: 293 LAAIEQQQRLIKTVSLILNQQHYIVIPTTPGPAPRRDTSAREIAEYRKKLMQFTCIAGLT 352
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
G Q+ +PL N +S++ SD LL L + L ++
Sbjct: 353 GCPQLHMPLFQQKNTAYGVSIIGPKNSDLELLFLGKQLMENIE 395
>gi|94310875|ref|YP_584085.1| amidase [Cupriavidus metallidurans CH34]
gi|93354727|gb|ABF08816.1| Amidase [Cupriavidus metallidurans CH34]
Length = 396
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 212/405 (52%), Gaps = 27/405 (6%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P +A PL GLTFA+KD+FDV G+ TG GNP T+TAP V +L GA +
Sbjct: 18 PVPNAANGPLRGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLLDAGAAFV 77
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GK DE+A+S+NG+N HYG P N APDR+ GGSSSGSA AV KL DF+LGTDTGGSV
Sbjct: 78 GKVHTDELAFSMNGQNHHYGGPYNGAAPDRITGGSSSGSASAVSNKLCDFALGTDTGGSV 137
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R PAS+CG+FG RPSH +S +P+ ++ DT G+FA D RV VLL AD L
Sbjct: 138 RAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLLG-ADANPL 196
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
+++ A D +L + + + +E + G + V D+
Sbjct: 197 PSRPRLLLAADLFELPTPEARKALAPATARIEAVLGKASPVD------VADR-------- 242
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
L+ L A R +Q +E G + LGP ++ R + +A
Sbjct: 243 ------------PLSDLYWAFRYVQGWEAWRADGALIENYGLQLGPDVAGRFAFSKEVTA 290
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ + +V+ E A L LLG GIL++PT+P P ALE +R A L +
Sbjct: 291 AQFEKSSAVRREFTAHLGCLLGQDGILLLPTMPDIAPLRTTPMEALEDYRTTAAHTLCLT 350
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
++GF Q+S+PL D P+ +SL+ GSD L+ + ETL +
Sbjct: 351 PLTGFPQLSLPLSGRDGAPLGVSLIGPMGSDRSLIAVAETLMTAI 395
>gi|410617704|ref|ZP_11328669.1| amidase [Glaciecola polaris LMG 21857]
gi|410162835|dbj|GAC32807.1| amidase [Glaciecola polaris LMG 21857]
Length = 404
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 199/403 (49%), Gaps = 35/403 (8%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
++ LPLSG+T A+KD+F + G T GNPDW +H A T+P V +L GA +GKT
Sbjct: 27 TSSNLPLSGMTLAVKDLFHIKGLPTTAGNPDWLASHPIAEHTSPVVDKLLQQGAALVGKT 86
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
I DE+AYS+NG+N HYGTP N +P+R+PGGSSSGSAVAV LGTDTGGS+RVP
Sbjct: 87 ITDELAYSLNGQNIHYGTPFNVSSPERLPGGSSSGSAVAVREGSAVIGLGTDTGGSIRVP 146
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA-----DDV 196
ASY G+FG RP+H +S ++ +A SFDTVGW D L V VL + ++
Sbjct: 147 ASYNGLFGLRPTHGRISCEHMVGLAPSFDTVGWMTRDLDSLCAVADVLFTDSFSNGLPNI 206
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
L +P ++S P + ++ + + E L + D +
Sbjct: 207 QLKKP----------RISLSPELMAQCEYSQVLDAAYHAMVNEPCPLTSGLSDTL----- 251
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
L+ S R+LQ YE HG W+T +P I +R
Sbjct: 252 ---------------LSQASETFRILQGYEIWQTHGQWITEHQPKFAVDIQQRFTWCATI 296
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
+ ++ + A ++ L ++ +PT PGP P L L +R L
Sbjct: 297 NLRQYQQALVQQQIFIAHINDLFTQCDMIFLPTTPGPAPFLNTPGDELTTYRNTLMRLTC 356
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
IAG+ G Q+ +PL ++ + P+ SL+ + D L+ + L
Sbjct: 357 IAGLCGLPQLHVPLAINPHAPMGFSLIGQKNHDKQLIGIARML 399
>gi|398808822|ref|ZP_10567680.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
gi|398086831|gb|EJL77438.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
Length = 392
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 214/402 (53%), Gaps = 29/402 (7%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P A PL L+FA KD+FDV G+ TG GNP T TAP V +L GA
Sbjct: 17 PVPRAATGPLVDLSFAAKDLFDVAGYPTGGGNPIVLAMSGIKTRTAPTVQKLLDAGARFA 76
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT+ DE+A+S+NG N H+G P N AP R+ GGSSSGSA AV + L DF+LGTDTGGSV
Sbjct: 77 GKTVTDELAFSMNGNNAHFGAPVNGGAPLRIAGGSSSGSASAVSSNLCDFALGTDTGGSV 136
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R PA++CG++G RP+H VS G + +A SFDT GWFA D RV VLL AD L
Sbjct: 137 RAPANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDVGTFARVADVLLG-ADAATL 195
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
+++ +D L+ + QG V+ L G P+
Sbjct: 196 PERVRLLRPDDVWALAVPAAADALQGAAGRVQDLLG-----------------PA----- 233
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VWEAVRTS 317
+ ++ S A+ R LQ E G + P LGPG++ER W T
Sbjct: 234 ----QGTTVALESFDAMYWHFRYLQSREAWLTDGPLIERYAPPLGPGVAERFAWSREVTD 289
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
AQ + + +T RA L+ LLG G+L++PT+P P +++E +R RA +L I
Sbjct: 290 AQ-VTTARIFRTAFRAHLTHLLGTDGVLLLPTMPDIAPLRSDSEASMEDYRNRAIRMLCI 348
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
AG++GF Q+SIPL + P+ ISLL GSD L+ L + +
Sbjct: 349 AGLAGFPQLSIPLATREGAPLGISLLGPAGSDRSLVALAQRI 390
>gi|359789501|ref|ZP_09292446.1| amidase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254639|gb|EHK57624.1| amidase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 437
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 218/420 (51%), Gaps = 17/420 (4%)
Query: 12 MEKFVLQPSSS---AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
+ F+ P +S A PL+GL A+KDIFDV G+ TG GNP + A TAPAV
Sbjct: 8 LNAFLDLPQASVPHAKSGPLAGLRLAVKDIFDVAGYKTGCGNPQRYEDAAPAEKTAPAVQ 67
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
+L GA +GKT DE+A+S+ G+N H+ P NP APDRV GGSSSGSA AV L D
Sbjct: 68 VILDAGAEFVGKTQTDELAFSLMGQNAHFPHPVNPSAPDRVTGGSSSGSAAAVAGGLADI 127
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
+ G+DTGGS+R PAS+CG+ G R +H +S G +P+A S DT GWFA D +V V
Sbjct: 128 ATGSDTGGSIRAPASFCGLIGLRTTHGRISLDGTMPLAPSLDTFGWFARDIGTYEKVAAV 187
Query: 189 LL---QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL------FGGHIIE 239
+L ++D P V E PS R ++G K + ++
Sbjct: 188 VLGAAPISDAGAAPHPLPVKDGERGAPTLVTPSPRPSRGEGKGEGQFTVLTNPLRLAALD 247
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAA----LSSAMRLLQRYEFKNNHGDWV 295
+++LG + + ++ E + P+L+ L R LQ YE HGDW+
Sbjct: 248 SLVLGPIEAAEYRRMTAIVAAVIGEPA-TAPALSHSIDDLYWCFRKLQAYEAWAAHGDWI 306
Query: 296 TTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP 355
LGPG+ ER ++ + RA L+ALLG G+LV+PTVP P
Sbjct: 307 LQRDRGLGPGVRERFEFGSTLDSEVAAAETQRRNAFRAELAALLGQDGVLVLPTVPSAAP 366
Query: 356 KLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
L+ +R RA LL ++G+SGF Q+++P+G P ISLL GSD L+ L
Sbjct: 367 LKDSPAEDLQAYRERALRLLCLSGLSGFPQITLPIGEVHGAPFGISLLGPAGSDLALIKL 426
>gi|261855471|ref|YP_003262754.1| amidase [Halothiobacillus neapolitanus c2]
gi|261835940|gb|ACX95707.1| Amidase [Halothiobacillus neapolitanus c2]
Length = 391
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 197/392 (50%), Gaps = 37/392 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL +KD+FD+ G T GNPDW TH+ TAPAVL ++ GA + KT+ DE+A
Sbjct: 23 LCGLRVGVKDLFDIAGIPTSAGNPDWLATHAVPEHTAPAVLQLMHAGAHIVAKTLTDELA 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+NG N HYGTP N +P+R+PGGSSSGSA V L D LGTDTGGS+RVP+SY G+
Sbjct: 83 YSLNGINTHYGTPINAASPERLPGGSSSGSAAMVAHGLADIGLGTDTGGSIRVPSSYNGL 142
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG RP+H +S ++ +A SFDTVGW D L V VLL + L +
Sbjct: 143 FGLRPTHGVISVEHMVGLAPSFDTVGWMTRDLGTLADVADVLLPEQQPIELKNLCILKPQ 202
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
DCL+ L S G + E++ E
Sbjct: 203 IDCLE---------DWDLRASAWLATNGPLFESI-----------------------HEV 230
Query: 268 SIP-SLAALSS-AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-WEAVRTSAQKIDVC 324
+P SL L+S R+LQ E + HG WV+ +P I ER+ W TS Q I+
Sbjct: 231 VVPRSLLQLASQTFRILQGAEIWHTHGAWVSEARPRFAADIRERMNWCQSITSVQ-IEQA 289
Query: 325 QSVKTELRAALSALL-GDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
+ E+ LS L G+H + ++PT PG P L L +R L ++AG+S
Sbjct: 290 ARDRIEITQILSHWLDGEHTLAILPTTPGAAPLLTESAECLADYRVALMGLTALAGLSSR 349
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
Q+ +P+ P +SL+ +D L+ L
Sbjct: 350 PQLHLPVLSDHGAPWGLSLIGHRNTDRSLIGL 381
>gi|407782720|ref|ZP_11129930.1| amidase [Oceanibaculum indicum P24]
gi|407205378|gb|EKE75351.1| amidase [Oceanibaculum indicum P24]
Length = 391
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 211/395 (53%), Gaps = 28/395 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGL+FA KD+FDV GH TG GN DWA+ + T+ A V A+L GAT IGKTI DE+
Sbjct: 23 PLSGLSFAAKDLFDVAGHPTGGGNHDWAKNYRVPTAHAWTVQALLDAGATLIGKTITDEV 82
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
+ I GE+ + GTP N APDRVPGGSSSGSA AV A L D +LGTDTGGSVRVP+S+CG
Sbjct: 83 SLGIFGESAYDGTPLNSAAPDRVPGGSSSGSAAAVAAGLCDTALGTDTGGSVRVPSSFCG 142
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+H VS AG++P A S DT GWFA D RV VLLQ A L P++++
Sbjct: 143 LYGIRPTHGRVSVAGLMPQAPSSDTAGWFARDAATFARVSAVLLQEAIPEAL--PTKLLI 200
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A D + + +V+ + L G E V++
Sbjct: 201 ATDAFGFADEALAAALRPMVERLSSLLGAS--EEVLM----------------------- 235
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ P L+ A R+LQ YE W+ + P L ++ + + + ++ +
Sbjct: 236 -APPGLSVWGRAQRVLQPYEAWQTFQPWLESANPRLAFTVARGLIAGSQVTQEERNWANL 294
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
++ E+R L LL IL +PT P P P + R R L + G++G QV
Sbjct: 295 MRQEVRGRLRYLLPAGTILCLPTTPFPAPLRGRSVPDQQADRDRILCLCAHGGLAGMPQV 354
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++P + D LP+ +S+L G+D L+ + + +
Sbjct: 355 NLPGSMVDGLPIGLSVLGGPGTDATLIAVAKAMEE 389
>gi|430810132|ref|ZP_19437247.1| amidase [Cupriavidus sp. HMR-1]
gi|429497366|gb|EKZ95899.1| amidase [Cupriavidus sp. HMR-1]
Length = 396
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 212/405 (52%), Gaps = 27/405 (6%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P +A PL GLTFA+KD+FDV G+ TG GNP T+TAP V +L GA +
Sbjct: 18 PVPNAASGPLHGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLLDAGAAFV 77
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GK DE+A+S+NG+N HYG P N APDR+ GGSSSGSA AV KL DF+LGTDTGGSV
Sbjct: 78 GKVHTDELAFSMNGQNHHYGGPYNGTAPDRITGGSSSGSASAVSNKLCDFALGTDTGGSV 137
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R PAS+CG+FG RPSH +S +P+ ++ DT G+FA D RV VLL AD L
Sbjct: 138 RAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLLG-ADANPL 196
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
+++ A D +L + + + +E + G + V D+
Sbjct: 197 PSQPRLLLAADLFELPTPEARKALAPAAARIEAVLGKASPVD------VADR-------- 242
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
L+ L A R +Q +E G + LGP ++ R + +A
Sbjct: 243 ------------PLSDLYWAFRYVQGWEAWRADGALIENYGLQLGPDVAGRFAFSKEVTA 290
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ + +V+ E A L LLG GIL++PT+P P ALE +R A L +
Sbjct: 291 AQFEKSSAVRREFTAHLGRLLGQDGILLLPTMPDIAPLRTTPMEALEDYRTTAAHTLCLT 350
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
++GF Q+S+PL D P+ +SL+ GSD L+ + ETL +
Sbjct: 351 PLTGFPQLSLPLSGRDGAPLGLSLIGPMGSDRSLIAVAETLMTAI 395
>gi|354596671|ref|ZP_09014688.1| Amidase [Brenneria sp. EniD312]
gi|353674606|gb|EHD20639.1| Amidase [Brenneria sp. EniD312]
Length = 395
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 205/388 (52%), Gaps = 30/388 (7%)
Query: 23 AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
A Q PLSG TFA+KD+FDV G+ TG G+P TAP V +L GA +GKT
Sbjct: 19 APQGPLSGFTFAVKDLFDVAGYPTGGGSPHILAMSGIKRRTAPTVRRLLDAGAEFVGKTH 78
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
+EMA+S++G+N HYGTP N AP+R+PGGSSSGSA AV +L DF+LGTDTGGS+R PA
Sbjct: 79 TNEMAFSMSGKNAHYGTPRNGAAPERIPGGSSSGSAAAVSNRLCDFALGTDTGGSIRTPA 138
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
SYCG+FG RPSH +S P+A S DT G+F D + RVG LL DD L +
Sbjct: 139 SYCGLFGLRPSHGRISLDDCQPLAPSMDTAGYFTRDADLFERVGECLLG-EDDAPLPPQA 197
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
Q + + L S + + ++S+ KD L E
Sbjct: 198 QWVISHALFDLLPAASQQALRPALESI------------------KDVAGELSPLSGE-- 237
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VWEAVRTSAQKI 321
+P+L A R +Q E G+ +T LGP ++ R W A T Q
Sbjct: 238 ------LPALEEAYWAFRFIQGREAWLTQGEKITRYGFALGPDVAGRFAWGAGVTDEQYQ 291
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ C+ V+ R A ALLG+ ILV+PTVP P L +E R + LLSIA +
Sbjct: 292 NACR-VRERFRDAWQALLGNR-ILVLPTVPDIAPLLDARDEDIEQTRQLSHHLLSIAVLC 349
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSD 409
G Q+++PL + P+ ISL+ GSD
Sbjct: 350 GIPQLNLPLTYKEGAPLGISLIGPRGSD 377
>gi|347820309|ref|ZP_08873743.1| amidase [Verminephrobacter aporrectodeae subsp. tuberculatae At4]
Length = 400
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 208/394 (52%), Gaps = 29/394 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+ L F +KD+FDV G+ TG GNP T +AP V +L GA GKT+ DE
Sbjct: 26 PLTDLRFGVKDLFDVAGYPTGGGNPILLALSGIKTRSAPTVQKLLDAGARFAGKTVTDEF 85
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+NG N H+G P N A +R+ GGSSSGSA V + L DF+LGTDTGGSVR PA++CG
Sbjct: 86 AFSMNGNNAHFGAPLNGAARERITGGSSSGSASVVSSGLCDFALGTDTGGSVRAPANHCG 145
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+H VS G + +A SFDT GWFA D RV VLL AD L + ++++
Sbjct: 146 LYGLRPTHGRVSLEGALDLAPSFDTCGWFARDVGSFARVADVLLG-ADAKPLPQRPRLLW 204
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+D + P G + V+ L G +V+L
Sbjct: 205 PKDIWAMLEAPVRDALDGTAQRVQSLLGPATPLDVVL----------------------- 241
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VWEAVRTSAQKIDVCQ 325
S A+ R LQ E G + P LGP ++ER W T AQ ++ +
Sbjct: 242 ---ESWDAMYWNFRYLQGREAWLTDGPLIERYAPPLGPDVAERFAWSRAVTDAQ-VNTAR 297
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ + + RA L+ LG G+L++P++P P S+LE +R RA +L +AG+ GF Q
Sbjct: 298 AFRLDFRARLAQTLGSDGVLLMPSMPDIAPLRNATGSSLEDYRNRAIRMLCLAGLGGFPQ 357
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+S+PL P+ ISLL G+D L+ L + +
Sbjct: 358 LSMPLAQRAGAPLGISLLGPAGADRSLVALAQRI 391
>gi|358460540|ref|ZP_09170722.1| Amidase [Frankia sp. CN3]
gi|357076239|gb|EHI85716.1| Amidase [Frankia sp. CN3]
Length = 558
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 214/395 (54%), Gaps = 25/395 (6%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+ A Q PL GLT A+KD+F V GH G GNP W + A APAV A+L+ GA G
Sbjct: 180 AGADQGPLRGLTVAVKDLFAVAGHRAGAGNPAWLAEAAPAAEHAPAVAALLAAGADVTGL 239
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
DE+AYS++G N HYGTP NP AP +PGGSSSG A AV LVD LGTDTGGSVRV
Sbjct: 240 AQTDELAYSLSGTNVHYGTPPNPTAPGVIPGGSSSGPASAVALGLVDVGLGTDTGGSVRV 299
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PASYCG+FG RP+H AVS AGV+P+A SFDTVGW D L RVG VLL AD
Sbjct: 300 PASYCGLFGIRPTHGAVSAAGVVPLAPSFDTVGWLTRDAATLARVGAVLLPPADPALPAP 359
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
++ A+D + L+ + G V S+ D +VP++
Sbjct: 360 -GALLVADDLVALAEPDTAAALAGAVPSLAAAV-----------DLPVRRVPAI-----A 402
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+ +++ + A R Q +E HG WV LGPGI+ R A + ++
Sbjct: 403 AGRLRDWFL--------AFRHGQGFEANQAHGAWVAAHPGVLGPGIAGRFAGAAAVTDEE 454
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+ ++V+ ++RA L A LG +LV+P GP P + + A + RA +L AG+
Sbjct: 455 LTTARAVRAQVRATLGAALGTGAVLVVPATSGPAPAIDLAVEAKDRLRAATLTLTCAAGL 514
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+G V +PL L PV ++L+ G+D LL L
Sbjct: 515 AGLPVVVLPLLLVRGRPVGLALIGAPGTDHALLAL 549
>gi|390449988|ref|ZP_10235586.1| amidase [Nitratireductor aquibiodomus RA22]
gi|389663123|gb|EIM74660.1| amidase [Nitratireductor aquibiodomus RA22]
Length = 395
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 217/419 (51%), Gaps = 35/419 (8%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
M RD+ AF++ + P ++ + PL+GLT +KDIFDV G+ TG GNP A HS A
Sbjct: 2 MKMRDT-LNAFLD-YPDAPPPASGEGPLAGLTLGVKDIFDVAGYPTGGGNPRRAEIHSRA 59
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
T P + ++L GA IGKT DE+ +S+ G+N HY P N AP R GGSSSGSA A
Sbjct: 60 PDTTPPIQSLLDAGARFIGKTQTDELTFSMIGQNAHYPAPVNRAAPQRFTGGSSSGSAAA 119
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK 180
V L D + G+DT GS+R PASYCG+ G R +H + G +P+A SFDT GWFA D
Sbjct: 120 VAGGLADIAAGSDTNGSIRAPASYCGLIGLRTTHGRIPLDGAMPLAPSFDTFGWFARDAA 179
Query: 181 ILNRVGRVLL-QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE 239
RVG VLL D +L RP ++ E L E+ G ++
Sbjct: 180 TYARVGEVLLGNDPYDDDLARPVRIPEFEAL--------------LFGEKERAVYGTMLS 225
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEY-SIP-SLAALSSAMRLLQRYEFKNNHGDWVTT 297
V+ HF ++E + ++P S L R++Q +E HGD++ +
Sbjct: 226 TVV------------HHF----DREAAFLALPGSPEQLFECFRIIQTFEAWEVHGDFIRS 269
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
KP+LGPG+ ER R SA + ++ + + +AL +LV+PT P P
Sbjct: 270 AKPELGPGVRERFEFGSRISAATVAGARAERRRFQQDFAALFDHDMVLVMPTQPTAAPLK 329
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
L+ +R A L +IAG+ G+ +++IPLG P ISLL GSD L+ L
Sbjct: 330 SATQEELDRYRGLALKLTAIAGLLGWPEITIPLGQVHGAPFGISLLGPAGSDRQLIRLA 388
>gi|402850118|ref|ZP_10898330.1| hypothetical protein A33M_3273 [Rhodovulum sp. PH10]
gi|402499607|gb|EJW11307.1| hypothetical protein A33M_3273 [Rhodovulum sp. PH10]
Length = 399
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 204/420 (48%), Gaps = 48/420 (11%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+ + P + A PL+GLT A+KD++DV G TG G+P W H A A V
Sbjct: 8 AFVPHDLTAPVTGASTGPLAGLTAAVKDMYDVAGTRTGGGSPAWLAAHPPAERNAGLVEK 67
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L GAT +GKT+ DE YS+ G N HYGTP NP AP R+PGGSSSGSA A + + D +
Sbjct: 68 LLGAGATIVGKTVCDEFFYSVAGTNAHYGTPVNPRAPGRIPGGSSSGSASAAASGVCDVA 127
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LG+DTGGSVR+PA++CG++G RP+ + +G + MA SFD GW A P + +VG VL
Sbjct: 128 LGSDTGGSVRIPAAFCGLYGLRPTLGRMDLSGAMAMAPSFDVPGWMAAGPGVFAKVGDVL 187
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L + P D+V ++L D
Sbjct: 188 LS-------------------GSAARTPVDKV-------------------IVLDDAFAQ 209
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLA----------ALSSAMRLLQRYEFKNNHGDWVTTVK 299
P + FL E ++P ++ A R++Q +E G +V +
Sbjct: 210 ADPEVAAFLEETLAAMGDALPKMSHGAIAPEGFDVWREAFRVVQAFEVWKTFGAFVESKN 269
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
P GPG+ ER A + +A++ D + VK + + +L +PT P P+
Sbjct: 270 PAFGPGVRERFETAAKITAEEADAARVVKRNATEWIHGVAAPGTVLALPTAPCIAPRADE 329
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+E FR R L AG+SG QV+IP G P+ +S + G+D LL L TL
Sbjct: 330 PADYMESFRVRVMRLTCTAGISGLPQVTIPAGTISGCPIGLSFIGWPGADEILLELAVTL 389
>gi|83310767|ref|YP_421031.1| amidase [Magnetospirillum magneticum AMB-1]
gi|82945608|dbj|BAE50472.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Magnetospirillum magneticum AMB-1]
Length = 391
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 205/397 (51%), Gaps = 35/397 (8%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+ A PL+GLTFA KD+FDV G+VTG GNPDW R A TA A+ +L GA +GK
Sbjct: 17 NGAETGPLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPAKHTAWAIGTLLESGARLVGK 76
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T DE+ I G+N HYGTP NP AP VPGGSSSGSA AV L +LGTDT GS RV
Sbjct: 77 THTDELTRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLCSMALGTDTAGSTRV 136
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PAS+CG+FG RP+ + GV+ + +FDTVG A DP+IL ++G LL+ + R
Sbjct: 137 PASFCGVFGLRPTLGTIPMDGVLSQSNTFDTVGLLADDPEILAKMGEALLR--KKIKDTR 194
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLV----KSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
P+QV+ ED L+ S + + ++V + G + V L D+V
Sbjct: 195 PAQVVVLEDALEASDPAVAAAIEAALPRIKEAVAPIVRGRKLSPVPLADWV--------- 245
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
E + +I Q E G+W+ P G +++ +
Sbjct: 246 -------EHQNAI-------------QGREAWETFGEWINNSNPRFGFEVADNFLRGSKV 285
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
S + + + + + + L + +LV+PT P P + S + R R SL +
Sbjct: 286 SQRTLSAARGFRLRAKRWVQEALEGNAMLVLPTTPVTAPPVHSPRSVMWEIRHRIVSLTT 345
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
IAG++G Q+S+PL D LPV +SL+ GSD LL
Sbjct: 346 IAGMAGCPQISLPLCKVDGLPVGLSLIGPRGSDALLL 382
>gi|412987786|emb|CCO19182.1| amidase [Bathycoccus prasinos]
Length = 669
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 232/475 (48%), Gaps = 57/475 (12%)
Query: 6 SDYGAFME--KFVLQPSSSAHQL-PLSGLTFAIKDIFDVDGHV------TGFGNPDWART 56
D GAF+E P H + L+ L F +KDIF+V G GFG+P W
Sbjct: 45 KDCGAFVEIVDIPCPPPPEKHVVRKLANLKFVLKDIFEVSGRKGENDSSCGFGSPKWKEF 104
Query: 57 HSAA---------------TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPT 101
A + +L GA+ +G T MDE+AYSI+G+N+HYGTP
Sbjct: 105 MKEKRENSNSNGNNAGVHRVKNAAIMDMLLKNGASLVGITHMDELAYSIDGQNEHYGTPI 164
Query: 102 NPCAPDRVPGGSSSGSAVAVGAKL--VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVST 159
NP A R+PGGSSSGSAVAV ++L DF +GTD+ GSVRVPA+YCG++GFRPSH VST
Sbjct: 165 NPAADKRLPGGSSSGSAVAVASRLRDCDFGIGTDSAGSVRVPAAYCGVYGFRPSHGMVST 224
Query: 160 AGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADD--VNLVRPSQVIFAEDCLQLSSIP 217
G A++FDTVGWFA K L VG VLL+ ADD + P Q D ++L
Sbjct: 225 KGCQDFAKTFDTVGWFAKGSKTLKDVGDVLLKPADDEKYGIKEPKQFAILTDLMKL---- 280
Query: 218 SDRVTQGLVKSVEKLFG-----GHIIENVILGDYVKDKVPSLQHFLS-----EGNKEQEY 267
+D V S K FG + + LG+ +K PSL+ S E +++ +
Sbjct: 281 ADPQGSAAVASALKAFGYDDRYAGKVSKLDLGERLKMLCPSLRTDTSGKTGLELIRDKMH 340
Query: 268 SIPSL---AALSSAMRLLQRYEFKN----------NHGDWVTTVKPDLGPGISERVWEAV 314
+ AL + L++ + + ++ TT LG ++R+ A
Sbjct: 341 ATMGFEIHEALKEFLAFLEKQDGSDQATATATATISNKTTTTTTTSGLGKFTAQRIENAK 400
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFS 373
+ + Q + V+ E+R + ++ + +L+ PTVPG P + ++ +R + F
Sbjct: 401 KITEQDYENLMKVRGEIREVMDQIMDNGTVLIFPTVPGVAPMREGRSEEEVQAWRMKTFQ 460
Query: 374 LLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
L+IA G QV+IPL D P ++SLL +D LL ++E
Sbjct: 461 FLAIASFCGLPQVAIPLRYPDAEGPHSVSLLGGFQTDKMLLECAFRYSAQMQEHF 515
>gi|397164901|ref|ZP_10488356.1| amidase family protein [Enterobacter radicincitans DSM 16656]
gi|396094049|gb|EJI91604.1| amidase family protein [Enterobacter radicincitans DSM 16656]
Length = 389
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/415 (39%), Positives = 218/415 (52%), Gaps = 34/415 (8%)
Query: 7 DYGAFME-KFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
D AFM FV P + + PLSGLTFA KD+FDV G+ TG GNP T+TAP
Sbjct: 3 DPRAFMPYPFVAVPQAESG--PLSGLTFAAKDLFDVAGYPTGGGNPHVLAASGIKTTTAP 60
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
AV +L GGA +GKT E+AYS++G N HYGTP N AP R+PGGSSSGSA AV L
Sbjct: 61 AVQMLLDGGARFVGKTHTSELAYSMSGHNIHYGTPRNGAAPLRIPGGSSSGSASAVSNGL 120
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
D +LGTDTGGSVR PASYCG+FG RP+H +S AG P+ + DT G+FA P+ +
Sbjct: 121 CDIALGTDTGGSVRTPASYCGLFGLRPTHGRISLAGCQPLCATMDTCGFFARTPQAFSAA 180
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
L L DD P+Q+ A +++P Q L+ EKL H E +L
Sbjct: 181 ASCL--LGDDT--FTPAQIELACHEALFAALPPHS-QQALLPVREKL-AQHFGEIALL-- 232
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
+ +P A+ +A R +Q YE + G + + LGP
Sbjct: 233 --------------------DAPLPEREAVYTAFRQIQGYEAWQSQGHNIERLGMQLGPD 272
Query: 306 ISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
++ER + T A+ CQ ++ A LGD IL++PTVP P L P +
Sbjct: 273 VAERFAYGKAVTEAEFAAACQ-LREAFTAWWQTQLGDR-ILLLPTVPDAAPLLTAAPEEI 330
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
E R + LL IA ++ QV+IP+ D P+ ISL+ GSD L+++ T
Sbjct: 331 EATRRISHDLLLIAVLTRRPQVNIPVTTIDGAPLGISLIGPCGSDALLVSMATTF 385
>gi|23499864|ref|NP_699304.1| amidase [Brucella suis 1330]
gi|376278087|ref|YP_005108120.1| amidase [Brucella suis VBI22]
gi|384222649|ref|YP_005613814.1| amidase [Brucella suis 1330]
gi|23463436|gb|AAN33309.1| amidase [Brucella suis 1330]
gi|343384097|gb|AEM19588.1| amidase [Brucella suis 1330]
gi|358259525|gb|AEU07258.1| amidase [Brucella suis VBI22]
Length = 401
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 220/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK MDE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQMDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|239813857|ref|YP_002942767.1| amidase [Variovorax paradoxus S110]
gi|239800434|gb|ACS17501.1| Amidase [Variovorax paradoxus S110]
Length = 393
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 212/402 (52%), Gaps = 29/402 (7%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P A PL+ L FA KD+FDV G+ TG G+P T TAP V +L GA
Sbjct: 17 PVPHAPTGPLADLRFAAKDLFDVAGYPTGGGSPIVLAMSGIKTRTAPTVQKLLDAGARFA 76
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT+ DE+A+S+NG N H+G P N A DR+ GGSSSGSA AV + L DF+LGTDTGGSV
Sbjct: 77 GKTVTDELAFSMNGNNAHFGAPINGAAKDRITGGSSSGSASAVSSGLCDFALGTDTGGSV 136
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R PA++CG++G RP+H VS G + +A S DT GWFA D RV VLL AD L
Sbjct: 137 RAPANHCGLYGLRPTHGRVSLEGALDLAPSLDTCGWFARDIGTFARVADVLLD-ADTAAL 195
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
P++V P D + + + + L +LGD
Sbjct: 196 --PARVRLLR--------PEDVWSLAVPAAADALADAAARAQRVLGDAAG---------- 235
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER-VWEAVRTS 317
E ++ S A+ R +Q +E G + P LGPG++ER W T
Sbjct: 236 ------IEVALDSFDAMYWNFRYVQSHEAWLTDGPLIERYAPPLGPGVAERFAWSRGVTD 289
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
AQ I ++ +T R+ L+ LLG G+L++PT+P P + LE +R RA +L I
Sbjct: 290 AQ-IAAGRAFRTSFRSHLAKLLGSDGVLLMPTMPDIAPLRSEGEAGLEDYRNRAIRMLCI 348
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
AG++GF Q+S+PL P+ ISLL GSD L+ L E +
Sbjct: 349 AGLAGFPQLSMPLAQRHGAPLGISLLGPAGSDRSLIGLAERI 390
>gi|407780206|ref|ZP_11127451.1| amidase [Nitratireductor pacificus pht-3B]
gi|407297973|gb|EKF17120.1| amidase [Nitratireductor pacificus pht-3B]
Length = 416
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 222/417 (53%), Gaps = 35/417 (8%)
Query: 3 SRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
+RD+ AF++ + +P SA PL+GLT +KD++DV G+ TG GNPD A
Sbjct: 25 TRDT-LNAFLD-YPERPVLSATGGPLAGLTMGVKDMYDVAGYPTGGGNPDRETVSGPAAE 82
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
TAPA+ A+L GA +GKT DE+ YS+ G N H+ P N AP RV GGSSSGSA AV
Sbjct: 83 TAPAIQALLDAGARFLGKTQTDELTYSMIGMNAHFPAPVNRAAPQRVTGGSSSGSAAAVA 142
Query: 123 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKIL 182
L D ++G+DT GS+R+PAS+CG+ G R +H + G +P+A SFDT+GWFA D +
Sbjct: 143 GGLADIAVGSDTNGSIRIPASFCGLLGLRTTHGRIPLTGAMPLAPSFDTLGWFAADSTVY 202
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
+VG VLL ED + L K V +E+++
Sbjct: 203 AKVGEVLL----------------GEDTHKTP----------LAKPVRL----EALESLL 232
Query: 243 LGDYVKDKVPS-LQHFLSEGNKEQEY-SIPSLA-ALSSAMRLLQRYEFKNNHGDWVTTVK 299
G+ ++ + L+ + +++ + ++P L R +Q +E HG ++T K
Sbjct: 233 FGEQEREAYAAMLRQVVRHFDRQPAFLALPEPPDVLFGHFRAIQAFEAWQAHGSFITQAK 292
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
P LGPG+ ER A + ++ + + L+ SAL D +LV+PT P P
Sbjct: 293 PVLGPGVRERFAYARGIGNEALENARHGRRRLQQEFSALFDDDMVLVLPTQPTAAPLKSA 352
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
L+ +RARA +L + AG+ G+ Q+SIP+G + P ISLL GSD L+ L
Sbjct: 353 TLEELDSYRARALTLTAFAGLLGWPQISIPVGQVHDAPFGISLLGPAGSDRQLIRLA 409
>gi|239834477|ref|ZP_04682805.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum
intermedium LMG 3301]
gi|444310065|ref|ZP_21145692.1| amidase [Ochrobactrum intermedium M86]
gi|239822540|gb|EEQ94109.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum
intermedium LMG 3301]
gi|443486517|gb|ELT49292.1| amidase [Ochrobactrum intermedium M86]
Length = 395
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 218/424 (51%), Gaps = 39/424 (9%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
MAS D + A + K +P A + PL G A+KDI+DV G VTG GNP A
Sbjct: 1 MASFDP-FNAIIAK-AEKPPVHALEGPLEGERLAVKDIYDVAGMVTGCGNPQIEAESPRA 58
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
+AP V +L+ GA +GK DE+A+S+ G+N H+ P NP APDRV GGSSSGSA A
Sbjct: 59 ERSAPVVERLLAAGAEFVGKAQTDELAFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAA 118
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK 180
V KL D +LG+DTGGS+R PAS+CG+ G R +H + G++P+A S DT+GWFA D +
Sbjct: 119 VAGKLADIALGSDTGGSIRAPASFCGLVGLRSTHGRIPLQGIMPLAPSLDTIGWFARDIE 178
Query: 181 ILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIEN 240
+ +RVG +LL DD ++ KL ++E
Sbjct: 179 LYDRVGAILL--GDDAREF----------------------------NLTKLLYMPVLEQ 208
Query: 241 VILGDYVKDKVPSL-----QHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWV 295
++LG+ D ++ HF G K S+ L R +Q E HG W+
Sbjct: 209 LLLGEAETDAYRAMFAEVRPHF--TGLKAASQPTLSIDELYLVFRHIQGAEAWATHGGWI 266
Query: 296 TTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP 355
++ LGPG+++R +A + + + + L ++G+ +L +PTVPG P
Sbjct: 267 SSGDRKLGPGVADRFAFGAEIAADLVASQRLRRAQFTQELEKIIGNDAVLALPTVPGAAP 326
Query: 356 KLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+ L+ +R +A LL ++ +SG Q+++PLG + P IS + GSD L+ L
Sbjct: 327 LAKEPFETLQAYREQALRLLCLSVLSGLPQITLPLGQVQSAPFGISFIGPRGSDRALIAL 386
Query: 416 VETL 419
+
Sbjct: 387 ARNI 390
>gi|312198777|ref|YP_004018838.1| amidase [Frankia sp. EuI1c]
gi|311230113|gb|ADP82968.1| Amidase [Frankia sp. EuI1c]
Length = 574
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 203/383 (53%), Gaps = 26/383 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GLT A+KD+F V GH TG GNP W + APAV A+L+ GA G DE+
Sbjct: 195 PLRGLTVAVKDLFAVQGHRTGAGNPTWLAEAAPEPRHAPAVAALLAAGADVAGIAQTDEL 254
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS++G N HYGTP NP AP VPGGS+SG A AV LVD LGTDTGGSVRVPASYCG
Sbjct: 255 AYSLSGTNVHYGTPPNPTAPGVVPGGSTSGPASAVALGLVDVGLGTDTGGSVRVPASYCG 314
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FG RP+H AVS AGV+P+A SFDTVGW D L +VG VLL D P++++
Sbjct: 315 LFGIRPTHGAVSAAGVVPLAPSFDTVGWLTRDADTLAQVGAVLLPA--DPAAGAPTRLLV 372
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A+D LV + E G + V+ +P+ G + +
Sbjct: 373 ADD---------------LVAAAEPEV-GAALAAVLPALAAAVGLPTRHVPRVAGGRLDD 416
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ +A R Q +E HG WV LGPG++ R A + ++ Q
Sbjct: 417 W--------VTAFRQNQGWEANATHGAWVAAHPGTLGPGVAARFAAAAAVTEGQLRTAQR 468
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+T++R L A L +LV P P P++ + + RA +L S AG++G V
Sbjct: 469 VRTQVRDILGAALAGGTVLVAPASSSPAPRMDLAVDVKDRVRAATLTLTSGAGLAGLPVV 528
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
+P+ + PV ++L+ G+D
Sbjct: 529 VLPMLRVRDRPVGVALIGAAGTD 551
>gi|260757078|ref|ZP_05869426.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260882888|ref|ZP_05894502.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297249999|ref|ZP_06933700.1| amidase [Brucella abortus bv. 5 str. B3196]
gi|260677186|gb|EEX64007.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260872416|gb|EEX79485.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297173868|gb|EFH33232.1| amidase [Brucella abortus bv. 5 str. B3196]
Length = 401
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LGTDTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGTDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|404329658|ref|ZP_10970106.1| Amidase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 412
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 211/416 (50%), Gaps = 40/416 (9%)
Query: 8 YGAFME-KFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
+GAF++ + ++P SS L L FA KD+F V GH GNPDW +TH A A
Sbjct: 23 FGAFIQDQLFIKPKSSGM---LDHLIFAAKDVFAVSGHRNSAGNPDWEKTHRPAVRNAQV 79
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
+ +L GAT G T+ DE+ YS+ G+N HY NP PD GGSSSGSAVAV L
Sbjct: 80 IDRLLRSGATLRGMTVTDELMYSLRGDNIHYPPTINPRLPDAFSGGSSSGSAVAVAGGLA 139
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DF++GTDTGGSVR+P+SYCG+FG RPSH +VS GVIP+A SFDTVGW A +L +G
Sbjct: 140 DFAIGTDTGGSVRIPSSYCGLFGMRPSHGSVSLDGVIPLAPSFDTVGWMAGSSGLLQEIG 199
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
+ LL P Q I L D V V +V L +
Sbjct: 200 QCLL----------PEQEIGTFRHFYLLREAWDLVASSTVGTV-------------LNEA 236
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
V PS + YS P L LS R+LQ E +HG W+ P G I
Sbjct: 237 VFRYFPSGLEVCT-----LPYSSPEL--LSETFRILQGREAWQSHGAWIEKNHPRFGSDI 289
Query: 307 SERVWEAVRTSAQKIDVCQ---SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
+ R +EA Q DV + VK A+S LLG G++V+PT GP P +A
Sbjct: 290 AGR-FEAASQMKQD-DVWRHAAEVKRHFAEAMSRLLGQDGLIVLPTTFGPAPARTDSAAA 347
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
RA+ L IAGV+G Q++IP PV +S ++ G+D LL V L
Sbjct: 348 GGRVRAQTMKLTCIAGVAGLPQITIPFA-DQGRPVGLSFISGAGTDRQLLAFVHDL 402
>gi|153011561|ref|YP_001372775.1| amidase [Ochrobactrum anthropi ATCC 49188]
gi|151563449|gb|ABS16946.1| Amidase [Ochrobactrum anthropi ATCC 49188]
Length = 395
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 207/398 (52%), Gaps = 37/398 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G A+KDI+DV G TG GNP A +AP V +L+ GA +GK DE+
Sbjct: 25 PLKGERLAVKDIYDVAGMATGCGNPQIEAESPRAERSAPVVEKLLAAGAEFVGKAQTDEL 84
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+ G+N H+ P NP APDRV GGSSSGSA AV KL D +LG+DTGGS+R PAS+CG
Sbjct: 85 AFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRAPASFCG 144
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G R +H + G++P+A S DT+GWFA D + +RVG +LL +D R +Q+++
Sbjct: 145 LVGLRTTHGRIPLEGIMPLAPSLDTIGWFARDIDLYDRVGSILL--GNDAREFRLTQLLY 202
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL-----QHFLSEG 261
+P ++E ++LG D ++ HF G
Sbjct: 203 ---------MP-------------------VLEQLLLGQQETDAYRTMFAQVRPHF--SG 232
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
K S+ L R +Q E HG W+++ LGPG+++R +A +
Sbjct: 233 LKAASQPTLSIDELYLVFRHIQGAEAWATHGGWISSGDRKLGPGVADRFAFGAEIAADLV 292
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ + + L ++G+ +L +PTVPG P + L+ +R +A LL ++ +S
Sbjct: 293 ASQRMRRAQFTQELEQIVGNDAVLALPTVPGAAPLAKEPFETLQAYREQALRLLCLSVLS 352
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
G Q+++PLG P IS + GSD L+ L + +
Sbjct: 353 GLPQITLPLGQVQGAPFGISFIGPRGSDRALIGLAKNI 390
>gi|119469834|ref|ZP_01612672.1| amidase [Alteromonadales bacterium TW-7]
gi|119446817|gb|EAW28089.1| amidase [Alteromonadales bacterium TW-7]
Length = 402
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 199/405 (49%), Gaps = 40/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LS A+KD+F V GNP W +TH A TA +V ++ G G T DE+A
Sbjct: 29 LSTKRLAVKDVFAVKKQKNSAGNPCWFKTHPPAQQTASSVNNLMDAGCIFKGFTHTDELA 88
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV L D LGTDTGGS+R+PASYCG+
Sbjct: 89 YSLEGNNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGL 148
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG RPSH+ + G+IP+A FDT+GW ++L +VG VLL P+Q I +
Sbjct: 149 FGIRPSHNVIEKDGLIPLAPHFDTIGWLTQSAELLEKVGNVLL----------PNQAINS 198
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ L + + V+ L +++L +K P +H +E+
Sbjct: 199 VNTLVICEPLFELVSPALQAPLKQL--------------LKKTKPYFKH-------HKEF 237
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTTVK--PDLGPGISERVWEAVRTSAQKID 322
+P+ L+ L+ + R+LQ H DW+ + P P I+ R A+ + Q+
Sbjct: 238 ELPNISLLSELADSFRILQGRAIAKAHKDWLQLPEHPPQFAPAIAARFKMALALTDQEEK 297
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+V+T+ + ++ L L +PT P PKL D SAL R + +L +IAG+S
Sbjct: 298 EALNVQTQWQTLIAKNLNSTSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGLSR 354
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
QV +PL L P SL+ H +D LL L K+E
Sbjct: 355 SAQVHLPLANLASGHPYGFSLMMSHNNDKSLLACATQLAAYFKQE 399
>gi|261216740|ref|ZP_05931021.1| amidase [Brucella ceti M13/05/1]
gi|261319607|ref|ZP_05958804.1| amidase [Brucella ceti M644/93/1]
gi|260921829|gb|EEX88397.1| amidase [Brucella ceti M13/05/1]
gi|261292297|gb|EEX95793.1| amidase [Brucella ceti M644/93/1]
Length = 401
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPSGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|256014891|ref|YP_003104900.1| amidase [Brucella microti CCM 4915]
gi|261313788|ref|ZP_05952985.1| amidase [Brucella pinnipedialis M163/99/10]
gi|265987024|ref|ZP_06099581.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294853125|ref|ZP_06793797.1| amidase [Brucella sp. NVSL 07-0026]
gi|255997551|gb|ACU49238.1| amidase [Brucella microti CCM 4915]
gi|261302814|gb|EEY06311.1| amidase [Brucella pinnipedialis M163/99/10]
gi|264659221|gb|EEZ29482.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294818780|gb|EFG35780.1| amidase [Brucella sp. NVSL 07-0026]
Length = 401
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|452963960|gb|EME69012.1| amidase [Magnetospirillum sp. SO-1]
Length = 391
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 201/391 (51%), Gaps = 35/391 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GLTFA KD+FDV G+VTG GNPDW R A TA A+ +L GA +GKT DE+
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPARHTAWAIGTLLESGARLVGKTHTDEL 82
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
I G+N HYGTP NP AP VPGGSSSGSA AV L +LGTDT GS RVPAS+CG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLASMALGTDTAGSTRVPASFCG 142
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FG RP+ ++ GV+ + +FDTVG A DP IL R+G LL+ + VRP+QV+
Sbjct: 143 VFGLRPTLGSIPMDGVLSQSNTFDTVGLLADDPDILARMGEALLR--KKIKDVRPAQVVV 200
Query: 207 AEDCLQLSSIPSDRVTQGLV----KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
ED L S + + +V + G + V L D+V
Sbjct: 201 LEDALAASDPAVAAAIEAALPRIKDAVAPIVRGRRVSPVPLADWV--------------- 245
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E + +I Q E G+W+ P G +++ + S + +
Sbjct: 246 -EHQNAI-------------QGREAWERFGEWINNSNPRFGFEVADNFLRGSKVSNRTLS 291
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + R + L + +LV+PT P P + S + R R SL +IAG++G
Sbjct: 292 AARGFRLRARRWVQEALEGNAVLVLPTTPVTAPPVHSPRSVMWEIRHRIVSLTTIAGMAG 351
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
Q+S+PL LPV +SL+ GSD LL
Sbjct: 352 CPQISLPLCTAGGLPVGLSLIGPRGSDALLL 382
>gi|148558743|ref|YP_001257168.1| amidase [Brucella ovis ATCC 25840]
gi|148370028|gb|ABQ62900.1| amidase [Brucella ovis ATCC 25840]
Length = 401
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFSYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|359442241|ref|ZP_09232111.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20429]
gi|358035852|dbj|GAA68360.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20429]
Length = 400
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 203/407 (49%), Gaps = 44/407 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ A+KD+F V G GNP W +T A +TA +V +++ G IG T DE+A
Sbjct: 27 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELA 86
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV A L D LGTDTGGS+R+PASYCG+
Sbjct: 87 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 146
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RPSH+ + G+IP+A SFDT+GW ++LN VG VLL P+QVI
Sbjct: 147 YGIRPSHNVIEKEGLIPLAPSFDTIGWLTQSAELLNDVGNVLL----------PNQVINK 196
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ L + + V L LG ++ P H + ++
Sbjct: 197 VNTLVICEALFELVDPSL--------------QAPLGKLLEKTKPYFNHHI-------DF 235
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTTVKPD----LGPGISERVWEAVRTSAQK 320
+P L+ L+ R+LQ H DW+ PD P I+ R A+ + Q+
Sbjct: 236 KLPKSSLLSELADTFRILQGRAIAKTHRDWLEL--PDQLSHFAPAIAARFKMALALTEQE 293
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
++ E + ++ L H L +PT P PKL D SAL R + +L +IAG+
Sbjct: 294 EQEALKIQHEWQTIVAKNLNKHSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGL 350
Query: 381 SGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
SG QV +PL L ++ P SL+ HG+D LL V+ L K++
Sbjct: 351 SGSAQVHLPLADLTNDHPYGFSLMMTHGNDKSLLACVKHLAAHFKQD 397
>gi|237808703|ref|YP_002893143.1| amidase [Tolumonas auensis DSM 9187]
gi|237500964|gb|ACQ93557.1| Amidase [Tolumonas auensis DSM 9187]
Length = 400
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 208/408 (50%), Gaps = 37/408 (9%)
Query: 23 AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
A + PLS L KD++ V G+ TG GNP W TH A +T+P +L +++ G IG+
Sbjct: 20 ATEGPLSDLRLVYKDLYHVAGYPTGAGNPTWLNTHEPAAATSPVLLKLMNAGMQIIGRVQ 79
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
DE+AYS+NG N HYGTP NP APDR+PGGSSSGSAVAV D LGTDTGGS+RVPA
Sbjct: 80 TDELAYSLNGCNIHYGTPVNPAAPDRLPGGSSSGSAVAVARGDADVGLGTDTGGSIRVPA 139
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
Y G+FG RP+H +S+ ++P+A FDT GW D L RVG L A V R
Sbjct: 140 CYNGLFGIRPTHGRLSSEHMVPLAPRFDTPGWLCRDAATLERVGAQLFG-ATPVKTER-V 197
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+++A L +P D T +V ++L V SL
Sbjct: 198 DLLWATSLFDL--LPEDLCT-AIVPIKQQLAAC---------------VASLH------- 232
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK-- 320
E +++ L+ L++ R LQ E H WV+ I+ER A + +A+
Sbjct: 233 -EWDFAPARLSELNNTFRTLQGREVARTHSAWVSQHPDAFAADIAERFQWASQLTAEDEA 291
Query: 321 --IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ CQ K E+ A L + LVIPT P P + L FR + L ++A
Sbjct: 292 LAEETCQQWKAEIIARL-----ETACLVIPTTPDLAPLRSASDADLADFRMKLLGLTALA 346
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
G++G QV +PL +P S++ K GSD LL LV + + EE
Sbjct: 347 GLAGLPQVHLPLVKVAGVPFGFSIIGKPGSDMQLLALVRLFSDVIGEE 394
>gi|152994488|ref|YP_001339323.1| amidase [Marinomonas sp. MWYL1]
gi|150835412|gb|ABR69388.1| Amidase [Marinomonas sp. MWYL1]
Length = 411
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/418 (36%), Positives = 208/418 (49%), Gaps = 52/418 (12%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
Q SS+ LPLSGL A+KD+F + G T GNP W TH T TA +V A+LS GA
Sbjct: 25 QNSSADSALPLSGLRLAVKDLFHMAGLPTSAGNPTWLATHPIPTKTASSVSALLSEGAIF 84
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
GKTI DE+AYS+NG+N HYGTP+NP PDR+PGGSSSGSAVAV + L D LGTDTGGS
Sbjct: 85 CGKTITDELAYSLNGQNIHYGTPSNPVTPDRLPGGSSSGSAVAVSSGLADIGLGTDTGGS 144
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+RVPASY G+FG RP+H + + ++ +A SFDTVGW D L + RVLL+
Sbjct: 145 IRVPASYNGLFGLRPTHGVIPSDNMVALAPSFDTVGWLTKDLTTLEKTARVLLK------ 198
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD--YVKDKVPSLQ 255
K FG +I N ++ +VK+ L+
Sbjct: 199 -----------------------------SKFSKEFGNVLIANNLIDQVAHVKELRTQLK 229
Query: 256 HFLSEGNKEQEYSI---PSLAALSSAMRLLQRYEFKNNHGDWVTTV-----------KPD 301
+ +G+ +E SI S R LQ E + HG W+ ++ +
Sbjct: 230 TWREQGHFAKESSIVIDTKAWKTSETFRTLQGAEIWHEHGKWINSLNSSDSLSEAEKQSV 289
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
P I R SA + Q + L + + +L+IPT PG P
Sbjct: 290 FAPDIWLRFHWCKTISAADVATAQQQRQRFVDWLEHEI-EGSVLIIPTTPGLAPLFDAAE 348
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
L +R + + +IAG++G Q+ +P+ + D P +SL+ GSD L+ + L
Sbjct: 349 DELAAYRNQLMDITAIAGLAGLPQLHLPVCILDGAPCGLSLVGSKGSDLALIEFAKHL 406
>gi|84517181|ref|ZP_01004536.1| amidase [Loktanella vestfoldensis SKA53]
gi|84508856|gb|EAQ05318.1| amidase [Loktanella vestfoldensis SKA53]
Length = 392
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 206/416 (49%), Gaps = 34/416 (8%)
Query: 5 DSD-YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
D D + FM ++ + +A PL+GLT A+KDIFDV G+ TG G P A T
Sbjct: 4 DKDPFNCFMPYEAIRVAHAADG-PLAGLTLAVKDIFDVAGYRTGSGCPTRLAQSPVARKT 62
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
A A +L GA +GKT DE+A+S+ G N H+GTP NP APDR+PGGSSSGSAVAV
Sbjct: 63 ASAAQRLLDAGAQFVGKTHTDELAWSMYGMNAHFGTPVNPAAPDRIPGGSSSGSAVAVAG 122
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
L D ++G+DTGGSVR PAS+CGI+G RP+H V GV P+A S+D VG FA D L
Sbjct: 123 GLADIAIGSDTGGSVRAPASFCGIWGLRPTHGRVCLDGVQPLAPSYDAVGLFARDGATLA 182
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
R L L D + P+ V+ P+D + Q L + ++
Sbjct: 183 RAADAL--LGPDTAALPPNPVLLR---------PTDMIAQ-LAAEQQAIY---------- 220
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
+ F + ++ E +AA+ + K W+ L
Sbjct: 221 ----------VSVFGALQAQDVEVFPQGVAAVYDIFLTTISGDAKAAIVPWIKASGMPLV 270
Query: 304 PGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
GI RV A + + +I + + A + ALLGD G+L+ P VP P +L
Sbjct: 271 RGIHGRVAAAEQLAEAQIADARKARANYAAKIVALLGDTGVLLAPVVPEAPFRLDAPIEV 330
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ +R A LL +AG+ G QV+ P G D P +SL+ GSD L+ L L
Sbjct: 331 FDTYRHDAMRLLCVAGLVGLPQVTFPAGSIDGAPFGLSLIGPRGSDLSLIALANAL 386
>gi|265985701|ref|ZP_06098436.1| amidase [Brucella sp. 83/13]
gi|306837381|ref|ZP_07470260.1| amidase [Brucella sp. NF 2653]
gi|264664293|gb|EEZ34554.1| amidase [Brucella sp. 83/13]
gi|306407573|gb|EFM63773.1| amidase [Brucella sp. NF 2653]
Length = 401
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 220/413 (53%), Gaps = 43/413 (10%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G AIKDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAIKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK----VPS 253
+ +Q+++ +P ++E ++LG D
Sbjct: 194 EFKLTQLLY---------MP-------------------VLEQLLLGQAETDAYCVMFAK 225
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
++ + + + ++ S+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 226 VRPYFTNLKAASQPTL-SIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYG 284
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFS 373
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A
Sbjct: 285 AEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALR 344
Query: 374 LLSIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
LL ++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 345 LLCLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRALIALAQTI 396
>gi|404319786|ref|ZP_10967719.1| amidase [Ochrobactrum anthropi CTS-325]
Length = 395
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 204/398 (51%), Gaps = 37/398 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G A+KDI+DV G TG GNP A +AP V +L+ GA +GK DE+
Sbjct: 25 PLKGERLAVKDIYDVAGMATGCGNPQIEAESPRAERSAPVVKKLLAAGAEFVGKAQTDEL 84
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+ G+N H+ P NP APDRV GGSSSGSA AV KL D +LG+DTGGS+R PAS+CG
Sbjct: 85 AFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRAPASFCG 144
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G R +H + ++P+A S DT+GWFA D + +RVG +LL +D R +Q+++
Sbjct: 145 LVGLRTTHGRIPLEDIMPLAPSLDTIGWFARDIDLYDRVGSILL--GNDAREFRLTQLLY 202
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL-----QHFLSEG 261
++E ++LG D ++ HF G
Sbjct: 203 MP----------------------------VLEQLLLGQQETDAYRTMFAQVRPHF--SG 232
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
K S+ L R +Q E HG W+++ LGPG+++R +A +
Sbjct: 233 LKAASQPTLSIDELYLVFRHIQGAEAWATHGSWISSGDRKLGPGVADRFAFGAEIAADLV 292
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ + + L ++G+ +L +PTVPG P + L+ +R +A LL ++ +S
Sbjct: 293 ASQRMRRAQFTQELEQIVGNDAVLALPTVPGAAPLAKEPFETLQAYREQALRLLCLSVLS 352
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
G Q+++PLG P IS + GSD L+ L + +
Sbjct: 353 GLPQITLPLGQVQGAPFGISFIGPRGSDRALIGLAKNI 390
>gi|261318972|ref|ZP_05958169.1| amidase [Brucella pinnipedialis B2/94]
gi|340791861|ref|YP_004757325.1| amidase [Brucella pinnipedialis B2/94]
gi|261298195|gb|EEY01692.1| amidase [Brucella pinnipedialis B2/94]
gi|340560320|gb|AEK55557.1| amidase [Brucella pinnipedialis B2/94]
Length = 401
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 218/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 AILKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|392538302|ref|ZP_10285439.1| amidase [Pseudoalteromonas marina mano4]
Length = 402
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 200/405 (49%), Gaps = 40/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LS + A+KD+F V G GNP W + A TA +V ++ G G T DE+A
Sbjct: 29 LSTMRLAVKDVFAVKGERNSAGNPSWFKAAKPAQQTASSVNKLMDTGCIFKGFTHTDELA 88
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV L D LGTDTGGS+R+PASYCG+
Sbjct: 89 YSLEGNNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGL 148
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG RPSH+ + G+IP+A FDT+GW ++L +VG VLL P+Q I +
Sbjct: 149 FGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLEKVGNVLL----------PNQAINS 198
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ L + + V+ L +++L +K P +H +E+
Sbjct: 199 VNTLVICEPLFELVSPALQAPLKQL--------------LKKTKPFFKH-------HKEF 237
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTTVK--PDLGPGISERVWEAVRTSAQKID 322
+P+ L+ L+ + R+LQ H DW+ + P P I+ R A+ +AQ+
Sbjct: 238 ELPNISLLSELADSFRILQGRAIAKAHKDWLQLPEPPPQFTPAIAARFKMALALTAQEEK 297
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+V+ + + ++ L L +PT P PKL D SAL R + +L +IAG+S
Sbjct: 298 EALNVQIQWQTLIAKNLNSTSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGLSR 354
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
QV +P+ L + P SL+ H +D LL L K+E
Sbjct: 355 SAQVHLPIANLANGHPYGFSLMMSHNNDKSLLACATQLAAYFKQE 399
>gi|225685963|ref|YP_002733935.1| amidase [Brucella melitensis ATCC 23457]
gi|256262912|ref|ZP_05465444.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|265993439|ref|ZP_06105996.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|384212637|ref|YP_005601720.1| amidase [Brucella melitensis M5-90]
gi|384409737|ref|YP_005598357.1| amidase [Brucella melitensis M28]
gi|384446267|ref|YP_005660485.1| amidase [Brucella melitensis NI]
gi|225642068|gb|ACO01981.1| amidase [Brucella melitensis ATCC 23457]
gi|262764309|gb|EEZ10341.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|263092750|gb|EEZ16959.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|326410284|gb|ADZ67348.1| amidase [Brucella melitensis M28]
gi|326553577|gb|ADZ88216.1| amidase [Brucella melitensis M5-90]
gi|349744264|gb|AEQ09806.1| amidase [Brucella melitensis NI]
Length = 401
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG ++D P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMYDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|407974607|ref|ZP_11155515.1| amidase [Nitratireductor indicus C115]
gi|407429690|gb|EKF42366.1| amidase [Nitratireductor indicus C115]
Length = 392
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 217/420 (51%), Gaps = 31/420 (7%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
M +RD+ AF++ + P +++ PL+G T +KDIFDV G+ T G P + A
Sbjct: 1 MTTRDA-LNAFLD-YEDVPVANSADGPLAGTTLGVKDIFDVAGYPTVGGQPSRLKEFPPA 58
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
TA AV +L GA IGKT DE+ YS+ G N HY P N AP RV GGSSSGSA A
Sbjct: 59 GETASAVQILLDAGARFIGKTQTDELTYSMMGMNAHYPAPVNRAAPQRVTGGSSSGSAAA 118
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK 180
V L D ++G+DT GS+R PAS+CG+ G R +H + G +P+A SFDT GWFA D
Sbjct: 119 VAGGLADIAVGSDTNGSIRAPASFCGLIGLRTTHGRIPLQGAMPLAPSFDTFGWFARDAA 178
Query: 181 ILNRVGRVLL-QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE 239
+VG +LL + + L RP ++ E CL + S V G++ V F
Sbjct: 179 TYAKVGELLLGEDPHEAPLTRPVRIAELEACLFGEAERS--VYAGMLGKVLHQF------ 230
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVK 299
++ P+ FL+ + L++A R LQ YE HGD++T +
Sbjct: 231 ---------ERQPA---FLALPLAPER--------LTAAFRELQAYEAWQTHGDFITRAE 270
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
P LGPG+ ER A R D+ + + +AL D +L++PT P P
Sbjct: 271 PKLGPGVKERFEAASRIDRSAFDMARGTRANFIQDFAALFDDDMVLIMPTQPTAAPMKSA 330
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ L+ +R+ L ++AG+ G+ Q++IPLG P ISLLA GSD L+ L +
Sbjct: 331 TAAELDSYRSLTAPLSALAGMLGWPQITIPLGRVHEAPFGISLLAPAGSDRQLIRLAAAI 390
>gi|398829190|ref|ZP_10587390.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
gi|398218048|gb|EJN04565.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
Length = 396
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 204/398 (51%), Gaps = 37/398 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G T A+KDIFDV G TG GN A TA AV +L GA IGKT DE+
Sbjct: 24 PLKGETLAVKDIFDVAGLPTGCGNRQKQGESPVANETASAVQHLLDAGAKFIGKTQTDEL 83
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+ G+N HY P NP +PDRV GGSSSGSA AV + + GTDTGGS+R PAS+CG
Sbjct: 84 AFSLIGQNAHYPYPVNPASPDRVTGGSSSGSASAVAGGIASIATGTDTGGSIRAPASFCG 143
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL-ADDVNLVRPSQVI 205
+ G R SH + G +P+A S DT GWFA D + +VG +LL A + L RP +
Sbjct: 144 LIGLRTSHGRIPLDGTMPLAPSLDTFGWFARDIDLYEKVGNILLGADASEFKLKRP---L 200
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN--- 262
F IP ++E++++G+ +D + L N
Sbjct: 201 F---------IP-------------------LLEHLLVGE-AEDAAYRQMYKLVSNNLGH 231
Query: 263 -KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+ S S+ L R +Q +E HG W++ LGPG+ ER A +
Sbjct: 232 ARSARQSTASMDDLYLCFRQIQGFEAWATHGAWLSEKDRGLGPGVKERFEYAAAIDLETY 291
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
V +T + ++ LL D G+LV+PTVPG P ++ +R +A LL ++G+S
Sbjct: 292 QVQTKRRTLFTSEIADLLQDDGVLVMPTVPGAAPLAATPFDEIQTYREQALHLLMLSGLS 351
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
G Q+++PLG P ISLL GSD L+ L T+
Sbjct: 352 GVPQITLPLGQVHGAPFGISLLGPKGSDMALIRLGRTI 389
>gi|390571058|ref|ZP_10251314.1| amidase [Burkholderia terrae BS001]
gi|389937214|gb|EIM99086.1| amidase [Burkholderia terrae BS001]
Length = 383
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 208/416 (50%), Gaps = 38/416 (9%)
Query: 12 MEKFVLQPS---SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
M F+ P S+ + L GL FA+KD+ DV G TG GNPDW THS A AP V
Sbjct: 1 MSAFIPGPRLRVSATARGALDGLRFAVKDLIDVAGTTTGGGNPDWLATHSPAARHAPCVA 60
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
+L GA+ GKTI DE+AYS+ G N HYGTP NP P +PGGSSSGSA AV + VDF
Sbjct: 61 RLLDAGASVDGKTITDELAYSLEGVNAHYGTPLNPRWPFALPGGSSSGSASAVASGEVDF 120
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
+LGTDTGGSVRVPA++CG++G RP+H AVS GV+P A FDTVGWFA +L RV V
Sbjct: 121 ALGTDTGGSVRVPAAFCGLWGIRPTHDAVSLEGVLPFAPCFDTVGWFAPTGAMLARVADV 180
Query: 189 LLQLADDVNLV-RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
LL DDV V PS ++ ++ + G + + +LF VI D
Sbjct: 181 LL---DDVPAVDAPSALVRCKEAFDARATNE----PGDAQRLRELFATQHEIEVIADDRA 233
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
+ H + LQ + G W+ KP G I+
Sbjct: 234 R-----WLHVYQQ---------------------LQDDAIGASLGAWIDATKPHFGADIA 267
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
R A +++ C ++ + ++GD ++V+PT P P + F
Sbjct: 268 ARFARLKMHDAAEVERCHVMRAAFAQRIDGIVGDT-LIVLPTTPRSLLSKHETPERTDAF 326
Query: 368 RARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
A ++ +IA G QV++P+ P+A+S++ GSD L+ L TL
Sbjct: 327 YRDALTMNAIAAFGGLPQVTVPVANESERPLALSIIGPRGSDRALIARARQLFPTL 382
>gi|62317057|ref|YP_222910.1| amidase [Brucella abortus bv. 1 str. 9-941]
gi|83269050|ref|YP_418341.1| amidase [Brucella melitensis biovar Abortus 2308]
gi|189022322|ref|YP_001932063.1| amidase [Brucella abortus S19]
gi|237816618|ref|ZP_04595610.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus
str. 2308 A]
gi|260544293|ref|ZP_05820114.1| amidase [Brucella abortus NCTC 8038]
gi|260759552|ref|ZP_05871900.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260762797|ref|ZP_05875129.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|376270643|ref|YP_005113688.1| amidase [Brucella abortus A13334]
gi|423169073|ref|ZP_17155775.1| hypothetical protein M17_02762 [Brucella abortus bv. 1 str. NI435a]
gi|423171494|ref|ZP_17158168.1| hypothetical protein M19_02026 [Brucella abortus bv. 1 str. NI474]
gi|423174775|ref|ZP_17161445.1| hypothetical protein M1A_02172 [Brucella abortus bv. 1 str. NI486]
gi|423176653|ref|ZP_17163319.1| hypothetical protein M1E_00915 [Brucella abortus bv. 1 str. NI488]
gi|423180925|ref|ZP_17167565.1| hypothetical protein M1G_02024 [Brucella abortus bv. 1 str. NI010]
gi|423184056|ref|ZP_17170692.1| hypothetical protein M1I_02024 [Brucella abortus bv. 1 str. NI016]
gi|423187205|ref|ZP_17173818.1| hypothetical protein M1K_02022 [Brucella abortus bv. 1 str. NI021]
gi|423189626|ref|ZP_17176235.1| hypothetical protein M1M_01307 [Brucella abortus bv. 1 str. NI259]
gi|62197250|gb|AAX75549.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939324|emb|CAJ12263.1| Amidase [Brucella melitensis biovar Abortus 2308]
gi|189020896|gb|ACD73617.1| Amidase [Brucella abortus S19]
gi|237787431|gb|EEP61647.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus
str. 2308 A]
gi|260097564|gb|EEW81438.1| amidase [Brucella abortus NCTC 8038]
gi|260669870|gb|EEX56810.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260673218|gb|EEX60039.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|363401815|gb|AEW18784.1| amidase [Brucella abortus A13334]
gi|374536916|gb|EHR08434.1| hypothetical protein M17_02762 [Brucella abortus bv. 1 str. NI435a]
gi|374537114|gb|EHR08628.1| hypothetical protein M19_02026 [Brucella abortus bv. 1 str. NI474]
gi|374538279|gb|EHR09788.1| hypothetical protein M1A_02172 [Brucella abortus bv. 1 str. NI486]
gi|374547455|gb|EHR18910.1| hypothetical protein M1G_02024 [Brucella abortus bv. 1 str. NI010]
gi|374547860|gb|EHR19313.1| hypothetical protein M1I_02024 [Brucella abortus bv. 1 str. NI016]
gi|374553230|gb|EHR24650.1| hypothetical protein M1E_00915 [Brucella abortus bv. 1 str. NI488]
gi|374556932|gb|EHR28332.1| hypothetical protein M1K_02022 [Brucella abortus bv. 1 str. NI021]
gi|374557180|gb|EHR28579.1| hypothetical protein M1M_01307 [Brucella abortus bv. 1 str. NI259]
Length = 401
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 217/411 (52%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LGTDTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGTDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R Q E NHG W+++ LGP I++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQTQGAEAWENHGAWISSGNRQLGPRIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|261323626|ref|ZP_05962823.1| amidase [Brucella neotomae 5K33]
gi|261299606|gb|EEY03103.1| amidase [Brucella neotomae 5K33]
Length = 401
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 218/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG V L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAV--PLGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|420253617|ref|ZP_14756664.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398051850|gb|EJL44161.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 383
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 202/396 (51%), Gaps = 33/396 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL FA+KD+ DV G TG GNPDW THS A AP V +L GA+ GKTI DE+A
Sbjct: 20 LDGLRFAVKDLIDVAGTTTGGGNPDWLATHSPAARHAPCVAKLLDAGASVDGKTITDELA 79
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP P +PGGSSSGSA AV + VDF+LGTDTGGSVRVPA++CG+
Sbjct: 80 YSLEGVNAHYGTPLNPRWPFALPGGSSSGSASAVASGEVDFALGTDTGGSVRVPAAFCGL 139
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H+AVS GV+P A FDTVGWF ++L RV VLL V+ PS ++
Sbjct: 140 WGIRPTHNAVSLEGVLPFAPCFDTVGWFTATGEMLARVADVLLDGVPAVDA--PSALVRC 197
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
++ + G + + +LF H VI D + H +
Sbjct: 198 KEAFDARATNE----PGDAQRLGELFATHDEIEVIADDRAR-----WLHVYQQ------- 241
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
LQ + G W+ KP G I+ R A +++ C+ +
Sbjct: 242 --------------LQDDAIGASLGAWIDATKPHFGADIAARFARLKTHDAAEVERCRVM 287
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ + ++GD ++V+PT P P + F A ++ +IA G QV+
Sbjct: 288 RDAFAQRIDGIVGD-ALIVLPTAPRSLLSKHETPERTDAFYRDALTMNAIAAFGGLPQVT 346
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+P+ P+A+S++ GSD L+ L TL
Sbjct: 347 VPVANESERPLALSIIGPRGSDRALIARARQLFPTL 382
>gi|359449031|ref|ZP_09238535.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20480]
gi|358045168|dbj|GAA74784.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20480]
Length = 402
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 196/405 (48%), Gaps = 40/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LS A+KD+F V GNP W +TH A TA +V ++ G G T DE+A
Sbjct: 29 LSTKRLAVKDVFAVKKQKNSAGNPCWFKTHPLAQRTASSVNKLMDAGCIFKGFTHTDELA 88
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV L D LGTDTGGS+R+PASYCG+
Sbjct: 89 YSLEGNNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGL 148
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG RPSH+ + G+IP+A FDT+GW ++L +VG VLL +N V + ++
Sbjct: 149 FGIRPSHNLIEKDGLIPLAPPFDTIGWLTQSAELLEKVGNVLLS-NRAINSV--NTLVIC 205
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
E +L S + L+K + F H + +
Sbjct: 206 EPLFELVSPALQAPLKQLLKKTKPFFKHH----------------------------KNF 237
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTTVK--PDLGPGISERVWEAVRTSAQKID 322
+P+ L+ L+ + R+LQ H DW+ + P P I+ R A+ +AQ+
Sbjct: 238 ELPNISLLSELADSFRILQGRAIAKVHKDWLQLPEHPPQFAPAIAARFKMALALTAQEEK 297
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+V+T+ + ++ L L +PT P PKL D SAL R + +L +IAG+S
Sbjct: 298 EALNVQTQWQTLIAKNLNSTSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGLSR 354
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
QV +PL L + P SL+ H +D LL L K+E
Sbjct: 355 SAQVHLPLANLANGHPYGFSLMMSHNNDKSLLACATQLAAYFKQE 399
>gi|332533367|ref|ZP_08409233.1| amidase [Pseudoalteromonas haloplanktis ANT/505]
gi|332037249|gb|EGI73705.1| amidase [Pseudoalteromonas haloplanktis ANT/505]
Length = 400
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 206/405 (50%), Gaps = 40/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ A+KD+F V G GNP W +T A +TA +V +++ G IG T DE+A
Sbjct: 27 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELA 86
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV A L D LGTDTGGS+R+PASYCG+
Sbjct: 87 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 146
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RPSH+ + G+IP+A FDT+GW ++L+ VG VLL P+Q I
Sbjct: 147 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGNVLL----------PNQAINN 196
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L + + V L +++L ++ P+ +H +E+
Sbjct: 197 VDTLVICEPLFELVDSALQAPLKQL--------------LEKTKPNFKH-------HKEF 235
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTTVK--PDLGPGISERVWEAVRTSAQKID 322
+P+ L L+ + R+LQ H DW+ P P I+ R A+ + Q+
Sbjct: 236 ELPNSSLLNELADSFRVLQGRAIAKTHKDWLQLQGQLPQFAPAIAARFNMALALTDQEEQ 295
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
V+T+ + ++ L + L +PT P PKL D SAL R + +L +IAG+SG
Sbjct: 296 EALKVQTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGLSG 352
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
QV +PL L ++ P SL+ HG+D LL V+ L K++
Sbjct: 353 SAQVHLPLADLANDHPYGFSLMMSHGNDKSLLACVKHLAAHFKQD 397
>gi|225628576|ref|ZP_03786610.1| amidase [Brucella ceti str. Cudo]
gi|261219970|ref|ZP_05934251.1| amidase [Brucella ceti B1/94]
gi|261756331|ref|ZP_06000040.1| amidase [Brucella sp. F5/99]
gi|225616422|gb|EEH13470.1| amidase [Brucella ceti str. Cudo]
gi|260918554|gb|EEX85207.1| amidase [Brucella ceti B1/94]
gi|261736315|gb|EEY24311.1| amidase [Brucella sp. F5/99]
Length = 401
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 218/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-SFGISFIGPRGSDRTLIALAQTI 396
>gi|23015866|ref|ZP_00055631.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
related amidases [Magnetospirillum magnetotacticum MS-1]
Length = 391
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 202/387 (52%), Gaps = 27/387 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GLTFA KD+FDV G+VTG GNPDW R A TA AV A+L GA +GKT DE+
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPAKQTAWAVSALLESGARLVGKTHTDEL 82
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
I G+N HYGTP NP AP VPGGSSSGSA AV L +LGTDT GS RVPAS+CG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLASMALGTDTAGSTRVPASFCG 142
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+ + GV+ + +FDTVG A D +IL +G LL+ + VRP+Q +
Sbjct: 143 VYGLRPTLGTIPMDGVLSQSNTFDTVGLLADDAEILGLMGEALLR--KKIKDVRPAQAVV 200
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
ED ++ S + + ++ +P ++ ++ + ++
Sbjct: 201 LEDAMEAS-------------------------DPAVAAAIEAALPRIKDAVAPITRGRK 235
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
S LA +Q E G+W+ P G +++ + S + + +
Sbjct: 236 VSPVPLADWVEHQNAIQGREAWERFGEWINNSNPRFGFEVADNFLRGSKVSQRTLSAARG 295
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+ + + L + +LV+PT P P + S + R R SL +IAG++G Q+
Sbjct: 296 FRLRAKRWVQEALEGNAVLVLPTTPVTAPPVHSPRSVMWEIRHRMVSLTTIAGMAGCPQI 355
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLL 413
S+PL D LPV +SL+ GSD LL
Sbjct: 356 SLPLCKVDGLPVGLSLIGPRGSDALLL 382
>gi|218202689|gb|ACK75962.1| amidase family protein [Proteus mirabilis]
Length = 408
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 225/416 (54%), Gaps = 31/416 (7%)
Query: 9 GAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
GAF+E F ++P S+ L+GLTFA+KD D+ + T +G+P W H AA A V
Sbjct: 8 GAFVETFTIEPYSNGS---LNGLTFAVKDNIDIAQYKTSYGSPSWQHKHKAAIYNALCVD 64
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
+L GAT +GKT+ DE YS++GEN +GTP NP PDR+PGGSSSGSA AV LVDF
Sbjct: 65 QLLGAGATCLGKTVSDEFTYSLDGENFFFGTPINPKVPDRIPGGSSSGSASAVACGLVDF 124
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
++GTD+ GS+RVPAS CG++ RP+ +S AGV+P S TVG FA D +L V
Sbjct: 125 AIGTDSAGSIRVPASLCGVYAMRPTMHRISEAGVLPFVPSTSTVGAFANDIDVLGDVMHT 184
Query: 189 LLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
LL+ ++ V + + ED SD L+K I N+++
Sbjct: 185 LLK-SESVVSQKIETIYLLEDAFN----TSDAEVSALIKDS--------INNLLVNIDAD 231
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
+L L E E ++ L +A+R LQ +EF N G+W+ P+L P +
Sbjct: 232 VVSITLSDILGE-----EATLDMLNV--NALRPLQTFEFLNTVGNWIEHESPELSPFFAM 284
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRA--ALSALLGDHGILVIPTVPGPPP---KLQMDPSA 363
+ +E VR +K+ V S++ R +S+ L +++ PTVP P L+ +A
Sbjct: 285 K-YETVRKFERKL-VSDSLRLCERYFRRMSSFLKKGDLVLFPTVPTVAPLKHSLEDMETA 342
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
L+ F R S+ S +G+ ++SIP+ DN PV +S+ A D FL++ V+ L
Sbjct: 343 LD-FYDRTMSITSFSGIGRLPEISIPIANIDNAPVGLSVAAGFYQDEFLISSVKQL 397
>gi|359433203|ref|ZP_09223544.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20652]
gi|357920164|dbj|GAA59793.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20652]
Length = 406
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 204/405 (50%), Gaps = 40/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ A+KD+F + H GNP W +TH A TA +V ++ G G T DE+A
Sbjct: 33 LNNKRLAVKDVFAIKDHKNSAGNPHWFKTHPPAQKTASSVSKLMDAGCIFTGYTHTDELA 92
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV A L D LGTDTGGS+R+PASYCG+
Sbjct: 93 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 152
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RPSH+ + G+IP+A FDT+GW + ++L+ VG VLL P+Q I
Sbjct: 153 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQNAELLSDVGNVLL----------PNQAINN 202
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ L + + V L +++L ++ P+ +H +E+
Sbjct: 203 VNTLVICEPLFELVDSALQAPLKQL--------------LEKTKPNFKH-------HKEF 241
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTT--VKPDLGPGISERVWEAVRTSAQKID 322
+P+ L L+ + R+LQ H DW+ P P I+ R A+ + Q+
Sbjct: 242 ELPNSSLLNELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQ 301
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
V+T+ + ++ L + L +PT P PKL D SAL R + +L +IAG SG
Sbjct: 302 EALKVQTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGFSG 358
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
QV +PL L ++ P SL+ HG+D LL V+ L K++
Sbjct: 359 SAQVHLPLADLANDHPYGFSLMMSHGNDKSLLACVKHLAAHFKQD 403
>gi|161620187|ref|YP_001594073.1| amidase [Brucella canis ATCC 23365]
gi|260568563|ref|ZP_05839032.1| amidase [Brucella suis bv. 4 str. 40]
gi|376277187|ref|YP_005153248.1| amidase [Brucella canis HSK A52141]
gi|161336998|gb|ABX63302.1| amidase [Brucella canis ATCC 23365]
gi|260155228|gb|EEW90309.1| amidase [Brucella suis bv. 4 str. 40]
gi|363405561|gb|AEW15855.1| amidase [Brucella canis HSK A52141]
Length = 401
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 218/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LG GI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGLGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|406596410|ref|YP_006747540.1| amidase [Alteromonas macleodii ATCC 27126]
gi|406373731|gb|AFS36986.1| amidase [Alteromonas macleodii ATCC 27126]
Length = 421
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 206/399 (51%), Gaps = 39/399 (9%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L + S +LPLSGL A+KD+F ++G T GNPDW TH+ +T V +L GAT
Sbjct: 43 LNQAKSQSKLPLSGLGLAVKDLFHIEGLPTAAGNPDWLATHAIPKNTNRCVAKMLQAGAT 102
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
GKTI DE+AYS++G+NKHY T NP AP +PGGSSSGSAVAV A L D LGTDTGG
Sbjct: 103 FKGKTITDELAYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGG 162
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+RVP+SY G++G R +H V+ ++ +A SFDTVGW D L +V V +
Sbjct: 163 SIRVPSSYQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLNTLTKVANVCI------ 216
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQ 255
D TQ + + H+ E K + +
Sbjct: 217 ----------------------DSATQSEISGSPRFGIAAHLFEQAAHKSLCKTWLAA-- 252
Query: 256 HFLSEGN-----KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
L++ N E + + +L ++ R LQ E HG+W+ +PD+ I R+
Sbjct: 253 --LADNNDCIVLSETQLDLKTLQT-AATFRTLQGNEIWQQHGEWIEYTQPDIAKDIMLRL 309
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
+ Q+++ ++ ++ + L+ L + +L+IPT PG P+ D + L R
Sbjct: 310 NWCKTITTQEVEQAKAQQSVVINHLNTLFEEIDVLIIPTTPGVAPRCDADETTLANDRNA 369
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
+L +IAG++G Q+ +PL N P +SL+ K G+D
Sbjct: 370 LLALTAIAGLAGLPQLHLPLFTLHNAPCGLSLVGKKGND 408
>gi|261215607|ref|ZP_05929888.1| amidase [Brucella abortus bv. 3 str. Tulya]
gi|260917214|gb|EEX84075.1| amidase [Brucella abortus bv. 3 str. Tulya]
Length = 401
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 218/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A++DI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVRDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +V VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVCAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|407683360|ref|YP_006798534.1| amidase [Alteromonas macleodii str. 'English Channel 673']
gi|407244971|gb|AFT74157.1| amidase [Alteromonas macleodii str. 'English Channel 673']
Length = 421
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 205/399 (51%), Gaps = 39/399 (9%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L + S +LPLSGL A+KD+F ++G T GNPDW THS +T V +L GA
Sbjct: 43 LNQAKSQSKLPLSGLGLAVKDLFHIEGLPTAAGNPDWLATHSIPKNTNRCVAKMLQAGAA 102
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
GKTI DE+AYS++G+NKHY T NP AP +PGGSSSGSAVAV A L D LGTDTGG
Sbjct: 103 FKGKTITDELAYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGG 162
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+RVP+SY G++G R +H V+ ++ +A SFDTVGW D L +V V +
Sbjct: 163 SIRVPSSYQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLNTLTKVANVCI------ 216
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQ 255
D TQ + + H+ E K + +
Sbjct: 217 ----------------------DSATQSEISGSPRFGIAAHLFEQAAHKSLCKTWLAA-- 252
Query: 256 HFLSEGN-----KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
L++ N E + + +L ++ R LQ E HG+W+ +PD+ I R+
Sbjct: 253 --LADNNDCIVLSETQLDLKTLQT-AATFRTLQGNEIWQQHGEWIEYTQPDIAKDIMLRL 309
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
+ Q+++ ++ ++ + L+ L + +L+IPT PG P+ D + L R
Sbjct: 310 NWCKTITTQEVEQAKAQQSVVINHLNTLFEEIDVLIIPTTPGVAPRCDADETTLANDRNA 369
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
+L +IAG++G Q+ +PL N P +SL+ K G+D
Sbjct: 370 LLALTAIAGLAGLPQLHLPLFTLHNAPCGLSLVGKKGND 408
>gi|306845477|ref|ZP_07478050.1| amidase [Brucella inopinata BO1]
gi|306274128|gb|EFM55947.1| amidase [Brucella inopinata BO1]
Length = 401
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 217/411 (52%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A L+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGALAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDELAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ANLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+ + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTPDMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPFTSEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|17989479|ref|NP_542112.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260564256|ref|ZP_05834741.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|265989461|ref|ZP_06102018.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
gi|17985361|gb|AAL54376.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260151899|gb|EEW86992.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|263000130|gb|EEZ12820.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
Length = 401
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 218/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFSQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG ++D P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMYDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|392533768|ref|ZP_10280905.1| amidase [Pseudoalteromonas arctica A 37-1-2]
Length = 400
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 206/405 (50%), Gaps = 40/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ A+KD+F V G GNP+W +T A +TA +V +++ G IG T DE+A
Sbjct: 27 LANNRLAVKDVFAVKGERNSAGNPNWFKTAKPAKNTASSVNKLMTAGCNFIGFTHTDELA 86
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV A L D LGTDTGGS+R+PASYCG+
Sbjct: 87 YSLEGSNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 146
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RPSH+ + G+IP+A FDT+GW ++L+ VG +LL P Q I
Sbjct: 147 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSSVGDILL----------PQQAINK 196
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ L + + V L +++L ++ P+ +H +E+
Sbjct: 197 VNTLVICEALFELVDPALQAPLKQL--------------LEKTKPNFKH-------HKEF 235
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTT--VKPDLGPGISERVWEAVRTSAQKID 322
+P+ L L+ + R+LQ H DW+ P P I+ R A+ + Q+
Sbjct: 236 ELPNSNLLNELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTVQEEQ 295
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
V+T+ + ++ L + L +PT P PKL D SAL R + +L +IAG+SG
Sbjct: 296 EALKVQTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGLSG 352
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
QV +PL L ++ P SL+ HG+D LL V+ L K++
Sbjct: 353 SAQVHLPLADLANDHPYGFSLMMSHGNDKSLLACVKHLAAHFKQD 397
>gi|261749862|ref|ZP_05993571.1| amidase [Brucella suis bv. 5 str. 513]
gi|261739615|gb|EEY27541.1| amidase [Brucella suis bv. 5 str. 513]
Length = 404
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 219/414 (52%), Gaps = 42/414 (10%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFC---QVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 399
>gi|407687341|ref|YP_006802514.1| amidase [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407290721|gb|AFT95033.1| amidase [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 409
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 203/385 (52%), Gaps = 27/385 (7%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q PL GL A+KD+F + G T GNPDW THS +T+ V +L GA GKTI D
Sbjct: 39 QKPLCGLGLAVKDLFHIQGLPTSAGNPDWLATHSIPENTSSCVAKMLQAGAVFKGKTITD 98
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+AYS++G+NKHY T NP AP +PGGSSSGSAVAV A L D LGTDTGGS+RVP+SY
Sbjct: 99 ELAYSLHGQNKHYETLVNPAAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPSSY 158
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G++G R +H V+ ++ +A SFDTVGW D L +V V + A + + +
Sbjct: 159 QGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLDTLTKVSNVCIDSATQIEISGTPRF 218
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I + Q KS+ K + + EN D + LS E
Sbjct: 219 ----------GIAAHLFEQAAHKSLCKTWLAALAEN---NDCIT---------LS----E 252
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+ + +L ++ R LQ E HG+W+ +PD+ I R+ + Q +
Sbjct: 253 TQLDLDTLQT-AATFRTLQGNEIWQQHGEWIENTQPDIAKDIVLRLNWCKAITTQNVQQA 311
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
++ ++ + L+AL D +L+IPT PG P+ D + L R +L +IAG++G
Sbjct: 312 KAQQSVVINHLNALFEDIDVLIIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLP 371
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSD 409
Q+ +PL N P +SL+ K G+D
Sbjct: 372 QLHLPLFTLHNAPCGLSLVGKKGND 396
>gi|407699706|ref|YP_006824493.1| amidase [Alteromonas macleodii str. 'Black Sea 11']
gi|407248853|gb|AFT78038.1| amidase [Alteromonas macleodii str. 'Black Sea 11']
Length = 409
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 200/391 (51%), Gaps = 39/391 (9%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q PL GL A+KD+F + G T GNPDW THS +T+ V +L GA GKTI D
Sbjct: 39 QKPLCGLGLAVKDLFHIQGLPTSAGNPDWLATHSIPENTSSCVAKMLQAGAVFKGKTITD 98
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+AYS++G+NKHY T NP AP +PGGSSSGSAVAV A L D LGTDTGGS+RVP+SY
Sbjct: 99 ELAYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPSSY 158
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G++G R +H V+ ++ +A SFDTVGW D L +V V +
Sbjct: 159 QGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLDTLTKVSNVCI-------------- 204
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQHFLSEGN- 262
D TQ + + H+ E K + +L +E N
Sbjct: 205 --------------DSATQSEISGTPRFGIAAHLFEQAAHKSLCKTWLAAL----AENND 246
Query: 263 ----KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
E + + +L ++ R LQ E HG+W+ +PD+ I R+ +
Sbjct: 247 CITLSETQLDLDTLQT-AATFRTLQGNEIWQQHGEWIENTQPDIAKDIMLRLDWCKTITT 305
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
Q++ ++ ++ + L+AL D +LVIPT PG P+ D + L R +L +I+
Sbjct: 306 QEVQQAKAQQSVVINHLNALFEDIDVLVIPTTPGVAPRCDADETTLANDRNTLLALTAIS 365
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
G++G Q+ +PL N P +SL+ K G+D
Sbjct: 366 GLAGLPQLHLPLFTLHNAPCGLSLVGKKGND 396
>gi|163844297|ref|YP_001621952.1| amidase [Brucella suis ATCC 23445]
gi|163675020|gb|ABY39130.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 401
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 218/411 (53%), Gaps = 39/411 (9%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
+P + A PL+G A+KDI+D+ G VTG GNP A +AP V +L+ GA
Sbjct: 16 KPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEF 75
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL + +LG+DTGGS
Sbjct: 76 IGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLANIALGSDTGGS 135
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R PAS+CG+ G R +H + G++ +A S DT+GWFA D + +VG VL L DD
Sbjct: 136 IRTPASFCGLIGLRSAHGRIPLEGIMSLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQ 193
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ +Q+++ + +E+L G + + K + HF
Sbjct: 194 EFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHF 230
Query: 258 LSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ Q P+L+ L A R +Q E NHG W+++ LGPGI++R
Sbjct: 231 ATLKAASQ----PTLSIDELYLAFRQIQGAEPWENHGAWISSGNRQLGPGIADRFAYGAE 286
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A + ++ + A++G+ +L +PTVPG P AL+ +R +A LL
Sbjct: 287 MTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLL 346
Query: 376 SIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 347 CLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 396
>gi|336117854|ref|YP_004572622.1| amidase [Microlunatus phosphovorus NM-1]
gi|334685634|dbj|BAK35219.1| putative amidase [Microlunatus phosphovorus NM-1]
Length = 534
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 202/424 (47%), Gaps = 50/424 (11%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
S A + PL+GLT A+KD+F + G+ G GNP W R +TAPAV +L GGA+ G
Sbjct: 139 SQGAWEGPLAGLTVAVKDLFAIRGYRIGAGNPTWLRERRREQATAPAVSDLLRGGASLRG 198
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
DE AYSI G N HYGTP N P +PGGSS+G A AV D L +DT GS+R
Sbjct: 199 IARTDEFAYSIAGANVHYGTPPNGALPGALPGGSSNGPAAAVALGQADVGLASDTAGSIR 258
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--------- 190
VPASY G++G R +H V G++P++Q+FDTVGW A D + L+RV +L
Sbjct: 259 VPASYQGLWGLRTTHGIVPRQGMLPLSQTFDTVGWLARDAETLDRVATWVLITDSSADDP 318
Query: 191 --QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVK---SVEKLFGGHIIENVILGD 245
L D L P ++ + L + + Q + + +++ G I+E +GD
Sbjct: 319 EADLTPDAQL--PRRIAVPAEALACTEADTRDAFQAWLDRAAATDQVDGVDIVE---VGD 373
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
L+A R +Q E N+G WV LGP
Sbjct: 374 --------------------------LSAYLEVFRTVQSAEAWRNNGAWVEAHPGALGPD 407
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
I+ R+ A R + ++ Q+ + +R + AL D ILV+PT PGP P D +E
Sbjct: 408 IAARLEMASRVTTEQERAAQNELSRMRQRIRALT-DEAILVLPTAPGPAPARTADGPTIE 466
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPL----GLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
RA + S+AG+ G +S PL L PV + + D LL V +
Sbjct: 467 TVRAATLRMTSLAGIGGLPALSAPLLTVPSLLGPAPVGVCFVGPAERDLDLLRWVRAIEA 526
Query: 422 TLKE 425
++
Sbjct: 527 ATQD 530
>gi|414072378|ref|ZP_11408322.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. Bsw20308]
gi|410805194|gb|EKS11216.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. Bsw20308]
Length = 401
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 205/404 (50%), Gaps = 40/404 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ A+KD+F V G GNP W +T A +TA +V +++ G IG T DE+A
Sbjct: 28 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELA 87
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV A L D LGTDTGGS+R+PASYCG+
Sbjct: 88 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 147
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RPSH+ + G+IP+A FDT+GW ++L+ VG VLL P+Q I
Sbjct: 148 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGSVLL----------PNQAINN 197
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L + + V L +++L ++ P+ +H +E+
Sbjct: 198 VDTLVICEPLFELVDPALQAPLKQL--------------LEKTKPNFKH-------HKEF 236
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTT--VKPDLGPGISERVWEAVRTSAQKID 322
+P+ L L+ + R+LQ H DW+ P P I+ R A+ + Q+
Sbjct: 237 ELPNSNLLNELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQ 296
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
V+T+ + ++ L + L +PT P PKL D SAL R + +L +IAG+SG
Sbjct: 297 EALKVQTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGLSG 353
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
QV +PL L ++ P SL+ HG+D LL V+ L K+
Sbjct: 354 SAQVHLPLADLANDHPYGFSLMMSHGNDKSLLACVKHLAAHFKQ 397
>gi|359452027|ref|ZP_09241390.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20495]
gi|358050908|dbj|GAA77639.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20495]
Length = 401
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 207/404 (51%), Gaps = 40/404 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ A+KD+F V G GNP W +T A +TA +V +++ G IG T DE+A
Sbjct: 28 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTVGCNFIGFTHTDELA 87
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYG NP GGSS GSA AV A L D LGTDTGGS+R+PASYCG+
Sbjct: 88 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 147
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RPSH+ + G+IP+A FDT+GW ++L+ VG VLL P+Q I
Sbjct: 148 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGNVLL----------PNQAINN 197
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L + + L + V+ + V L ++ P+ +H +E+
Sbjct: 198 VDTL--------VICEPLFELVDPVL------QVPLKQLLEKIKPNFKH-------HKEF 236
Query: 268 SIPS---LAALSSAMRLLQRYEFKNNHGDWVTT--VKPDLGPGISERVWEAVRTSAQKID 322
+P+ L+ L+ + R+LQ H DW+ P P I+ R A+ + Q+
Sbjct: 237 ELPNSSLLSELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQ 296
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
V+T+ + ++ L + L +PT P PKL D SAL R + +L +IAG+SG
Sbjct: 297 EALKVQTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGADTSAL---RMQIITLSAIAGLSG 353
Query: 383 FCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
QV +PL L ++ P SL+ HG+D LL V+ L K+
Sbjct: 354 SAQVHLPLADLANDHPYGFSLMMSHGNDKSLLACVKHLAAHFKQ 397
>gi|423119157|ref|ZP_17106841.1| hypothetical protein HMPREF9690_01163 [Klebsiella oxytoca 10-5246]
gi|376399803|gb|EHT12417.1| hypothetical protein HMPREF9690_01163 [Klebsiella oxytoca 10-5246]
Length = 394
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 210/424 (49%), Gaps = 38/424 (8%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
D AFM + QP A PLSG+TFA+KD+FDV G+ TG GNP TAP
Sbjct: 4 DNHAFM-PYPPQPVPHALSGPLSGMTFAVKDLFDVAGYPTGGGNPHLLALSGIKRRTAPV 62
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V +L GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV +
Sbjct: 63 VQRLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNGVC 122
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
DF+LGTDTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ V
Sbjct: 123 DFALGTDTGGSVRTPASYCGLFGLRPTHGRISLDGCQPLCATMDTCGFFAQTPEVFRAVA 182
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLV---KSVEKLFGGHIIENVIL 243
LL D + V A S +P R Q L+ + +E++FG N
Sbjct: 183 DCLL----DAKPPAIAGVALACHDALFSCLPL-RSQQALLPVRQRLERVFGTFTPLNA-- 235
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
S+P + + A R +Q +E G+ + LG
Sbjct: 236 ------------------------SLPDIDEIYLAFRQIQGFEAWQAQGETIERYGLQLG 271
Query: 304 PGISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P + ER +W T AQ CQ + ALLGD ILV+PTVP P L
Sbjct: 272 PDVRERFLWGKAVTPAQYEAACQR-REHFTRWWDALLGD-AILVLPTVPDGAPLLTAQAE 329
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+E R + LL I+ ++ QV++P+ LP+ IS L GSD L+ L
Sbjct: 330 EIETTRRLSHDLLLISVMTRRPQVTLPVAQAGGLPLGISFLGPCGSDRLLVELAVAFAQG 389
Query: 423 LKEE 426
K+E
Sbjct: 390 DKDE 393
>gi|319940606|ref|ZP_08014949.1| amidase [Sutterella wadsworthensis 3_1_45B]
gi|319805972|gb|EFW02730.1| amidase [Sutterella wadsworthensis 3_1_45B]
Length = 410
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 210/395 (53%), Gaps = 27/395 (6%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P A + PL+GLTFA+KDIFDV G+ T GNP + TA V +L+ GA
Sbjct: 33 PVPHAKEGPLTGLTFAVKDIFDVAGYPTSAGNPTFLALQGIKQKTASCVEKLLAAGAEFQ 92
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKTI DE+A+S+ G N H+G P N APDR GGSSSGSA AV LVDF+LG+DTGGS+
Sbjct: 93 GKTITDELAFSMQGANFHFGAPINGGAPDRYTGGSSSGSASAVSCGLVDFALGSDTGGSI 152
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R PAS CG+ G RP+ + P+++SFDTVG+FA ++ +V VL +
Sbjct: 153 RCPASQCGVIGLRPTVGRAALDHCQPLSKSFDTVGFFARRMEVFEKVAAVLYGQDANPED 212
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
+P ++IF +D + ++ D+V Q L K E G + G P+ F
Sbjct: 213 TKP-RLIFVDD---IWTLFGDKVQQALKKPYEAAVG-------LFGS------PASGQFS 255
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
+G L A R LQ E + G ++ T P LGPG+ ER A +
Sbjct: 256 PQG----------LERTFLAFRKLQTAEAWESDGSFIETYHPVLGPGVRERFILAKQWHV 305
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ + + ++ E RA L+ LL D G+ ++PT+P + + +E FR + L
Sbjct: 306 EDLSPEREIQAECRAHLTDLLKDDGLAILPTMPDAGIPVGASETFVERFRQKVSMCLCHG 365
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
G+SGF +S+PLG + P+ ISL+ G D +L+
Sbjct: 366 GLSGFPWISLPLGTINGAPIGISLVGPKGRDLWLI 400
>gi|304393377|ref|ZP_07375305.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130]
gi|303294384|gb|EFL88756.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130]
Length = 390
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 202/398 (50%), Gaps = 37/398 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL A+KDI+ V G+ G+G+P T T + +L G GK+ +E+
Sbjct: 24 PLAGLKLAVKDIYQVAGYPNGWGSPTRLVEAEVDTETQSVIQQMLDAGIEVAGKSQCEEL 83
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
+S+ G NKHYG P N APDRV GGSSSGSA V A +V+ + G+DTGGSVR PASYCG
Sbjct: 84 CFSLTGINKHYGAPVNAAAPDRVTGGSSSGSASLVSAGVVEVATGSDTGGSVRGPASYCG 143
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-QLADDVNLVRPSQVI 205
+ G RP++ +S +P+A S+D GWF D + +V V+L + ADD L R
Sbjct: 144 LIGLRPTYGRLSLDRTMPLADSYDCFGWFTKDGETFGKVADVVLGEDADDTKLRR----- 198
Query: 206 FAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
L ++P D G + G IIE +HF E + E
Sbjct: 199 -------LIAVPELDAQLLGDDDYLAYAKGAEIIE---------------KHFDDERHFE 236
Query: 265 QEYSIP-SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+P L A R+ Q YE + G W+ KP LGPG+ ER S K D
Sbjct: 237 ---PLPFDLEEAYWAFRVCQAYEAWQSLGPWIEKNKPQLGPGVKERF--EFGASITKADF 291
Query: 324 CQSV--KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ V + E R AL L+G G+LV+PT+P P L+ FR RA LL ++G S
Sbjct: 292 EKQVPKRLECRLALEELIGSDGLLVMPTMPSCAPLKNESEETLQAFRERALRLLCLSGNS 351
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
G Q+++PL P+ +S++ GSD L+ + E L
Sbjct: 352 GLPQITLPLATVHGAPLGVSIIGPRGSDRRLVRIAEAL 389
>gi|332528635|ref|ZP_08404617.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041951|gb|EGI78295.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 412
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 208/393 (52%), Gaps = 17/393 (4%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A+KD+ DV G +TG GNPDWA +H A + AP V A+ + GA +GKT+ DE+A
Sbjct: 33 LAGVRLAVKDLIDVGGTITGGGNPDWASSHGEAAADAPCVAALRAAGARVVGKTVTDELA 92
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S+ GEN +GTP +P P R+PGGSSSGSAVAV D +LGTDTGGSVRVPAS+CG+
Sbjct: 93 FSLEGENAFFGTPVHPLDPGRLPGGSSSGSAVAVAWGEADLALGTDTGGSVRVPASFCGL 152
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR-PSQVIF 206
RP+H ++ +GV+P A S DTVGWFA D +L G+VLL + VR P ++
Sbjct: 153 HALRPTHGRIALSGVLPFAPSLDTVGWFARDAALLRDAGQVLLGGSSAPTPVRAPLRLCI 212
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A+D L L+ S V + L+ + G E + G+ D + QE
Sbjct: 213 AQDTLALA---SPEVREALLDWARR--AGLREERLAFGEGEGDAAVA-----------QE 256
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+A LQ E + + G W+ +P GP I+ R A+ ++
Sbjct: 257 QGTAPWRDWLTAYATLQGLEIRTHLGPWIRARRPRFGPAIAPRFAGALALDESIGARWRA 316
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+T+ AL LG ++P P D + F A +L ++AG++G Q+
Sbjct: 317 WRTDAARALRERLGQDEAWLVPAAPTVALHRGADAATRNAFYDHALALGALAGLAGLPQL 376
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+PL LP+ +S ++ G D LL+L L
Sbjct: 377 VLPLRHTQGLPIGLSFISAPGHDERLLDLAVAL 409
>gi|333893596|ref|YP_004467471.1| amidase [Alteromonas sp. SN2]
gi|332993614|gb|AEF03669.1| amidase [Alteromonas sp. SN2]
Length = 425
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 212/413 (51%), Gaps = 35/413 (8%)
Query: 20 SSSAHQL---PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
SS+A +L L G A+KD+F ++G T GNPDW TH T++ V +L GAT
Sbjct: 32 SSTACELTGHALKGYGLAVKDLFHIEGLPTAAGNPDWLATHPVPTASNSTVEKLLDAGAT 91
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
GKTI DE+AYS++G+NKHY NP AP +PGGSSSGSAVAV A L D LGTDTGG
Sbjct: 92 FKGKTITDELAYSLHGQNKHYPQLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGG 151
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+RVPASY G++G R +H+A+ ++ +A SFDTVGW D L +V
Sbjct: 152 SIRVPASYQGLWGLRTTHNAIPCDNMVALAPSFDTVGWMTRDLDTLEKV----------- 200
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVK--SVEKLFGGHIIENVILGDYVKDKVPSL 254
S V A+ + S +D T ++ +V+ H++++ G + +L
Sbjct: 201 -----SHVCLADASQETLSNTADDATDTTIRIGTVQ-----HLLQSAKHGVLTTKWLETL 250
Query: 255 QHFLSEGN--------KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
N E E + +L ++ R+LQ E HG W+T PD+ I
Sbjct: 251 NEKADSDNAGFTITPITEHELDLSALNT-AATFRVLQGAEIWQQHGQWITDTSPDIAHDI 309
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
R+ S Q++D + + + +++L +L+IPT PG P+ D L
Sbjct: 310 MLRLNWCETISEQEVDDAKKQQVAFQEYINSLFETVDVLLIPTTPGIAPRCDADEETLAN 369
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
R +L SIAG++ Q+ +PL N P +SL+ K GSD L+ L + L
Sbjct: 370 DRNALLALTSIAGLAELPQIHMPLFTLQNAPCGLSLVGKKGSDLALIKLAKAL 422
>gi|402844241|ref|ZP_10892608.1| amidase family protein [Klebsiella sp. OBRC7]
gi|402275145|gb|EJU24306.1| amidase family protein [Klebsiella sp. OBRC7]
Length = 394
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 207/423 (48%), Gaps = 36/423 (8%)
Query: 7 DYGAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D AFM P AH L PLSGLTFA+KD+FDV G+ TG GNP TA
Sbjct: 4 DIRAFMP---YPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTA 60
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P V +L GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV +
Sbjct: 61 PVVQKLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNE 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+ DF+LG+DTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ +
Sbjct: 121 VCDFALGSDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFST 180
Query: 185 VGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
V L D + V A S +P R Q L+ ++L G
Sbjct: 181 VAACLF----DDERADITGVRLASHEGLFSRLPL-RSQQALLPVRQRL-------ARFFG 228
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGP 304
+ P +P + A R +Q YE G+ + LGP
Sbjct: 229 PLAQLDAP----------------LPDADDIYLAFRQIQGYEAWQAQGETIERYDLQLGP 272
Query: 305 GISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
+ ER W T AQ CQ ++ A ALLGD +LV+PTVP P L
Sbjct: 273 DVRERFFWGKAVTRAQFDAACQ-LRERFTAWWDALLGD-AVLVMPTVPDGAPLLTAQAEE 330
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+E R + LL I+ ++ QV++P+ LP+ IS L GSD L+ L
Sbjct: 331 IEAVRRLSHDLLLISVMTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVELAAAFMQGD 390
Query: 424 KEE 426
+ E
Sbjct: 391 RNE 393
>gi|423127971|ref|ZP_17115650.1| hypothetical protein HMPREF9694_04662 [Klebsiella oxytoca 10-5250]
gi|376395010|gb|EHT07660.1| hypothetical protein HMPREF9694_04662 [Klebsiella oxytoca 10-5250]
Length = 394
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 213/428 (49%), Gaps = 46/428 (10%)
Query: 7 DYGAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D AFM P AH L PLSGLTFA+KD+FDV G+ TG GNP TA
Sbjct: 4 DLRAFMP---YPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTA 60
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P V +L GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV +
Sbjct: 61 PVVQTLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNE 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+ DF+LGTDTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ +
Sbjct: 121 VCDFALGTDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSA 180
Query: 185 VGRVLLQLAD---DVNLVRPSQVIFAEDCLQLSSIP--SDRVTQGLVKSVEKLFGGHIIE 239
V L AD D++ VR + D L S +P S + Q + + + + FG
Sbjct: 181 VAACL--FADERADLSGVR----LACHDGL-FSRLPLRSQQALQPVRQRLARFFGA---- 229
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVK 299
V L +P + + A R +Q YE G+ +
Sbjct: 230 -----------VTPL-----------TAPLPDVDDIYLAFRQIQGYEAWQAQGETIERYG 267
Query: 300 PDLGPGISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
LGP + ER W T AQ CQ + A A LGD +LV+PTVP P L
Sbjct: 268 LQLGPDVRERFFWGKAVTRAQFDAACQQ-RERFAAWWDAQLGD-AVLVMPTVPDGAPLLT 325
Query: 359 MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVET 418
+E R + LL I+ ++ QV++P+ LP+ IS L GSD L+ L
Sbjct: 326 AQAEEIEAVRRLSHDLLLISVMTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVELAAA 385
Query: 419 LHNTLKEE 426
+ E
Sbjct: 386 FMQGDRNE 393
>gi|423101800|ref|ZP_17089502.1| hypothetical protein HMPREF9686_00406 [Klebsiella oxytoca 10-5242]
gi|376390626|gb|EHT03309.1| hypothetical protein HMPREF9686_00406 [Klebsiella oxytoca 10-5242]
Length = 394
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 207/424 (48%), Gaps = 38/424 (8%)
Query: 7 DYGAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D AFM P AH L PLSGLTFA+KD+FDV G+ TG GNP T TA
Sbjct: 4 DIRAFMP---YPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGVKTRTA 60
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P V +L GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV +
Sbjct: 61 PVVQKLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNE 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
DF+LG+DTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ +
Sbjct: 121 ACDFALGSDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFST 180
Query: 185 VGRVLLQLAD-DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
V L D+ VR A S +P R Q L+ ++L
Sbjct: 181 VAACLFDDGRADITGVR-----LASHEGLFSRLPL-RSQQALLPVRQRL-------ARFF 227
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
G P +P + A R +Q YE G+ + LG
Sbjct: 228 GPLAPLDAP----------------LPDADDIYLAFRQIQGYEAWQAQGETIERYGLQLG 271
Query: 304 PGISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P + ER W T AQ CQ ++ A ALLGD +LV+PTVP P L
Sbjct: 272 PDVRERFFWGKAVTRAQFDAACQ-LRERFTAWWDALLGD-AVLVMPTVPDGAPLLTAQAE 329
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+E R + LL I+ ++ QV++P+ LP+ IS L GSD L+ L
Sbjct: 330 EIEAVRRLSHDLLLISVMTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVELAAAFMQG 389
Query: 423 LKEE 426
+ E
Sbjct: 390 DRNE 393
>gi|113867483|ref|YP_725972.1| amidase [Ralstonia eutropha H16]
gi|113526259|emb|CAJ92604.1| Amidase [Ralstonia eutropha H16]
Length = 396
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 209/394 (53%), Gaps = 29/394 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL+FA+KD+FDV G+ TG GNP +TAPAV +L GA +GKT DE+
Sbjct: 26 PLRGLSFAVKDLFDVAGYPTGGGNPHVLARSGIKAATAPAVQRLLDAGAAFVGKTHTDEL 85
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+NG+N HYG P N AP+R+ GGSSSGSA AV L DF+LG+DTGGSVR PAS+CG
Sbjct: 86 AFSMNGQNAHYGRPVNGAAPERITGGSSSGSASAVSNGLCDFALGSDTGGSVRAPASHCG 145
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FG RP+H +S +P+++S DT G+FA D RV VL +++F
Sbjct: 146 LFGIRPTHGRISLERCLPLSESLDTCGFFARDIGTFARVAEVLFGADPAPLPAA-PRLLF 204
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A D L + P+ L +V ++ LG V
Sbjct: 205 ATD---LFAQPTPEARDALAPAVARI-------ETALGRAAPATVADR------------ 242
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
L+ L A R +Q +E + G+ + +LG ++ R + + + D +
Sbjct: 243 ----PLSDLWWAFRYVQGWEAWRSDGELIEQHGLELGADVAARFAFSKAVTRSQFDEASA 298
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP-SALEVFRARAFSLLSIAGVSGFCQ 385
V+ + A L LLG G+LV+PT+P P L+ +P +LE +R A L + +SGF Q
Sbjct: 299 VRRDFTAHLGRLLGPDGVLVLPTMPDIAP-LRAEPIESLETYRNLAAQTLCLTPLSGFPQ 357
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+++PL D P+ ISLL GSD L+ L E +
Sbjct: 358 LNLPLAGRDGAPLGISLLGPAGSDRSLVALAERI 391
>gi|126728595|ref|ZP_01744410.1| amidase [Sagittula stellata E-37]
gi|126710525|gb|EBA09576.1| amidase [Sagittula stellata E-37]
Length = 390
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 209/403 (51%), Gaps = 41/403 (10%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+SA PL+GLT +KDI+DV G+ TG G P + APAV A+L GA +GK
Sbjct: 20 ASAGGGPLAGLTLGVKDIYDVAGYRTGSGCPTALAMSEVKQANAPAVDALLEAGAAFVGK 79
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T DE+A+S+ G N H+GTP NP APDR+PGGSSSGSAVAV A L D ++G+DTGGSVR
Sbjct: 80 THTDELAWSMYGMNAHFGTPVNPAAPDRIPGGSSSGSAVAVAAGLCDIAVGSDTGGSVRA 139
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ----LADDV 196
PAS+CGI+G RP+H +S V +A S+DT G FA D + L R VL++ L D
Sbjct: 140 PASFCGIWGIRPTHGVISLEAVQKLASSYDTCGLFARDGETLLRAMSVLMEDSAPLPDVP 199
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
L+RP ++ QL P R + FGG +E + Y + + +
Sbjct: 200 RLMRPLDML-----AQLG--PEQRAVY------DAAFGG--MEATEVSVYPEGVEATYKT 244
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
FL+ + + + + SS+M L++ + + + + +T + ++G
Sbjct: 245 FLTTMSADAKVDVVPFIR-SSSMPLVRGIDGRADAAEALTDAEAEVG------------- 290
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
++ + AA+ LLG G+L+ P V P +L + FR A LL
Sbjct: 291 --------RTARAAFTAAMDRLLGAEGVLLAPVVHDAPFRLDAPVEVFDGFRHDAMRLLC 342
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+AG++G QV +P D P +SL+ GSD L+ L
Sbjct: 343 VAGLAGLPQVVMPARKVDGAPYGVSLIGPRGSDLSLIRAAMAL 385
>gi|339325639|ref|YP_004685332.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338165796|gb|AEI76851.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 396
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 207/394 (52%), Gaps = 29/394 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL+FA+KD+FDV G+ TG GNP +TAPAV +L GA +GKT DE+
Sbjct: 26 PLQGLSFAVKDLFDVAGYPTGGGNPHVLARSGIKAATAPAVQRLLDAGAAFVGKTHTDEL 85
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+NG+N HYG P N APDR+ GGSSSGSA AV L DF+LG+DTGGSVR PAS+CG
Sbjct: 86 AFSMNGQNAHYGRPVNGAAPDRITGGSSSGSASAVSNGLCDFALGSDTGGSVRAPASHCG 145
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FG RP+H +S +P+++S DT G+FA D RV VL P ++
Sbjct: 146 LFGIRPTHGRISLERCLPLSESLDTCGFFASDIGTFARVAEVLFGADPAPLPAAPRLLVA 205
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ L P+ L +V ++ LG V
Sbjct: 206 TD----LFGQPTPEARGALAPAVARI-------EAALGRAAPVTVADR------------ 242
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
L+ L A R +Q +E ++ G+ + +LG ++ R + + + D +
Sbjct: 243 ----PLSELWWAFRYVQGWEAWHSDGELIEQHGLELGADVAARFAFSKAVTRSQFDEASA 298
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP-SALEVFRARAFSLLSIAGVSGFCQ 385
V+ + A + LLG G+LV+PT+P P L+ +P +LE +R A L + +SGF Q
Sbjct: 299 VRRDFTAHVGRLLGQDGVLVLPTMPDIAP-LRAEPVESLETYRNLASQTLCLTPLSGFPQ 357
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+++PL D P+ ISLL GSD L+ L E +
Sbjct: 358 LNLPLARRDGAPLGISLLGPAGSDRSLVALAERI 391
>gi|423113089|ref|ZP_17100780.1| hypothetical protein HMPREF9689_00837 [Klebsiella oxytoca 10-5245]
gi|376389631|gb|EHT02321.1| hypothetical protein HMPREF9689_00837 [Klebsiella oxytoca 10-5245]
Length = 394
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 210/427 (49%), Gaps = 44/427 (10%)
Query: 7 DYGAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D AFM P AH L PLSGLTFA+KD+FDV G+ TG GNP T TA
Sbjct: 4 DIRAFMP---YPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGVKTRTA 60
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P V +L GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV +
Sbjct: 61 PVVQKLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNE 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
DF+LG+DTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ +
Sbjct: 121 ACDFALGSDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFST 180
Query: 185 VGRVLLQLAD-DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLV---KSVEKLFGGHIIEN 240
V L D+ VR A S +P R Q L+ +++ +LFG
Sbjct: 181 VAACLFDDGRADITGVR-----LASHEGLFSRLPL-RSQQALLPVRQTLARLFG----PV 230
Query: 241 VILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKP 300
LG +P + + A R +Q YE G+ +
Sbjct: 231 TPLG----------------------APLPDVDDIYLAFRQIQGYEAWQAQGETIERYGL 268
Query: 301 DLGPGISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
LGP + ER W T AQ CQ + A A LGD +LV+PTVP P L
Sbjct: 269 QLGPDVRERFFWGKAVTRAQFDAACQQ-RERFTAWWDAQLGD-AVLVMPTVPDGAPLLTA 326
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+E R + LL I+ ++ QV++P+ LP+ IS L GSD L+ L
Sbjct: 327 QAEEIEAVRRLSHDLLLISVMTQRPQVTLPVARTGGLPLGISFLGPRGSDRLLVELAAAF 386
Query: 420 HNTLKEE 426
+ E
Sbjct: 387 MQGDRNE 393
>gi|423107210|ref|ZP_17094905.1| hypothetical protein HMPREF9687_00456 [Klebsiella oxytoca 10-5243]
gi|376389336|gb|EHT02028.1| hypothetical protein HMPREF9687_00456 [Klebsiella oxytoca 10-5243]
Length = 394
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 207/424 (48%), Gaps = 38/424 (8%)
Query: 7 DYGAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D AFM P AH L PLSGLTFA+KD+FDV G+ TG GNP T TA
Sbjct: 4 DIRAFMP---YPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGVKTRTA 60
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P V +L GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV +
Sbjct: 61 PVVQKLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNE 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
DF+LG+DTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ +
Sbjct: 121 ACDFALGSDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFST 180
Query: 185 VGRVLLQLAD-DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
V L D+ VR A S +P R Q L+ ++L +
Sbjct: 181 VAACLFDDGRADITGVR-----LASHEGLFSRLPL-RSQQALLPVRQEL-------ARLF 227
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
G P +P + + A R +Q YE G+ + LG
Sbjct: 228 GPVTPLGAP----------------LPDVDDIYLAFRQIQGYEAWQAQGETIERYGLQLG 271
Query: 304 PGISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P + ER W T AQ CQ + A A LGD +LV+PTVP P L
Sbjct: 272 PDVRERFFWGKAVTRAQFDAACQQ-RERFTAWWDAQLGD-AVLVMPTVPDGAPLLTAQAE 329
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+E R + LL I+ ++ QV++P+ LP+ IS L GSD L+ L
Sbjct: 330 EIEAVRRLSHDLLLISVMTQRPQVTLPVARTGGLPLGISFLGPRGSDRLLVELAAAFMQG 389
Query: 423 LKEE 426
+ E
Sbjct: 390 DRNE 393
>gi|385204948|ref|ZP_10031818.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385184839|gb|EIF34113.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 399
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 209/396 (52%), Gaps = 24/396 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL FA+KD+ DV TG GNP W +H+AA + A V +L+ GA GKTI DE+
Sbjct: 19 PLNGLRFAVKDLIDVASVTTGGGNPGWLASHAAARAHARCVDTLLAAGAALDGKTITDEL 78
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ GEN HYGTP NP P +PGGSSSGSA AV VDF+LGTDTGGSVRVPA++CG
Sbjct: 79 AYSLEGENHHYGTPLNPRWPHALPGGSSSGSASAVANGEVDFALGTDTGGSVRVPAAFCG 138
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FG RPSH A+ GV+P A FDTVGWFA +L VG VLL +A + S
Sbjct: 139 LFGMRPSHDAIPLDGVLPFAPCFDTVGWFARSIDVLAAVGDVLLPVAPSASTAYASG--- 195
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
++ RV + E+ L + + + SL F GN+ +
Sbjct: 196 -------RAVRLTRVAEAFAAR-ERNEADDAARLTALAERLGART-SLDVF--AGNQARW 244
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ + +Q E + G W+ + +P GPGI+ R Q+ ++
Sbjct: 245 LAC---------YQAVQDLEIDASLGAWIRSAQPRFGPGIAPRFARLDTLDRQQAAQWRT 295
Query: 327 VKTELRAALSALLG-DHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
V ELR+AL+ L D +LV+PT P + F + ++ SIA G Q
Sbjct: 296 VLHELRSALNTLFEIDRTVLVMPTTPVALLPKNASGDTIGRFYEDSLTMNSIAAFGGLPQ 355
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+++P + P+A+SL+ GSD LL+L L++
Sbjct: 356 ITLPFADELDRPLALSLIGARGSDRALLSLARDLYS 391
>gi|421724077|ref|ZP_16163321.1| amidase [Klebsiella oxytoca M5al]
gi|410375134|gb|EKP29771.1| amidase [Klebsiella oxytoca M5al]
Length = 394
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 213/428 (49%), Gaps = 46/428 (10%)
Query: 7 DYGAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D AFM P AH L PLSGLTFA+KD+FDV G+ TG GNP TA
Sbjct: 4 DLRAFMP---YPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTA 60
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P V +L+ GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV +
Sbjct: 61 PVVQTLLNNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNE 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+ DF+LGTDTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ +
Sbjct: 121 VCDFALGTDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSA 180
Query: 185 VGRVLLQLAD---DVNLVRPSQVIFAEDCLQLSSIP--SDRVTQGLVKSVEKLFGGHIIE 239
V L AD D++ VR + D L S +P S + Q + + + + FG
Sbjct: 181 VAACL--FADERADLSGVR----LACHDGL-FSRLPLRSQQALQPVRQRLARFFGA---- 229
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVK 299
V L +P + + A R +Q YE G+ +
Sbjct: 230 -----------VTPL-----------AAPLPDVDDIYLAFRQIQGYEAWQAQGETIERYG 267
Query: 300 PDLGPGISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
LG + ER W T AQ CQ + A A LGD +LV+PTVP P L
Sbjct: 268 LQLGSDVRERFFWGKAVTRAQFDAACQQ-RVRFAAWWDAQLGD-AVLVMPTVPDGAPLLT 325
Query: 359 MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVET 418
+E R + LL I+ ++ QV++P+ LP+ IS L GSD L+ L
Sbjct: 326 AQAEEIEAVRRLSHDLLLISVMTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVELAAA 385
Query: 419 LHNTLKEE 426
+ E
Sbjct: 386 FMQGDRNE 393
>gi|375259537|ref|YP_005018707.1| amidase [Klebsiella oxytoca KCTC 1686]
gi|397656606|ref|YP_006497308.1| amidase [Klebsiella oxytoca E718]
gi|365909015|gb|AEX04468.1| amidase [Klebsiella oxytoca KCTC 1686]
gi|394345180|gb|AFN31301.1| Amidase [Klebsiella oxytoca E718]
Length = 394
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 206/424 (48%), Gaps = 38/424 (8%)
Query: 7 DYGAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D AFM P AH L PLSGLTFA+KD+FDV G+ TG GNP TA
Sbjct: 4 DIRAFMP---YPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTA 60
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
P V +L GA IGKT E+AYS++G N HYGTP N AP+ +PGGSSSGSA AV
Sbjct: 61 PVVQKLLDNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNA 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
DF+LG+DTGGSVR PASYCG+FG RP+H +S G P+ + DT G+FA P++ +
Sbjct: 121 ACDFALGSDTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSA 180
Query: 185 VGRVLLQLAD-DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
V L D N VR + D L S +P R Q L+ ++L
Sbjct: 181 VAACLFDAERADFNGVR----LACHDGL-FSRLPL-RSQQALLPVRQRL-------ARFF 227
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
G P +P + A R +Q YE G+ + LG
Sbjct: 228 GPLAPLDAP----------------LPDADDIYLAFRQIQGYEAWQAQGETIERYGLQLG 271
Query: 304 PGISER-VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P + ER W T AQ CQ ++ A A LGD +LV+PTVP P L
Sbjct: 272 PDVRERFFWGKAVTRAQFDAACQ-LRERFTAWWDAQLGD-AVLVMPTVPDGAPLLTAQAE 329
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+E R + LL I+ ++ QV++P+ LP+ +S L GSD L+ L
Sbjct: 330 EIEAVRRLSHDLLLISVMTQRPQVTLPVAQTGGLPLGMSFLGPRGSDRLLVELAAAFMQG 389
Query: 423 LKEE 426
+ E
Sbjct: 390 DRNE 393
>gi|421748755|ref|ZP_16186306.1| amidase [Cupriavidus necator HPC(L)]
gi|409772486|gb|EKN54495.1| amidase [Cupriavidus necator HPC(L)]
Length = 370
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/389 (39%), Positives = 205/389 (52%), Gaps = 27/389 (6%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
+ GL FA KD+FDV G+ TG GNP +STAPAV +L GA +GKT DE+A
Sbjct: 1 MRGLRFAAKDLFDVAGYPTGGGNPHVLAMSGVKSSTAPAVQCLLDAGAKFVGKTHTDELA 60
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S+NG N HYG P N APDR+ GGSSSGSA AV L D +LGTDTGGSVR PAS+CG+
Sbjct: 61 FSMNGNNAHYGAPVNGAAPDRITGGSSSGSASAVSHGLCDLALGTDTGGSVRAPASHCGL 120
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG RP+H +S AG +P+ S DT G+FA D RV VLL D N + S +
Sbjct: 121 FGIRPTHGRISLAGCLPLCDSLDTCGFFARDIGTFARVADVLL--GPDANALPASVRLLL 178
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L + P+ R D + +Q L G+
Sbjct: 179 ADDLFALAEPAAR------------------------DALLPVAARIQDALGNGDAVAAA 214
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
P + L A R +Q +E + GD + LGP ++ R + +A + D V
Sbjct: 215 DRP-IGDLYWAFRYVQGWEAWRSDGDMIERYGLRLGPDVAARFAFSKEVTAGQRDEAMQV 273
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ A L+ALLGD G+L++PT+P P LE +R RA +L +AG+SGF Q++
Sbjct: 274 RRAFTAHLAALLGDDGVLLLPTMPDIAPLRDAALDTLEDYRNRAVQMLCLAGLSGFPQIT 333
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+PL + P+ +SLL GSD L+ L
Sbjct: 334 LPLCRRNGAPLGLSLLGPAGSDRTLVALA 362
>gi|255086029|ref|XP_002508981.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226524259|gb|ACO70239.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 582
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 208/428 (48%), Gaps = 20/428 (4%)
Query: 4 RDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
R AF E L+ ++ PL G+ F+I+D+FDV G VT G+P WA TH+ AT
Sbjct: 35 RSDALNAFQELLRLKGNAKG---PLRGIRFSIQDVFDVQGRVTSLGSPAWAATHAPATRD 91
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
APAV ++ + GA IG T MDE+ SI G + G P NP A D++PGGSSSG+AV+V
Sbjct: 92 APAVASLRAAGADCIGVTRMDELGCSITGCDAVDGAPINPVARDKIPGGSSSGAAVSVAG 151
Query: 124 --KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
K VD +L D+ G VRV A++CG++ R +H V+ G S GW + DP +
Sbjct: 152 APKEVDMALAVDSSGGVRVSAAHCGLYAIRTTHGTVALDGASSTTGSLAAAGWMSRDPDV 211
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKS---VEKLFGGHII 238
+ L+ L D + S+V+ ED + L D + G+ + ++ F I
Sbjct: 212 IAATATALIPLPKD--QISVSRVMVLEDAIDLC---DDIASCGVATACMLLKDAFKNGGI 266
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
+ LG ++ PSL+ + + L L + +RL++ E + G W +
Sbjct: 267 SRLNLGKHLLMACPSLREM------QNKDCATGLDVLRNCLRLIEGEEVWSQIGGWYSAE 320
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
KP+ G E + A + + + V + + E+RAA+ LL + ++PT P PP +
Sbjct: 321 KPETGAKAKEYLLGASKIATDSLRVIKQAREEVRAAVDLLLDGVTVFLLPTTPCAPPPMN 380
Query: 359 MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVE 417
A + + L ++ ++G Q++IPL P +S++A D +
Sbjct: 381 AGAEATATWERKVLQLTCLSSLTGTPQLTIPLTYEQAEGPYGLSVVAGRKQDYMCIEFAR 440
Query: 418 TLHNTLKE 425
L+E
Sbjct: 441 MFGAQLRE 448
>gi|163792910|ref|ZP_02186886.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [alpha proteobacterium BAL199]
gi|159181556|gb|EDP66068.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [alpha proteobacterium BAL199]
Length = 393
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 201/398 (50%), Gaps = 29/398 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST-APAVLAVLSGGATSIGKTIMDE 85
PL+GL+FA KD+FDV GH TG G+PDW ++ A AV +L GA +GKT+ DE
Sbjct: 24 PLTGLSFAAKDLFDVAGHRTGAGSPDWGQSDPVVPDRHAWAVQTLLDAGADLVGKTVTDE 83
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
++ I GE+ GTP N APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPAS+C
Sbjct: 84 VSLGILGESAFDGTPLNSKAPDRVPGGSSSGSAAAVAAGLCDTAIGTDTGGSVRVPASFC 143
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G++G RP+H + G++P A S DT GWFA D RV +L A L P+++I
Sbjct: 144 GLYGIRPTHGRLPLDGMMPQAPSSDTTGWFARDAATFARVSAAMLGEAIPSKL--PTRLI 201
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A D + + + L+ + L G +E
Sbjct: 202 VAVDAFGFADPETASALRQLLDRLSALIG--------------------------DTRED 235
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ P L+ A R LQ E DW+ P + ++ + S + +
Sbjct: 236 LLAPPGLSVWGRAQRTLQPAEAYATFKDWLDRDNPRMAFNVARGLVMGSMISEADLGWAR 295
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
++ E RA L+ LL IL +PT P P P + S R R L + G++GF Q
Sbjct: 296 LMRQEARARLTYLLPPGTILAMPTTPFPAPLKGLPLSQQNPIRERILCLAAHGGLAGFPQ 355
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
VSIP +LPV +S+LA G+D L+ + + L +
Sbjct: 356 VSIPGAEVGSLPVGLSILAARGADAQLVAIAQALEEAI 393
>gi|332141007|ref|YP_004426745.1| amidase [Alteromonas macleodii str. 'Deep ecotype']
gi|327551029|gb|AEA97747.1| amidase [Alteromonas macleodii str. 'Deep ecotype']
Length = 423
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 203/387 (52%), Gaps = 37/387 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL A+KD+F + G T GNPDW TH +T V +L+ GA+ GKTI DE+A
Sbjct: 56 LKGLGLAVKDLFHIKGLPTAAGNPDWQATHDIPQATNTCVATMLNAGASFKGKTITDELA 115
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS++G+NKHY NP AP +PGGSSSGSAVAV A L D LGTDTGGS+RVPASY G+
Sbjct: 116 YSLHGQNKHYAPLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPASYQGL 175
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R +H + ++ +A SFDT+GW D L +V + D+ I A
Sbjct: 176 WGLRTTHGLLPCDNMVALAPSFDTIGWMTRDLDTLQKVAHTCI---DNTK----QSTIKA 228
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK---- 263
C +++ LF + + + ++ + L++ N+
Sbjct: 229 NPCFGIAT---------------PLF-ANTAHSSVCNKWLTE--------LADNNRCVAL 264
Query: 264 -EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E++ + L ++ R+LQ E HG+W+ TV+PD+ I R+ + Q +
Sbjct: 265 TEEQLDLFKLQT-AATFRILQGSEIWQQHGEWIETVQPDIAKDIMLRLAWCKTITTQDVT 323
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ ++ + + ++AL D +LVIPT PG P+ D + L R +L +IAG++G
Sbjct: 324 LAKAQQKVVIDHINALFNDFDVLVIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAG 383
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSD 409
Q+ +PL N P +SL+ K G+D
Sbjct: 384 LPQLHLPLFTLHNAPCGLSLVGKKGND 410
>gi|383756560|ref|YP_005435545.1| putative amidase family protein [Rubrivivax gelatinosus IL144]
gi|381377229|dbj|BAL94046.1| putative amidase family protein [Rubrivivax gelatinosus IL144]
Length = 403
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 213/414 (51%), Gaps = 37/414 (8%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+E F + P S L GL+FA+KD D+ T +G+ W TH A A V
Sbjct: 11 AFVELFEIPPYRSGA---LEGLSFAVKDNIDIRDRSTSYGSKPWRETHPPAAHHAVCVEQ 67
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L GA +GKT+ DE+ YS++GEN YGTP NP APDR+PGGSSSGSA AV LVDF+
Sbjct: 68 LLMAGARCVGKTVADELTYSLDGENHFYGTPVNPRAPDRIPGGSSSGSASAVACGLVDFA 127
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTD GGS+RVPAS CG++G RPS +S AGV+P A S TVG A +L + RVL
Sbjct: 128 LGTDCGGSIRVPASLCGVYGMRPSLHRISEAGVLPFAPSVSTVGVLARTLPVLRQAMRVL 187
Query: 190 LQ-LADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
L+ A + VR + +D +++ G V S + L +V
Sbjct: 188 LRSQAQALPPVR--NIYLLQDAFEIADPAIRDALSGCVASFDGL------------PHVT 233
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
K SL+ + Y+ A+R+LQ E N G W+ +P+ GP
Sbjct: 234 VKSISLREITGLDLSLRSYN-------EDALRVLQTAEIANALGGWIRASQPEQGPNFRA 286
Query: 309 --RVWEAVRTSAQK--IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM----D 360
R E+ SA +++C++ L A ++A + PTVP PK + +
Sbjct: 287 GYRNVESFDRSAMSDALNLCEA----LFARVAAFTRPGDVFCYPTVPVLAPKKGVLTGRN 342
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
A+ + R ++ S AGV+ ++++PL D LPV +SL A H D FLL+
Sbjct: 343 LDAVLDYYDRTMAVTSFAGVARLPEITVPLAQVDGLPVGLSLAAGHYQDEFLLD 396
>gi|410861256|ref|YP_006976490.1| amidase [Alteromonas macleodii AltDE1]
gi|410818518|gb|AFV85135.1| amidase [Alteromonas macleodii AltDE1]
Length = 423
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 197/387 (50%), Gaps = 37/387 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL A+KD+F + G T GNPDW TH +T V +L+ GA+ GKTI DE+A
Sbjct: 56 LKGLGLAVKDLFHIKGLPTAAGNPDWQATHDIPQATNTCVATMLNAGASFKGKTITDELA 115
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS++G+NKHY NP AP +PGGSSSGSAVAV A + D LGTDTGGS+RVPASY G+
Sbjct: 116 YSLHGQNKHYAPLVNPVAPANIPGGSSSGSAVAVSAHIADIGLGTDTGGSIRVPASYQGL 175
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R +H + ++ +A SFDT+GW D L +V A
Sbjct: 176 WGLRTTHGLLPCDNMVALAPSFDTIGWMTRDLDTLQKV---------------------A 214
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN----- 262
C+ D Q +K V FG I + + L++ N
Sbjct: 215 HTCI-------DNTKQSTIK-VNPRFG--IATPLFANTAHSSECNKWLTELADNNPCVAL 264
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E++ + L ++ R+LQ E HG+W+ V+PD+ I R+ + Q +
Sbjct: 265 TEEQLDLSKLQT-AATFRILQGSEIWQQHGEWIEKVQPDIAKDIMLRLAWCKTITTQDVT 323
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ ++ + + ++AL D +LVIPT PG P+ D + L R +L +IAG++G
Sbjct: 324 LAKAQQKVVIDHINALFNDFDVLVIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAG 383
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSD 409
Q+ +PL N P +SL+ K G+D
Sbjct: 384 LPQLHLPLFTLHNAPCGLSLVGKKGND 410
>gi|406669781|ref|ZP_11077044.1| hypothetical protein HMPREF9707_00947 [Facklamia ignava CCUG 37419]
gi|405581751|gb|EKB55760.1| hypothetical protein HMPREF9707_00947 [Facklamia ignava CCUG 37419]
Length = 411
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 199/396 (50%), Gaps = 34/396 (8%)
Query: 23 AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
A + PL G+ FA+KD+FD+ G G+P W +TH AT T+ ++ +L GA +GKTI
Sbjct: 36 AAEGPLKGMAFAVKDVFDIVGSTYSNGHPMWLQTHEPATETSSFIVNMLEAGADLVGKTI 95
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
DE+ YSI+GEN +YG+P NP P R GGSSSG+ AV VD + G+D GSVRVPA
Sbjct: 96 CDELCYSISGENWNYGSPLNPHDPRRYCGGSSSGTGAAVAGGYVDVAFGSDCLGSVRVPA 155
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+Y G+ G RP+ V +G P +S D +G+ A DP + +V + L +D +
Sbjct: 156 AYNGVLGIRPTLYRVDNSGEAPYCKSMDVLGYVAQDPDVFEQVSEFI--LGEDQHQQSLK 213
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG--GHIIENVILGDYVKDKVPSLQHFLSE 260
++ D L + D V + L S+ ++ G ++E I ++D V QH
Sbjct: 214 RLFIPVDLL---DVVDDNVREHLKSSIGRIKGYFDEVVEGKICPGDLQDWVKVFQH---- 266
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-WEAVRTSAQ 319
+Q YE ++G W +P L G R+ W + T AQ
Sbjct: 267 ---------------------IQGYEVWESYGGWYRKYRPQLSEGPGSRLEWASTITYAQ 305
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
++ + E+ + ++ + ++V+PT P ++ R ++ LL I+
Sbjct: 306 YQAALEA-REEIIKQVDQVITEDTVVVLPTAASIAPLRTDSEESINHTRLQSSQLLCISP 364
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+SG QV++P+ + +P+ +SLL+ SD L+ L
Sbjct: 365 LSGVPQVTLPIATMEEVPLGVSLLSPRHSDLQLVKL 400
>gi|326402417|ref|YP_004282498.1| putative amidase [Acidiphilium multivorum AIU301]
gi|325049278|dbj|BAJ79616.1| putative amidase [Acidiphilium multivorum AIU301]
Length = 389
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 187/383 (48%), Gaps = 38/383 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +KD+FD+ G VT FGNPDW R A S A V +L GA GKT E+
Sbjct: 28 PLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTTVEL 87
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ + G N HYGTP NP APDR+PGGSSSGS V + +G+DTGGSVR+PASYCG
Sbjct: 88 AFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPASYCG 147
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+ +S AG P+A SFDT GWF D
Sbjct: 148 LYGLRPTQGLLSLAGAAPLAPSFDTPGWFTRD---------------------------- 179
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE-GNKEQ 265
AE L RV + L+ L ++ + D V +L+ L+ G +
Sbjct: 180 AETML--------RVGEALLPPAPPLAAQFLMIPAAFANADPDVVAALEPALARLGPMGE 231
Query: 266 EYSIPS-LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+P L + + ++ E G ++ TVKP L P + R+ +A+
Sbjct: 232 ADPVPEGLDRMLAWQNAVRGRETWLTLGGFIETVKPLLDPVTAGRIAATRGFTAEAAAEG 291
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ + A + ALL +LVIPT P P P + + + E R R + IA +G
Sbjct: 292 RVARRAHTARMHALLAGGAVLVIPTSPCPAPPVAAEQAVYEDVRTRTLRVGIIAAFAGLP 351
Query: 385 QVSIPLGLHDNLPVAISLLAKHG 407
+++IP+G + PV +SL+A G
Sbjct: 352 ELTIPVGKVNGAPVGLSLIAGPG 374
>gi|338980776|ref|ZP_08632030.1| Amidase [Acidiphilium sp. PM]
gi|338208301|gb|EGO96170.1| Amidase [Acidiphilium sp. PM]
Length = 389
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 187/383 (48%), Gaps = 38/383 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +KD+FD+ G VT FGNPDW R A S A V +L GA GKT E+
Sbjct: 28 PLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTTVEL 87
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ + G N HYGTP NP APDR+PGGSSSGS V + +G+DTGGSVR+PASYCG
Sbjct: 88 AFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPASYCG 147
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+ +S AG P+A SFDT GWF D
Sbjct: 148 LYGLRPTQGLLSLAGAAPLAPSFDTPGWFTCD---------------------------- 179
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE-GNKEQ 265
AE L RV + L+ L ++ + D V +L+ L+ G +
Sbjct: 180 AETML--------RVGEALLPPAPPLAAQFLMIPAAFANADPDVVAALEPALARLGPMGE 231
Query: 266 EYSIPS-LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+P L + + ++ E G ++ TVKP L P + R+ +A+
Sbjct: 232 ADPVPEGLDRMLAWQNAVRGRETWLTLGGFIETVKPLLDPVTAGRIAATRGFTAEAAAEG 291
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ + A + ALL +LVIPT P P P + + + E R R + IA +G
Sbjct: 292 RVARRAHTARMHALLAGGAVLVIPTSPCPAPPVAAEQAVYEDVRTRTLRVGIIAAFAGLP 351
Query: 385 QVSIPLGLHDNLPVAISLLAKHG 407
+++IP+G + PV +SL+A G
Sbjct: 352 ELTIPVGKVNGAPVGLSLIAGPG 374
>gi|148259263|ref|YP_001233390.1| amidase [Acidiphilium cryptum JF-5]
gi|146400944|gb|ABQ29471.1| Amidase [Acidiphilium cryptum JF-5]
Length = 389
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 187/383 (48%), Gaps = 38/383 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +KD+FD+ G VT FGNPDW R A S A V +L GA GKT E+
Sbjct: 28 PLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTTVEL 87
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ + G N HYGTP NP APDR+PGGSSSGS V + +G+DTGGSVR+PASYCG
Sbjct: 88 AFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPASYCG 147
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+ +S AG P+A SFDT GWF D
Sbjct: 148 LYGLRPTQGLLSLAGAAPLAPSFDTPGWFTRD---------------------------- 179
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE-GNKEQ 265
AE L RV + L+ L ++ + D V +L+ L+ G +
Sbjct: 180 AETML--------RVGEALLPPAPPLAAQFLMIPAAFANADPDVVTALEPALARLGPMGE 231
Query: 266 EYSIPS-LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+P L + + ++ E G ++ TVKP L P + R+ +A+
Sbjct: 232 ADPVPEGLDRMLAWQNAVRGRETWLTLGGFIETVKPLLDPVTAGRIAATRGFTAEAAAEG 291
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ + A + ALL +LVIPT P P P + + + E R R + IA +G
Sbjct: 292 RVARRAHTARMHALLAGGAVLVIPTSPCPAPPVAAEQAVYEDVRTRTLRVGIIAAFAGLP 351
Query: 385 QVSIPLGLHDNLPVAISLLAKHG 407
+++IP+G + PV +SL+A G
Sbjct: 352 ELTIPVGKVNGAPVGLSLIAGPG 374
>gi|418532957|ref|ZP_13098850.1| amidase [Comamonas testosteroni ATCC 11996]
gi|371450017|gb|EHN63076.1| amidase [Comamonas testosteroni ATCC 11996]
Length = 417
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 206/422 (48%), Gaps = 35/422 (8%)
Query: 9 GAFM-EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
GAF+ E F P + L+G+ +KDIF V G G G P W A +APAV
Sbjct: 19 GAFVREGFGTAPPFTPTGNALAGMRMGVKDIFLVQGQRMGGGTPAWGAQQPIAQESAPAV 78
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
L GA IGKT+ DE+AYS+ G N HYG P N AP R+PGGSSSGSA AV A VD
Sbjct: 79 QLCLEAGAHWIGKTVTDELAYSLAGINHHYGMPYNAGAPGRLPGGSSSGSAAAVSAGDVD 138
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F+LGTD GGS R+PASYCGI+G R + + G +A SFDTVGWFA + + R+
Sbjct: 139 FALGTDAGGSCRLPASYCGIWGIRTTQGRLPGGG-FKLAPSFDTVGWFAKSGEDMARIHA 197
Query: 188 VLLQLADDVNLVRPS-QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY 246
V+ A V+ +P Q++ ED L H+ + + +
Sbjct: 198 VIDNEA--VHEAQPDLQILLFEDAL------------------------HVCDPDVRTMF 231
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ D LQ G +P LA + A R+L E + HGDWVT LG +
Sbjct: 232 MDD----LQRLGLNGQWLPAGELP-LAHWAQAHRILAGAETWSIHGDWVTAHGAALGADV 286
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILV-IPTVPGPPPKLQMDPSALE 365
R A + + + + V Q+++ L L D G V +PTVPGP P L+
Sbjct: 287 RARFGFASQAAQEDLAVWQALRDAATRMLDKLFADTGAFVLLPTVPGPAPMRDTAAHELQ 346
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A LL IAG++G QVS P D PV +S++ +D +L H +
Sbjct: 347 RMREMAQQLLCIAGLAGLPQVSFPWRNVDGAPVGMSVIGPRDADAQVLAAAIDCHKRMTT 406
Query: 426 EL 427
++
Sbjct: 407 DI 408
>gi|359396853|ref|ZP_09189904.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Halomonas
boliviensis LC1]
gi|357969531|gb|EHJ91979.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Halomonas
boliviensis LC1]
Length = 416
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 210/413 (50%), Gaps = 35/413 (8%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+E F + P +S L GL FA+KD D+ T +G+ W H A A V
Sbjct: 11 AFVELFEIAPYASGT---LDGLCFAVKDNIDIRDRFTSYGSKPWREAHPRAAYNAVCVEQ 67
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L GA +GKTI DE YS++GE+ YGTP NP APDR+PGGSSSGSA AV LVDF+
Sbjct: 68 LLMAGARCVGKTIADEFTYSLDGESYFYGTPVNPRAPDRIPGGSSSGSASAVACGLVDFA 127
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTD GGS+R+PAS CG+FG RPS +S AGV+P A S TVG A + IL + RVL
Sbjct: 128 LGTDCGGSIRIPASLCGVFGMRPSLHRISEAGVLPFAPSVSTVGVLAQNLPILRQTMRVL 187
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L+ + DV + + ++ L +D Q + G NV +
Sbjct: 188 LR-SHDVAVPPVKNIYLVKEAFAL----ADPAIQNALSECITHLGN--FPNVTVASVSLR 240
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS-- 307
+ L L N++ A+R+LQ E N G W+ +P+ GP
Sbjct: 241 DITGLDVSLKSCNED-------------ALRILQTAEVANAIGGWIQENRPEQGPNFQAG 287
Query: 308 -ERVWEAVR-TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM----DP 361
V + R T + +++C+++ + R A GD I PT P PK +
Sbjct: 288 YRNVEQFDRSTMSDALNLCEALFS--RVAAFTQPGD--IFCYPTAPVLAPKKGTLTGSNL 343
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
+++ + R ++ S AGV+ +++IPL + +PV +SL A H D FLL+
Sbjct: 344 NSVLDYYDRTMAVTSFAGVARLPEITIPLAQVNGIPVGLSLTAGHYQDEFLLD 396
>gi|331699129|ref|YP_004335368.1| amidase [Pseudonocardia dioxanivorans CB1190]
gi|326953818|gb|AEA27515.1| Amidase [Pseudonocardia dioxanivorans CB1190]
Length = 547
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 187/393 (47%), Gaps = 28/393 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GLT A+KD+ V G G GNP W +APAV +L+ GA G DE A
Sbjct: 171 LDGLTVAVKDVLAVAGERMGLGNPTWLADQEPEARSAPAVQQLLAAGAAITGIARTDEFA 230
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G+N+HYGTP NP AP + GGS+SG A AV VD LGTDT GS+RVPASY G+
Sbjct: 231 YSLAGQNRHYGTPPNPAAPGCLSGGSTSGPAAAVALGQVDIGLGTDTAGSLRVPASYQGL 290
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G R SH A+S GV P+A SFDTVGW D + RV VLL +V + VI A
Sbjct: 291 VGVRTSHGAISVEGVHPLAPSFDTVGWLTRDVDVAARVADVLLAHRPNVAPGSRTAVIPA 350
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ + + RVT L +L G ++ V D D++
Sbjct: 351 LRGWINAELDT-RVTAALA----ELTGAGVLAPVEDADLAHDEI---------------- 389
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
A + A R+LQ +E G W GP + R A +A + D +
Sbjct: 390 -----TAWARAFRVLQAFEVWQGQGGWARDHPGAFGPDVGGRFAFAATVTADQADTARET 444
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ R L LL D +LV+P GP P L +E R L +A ++G V+
Sbjct: 445 VRDARERLRRLLADT-VLVLPASSGPAPSLHAGKDIVEDERTATVRLTQLASLAGAPAVA 503
Query: 388 IP-LGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+P L + D PV + L+ +D LL L T+
Sbjct: 504 LPVLWMSDGRPVGLCLVGAPDTDRALLALGRTV 536
>gi|110635048|ref|YP_675256.1| amidase [Chelativorans sp. BNC1]
gi|110286032|gb|ABG64091.1| Amidase [Chelativorans sp. BNC1]
Length = 395
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 214/424 (50%), Gaps = 43/424 (10%)
Query: 3 SRDSDYGAFMEKFVLQPSSSAHQLP---LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA 59
+RDS + F+ P ++ P L GL+F +KDI+DV G+ TG GNP
Sbjct: 4 TRDS-----LNAFLDYPQTAVPSSPTGLLRGLSFGVKDIYDVAGYPTGCGNPQKEAERGP 58
Query: 60 ATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAV 119
+ ++PA+ A+L GA GKT DE+A+S+ G N H+ P NP AP+RV GGSSSGSA
Sbjct: 59 VSHSSPAIQALLDAGAAFAGKTQTDELAFSMMGMNAHFPPPVNPRAPERVTGGSSSGSAA 118
Query: 120 AVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP 179
AV L DF++G+DT GSVR+PAS+CG+ G R +H +S G +P+A SFDT GWFA D
Sbjct: 119 AVAGGLADFAIGSDTNGSVRIPASFCGLIGLRTTHGRISMEGAMPLAPSFDTFGWFARDA 178
Query: 180 KILNRVGRVLLQLADDVN---LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
+ VG VL L +D + L P ++ E +LFG
Sbjct: 179 RTYEAVGEVL--LGEDFHGGTLRSPVRISEFE---------------------ARLFG-- 213
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP-SLAALSSAMRLLQRYEFKNNHGDWV 295
E+ G+ + L HF G ++P + L R +Q +E + ++
Sbjct: 214 QAESAAYGEMLGR---VLDHF---GKSAGYVALPGEIEDLYECFRQIQAHEAWLSQAYFL 267
Query: 296 TTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP 355
+ +LGPG+ ER S + + + + E +A +AL+ ++V+PT P P
Sbjct: 268 SQQDRELGPGVKERFAYGRSISDETAENARRRRREFQADFNALMRPDMVVVMPTQPSAAP 327
Query: 356 KLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
E +R R +L IAG+ G+ Q+SIPLG P ISLL GSD L+ L
Sbjct: 328 LKIATLEEQESYRHRGLALTCIAGLLGWPQISIPLGEVHGAPFGISLLGPAGSDRQLIRL 387
Query: 416 VETL 419
+
Sbjct: 388 ASKI 391
>gi|381398558|ref|ZP_09923961.1| Amidase [Microbacterium laevaniformans OR221]
gi|380774049|gb|EIC07350.1| Amidase [Microbacterium laevaniformans OR221]
Length = 521
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 202/409 (49%), Gaps = 31/409 (7%)
Query: 23 AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
A + PLSGLT A+KD+F + G+ G GNP + + A T++APAV +L GGA+ G
Sbjct: 134 AWEGPLSGLTVAVKDLFAIKGYRIGAGNPTYLDSARAETTSAPAVGDLLRGGASLRGIAR 193
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
DE AYSI G+N HYGTP N P +PGGSSSG A AV D +L TDT GSVRVPA
Sbjct: 194 TDEFAYSIAGDNAHYGTPPNAAVPGALPGGSSSGPASAVALGHADIALATDTAGSVRVPA 253
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL--ADDVNLVR 200
SY G++G R +H V G++P+AQSFDTVGW D L V L +D + V
Sbjct: 254 SYQGLWGLRTTHDLVPRQGLLPLAQSFDTVGWLTRDGATLQAVADWCLSYDGSDSTDSVF 313
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
+ A D +P VE L + ++H +S
Sbjct: 314 GAS---AADLPWRFRVP-----------VEALAAAEPATRAAFEAMIAASALPVEH-VSL 358
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
G+ + EY P R +Q E N+GDW+ GP ++ R A +A
Sbjct: 359 GDLD-EYLGP--------FRTVQGAEAWRNNGDWLRAHPGSTGPAVAARFRAAAAVTAAD 409
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
++ LR L AL+ D +L++PTVPGP P + +E R L + A V
Sbjct: 410 ESAARAALQPLRDTLHALVRD-AVLLLPTVPGPAPSRSATGAQVEAVRTDTLRLTTPAPV 468
Query: 381 SGFCQVSIPL----GLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
G +S+PL G + PV +SL+++ G+D L+ L LH + E
Sbjct: 469 GGLPALSVPLLTVDGAGGSAPVGVSLVSRAGTDIALVRLGRALHARITE 517
>gi|424883497|ref|ZP_18307125.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392515158|gb|EIW39891.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 410
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 216/412 (52%), Gaps = 50/412 (12%)
Query: 9 GAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
GAF+ + + ++A Q L+GLTFA+KD+ D+ G TG GNPDW + A + AP V
Sbjct: 31 GAFVPGEIFRLDATA-QGSLAGLTFAVKDLIDIAGRRTGGGNPDWRAAATPAAAHAPVVT 89
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
+L+ GAT +GKT+ DE+A+S+ G N HYG P NP PD +PGGSSSGSA AVGA+LVDF
Sbjct: 90 RLLANGATFLGKTVTDELAFSLEGRNIHYGIPRNPQNPDWLPGGSSSGSAAAVGARLVDF 149
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
+LGTDTGGSVRVPA++ GI+G RPSH AV GV+P A S+DT+GWFA D + L RVG V
Sbjct: 150 ALGTDTGGSVRVPAAFSGIWGMRPSHYAVPLDGVLPFAPSYDTIGWFARDAQTLARVGDV 209
Query: 189 LLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
LL A V+ + S V ED L + P+D + +L ++ V
Sbjct: 210 LLPPAQHVDCLTISIV---EDTLDMLD-PTD--AHAFRDAARRLANAAPMQ-------VF 256
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
+ PS Q L A +Q YE + G + +KP I E
Sbjct: 257 EHWPSAQ-------------------LQWAYSTIQGYEIARSLGSRLDALKPRFAMDIGE 297
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV-- 366
R A S + +V+ L L + ++P P L++D + E+
Sbjct: 298 RFASASAVSYADYETAAAVRQSFAGWLQDRLPPGTVALLPVTSA--PHLRIDAPSEEIGR 355
Query: 367 FRARAFSLLSIAGVSGFCQV---SIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
F A +L ++AG +G Q+ S PL S++ + GSD +LN
Sbjct: 356 FYASTLALTALAGHAGAPQLQCGSSPL----------SVMGRCGSDRAILNF 397
>gi|53804699|ref|YP_113430.1| amidase [Methylococcus capsulatus str. Bath]
gi|53758460|gb|AAU92751.1| amidase family protein [Methylococcus capsulatus str. Bath]
Length = 341
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 26/359 (7%)
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
L GA +GKT DE+A+ + GEN YGTP NP APDRVPGGSSSGSAVAV A VDF+
Sbjct: 6 CLQAGAVCLGKTCADELAFGLTGENAFYGTPLNPAAPDRVPGGSSSGSAVAVAAGEVDFA 65
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDT GS+R+PAS CGI+G RPSH VS AGV P+A FDTVG FA + + L RV +L
Sbjct: 66 LGTDTAGSIRLPASNCGIWGMRPSHGGVSVAGVNPLAPGFDTVGAFARNGETLQRVMSLL 125
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L + D ++ V + E +V K FG + + G +
Sbjct: 126 LNV-DPLSTVSGRLWLLQEG------------FDAAEPAVRKAFG--PVLKRLAGSFPSR 170
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
++ SL+ + E + + + +Q E + G W+ + +P LG
Sbjct: 171 EI-SLRSI------DGEAGVSGMDNWRQVFQPIQWAEIWSTLGTWIESARPALGERTRRN 223
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEV 366
A + + + + RAAL+ +LG ++ PTV P P L +D + +
Sbjct: 224 FELAKGLDRRLLPAALARRERYRAALARVLGPEDVICFPTVHAPAPLKGSLGLDRTQGDY 283
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
F R + ++IAG+ Q+S+P + PV +SLLA G+D FL+ + + L +
Sbjct: 284 F-PRVLARMAIAGICRLPQISLPAVEVEGAPVGLSLLAAEGNDAFLMAFAQGVAAVLDD 341
>gi|323357775|ref|YP_004224171.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium
testaceum StLB037]
gi|323274146|dbj|BAJ74291.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium
testaceum StLB037]
Length = 560
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 201/414 (48%), Gaps = 47/414 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GLT A+KD+F + G G GNP + TAPAV +L GA+ G DE A
Sbjct: 181 LAGLTVAVKDLFAIAGFRIGAGNPAFLEEARPEKVTAPAVADLLRAGASLRGIARTDEFA 240
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YSI G+N HYGTP N +PGGSSSG A AV A D L TDT GS+RVPASY G+
Sbjct: 241 YSIAGDNVHYGTPPNGAVVGALPGGSSSGPASAVAAGHADIGLATDTAGSIRVPASYQGL 300
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL-------------AD 194
+G R +H V G++P+AQSFDT+GW D L RV L D
Sbjct: 301 WGLRTTHDLVPRQGMLPLAQSFDTIGWLTRDGDTLQRVADWCLSYDGSATTENVYGASGD 360
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
D+ P + + E+ L+ + P+ R + K V L D P
Sbjct: 361 DL----PWRFLVPEEILECAE-PATR--EAFSKLVAAL-------------AASDDPPPF 400
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV 314
+ + G+ + + +A R +Q E N+G+W+T +GP ++ER A
Sbjct: 401 RA-VHTGDLDAAF---------AAFRTVQGAEAWRNNGEWMTAHPGAVGPAVAERFSVAS 450
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
R +A + + A L+ L+ D +L+ PTVPGP P+ D ++ RA +
Sbjct: 451 RIAAADEAAAREDLEPIAAHLAELV-DGAVLIFPTVPGPAPQRTAD---VDAVRAATLRM 506
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQ 428
+ A ++G +S+PL D PV + L+++ G+D L+ L L ++ L+
Sbjct: 507 TAPAAIAGLPSISVPLLTVDGAPVGLCLVSRAGTDIALVRLARRLAALVEGGLR 560
>gi|308804720|ref|XP_003079672.1| amidase family protein (ISS) [Ostreococcus tauri]
gi|116058128|emb|CAL53317.1| amidase family protein (ISS) [Ostreococcus tauri]
Length = 447
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 214/411 (52%), Gaps = 25/411 (6%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDW--ARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
L G+ A+KD DV G G GNP + R AT+ AP V VL+ GA +GKT MDE
Sbjct: 34 LRGMRVAVKDNVDVRGMRAGAGNPTYLETRGREPATAHAPCVDKVLAAGARFVGKTHMDE 93
Query: 86 MAYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
+A+S+ GEN HYGTPTN P R+PGGSSSGSA AV D ++GTDT GSVR+PAS
Sbjct: 94 LAWSLQGENFHYGTPTNARGKIPGRIPGGSSSGSASAVCCGHADVAIGTDTIGSVRLPAS 153
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL----QLADDVNLV 199
+CG++G RP+H V GV+P++ SFDTVGWF D K L +G +LL + A+ +
Sbjct: 154 FCGVYGARPTHGRVDATGVVPLSHSFDTVGWFTKDAKTLRVMGEILLDPETRDAETSAKI 213
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKS--VEKLFGGHIIENVILGDYVKDKVPSLQHF 257
++ D +L + ++ S V+++F GD + D + +
Sbjct: 214 GRGRLAACSDAFRLVDPAVKQAMNAVLSSEGVKRVF------KDARGDAMPDAMGIVHLV 267
Query: 258 LSE---GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA- 313
LS+ +K E +P + S R++Q E + HG W+ KP GPGI +R A
Sbjct: 268 LSDLALTDKSGERVLPPITEWSETFRVIQTREVWDAHGGWIKEHKPVFGPGIRDRFRAAE 327
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFR 368
+ A +D +++ + L ALL D IL++P GP P + L R
Sbjct: 328 IGVDAATMDHHVALRERITNHLDALLADGTILILPAARGPAPAATDYNSEASLKKLAEAR 387
Query: 369 ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ A +L + A ++ V IP + PV + L+++ G+D LL E L
Sbjct: 388 SVALALGAPASLARLPCVVIPAVEIEGEPVGLMLMSRRGTDEALLAFAEKL 438
>gi|152966046|ref|YP_001361830.1| amidase [Kineococcus radiotolerans SRS30216]
gi|151360563|gb|ABS03566.1| Amidase [Kineococcus radiotolerans SRS30216]
Length = 546
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 194/391 (49%), Gaps = 24/391 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD+ V G TG G P W APA+ A+L GA G DE+
Sbjct: 165 PLTGIRVAVKDLVAVAGQRTGGGVPRWLEQARTEPVNAPALQALLDAGAGIAGIAQTDEL 224
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+ G N H+G P NP AP RVPGGSSSG A AV + D LGTDT GS+RVP S+ G
Sbjct: 225 AFSLLGVNAHHGVPPNPAAPGRVPGGSSSGCAAAVASGTADLGLGTDTAGSLRVPGSFSG 284
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++ +RP+H AV AGV+P+A +FDTVG A D + V L RP ++
Sbjct: 285 LYAWRPTHGAVDAAGVLPLAPTFDTVGLLARD-AGVLAVAAAALLTGPTHPPARPRALLR 343
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHFLSEGNKEQ 265
+ Q++ + + ++++ G + + +G D+ ++V
Sbjct: 344 SRTLFQVAEPATALAVEAALRALAVQTGLPLRDVDDVGVDFTGEEV-------------- 389
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
A ++A R +Q E +HG ++T L P + R A+ ++ +
Sbjct: 390 -------TAWTTAFRTVQAAEAWASHGAFITANPGALSPAVEARFRAGEGVGAETLNAAR 442
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ RA L+A+L G L +P+ P P+++ P E RA L ++A +G
Sbjct: 443 TTIEATRARLTAVL-RGGWLCLPSTATPAPRIEATPDRFEAVRAGTLPLTTLASQTGVPA 501
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+++P G +LPV + +LA HG D LL L+
Sbjct: 502 LNLPWGRVGDLPVGLCVLAPHGQDRSLLALL 532
>gi|388568366|ref|ZP_10154785.1| amidase [Hydrogenophaga sp. PBC]
gi|388264411|gb|EIK89982.1| amidase [Hydrogenophaga sp. PBC]
Length = 393
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 182/382 (47%), Gaps = 31/382 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL A+KD+ DV G TG GNPDWA +H + A V + + GA IGKTI DE+A
Sbjct: 26 LDGLRLAVKDLIDVAGAPTGGGNPDWADSHPVPDADAACVAMLRAAGARVIGKTITDELA 85
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S+ GEN +GTP +P PDR+PGGSSSGSA AV D +LGTDTGGSVRVPAS+CG+
Sbjct: 86 FSLEGENAFFGTPRHPLQPDRLPGGSSSGSAAAVAWGEADIALGTDTGGSVRVPASFCGV 145
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
RPSH V AGV+P A FDTVGWFA D L+ VG QV+F
Sbjct: 146 AAMRPSHGRVPLAGVLPFAPGFDTVGWFARDVNTLHAVG----------------QVLFG 189
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
C P+ + + ++ +L + + + +E
Sbjct: 190 GAC-----GPARVPLRPCIALDALALADADVQQALLAWSRQAGI----------DAPREA 234
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+ A A LQ + + G W+ +P +G I+ R +A+ Q+
Sbjct: 235 FAGAWQAWGDAYAALQGLDIREQLGPWIRQRRPRMGESIAPRFGQALALDPDTRPRWQAW 294
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ E AL LG ++P P F ARA +L S+AG + Q+
Sbjct: 295 RDEAARALVNRLGPDEAWLVPAAPCVALHRFAGSGERSNFYARALALGSLAGHAALPQIV 354
Query: 388 IPLGLHDNLPVAISLLAKHGSD 409
+P LPV +S +A G D
Sbjct: 355 LPFAAARGLPVGVSFIAAPGQD 376
>gi|296534565|ref|ZP_06896979.1| amidase [Roseomonas cervicalis ATCC 49957]
gi|296265105|gb|EFH11316.1| amidase [Roseomonas cervicalis ATCC 49957]
Length = 399
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 197/395 (49%), Gaps = 28/395 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL FA KD+FD+ GH TG GNPDW R+H A V +L GA GKT+ E+
Sbjct: 28 PLAGLRFAAKDLFDIAGHPTGAGNPDWPRSHPVPQRHAWMVQRLLDAGADLAGKTVTCEI 87
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
+ + G N+ GTP NP AP +PGGSSSGSA AV A V+ LGTDTGGSVRVPAS CG
Sbjct: 88 SLGLLGFNQFDGTPPNPAAPGCLPGGSSSGSASAVAAGEVEIGLGTDTGGSVRVPASLCG 147
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H + GV A SFDT GWF D RV +LL + + P+ ++
Sbjct: 148 IYGLRPTHGRLPFEGVCQQAVSFDTTGWFTRDAATFARVAAILLD--EPIPAPGPTPLLL 205
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
AED L+ Q + ++E L GG + V LG +
Sbjct: 206 AEDAFALAEAEVREALQAPLAALENLLGGP-AQRVSLGTPGE------------------ 246
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA-VRTSAQKIDVCQ 325
LA S +LQR E W+ P ++ + A T AQ++ V
Sbjct: 247 -----LAVWSGQRNILQRREGWRQFRPWIEAANPRFAFNVARNLAIASAFTEAQEV-VAA 300
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
SV+ +RA +ALL +L IP+ P P L + L+ R L S AG++G Q
Sbjct: 301 SVRERVRARAAALLEGGAVLCIPSTPFTAPPLGLPLPELDALTERISQLTSFAGMAGLPQ 360
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
+S+PLG P +S++ GSD L+ + L
Sbjct: 361 LSLPLGRAGGKPCGLSIIGARGSDARLVGIAAALE 395
>gi|326330930|ref|ZP_08197230.1| amidase [Nocardioidaceae bacterium Broad-1]
gi|325951288|gb|EGD43328.1| amidase [Nocardioidaceae bacterium Broad-1]
Length = 483
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 204/418 (48%), Gaps = 60/418 (14%)
Query: 14 KFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 71
+ V P S+H LSG T A+KD+F V G G G+P W +++ A AV A+L
Sbjct: 113 RVVGDPLVSSHTADGALSGETVAVKDLFAVAGFAVGAGSPAWLEQAPVSSTHAAAVAALL 172
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLG 131
GA+ G +E AYS++G N HYG P NP APDR+PGGSSSGSA AV LG
Sbjct: 173 DAGASVRGIARTEEFAYSLSGLNAHYGAPPNPKAPDRIPGGSSSGSATAVALGHASIGLG 232
Query: 132 TDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 191
+DTGGS+RVPA+Y G++G R SH AVS G++P+A++FDTVGW +L VG VLL
Sbjct: 233 SDTGGSIRVPAAYQGLYGIRTSHGAVSREGLLPLAKAFDTVGWMTRSAFLLQAVGDVLLP 292
Query: 192 LA--------DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
A D+++LV PS V AE+ + +
Sbjct: 293 EAVPSSPASVDEIHLV-PSLVALAEEDVATA----------------------------- 322
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
V + +P Q + E+ A + Q Y+ HG W+ T LG
Sbjct: 323 ---VSEALPEAQPLAWAPARLDEW--------RQAFAIGQAYQAWQAHGAWLETRLDTLG 371
Query: 304 PGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
+ R A + ++ D ++V ++ RA + ++GD +L P+ + P+A
Sbjct: 372 EAVRGRFEMARTVTRKQADEARAVLSQARAEILDVVGDR-VLAYPSAS------SVAPTA 424
Query: 364 LEV--FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
E R L IAG++G VSIP+ NLP + L+A G D LL L ++L
Sbjct: 425 AEAAGVRDDTLRLTCIAGIAGLPAVSIPVRTPTNLPAGLCLVAAPGRDRDLLALAQSL 482
>gi|389863205|ref|YP_006365445.1| amidase [Modestobacter marinus]
gi|388485408|emb|CCH86952.1| Amidase [Modestobacter marinus]
Length = 535
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 194/402 (48%), Gaps = 29/402 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+ V GH G GNP + A ++AP + A+L+ GA G DE+
Sbjct: 156 PLDGVGLAVKDLVGVAGHPIGAGNPVKLAESAPAAASAPVLAALLAAGAHVRGIARTDEL 215
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS++G N H G+P NP V GGS++G A AV D +GTDT GS+RVPASYCG
Sbjct: 216 AYSLSGTNVHSGSPANPWGAGLVVGGSTNGPASAVARGTADVGVGTDTAGSIRVPASYCG 275
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G RP+H AV GV+P+A SFDT+GW +L+RV VLL A V + ++
Sbjct: 276 LHGLRPTHGAVPLDGVLPLAPSFDTLGWLTRGAGLLHRVAGVLLPAAAPV-----TSLVL 330
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
AED L L+ P + G +P + L+ + +
Sbjct: 331 AEDLLALADPPVAAALAAAADELAAASG----------------LPLSRAALATSEERER 374
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ +A R +Q E HGDW+T LGPGI++R + + ++ ++
Sbjct: 375 W--------FTAFRAVQGAEAWAAHGDWITAHPGVLGPGIAQRFADGAAVTPDQLAAGRA 426
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
E RAAL+ L +++P P + DP+ +RA L +AGV G
Sbjct: 427 AVAEGRAALAGRLPAGVAVLMPAASSTAPPITADPARKAEYRAATLRLTCLAGVGGLPVA 486
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQ 428
P L D LPV +++L G+D L L+ TL Q
Sbjct: 487 VAPAALVDGLPVGLAVLGAGGTDTALTALLAGWDRTLSAARQ 528
>gi|402487109|ref|ZP_10833934.1| amidase [Rhizobium sp. CCGE 510]
gi|401813939|gb|EJT06276.1| amidase [Rhizobium sp. CCGE 510]
Length = 378
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 199/397 (50%), Gaps = 38/397 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLS L A+KD+FDV G+ T GNP T+TAP V +L GA +GKT DE+
Sbjct: 15 PLSSLRLAVKDLFDVAGYPTAAGNPAVLAASGIKTATAPLVQTLLDTGACFVGKTNTDEL 74
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N H+G P NP P +PGGSSSGSAVAV A L D LGTDT GS+R+PA+ G
Sbjct: 75 AYSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAING 134
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G+RP+H ++ + P+A SFD G+ + L + V+ + RPS ++
Sbjct: 135 LIGWRPTHGSLDNRALRPLAPSFDVPGFMT---RSLEPMAAVMSAVGMPAAHDRPSSILI 191
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
ED + ++++ +I ++ K+ S+ F
Sbjct: 192 PED---------------IFETIDGAIADEMIASLRSSAMPIRKIDSIASF--------- 227
Query: 267 YSIPSLAALSSA-MRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTSAQKIDVC 324
SLA L+ A + +LQR + +N + + PD + P I+ R+ R +++
Sbjct: 228 ----SLADLAVAFITILQREAWTSNKTLFERS--PDAIAPDIAARLRSGSRLDDEEVRAA 281
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
++ L A + LL ++ ++ +PT+ PP P + FR+ LL ++G+SG
Sbjct: 282 YRIRKLLSAEIDRLLCENVVVALPTLAMSPPTRDAQPESFAAFRSACIKLLCLSGLSGCP 341
Query: 385 QVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETLH 420
Q++ P N V++SLL +D L+N+ L
Sbjct: 342 QLAFPAASCAGN--VSLSLLGAQSTDRMLMNVAGRLR 376
>gi|359400155|ref|ZP_09193145.1| amidase [Novosphingobium pentaromativorans US6-1]
gi|357598478|gb|EHJ60206.1| amidase [Novosphingobium pentaromativorans US6-1]
Length = 400
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 197/399 (49%), Gaps = 33/399 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G IKD+F V G+ G GNP W T+ A AV L GA IG DE+A
Sbjct: 31 LAGSQTVIKDLFAVAGYGIGAGNPTWLEQAPVETANAWAVQQWLDAGADVIGIAHTDELA 90
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
S++G N HYGTP N AP R+PGGSSSGSA AV A LV +++ TDTGGS RVPASYCGI
Sbjct: 91 LSLSGTNVHYGTPLNTRAPGRIPGGSSSGSAAAVAAGLVPYAMATDTGGSTRVPASYCGI 150
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR-VGRVLLQLADDVNLVRPSQ--V 204
FG R +H V G++P+A FD VG A L R G +L A+ +P+ +
Sbjct: 151 FGIRTTHGRVPVDGLVPLAPRFDAVGVLASSGAWLARATGPLLPDFAE-----KPAARCL 205
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ A D L L+ + VK+V K H+ + +++ ++G +
Sbjct: 206 VVATDVLALADRNAADAVDDAVKAVAK----HL------------DIETVRTSFADG-RL 248
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
QE+ LA Q E HG+W+ KP GPGI R A + + ++
Sbjct: 249 QEWKDAFLA--------RQPVEVWKTHGEWIEGNKPKFGPGIGLRFEMASKADPARANLA 300
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
++ AA + G+L T G P+L++ + R R ++ IAG++G
Sbjct: 301 DMAAEQILAAFEKHVPPGGVLAFATASGAAPQLELPAPEKQSLRDRTIAMTCIAGLAGLP 360
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
VS+P+ + LP+ + LLA+ G D LL L L
Sbjct: 361 AVSLPVASVEGLPLGLCLLARRGEDETLLATAAALEGLL 399
>gi|306841125|ref|ZP_07473843.1| amidase [Brucella sp. BO2]
gi|306288846|gb|EFM60160.1| amidase [Brucella sp. BO2]
Length = 337
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 191/359 (53%), Gaps = 39/359 (10%)
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L+ GA IGK DE+A+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +
Sbjct: 4 LLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIA 63
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LG+DTGGS+R PAS+CG+ G R +H + G++P+A S DT+GWFA D + +VG VL
Sbjct: 64 LGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL 123
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L DD + +Q+++ + +E+L G + + K
Sbjct: 124 --LGDDAQEFKLTQLLY-------------------MPVLEQLLLGQAETDAYRAMFAKV 162
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
+ HF + Q P+L+ L A R +Q E NHG W+++ LGPGI+
Sbjct: 163 R----PHFTNLKAASQ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIA 214
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
+R +A + ++ + A++G+ +L +PTVPG P AL+ +
Sbjct: 215 DRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAY 274
Query: 368 RARAFSLLSIAGVSGFCQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
R +A LL ++G+SG Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 275 REQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 332
>gi|296130614|ref|YP_003637864.1| amidase [Cellulomonas flavigena DSM 20109]
gi|296022429|gb|ADG75665.1| Amidase [Cellulomonas flavigena DSM 20109]
Length = 579
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 181/371 (48%), Gaps = 36/371 (9%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+ AH PL+ T A+KD++ V G G GNP W + A AV +L+ GA G
Sbjct: 136 AGAHDGPLARRTVAVKDLYAVAGQRVGAGNPTWLADAPVESEHADAVARLLAAGADVRGV 195
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T DE+AYS+ G N H GTP NP AP RVPGGSSSGSA AV D LGTDTGGSVRV
Sbjct: 196 TRTDELAYSLAGTNAHSGTPPNPRAPGRVPGGSSSGSAAAVALGQADVGLGTDTGGSVRV 255
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PASY G++G R +H AVST G++P+A +FD VGW D +L VG VLL
Sbjct: 256 PASYQGLYGIRTTHGAVSTRGLVPLAPTFDAVGWLTRDADLLVAVGDVLL---------- 305
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVE-KLFGGHIIENVILGDYVKDKVPSLQHFLS 259
P + A +L RV+ L+ + + + G V D
Sbjct: 306 PPETDTAPRSPRL------RVSPALLAHAQGDVAARVAVFAADAGATVTDT--------- 350
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
+ LAA + R+ Q +E HG WV+ LGP ++ R A R
Sbjct: 351 -------WDGVDLAAWAEVFRVHQAWEAWREHGAWVSAHPGALGPDVAGRFAAASRIDDA 403
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
+ +LR + L+GD +LV+P P PP+ DP LE RA L +AG
Sbjct: 404 DGAAAAVRREQLRERVLDLVGDD-VLVLPAAPSVPPR--PDPVGLEAVRAATLRLTCVAG 460
Query: 380 VSGFCQVSIPL 390
+ G V +P+
Sbjct: 461 IGGLPAVVLPM 471
>gi|424876493|ref|ZP_18300152.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393164096|gb|EJC64149.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 391
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 212/419 (50%), Gaps = 64/419 (15%)
Query: 9 GAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
GAF+ + + ++A Q L+GLTFA+KD+ D+ TG GNPDW + A + AP V
Sbjct: 12 GAFVPGEIFRLDATA-QGSLAGLTFAVKDLIDIARRRTGGGNPDWRAAATPAAAHAPVVT 70
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
+L+ GAT +GKT+ DE+A+S+ G N HYG P NP PD +PGGSSSGSA AVGA++VDF
Sbjct: 71 RLLANGATCLGKTVTDELAFSLEGRNVHYGIPRNPRNPDWLPGGSSSGSAAAVGARVVDF 130
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
++GTDTGGSVRVPA++ GI+G RPSH AV GVI A S+DT+GWFA D + L RVG V
Sbjct: 131 AIGTDTGGSVRVPAAFSGIWGMRPSHDAVPLDGVILFAPSYDTIGWFARDAQTLARVGDV 190
Query: 189 LLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
LL A V DCL +S I+E+ + D +
Sbjct: 191 LLPPAPHV------------DCLTIS----------------------IVEDTL--DMLD 214
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSL-------AALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
P+ H + + + P A L A +Q YE + G + +KP
Sbjct: 215 ---PADAHAFRDAARRFANAAPMRVFEHWPSAQLQWAYSTIQGYEIARSLGSRLDALKPR 271
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
I ER A S + +V+ L L + ++P P L++D
Sbjct: 272 FAMDIGERFASASAISYADYETAAAVRRSFAGWLQERLPPGTVALLPVT--SVPHLRIDA 329
Query: 362 SALEV--FRARAFSLLSIAGVSGFCQV---SIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+ E+ F A +L ++AG +G Q+ S PL S++ GSD +LN
Sbjct: 330 LSEEIGRFYASTLALTALAGHAGTPQLQCGSSPL----------SVMGGCGSDRAILNF 378
>gi|424919918|ref|ZP_18343281.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392848933|gb|EJB01455.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 389
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 197/397 (49%), Gaps = 44/397 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGL A+KD+FDV G+ T GN T+TAP V +L GA +GKT DE+
Sbjct: 23 PLSGLRLAVKDLFDVAGYPTSAGNAAVLAASGIKTATAPLVQTLLEAGACFVGKTNTDEL 82
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N H+G P NP P +PGGSSSGSAVAV A L D LGTDT GS+R+PA+ G
Sbjct: 83 AYSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAING 142
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF--AWDP--KILNRVGRVLLQLADDVNLVRPS 202
+ G+RP+H ++ + P+A SFD G+ + DP +++ VG + A+D RP
Sbjct: 143 LVGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLDPMAAVMSAVG---MPAAND----RPL 195
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
++ AED + I G + + SL+
Sbjct: 196 SILIAEDIFE----------------------------TIDGAIADEMIASLRSSAMPIR 227
Query: 263 KEQEYSIPSLAALSSAM-RLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTSAQK 320
+ SL L+ A +LQ+ +++N + P+ + P I+ R+ A R ++
Sbjct: 228 RTAAICSFSLTDLALAFTTILQKEAWESNQ--TLFERGPEAIAPDIAARLRSASRLDNEE 285
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+ ++ A + LL ++ ++ +PT+ PP P + FR+ LL ++G+
Sbjct: 286 VRTAYRIRKLFSAKVDRLLRENVVVALPTLAMSPPTRDAGPESFAAFRSACVKLLCLSGL 345
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
SG Q++ P+ V++SLL +D L+N+
Sbjct: 346 SGCPQLAFPIASRVK-NVSLSLLGARSADRMLMNMAR 381
>gi|374364534|ref|ZP_09622636.1| amidase [Cupriavidus basilensis OR16]
gi|373103831|gb|EHP44850.1| amidase [Cupriavidus basilensis OR16]
Length = 345
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 183/358 (51%), Gaps = 27/358 (7%)
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
+TAP V +L GA +GKT DE+A+S+NG+N HYG P N AP R+ GGSSSGSA AV
Sbjct: 10 TTAPTVQRLLDNGAAFVGKTHTDELAFSMNGKNAHYGAPVNGAAPGRITGGSSSGSASAV 69
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
+L DF+LGTDTGGSVR PAS+CG+FG RP+ +S A + + SFDT G+FA D +
Sbjct: 70 SNQLCDFALGTDTGGSVRAPASHCGLFGIRPTVGRISLAQTLALCDSFDTCGFFARDIRT 129
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
RV VLL D L +++ AED ++ + P+ +V +E FG
Sbjct: 130 FARVADVLLG-GDPRPLPASPRLLLAEDLFRMPTAPALDALLPVVGGIEAAFGKATPVT- 187
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
V D+ L + A R +Q +E G +
Sbjct: 188 -----VADR--------------------PLEDIWWAFRYVQGWEAWQTDGAMIEQYGLQ 222
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
LGP ++ R + + + + +V+ + A L+ALLG+ +L++PT+P P
Sbjct: 223 LGPDVAARFAFSKGVTEAQFEASSAVRRDFTAHLAALLGNDAVLILPTMPDIAPLSDAAG 282
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
LE +R + L +A +SGF +S+PL P+ ISL+ GSD L+ E L
Sbjct: 283 EELETYRNLSAQTLCLAPLSGFPHLSLPLASRAGAPLGISLMGPAGSDRSLIAFAEKL 340
>gi|302832303|ref|XP_002947716.1| hypothetical protein VOLCADRAFT_116484 [Volvox carteri f.
nagariensis]
gi|300267064|gb|EFJ51249.1| hypothetical protein VOLCADRAFT_116484 [Volvox carteri f.
nagariensis]
Length = 308
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 159/316 (50%), Gaps = 27/316 (8%)
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
S VAV VD LGTDTGGS+RVPAS+CG+ G RP+ V+ G +A SF T GWFA
Sbjct: 16 SHVAVACGDVDIGLGTDTGGSIRVPASFCGLLGIRPTWGRVARCGTTALAPSFTTPGWFA 75
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
DP +L VG VLL + + R + + A+D L+ P+ +
Sbjct: 76 RDPAVLRAVGAVLLDPSSRGS-SRLGRWLVAKDAFALADPPTGKAIY------------- 121
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP----SLAALSSAMRLLQRYEFKNNHG 292
D + + P + L + E E + P L M + + +E H
Sbjct: 122 --------DTLSAQFPKVVQLLGQ-PLEVEVAAPLSGEGLGTFVDWMGVFRGFEVWQEHA 172
Query: 293 DWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
WV+ P+ GPGI ER A + ++ +V + + +R+ L LLG G+LV+PT PG
Sbjct: 173 AWVSAHNPEFGPGIKERFAMAAAVTKEQHEVGSAKRRRIRSHLLELLGSDGLLVVPTTPG 232
Query: 353 PPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFL 412
P P + P+ L+ +R R SL SIAG++G QVS+P+ D LPV + L+ GSD L
Sbjct: 233 PAPPVNTPPADLDAWRTRLISLTSIAGLAGLPQVSLPIARVDGLPVGLGLIGPPGSDEAL 292
Query: 413 LNLVETLHNTLKEELQ 428
L + E L + + LQ
Sbjct: 293 LEITEHLMGVIAQPLQ 308
>gi|407972843|ref|ZP_11153756.1| putative amidase family protein [Nitratireductor indicus C115]
gi|407431614|gb|EKF44285.1| putative amidase family protein [Nitratireductor indicus C115]
Length = 399
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 210/428 (49%), Gaps = 40/428 (9%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
M R D G +E+ L P PL L F +KD D+ GH T +G+P W H A
Sbjct: 1 MLDRAIDLG-LVEQLDLAPLRHG---PLDKLRFTVKDNIDIAGHKTSYGSPAWRNAHPAP 56
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
A V +L+ GA +GK + DE YS++GE+ H+GTP N APDR+PGGSSSGSA +
Sbjct: 57 VHNALCVDQLLAAGARCVGKAVADEFTYSLDGESFHFGTPRNAKAPDRIPGGSSSGSAAS 116
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK 180
V + DFSL TD GGS+RVPAS CG++G RPS +S AGV+P S TVG A
Sbjct: 117 VANGIADFSLCTDAGGSIRVPASLCGLWGMRPSTHRISEAGVLPFQPSVSTVGVLAERLD 176
Query: 181 ILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLF--GGHII 238
+L+ RV+L ++I ED + SI S V ++E++ G +
Sbjct: 177 VLDAAMRVMLNGPAAPPPSP-GRIIILEDAM---SIASPAVQDQAASALERIASRAGLAL 232
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
E V + + ++ E S +L + +R LQ EF++ G+W+
Sbjct: 233 ERVRFSEII--------------GEQSELSACNL----NGLRDLQTAEFQSTVGNWIEAC 274
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSV-----KTELRAALSALLGDHGILVIPTVPG- 352
KP+LG + + Q+ D ++ + L ++A ++ PT P
Sbjct: 275 KPELG-----FTFSMAYGNVQRFDRIAALDRLANRERLFRQINAFFTPDTVISFPTTPTI 329
Query: 353 PPPKLQMDP-SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGF 411
P K ++ A+ F A ++ + +G + ++S PL ++ PV +S +A + D F
Sbjct: 330 APRKGSLNTLEAVMAFYDPAMTITAFSGAARLPEISAPLLSVEHCPVGLSFVAGNYQDEF 389
Query: 412 LLNLVETL 419
LLN V +
Sbjct: 390 LLNAVREM 397
>gi|88809608|ref|ZP_01125115.1| amidase family protein [Synechococcus sp. WH 7805]
gi|88786358|gb|EAR17518.1| amidase family protein [Synechococcus sp. WH 7805]
Length = 400
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 205/407 (50%), Gaps = 39/407 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G TFA KD+FD+ G G GNP W + S + S A AV +L GA G T MDE
Sbjct: 20 PLQGHTFAAKDLFDLKGERRGCGNPHWRKRQSPSLSNATAVQQLLDAGAICTGSTTMDEF 79
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ ++GE+ G+P N P + GGSSSGSA AV VD +LGTDTGGS+RVPAS+CG
Sbjct: 80 AFGLSGESPWTGSPPNSANPGCITGGSSSGSAAAVARGDVDLALGTDTGGSIRVPASWCG 139
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL---QLADDVNLVRPSQ 203
+ G+RPSH AVS G+ P+A S DT G F+ DP++L VLL + P++
Sbjct: 140 LLGWRPSHGAVSVQGLQPLAPSLDTTGLFSRDPQVLLAAAEVLLSSNKQRQSAEAPAPTR 199
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGG-HI-IENVILGDYVKDKVPSLQHFLSEG 261
+ + + P V L+KS E+L H IE + L + LQ+
Sbjct: 200 LYWIPELWTDLEHP---VRSALIKSSEQLSQTIHCEIEALPLATFGLKNPQQLQNLFQ-- 254
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ-- 319
+ + + AAL + + LGP + ER VR ++
Sbjct: 255 TIQWDEIAATFAALPNDL---------------------PLGP-VLERNLAMVRNRSKGA 292
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFRARAFSLLS 376
+ V Q + ++R L+ +LGDHG+L P P P + +D A + + L +
Sbjct: 293 QEQVIQH-RQQVRDTLATVLGDHGLLAQPITPCTAPAIGSFSLDRGAGSLV-GQLILLNA 350
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+AG+SG ++SIP G DN P+ + L+A G D LL +E +L
Sbjct: 351 LAGLSGAPELSIPTGGMDNKPLGLGLIASPGRDRLLLQTLEMCARSL 397
>gi|283457056|ref|YP_003361620.1| aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A
[Bifidobacterium dentium Bd1]
gi|283103690|gb|ADB10796.1| GatA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Bifidobacterium dentium Bd1]
Length = 543
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 202/404 (50%), Gaps = 16/404 (3%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+ S+ LPL GL+ A+KD++ V+G+ G G+ + + V +L GA +G
Sbjct: 147 TESSTDLPLRGLSVAVKDLYGVEGYAIGAGSEAFLAEGIPQQHNSWPVQRLLDAGADVLG 206
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
+ DE AYS+ G N HYGTP NP AP R+ GGSSSGSA A VD LG+DTGGSVR
Sbjct: 207 ISRTDEFAYSLAGTNAHYGTPPNPQAPGRISGGSSSGSASATALGQVDIGLGSDTGGSVR 266
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
VP+SY ++G R + +V GV+P++QSFDTVGW P +L +V +VL+ V
Sbjct: 267 VPSSYQHLWGIRTTCGSVPMEGVLPLSQSFDTVGWMTRTPDLLEKVAKVLITQESGVESA 326
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQHFL 258
+VI++E+ + ++I V+ GL + +L +V L D + F
Sbjct: 327 LSGKVIWSEELMSSTNID---VSAGLHAWISRLEESARNATDVSLEQIRLDGILG-PRFE 382
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
EG L+ S+ +++Q YE NHG W+ LG I R A +A
Sbjct: 383 GEGPDR-------LSDWLSSYKIVQGYEAWRNHGTWLARHWNTLGADIESRFRTASELTA 435
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---MDPSALEVFRARAFSLL 375
+ + + + ++LG +L++P+ PK+ + +++E R L
Sbjct: 436 ENYRNAREHMDFWKTNVRSILG-QSVLLVPSTSSVAPKITDSAIGGTSIEDERTATMRLT 494
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
IAG++G V+IP+ D LP I + GSD L+ L
Sbjct: 495 CIAGLTGLPAVNIPIRTEDGLPCGICAVGPAGSDTELIAFARRL 538
>gi|309800743|ref|ZP_07694878.1| Amidase [Bifidobacterium dentium JCVIHMP022]
gi|308222588|gb|EFO78865.1| Amidase [Bifidobacterium dentium JCVIHMP022]
Length = 543
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 202/404 (50%), Gaps = 16/404 (3%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+ S+ LPL GL+ A+KD++ V+G+ G G+ + + V +L GA +G
Sbjct: 147 TESSTDLPLQGLSVAVKDLYGVEGYAIGAGSEAFLAEGIPQQHNSWPVQRLLDAGADVLG 206
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
+ DE AYS+ G N HYGTP NP AP R+ GGSSSGSA A VD LG+DTGGSVR
Sbjct: 207 ISRTDEFAYSLAGTNAHYGTPPNPQAPGRISGGSSSGSASATALGQVDIGLGSDTGGSVR 266
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
VP+SY ++G R + +V GV+P++QSFDTVGW P +L +V +VL+ V
Sbjct: 267 VPSSYQHLWGIRTTCGSVPMEGVLPLSQSFDTVGWMTRTPDLLEKVAKVLITQESGVESA 326
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQHFL 258
+VI++E+ + ++I V+ GL + +L +V L D + F
Sbjct: 327 LSGKVIWSEELMSSTNID---VSAGLHAWISRLEESARNATDVSLEQIRLDGILG-PRFE 382
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
EG L+ S+ +++Q YE NHG W+ LG I R A +A
Sbjct: 383 GEGPDR-------LSDWLSSYKIVQGYEAWRNHGTWLARHWNTLGADIESRFRTASELTA 435
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---MDPSALEVFRARAFSLL 375
+ + + + ++LG +L++P+ PK+ + +++E R L
Sbjct: 436 ENYRNAREHMDFWKTNVRSILG-QSVLLVPSASSVAPKITDSAIGGTSIEDERTATMRLT 494
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
IAG++G V+IP+ D LP I + GSD L+ L
Sbjct: 495 CIAGLTGLPAVNIPIRTEDGLPCGICAVGPAGSDTELIAFARRL 538
>gi|406904039|gb|EKD45935.1| Amidase family protein [uncultured bacterium]
Length = 517
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 211/423 (49%), Gaps = 40/423 (9%)
Query: 9 GAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
G F E F ++PS+ Q L+ LTFA+KD D+ G+ +G G+P W +HS A A V
Sbjct: 79 GIFTESFKIEPSA---QGKLNNLTFAVKDSIDICGYKSGCGSPLWLESHSKAVVNAVCVD 135
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
+L GA GKT+M E+ + G N+ + NP +PGGSSSGSA AV A +VDF
Sbjct: 136 QLLYSGAACCGKTVMGELGCGLTGINRFFKLVPNPKFSTHIPGGSSSGSAAAVAAGIVDF 195
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
SLGTD GGS+RVPASYCG+FG RPS +S AGV ++ SF+TVG FA D ++++V V
Sbjct: 196 SLGTDAGGSIRVPASYCGVFGMRPSCEIMSLAGVSCLSPSFETVGIFANDIDVIDKVLSV 255
Query: 189 LLQLADDVNLVRPSQ-------VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
L+ +N + S+ + +DC L L ++ F G+I +
Sbjct: 256 LVP----INFTKGSKKEDDVGTIYVLKDCFDL-----------LEDDLKNGFYGYI--EI 298
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
+ +Y+ D V + + + E ++ + + YE N+ WV + + +
Sbjct: 299 LKNNYIGDVVEITSNMIDAEVYDSE------QGWANTFKTIFCYEAWNSLSPWVESARLE 352
Query: 302 LGPGISERVWEAVRT--SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
G + + A+R + K+DV + +++ L + + IPT P P+
Sbjct: 353 FGKN-TYVDFSALRNHVARSKLDVAIKQREIQFHKINSFLYPNNLFCIPTTPSIAPRRNG 411
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
D ++ L SI+ V Q+S+PL D P+ +S + H SD LL V+ L
Sbjct: 412 D---VKTEYPNFTRLHSISNVGRLPQISVPL-FGDKTPIGLSFIGAHRSDFNLLATVKKL 467
Query: 420 HNT 422
T
Sbjct: 468 KET 470
>gi|111223659|ref|YP_714453.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Frankia alni ACN14a]
gi|111151191|emb|CAJ62902.1| putative glutamyl-tRNA(Gln) amidotransferase, subunit A [Frankia
alni ACN14a]
Length = 378
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 176/388 (45%), Gaps = 36/388 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL A+KD+F V G+ G GNP W A AV A+ + GA G DE+
Sbjct: 17 PLDGLRVAVKDLFAVGGYRIGAGNPRWLAEAPVEPVDAQAVRALRAAGAAIAGIAQTDEL 76
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S++G N HYGTP NP APDRVPGGS+SG A AV A D LGTDT GS+RVPAS CG
Sbjct: 77 AFSLSGANVHYGTPPNPAAPDRVPGGSTSGPASAVAAGQADVGLGTDTAGSIRVPASVCG 136
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+H V GV+ +A SFD VGW DP +L VG VLL + +F
Sbjct: 137 LYGLRPTHGTVGAGGVLGLAPSFDAVGWLTADPGLLRAVGNVLLPPPAGAPRP--AARLF 194
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
L +++ + +T L V G + E LGD
Sbjct: 195 VAGPLPAAAVGT--LTDALGADVRT---GGVHE---LGD--------------------- 225
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
IP L A A R++Q E HG W+T LG + ER A V +
Sbjct: 226 --IPGLVA---AFRVVQAAEAWRLHGAWITAHPRALGADVEERFRFGAGVDAGAERVARR 280
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
RA L LG LV+P GP + +R +A G
Sbjct: 281 QIAAGRARLLDRLGADTWLVLPAAGGPGHLRGSGARDRDAWRQATLGCTVVASAYGLPSC 340
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLN 414
+P PV ++L+ G+D LL+
Sbjct: 341 VLPTPRTQGGPVGLALVGPPGADRGLLD 368
>gi|241666569|ref|YP_002984653.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862026|gb|ACS59691.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 378
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 203/397 (51%), Gaps = 40/397 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGL A+KD+FDV G+ T GN TSTAP V +L GA +GKT DE+
Sbjct: 15 PLSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTSTAPLVQTLLDAGACFVGKTNTDEL 74
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N H+G P NP P VPGGSSSGSAVAV A L D LGTDT GS+R+PA+ G
Sbjct: 75 AYSLIGGNIHFGMPINPRDPHLVPGGSSSGSAVAVAAGLADIGLGTDTSGSIRLPAAVNG 134
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF--AWDP--KILNRVGRVLLQLADDVNLVRPS 202
+ G+RP+H ++ + P+A SFD G+ + +P +++ VG + A+D +PS
Sbjct: 135 LIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSAVG---MPAAND----QPS 187
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
++ +D I++ + D + ++ S + N
Sbjct: 188 SILIPKDIFA------------------------TIDDAV-ADEMIARLRSAGMPIRMTN 222
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+S+ LA + + +LQR +++N + + + + P I+ R+ +++
Sbjct: 223 AIASFSLADLAL--TFITILQREAWESNRTLFERSPEA-IAPNIAARLLSGSHLVDEEVR 279
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
++ A + LL ++ ++ +PT+ PP+ +P + FR+ LL ++G+SG
Sbjct: 280 EAGRIRKLFSAEIDRLLRENVVVALPTLATSPPRRDAEPESFAAFRSACIKLLCLSGLSG 339
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
Q++ P+ ++ ++SL G+D L++L L
Sbjct: 340 CPQLAFPI-VNCAGSGSLSLFGARGADRMLIDLARRL 375
>gi|269795028|ref|YP_003314483.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Sanguibacter
keddieii DSM 10542]
gi|269097213|gb|ACZ21649.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sanguibacter keddieii DSM 10542]
Length = 535
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 197/395 (49%), Gaps = 27/395 (6%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
S A LPL+G+ A+KD+F V G TG GNP W T A A+ + L+ GA G
Sbjct: 162 SVARGLPLAGVGIAVKDLFAVAGQRTGAGNPAWLAQAEVETVDAAALTSFLTAGAHVEGV 221
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
DE+A+S+ G N H+GTP N AP R+ GGS+SG A AV A L D +LGTDT GSVRV
Sbjct: 222 AHTDELAFSLAGTNVHHGTPPNAAAPGRITGGSTSGPAAAVAAGLADLALGTDTAGSVRV 281
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PASYCG++G R +H AVS AG++ +A SFDTVG +L R G +L A V +
Sbjct: 282 PASYCGLYGLRTTHDAVSRAGLVGLAPSFDTVG-------VLTRGGPLL---ASAVETLL 331
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P Q + D +L +P+ L++ E + ++ V+ +P
Sbjct: 332 PEQDVTTVD--RLVVVPA------LLELAEPDVRLAVEAALLALS-VRTGIPV------- 375
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
E +L + +A R LQ+ E HG +V P + ER +
Sbjct: 376 -ETAGEVGPGALESWFAAFRTLQQAEAWETHGAFVQAHPGAFEPAVEERFLAGSAVTETD 434
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+ Q+ T+ R L+ LL +L +P+ P+ P+ +++ RA L +A +
Sbjct: 435 VARAQATITQARTTLARLLPHGTVLALPSTSSVAPRTDAGPAEIDLTRAATLRLTCLASL 494
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
G +S+P +LPV + L+A G D L++L
Sbjct: 495 GGLPALSVPTPRVGSLPVGLCLVAAPGQDRTLVDL 529
>gi|424877918|ref|ZP_18301558.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392520410|gb|EIW45139.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 378
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 203/397 (51%), Gaps = 40/397 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGL A+KD+FDV G+ T GN TSTAP V +L GA +GKT DE+
Sbjct: 15 PLSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTSTAPLVQTLLDAGACFVGKTNTDEL 74
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N H+G P NP P VPGGSSSGSAVAV A L D LGTDT GS+R+PA+ G
Sbjct: 75 AYSLIGGNIHFGMPINPRDPHLVPGGSSSGSAVAVAAGLADIGLGTDTSGSIRLPAAVNG 134
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF--AWDP--KILNRVGRVLLQLADDVNLVRPS 202
+ G+RP+H ++ + P+A SFD G+ + +P +++ VG + A+D +PS
Sbjct: 135 LIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSAVG---MPAAND----QPS 187
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
++ +D I++ + D + ++ S + N
Sbjct: 188 SILIPKDIFA------------------------TIDDAV-ADEMIARLRSAGMPIRMTN 222
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+S+ LA + + +LQR +++N + + + + P I+ R+ +++
Sbjct: 223 AIASFSLADLAL--TFITILQREAWESNRTLFERSPEA-IAPDIAARLLSGSHLVDEEVR 279
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
++ A + LL ++ ++ +PT+ PP+ +P + FR+ LL ++G+SG
Sbjct: 280 EAGRIRKLFSAEIDRLLRENVVVALPTLATSPPRRDAEPESFAAFRSACIKLLCLSGLSG 339
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
Q++ P+ ++ ++SL G+D L++L L
Sbjct: 340 CPQLAFPI-VNCAGSGSLSLFGARGADRMLIDLARRL 375
>gi|406989082|gb|EKE08899.1| hypothetical protein ACD_16C00238G0004 [uncultured bacterium]
Length = 399
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 198/400 (49%), Gaps = 37/400 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G FA+KD+FDV G T GNPD+ + + TA AV + GA +GKT DE+
Sbjct: 27 LKGYRFAVKDVFDVKGFRTQAGNPDYFAQIAPSVKTAQAVTILQEAGAILVGKTHTDELG 86
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
S+ G N+HYG P N +P+ VPGGSSSGSA AV A L+DF+LG DT GSVR PAS+CGI
Sbjct: 87 GSLFGLNEHYGPPINSYSPNCVPGGSSSGSAAAVAANLIDFALGADTSGSVRAPASFCGI 146
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+ + T GV+P++ DTVG FA P I+ +V DV ++ +
Sbjct: 147 YGLRPTFDRIPTTGVLPISPHLDTVGVFARHPDIIAQVL--------DVYGIKEQR---- 194
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK---E 264
+ S + R+ LV S+E+ L ++K+ Q S + +
Sbjct: 195 ----EFSRL---RIIPYLVNSLEE----------TLKQSFQEKLTEFQGLTSSSSPFILD 237
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+E +L S+ +R + Y N H DW+ P G ISER+ A S ++
Sbjct: 238 EE----TLTQWSTVIRTIAMYGLWNVHKDWILKTTPTFGKLISERLKLASSISTEEYKRA 293
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ E++ + L ++V PTV P L S L+ F + +A +SGF
Sbjct: 294 LLQQKEIQTFMDDGLEPEDVVVFPTVHDIAPLLSSSLSHLKDFALKTSRHTCVAALSGFP 353
Query: 385 QVSIPL-GLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
++++PL ++ +S L K G D L H+ L
Sbjct: 354 EITLPLRNVNIRGCFGMSFLGKAGEDVSLTTFASKAHSIL 393
>gi|209546084|ref|YP_002277974.1| amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209538941|gb|ACI58874.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 386
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 191/394 (48%), Gaps = 36/394 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL A+KD+FDV G+ T GN +TAP V +L GA +GKT DE+A
Sbjct: 24 LFGLRLAVKDLFDVAGYPTAAGNAAVLVASGIKRATAPLVQTLLEAGACFVGKTNTDELA 83
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N H+G P NP P +PGGSSSGSAVAV A L D LGTDT GS+R+PA+ G+
Sbjct: 84 YSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAINGL 143
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G+RP+H ++ + P+A SFD G+ + L + V+ + RP ++
Sbjct: 144 IGWRPTHGSLDNRALRPLAPSFDVPGFMT---RSLESMAAVMSAVGMPAANDRPISILIP 200
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
ED + ++++ +I ++ ++ + F
Sbjct: 201 ED---------------IFETIDGTIADEMIASIRSAAMPIRRIDFISSF---------- 235
Query: 268 SIPSLAALSSAM-RLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTSAQKIDVCQ 325
SLA L+ A +LQ+ +++N + + PD + P I+ R+ R ++ +
Sbjct: 236 ---SLADLAVAFTTILQKEAWESNKTLFERS--PDAIAPDIAARLRAGSRLDDGEMREAR 290
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
++T + LL ++ ++ +PT+ PP P + FR+ LL +AG+SG Q
Sbjct: 291 RIRTLFSGEIERLLCENMVIALPTLAMNPPTRDAGPESFAAFRSACIKLLCLAGLSGCPQ 350
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
++ P+ ++SL +D L+N+ +
Sbjct: 351 LAFPIASRVG-NASLSLFGARSTDSLLMNVARRI 383
>gi|265996686|ref|ZP_06109243.1| amidase [Brucella ceti M490/95/1]
gi|262550983|gb|EEZ07144.1| amidase [Brucella ceti M490/95/1]
Length = 318
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 180/343 (52%), Gaps = 39/343 (11%)
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
MA+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS+R PAS+C
Sbjct: 1 MAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFC 60
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD + +Q++
Sbjct: 61 GLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQEFKLTQLL 118
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
+ + +E+L G + + K + HF + Q
Sbjct: 119 Y-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHFATLKAASQ 155
Query: 266 EYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
P+L+ L A R +Q E NHG W+++ LGPGI++R +A +
Sbjct: 156 ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKN 211
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
++ + A++G+ +L +PTVPG P AL+ +R +A LL ++G+SG
Sbjct: 212 QRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGL 271
Query: 384 CQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
Q+++PLG +HD IS + GSD L+ L +T+
Sbjct: 272 PQITLPLGSLRPGGTMHDA-SFGISFIGPRGSDRTLIALAQTI 313
>gi|261753105|ref|ZP_05996814.1| amidase [Brucella suis bv. 3 str. 686]
gi|261742858|gb|EEY30784.1| amidase [Brucella suis bv. 3 str. 686]
Length = 318
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 180/343 (52%), Gaps = 39/343 (11%)
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
MA+S+ G+N HY P NP APDRV GGSSSGSA AV KL D +LG+DTGGS+R PAS+C
Sbjct: 1 MAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFC 60
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ G R +H + G++P+A S DT+GWFA D + +VG VL L DD + +Q++
Sbjct: 61 GLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL--LGDDAQEFKLTQLL 118
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
+ + +E+L G + + K + HF + Q
Sbjct: 119 Y-------------------MPVLEQLLLGQAETDAYRAMFAKVR----PHFATLKAASQ 155
Query: 266 EYSIPSLA--ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
P+L+ L A R +Q E NHG W+++ LG GI++R +A +
Sbjct: 156 ----PTLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGLGIADRFAYGAEMTADMVKN 211
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
++ + A++G+ +L +PTVPG P AL+ +R +A LL ++G+SG
Sbjct: 212 QRARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGL 271
Query: 384 CQVSIPLG-------LHDNLPVAISLLAKHGSDGFLLNLVETL 419
Q+++PLG +HD P IS + GSD L+ L +T+
Sbjct: 272 PQITLPLGSLRPGGTMHDA-PFGISFIGPRGSDRTLIALAQTI 313
>gi|148909975|gb|ABR18072.1| unknown [Picea sitchensis]
Length = 274
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 100/139 (71%)
Query: 290 NHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
NH +W+ +VKPDLGPGIS RV A+ T+ + I C K E R AL+ALL D IL IPT
Sbjct: 2 NHEEWINSVKPDLGPGISARVRAALETNNENIGHCLKAKDEAREALNALLKDDAILFIPT 61
Query: 350 VPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
PGP PKL M + L+ F RAF+LLSIAG+SG CQVSIP+G HD P+A+SL+A+HG D
Sbjct: 62 TPGPAPKLNMKQNLLDDFHIRAFTLLSIAGMSGCCQVSIPVGQHDKCPLAVSLMARHGGD 121
Query: 410 GFLLNLVETLHNTLKEELQ 428
FLL+ V ++ TL+EE++
Sbjct: 122 RFLLDTVRAMYPTLQEEVK 140
>gi|328875581|gb|EGG23945.1| hypothetical protein DFA_06083 [Dictyostelium fasciculatum]
Length = 396
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 208/425 (48%), Gaps = 51/425 (12%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVT-----GFGNPDWARTHSAATSTA 64
+F++KF+++ S + L F +KD DV G+ + F + D A+ H A
Sbjct: 9 SFIDKFIIE-SKQSQSDDQKILEFGVKDTIDVKGYQSKACCRAFESVDVAKEH------A 61
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V +L+ G +GKT M EMAY + G N++ GTP N P VPGGSSSGSA AV
Sbjct: 62 EIVERLLNAGCRVVGKTNMHEMAYGLTGINEYTGTPDNLKYPGIVPGGSSSGSATAVAHS 121
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWD-PKILN 183
+ DF+LGTDTGGSVR+PA+ G+FG +P+H AVS GV P S D VG+FA D I+N
Sbjct: 122 MCDFALGTDTGGSVRIPAACTGVFGLKPTHGAVSRIGVHPPHSSLDCVGFFARDIDTIIN 181
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
+ R+ Q D L+ ++ +P V GL E I+N+I
Sbjct: 182 VLERLNPQDLDAKQLL-------------ITKLPKFGVLTGLANVQED------IDNLI- 221
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ------RYEFKNNHGDWVTT 297
K K+ SL + N E +P ++ ++ Q +E + + + +
Sbjct: 222 ----KSKLTSLVA-AKQANGEGGEIVPITLQDNTHDQVFQAGVNIIAFENYSAYANILDR 276
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
V PD ++ R+ ++ + + +T+ + LL I+ +PT+P PP +
Sbjct: 277 VSPD----VASRLGHGKNVTSNILADSEKTRTQFTEQIDQLLQSTPIIALPTLPVLPPTV 332
Query: 358 -QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
++ + +V + L+ V+G +SIP G N PVA+ L+ G++ +L +V
Sbjct: 333 EEVSNGSFQVMQLS--RLVRPFNVTGHPAISIPFGEISNRPVALQLITSKGNELYLCKVV 390
Query: 417 ETLHN 421
+ L N
Sbjct: 391 QLLLN 395
>gi|222834269|gb|EEE72746.1| amidase family protein [Populus trichocarpa]
Length = 175
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 115/172 (66%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P +A PL GLTFA+KD+FDV G+ TG GNP T+TAP V +L GA +
Sbjct: 4 PVPNAANGPLRGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLLDAGAAFV 63
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GK DE+A+S+NG+N HYG P N APDR+ GGSSSGSA AV KL DF+LGTDTGGSV
Sbjct: 64 GKVHTDELAFSMNGQNHHYGGPYNGAAPDRITGGSSSGSASAVSNKLCDFALGTDTGGSV 123
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
R PAS+CG+FG RPSH +S +P+ ++ DT G+FA D RV VLL
Sbjct: 124 RAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLL 175
>gi|325676656|ref|ZP_08156332.1| amidase [Rhodococcus equi ATCC 33707]
gi|325552546|gb|EGD22232.1| amidase [Rhodococcus equi ATCC 33707]
Length = 446
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 189/399 (47%), Gaps = 45/399 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P SGL A+ D+F ++G G GNP W T+TA +V +L+GGAT G
Sbjct: 74 PTSGLRVAVTDLFAIEGQRIGAGNPAWLGQAGTETATADSVARLLAGGATVAGIAQTVGF 133
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
+ +G N YGTP N A RVPGG++SG++ AV + LG DT GS+R+PA+Y G
Sbjct: 134 GFGHSGINTSYGTPPNAAASGRVPGGATSGASTAVARRTATVGLGPDTTGSIRIPAAYQG 193
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL----QLADDVNLVRPS 202
++GF P+H AVSTAG +P++++FD VGW D L VG LL ++ D + P
Sbjct: 194 LYGFGPTHGAVSTAGAMPLSRTFDNVGWVCADAPTLATVGDALLPSAPEIEFDAAVTWPG 253
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+ A+ +Q P+ R L + + +P L
Sbjct: 254 LLAVADADVQ----PAVRAA--------------------LAQWKRSGLPPL-------- 281
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E++ I +L A+ +Q YE +G WV+T + A + SA D
Sbjct: 282 TEEDLDIAALPDWYDAVVAVQGYEAWQQYGGWVSTATGSVTDEARVNFLAASKVSASTYD 341
Query: 323 VCQSVKTELRAALSA--LLGDHGILVIPTVPGPPPKLQMDPSALEV---FRARAFSLLSI 377
+S+ RAA + LG +L++PT P DP ++ + R L+++
Sbjct: 342 --RSLADVRRAAQTVRDFLGSR-VLLLPTTGSAAPSSSDDPGSVHLAATLRTTGL-LITV 397
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
A V+G ++P+ LPV +S++ G D +L LV
Sbjct: 398 ATVAGLPVATVPVRSEGGLPVGLSVIGPAGRDRDVLALV 436
>gi|312138921|ref|YP_004006257.1| amidase [Rhodococcus equi 103S]
gi|311888260|emb|CBH47572.1| putative secreted amidase [Rhodococcus equi 103S]
Length = 446
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 189/399 (47%), Gaps = 45/399 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P SGL A+ D+F ++G G GNP W + T+TA +V +L+GGAT G
Sbjct: 74 PTSGLRVAVTDLFAIEGQRIGAGNPAWLGQAATETATADSVARLLAGGATVAGIAQTVGF 133
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
+ +G N YGTP N A RVPGG++SG++ AV + LG DT GS+R+PA+Y G
Sbjct: 134 GFGHSGINTSYGTPPNAAASGRVPGGATSGASTAVARRTATVGLGPDTTGSIRIPAAYQG 193
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL----QLADDVNLVRPS 202
++GF P+H AVSTAG +P++++FD VGW D L VG LL ++ D + P
Sbjct: 194 LYGFGPTHGAVSTAGAMPLSRTFDNVGWVCADAPTLATVGDALLPSAPEIEFDAAVTWPG 253
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+ A+ +Q P+ R L + + +P L
Sbjct: 254 LLAVADADVQ----PAVRAA--------------------LAQWKRSGLPPL-------- 281
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E++ I +L A+ +Q YE +G WV+T + A + SA D
Sbjct: 282 AEEDLDIAALPDWYDAVVAVQGYEAWQQYGGWVSTATGSVTDEARVNFLAASKVSASTYD 341
Query: 323 VCQSVKTELRAALSA--LLGDHGILVIPTVPGPPPKLQMDPSALEV---FRARAFSLLSI 377
+S+ RAA + LG +L++PT P DP ++ + R L+++
Sbjct: 342 --RSLADVRRAAQTVRDFLGSR-VLLLPTTGSAAPASSDDPGSVHLAATLRTTGL-LITV 397
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
A V+G ++P+ PV +S++ G D +L LV
Sbjct: 398 ATVAGLPVATVPVRSEGGRPVGLSVIGPAGRDRDVLALV 436
>gi|404215136|ref|YP_006669331.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Gordonia sp. KTR9]
gi|403645935|gb|AFR49175.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Gordonia sp. KTR9]
Length = 404
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 189/392 (48%), Gaps = 37/392 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G + A+KD++ + GH G GN W R + +TA +V A+L+ GA+ G + DE A
Sbjct: 43 LQGKSVAVKDLYTIKGHRVGAGNEQWLRESQPSRTTARSVAALLAAGASVAGISRTDEFA 102
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N HYGTP NP A +R+PGGSSSGSA AV LGTDTGGS+R+P+SY G+
Sbjct: 103 YSLAGTNGHYGTPPNPKASNRIPGGSSSGSASAVALGQATIGLGTDTGGSIRIPSSYQGL 162
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ-LADDVNLVRPSQVIF 206
+G R +H AVS G++P+A SFDTVGW L VL+ L V+ + +
Sbjct: 163 YGIRTTHGAVSRDGLLPLAPSFDTVGWMTRSRADLVATTSVLMPGLPSRVDF----PITY 218
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
++D + L+S P V++ K G + I
Sbjct: 219 SDDIIDLAS-PD---VAAAVRAGIKRLGSQMPLRAI-----------------------R 251
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ L A + Q +E HG+WV+ L P + R A + +A +
Sbjct: 252 FDTAVLPLWVKAFQTRQGWEAWRAHGEWVSRHWDSLNPDVRSRFETASKVTASDLAAADR 311
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARAFSLLSIAGVSGF 383
R +++ LG+ IL++P+ P + S +E RAR F L +AG++G
Sbjct: 312 TLATARNRINSALGET-ILLLPSASSTAPTRASAALGGSVIEDTRARTFQLTCLAGITGR 370
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
VS PL + PV + + GSD L L
Sbjct: 371 PAVSNPLPV-GGPPVGLCAVGPRGSDLALATL 401
>gi|111022991|ref|YP_705963.1| amidase [Rhodococcus jostii RHA1]
gi|110822521|gb|ABG97805.1| possible amidase [Rhodococcus jostii RHA1]
Length = 454
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 195/406 (48%), Gaps = 47/406 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+ D++ V G G G+ T TA V +L GA +G D++
Sbjct: 82 PLAGMRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLAQTDDL 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +G N+ +GTP NP A DR+PGG++SG+A AV D LG DT GSVR+PASY G
Sbjct: 142 GYGHSGINQQFGTPPNPRAEDRLPGGATSGAASAVAQGSADIGLGIDTTGSVRIPASYQG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF PS AVST G+ P++ +FDT W D L V LL L + P +
Sbjct: 202 LYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAET----PFRSAL 257
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + + G + +V + L + K +P L +
Sbjct: 258 TSDGINAVA------EAGALGAVRR----------ALTAWEKSSLPRLTW--------TD 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG--PGI----SERVWEAVRTSAQK 320
I L A+ +Q YE HGDWV+ LG PG + R+WE+ T +K
Sbjct: 294 TDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFADASRIWES--TYGRK 351
Query: 321 -IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--ARAFSLLS- 376
I + ++ +T ++A +GD +L++P PP+ PS + FR RA +L+
Sbjct: 352 LIKLGEASQT-----ITAYVGDS-LLLLPATSSTPPERTSYPSG-DRFRNTMRATGMLTC 404
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+A +SG ++PL D +PV + L+ HG D +L +V L +
Sbjct: 405 LATISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVAGLGGS 450
>gi|404446236|ref|ZP_11011354.1| amidase [Mycobacterium vaccae ATCC 25954]
gi|403650788|gb|EJZ05989.1| amidase [Mycobacterium vaccae ATCC 25954]
Length = 420
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 197/393 (50%), Gaps = 36/393 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G T AIKD++ + GH G GN W TSTAPAV A+L+GGA G + DE
Sbjct: 55 PLTGDTVAIKDLYALAGHKVGAGNEVWLAQAPVETSTAPAVAALLAGGAAVAGISRTDEF 114
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G N HYGTP NP AP+R+PGGSSSGSA AV L LGTDTGGS+R+P+SY G
Sbjct: 115 AYSLAGTNGHYGTPPNPAAPERIPGGSSSGSASAVALGLTTIGLGTDTGGSIRIPSSYQG 174
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP-SQVI 205
++G R +H A+S G+IP+A SFDTVGW D L +V V L D+ V P + +
Sbjct: 175 LYGIRTTHGAISVDGLIPLAPSFDTVGWMTRDRAELVKVAGV---LEPDLPAVVPFPRAV 231
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
+A+ + L+ + +V E I D++
Sbjct: 232 YADSLIALAD-------PDVASAVRAAIADWPAELPI------DRI-------------- 264
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
E+ L A ++ Q +E HG W+ L P + R A SA+++
Sbjct: 265 EFDAGQLPLWVKAFQIRQGWEAWRAHGAWIDLHWDALNPDVRSRFEAAAARSAEELSGAD 324
Query: 326 SVKTELRAALSALLGDHGILVIP---TVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+V RA + A LGD +L++P +V P + +E RAR F L +AG+SG
Sbjct: 325 AVLASARATIDAALGD-AVLILPSASSVAPPRDSAALGGEVIEDIRARTFQLTCLAGISG 383
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
VS PL + P+ I + SD L L
Sbjct: 384 RPAVSSPLPVA-GPPIGICAVGPRNSDRALAAL 415
>gi|336246966|ref|YP_004590676.1| amidase [Enterobacter aerogenes KCTC 2190]
gi|334733022|gb|AEG95397.1| amidase [Enterobacter aerogenes KCTC 2190]
Length = 381
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 183/417 (43%), Gaps = 85/417 (20%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
LTFA+KD D+ G T G+P + A A V A+L G GKT + E+A+ +
Sbjct: 27 LTFAVKDSLDIAGFPTRAGSPVL-QDAPPAVRHAAVVEALLDNGCQLRGKTTLHELAFGV 85
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N H GTP NP P +PGGSSSGSA V A VDF++GTDTGGSVR+PA+ CG+ G
Sbjct: 86 TGINPHSGTPRNPHYPQLIPGGSSSGSAAVVAAGEVDFAVGTDTGGSVRMPAACCGVAGL 145
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+PS +S AGV+P S D VG +FA D
Sbjct: 146 KPSFGRLSRAGVMPTESSLDCVG-------------------------------LFARDI 174
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV---KDKVPSLQHFLSEGNKEQEY 267
L Q L K+ LG+ + P++ + E E
Sbjct: 175 ATLR--------QALAKA--------------LGESAPPARRDAPAISYLAGTATPEIEQ 212
Query: 268 SIPSLAALSSAMRLLQRYE---FKNNHGDWVTTVK-------------PDLGPGISERVW 311
I ++ L A R E F H +T + P+L P ++ R+
Sbjct: 213 LI--VSRLQQAGLAWTRAELPGFNEAHQAGLTVISQENWLAFHSIINAPNLAPDVARRIH 270
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--- 368
Q+ +SV+ + AA+ A L ++V+PT+P PP L+ L+V
Sbjct: 271 AGAEIGPQQRQAAESVRQQFSAAVDAQLAKTPLIVLPTLPECPPTLEEAADPLKVVNLTR 330
Query: 369 -ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
R F+L SG +S+PLG ++ PVA+ L+A + LLN E L LK
Sbjct: 331 LVRPFNL------SGHPALSLPLGEINHRPVALQLVANKNKEFDLLNYAEYLLEKLK 381
>gi|345299640|ref|YP_004828998.1| amidase [Enterobacter asburiae LF7a]
gi|345093577|gb|AEN65213.1| Amidase [Enterobacter asburiae LF7a]
Length = 374
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 184/420 (43%), Gaps = 62/420 (14%)
Query: 6 SDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
S+ + E+F+L L FA+KD D+ G+ T G P A T AA S A
Sbjct: 5 SESNGYTEQFILGEGD---------LRFAVKDTLDIAGYRTQAGCPALA-TSPAAHSHAS 54
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
V +L GKT + E+A+ + G N GTP N P +PGGSSSGSA V +
Sbjct: 55 VVSQLLENRCVLTGKTTLHELAFGVTGINPRCGTPVNSRFPALIPGGSSSGSAAVVASGE 114
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
VDFSLGTDTGGSVR+PA+ CG+ G +P + +S GV+P S D VG F D +L +V
Sbjct: 115 VDFSLGTDTGGSVRMPAACCGVMGLKPGYGVLSRQGVMPAESSLDCVGVFTRDAAVLRQV 174
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
L S+P D L L I+ IL
Sbjct: 175 MTRL-------------------------SVPVDAPLNALPPVAFVLAAEPDIDACILNA 209
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT--VKPDLG 303
+ G QE ++P L A L +E G + + V PD
Sbjct: 210 LSQ-----------AGVSPQEITLPLLEEAHRAGLTLISHENWLALGPLLASGAVSPD-- 256
Query: 304 PGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
++ R+ S + +++ + V+ L A+L +L + T+P PP LQ
Sbjct: 257 --VASRIRAGANVSREALELAEKVRVAFSEHLDAVLEQTPLLALATLPELPPTLQEAQDP 314
Query: 364 LEVFR----ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
L V R F+L SG +++P+G D PVA+ L+A+ G DG L+ E L
Sbjct: 315 LTVVNLTRLVRPFNL------SGHPAITLPVGEIDGRPVALQLVARKGQDGLLVQAAEWL 368
>gi|397736411|ref|ZP_10503093.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodococcus sp. JVH1]
gi|396927601|gb|EJI94828.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodococcus sp. JVH1]
Length = 454
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 194/406 (47%), Gaps = 47/406 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+ D++ V G G G+ T TA V +L GA +G D++
Sbjct: 82 PLAGMRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLAQTDDL 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +G N+ +GTP NP A DR+PGG++SG+A AV D LG DT GS+R+PASY G
Sbjct: 142 GYGHSGINQQFGTPPNPRAEDRLPGGATSGAASAVAQGSADIGLGIDTTGSIRIPASYQG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF PS AVST G+ P++ +FDT W D L V LL L + P +
Sbjct: 202 LYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAET----PFRSAL 257
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + + G + +V + L + K +P L +
Sbjct: 258 TSDGINAVA------EAGALGAVRR----------ALTAWEKSSLPRLTW--------TD 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV------KPDLGPGISERVWEAVRTSAQK 320
I L A+ +Q YE HGDWV+ +PD + R+WE+ T +K
Sbjct: 294 TDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPDRNFADASRIWES--TYGRK 351
Query: 321 -IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--ARAFSLLS- 376
I + ++ +T ++A +GD +L++P PP+ PS + FR RA +L+
Sbjct: 352 LIKLGEASQT-----ITAYVGDS-LLLLPATSSTPPERTSYPSG-DRFRNTMRATGMLTC 404
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+A +SG ++PL D +PV + L+ HG D +L +V L +
Sbjct: 405 LATISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVAGLGGS 450
>gi|440286737|ref|YP_007339502.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Enterobacteriaceae bacterium strain FGI 57]
gi|440046259|gb|AGB77317.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Enterobacteriaceae bacterium strain FGI 57]
Length = 373
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 189/395 (47%), Gaps = 53/395 (13%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L FA+KD D+ GH T G P A A A V +L+ G GKT + E+A+ +
Sbjct: 21 LRFAVKDTLDIAGHPTRAGCPALADAPKA-KQHARIVKVLLNSGCQLTGKTTLHELAFGV 79
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N GTP NP P +PGGSSSGSA V VDF+LGTDTGGSVR+PA+ CG+ G
Sbjct: 80 TGINPWSGTPVNPQYPTLIPGGSSSGSATVVANGDVDFALGTDTGGSVRMPAACCGVLGL 139
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV-GRVLLQLADDVNLVRPSQVIFAED 209
+P + +S GV+P S D VG FA +P+IL V RV L + + + IFA
Sbjct: 140 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILREVLARVALPVDAPLESLPAIGFIFAAQ 199
Query: 210 CLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
+ LV ++E L + + +LG+ + L+ N+E +
Sbjct: 200 ---------PDIDALLVDALEALGIAANSVTLPLLGEAHRAG-------LTIINRENWLA 243
Query: 269 IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
+L A +H V PD ++ R+ +++++ ++V+
Sbjct: 244 FNALLA---------------SHA-----VSPD----VASRIQAGESITSEQLASAENVR 279
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFC 384
T+ A ++ALL + +L + T+P PP L+ L V R F+L SG
Sbjct: 280 TQFTAQVNALLEETPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPFNL------SGHP 333
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+S+P+G PVA+ L+A G +G L+ E L
Sbjct: 334 ALSLPMGELQGRPVALQLVAGFGEEGLLVQAAEWL 368
>gi|419961071|ref|ZP_14477080.1| amidase [Rhodococcus opacus M213]
gi|414573392|gb|EKT84076.1| amidase [Rhodococcus opacus M213]
Length = 454
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 194/406 (47%), Gaps = 47/406 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G A+ D++ V G G G+ T TA V +L GA +G D++
Sbjct: 82 PLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLAQTDDL 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +G N+ +GTP NP A D +PGG++SG+A AV D LG DT GSVR+PASY G
Sbjct: 142 GYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIPASYQG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF PS AVST G+ P++ +FDT W D L V LL L + P +
Sbjct: 202 LYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAET----PFRSAL 257
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + + G + +V + L + K +P L +
Sbjct: 258 TSDGINAVA------EAGALGAVRR----------ALTAWEKSSLPRLTW--------TD 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG--PG----ISERVWEAVRTSAQK 320
I L A+ +Q YE HGDWV+ LG PG + R+WE+ T +K
Sbjct: 294 TDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWES--TYGRK 351
Query: 321 -IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--ARAFSLLS- 376
I + ++ +T ++A +GD +L++P P+ PS + FR RA +L+
Sbjct: 352 LIKLAEASQT-----ITAYVGDS-LLLLPATSSTAPERTSYPSG-DRFRNTMRATGMLTC 404
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+A +SG ++PL D +PV + L+ HG D +L +V +L +T
Sbjct: 405 LASISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVASLGDT 450
>gi|384100035|ref|ZP_10001102.1| amidase [Rhodococcus imtechensis RKJ300]
gi|383842413|gb|EID81680.1| amidase [Rhodococcus imtechensis RKJ300]
Length = 454
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 194/406 (47%), Gaps = 47/406 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G A+ D++ V G G G+ T TA V +L GA +G D++
Sbjct: 82 PLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLAQTDDL 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +G N+ +GTP NP A D +PGG++SG+A AV D LG DT GSVR+PASY G
Sbjct: 142 GYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIPASYQG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF PS AVST G+ P++ +FDT W D L V LL L + P +
Sbjct: 202 LYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAET----PFRSAL 257
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + + G + +V + L + K +P L +
Sbjct: 258 TSDGINAVA------EAGALGAVRR----------ALTAWEKSSLPRLTW--------TD 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG--PG----ISERVWEAVRTSAQK 320
I L A+ +Q YE HGDWV+ LG PG + R+WE+ T +K
Sbjct: 294 TDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWES--TYGRK 351
Query: 321 -IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--ARAFSLLS- 376
I + ++ +T ++A +GD +L++P P+ PS + FR RA +L+
Sbjct: 352 LIKLAEASQT-----ITAYVGDS-LLLLPATSSTAPERTSYPSG-DRFRNTMRATGMLTC 404
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+A +SG ++PL D +PV + L+ HG D +L +V +L +T
Sbjct: 405 LASISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVASLGDT 450
>gi|126731637|ref|ZP_01747442.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37]
gi|126707803|gb|EBA06864.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37]
Length = 384
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 195/409 (47%), Gaps = 58/409 (14%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
GL A+KD D+ GHVT G+ A + A + A V +L+ GA +GK M E+AY
Sbjct: 22 GLAVAVKDCIDIAGHVTASGSAALA-DGAPAKAHAKVVEDLLASGAHVVGKAKMHELAYG 80
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N +GTP NP PDR+PGGSSSGSAVAV L D ++GTDTGGSVR PA CG++G
Sbjct: 81 MTGVNAAFGTPVNPRWPDRIPGGSSSGSAVAVAGDLCDAAVGTDTGGSVRQPAICCGLYG 140
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ +S G P + D VG A K+L R +Q AD P
Sbjct: 141 IKPTFGRISRDGCHPAESTLDCVGVLARSAKVLTRA----MQAADPTFTPEP-------- 188
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY-S 268
L++ P R+ + V ++ G E ++ G L EG E Y
Sbjct: 189 ---LTAAP--RMARVRVDDLDPRIG----EPLVYG-------------LMEGLPEAGYVQ 226
Query: 269 IPSL-AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+P + A +AM ++ ++ H P LG + R+ A + +++ + V
Sbjct: 227 LPGMEEAFDAAMTVIGAETYRACHA---LLDDPRLGDDVRARLSAAGAITPDRLEQAEDV 283
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPS-ALEVFR-ARAFSLLSIAGVSGF 383
+T A + A L +L+ P +P PP L DP+ L + R R F+L +G
Sbjct: 284 RTRFTAEVDAALASVDVLITPAMPTVPPTLDEATDPAKVLPLTRFLRPFNL------TGH 337
Query: 384 CQVSIP-LGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL----KEEL 427
+ +P LG LP+ + ++ + G+D L + E + +T KEE
Sbjct: 338 PAIVLPVLG---ELPLGLQIVGRKGADAQLCAVAEWMADTCPMFRKEEF 383
>gi|432336008|ref|ZP_19587549.1| amidase [Rhodococcus wratislaviensis IFP 2016]
gi|430777076|gb|ELB92458.1| amidase [Rhodococcus wratislaviensis IFP 2016]
Length = 454
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 194/406 (47%), Gaps = 47/406 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G A+ D++ V G G G+ T TA V +L GA +G D++
Sbjct: 82 PLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLAQTDDL 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +G N+ +GTP NP A D +PGG++SG+A AV D LG DT GSVR+PASY G
Sbjct: 142 GYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIPASYQG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF PS AVST G+ P++ +FDT W D L V LL L + P +
Sbjct: 202 LYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAET----PFRSAL 257
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + + G + +V + L + K +P L +
Sbjct: 258 TSDGI------NGVAEAGALGAVRR----------ALTAWEKSSLPRLTW--------TD 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG--PG----ISERVWEAVRTSAQK 320
I L A+ +Q YE HGDWV+ LG PG + R+WE+ T +K
Sbjct: 294 TDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWES--TYGRK 351
Query: 321 -IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--ARAFSLLS- 376
I + ++ +T ++A +GD +L++P P+ PS + FR RA +L+
Sbjct: 352 LIKLAEASQT-----ITAYVGDS-LLLLPATSSTAPERTSYPSG-DRFRNTMRATGMLTC 404
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+A +SG ++PL D +PV + L+ HG D +L +V +L +T
Sbjct: 405 LASISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVASLGDT 450
>gi|392941923|ref|ZP_10307565.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Frankia sp. QA3]
gi|392285217|gb|EIV91241.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Frankia sp. QA3]
Length = 424
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 111/175 (63%), Gaps = 3/175 (1%)
Query: 16 VLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGA 75
+L P+ S PL GL A+KD+F V G+ G GNP W + A AV A+ + GA
Sbjct: 19 LLAPTGSG---PLDGLRVAVKDLFAVGGYRIGAGNPRWLAEAPVEPADAEAVRALRAAGA 75
Query: 76 TSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTG 135
G DE+A+S++G N HYGTP NP APDRV GGSSSG A AV A D LGTDT
Sbjct: 76 AIAGIAQTDELAFSLSGANVHYGTPPNPAAPDRVTGGSSSGPASAVAAGWADVGLGTDTA 135
Query: 136 GSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
GS+RVPAS CG++G RP+ AV+ GV+ +A SFDTVGW DP +L VG VLL
Sbjct: 136 GSIRVPASVCGLYGLRPTRGAVAAGGVLGLAPSFDTVGWLTADPGLLRAVGEVLL 190
>gi|226365496|ref|YP_002783279.1| amidase [Rhodococcus opacus B4]
gi|226243986|dbj|BAH54334.1| putative amidase [Rhodococcus opacus B4]
Length = 454
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 191/405 (47%), Gaps = 45/405 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL A+ D++ V G G G+ T TA V +L GA +G D++
Sbjct: 82 PLTGLRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLAQTDDL 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +G N+ +GTP NP A DR+PGG++SG+A AV D LG DT GSVR+PASY G
Sbjct: 142 GYGHSGVNQQFGTPPNPRAEDRLPGGATSGAASAVAQGGADIGLGVDTTGSVRIPASYQG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF PS AV+T G+ P++ +FDT W D L V LL L + P +
Sbjct: 202 LYGFAPSRGAVATDGLFPLSPTFDTPAWVCSDLDTLVAVSGALLPLTAET----PFRGAL 257
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + + G + +V + L + K +P L +
Sbjct: 258 TSDGINAVA------EAGALGAVRR----------ALTAWEKSSLPRLTW--------TD 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG--PGI----SERVWEAVRTSAQK 320
I L A+ +Q YE HGDWV+ LG PG + R+WE T +K
Sbjct: 294 TDIGRLPDWYDAVVDVQGYEAWRLHGDWVSQAMSSLGTEPGRNFADASRIWET--TYGRK 351
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--ARAFSLLS-I 377
+ ++ E ++A +GD +L++P P+ + D S FR R +L+ +
Sbjct: 352 L----TMLAEASQTITAYVGDS-LLLLPATSSVAPERKGDTSGGR-FRNTMRTTGMLTCL 405
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
A +SG ++PL D PV + L+ +G D +L +V +L +T
Sbjct: 406 ASISGLPNATVPLRTDDGSPVGLCLVGPYGRDRDVLAVVASLGDT 450
>gi|118592593|ref|ZP_01549984.1| Amidase [Stappia aggregata IAM 12614]
gi|118434940|gb|EAV41590.1| Amidase [Stappia aggregata IAM 12614]
Length = 383
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 185/403 (45%), Gaps = 59/403 (14%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA-----VLAVLSGGATSIGKTIMD 84
GL+ A+KD D+ G VT G SAA S AP+ V ++L+ G IGK M
Sbjct: 21 GLSVAVKDCIDIAGEVTACG--------SAAVSHAPSEHADVVKSLLASGCKIIGKANMH 72
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+A+ + G N +GTP NP PDR+PGGSSSGSAVAV A L DFS+GTDTGGSVR PA
Sbjct: 73 ELAFGVTGVNTVFGTPVNPNWPDRIPGGSSSGSAVAVAAGLCDFSVGTDTGGSVRQPAIC 132
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CGI+G +P+ + +S G P S D VG FA R L + PS
Sbjct: 133 CGIYGLKPTFARISRKGCHPADSSLDCVGVFA----------RTSAGLTQAMAASDPS-- 180
Query: 205 IFAEDCL---QLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
E C +L+ + +D G S L K+P L+ +
Sbjct: 181 FKTETCTTAPRLAWVSTDPDPSG--DSFATL---------------SRKLPGLERITLDA 223
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
E A ++ M ++ YE G + +P LG + R+ +A + ++
Sbjct: 224 FDE---------AFAAGMTIIS-YETAQAFGHLL-EAEPPLGQDVKARIAKAQSVKSAEV 272
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
++V+T A+ L L++P +P PP L+ ++ F L +S
Sbjct: 273 KAAEAVRTRFTEAVDTALEQCDALIMPALPTVPPTLEAASDPAQIIPLTRF--LRPFNLS 330
Query: 382 GFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G + +P + D +LP+ + ++ + D L + E L +T
Sbjct: 331 GHPSLVLPFAIVDGSLPMGLQIVGRKADDARLCAIAEWLADTF 373
>gi|72161974|ref|YP_289631.1| hypothetical protein Tfu_1572 [Thermobifida fusca YX]
gi|71915706|gb|AAZ55608.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 408
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/163 (53%), Positives = 104/163 (63%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG A+KD+F V G+ G GNP W T APAV A+L GA +G E A
Sbjct: 44 LSGFRVAVKDLFAVAGYAIGAGNPTWLHEAPVETDHAPAVRALLHAGADIVGIVQTAEFA 103
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y + G N+HYGTP NP +P RVPGGSSSGSA AV L D LG+DT GS+R+PASYCG+
Sbjct: 104 YGLTGINQHYGTPPNPASPGRVPGGSSSGSASAVALGLADIGLGSDTAGSIRIPASYCGL 163
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
RP+H V TAG I +A S DTVGW P++LNRV VLL
Sbjct: 164 CSLRPTHGMVPTAGSIGLAPSLDTVGWITRTPRLLNRVSDVLL 206
>gi|424815583|ref|ZP_18240734.1| amidase [Escherichia fergusonii ECD227]
gi|325496603|gb|EGC94462.1| amidase [Escherichia fergusonii ECD227]
Length = 373
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 193/415 (46%), Gaps = 62/415 (14%)
Query: 11 FMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAV 70
F+E+F L L FA+KD D+ G T G P A A A V +
Sbjct: 10 FVEEFTLGAGE---------LRFAVKDTLDIAGRPTRAGCPALADAPKA-KQHARIVKVL 59
Query: 71 LSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSL 130
L+ G GKT + E+A+ + G N GTP NP P +PGGSSSGSA V VDF+L
Sbjct: 60 LNSGCQLTGKTTLHELAFGVTGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFAL 119
Query: 131 GTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
GTDTGGSVR+PA+ CG+ G +P + +S GV+P S D VG FA +P+IL VL
Sbjct: 120 GTDTGGSVRMPAACCGVLGLKPGYGVLSRQGVLPAYSSLDCVGIFAREPRILR---DVLT 176
Query: 191 QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
+LA V+ L S+P ++ +F + +L D ++
Sbjct: 177 RLALPVD-------------APLDSLP----------AIGFIFAAQPDIDALLVDTLE-- 211
Query: 251 VPSLQHFLSEGNKEQEYSIPSLA-ALSSAMRLLQRYEFKNNHGDWVT-TVKPDLGPGISE 308
+ G ++P L A + + ++ R + + + V PD ++
Sbjct: 212 --------ALGIAANSVTLPLLGEAHRAGLTIINRENWLAFNALLASHAVSPD----VAS 259
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR 368
R+ ++ ++ ++V+ + A ++ALL D +L + T+P PP L+ L V
Sbjct: 260 RIQAGESITSDQLASAENVRAQFTAQVNALLEDTPLLALATLPELPPTLEEAEDPLSVVN 319
Query: 369 ----ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
R F+L SG +S+P+G PVA+ L+A G +G L+ E L
Sbjct: 320 LTRLVRPFNL------SGHPAISLPMGELQGRPVALQLVAGFGEEGLLVQAAEWL 368
>gi|414174784|ref|ZP_11429188.1| hypothetical protein HMPREF9695_02834 [Afipia broomeae ATCC 49717]
gi|410888613|gb|EKS36416.1| hypothetical protein HMPREF9695_02834 [Afipia broomeae ATCC 49717]
Length = 431
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 185/409 (45%), Gaps = 31/409 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
S + PL G IKD+FD+ G VT G+ AT+ A V + GA K
Sbjct: 48 SGGSRGPLDGAVITIKDLFDIKGEVTRAGSKVLPARSKPATADAAIVTRLREAGAVIAAK 107
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T M E AYS G N HYGTP NP RVPGGSSSG+AVAVG + + ++GTDTGGS R+
Sbjct: 108 TNMTEFAYSGLGANPHYGTPGNPADRKRVPGGSSSGAAVAVGDGVGEIAIGTDTGGSTRI 167
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ GF+P+ V G P++ + D++G A +AD N
Sbjct: 168 PAAFCGVTGFKPTVKRVPRTGAFPLSFTLDSIGPIAR-------------SVADCANA-- 212
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
++ E LS V GLV+S + IE L D V P L
Sbjct: 213 -DAILAGETPSPLSPPALGDVRVGLVQS-------YPIEG--LDDVVGKAYPLALARLGS 262
Query: 261 GNKEQEYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
K + ++ +L+ + +A + E H + + P + R+ + + SA
Sbjct: 263 HWKGSDITLDALSIMHTANERGGVAPPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKISA 322
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ + A + AL +LV+PTV P + + S E F R L
Sbjct: 323 ADYILALRDRERGIAQMDALFDKVDVLVMPTVQIVAPTMD-EVSTPESFNKRNVQALMNT 381
Query: 379 GVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ F C +S+P+ L + LPV + L+ +HG D LL + + L+
Sbjct: 382 AIWNFFDTCAISLPIRLGNALPVGLMLVGRHGGDRKLLAIAAAVEKQLE 430
>gi|218548177|ref|YP_002381968.1| amidase [Escherichia fergusonii ATCC 35469]
gi|218355718|emb|CAQ88330.1| putative amidase [Escherichia fergusonii ATCC 35469]
Length = 376
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 192/415 (46%), Gaps = 62/415 (14%)
Query: 11 FMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAV 70
F+E+F L L FA+KD D+ G T G P A A A V +
Sbjct: 13 FVEEFTLGAGE---------LRFAVKDTLDIAGRPTRAGCPALADAPKA-KQHARIVKVL 62
Query: 71 LSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSL 130
L+ G GKT + E+A+ + G N GTP NP P +PGGSSSGSA V VDF+L
Sbjct: 63 LNSGCQLTGKTTLHELAFGVTGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFAL 122
Query: 131 GTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
GTDTGGSVR+PA+ CG+ G +P + +S GV+P S D VG FA +P+IL VL
Sbjct: 123 GTDTGGSVRMPAACCGVLGLKPGYGVLSRQGVLPAYSSLDCVGIFAREPRILR---DVLT 179
Query: 191 QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
+LA V+ L S+P ++ +F + +L D ++
Sbjct: 180 RLALPVD-------------APLDSLP----------AIGFIFAAQPDIDALLVDALE-- 214
Query: 251 VPSLQHFLSEGNKEQEYSIPSLA-ALSSAMRLLQRYEFKNNHGDWVT-TVKPDLGPGISE 308
+ G ++P L A + + ++ R + + + V PD ++
Sbjct: 215 --------ALGIAANSVTLPLLGEAHRAGLTIINRENWLAFNALLASHAVSPD----VAS 262
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR 368
R+ ++ ++ ++V+ + ++ALL D +L + T+P PP L+ L V
Sbjct: 263 RIQAGESITSDQLASAENVRVQFTGQVNALLEDTPLLALATLPELPPTLEEAEDPLSVVN 322
Query: 369 ----ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
R F+L SG +S+P+G PVA+ L+A G +G L+ E L
Sbjct: 323 LTRLVRPFNL------SGHPAISLPMGELQGRPVALQLVAGFGEEGLLVQAAEWL 371
>gi|254473871|ref|ZP_05087265.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudovibrio sp.
JE062]
gi|211956981|gb|EEA92187.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pseudovibrio sp.
JE062]
Length = 417
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 197/400 (49%), Gaps = 29/400 (7%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ ++KD+FD G VT G+ + R + A A V A+ + GA + G+T M E
Sbjct: 38 LPLHGVAVSLKDLFDEFGIVTSAGS-SFLRNRAPACEDAKVVSALKAAGAFTCGRTNMSE 96
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+A++ G N H+G+P N R+PGGSSSG+ +VG L D +L TDTGGSVR+PA+
Sbjct: 97 LAFTGLGLNPHFGSPENILDALRIPGGSSSGAMASVGLGLCDAALATDTGGSVRIPAALN 156
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
++GF+P+ +A+ST GV + SFDTVG+ A + R+ VL
Sbjct: 157 SLYGFKPTRAAISTKGVFSICPSFDTVGFIARSLHMCTRLHAVL---------------- 200
Query: 206 FAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ CL I S D + GLV S L G ++ + D+ + ++ G
Sbjct: 201 -SGQCLVPRKISSLDGLHVGLVAS--PLAEG--LDTQVSADFDR----AMLAIRDAGAII 251
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
S P+L ++ + + YE ++ +K P + ER+ ++ ++++++
Sbjct: 252 APVSEPALCHSTTCLGTICSYEATALVSGYLEGLKQTADPYVLERILQSAEVTSKEMEEA 311
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR-AFSLLSIAGVSGF 383
+S + E A + G IL+ PTVP P L S LE ++ + + ++ V G
Sbjct: 312 RSKRVEAIRAFKEMAGKFDILIAPTVPIIAPMLSDIDSNLEKIGSQLSQNTRAVNWVDG- 370
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C V+IP+ + + L + GSD +L + + +
Sbjct: 371 CAVTIPMNTYGTPGTGLMLFGRAGSDWHVLEMASLIDKVI 410
>gi|449534003|ref|XP_004173959.1| PREDICTED: outer envelope protein 64, mitochondrial-like, partial
[Cucumis sativus]
Length = 175
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
Query: 7 DYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+++F L QPS A + L+GLTFA+KD+FDV +VTGFGNPDW RTH A
Sbjct: 48 DFGAFIQRFELRPFPQPSPPAARQSLAGLTFAVKDVFDVKDYVTGFGNPDWKRTHDVAEK 107
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T V +L GA +GKT+MDE+ + I GENK YGTPTNP VPGGSSSGSAVAV
Sbjct: 108 TDEMVTLLLKNGAACVGKTVMDELGFGITGENKQYGTPTNPKLSSFVPGGSSSGSAVAVA 167
Query: 123 AKLVDFSL 130
+LVDF+L
Sbjct: 168 GELVDFAL 175
>gi|422806355|ref|ZP_16854787.1| amidase [Escherichia fergusonii B253]
gi|324112893|gb|EGC06869.1| amidase [Escherichia fergusonii B253]
Length = 373
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 192/415 (46%), Gaps = 62/415 (14%)
Query: 11 FMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAV 70
F+E+F L L FA+KD D+ G T G P A A A V +
Sbjct: 10 FVEEFTLGAGE---------LRFAVKDTLDIAGRPTRAGCPALADAPKA-KQHARIVKVL 59
Query: 71 LSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSL 130
L+ G GKT + E+A+ + G N GTP NP P +PGGSSSGSA V VDF+L
Sbjct: 60 LNSGCQLTGKTTLHELAFGVTGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFAL 119
Query: 131 GTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
GTDTGGSVR+PA+ CG+ G +P + +S GV+P S D VG FA +P+IL VL
Sbjct: 120 GTDTGGSVRMPAACCGVLGLKPGYGVLSRQGVLPAYSSLDCVGIFAREPRILR---DVLT 176
Query: 191 QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
+LA V+ L S+P ++ +F + +L D ++
Sbjct: 177 RLALPVD-------------APLDSLP----------AIGFIFAAQPDIDALLVDALE-- 211
Query: 251 VPSLQHFLSEGNKEQEYSIPSLA-ALSSAMRLLQRYEFKNNHGDWVT-TVKPDLGPGISE 308
+ G ++P L A + + ++ R + + + V PD ++
Sbjct: 212 --------ALGIAANSVTLPLLGEAHRAGLTIINRENWLAFNALLASHAVSPD----VAS 259
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR 368
R+ ++ ++ ++V+ + ++ALL D +L + T+P PP L+ L V
Sbjct: 260 RIQAGESITSDQLASAENVRVQFTGQVNALLEDTPLLALATLPELPPTLEEAEDPLSVVN 319
Query: 369 ----ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
R F+L SG +S+P+G PVA+ L+A G +G L+ E L
Sbjct: 320 LTRLVRPFNL------SGHPALSLPMGELQGRPVALQLVAGFGEEGLLVQAAEWL 368
>gi|119946560|ref|YP_944240.1| amidase [Psychromonas ingrahamii 37]
gi|119865164|gb|ABM04641.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Psychromonas ingrahamii 37]
Length = 411
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 180/397 (45%), Gaps = 25/397 (6%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG F KD+FDV G+VTG GNP W +H A T+P + +L GA G+ E+A
Sbjct: 23 LSGYRFVFKDVFDVQGYVTGAGNPTWLMSHEPALHTSPIITQLLIQGAHCSGRVQSSELA 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+G N HYGT N AP + G SS + AV DF+LG D G +R+ ASYCG+
Sbjct: 83 CGFDGMNTHYGTAINHLAP-KCQSGGSSSCSAAVARGDGDFALGIDAAGEIRISASYCGL 141
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG R +++A+ +A+SFDT G + +++ V L + V+ +
Sbjct: 142 FGLRATYAALPLDHSFSLAKSFDTAGLLTRNLTVMSNVVTSLFREQPPVDQFEDVFIFVE 201
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ L+L V + L + +L V+ D + D
Sbjct: 202 KRALELM---DSEVKEELTNKLNRLARNRY---VVSTDSLLDICEV-------------- 241
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA-QKIDVCQS 326
SL L+ ++Q YE H +W+ + + +S R ++ S + ++ Q
Sbjct: 242 ---SLEELAEWFSIIQGYELIQEHSEWLAEHQSAVTKDVSRRFDKSKNISIDEYVEAKQK 298
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+ + L G L +PT PG PP+L+ ++L +R R L ++A + G Q+
Sbjct: 299 MANFSTLFIYLLKSKGGWLCLPTTPGLPPELKQSVNSLIYYRKRLLGLTALASLCGLPQL 358
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+PLG + +SL+ S+ L+ + L +L
Sbjct: 359 HLPLGKINGKSYGLSLIGMPNSEKKLIKQGQYLLQSL 395
>gi|402701981|ref|ZP_10849960.1| amidase [Pseudomonas fragi A22]
Length = 446
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 198/408 (48%), Gaps = 43/408 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G +T G+ A AA+ A V + + GA +G+T M E A
Sbjct: 68 LAGLPVSIKDLFDVAGQITASGSSLLAEA-PAASRDAVVVERLRAAGAIVLGRTNMSEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP PCA R+ GGSSSG+AV+V ++ LGTDTGGS+R+PA++C +
Sbjct: 127 FSGLGLNPHYGTPLTPCAEQRIAGGSSSGAAVSVALEMAVAGLGTDTGGSIRIPAAFCNL 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+PS S V G P+A S D++G L R +AD + L R ++
Sbjct: 187 TGFKPSASRVPLTGTFPLAPSLDSIG-------ALTR------SVADSILLDR---ILSG 230
Query: 208 EDCLQLSS-IPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
E QL++ +PS GL +V + F ++ + + + SL G +
Sbjct: 231 E---QLATPMPS---LAGLRLAVTRDFVLDQLDETVAVAFER----SLGLLAEAGASIRW 280
Query: 267 YSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT-----SAQ 319
+ P L L +A L E + H W+ + D RV + +R +A
Sbjct: 281 FDFPELHQLPRINAAGGLTAAEAWHGHRQWL---EGDDAQQYDARVAQRIRRGAAIGAAD 337
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
+D Q+ + L A LGD ++P+V PPKL D + E F A +L
Sbjct: 338 YLDT-QAERQRLIAIARERLGDADAWLMPSVAVVPPKL-ADLATDESFFAANGLVLRNTS 395
Query: 380 VSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
V F C +S+P L + LPV +S+ HG D +L + + L+
Sbjct: 396 VINFLDGCALSLPCQLAEELPVGLSIAGLHGQDARVLQVSRAVEALLR 443
>gi|398913736|ref|ZP_10656595.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398179821|gb|EJM67420.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 403
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 197/408 (48%), Gaps = 34/408 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +IKD+FDV G VT G+ A+ A A AV + + GA +G+T M E
Sbjct: 19 PLAGLPISIKDLFDVRGQVTTAGSSLLAQA-PPALDDAFAVARLRAAGAVMLGRTNMSEF 77
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP NP DR+ GGSSSG+AV+V + LGTDTGGS+R+PA++C
Sbjct: 78 AFSGLGLNPHYGTPVNPYDNDRIAGGSSSGAAVSVALDMAVAGLGTDTGGSLRIPAAFCA 137
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRVGRVLLQLADDVNLVRPSQ 203
+ GF+P+ S V T G +P+A+S D++G A D +L++V + QL D RP+
Sbjct: 138 LVGFKPTASRVPTLGTLPLAESLDSIGAIAHSVADCILLDQV--LSGQLLD----TRPAN 191
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ L++ ++ D V L + V G E V+ + + ++ H+
Sbjct: 192 L----RGLRV-AVTRDFVLDNLDREV-----GAAFERVL---KLLNDAGAVIHWFDFSEL 238
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT-VKPDLGPGISERVWEAVRTSAQKID 322
+ SI L++A E N H W+ + + P +++R+ SA
Sbjct: 239 CELPSINESGGLTAA-------ESWNFHQHWLQSELDTRYDPRVAQRIRRGASLSAADYL 291
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ L A L D + ++PTV P L+ E+F A +L V
Sbjct: 292 ELIGHRRRLSEEAKARLSDFDVWLMPTVACTAPLLKELEKNDELFFATNALVLRNTSVIN 351
Query: 383 F---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
F C +S+P L L + +S+ +G D +L ++ L E L
Sbjct: 352 FIDGCAISVPCHLPGELAIGLSICGLNGHDARVLQAARSIEVLLSEYL 399
>gi|313679128|ref|YP_004056867.1| amidase [Oceanithermus profundus DSM 14977]
gi|313151843|gb|ADR35694.1| Amidase [Oceanithermus profundus DSM 14977]
Length = 441
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 184/403 (45%), Gaps = 48/403 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ G+ +KD+ DV G VT G+ AR A S APAV + GA +GK+ ++E+
Sbjct: 62 PVDGVPVLVKDLLDVTGTVTAAGSAVLARLRPPAASDAPAVRNLQRAGAVVVGKSQLNEL 121
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N H+GTP N PD VPGGSSSGSAVAV LV ++GTDTGGSVR+PA++ G
Sbjct: 122 AFSGLGLNPHFGTPQNALNPDWVPGGSSSGSAVAVARGLVPLAVGTDTGGSVRIPAAFNG 181
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN--LVRPS-- 202
+ GF+PS +ST GV P+A S DTVG A + + L LA + + L RPS
Sbjct: 182 LVGFKPSWGRISTRGVTPLAVSLDTVGPLA---RRVEDAWAFFLALAGEPHRPLARPSGP 238
Query: 203 -QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+++ D L+ R + + E+ +L + G
Sbjct: 239 PRLLVPADLLE-------RARPEVQGAFER---------------------ALARLEAAG 270
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+ + +P LA + R + W + + G + RV V A++
Sbjct: 271 ARLERRPLPGLAEVYDLYRRYGALAAHEAYARWRGLIA-EHGAAMDPRVVRRVLAVAERP 329
Query: 322 DVCQSVKTELRA----ALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVFRA--RAFSL 374
V RA A A L LV+PT P PPP L +++ S FRA R +
Sbjct: 330 SVHHVQLRRERARRVPAFWAGLRGTDALVLPTAPVPPPLLAEVEASEEAFFRANDRVLAY 389
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
+ VS+PL + + L A G D L L
Sbjct: 390 TMLFNFYAGPAVSLPLAPG----LGLMLAAAPGRDAALFALAR 428
>gi|374333361|ref|YP_005083545.1| amidase signature enzyme [Pseudovibrio sp. FO-BEG1]
gi|359346149|gb|AEV39523.1| Amidase signature enzyme [Pseudovibrio sp. FO-BEG1]
Length = 417
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 196/400 (49%), Gaps = 29/400 (7%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ ++KD+FD G VT G+ + R + A A V A+ + GA + G+T M E
Sbjct: 38 LPLHGVAVSLKDLFDEFGIVTSAGS-SFLRNRAPACEDAKVVSALKAAGAFTCGRTNMSE 96
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+A++ G N H+G+P N R+PGGSSSG+ +VG L D +L TDTGGSVR+PA+
Sbjct: 97 LAFTGLGLNPHFGSPENILDALRIPGGSSSGAMASVGLGLCDAALATDTGGSVRIPAALN 156
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
++GF+P+ +A+ST GV + SFDTVG+ A + R+ VL
Sbjct: 157 SLYGFKPTRAAISTKGVFSICPSFDTVGFIARSLHMCTRLHAVL---------------- 200
Query: 206 FAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ CL I S D + GLV S L G ++ + D+ + ++ G
Sbjct: 201 -SGQCLVPRKISSLDGLHVGLVAS--PLAEG--LDTQVSADFDR----AMLAIRDAGAII 251
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
S P+L ++ + + YE ++ +K P + ER+ ++ ++++++
Sbjct: 252 APVSEPALCHSTTCLGTICSYEATALVSGYLEGLKQTADPYLLERILQSAEVTSKEMEEA 311
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR-AFSLLSIAGVSGF 383
+S + E A + G IL+ PTVP P L S LE ++ + + ++ V G
Sbjct: 312 RSKRVEAIRAFKEMAGKFDILIAPTVPIIAPMLSDIDSNLEKIGSQLSQNTRAVNWVDG- 370
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +IP+ + + L + GSD +L + + +
Sbjct: 371 CAATIPMNTYGTPGTGLMLFGRAGSDWHVLEMASLIDKVI 410
>gi|424851475|ref|ZP_18275872.1| amidase [Rhodococcus opacus PD630]
gi|356666140|gb|EHI46211.1| amidase [Rhodococcus opacus PD630]
Length = 454
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 190/405 (46%), Gaps = 45/405 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G A+ D++ V G G G+ T TA V +L GA +G D++
Sbjct: 82 PLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLAQTDDL 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
Y +G N+ +GTP NP A D +PGG++SG+A AV D LG DT GSVR+PASY G
Sbjct: 142 GYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGAADIGLGVDTTGSVRIPASYQG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF PS AVST G+ P+A +FDT W D L V LL L + P +
Sbjct: 202 LYGFAPSRGAVSTDGLFPLAPTFDTPAWVCGDLDTLVAVSGALLPLTAET----PFRSAL 257
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D + + G + +V + L + K +P L +
Sbjct: 258 TSDGINAVA------EAGALGAVRR----------ALTAWEKSSLPRLTW--------TD 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG--PG----ISERVWEAVRTSAQK 320
I L A+ +Q YE HGDWV LG PG + R+WE+ T +K
Sbjct: 294 TDIGRLPDWYDAVVAVQGYEAWRLHGDWVGGAMTSLGDEPGRNFAAASRIWES--TYGRK 351
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR--ARAFSLLS-I 377
+ + E ++A +GD +L++P P+ PS + FR RA +L+ +
Sbjct: 352 LIMLG----EASQTITAYVGDS-LLLLPATSSTAPERTSYPSG-DRFRNTMRATGMLTCL 405
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
A +SG ++PL D +PV + L+ +G D +L +V +L +T
Sbjct: 406 ATISGLPNATVPLRTDDGVPVGLCLVGPYGRDRDVLAVVASLGDT 450
>gi|90418473|ref|ZP_01226385.1| putative amidase [Aurantimonas manganoxydans SI85-9A1]
gi|90338145|gb|EAS51796.1| putative amidase [Aurantimonas manganoxydans SI85-9A1]
Length = 441
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 187/394 (47%), Gaps = 26/394 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL AIKD+FD +G VT G+ +A ++ AT A AV + + GA G+T M E
Sbjct: 68 PLAGLLAAIKDLFDEEGEVTTSGSVHFA-GNAPATRDAVAVERLRAAGAIGCGRTNMSEF 126
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS G N HYGTP N P+R+PGGS+SG A+AV + DF+LG+DTGGSVR+PA++
Sbjct: 127 AYSGVGLNPHYGTPPNSHDPERIPGGSTSGGAIAVAFGIADFALGSDTGGSVRIPAAFNA 186
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ +AV G P++ ++D+VG A D V VL +D RP+
Sbjct: 187 LAGFKPTQAAVPLDGASPLSGTYDSVGPLALDIATCAAVHAVL--SGED----RPAPTT- 239
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ L+L + + +T + K V+ F +L+ EG + +
Sbjct: 240 GDKPLRLGVMRT-LLTDDMDKQVKADFEA-----------------ALKALRDEGIELVD 281
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ +A + R+L + H ++ ++ P + +R+ A + +
Sbjct: 282 VELAEIAQAGAVNRILVASDAHAIHRGYLDALETAGDPRVLKRIRAAESFGPGEAAAARQ 341
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
+ E A + L ++ PTVP PP L+ + A S C
Sbjct: 342 TRAEAIVAFADLADGFDAIIAPTVPIVPPLLEEVEDDFDRLNALVLRNPSTINFLDGCAA 401
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
++P+ LP +++ G D +L++ E +
Sbjct: 402 TVPMHRSGELPTGLTIFGPGGRDWHVLDVAEEVE 435
>gi|83943390|ref|ZP_00955849.1| amidase [Sulfitobacter sp. EE-36]
gi|83845622|gb|EAP83500.1| amidase [Sulfitobacter sp. EE-36]
Length = 401
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 182/405 (44%), Gaps = 45/405 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGL A+KD+FDV G VT G+ + S A A V + GA +G M E
Sbjct: 34 PLSGLNVAVKDLFDVRGQVTRAGSL-VRKDASPAIKDAVTVARLRGAGAGLVGHANMTEF 92
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS G N HYGTP P + GGS+SG A AV + D +LGTDTGGS R+PA++CG
Sbjct: 93 AYSGLGLNPHYGTPLTPLKEGCIAGGSTSGGASAVARGVADIALGTDTGGSARIPAAFCG 152
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FGF+ + +S G +P++ S D+VG +L R DV L+RP +
Sbjct: 153 LFGFKATAQTISREGAVPLSHSLDSVG-------VLTR----------DVGLLRPVLNVL 195
Query: 207 AEDCLQLSS------IPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
+ L SS +P + GL V F + V+ V + +L F
Sbjct: 196 RDRPLPASSAPRAVIVPENFGMDGLDTEVVDAFEAAL--EVLRASGVSVRRQTLDFF--- 250
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
++Y + S+ E + +HG + + +L P ++ R+ A + +
Sbjct: 251 ----EDYRALPVWQFSA-------VESRAHHGAYFDQTRAELDPRVASRMARADGVTGIE 299
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLSIA 378
+ + L A L GD + +P+V PPK D + + A S+A
Sbjct: 300 FARTIAAREALIARADRLFGDTPV-ALPSVAIMPPKPDDLNDDATYDRINLLALRNTSLA 358
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
V C VSIP+ H + L A G D L+ + ETL L
Sbjct: 359 NVIDGCSVSIPITDHPG--TGLMLTAPAGRDAMLITMAETLQGAL 401
>gi|423121983|ref|ZP_17109667.1| hypothetical protein HMPREF9690_03989 [Klebsiella oxytoca 10-5246]
gi|376393291|gb|EHT05951.1| hypothetical protein HMPREF9690_03989 [Klebsiella oxytoca 10-5246]
Length = 390
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 195/426 (45%), Gaps = 61/426 (14%)
Query: 6 SDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
S + F+ +F L + LTFA KD D+ G+ T G+P + AT+ A
Sbjct: 11 SAHSGFISRFTLGTGA---------LTFAAKDTLDIAGYPTRAGSPVL-QNAPEATAHAT 60
Query: 66 AVLAVL-SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
+ +L SGG GKT + E+A+ + G N GTP NP P +PGGSSSGSA V A
Sbjct: 61 VIQQLLDSGGCQLQGKTTLHELAFGVTGINAWSGTPLNPRYPALIPGGSSSGSATVVAAG 120
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
VDF++GTDTGGSVR+PA+ CGI G +P+ VS GV+P S D VG+F+ D L +
Sbjct: 121 EVDFAIGTDTGGSVRMPAACCGIVGLKPTWGRVSRQGVMPADSSLDCVGFFSRDVATLRQ 180
Query: 185 V-GRVLLQLADDVNLVRPSQV-IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
V R+ ++A V+ + + +F + + R+ Q G +
Sbjct: 181 VLARLPGEIAPAVSAHQAATAFLFGHATTDIEQLIRARLAQ----------AGMFPADAT 230
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
L + + + Q L+ ++E + SLA KP+L
Sbjct: 231 LPAFAE----AHQAGLTVISQENWQAFQSLAE------------------------KPEL 262
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
++ R+ S + + ++ A+ A L +++PT+P PP L+ +
Sbjct: 263 AEDVAVRLRAGAEISPHQRQAAERIRQTFTEAVDAQLARTPFILLPTLPACPPTLEEAAN 322
Query: 363 ALEVFR----ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVET 418
L V R F+L SG +++P+G + PVA+ ++A D LL E+
Sbjct: 323 PLNVVNLTRLVRPFNL------SGHPALTLPVGEINQRPVALQIVAGKNKDYELLCFAES 376
Query: 419 LHNTLK 424
L L+
Sbjct: 377 LMAKLQ 382
>gi|398385175|ref|ZP_10543200.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sphingobium sp. AP49]
gi|397721107|gb|EJK81657.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sphingobium sp. AP49]
Length = 459
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 180/404 (44%), Gaps = 35/404 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ G +IKD+FDV G T G+ A S AT AP V + GA +GKT M E
Sbjct: 82 PIDGAIVSIKDLFDVAGEPTRAGSLILA-DASPATVDAPVVARLKQAGAVIVGKTNMVEF 140
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP NP RVPGGS+SG VAV + + ++GTDTGGS R+PA+ CG
Sbjct: 141 AFSGVGANPHYGTPGNPADRARVPGGSTSGGGVAVADAMCEIAIGTDTGGSCRIPAALCG 200
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G++P+ + V T G P++ + D++G A R +L P ++
Sbjct: 201 VVGYKPTKARVPTDGAFPLSPTLDSIGPIATSVDACFRTDAILAGET-------PRRLDL 253
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE----NVILGDYVKDKVPSLQHFLSEGN 262
A + IP L +V F + V L D V + ++Q S
Sbjct: 254 APLKGLRAGIPQGLPLADLDATVAARFADALARLGKAGVTLSDEVFPQFDAMQALQSP-- 311
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+P + E H D + T D P + R+ + ++
Sbjct: 312 ------VP-----------IASIEAYAIHRDRIATRAQDFDPIVLARMQAGRDVTPERHR 354
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ +T L ++ A L +LV+PT P P Q + + ++F AR LL G+
Sbjct: 355 QMLAERTALVRSMDARLAGLDMLVLPTTPIVAPT-QAEVANPDIFVARNRLLLRNTGLGN 413
Query: 383 ---FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +S+PL LPV + L+A+ G D L + + L
Sbjct: 414 VFDLCAISLPLPRQGGLPVGLMLMARAGQDQRLFAIAAAVEKLL 457
>gi|381203203|ref|ZP_09910311.1| amidase [Sphingobium yanoikuyae XLDN2-5]
Length = 459
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 178/400 (44%), Gaps = 27/400 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ G +IKD+FDV G T G+ A A T AP V + GA +GKT M E
Sbjct: 82 PIDGAIVSIKDLFDVAGEPTRAGSLILADAPPA-TVDAPVVARLKQAGAVIVGKTNMVEF 140
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP NP RVPGGS+SG VAV + + ++GTDTGGS R+PA+ CG
Sbjct: 141 AFSGVGVNPHYGTPGNPADRARVPGGSTSGGGVAVADAMCEIAIGTDTGGSCRIPAALCG 200
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G++P+ + V T G P++ + D++G A R +L A P ++
Sbjct: 201 VVGYKPTKARVQTDGAFPLSPTLDSIGPIATSVDACFRTDAILAGEA-------PRRLEL 253
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A + IP L +V F + + G + D+V F + +
Sbjct: 254 APLKGLRAGIPQGLPLADLDATVAACFADALAQLGKAGMTLSDEV--FPQFDAMQALQSP 311
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
I S+ A + H D + T D P + R+ + ++
Sbjct: 312 VPIASVEAYAI-------------HRDRIATRAQDFDPIVLARMQAGRDVTPERHRQMLV 358
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG---F 383
+ L ++ A L D IL +PT P P Q + + + F AR LL G+
Sbjct: 359 ERAALVRSMDARLADLDILALPTTPIVAPT-QAEVANADAFVARNRLLLRNTGLGNSFDL 417
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +S+PL LPV + L+A+ G D L + + L
Sbjct: 418 CAISLPLPREGGLPVGLMLMARAGQDRRLFAIAAAVEKLL 457
>gi|427410189|ref|ZP_18900391.1| hypothetical protein HMPREF9718_02865 [Sphingobium yanoikuyae ATCC
51230]
gi|425712322|gb|EKU75337.1| hypothetical protein HMPREF9718_02865 [Sphingobium yanoikuyae ATCC
51230]
Length = 454
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 179/400 (44%), Gaps = 27/400 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ G +IKD+FDV G T G+ A AT AP V + GA +GKT M E
Sbjct: 77 PIDGAIVSIKDLFDVAGEPTRAGSLILA-DAPPATVDAPVVARLKQAGAVIVGKTNMVEF 135
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP NP RVPGGS+SG VAV ++ + ++GTDTGGS R+PA+ CG
Sbjct: 136 AFSGVGVNPHYGTPGNPADRARVPGGSTSGGGVAVADQMCEIAIGTDTGGSCRIPAALCG 195
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G++P+ + V T G P++ + D++G A R +L A P ++
Sbjct: 196 VVGYKPTKARVPTDGAFPLSPTLDSIGPIATSVDACFRTDAILAGEA-------PRRLDL 248
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A + IP L +V F + G + D+V + F + +
Sbjct: 249 APLKGLRAGIPQGLPLADLDATVAARFADALARLGQAGMTLSDEV--FRQFDAMQALQSP 306
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
I S+ A + H D + T D P + R+ + ++
Sbjct: 307 VPIASVEAYAI-------------HRDRIATRAQDFDPIVLARMQAGRDVTPERHKQMLV 353
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG---F 383
+ L ++ A L ILV+PT P P Q + + + F AR LL G+
Sbjct: 354 ERAALVRSMDARLAGLDILVLPTTPIVAPT-QAEVANADAFVARNRLLLRNTGLGNSFDL 412
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +S+PL LPV + L+A+ G D L + + L
Sbjct: 413 CAISLPLPREGGLPVGLMLMARAGQDQRLFAIAAAVEKLL 452
>gi|291434939|ref|ZP_06574329.1| amidase [Streptomyces ghanaensis ATCC 14672]
gi|291337834|gb|EFE64790.1| amidase [Streptomyces ghanaensis ATCC 14672]
Length = 434
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 185/385 (48%), Gaps = 28/385 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG A+KD+F V GH G GNP W R ++ A AV A+L GA G DE+A
Sbjct: 61 LSGSRVAVKDLFAVAGHAIGAGNPAWLREAPIESAHAAAVQALLQAGADVTGIARADELA 120
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y ++G N HYG P NP AP RVPGGSSSGSA AV L D LGTDT GSVRVP SYCG+
Sbjct: 121 YGLSGLNTHYGMPPNPAAPGRVPGGSSSGSASAVALGLADIGLGTDTAGSVRVPTSYCGL 180
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+ RPSH V G I +A SFDTV W P++L+RV VLL RP+Q I
Sbjct: 181 YSLRPSHGLVPDTGQIGLAPSFDTVSWITRTPQLLSRVSDVLLPR-------RPAQPI-- 231
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L L++ D V L + H + + VP + +E+
Sbjct: 232 -KRLLLATDLFDLVDPALRLPLHD--AAHAWADRL-------AVPLQPRSSTCAAHLEEW 281
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+ A+ +LQ E HG W+ T + + P +++ + A+ + +
Sbjct: 282 --------AEALGVLQAVEMWQLHGSWLQTHREAVSPLVADAIAAGEGMPAEYLAWARDT 333
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
++ R+ L+ L+ LV P P P + + R L+ A V+G ++
Sbjct: 334 VSQARSTLAELIPPGTALVQPAAPTAAPLPGPAVTGM-ALRTATVQLICAASVAGLPVLT 392
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFL 412
+P PV +SL+A GSD L
Sbjct: 393 LPGVQSPAGPVGLSLVATAGSDRAL 417
>gi|398794521|ref|ZP_10554568.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. YR343]
gi|398208526|gb|EJM95247.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. YR343]
Length = 447
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 188/418 (44%), Gaps = 45/418 (10%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
QP S+ LP+S IKD+FDV G VT G+ S AT+ A V + GA
Sbjct: 63 QPRSAIDGLPIS-----IKDLFDVAGEVTTAGS-RLLSNASVATANASIVDRLQLSGAAI 116
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTG 135
+GKT M E A++ G N HYGTP NP A R+PGGSSSG+AVAV + ++GTDTG
Sbjct: 117 VGKTNMSEFAFTGLGVNPHYGTPANPWQRAQQRIPGGSSSGAAVAVSDGMCLAAVGTDTG 176
Query: 136 GSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADD 195
GSVR+PA+ CG+ GF+PS S + G +P+A S D++G A D + L D
Sbjct: 177 GSVRIPAALCGLTGFKPSASRIDQRGTLPLAASLDSIGVIAHDVRS--------CWLLDS 228
Query: 196 VNLVRPSQVIFAEDCLQLSS----IPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKV 251
V +P ++ D LS IP RV GL + V + +
Sbjct: 229 VIAAQPLEI----DERNLSEAHFVIPQTRVLAGLDEHVSAAW-----------------L 267
Query: 252 PSLQHFLSEGNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
+L ++G K E + LA L + A + +E H + + P + R
Sbjct: 268 HALDVLRAQGVKITELPLQELAELDTINARGGITAWEAWQWHQQYAQSQSEAYDPQVLTR 327
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVF 367
+ + + ++ + + + + +++PTVP P L DP+
Sbjct: 328 IQRGSLLNEEDAAELYQLRADWKQRVEQAVAPFDGILMPTVPLIAPTLAELEDPARYMQV 387
Query: 368 RARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
S+ + C +S+P PV + L + HG+D LL+ + TLK
Sbjct: 388 NLLMLRNTSVINMLDGCSISLPCHQPGAAPVGLMLSSTHGNDAALLSWAAAIETTLKR 445
>gi|407769634|ref|ZP_11117008.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407287151|gb|EKF12633.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 426
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 187/407 (45%), Gaps = 29/407 (7%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+ SA LPL+G+ ++KD++D G VT + AAT + + + GA G
Sbjct: 46 AQSATDLPLAGMLVSVKDLYDEAG-VTTTAASKLLQGRPAATRDCEIIARIKAAGAVPFG 104
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
+T + E AYS G N HYGTP N P+ +PGGS+SG ++ V LVD +LGTDTGGSVR
Sbjct: 105 RTTLSEFAYSGVGLNPHYGTPGNVFDPEGIPGGSTSGGSLTVALGLVDIALGTDTGGSVR 164
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+P++ G++G++PS +S G+ P+A+SFDT G A D + V+
Sbjct: 165 IPSAINGLYGYKPSRLWMSGEGIHPLAKSFDTAGPLAGDLQTAIAAFEVMSGKTVPAQDG 224
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLF-GGHIIENVILGDYVKDKVPSLQHFL 258
+P+ + + DRV +KL GH + + LG ++ V + L
Sbjct: 225 KPAPIKIGVPAHAFVNDLDDRVRADFDAVCKKLANAGHQLIEIDLGFLAENAV--INKIL 282
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
+ YS Q ++ GD P + R+ A SA
Sbjct: 283 VAAEAHKIYS--------------QDFKALETCGD----------PRVLNRMRFADTLSA 318
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+ + +T++ A S+ + D +++ PT+P PK+ + + A S
Sbjct: 319 ADLIDAYAKRTDVIAMFSSAMADVDVMISPTLPMMAPKIAEVEADFDRLNAMMLRNTSYL 378
Query: 379 GVSGFCQVSIPLGLHDNL-PVAISLLAKHGSDGFLLNLVETLHNTLK 424
+S C +SIP+ D + P A+ + A HG D +L+ + L+
Sbjct: 379 NLSDACAISIPVPAGDGVAPGALMIAAPHGHDFAVLHAARRIDPLLR 425
>gi|298717184|ref|YP_003729826.1| amidase [Pantoea vagans C9-1]
gi|298361373|gb|ADI78154.1| amidase [Pantoea vagans C9-1]
Length = 443
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 183/403 (45%), Gaps = 35/403 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
+ GL +IKD+FDV G VT G+ A A + A V +L GA +GKT M E A
Sbjct: 64 IDGLPVSIKDLFDVQGEVTTAGSRLLADA-PVAVANASVVDKLLLAGAAIVGKTTMTEFA 122
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + R+PGGSSSG+AVAV + ++GTDTGGSVR+PA+ C
Sbjct: 123 FSGLGINPHYGTPVNPWQREQQRIPGGSSSGAAVAVAEGMCLGAVGTDTGGSVRIPAALC 182
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+P+ ++ G +P++ S D++G A D + + ++ D+ L+
Sbjct: 183 GLAGFKPTAERINQRGTLPLSTSLDSIGVIADDVRSCWLLDSIIADRPLDLQLLDLRNAR 242
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
FA +P RV GL + V + + I G V D
Sbjct: 243 FA--------VPQTRVLDGLDQHVAQAWQHAITLLKQAGATVID---------------- 278
Query: 266 EYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
++P L L++ A + YE H V P + R+ + Q
Sbjct: 279 -VTLPELDELNAMNARGGITAYEAWQWHKKTVQAQPEAYDPQVLARIQRGSHLTGQDAIE 337
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL--SIAGVS 381
+ + ++A L D L++PTVP P + A A L SI +
Sbjct: 338 LYQQRAAWQQRINAALSDFDALLMPTVPLVAPTIASLNDAQRYMEINASMLRNPSIINML 397
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL---VETLHN 421
C +S+P + PV +SL + HG D L++ VET N
Sbjct: 398 DGCALSLPCHRPGSAPVGLSLASIHGDDASLISWSLAVETALN 440
>gi|377807684|ref|YP_004978876.1| amidase [Burkholderia sp. YI23]
gi|357938881|gb|AET92438.1| amidase [Burkholderia sp. YI23]
Length = 447
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 190/395 (48%), Gaps = 31/395 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ ++KD+FDV G +T G+ AAT APA+ + + GA +G+T M E
Sbjct: 67 PLAGVPISVKDLFDVQGEITRAGSRIL--PEQAATRDAPAIGRLRAAGAVFVGRTNMTEF 124
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP R+PGGSSSG+AV+V + ++G+DTGGS R+PA+
Sbjct: 125 AYSGLGINPHYGTPANPFERHTARIPGGSSSGAAVSVTDGMAAAAIGSDTGGSCRIPAAL 184
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+P+ + + G +P++ S+D++G A + ++ A+ ++
Sbjct: 185 CGLAGFKPTAARIPLQGALPLSSSYDSIGSIAPSVACCASLDSIMAGEAEAASIAS---- 240
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLSEGNK 263
L+L ++P+ V + V F I G V++ S H + G
Sbjct: 241 -LPLTGLRL-AMPAHIVLDDMDAHVAATFERAIARLTAAGATVREVSFESWTHLATLG-- 296
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
Q + + A + + L++R+ D+ V + G E +R A + +
Sbjct: 297 -QHGGLVAAEAWAWHVGLIKRHA-----DDYDPRVIARIRLGSEHSTAEYLRNRALREQL 350
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL---SIAGV 380
C+ ELR + +V PTVP P++ D + A LL SIA +
Sbjct: 351 CRQADDELR--------PYDAIVCPTVPIVAPRIA-DLDDEPAYTAANRLLLRNPSIANM 401
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
C VSIP + + PV + L+ +H SD LL +
Sbjct: 402 LDLCAVSIPCHANGDAPVGLMLMGRHMSDRRLLAM 436
>gi|134293034|ref|YP_001116770.1| amidase [Burkholderia vietnamiensis G4]
gi|161521291|ref|YP_001584718.1| amidase [Burkholderia multivorans ATCC 17616]
gi|189352537|ref|YP_001948164.1| amidase [Burkholderia multivorans ATCC 17616]
gi|134136191|gb|ABO57305.1| Amidase [Burkholderia vietnamiensis G4]
gi|160345341|gb|ABX18426.1| Amidase [Burkholderia multivorans ATCC 17616]
gi|189336559|dbj|BAG45628.1| amidase [Burkholderia multivorans ATCC 17616]
Length = 457
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 189/401 (47%), Gaps = 29/401 (7%)
Query: 24 HQLP-LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
LP L+GL ++KD+FDV+G VT G+ R+ A A AV + GA +G+T
Sbjct: 64 RSLPALAGLPVSVKDLFDVEGSVTAAGSA-LLRSAPPANGDAAAVQRLREAGAIIVGRTN 122
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
M E AYS G N HYGTPTNP R+ GGSSSG+AVAV L SL TDTGGS+R+PA
Sbjct: 123 MSEFAYSGLGVNPHYGTPTNPVGAGRIAGGSSSGAAVAVARGLCAASLATDTGGSIRIPA 182
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CGI GF+P+ AVS GV+P+++S D+VG A + + V +VL D + +R
Sbjct: 183 ALCGIAGFKPTAQAVSRDGVLPLSRSLDSVGPIASTAECCSIVHQVLTGGEPDTSTLR-- 240
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLSEG 261
D L+L+ + +D + L V + F + G V+ P L + G
Sbjct: 241 -----LDTLRLAVV-TDYLLDELDPMVSRAFDRALALLTAAGASVETVAFPELNAIRAGG 294
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
Y+ +AA + + F H W+ + P + R+ A
Sbjct: 295 -----YNAKIVAA--------EAFAF---HRSWLASHAHLYDPRVHTRLLAGKDLPAADY 338
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL--SIAG 379
+ EL A L ++PTV PK+ FRA A L S+
Sbjct: 339 LDALDARAELINAARRRLAAFDAWLMPTVAIVAPKIGDLDDDNAFFRANAAMLRNPSVVN 398
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
+ C +++P+ + LP +S+ G+D +L + ++
Sbjct: 399 LLDGCALTLPIPSDNPLPQGLSVCGLGGADADVLAIGRSIE 439
>gi|381406410|ref|ZP_09931093.1| amidase [Pantoea sp. Sc1]
gi|380735712|gb|EIB96776.1| amidase [Pantoea sp. Sc1]
Length = 443
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 182/413 (44%), Gaps = 53/413 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ GL +IKD+FDV+G T G+ A + A V +L GA +GKT M E
Sbjct: 63 PIDGLPVSIKDLFDVEGEATRAGS-RLLADAPVAAANASVVDKLLLAGAAIVGKTTMTEF 121
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP + R+PGGSSSG+AVAV + ++GTDTGGSVR+PA+
Sbjct: 122 AFSGLGINPHYGTPVNPWQREQQRIPGGSSSGAAVAVAEGMCLAAVGTDTGGSVRIPAAL 181
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+P+ ++ G +P++ S D++G +ADDV
Sbjct: 182 CGLTGFKPTAKRINQRGTLPLSTSLDSIG-----------------VIADDVRSCWLLDS 224
Query: 205 IFAEDCLQLSS---------IPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQ 255
+ A+ L L S +P RV GL + V + + I G V D
Sbjct: 225 VIADRPLALQSLDVRNARFAVPQTRVLDGLDQHVAQAWQHAITLLKQAGAMVTD------ 278
Query: 256 HFLSEGNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
++P L L++ A + YE H P + R+
Sbjct: 279 -----------ITLPELDELNAMNARGGITAYEAWQWHKKSAQAHPEAYDPQVLVRIQRG 327
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFS 373
+ Q + + ++A LGD L++PTVP P + A A
Sbjct: 328 SHLTVQDATELYQQRAAWQQRINAALGDFDALLMPTVPLVAPTIASLSDAQRYMEINALM 387
Query: 374 LL--SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL---VETLHN 421
L SI + C +S+P + PV +SL + HG D L++ VET N
Sbjct: 388 LRNPSIINMLDGCALSLPCHQPGSAPVGLSLASTHGDDARLISWSLAVETALN 440
>gi|444377811|ref|ZP_21177019.1| hypothetical protein D515_1695 [Enterovibrio sp. AK16]
gi|443678182|gb|ELT84855.1| hypothetical protein D515_1695 [Enterovibrio sp. AK16]
Length = 384
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 180/385 (46%), Gaps = 38/385 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ + D + VTG G P WA H A + A V ++ G IGK +D+
Sbjct: 23 LARQRLVVSDNVGIQDMVTGIGIPAWADGHEPAKNDAHVVSTLMHSGCRLIGKAQVDDFG 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
SI+G N NP +P+ GGSSSG+A+AV +G D G V +PASYCG+
Sbjct: 83 TSISGLNPFLANLKNPVSPEARLGGSSSGAAIAVAKGKATIGIGNDCCGGVLIPASYCGL 142
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G+RPS V G+ P + SFD VG+ + R L Q+A+ +P +
Sbjct: 143 YGYRPSQGMVDLRGITPFSPSFDAVGF-------MTRHLPTLEQVAEKC-WTKPPRAGRL 194
Query: 208 EDCLQLSSIPSDRVT-QGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
++ + SS+ + ++ + L++ EKL I N +P+ LS+ Q
Sbjct: 195 KNIVNASSLFHELLSIEALLEWEEKLSKSKIFRN---------DMPN----LSKLTLTQA 241
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
++I S+ +L R E +G W+ KP E + + +R + K V
Sbjct: 242 HNIHSV--------ILGR-EIDLQYGQWLDVHKPKFSEETEEHL-KQIRGKSFKDFVETK 291
Query: 327 VKTELRA-ALSALLGDHGILVIPTVPGPPP-KLQMDPSALEVFRARAFSLLSIAGVSGFC 384
K E + +L G +L+IPT PG P ++ MD E F L +IA V+G
Sbjct: 292 KKREFFSDSLQGFFGSGEVLMIPTSPGQAPTEMFMD----ETFLINQRRLYAIAEVAGLA 347
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSD 409
Q+++PL + D P+ +SLLA G D
Sbjct: 348 QLTLPLLMVDGTPMGVSLLAHPGED 372
>gi|421625224|ref|ZP_16066079.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC098]
gi|408699405|gb|EKL44884.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC098]
Length = 369
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 186/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++ F
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTFTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ ++VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAHTTLEQVKQAEAVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|116694449|ref|YP_728660.1| glutamyl/aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
gi|113528948|emb|CAJ95295.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
Length = 447
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 199/415 (47%), Gaps = 51/415 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWART--HSAATSTAPAVLAVLSGGATSIGKTIMD 84
PL+G+ ++KD+FDV G VT G AR AA++ AP + + + GA +G+T M
Sbjct: 67 PLAGVPVSVKDLFDVQGDVTRAG----ARVLPERAASADAPVIARLRAAGAVFVGRTNMT 122
Query: 85 EMAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E AYS G N HYGTP NP R+PGGSSSG+AV+V + ++G+DTGGS R+PA
Sbjct: 123 EFAYSGVGINPHYGTPRNPYDRQAGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSCRIPA 182
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CGI GF+P+ V G +P++ S+D+VG A V V +A +V P+
Sbjct: 183 ALCGIAGFKPTARRVPLQGTVPLSPSYDSVGCLANTVACCAAVDAV---MAGEVPPAGPA 239
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+ L+L ++P+ V +G+ V ++F + G ++D +S +
Sbjct: 240 PLAG----LRL-AVPTGLVLEGMSDEVAEVFSRTLRRLSAAGALLQD--------VSFDS 286
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI--------SERVWEAV 314
+Q I + L +A E HG + P + +R + +
Sbjct: 287 WDQLAGIGANGGLVAA-------EASAWHGSLLAEQADRYDPRVLSRIRLADGQRAADYL 339
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
R ++ ++C+ EL A A +V+PTVP P++ D E F + L
Sbjct: 340 RMLQRRGELCRQADAEL-AGFDA-------VVLPTVPVVAPRIA-DLDDDEAFFSTNRLL 390
Query: 375 L---SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
L +IA + C +S+P + PV + L +H SD LL + + L+ E
Sbjct: 391 LRNPAIANMLDLCALSVPCHRPGDAPVGLMLFGRHLSDRRLLAIGMGIEGALRHE 445
>gi|264680283|ref|YP_003280193.1| amidase [Comamonas testosteroni CNB-2]
gi|262210799|gb|ACY34897.1| Amidase [Comamonas testosteroni CNB-2]
Length = 454
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 186/415 (44%), Gaps = 46/415 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL ++KD+FD+ GH T G + AT TA V + GA +G T M E
Sbjct: 69 PLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEF 127
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP NP D R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 128 AYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVSDGMALAAIGSDTGGSVRIPS 187
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+ GF+P+ VS GV+P++ + D++G A PS
Sbjct: 188 ALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLA------------------------PS 223
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS--- 259
A LS P + ++ + L + NV++ + QH LS
Sbjct: 224 VRCCAALDAVLSGEPHGELRAASLQGLRLL----VPTNVVMDGMDSAVAAAWQHALSLLY 279
Query: 260 -EGNKEQEYSIPSLAALSS-----AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
G + E +P + L+ + + + +H D + + P + R+
Sbjct: 280 AAGVQITEAVVPPFSELAQINAKGGFTAAEAWAWHRSHIDGAGRLA-EYDPRVGTRILRG 338
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFS 373
SA + + + A + A + DH ++++PTVP PK+ ++ E + A
Sbjct: 339 KDISAADYIELLARRQQWIARVQAQMADHDLMLMPTVPVIAPKIAELQASDEAYFAANGL 398
Query: 374 LLSIAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+L + F C VS+P PV +SL G D LL++ + L +
Sbjct: 399 MLRNPTLINFLDGCAVSLPCHRAGEAPVGLSLAGLAGQDQRLLSVALAVEALLAQ 453
>gi|239504016|ref|ZP_04663326.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB900]
gi|421679486|ref|ZP_16119358.1| amidase [Acinetobacter baumannii OIFC111]
gi|410391138|gb|EKP43514.1| amidase [Acinetobacter baumannii OIFC111]
Length = 369
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 186/386 (48%), Gaps = 47/386 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTLTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFL 412
S+PL + LPV + +++KH DG L
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDGQL 357
>gi|421655592|ref|ZP_16095913.1| amidase [Acinetobacter baumannii Naval-72]
gi|408507897|gb|EKK09585.1| amidase [Acinetobacter baumannii Naval-72]
Length = 369
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 189/384 (49%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L ++ +D V + ++++K ++E V +HF
Sbjct: 187 LALLNVKTDEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A +T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAQTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|147767325|emb|CAN68995.1| hypothetical protein VITISV_008861 [Vitis vinifera]
Length = 503
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 97/129 (75%), Gaps = 4/129 (3%)
Query: 7 DYGAFMEKFVLQPSSSAHQLPL----SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D+GAF+++ L P + L+FA+ D+FD++G+VTGFGNPDWARTH A+
Sbjct: 33 DFGAFVQRLQLLPPPQPAPPKAPHPLTNLSFAVSDVFDIEGYVTGFGNPDWARTHDTASR 92
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVG 122
T+P V A++ GGAT GKT++DEMAYSINGENKHYGTPTNP AP R+PGGSSSG+AVAV
Sbjct: 93 TSPVVSALVEGGATCTGKTVVDEMAYSINGENKHYGTPTNPAAPSRIPGGSSSGAAVAVA 152
Query: 123 AKLVDFSLG 131
A VDFSL
Sbjct: 153 ANFVDFSLA 161
>gi|184158296|ref|YP_001846635.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ACICU]
gi|332875666|ref|ZP_08443477.1| Amidase [Acinetobacter baumannii 6014059]
gi|384132404|ref|YP_005515016.1| Glu-tRNA amidotransferase [Acinetobacter baumannii 1656-2]
gi|384143403|ref|YP_005526113.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii MDR-ZJ06]
gi|385237733|ref|YP_005799072.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii TCDC-AB0715]
gi|387123750|ref|YP_006289632.1| amidase [Acinetobacter baumannii MDR-TJ]
gi|407933002|ref|YP_006848645.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii TYTH-1]
gi|416148268|ref|ZP_11602259.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AB210]
gi|417568395|ref|ZP_12219258.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC189]
gi|417577859|ref|ZP_12228696.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-17]
gi|417871639|ref|ZP_12516569.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH1]
gi|417873616|ref|ZP_12518483.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH2]
gi|417878107|ref|ZP_12522739.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH3]
gi|417883870|ref|ZP_12528080.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH4]
gi|421204226|ref|ZP_15661355.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC12]
gi|421534365|ref|ZP_15980638.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC30]
gi|421629130|ref|ZP_16069873.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC180]
gi|421688851|ref|ZP_16128546.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-143]
gi|421703775|ref|ZP_16143232.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1122]
gi|421707558|ref|ZP_16146950.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1219]
gi|421790568|ref|ZP_16226769.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-2]
gi|424052179|ref|ZP_17789711.1| hypothetical protein W9G_00868 [Acinetobacter baumannii Ab11111]
gi|424063678|ref|ZP_17801163.1| hypothetical protein W9M_00961 [Acinetobacter baumannii Ab44444]
gi|425752895|ref|ZP_18870794.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-113]
gi|445474976|ref|ZP_21453232.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-78]
gi|183209890|gb|ACC57288.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ACICU]
gi|322508624|gb|ADX04078.1| Glu-tRNA amidotransferase [Acinetobacter baumannii 1656-2]
gi|323518233|gb|ADX92614.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii TCDC-AB0715]
gi|332736144|gb|EGJ67160.1| Amidase [Acinetobacter baumannii 6014059]
gi|333365041|gb|EGK47055.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AB210]
gi|342224815|gb|EGT89831.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH1]
gi|342230814|gb|EGT95638.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH2]
gi|342233699|gb|EGT98411.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH3]
gi|342234968|gb|EGT99597.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH4]
gi|347593896|gb|AEP06617.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii MDR-ZJ06]
gi|385878242|gb|AFI95337.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acinetobacter baumannii MDR-TJ]
gi|395554690|gb|EJG20692.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC189]
gi|395568556|gb|EJG29226.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-17]
gi|398326386|gb|EJN42535.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC12]
gi|404559690|gb|EKA64942.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-143]
gi|404671629|gb|EKB39471.1| hypothetical protein W9G_00868 [Acinetobacter baumannii Ab11111]
gi|404674036|gb|EKB41801.1| hypothetical protein W9M_00961 [Acinetobacter baumannii Ab44444]
gi|407191596|gb|EKE62792.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1122]
gi|407191939|gb|EKE63127.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1219]
gi|407901583|gb|AFU38414.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii TYTH-1]
gi|408703273|gb|EKL48672.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC180]
gi|409987570|gb|EKO43750.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC30]
gi|410405628|gb|EKP57664.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-2]
gi|425498545|gb|EKU64619.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-113]
gi|444779577|gb|ELX03559.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-78]
Length = 369
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 189/384 (49%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L ++ +D V + ++++K ++E V +HF
Sbjct: 187 LALLNVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A +T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAQTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|445474084|ref|ZP_21453129.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC338]
gi|444768353|gb|ELW92569.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC338]
Length = 369
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 189/384 (49%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L ++ +D V + ++++K ++E V +HF
Sbjct: 187 LALLNVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A +T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAQTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|374577275|ref|ZP_09650371.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
gi|374425596|gb|EHR05129.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
Length = 478
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
+LPL GL F++KD DV G T P++A T A T+P V ++ GA +GKT MD
Sbjct: 83 ELPLYGLVFSVKDCIDVAGEQTTSACPEFAYT---AKDTSPVVADAIAAGAIYLGKTNMD 139
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
+ A + G YG NP PD +PGGSSSG+AV+V F+ GTDTGGS RVPASY
Sbjct: 140 QFATGLVGVRSPYGIARNPHNPDYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASY 199
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 191
CG+ GF+P+ A S G++ +SFDTV + DP+ + V RVL +
Sbjct: 200 CGVTGFKPAPGAFSQRGMVYACRSFDTVSLYTRDPRDGHDVYRVLAR 246
>gi|421664600|ref|ZP_16104738.1| amidase [Acinetobacter baumannii OIFC110]
gi|421696747|ref|ZP_16136328.1| amidase [Acinetobacter baumannii WC-692]
gi|404560820|gb|EKA66058.1| amidase [Acinetobacter baumannii WC-692]
gi|408712104|gb|EKL57292.1| amidase [Acinetobacter baumannii OIFC110]
Length = 369
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 189/384 (49%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L ++ +D V + ++++K ++E V +HF
Sbjct: 187 LALLNVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + V+T
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAATTLEQVKQAEVVRT 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|377563803|ref|ZP_09793134.1| putative amidase [Gordonia sputi NBRC 100414]
gi|377529017|dbj|GAB38299.1| putative amidase [Gordonia sputi NBRC 100414]
Length = 487
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G T A+KD+F V G TG G P + ++ AT A AV +L+ GA G D+
Sbjct: 136 PLTGTTVAVKDVFAVAGFATGGGVPAYEQSAPIATEHATAVARLLNSGAHIRGIARTDQF 195
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS+ G+N H+GTP N P +PGGSSSG A AV D L TDT GS+R PASY G
Sbjct: 196 AYSMAGDNPHHGTPPNAAVPAALPGGSSSGPASAVAHGDADLGLATDTAGSIRTPASYQG 255
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--------------- 191
++G R +H +VST G++P+A FD +G + DP IL LL
Sbjct: 256 LWGLRSTHGSVSTRGLLPLAPDFDAIGLLSRDPDILALATTTLLDDPSTTAIGSGVATLD 315
Query: 192 --LADDVNLVRPSQVIFAEDCLQLSSIPSDRVT 222
DDV L R ++ Q S+ D +T
Sbjct: 316 DIHVDDVELARLAEAFRVHQAFQAWSVHGDWIT 348
>gi|403675209|ref|ZP_10937390.1| Glu-tRNA amidotransferase [Acinetobacter sp. NCTC 10304]
Length = 369
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 185/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTLTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A +T+ +++ + VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAQTTLEQVKQAEVVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTEELDALLEKYDALVLPTLPRIPPKVSEAENTVTFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|398886529|ref|ZP_10641403.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM60]
gi|398189439|gb|EJM76714.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM60]
Length = 390
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 187/406 (46%), Gaps = 54/406 (13%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G AIKD D+ GH T G+ +A A A V A+L G +GKT M E+A+
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFAEAEPA-LRNADVVDAILDAGWQIVGKTNMHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CGI G
Sbjct: 73 VTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P++ VS G P+A S D VG FA AD +L+ QVI
Sbjct: 133 LKPTYGRVSRVGAHPLASSLDCVGPFA----------------ADMADLIAAMQVI---- 172
Query: 210 C--LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
C Q+ +PS + G ++ D P LQ L +
Sbjct: 173 CPGFQVQGLPSGNASVGFLEV--------------------DCEPHLQACLGAAADRAGW 212
Query: 268 SIPSL------AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
L AA ++ + ++ F+N T K +G + +R+ A RTSA +
Sbjct: 213 RRSQLHLSDFEAAFAAGLTVIN---FENWAAFGHLTGKGLIGADVEQRLLAASRTSAADL 269
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ V+ + A L D +L++PT+P PP L SA + A L+ +S
Sbjct: 270 AQAEKVRARFSQQVDAALEDFAVLLLPTMPSLPPTLVEARSASKAV-AGMTPLVRPFNLS 328
Query: 382 GFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
G +++P+ L L V + ++ + G D + L ++ E
Sbjct: 329 GHPALTVPVELEGSGLKVGLQIVGRKGQDELVCAFGAQLQQSMAGE 374
>gi|15806394|ref|NP_295100.1| amidase [Deinococcus radiodurans R1]
gi|6459130|gb|AAF10946.1|AE001983_7 amidase, putative [Deinococcus radiodurans R1]
Length = 394
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 187/417 (44%), Gaps = 84/417 (20%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSG---- 73
QP + PL+GLTF++KD++ G P W T S +VL G
Sbjct: 25 QPLQTHDAGPLAGLTFSVKDLY---------GVPGWPLTASTRAPVPDPGASVLVGRLLE 75
Query: 74 -GATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGT 132
GA ++GKT + E+A I G N + GT T+P P+RVPGGSSSG+AV+V VDF+LGT
Sbjct: 76 LGAAALGKTHLHEVALGITGMNGYGGT-THPRDPERVPGGSSSGAAVSVALGQVDFALGT 134
Query: 133 DTGGSVRVPASYCGIFGFRPS--HSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
DTGGS+RVPA++C + G++P+ H A ST GV+P++ + D G
Sbjct: 135 DTGGSIRVPAAWCSVVGYKPTKGHPAWSTEGVLPLSWTCDHAG----------------- 177
Query: 191 QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII----ENVILG-- 244
LA D+++V V+ + L GGH+ ++V +G
Sbjct: 178 PLARDLSMV--------------------------VRVYQALGGGHVTPQDWQDVRVGLW 211
Query: 245 -------DYVKDKVPSLQHFL-SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+ V+D V + L + G +P + S + L E H + +
Sbjct: 212 LPEGWTDETVRDAVLAYADDLKARGATVTPVDLPEMLDAYSPIVL---SEAARVHAEALQ 268
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
P P + S +++ +TE R L LL + +L+ P VP PPP
Sbjct: 269 QPDPGFLPFTLMSLRNGAALSEEEVQAAHERRTEYRVLLDRLLAEFDVLLAPAVPTPPPL 328
Query: 357 LQMDPSAL----EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
+ D L +V R L + + G +S+P + D V + L+ +HG D
Sbjct: 329 IGQDEVTLLEGPQVLRRAVLRLNTPFSLLGAPVLSLPSSVPD---VGVQLVGRHGQD 382
>gi|163856545|ref|YP_001630843.1| amidase [Bordetella petrii DSM 12804]
gi|163260273|emb|CAP42575.1| putative amidase [Bordetella petrii]
Length = 451
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 191/405 (47%), Gaps = 34/405 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDE 85
P+ GL +IKD+FDV G T G+ AR AA A V +L+ GA IG+T M E
Sbjct: 68 PIDGLPVSIKDLFDVAGETTLAGSV--ARQGEPAADEHAVVVQRLLAAGAVIIGRTNMVE 125
Query: 86 MAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 126 FAYSGLGINPHYGTPLNPWDRATGRIPGGSSSGAAVSVTDGMALGAIGSDTGGSVRIPAA 185
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CG+ GF+PS VS AGV+P++ S D++G A + + +L D+V +P++
Sbjct: 186 LCGLAGFKPSAWRVSMAGVLPLSTSLDSIGPLAPTVRCCATLDAIL--AGDEVAEWQPAE 243
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ D L+L ++P+ G+ V + F +L + G +
Sbjct: 244 L----DGLRL-AVPTTLALDGMDAHVSQAFAD-----------------ALSRLSAAGAR 281
Query: 264 EQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+E +P A L++ A E H D + P + R+ SA
Sbjct: 282 IEEIEVPEFAQLAAINAKGGFTASEAWGWHRDLIARKADRYDPRVVSRIRRGQEMSAADY 341
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ AA+ + + L++PTVP P + ++ + + A +L +
Sbjct: 342 LDLLDAREAWVAAVEHRIARYDALLLPTVPVAAPTVAEVTASDDAYYAANGLILRNPTLI 401
Query: 382 GF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F C S+P + P + + +G+D +L++ + + L
Sbjct: 402 NFLDGCAASVPCHSPGSAPAGLMVAGANGADRRILSISMAIEDLL 446
>gi|417546521|ref|ZP_12197607.1| amidase [Acinetobacter baumannii OIFC032]
gi|421666831|ref|ZP_16106915.1| amidase [Acinetobacter baumannii OIFC087]
gi|421672202|ref|ZP_16112164.1| amidase [Acinetobacter baumannii OIFC099]
gi|400384409|gb|EJP43087.1| amidase [Acinetobacter baumannii OIFC032]
gi|410380110|gb|EKP32701.1| amidase [Acinetobacter baumannii OIFC099]
gi|410386810|gb|EKP39276.1| amidase [Acinetobacter baumannii OIFC087]
Length = 369
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 188/384 (48%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A + +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVIKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L ++ +D V + ++++K ++E V +HF
Sbjct: 187 LALLNVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|445407381|ref|ZP_21432304.1| amidase [Acinetobacter baumannii Naval-57]
gi|444780975|gb|ELX04899.1| amidase [Acinetobacter baumannii Naval-57]
Length = 369
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 185/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTLTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQTLQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A +T+ +++ + VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAQTTLEQVKQAEVVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|260550278|ref|ZP_05824490.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. RUH2624]
gi|424055457|ref|ZP_17792980.1| hypothetical protein W9I_01856 [Acinetobacter nosocomialis Ab22222]
gi|425739900|ref|ZP_18858081.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-487]
gi|260406590|gb|EEX00071.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. RUH2624]
gi|407438652|gb|EKF45195.1| hypothetical protein W9I_01856 [Acinetobacter nosocomialis Ab22222]
gi|425495718|gb|EKU61891.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-487]
Length = 369
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 187/384 (48%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHTFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAEYTHTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L + +D + + ++++K ++E V +HF
Sbjct: 187 LALLDVKADEIVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + L++PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTQELDALLDKYDALILPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|262279246|ref|ZP_06057031.1| Glu-tRNA amidotransferase [Acinetobacter calcoaceticus RUH2202]
gi|262259597|gb|EEY78330.1| Glu-tRNA amidotransferase [Acinetobacter calcoaceticus RUH2202]
Length = 369
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 188/387 (48%), Gaps = 39/387 (10%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L I KT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLDVEPAQYD-AEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA A+ AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAIAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++ A
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPS--FKPAECTSAPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L D + + ++++K E V +HF
Sbjct: 188 AVLDVKADDVIWNCIHQALQKANLQTTSEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +GP ++ R+ +A T+ +++ + VK +
Sbjct: 222 -DAAYDAGMQII-NYENWQAFGELTKTGL--IGPDVNNRLLKAAETTLEQVKQAEVVKQQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPL 390
L L ALL + L++PT+P PPK+ + + A L+ +SG +S+PL
Sbjct: 278 LTQELDALLEKYDALILPTLPQIPPKVAEAENTVAFLNLTA--LVRPFNLSGHPAISVPL 335
Query: 391 GLHDNLPVAISLLAKHGSDGFLLNLVE 417
+ LPV + +++KH +D L +V+
Sbjct: 336 ETSEGLPVGLQIVSKHQNDEKLCAIVK 362
>gi|320450505|ref|YP_004202601.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermus scotoductus
SA-01]
gi|320150674|gb|ADW22052.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Thermus scotoductus
SA-01]
Length = 471
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 196/442 (44%), Gaps = 52/442 (11%)
Query: 3 SRDSDYGAFM---EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA 59
S D GAF+ E + + S LPL+GL A+KD G T G+
Sbjct: 30 SLDPSLGAFLTVNEGVLEEARSLDPTLPLAGLVVAVKDNIVTKGIPTTAGSRLLEGFLPP 89
Query: 60 ATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAV 119
+TA A L L GA IGKT +DE + E+ + NP P RVPGGSS GSAV
Sbjct: 90 YEATAVARLKAL--GALVIGKTNLDEFGMGSSTEHSAFFPSRNPFDPTRVPGGSSGGSAV 147
Query: 120 AVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP 179
AV A L +LG+DTGGSVR PA++CGI+G +P++ VS G+I A S D +G A
Sbjct: 148 AVAADLAPLALGSDTGGSVRQPAAFCGIYGLKPTYGRVSRYGLIAYASSLDQIGPMA--- 204
Query: 180 KILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE 239
R R L L D ++ P D L P R + L + + L G ++
Sbjct: 205 ----RSVRDLALLMDAISGPDPL------DATSLDLKP--RFQEALAELLPSLRLG-VVR 251
Query: 240 NVILGDY--VKDKV-PSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+ G+ V+ + +L+ F G + +E S PSL +A +L E +N +
Sbjct: 252 EALSGNSPGVEGALRQALEVFRGLGLQVKEVSWPSLPLALNAYYILAPAEASSNLARYDG 311
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDV------------------------CQSVKTELR 332
T+ G E +W + + + + Q+ + L+
Sbjct: 312 TLFGYRAEG--EELWRVLEETRARFGLEVKRRILVGTFVLSSGYYEAYYGRAQAFRGRLK 369
Query: 333 AALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGL 392
A AL + +L++PT P P L P L ++R +++ A ++G +S P G
Sbjct: 370 AEAQALFQEVDLLLLPTTPHPAFPLGGRPDPLAMYREDLYTV--GANLAGLPALSFPAGF 427
Query: 393 HDNLPVAISLLAKHGSDGFLLN 414
D LPV + L A D LL
Sbjct: 428 EDGLPVGLQLFAPWARDELLLQ 449
>gi|418532785|ref|ZP_13098682.1| amidase [Comamonas testosteroni ATCC 11996]
gi|371450111|gb|EHN63166.1| amidase [Comamonas testosteroni ATCC 11996]
Length = 454
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 186/413 (45%), Gaps = 46/413 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL ++KD+FD+ GH T G + AT TA V + GA +G T M E
Sbjct: 69 PLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEF 127
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP NP D R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 128 AYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVRIPS 187
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL-------LQLA-- 193
+ CG+ GF+P+ VS GV+P++ + D++G A + + VL L+ A
Sbjct: 188 ALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLAPSVRCCAALDAVLSGQSHGELRAASL 247
Query: 194 DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS 253
+ L+ P+ V+ D + + + ++ V + + V
Sbjct: 248 QGLRLLAPTNVVL------------DGMDSAVAAAWQRALSLLYAAGVQITEAVVQPFSE 295
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
L S+G + + + +H D + + P + R+
Sbjct: 296 LAQINSKGG----------------FTAAEAWAWHRSHIDGAGRLA-EYDPRVGTRILRG 338
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFS 373
SA +++ + A + A + DH ++++PTVP PK+ ++ E + A
Sbjct: 339 KDISAADYIELLALRQQWIARVQAQMADHDLMLMPTVPVIAPKIAELQASDEAYFAANGL 398
Query: 374 LLSIAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+L + F C VS+P PV +SL G D LL++ + + L
Sbjct: 399 MLRNPTLINFLDGCAVSLPCHRAGEAPVGLSLAGTAGQDQRLLSVALAVEDLL 451
>gi|417549156|ref|ZP_12200236.1| amidase [Acinetobacter baumannii Naval-18]
gi|417565340|ref|ZP_12216214.1| amidase [Acinetobacter baumannii OIFC143]
gi|421676025|ref|ZP_16115943.1| amidase [Acinetobacter baumannii OIFC065]
gi|421693108|ref|ZP_16132753.1| amidase [Acinetobacter baumannii IS-116]
gi|395557096|gb|EJG23097.1| amidase [Acinetobacter baumannii OIFC143]
gi|400387124|gb|EJP50197.1| amidase [Acinetobacter baumannii Naval-18]
gi|404558794|gb|EKA64071.1| amidase [Acinetobacter baumannii IS-116]
gi|410380985|gb|EKP33560.1| amidase [Acinetobacter baumannii OIFC065]
Length = 369
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 189/384 (49%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L ++ +D V + ++++K ++E V +HF
Sbjct: 187 LALLNVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A +T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAQTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|70606696|ref|YP_255566.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius DSM 639]
gi|449066919|ref|YP_007434001.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius N8]
gi|449069191|ref|YP_007436272.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius Ron12/I]
gi|68567344|gb|AAY80273.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius DSM 639]
gi|449035427|gb|AGE70853.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius N8]
gi|449037699|gb|AGE73124.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius Ron12/I]
Length = 395
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 175/400 (43%), Gaps = 48/400 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LS L F+IKDI D+ G T G+ + A V +L G IGKT E A
Sbjct: 27 LSNLKFSIKDIIDIKGVPTTAGS--RILNDYIPDTNAYVVEKILEEGGEIIGKTNTHEFA 84
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ +G NP +R+ GGSS G+AV+V LVD +GTDTGGSVR+PA+ CG+
Sbjct: 85 MGATNTSSIFGPAKNPYDIERISGGSSGGAAVSVALGLVDVGVGTDTGGSVRIPAALCGV 144
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV-------R 200
GF+PS + T G+IP + S DTVG+ D + LNRV V L D LV R
Sbjct: 145 IGFKPSIGLIPTDGIIPFSWSIDTVGFIVKDMQTLNRVLEV--TLTDKTVLVSQIRRRPR 202
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
+F +D + R + +V ++ F I N IL Y
Sbjct: 203 VGLFLFGDDEVS-------RALKPVVDTLNNYFDIKEIHNEILEKY-------------S 242
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT-SAQ 319
G+ ++ +P + Y + H W K D P + + + +
Sbjct: 243 GDIRRKIVLP------------EAYSY---HRKWFKERKDDYFPDVRRLLENGSKILGYE 287
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
+D +S +R + + D +L+ PT PK+ FR + S I
Sbjct: 288 YVDALRSRHVLIREYMK-IFSDVDVLISPTTKVVAPKISEVIGNELTFREKLVSNTEIFN 346
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
V+G +SIP+ + LPV + + + DG +L++ + +
Sbjct: 347 VTGAPSISIPVAQLNGLPVGLMVSGELYQDGTVLDIAKRI 386
>gi|421807819|ref|ZP_16243677.1| amidase [Acinetobacter baumannii OIFC035]
gi|410416390|gb|EKP68164.1| amidase [Acinetobacter baumannii OIFC035]
Length = 369
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 185/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTLTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + V+T+
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAATTLEQVKQAEVVRTQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|407787573|ref|ZP_11134713.1| putative amidase [Celeribacter baekdonensis B30]
gi|407199273|gb|EKE69293.1| putative amidase [Celeribacter baekdonensis B30]
Length = 386
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 185/391 (47%), Gaps = 46/391 (11%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G T IKD D+ G VTG G+ +A + + A A V A+L+ G IGK M E+A+
Sbjct: 20 TGPTVVIKDCIDIAGTVTGCGSEAFA-SAAPALENAVVVDALLTAGCRIIGKANMHELAF 78
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N +GTP NP PDR+PGGSSSGSA AV + L DF++GTDTGGSVR PA CG+
Sbjct: 79 GMTGVNGFHGTPVNPNWPDRIPGGSSSGSAAAVASGLCDFAIGTDTGGSVRQPAICCGVI 138
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P+ +S G+ P S D VG FA D ++ +A P ++ A
Sbjct: 139 GIKPTFGRISRKGLSPKNSSLDCVGAFARDMDMIETA------MAAMDPTFTPETLVNAP 192
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
++ S P V LV ++ + G E L HF
Sbjct: 193 KLTRIKSDPVAEVGDPLVYALMDAYPGMGYE-------------CLPHF----------- 228
Query: 269 IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
AA + M ++ YE G + P LG I +R+ A + ++ ++V+
Sbjct: 229 ---EAAFQAGMTVIS-YETAAAFGHLLDEGAP-LGADIHKRLTAARHVTEAQLAEAEAVR 283
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQ--MDP-SALEVFR-ARAFSLLSIAGVSGFC 384
T A + ALL + LV P +P PP L DP + L + R R F+L SG
Sbjct: 284 TAFTAEVDALLEQYDALVTPALPVIPPTLSEAQDPQTILPLTRFLRPFNL------SGHP 337
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+++P + LP+ + L+ + G + L +
Sbjct: 338 AITLPARTNSGLPIGLQLVGRKGEEARLCAI 368
>gi|260554862|ref|ZP_05827083.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|260411404|gb|EEX04701.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|452947711|gb|EME53198.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii MSP4-16]
Length = 369
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 186/380 (48%), Gaps = 49/380 (12%)
Query: 35 IKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGEN 94
+KD D+ G T G+ A A V +L IGKT + E+A+ I G N
Sbjct: 19 VKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGITGIN 77
Query: 95 KHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSH 154
+GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG +P+
Sbjct: 78 HAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGLKPTF 137
Query: 155 SAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLS 214
VS GV P + S D VG FA +++ + +Q+ D +P++ L L
Sbjct: 138 GRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK-LALL 190
Query: 215 SIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLA 273
++ +D V + ++++K ++E V +HF A
Sbjct: 191 NVKADEVVWNCIYQALQKANLETVLEKV-------------EHF--------------EA 223
Query: 274 ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRA 333
A + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK +L
Sbjct: 224 AYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQ 280
Query: 334 ALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQVSIP 389
L ALL + LV+PT+P PPK+ + + R F+L SG +S+P
Sbjct: 281 ELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAISVP 334
Query: 390 LGLHDNLPVAISLLAKHGSD 409
L + LPV + ++KH D
Sbjct: 335 LETSEGLPVGLQFVSKHQKD 354
>gi|402757984|ref|ZP_10860240.1| Glu-tRNA amidotransferase [Acinetobacter sp. NCTC 7422]
Length = 370
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 191/389 (49%), Gaps = 50/389 (12%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
L +KD D+ G T G+ ++ AAT A V +L+ KT + E+A+
Sbjct: 14 ALKVMVKDSIDIQGMQTMAGSKALMQSQ-AATRNAAVVDRILAADCQITAKTNLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
I G N +GT NP P+ +PGGSSSGSA AV A L DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 73 ITGINHVFGTAVNPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ VS AGV P S D VG F A+ ++++ + I
Sbjct: 133 LKPTFGRVSRAGVHPATSSLDCVGPF-----------------ANSIDMIETAMQIIDPT 175
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ-EYS 268
Q S +TQ KL + + + + +QH+L++ + +
Sbjct: 176 FHQ-----STELTQA-----PKLAWLDVQADSTVAE-------CIQHYLAQADLHPIHVT 218
Query: 269 IPSL-AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+ S AA + M+++ YE +G+ T LG ++ R+ +A T+ +++ + V
Sbjct: 219 VKSFDAAFDAGMQII-NYENWQAYGELTQTGL--LGTDVNARLLKAAATTLAQVEQAEQV 275
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGF 383
K A + ALL + L++PT+P PPK+ + + R F+L SG
Sbjct: 276 KASFTAEIDALLDQYDALILPTLPQLPPKVAEAENTVAFLNLTGLVRPFNL------SGH 329
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFL 412
+SIPL ++ LPV + ++AKH +D +L
Sbjct: 330 PAISIPLQTNEGLPVGLQIVAKHNADEYL 358
>gi|421650552|ref|ZP_16090928.1| amidase [Acinetobacter baumannii OIFC0162]
gi|425750793|ref|ZP_18868748.1| amidase [Acinetobacter baumannii WC-348]
gi|445459234|ref|ZP_21447505.1| amidase [Acinetobacter baumannii OIFC047]
gi|408510187|gb|EKK11850.1| amidase [Acinetobacter baumannii OIFC0162]
gi|425485250|gb|EKU51647.1| amidase [Acinetobacter baumannii WC-348]
gi|444774445|gb|ELW98529.1| amidase [Acinetobacter baumannii OIFC047]
Length = 369
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 184/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS G+ P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGIYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTLTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|420249771|ref|ZP_14753009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398063480|gb|EJL55210.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 473
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 184/414 (44%), Gaps = 48/414 (11%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
Q L GL IKD+ D +G T +G+ A T A V A++ GA IGKT
Sbjct: 75 RQRLLEGLPIGIKDLIDTNGIETRYGSA--AYVGHVPTVDADVVKALVDQGAIIIGKTTT 132
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
E A+ ++ + +G NP R+PGGSS G+AVA+ + V +GTDTGGSVR+PA+
Sbjct: 133 HEFAWGVSTASAKFGDTLNPLDSTRIPGGSSGGAAVAIASGAVRAGVGTDTGGSVRIPAA 192
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP-S 202
CG+ GF+P+H +ST GV P+A + D VG + ++ +G LAD + P S
Sbjct: 193 LCGVVGFKPTHGTISTRGVFPLAPTCDHVGLLG---EQVDDIG----ILADAFGIDLPES 245
Query: 203 QVIFAEDCLQLSSIPSDRVT-------QGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQ 255
+ + IP ++ G ++ +E++F ++ L D V + S+
Sbjct: 246 DAWISARLGVVREIPPVPLSPEMAAAFDGAIERLEQVFACDEVDTSRLFDTVYESFASI- 304
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
L EG E QR DW + P ER+ A
Sbjct: 305 -VLIEGGIEH----------------FQR-------SDW-DRIARHYSPETVERLRRAEA 339
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL----EVFRARA 371
+ Q + E A L + LV+PT P P++ + R
Sbjct: 340 MDLRAYISAQQSRREFAARLHKAMSTVDYLVLPTCPCTAPRVDAGSVTIGDWSGTVREAL 399
Query: 372 FSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ + V+GF +SIPL D+ LP A+ ++AK G DG LL + + + L+
Sbjct: 400 MTYTAPFNVTGFPAISIPLPRGDSELPTALQIVAKPGDDGALLQIAQQMELMLQ 453
>gi|445488017|ref|ZP_21458065.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii AA-014]
gi|444767986|gb|ELW92215.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii AA-014]
Length = 369
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 186/384 (48%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTHTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L + +D V + ++++K ++E V +HF
Sbjct: 187 LALLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + ++KH D
Sbjct: 331 ISVPLETSEGLPVGLQFVSKHQKD 354
>gi|335036808|ref|ZP_08530127.1| hypothetical protein AGRO_4135 [Agrobacterium sp. ATCC 31749]
gi|333791789|gb|EGL63167.1| hypothetical protein AGRO_4135 [Agrobacterium sp. ATCC 31749]
Length = 453
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 182/417 (43%), Gaps = 53/417 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ + + A+ A V A+ G SIG+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGMPTTAGSKILS-DDAPASRDADVVAALKQAGMVSIGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ V V A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------W-DPKILNRVGRVLLQLA-DDV 196
G+ G++ S S GV P+A+S D++G W D + R L ++ V
Sbjct: 189 GVVGYKASRGRYSMHGVYPLAKSLDSLGPLTLTVQDAVWVDAAMRGRTAADLARMPLSGV 248
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
+LV P V+F D + G+ + E+ +++
Sbjct: 249 SLVVPETVVF------------DGIEPGVAAAFEQ---------------------AVER 275
Query: 257 FLSEGNKEQEYSIPSLAALSSAMR----LLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
+ G + + P + L +R L+ F + + P + R
Sbjct: 276 LVRAGASVRRQAFPVFSELFDLIREKGALVTAEAFSLHKARLEGADAARMDPRVVVRTRL 335
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRA 369
S + + AA SA++G IL+ PT+P K L + A A
Sbjct: 336 GANISMPDYIAIIEARDRMTAAFSAMIGRDEILISPTLPHVAAKVAPLVENDDAFFAMNA 395
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+ I C VSIP G + +PV + L HG+D LL + +++
Sbjct: 396 KTLRNTQIGNFLDHCGVSIPCGTGEAGMPVGLLLSGLHGTDDRLLGVAMAAEEIIRD 452
>gi|169795798|ref|YP_001713591.1| amidase [Acinetobacter baumannii AYE]
gi|213157510|ref|YP_002319555.1| Glu-tRNA amidotransferase [Acinetobacter baumannii AB0057]
gi|215483284|ref|YP_002325491.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB307-0294]
gi|301346133|ref|ZP_07226874.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB056]
gi|301511349|ref|ZP_07236586.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB058]
gi|301597072|ref|ZP_07242080.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB059]
gi|332855507|ref|ZP_08435913.1| Amidase [Acinetobacter baumannii 6013150]
gi|332870331|ref|ZP_08439166.1| Amidase [Acinetobacter baumannii 6013113]
gi|417574089|ref|ZP_12224943.1| amidase [Acinetobacter baumannii Canada BC-5]
gi|421620457|ref|ZP_16061393.1| amidase [Acinetobacter baumannii OIFC074]
gi|421643750|ref|ZP_16084242.1| amidase [Acinetobacter baumannii IS-235]
gi|421649405|ref|ZP_16089799.1| amidase [Acinetobacter baumannii IS-251]
gi|421660217|ref|ZP_16100419.1| amidase [Acinetobacter baumannii Naval-83]
gi|421699438|ref|ZP_16138965.1| amidase [Acinetobacter baumannii IS-58]
gi|421796500|ref|ZP_16232562.1| amidase [Acinetobacter baumannii Naval-21]
gi|421801573|ref|ZP_16237531.1| amidase [Acinetobacter baumannii Canada BC1]
gi|169148725|emb|CAM86591.1| putative Amidase [Acinetobacter baumannii AYE]
gi|213056670|gb|ACJ41572.1| Glu-tRNA amidotransferase [Acinetobacter baumannii AB0057]
gi|213988289|gb|ACJ58588.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB307-0294]
gi|332727410|gb|EGJ58841.1| Amidase [Acinetobacter baumannii 6013150]
gi|332732316|gb|EGJ63578.1| Amidase [Acinetobacter baumannii 6013113]
gi|400209657|gb|EJO40627.1| amidase [Acinetobacter baumannii Canada BC-5]
gi|404571619|gb|EKA76676.1| amidase [Acinetobacter baumannii IS-58]
gi|408507411|gb|EKK09106.1| amidase [Acinetobacter baumannii IS-235]
gi|408513677|gb|EKK15293.1| amidase [Acinetobacter baumannii IS-251]
gi|408700411|gb|EKL45863.1| amidase [Acinetobacter baumannii OIFC074]
gi|408705495|gb|EKL50832.1| amidase [Acinetobacter baumannii Naval-83]
gi|410399029|gb|EKP51230.1| amidase [Acinetobacter baumannii Naval-21]
gi|410405154|gb|EKP57202.1| amidase [Acinetobacter baumannii Canada BC1]
Length = 369
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 188/384 (48%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS G+ P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGIYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L L ++ +D V + ++++K +++ V +HF
Sbjct: 187 LALLNVKADEVVWNCIYQALQKANLETVLQKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|152994400|ref|YP_001339235.1| amidase [Marinomonas sp. MWYL1]
gi|150835324|gb|ABR69300.1| Amidase [Marinomonas sp. MWYL1]
Length = 423
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 185/405 (45%), Gaps = 33/405 (8%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
Q PL+G +IKD+F V G+ T G+ S A A AV+A+ GA+ +G T M
Sbjct: 45 QQGPLNGAIISIKDLFQVQGYKTQAGSV--FLDGSLAQEDAEAVVALRKAGASLLGHTNM 102
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
E+AYS G N HYGTP NP R+ GGS+SG A +V + D +LGTDTGGS+R+PA
Sbjct: 103 TELAYSGLGLNPHYGTPDNPINAGRITGGSTSGGAASVALGVADAALGTDTGGSLRIPAG 162
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+CG+ GF+PS VS G +P++ S D+VG A + + ++L + S
Sbjct: 163 FCGLTGFKPSQQTVSRKGCLPLSNSLDSVGPIAKTVEECELLWQILSGTTTSSETAKSSD 222
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH-FLSEGN 262
D L++ +P++ L VE+ F + + ++ +++H F+
Sbjct: 223 A----DELRI-VVPTNFGMNDLDPLVEEGFVAKLAQ-------LEAASITIEHRFIEALE 270
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+ + +A + Y+ N ++ P ++ R+ R +
Sbjct: 271 SYKNLPVWQFSAFECHTFYGKNYDLDN----------AEIDPRVASRI---ARAKTINEE 317
Query: 323 VCQSVKTELRAALSALLGDHG--ILVIPTVPGPPPKLQMDPSALEVFRARAFSL--LSIA 378
V Q + +A + + + ++++PTV PK + R L S+A
Sbjct: 318 VFQQTQAARQAFIQQMANEEANTLILLPTVAVVAPKFSDLEQDADYDRLNLLCLRNTSLA 377
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
V C +S+P P+ + L A +G D LL+L + L
Sbjct: 378 NVLNGCSISLPFSFKQE-PMGLMLTAANGQDQALLSLAKKWQAIL 421
>gi|414872364|tpg|DAA50921.1| TPA: toc64 isoform 1 [Zea mays]
gi|414872365|tpg|DAA50922.1| TPA: toc64 isoform 2 [Zea mays]
Length = 281
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 3/147 (2%)
Query: 282 LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGD 341
L + EFK+ H +W+ +VKP + I V + ID CQ+V+ E R+ALS LL D
Sbjct: 4 LHKQEFKDKHMEWINSVKPAVDARI---VSDLSEDGDSDIDGCQNVRKEARSALSGLLKD 60
Query: 342 HGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAIS 401
GILVIPT G PPKL + E + ++ LLS+A +SG CQVSIPLG HD P+++S
Sbjct: 61 DGILVIPTALGCPPKLNAKELSSESYNSQTLRLLSLASMSGCCQVSIPLGTHDKCPISVS 120
Query: 402 LLAKHGSDGFLLNLVETLHNTLKEELQ 428
L+A+HG D FLL+ +T++ T++E+++
Sbjct: 121 LIARHGGDRFLLDTTQTMYTTIQEQVE 147
>gi|398878708|ref|ZP_10633819.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM67]
gi|398198891|gb|EJM85842.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM67]
Length = 382
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 187/405 (46%), Gaps = 52/405 (12%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G AIKD D+ GH T G+ +A A A V A+L G +GKT M E+A+
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFADAEPA-LRNADVVDAILDAGWQIVGKTNMHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CGI G
Sbjct: 73 VTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P++ VS G P+A S D VG FA AD +L+ QVI
Sbjct: 133 LKPTYGRVSRVGAHPLASSLDCVGPFA----------------ADMADLIAAMQVI---- 172
Query: 210 C--LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL-----SEGN 262
C Q+ +PS + G ++ D P LQ L S G
Sbjct: 173 CPGFQVQGLPSGNASVGFLEV--------------------DCDPHLQASLGAAADSAGW 212
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+ + + A +A L F+N T K +G + +R+ A RTSA +
Sbjct: 213 RRSQLHLSDFEAAFAAG--LTVINFENWAAFGHLTGKGLIGADVEQRLLAASRTSAADLA 270
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ V+ + A L + +L++PT+P PP L SA + A L+ +SG
Sbjct: 271 QAEKVRARFSQQVDAALEEFAVLLLPTMPSLPPTLIEARSASKAV-AGMTPLVRPFNLSG 329
Query: 383 FCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
+++P+ L L V + ++ + G D + L ++ E
Sbjct: 330 HPALTVPVELEGSGLKVGLQIVGRKGQDELVCAFGAQLQQSMAGE 374
>gi|418298732|ref|ZP_12910569.1| hypothetical protein ATCR1_14441 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355536058|gb|EHH05337.1| hypothetical protein ATCR1_14441 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 452
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 185/415 (44%), Gaps = 51/415 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ A + A+ A V A+ G IG+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGMATTAGSTVLA-DDAPASRDADVVTALKQAGMICIGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ V V A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPASKDGHRLPGGSSSGAGVTVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVG----------WF--AWDPKILNRVGRVLLQLA 193
G+ G++ S S GV P+A+S D++G W A K V R L
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTHTVQDAVWVDAAMRGKAAADVQRAPLA-- 246
Query: 194 DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS 253
++LV P V F D ++ D V ++VE+L V G V+ +
Sbjct: 247 -GLSLVVPETVFF--DGIE------DGVAAAFEQAVERL--------VRAGASVRRQAFP 289
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
+ L + KE+ A+ + + + V + D P + R
Sbjct: 290 IFSELFDLIKEK-----------GALVTAEAFTLHKTRLEGVDAARMD--PRVVARTRLG 336
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRAR 370
S + + AA S ++G +LV PT+P K L + A A+
Sbjct: 337 ANISMPDYIAIIEARERMTAAFSGMIGRQELLVSPTLPHVAAKVAPLLDNDDAFFAMNAK 396
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
I C VSIP G + ++PV + L HGSD +L++ ++
Sbjct: 397 TLRNTQIGNFFDLCGVSIPCGTGEADMPVGLLLSGLHGSDDHVLSVAMAAEEIIR 451
>gi|218671321|ref|ZP_03520991.1| amidase [Rhizobium etli GR56]
Length = 182
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 96/148 (64%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSGL A+KD+FDV G+ T GN T+TAP V +L GA +GKT DE+A
Sbjct: 16 LSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTATAPLVQTLLDAGACFVGKTNTDELA 75
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS+ G N H+G P NP P+ +PGGSSSGSAVAV A L D LGTDT GS+R+PA+ G+
Sbjct: 76 YSLIGGNIHFGMPRNPRDPNLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAINGL 135
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWF 175
G+RP+H ++ V P+A SFD G+
Sbjct: 136 IGWRPTHGSLDNRAVRPLAPSFDVPGFM 163
>gi|445429699|ref|ZP_21438292.1| amidase [Acinetobacter baumannii OIFC021]
gi|444761137|gb|ELW85554.1| amidase [Acinetobacter baumannii OIFC021]
Length = 369
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 49/384 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +++ R +
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKRAECTRTPK------- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L + + +D V + ++++K ++E V +HF
Sbjct: 187 LAVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------ 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK
Sbjct: 222 --EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQ 385
+L L ALL + L++PT+P PPK+ + + R F+L SG
Sbjct: 277 QLTQELDALLDKYDALILPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPA 330
Query: 386 VSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 331 ISVPLETSEGLPVGLQIVSKHQKD 354
>gi|424059737|ref|ZP_17797228.1| hypothetical protein W9K_00851 [Acinetobacter baumannii Ab33333]
gi|404670475|gb|EKB38367.1| hypothetical protein W9K_00851 [Acinetobacter baumannii Ab33333]
Length = 369
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 184/379 (48%), Gaps = 39/379 (10%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + V+ +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAATTLEQVKQAEVVRAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPL 390
L L ALL + LV+PT+P PPK+ + + A L+ +SG +S+PL
Sbjct: 278 LTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTA--LVRPFNLSGHPAISVPL 335
Query: 391 GLHDNLPVAISLLAKHGSD 409
+ LPV + +++KH D
Sbjct: 336 ETSEGLPVGLQIVSKHQKD 354
>gi|421786754|ref|ZP_16223141.1| amidase [Acinetobacter baumannii Naval-82]
gi|410410859|gb|EKP62748.1| amidase [Acinetobacter baumannii Naval-82]
Length = 369
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 182/379 (48%), Gaps = 47/379 (12%)
Query: 35 IKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGEN 94
+KD D+ G T G+ A A V +L IGKT + E+A+ I G N
Sbjct: 19 VKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGITGIN 77
Query: 95 KHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSH 154
+GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G +P+
Sbjct: 78 HAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGLKPTF 137
Query: 155 SAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLS 214
VS GV P + S D VG FA +++ + +Q+ D +P++ L
Sbjct: 138 GRVSRKGVYPPSSSLDCVGPFANSVEMIEKT----MQIIDPT--FKPAECTRTPKLAVLD 191
Query: 215 SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAA 274
+ V + ++++K ++E V +HF AA
Sbjct: 192 VKADEVVWNCIYQALQKANLETVLEKV-------------EHF--------------EAA 224
Query: 275 LSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAA 334
+ M+++ YE G+ T +G ++ R+ +A T+ +++ + VK +L
Sbjct: 225 YDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKAQLTQE 281
Query: 335 LSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQVSIPL 390
L ALL + LV+PT+P PPK+ + + R F+L SG +S+PL
Sbjct: 282 LDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAISVPL 335
Query: 391 GLHDNLPVAISLLAKHGSD 409
+ LPV + ++KH D
Sbjct: 336 ETSEGLPVGLQFVSKHQKD 354
>gi|300715728|ref|YP_003740531.1| amidase [Erwinia billingiae Eb661]
gi|299061564|emb|CAX58678.1| Amidase [Erwinia billingiae Eb661]
Length = 453
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 37/407 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ +IKD+FD+ G T G+ A A S A V +L GA +GKT M E
Sbjct: 72 PLDGVPVSIKDLFDLQGEATTGGSTVLADA-PVAESHATIVDKLLQAGAVIVGKTNMTEF 130
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV++ + ++G+DTGGSVR+PA++
Sbjct: 131 AYSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVSISDGMSLGAIGSDTGGSVRIPAAF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ G++P+ +S AGV+P++ S D+VG A D +L+ V D V RP +
Sbjct: 191 CGLTGYKPTARRISMAGVLPLSASLDSVGTLAHD--VLSCVA------LDAVIADRPLSL 242
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
++P V +GL V F ++ G V +P L+E
Sbjct: 243 TVKNLADAHFAVPQTGVLEGLDTQVAAAFERAVLTIKQAGAQVS-AIP-----LTE---- 292
Query: 265 QEYSIPSLAAL--SSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVW--EAVRTSAQK 320
I L+A+ S L+ +++ H + P + R+ EA+ + ++
Sbjct: 293 ----IAELSAINASGGFTALESWQW---HQPLIAQRAEGYDPRVVSRIRRGEALGEADRQ 345
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLLSI 377
V Q + R +S ++ + L++PTVP P+ L+ D A A S+
Sbjct: 346 RLVEQRADWQTR--VSHIVQQYDALLMPTVPFIAPRIADLEADEDAYFRINGAALRNPSV 403
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C VS+P PV + + A D L++ + LK
Sbjct: 404 INFLDGCAVSLPCSAKGQAPVGLMVAALPMQDDALMSWALAIETVLK 450
>gi|417552111|ref|ZP_12203181.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-81]
gi|417560391|ref|ZP_12211270.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC137]
gi|421200069|ref|ZP_15657229.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC109]
gi|421457206|ref|ZP_15906543.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-123]
gi|421632261|ref|ZP_16072922.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-13]
gi|421803669|ref|ZP_16239582.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-A-694]
gi|395522973|gb|EJG11062.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC137]
gi|395563670|gb|EJG25322.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC109]
gi|400206930|gb|EJO37901.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-123]
gi|400392370|gb|EJP59416.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-81]
gi|408710239|gb|EKL55472.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-13]
gi|410412629|gb|EKP64485.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-A-694]
Length = 369
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 184/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTLTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQTLQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + V+ +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAATTLEQVKQAEVVRAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|147782193|emb|CAN72047.1| hypothetical protein VITISV_002654 [Vitis vinifera]
Length = 200
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 93/146 (63%), Gaps = 21/146 (14%)
Query: 9 GAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
GAF+E+F L QP A +L LSG FA+ DIFDV G+VTGFG+ W RTH AT TA
Sbjct: 52 GAFVERFELLPFPQPPPPASRLLLSGFKFAVTDIFDVKGYVTGFGSTSWKRTHEEATKTA 111
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYS-----------------INGENKHYGTPTNPCAPD 107
AV A+L GAT +GKT++DE+++ I GEN +G+P NP P
Sbjct: 112 VAVTALLKNGATCVGKTVLDELSFGFVVYFSFDFTCVFEIKRITGENMDFGSPANPVLPS 171
Query: 108 RVPGGSSSGSAVAVGAKLVDFSLGTD 133
+PGGSSSGSAVAV ++LVDF++G D
Sbjct: 172 HIPGGSSSGSAVAVASQLVDFAIGID 197
>gi|299067850|emb|CBJ39061.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum CMR15]
Length = 448
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 185/402 (46%), Gaps = 31/402 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ A AATS A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAH-QRAATSDATAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+PA++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G A V VL A D + V + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGLRLG 251
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKL--FGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
+++ D V ++V +L G HI V+ + P L L E N
Sbjct: 252 LTRDYVAADLDDTVATAFARAVARLERAGAHI---------VRFEFPELLQ-LPEINGGG 301
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+P+ A + L R E + + ++ R+ + SA
Sbjct: 302 --GLPAAEAWAWHRPHLARAEAQYDR-------------RVATRIRRGEQMSAAAYLDVM 346
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFSLLSIAGVSGF- 383
+ + + AA LG+ ++PTV PP++ ++ FR A L + + ++
Sbjct: 347 AAREHMIAAARKRLGNLDAWLMPTVAVVPPEVAPLEADDARFFRTNALVLRNPSAINFLD 406
Query: 384 -CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C +++P+ LPV +SL D +L + + L+
Sbjct: 407 GCALTLPIHAAGELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|452130268|ref|ZP_21942840.1| amidase [Bordetella holmesii H558]
gi|451920193|gb|EMD70339.1| amidase [Bordetella holmesii H558]
Length = 451
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 189/402 (47%), Gaps = 48/402 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDE 85
P+ GL +IKD+FDV G T G+ AR AT+ + V +++ GA +GKT M E
Sbjct: 68 PIDGLPISIKDLFDVRGQTTMAGS--IAREGEPPATADSDVVCRLVAAGAVIVGKTNMSE 125
Query: 86 MAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 126 FAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSVRIPAA 185
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CG+ GF+PS VS AG +P++ S D++G LA V
Sbjct: 186 LCGLAGFKPSAWRVSMAGALPLSTSLDSIG-----------------PLASSVACCATLD 228
Query: 204 VIFAEDCLQLSSIPSDRV-TQGLVKSVEKLFGGHIIENVILGDYVKDKV-----PSLQHF 257
+ A+D +++P+D + +GL + + I+ D V D V +L
Sbjct: 229 AVLADD----TALPADALPLRGLRLA---------LPTAIVLDDVDDTVAQAFDAALSTL 275
Query: 258 LSEGNKEQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV- 314
+ G + +P A L+ +A E H + P + R+
Sbjct: 276 SAAGALIERIDVPEFAQLAQINAKGGFTASEAYAWHRSLLARKGDRYDPRVIARILRGKD 335
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
T+A ID+ S + A + A + + LV+PTVP P + ++ E F ++
Sbjct: 336 MTAADYIDLL-SARQIWVAGVDARIAHYDALVLPTVPQVAPAIAPLEASNEAFTRMNLTM 394
Query: 375 LSIAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
L + F C +S+P PV + + + +G+D +L
Sbjct: 395 LRNCTLINFLDGCALSLPCQAPGEAPVGLMIASSNGNDRRVL 436
>gi|424744663|ref|ZP_18172952.1| amidase [Acinetobacter baumannii WC-141]
gi|422942707|gb|EKU37744.1| amidase [Acinetobacter baumannii WC-141]
Length = 369
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 187/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L I KT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPAQND-AEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPT-------- 179
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
+ +S P V VK+ + ++ + I V+ ++ ++HF
Sbjct: 180 -EFTSAPKLAVLD--VKAEDVIW--NCIHQVLQKANLQTTSEKVEHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAETTLEQVKQAEVVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPVI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|83951505|ref|ZP_00960237.1| amidase [Roseovarius nubinhibens ISM]
gi|83836511|gb|EAP75808.1| amidase [Roseovarius nubinhibens ISM]
Length = 434
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 189/402 (47%), Gaps = 37/402 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G +IKD+FDV GHVT G A ++ A A AV + GA +G T M E+
Sbjct: 63 PLAGALVSIKDLFDVAGHVTRAGTRFMAE-NAPAKEDAEAVARLRRAGAVIMGHTNMTEL 121
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS G N HYGTP N P +PGGSSSG AV+V L D ++GTDTGGS+R+PA++ G
Sbjct: 122 AYSGLGLNPHYGTPENARYPGAIPGGSSSGGAVSVAQGLCDIAIGTDTGGSLRIPAAFNG 181
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I GF+P+ ++VS G + +++S D+VG +A V VR
Sbjct: 182 IVGFKPTQASVSRRGCLALSRSLDSVG-----------------PMARSVAHVRLGYEAL 224
Query: 207 AEDCLQLSSIPSDRVTQGLVKS--VEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ P+ LV+ + + FG +E + + ++ + G+K
Sbjct: 225 KQ--------PTKCTPNALVREFVIPENFGMEDLEPAVATGFAA----AVARIEAAGHKV 272
Query: 265 QEYSIPSLAALSS-AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
S+ SL A+ S A+ E + + D + + P ++ R+ A TSA
Sbjct: 273 SRASLASLEAMKSLAVWQFSAVECRGEYEDAYQSQRDLFDPRVASRMARAEETSAVGYRQ 332
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM--DPSALEVFRARAFSLLSIAGVS 381
+ + L A A L +L++PTVP PP D + +A +IA V
Sbjct: 333 TLNQRAALIEAFEAELAGR-VLLMPTVPILPPSFAAMEDDESYGRVNLQALRNPTIANVM 391
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +S+P H + + ++A HG D LL+L E L
Sbjct: 392 DGCAISLPYA-HGGDWIGVMMIAGHGRDTALLDLAEACEAVL 432
>gi|375134962|ref|YP_004995612.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
calcoaceticus PHEA-2]
gi|325122407|gb|ADY81930.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Acinetobacter calcoaceticus PHEA-2]
Length = 369
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 182/383 (47%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPA-QDDAEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIID---------------- 173
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS----LQHFLSEGNKEQE 266
+ S T +V + II N I + K + + ++HF
Sbjct: 174 ---PTFKSTEFTSAPKIAVLDVKADEIIWNCIYQAFQKANLETVLEKVEHF--------- 221
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ +
Sbjct: 222 -----EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAATTLEQVKQAEV 273
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
V+ +L L ALL + LV+PT+P PPK+ + + A L+ +SG +
Sbjct: 274 VRAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTA--LVRPFNLSGHPVI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|399019362|ref|ZP_10721510.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398097972|gb|EJL88265.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 450
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 198/410 (48%), Gaps = 38/410 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ GL +IKD+FDV G T G+ R + AAT +A V +++ GA +G+T M E
Sbjct: 68 PIEGLPVSIKDLFDVAGETTLAGSVAL-RGYPAATESAVVVKRLIAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP NP + R+PGGSSSG+A++V + +G+DTGGS+R+PA
Sbjct: 127 AYSGLGINPHYGTPRNPWQREVDGGRIPGGSSSGAAISVTDGMAVAGVGSDTGGSIRIPA 186
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ---LADDVNLV 199
++CGI GF+P+ V GV+P++++ D++G A + VL +A + +
Sbjct: 187 AFCGITGFKPTARRVPMQGVLPLSENLDSIGAMAPTVLCCAMMDAVLAGEEFVAPVAHPL 246
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQHFL 258
R ++++ + ++ + V G+ ++ KL G +I V+ +P+ L
Sbjct: 247 RGLRLLYPTNVVRDGM--DEHVAAGMQAAIAKLSAAGAVI--------VEQDIPAFNE-L 295
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
+ N + ++ A Q + +H D + G +S +A
Sbjct: 296 AAINAKGGFTAAEAWAWHR-----QLIAERKDHYDQRVVSRILRGKDMS---------AA 341
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
+DV + + A + L + L++PTVP PK+ + + + A +L
Sbjct: 342 DLLDVLHGRRRWI-AKVEQQLAGYDALLMPTVPIVAPKIADLQTGDDAYYAANGLILRNP 400
Query: 379 GVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+ F C VS+P PV +SL A G+D LL++ + LK+
Sbjct: 401 TLVNFLDGCAVSLPCHAAGTAPVGLSLAAAGGNDHRLLSIALAVETLLKQ 450
>gi|408784981|ref|ZP_11196730.1| hypothetical protein C241_00899 [Rhizobium lupini HPC(L)]
gi|408489113|gb|EKJ97418.1| hypothetical protein C241_00899 [Rhizobium lupini HPC(L)]
Length = 452
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 184/405 (45%), Gaps = 53/405 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G VT G+ A A+ A V A+ G IG+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLA-DDEPASRDADVVTALKQAGMICIGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPLSTDGHRLPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVG----------WF--AWDPKILNRVGRVLLQLA 193
G+ G++ S S GV P+A+S D++G W A + + V RV L
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGRTVADVQRVPLS-- 246
Query: 194 DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS 253
++LV P V F D ++ D V ++V++L V G V+ +
Sbjct: 247 -SLSLVVPETVFF--DGIE------DEVAAAFEQAVDRL--------VRAGASVRRQAFP 289
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
+ L E KE+ AL +A + + + + D P + R
Sbjct: 290 IFSELFELIKEK-------GALVTA----EAFALHKTRLEGADAARMD--PRVVARTKLG 336
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP----GPPPKLQMDPSALEVFRA 369
S + + AA S ++G +L+ PT+P P L+ D A A
Sbjct: 337 ANISVPDYIAIIDARERMTAAFSRMIGKGELLLSPTLPHVAASVAPLLESD-DAFFAMNA 395
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLL 413
R I C VSIP G D +PV + L G+D +L
Sbjct: 396 RTLRNTQIGNFLDLCGVSIPCGAGDAGMPVGLLLSGLDGTDDRVL 440
>gi|410631137|ref|ZP_11341818.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola arctica BSs20135]
gi|410149339|dbj|GAC18685.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola arctica BSs20135]
Length = 373
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 173/398 (43%), Gaps = 47/398 (11%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD DV G VT G+ T A S A V VL G IGK M E+A+ +
Sbjct: 16 LVAGVKDNIDVAGFVTQAGSESLCHT-PIALSHADVVTTVLGSGVKLIGKLNMHELAFGM 74
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N++ GTPTN PD + GGSSSG A AV VDFS+GTDTGGS+RVPA+ CG+FG
Sbjct: 75 TGVNEYLGTPTNYLFPDYITGGSSSGCATAVAQGKVDFSIGTDTGGSIRVPAACCGVFGL 134
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ +S GV+P S D +G A+ +R+ + + + ++P A
Sbjct: 135 KPTFGRLSRRGVLPAESSLDCIGPLAFSA---DRLIDAMCSMDKTFSPIKP----LANIK 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L S+ ++ V Q V + K + FL K + +P
Sbjct: 188 LARVSVNAESVIQMQVDNALK-----------------------KEFL----KVSQTDLP 220
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
S A L +E +G V T K LGP + R+ A + + V+
Sbjct: 221 SFTAAYDMALKLMNFEMWQAYGHLVGTGK--LGPDVENRLLGARNIDPSVVTEAEVVRKR 278
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR----AFSLLSIAGVSGFCQV 386
+ + L LV+PT+ P K +E + SL +SG +
Sbjct: 279 FSQEVDSALRGVDALVLPTLAAFPLK------RIEALAGQNDLHISSLTRPFNLSGHPAI 332
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+IP+ + PV + L+ G D + + + + + K
Sbjct: 333 TIPIRNNLGKPVGMQLVGAKGRDEVICYIAKKISDNNK 370
>gi|300692394|ref|YP_003753389.1| glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum PSI07]
gi|299079454|emb|CBJ52129.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum PSI07]
Length = 448
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 184/408 (45%), Gaps = 43/408 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ A AATS A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAH-QPAATSDATAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+P+++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G LA+ V+ + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGG-----------------PLANSVDCCAIVDAVLS 234
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++P + GL + + G +++ + + + V L+H G + +
Sbjct: 235 GQTLDTDAVPLAGLRLGLTRD----YVGADLDDTVTTAFER-AVARLEH---AGARIVRF 286
Query: 268 SIPSLAALSSAMRL--------LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
P L +RL L E H + + ++ R+ + SA
Sbjct: 287 DFPEL------LRLPEINGGGGLPAAEAWAWHRPHLARAEAQYDHRVAARIRRGEQMSAA 340
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFSLL--S 376
+ + + AA LG+ ++PTV PP++ ++ + FRA A L S
Sbjct: 341 AYLDVMAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDAQFFRANALVLRNPS 400
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ C +++P+ LPV +SL D +L + + L+
Sbjct: 401 VINFLDGCALTLPVHAAGELPVGLSLCGLAEDDARILRVGRAVEAALR 448
>gi|163796327|ref|ZP_02190288.1| Amidase [alpha proteobacterium BAL199]
gi|159178469|gb|EDP63011.1| Amidase [alpha proteobacterium BAL199]
Length = 451
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 184/406 (45%), Gaps = 34/406 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL +IKD+FDV GHVT G+ A A AP V + + GA +G+T M E
Sbjct: 72 PLEGLPISIKDLFDVRGHVTTAGSKVLA-DEPPAEVDAPIVARLRAAGAVLVGRTNMTEF 130
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N H GTP NP D R+PGGSSSG+AV+V + +G+DTGGSVR+P+
Sbjct: 131 AFSGIGINPHNGTPANPWDRDTRRIPGGSSSGAAVSVADGMATVGIGSDTGGSVRIPSGL 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+P+ V T G ++ + D++G A RV +V+ P +
Sbjct: 191 CGLAGFKPTQRRVPTVGACALSPTLDSIGPLAPTVACAARVHQVMAG--------EPVRP 242
Query: 205 IFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF-LSEGN 262
I L ++P V + L + + F + G + + +P + +SE N
Sbjct: 243 IGRRSVAGLRFAVPQSLVLEDLDGTTAQCFEAALSRLSAAGAVITE-IPFKELLAISEAN 301
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERVWEAVRTSAQKI 321
+ ++ ++ YE + H PDL P + R+ A SA
Sbjct: 302 AKGGFAA------------VECYELHSRH----VIRAPDLFDPRVVVRIRRAGEQSAVDY 345
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ E++AA +A+ +++PT P + ++ E F +L V
Sbjct: 346 ITLVRRRAEIQAACNAVTAPFDAVLMPTTARIAPPIAELEASDEAFAKNNILMLRNCSVG 405
Query: 382 GF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
F C ++P+ + PV + L+ + D LL++ + + +
Sbjct: 406 NFLDRCAATVPVQEPGSAPVGLMLMGETMGDDALLSVSAAVESVFR 451
>gi|344167864|emb|CCA80112.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [blood
disease bacterium R229]
Length = 448
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 184/408 (45%), Gaps = 43/408 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ A AATS A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAH-QPAATSDATAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+P+++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G LA+ V+ + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGG-----------------PLANSVDCCAIVDAVLS 234
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++P + GL + + G +++ + + + V L+H G + +
Sbjct: 235 GQTLDTDAVPLAGLRLGLTRD----YVGADLDDTVTTAFER-AVARLEH---AGARIVRF 286
Query: 268 SIPSLAALSSAMRL--------LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
P L +RL L E H + + ++ R+ + SA
Sbjct: 287 DFPEL------LRLPEINGGGGLPAAEAWAWHRPHLARAEAQYDHRVAARIRRGEQMSAA 340
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFSLL--S 376
+ + + AA LG+ ++PTV PP++ ++ + FRA A L S
Sbjct: 341 AYLDVMAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDAQFFRANALVLRNPS 400
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ C +++P+ LPV +SL D +L + + L+
Sbjct: 401 VINFLDGCALTLPVHAAGELPVGLSLCGLAEDDARILRVGRAVEAALR 448
>gi|374340234|ref|YP_005096970.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Marinitoga piezophila KA3]
gi|372101768|gb|AEX85672.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Marinitoga piezophila KA3]
Length = 448
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 186/391 (47%), Gaps = 44/391 (11%)
Query: 60 ATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAV 119
+T TA A+ +L+ G +GKT +DE A + EN +G NP +R+PGGSS GSA
Sbjct: 65 STYTATAIQKLLNEGFKIVGKTNLDEFAMGGSNENSAFGPVKNPWDLERIPGGSSGGSAA 124
Query: 120 AVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP 179
V A +V F++G+DTGGSVR PAS+CGI G++P++ A+S G+ A S D +G A +
Sbjct: 125 VVAAGIVPFAIGSDTGGSVRQPASFCGIVGYKPTYGAISRYGLSAFASSLDQIGVLATNV 184
Query: 180 KILNRVGRVLLQLAD------DVNLVRPSQVIFAEDCLQLSSIPSD---------RVTQG 224
K V V+ + D+N S++ + +++ +IP + +V +
Sbjct: 185 KDAATVVEVMSGKDEKDSTTLDINWDLTSEIEKEPEKIKI-AIPKEVFEVEGIDPKVLEK 243
Query: 225 LVKSVEKLFGGHI-IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSS------ 277
+++E+L I IE V ++P L++ +S Y I + + SS
Sbjct: 244 FKENIERLKENGIEIEEV--------EIPHLKYTVS------IYYIIAPSEASSNLSRYD 289
Query: 278 AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT-SAQKIDVCQSVKTELRAALS 336
MR R E ++ ++ T G + R++ T S+ D S ++R L+
Sbjct: 290 GMRFALREEKESLKDTYMETRDKGFGIEVKRRIFMGAFTLSSAYYDAYFSKAAKIRKLLN 349
Query: 337 ----ALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGL 392
+ + ++ PT PPK+ S LE + F++ A + G +SIP GL
Sbjct: 350 DDFEKVFEKYDAVLTPTTTMLPPKIGELKSPLEYYLMDLFTIS--ANMIGAPAISIPSGL 407
Query: 393 HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
DNLP I L++K D +L +
Sbjct: 408 IDNLPFGIHLISKPLEDAKMLRIANKFEKIF 438
>gi|445415424|ref|ZP_21434113.1| amidase [Acinetobacter sp. WC-743]
gi|444763079|gb|ELW87422.1| amidase [Acinetobacter sp. WC-743]
Length = 370
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 187/395 (47%), Gaps = 48/395 (12%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
L +KD D+ G T G+ T AAT A V +L+ GKT + E+A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGSQALMNT-PAATQNAEVVDRILAADCQITGKTNLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
I G N H+GT NP P+ +PGGSSSGSA AV A L DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 73 ITGINHHFGTAINPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ VS GV P S D VG FA VN++ + I
Sbjct: 133 LKPTFDRVSRQGVHPAVSSLDCVGPFAM-----------------SVNMIETAMQIIDPS 175
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN-----KE 264
L+ + L S + + +IE S+Q++L+ N +
Sbjct: 176 FHPLTDLAQAPKLAWLDVSADAV----VIE-------------SIQNYLANANLTLTKVK 218
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
++ P A + M+++ ++N T +G ++ R+ +A +T+ ++
Sbjct: 219 SKWFDP---AFEAGMQII---NYENWQAYAALTETGLVGADVNGRLLKAAQTTMDQVQQA 272
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ +K +A + ALL L++PT+P PPK+ + + SL+ +SG
Sbjct: 273 EQIKANFKAEIDALLAQFDALILPTLPQIPPKVSEAENTVAFLNLT--SLVRPFNLSGHP 330
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+SIPL LP+ + ++AK +D +L + + +
Sbjct: 331 AISIPLQTASGLPIGLQIVAKQNADEYLCAIAKYI 365
>gi|157372138|ref|YP_001480127.1| amidase [Serratia proteamaculans 568]
gi|157323902|gb|ABV42999.1| Amidase [Serratia proteamaculans 568]
Length = 449
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 184/406 (45%), Gaps = 35/406 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ ++KD+FDV G T G+ A A + A V +L GA IGKT M E A
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLADA-PVANNHAAVVAQLLQAGAVVIGKTNMTEFA 128
Query: 88 YSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP NP R+PGGSSSG+AVAV + ++G+DTGGSVR+PA++C
Sbjct: 129 YSGLGINPHYGTPANPWDRPAGRIPGGSSSGAAVAVADGMCFGAIGSDTGGSVRIPAAFC 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ G++P+ +S+ G++P++ S D++G A D + V+ Q SQ
Sbjct: 189 GLTGYKPTARRISSRGLLPLSPSLDSIGVIAHDVAGCIALDTVIAQQPLHPQQKTLSQAR 248
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI-IENVILGDYVKDKVPSLQHFLSEGNKE 264
FA +P GL + V F H+ +E ++ + +P H +E
Sbjct: 249 FA--------VPQTLALDGLDEEVTAAF--HLSVERLVQAGAQIEFIPC--HEFAE---- 292
Query: 265 QEYSIPSLAALSSA--MRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
LAA+++A L+ + + H + D P + R+ Q +
Sbjct: 293 -------LAAINAAGGFTALESWRW---HQPLIAEHAEDYDPRVLSRIRRGQLLDEQDLQ 342
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARAFSLLSIAG 379
+ + + + ++A + L++PT+P P +LQ D A A S+
Sbjct: 343 QLRMQRADWQRRVTAAVEKFDALLMPTLPFVAPTIAELQEDEDAYFRINGAALRNPSVIN 402
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
C +S+P D PV + + D LL + L E
Sbjct: 403 FLDGCALSLPCQRGDTAPVGLMVAGLPLHDEALLGWALAIERCLAE 448
>gi|33601974|ref|NP_889534.1| amidase [Bordetella bronchiseptica RB50]
gi|33576412|emb|CAE33490.1| putative amidase [Bordetella bronchiseptica RB50]
Length = 449
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 186/404 (46%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHS-AATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV G T G+ AR AA A V + + GA +G+T M E
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGS--VARQDEPAAVRDAVVVRRLRAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L DD ++ P+ +
Sbjct: 187 CGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAG-GDDADIPVPAAL 245
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ L+L ++P+ GL V F +L G
Sbjct: 246 L----GLRL-AVPTTLALDGLDAHVSATFAA-----------------TLAKLAEAGACI 283
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E ++P A L+ ++ E H D + P + R+ SA
Sbjct: 284 DEIAVPEFAQLADINSKGGFTAAEAWAWHRDLIERAADRYDPRVVARIRRGADMSAADYI 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + RA + A + + LV+PTVP P + ++ +F + +L +
Sbjct: 344 DLLAARQAWRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLIN 403
Query: 383 FCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F +S+P PV + + A +GSD +L + + + L
Sbjct: 404 FLDGSALSLPCHEAGTAPVGLMVAAANGSDRRVLAIGMAIEDLL 447
>gi|398995023|ref|ZP_10697914.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM21]
gi|398131079|gb|EJM20407.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM21]
Length = 382
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 186/407 (45%), Gaps = 54/407 (13%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
SG AIKD D+ GH T G+ +A + AT A V A+L G +GKT M E+A+
Sbjct: 13 SGKRVAIKDSIDIAGHATRSGSRAFADA-APATRNADVVDAILDAGWQIVGKTNMHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV L D ++GTDTGGSVRVPA+ CGI
Sbjct: 72 GVTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAGGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P++ VS G P S D VG FA AD +L+ QVI
Sbjct: 132 GLKPTYGRVSRVGAHPAESSLDCVGPFA----------------ADMADLIAAMQVI--- 172
Query: 209 DC--LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
C Q+ +PS + G ++ D P LQ L
Sbjct: 173 -CPGFQVQGLPSSNASVGFLEV--------------------DCDPHLQASLGAAADRAG 211
Query: 267 YSIPSL------AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+ +L AA ++ + ++ F+N T K +G + +R+ A RTSA
Sbjct: 212 WRRSTLRLSEFEAAFAAGLTVIN---FENWAAFGHLTGKGLIGADVEQRLLAASRTSAAD 268
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+ + V+ + A L +L++PT+P PP L SA + A L+ +
Sbjct: 269 LAQAEKVRERFSQQVDAALEQFAVLLLPTMPSLPPTLIEARSASKAV-AGMTPLVRPFNL 327
Query: 381 SGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
SG +++P+ L L V + ++ + D + L ++ E
Sbjct: 328 SGHPALTVPVELDCGGLKVGLQIVGRKDQDELVCAFGAQLQQSMAGE 374
>gi|424908949|ref|ZP_18332326.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392844980|gb|EJA97502.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 452
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 187/405 (46%), Gaps = 53/405 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G VT G+ A A+ A V A+ G IG+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLA-DDEPASRDADVVTALKQAGMICIGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPLSTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVG----------WF--AWDPKILNRVGRVLLQLA 193
G+ G++ S S GV P+A+S D++G W A + V RV L
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGRTAADVQRVPLS-- 246
Query: 194 DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS 253
++LV P V F D ++ D V ++V++L V G V+ +
Sbjct: 247 -SLSLVVPETVFF--DGIE------DEVAAAFKQAVDRL--------VRAGASVRRQAFP 289
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
+ L E KE+ + + A RL + D + LG IS + A
Sbjct: 290 IFSELFELIKEKGALVTAEAFALHKTRLEGADAARM---DPRVVARTKLGANISVPDYLA 346
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP----GPPPKLQMDPSALEVFRA 369
+ ID + + AA S ++G +L+ PT+P P LQ D A A
Sbjct: 347 I------ID----ARERMTAAFSGMIGKGELLMSPTLPHVAARVAPLLQSD-DAFFAMNA 395
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLL 413
+ I C VSIP G D +PV + L G+D +L
Sbjct: 396 KTLRNTQIGNFFDLCGVSIPCGTGDAGMPVGLLLSGLDGTDDHVL 440
>gi|33592922|ref|NP_880566.1| amidase [Bordetella pertussis Tohama I]
gi|384204220|ref|YP_005589959.1| amidase [Bordetella pertussis CS]
gi|408415768|ref|YP_006626475.1| amidase [Bordetella pertussis 18323]
gi|33572570|emb|CAE42157.1| putative amidase [Bordetella pertussis Tohama I]
gi|332382334|gb|AEE67181.1| amidase [Bordetella pertussis CS]
gi|401777938|emb|CCJ63296.1| putative amidase [Bordetella pertussis 18323]
Length = 449
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 185/404 (45%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV G T G+ AR AA A V + + GA +G+T M E
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGS--VARQGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L DD ++ P+
Sbjct: 187 CGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAG-GDDADMPAPA-- 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A L+L ++P+ GL V F +L G
Sbjct: 244 --ALRGLRL-AVPTTLALDGLDAHVSATFAA-----------------TLAKLAEAGACI 283
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E ++P A L+ ++ E H D + P + R+ SA
Sbjct: 284 DEIAVPEFAQLADINSKGGFTAAEAWAWHRDLIERAADRYDPRVVARIRRGADMSAADYI 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + RA + A + + LV+PTVP P + ++ +F + +L +
Sbjct: 344 DLLAARQAWRAGVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLIN 403
Query: 383 FCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F +S+P PV + + A +GSD +L + + + L
Sbjct: 404 FLDGSALSLPCHEAGTAPVGLMVAAANGSDRRVLAIGMAIEDLL 447
>gi|410419939|ref|YP_006900388.1| amidase [Bordetella bronchiseptica MO149]
gi|427821660|ref|ZP_18988722.1| putative amidase [Bordetella bronchiseptica Bbr77]
gi|408447234|emb|CCJ58906.1| putative amidase [Bordetella bronchiseptica MO149]
gi|410586925|emb|CCN01954.1| putative amidase [Bordetella bronchiseptica Bbr77]
Length = 449
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 185/404 (45%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV G T G+ AR AA A V + + GA +G+T M E
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGS--VARQGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L DD ++ P+
Sbjct: 187 CGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAG-GDDADMPVPA-- 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A L+L ++P+ GL V F +L G
Sbjct: 244 --ALRGLRL-AVPTTLALDGLDAHVSATFAA-----------------TLAKLAEAGACI 283
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E ++P A L+ ++ E H D + P + R+ SA
Sbjct: 284 DEIAVPEFAQLADINSKGGFTAAEAWAWHRDLIERAADRYDPRVVARIRRGADMSAADYI 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + RA + A + + LV+PTVP P + ++ +F + +L +
Sbjct: 344 DLLAARQAWRAGVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLIN 403
Query: 383 FCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F +S+P PV + + A +GSD +L + + + L
Sbjct: 404 FLDGSALSLPCHEAGTAPVGLMVAAANGSDRRVLAIGMAIEDLL 447
>gi|33597574|ref|NP_885217.1| amidase [Bordetella parapertussis 12822]
gi|33574002|emb|CAE38322.1| putative amidase [Bordetella parapertussis]
Length = 449
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 185/404 (45%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV G T G+ AR AA A V + + GA +G+T M E
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGS--VARQGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L DD ++ P+
Sbjct: 187 CGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAG-GDDADIPAPA-- 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A L+L ++P+ GL V F +L G
Sbjct: 244 --ALRGLRL-AVPTTLALDGLDAHVSATFAA-----------------TLAKLAEAGACI 283
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E ++P A L+ ++ E H D + P + R+ SA
Sbjct: 284 DEIAVPEFAQLADINSKGGFTAAEAWAWHRDLIERAADRYDPRVVARIRRGADMSAADYI 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + RA + A + + LV+PTVP P + ++ +F + +L +
Sbjct: 344 DLLAARQAWRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLIN 403
Query: 383 FCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F +S+P PV + + A +GSD +L + + + L
Sbjct: 404 FLDGSALSLPCHEAGTAPVGLMVAAANGSDRHVLAIGMAIEDLL 447
>gi|390958544|ref|YP_006422301.1| amidase [Terriglobus roseus DSM 18391]
gi|390413462|gb|AFL88966.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Terriglobus roseus DSM 18391]
Length = 444
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 189/401 (47%), Gaps = 57/401 (14%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL ++KD+FDV G VT G+ A AA ++ V + + GA IG+T M E
Sbjct: 66 PLLGLPVSVKDLFDVAGEVTTAGSVVLANAAPAAKDSS-VVARLRAAGAVLIGRTNMTEF 124
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++GTDTGGSVR+PA+
Sbjct: 125 AYSGLGLNPHYGTPANPWDRANRRIPGGSSSGAAVSVTDLMAAAAIGTDTGGSVRIPAAL 184
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+P+ V G++P+A+S D+VG A + R+ VL + RP
Sbjct: 185 CGLVGFKPTARRVPMDGIVPLARSLDSVGPIAPTVECCARLDAVL-----SGDFYRP--- 236
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
L + P R+ G+++ G+++E + P+ F +E
Sbjct: 237 --------LETKPLTRMRFGILQ-------GYVLEGL--------DEPTAFAF-----QE 268
Query: 265 QEYSIPSLAALSSAMRL--LQRYEFKNN---------HGDWVTTVKPDLGPGISERVWE- 312
+I S A + + L R N H + + + P +S R+
Sbjct: 269 ALLAIQSAGAHTDPVHFDALNRIPASNQTAAAEAFAWHRNLLESSGHRYDPHVSARILHG 328
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG-PPPKLQMDPSALEVFRARA 371
A +A +D+ Q+ + E+ A L + +++PT P PP +++ S F A
Sbjct: 329 AGMLAADFLDLMQA-RREIIAEAENLFAPYDAILLPTTPWIAPPIAELEASDDAYFHANG 387
Query: 372 FSLLSIAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSD 409
++L + F C +SIP+ PV + L G D
Sbjct: 388 -AMLRNTSIFNFLDGCALSIPIHRPGTAPVGLMLANSAGLD 427
>gi|427814399|ref|ZP_18981463.1| putative amidase [Bordetella bronchiseptica 1289]
gi|410565399|emb|CCN22955.1| putative amidase [Bordetella bronchiseptica 1289]
Length = 449
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 185/404 (45%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHS-AATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV G T G+ AR AA A V + + GA +G+T M E
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGS--VARQDEPAAVRDAVVVRRLRAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L DD ++ P+
Sbjct: 187 CGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAG-GDDADIPAPA-- 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A L+L ++P+ GL V F +L G
Sbjct: 244 --ALRGLRL-AVPTTLALDGLDAHVSATFAA-----------------TLAKLAEAGACI 283
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E ++P A L+ ++ E H D + P + R+ SA
Sbjct: 284 DEIAVPEFAQLADINSKGGFTAAEAWAWHRDLIERAADRYDPRVVARIRRGADMSAADYI 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + RA + A + + LV+PTVP P + ++ +F + +L +
Sbjct: 344 DLLAARQAWRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLIN 403
Query: 383 FCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F +S+P PV + + A +GSD +L + + + L
Sbjct: 404 FLDGSALSLPCHEAGTAPVGLMVAAANGSDRRVLAIGMAIEDLL 447
>gi|307941425|ref|ZP_07656780.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp.
TrichSKD4]
gi|307775033|gb|EFO34239.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp.
TrichSKD4]
Length = 429
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 188/413 (45%), Gaps = 46/413 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G ++K +FD+ G T + A+ AP+V+ + GA +G T M E
Sbjct: 55 PLAGALVSVKALFDLKGETTTSA-AKVLQIDPPASQDAPSVVRLDEAGAVFVGLTNMSEF 113
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS G N HYGTP NP P PGGS+SG AV+V L D ++G+DTGGS+R+PA++CG
Sbjct: 114 AYSGLGLNPHYGTPQNPIYPGCAPGGSTSGGAVSVALGLADIAIGSDTGGSLRIPAAFCG 173
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL------ADDVNLVR 200
I GF+PS ++VS G P++ S D+ G A +V+ A LV
Sbjct: 174 ITGFKPSQASVSLEGGNPLSDSLDSFGPMARTVSACELAWQVMSGQETSSAPAQKARLVV 233
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P F E V Q + + + + H+ + D V+ + S ++
Sbjct: 234 PRNFGFTE------------VDQAIAEGFKAVV-SHLRKAGF--DVVERDLTSCADLYNQ 278
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+P S R F+N+ D V +G +A SA +
Sbjct: 279 --------VPPWHMTSVESRAHYETHFQNSGADMDQRVHARMG--------KAEEISAIE 322
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLSIA 378
+ + +L A + +GD +L++PT P PPKL D + A S+A
Sbjct: 323 YRQTLNRRQKLIADFATEVGDD-LLILPTTPILPPKLSDLEDDANFNRLNLLALRNPSLA 381
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQRMS 431
V+ C +++P + L ++ L+A G D LL + + +++ EL R+S
Sbjct: 382 NVTDACSIALPYK-NGALTLSAMLVAPGGQDHKLLAVAK----SVEAELARLS 429
>gi|334145700|ref|YP_004538910.1| amidase [Novosphingobium sp. PP1Y]
gi|333937584|emb|CCA90943.1| amidase [Novosphingobium sp. PP1Y]
Length = 402
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 96/149 (64%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G IKD+F V GH G GNP W T+ A AV L GA IG DE+A
Sbjct: 31 LAGSQTVIKDLFRVAGHRIGAGNPVWLEQAPVQTANAWAVQQWLDAGADVIGIAHTDELA 90
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
S++G N HYGTP N APDR+PGGSSSGSA AV A LV +++ TDTGGS RVPASYCGI
Sbjct: 91 LSLSGTNVHYGTPLNTKAPDRIPGGSSSGSAAAVAAGLVPYAMATDTGGSTRVPASYCGI 150
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
FG R +H V G++P+A FDTVG A
Sbjct: 151 FGIRTTHGRVPVDGLVPLAPRFDTVGVLA 179
>gi|398801495|ref|ZP_10560737.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. GM01]
gi|398091816|gb|EJL82244.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. GM01]
Length = 447
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 183/409 (44%), Gaps = 40/409 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ GL +IKD+FDV G VT G+ + A + A V + GA +GKT M E
Sbjct: 67 PIDGLPISIKDLFDVAGEVTLAGS-HLLSNGTPAAANASMVERLQQAGAALVGKTNMTEF 125
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A++ G N HYGTP NP R+PGGSSSG+AVAV + ++GTDTGGSVR+PA+
Sbjct: 126 AFTGLGINPHYGTPANPWQRTEKRIPGGSSSGAAVAVADGMCLAAVGTDTGGSVRIPAAL 185
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS S + G +P+A S D++G A D + L D V +P
Sbjct: 186 CGLTGFKPSASRIDQRGTLPLAASLDSIGVIAHDVRS--------CWLLDSVIADQP--- 234
Query: 205 IFAEDCLQLSS----IPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
D +LS IP RV GL + V + + +L+ ++
Sbjct: 235 -LVMDQRELSDAHFVIPQTRVLAGLDQHVSAAW-----------------LRALEVLRAQ 276
Query: 261 GNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
G + E + LA L + A + +E H + + P + R+ +A
Sbjct: 277 GVQLTELPLDELAELDTMNARGGITAWEAWQWHQAYALSQPDAYDPQVLTRIKRGSLLNA 336
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM--DPSALEVFRARAFSLLS 376
+ + + + + + +++PTVP P L DP+ S
Sbjct: 337 EDAAELYQRRADWQQRVENAVAPFDGILMPTVPLIAPTLAELDDPARYMQVNMLMLRNTS 396
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+ + C +S+P PV + L + HG+D LL+ L TLK
Sbjct: 397 VINMLDGCSISLPCHQPGAAPVGLMLSSTHGNDAALLSWAAALETTLKR 445
>gi|385810676|ref|YP_005847072.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase A subunit
[Ignavibacterium album JCM 16511]
gi|383802724|gb|AFH49804.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase A subunit
[Ignavibacterium album JCM 16511]
Length = 472
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 201/415 (48%), Gaps = 50/415 (12%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
SA L+G AIKD+ H + A S T+T+ V ++ A IGKT
Sbjct: 61 SAKHGKLAGAVIAIKDVLAYKDHPLTCSSKILAGFISVYTATS--VQKLIDEDAIIIGKT 118
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
DE A + EN +G NP RVPGGSS GSAVAV A L D SLGTDTGGS+R P
Sbjct: 119 NCDEFAMGSSNENSAFGAVLNPIDESRVPGGSSGGSAVAVAADLCDASLGTDTGGSIRQP 178
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA-----DDV 196
A++CGIFG +P++ VS G+ A SFDT+G FA K ++ + +L ++ D
Sbjct: 179 AAFCGIFGMKPTYGRVSRFGLTAFASSFDTIGPFA---KSIDDIALILSVISGKDENDST 235
Query: 197 NLVRPSQVI------FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
+++ S I F +++ IP + +GL + V++ I E V + +
Sbjct: 236 SVI--SDFIEYPIKHFNNQKIKI-GIPKEYFAEGLDEEVKQ----KIFEVVDKLNNTGIE 288
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRLL-QRYEFKNNHGD-----WVTTVKPDLGP 304
V + ++E N Y + + A S+ R RY +++ +V + G
Sbjct: 289 VSEISLPMTEYNIATYYILTTAEASSNLARFDGARYGYRSKQSGTLEEMYVNSRSEGFGS 348
Query: 305 GISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP 353
+ R+ ++A AQK V + +K + A + + +++ PT P
Sbjct: 349 EVKRRIMLGTYVLSSGYYDAYYRKAQK--VRRLIKEDFDKAFTQV----DLILTPTTPSV 402
Query: 354 PPKL-QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKH 406
KL + + L+++ + ++ + A ++G ++IP+G++ + LP+ + +L+KH
Sbjct: 403 AFKLGEKSGNPLQMYLSDIYT--TSANLAGIPGLNIPIGINKERLPIGMQILSKH 455
>gi|412338126|ref|YP_006966881.1| amidase [Bordetella bronchiseptica 253]
gi|408767960|emb|CCJ52718.1| putative amidase [Bordetella bronchiseptica 253]
Length = 449
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 185/404 (45%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHS-AATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV G T G+ AR AA A V + + GA +G+T M E
Sbjct: 69 IDGLPLSIKDLFDVAGETTMAGS--VARQDEPAAVRDAVVVRRLRAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L DD ++ P+
Sbjct: 187 CGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAG-GDDADIPAPA-- 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A L+L ++P+ GL V F +L G
Sbjct: 244 --ALRGLRL-AVPTTLALDGLDAHVSATFSA-----------------TLAKLAEAGACI 283
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E ++P A L+ ++ E H D + P + R+ SA
Sbjct: 284 DEIAVPEFAQLADINSKGGFTAAEAWAWHRDLIERAADRYDPRVVARIRRGADMSAADYI 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + RA + A + + LV+PTVP P + ++ +F + +L +
Sbjct: 344 DLLAARQAWRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLIN 403
Query: 383 FCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F +S+P PV + + A +GSD +L + + + L
Sbjct: 404 FLDGSALSLPCHEAGTAPVGLMVAAANGSDRRVLAIGMAIEDLL 447
>gi|221065103|ref|ZP_03541208.1| Amidase [Comamonas testosteroni KF-1]
gi|220710126|gb|EED65494.1| Amidase [Comamonas testosteroni KF-1]
Length = 454
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 189/417 (45%), Gaps = 50/417 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL ++KD+FD+ GH T G + AT TA V + GA +G T M E
Sbjct: 69 PLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEF 127
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP NP + R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 128 AYSGLGLNPHYGTPRNPWQRENDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVRIPS 187
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+ GF+P+ V GV+P++ + D++G A P +
Sbjct: 188 ALCGLTGFKPTARRVPMQGVLPLSANLDSIGPLA--PSV--------------------- 224
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII--ENVILGDYVKDKVPSLQHFLS- 259
C L ++ S +QG +++ L G ++ NV+L + Q LS
Sbjct: 225 -----RCCAALDAVLSGE-SQGELRAA-SLQGLRLLTPTNVVLDGMDSAVAAAWQRALSL 277
Query: 260 ---EGNKEQEYSIPSLAALSS-----AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVW 311
G + E +P + L+ + + + +H D + + P + R+
Sbjct: 278 LYAAGVQITEAVVPPFSELAQINAKGGFTAAEAWAWHRSHIDGAGRLA-EYDPRVGTRIL 336
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVFRAR 370
SA + + + A + A + DH ++++PTVP PK+ +++ S F A
Sbjct: 337 RGKDISAADYIELLARRQQWIARVQAQMADHDLMLMPTVPVIAPKIAELEASDEAYFAAN 396
Query: 371 AFSLLSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
L + ++ C VS+P PV +SL D LL++ + L +
Sbjct: 397 GLMLRNPTLINFLDGCAVSLPCHRPGEAPVGLSLAGTAAQDQRLLSVALAVEALLAQ 453
>gi|375008395|ref|YP_004982028.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359287244|gb|AEV18928.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 470
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 184/419 (43%), Gaps = 37/419 (8%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
S ++ PL G+ AIKD+ V +T G+ A ++T + + GA GK
Sbjct: 66 SGNYRGPLHGIPIAIKDLLYVADEMTTMGSKIHRNFRPAYSATV--IERLTEAGAVFPGK 123
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T + E A+ N H+G NP P+R+PGGSS GS VA A + SLGTDTGGS+R+
Sbjct: 124 TNLHEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRI 183
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA-----DD 195
P+S+CGI G +P+H VS G P+A S D +G K + VL +A D
Sbjct: 184 PSSFCGIVGLKPTHGLVSKYGCFPLAWSLDHIGPMT---KTVRDAAYVLEAIAGYDPKDP 240
Query: 196 VNLVRPSQ---VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP 252
+ P+ + F E +G+ +E F H+ + V VK +
Sbjct: 241 TSFAAPTTSYALTFKESV------------KGVKIGIEPYFFDHVDKEV--EKAVKQAIA 286
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
SL+ EG + IP+L A + E H + + + D G + +
Sbjct: 287 SLER---EGAVVETVRIPTLQYAQYAEMITILSEASTIHHNHLVEREEDFGDDVRFLLKL 343
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP---SALEV-FR 368
SA Q ++ +L + +L+ PT+P PPK+ D + EV F
Sbjct: 344 GELPSAVDYLEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEVNFL 403
Query: 369 ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV---ETLHNTLK 424
++G V++P G LPV + ++ +G +LN+ ETLH LK
Sbjct: 404 DHIIRFTGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILNVADVFETLHPELK 462
>gi|293607950|ref|ZP_06690253.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427425982|ref|ZP_18916054.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-136]
gi|292828523|gb|EFF86885.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425697314|gb|EKU66998.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-136]
Length = 369
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 186/380 (48%), Gaps = 41/380 (10%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L I KT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPA-QDDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++ A
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPTEFTSAPK- 186
Query: 211 LQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L + + +D V + ++++K +E V +Y +
Sbjct: 187 LAVLDVSADEVVWNCIHQALQKANLDTTLEKV---EYFE--------------------- 222
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + V+
Sbjct: 223 ---AAYDAGMQII-NYENWQAFGELTETGL--IGSDVNGRLLKAAHTTLEQVKQAEVVRA 276
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIP 389
+L L ALL + LV+PT+P PPK+ + + A L+ +SG +S+P
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTA--LVRPFNLSGHPAISVP 334
Query: 390 LGLHDNLPVAISLLAKHGSD 409
L + LPV + +++KH D
Sbjct: 335 LETSEGLPVGLQIVSKHQKD 354
>gi|445443617|ref|ZP_21442642.1| amidase [Acinetobacter baumannii WC-A-92]
gi|444762562|gb|ELW86923.1| amidase [Acinetobacter baumannii WC-A-92]
Length = 369
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 182/383 (47%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L IGKT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDD-AEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++
Sbjct: 134 KPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPAECTRTPKL 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
L + V + ++++K ++E V +HF
Sbjct: 188 AVLDVKADEVVWNCIYQALQKANLETVLEKV-------------EHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNNRLLKAAHTTLEQVKQAEVVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P P K+ + + R F+L SG +
Sbjct: 278 LTQELDALLEKYDALVLPTLPQIPLKVSEAENTVAFLNLTGLVRPFNL------SGHPAI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + ++KH D
Sbjct: 332 SVPLETSEGLPVGLQFVSKHQKD 354
>gi|403052113|ref|ZP_10906597.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter bereziniae LMG 1003]
Length = 370
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 191/395 (48%), Gaps = 48/395 (12%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
L +KD D+ G T G+ T AAT A V +L+ KT + E+A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGSQALMNT-PAATQNAEVVDRILAADCQITAKTNLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
I G N H+GT NP P+ +PGGSSSGSA AV A L DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 73 ITGINHHFGTAINPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ VS GV P S D VG FA VN++ E
Sbjct: 133 LKPTFDRVSRQGVHPAVSSLDCVGPFAM-----------------SVNMI--------ET 167
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN-----KE 264
+Q+ PS L ++ KL + + ++ + S+Q++L++ N +
Sbjct: 168 AMQIID-PSFHPLTDLAQA-PKLAWLDVSADAVV-------IESIQNYLAKANLTLTKVK 218
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
++ P A + M+++ ++N T +G ++ R+ +A +T+ ++
Sbjct: 219 SKWFDP---AFEAGMQII---NYENWQAYAALTETGLVGADVNGRLLKAAQTTMDQVQQA 272
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ +K +A + ALL L++PT+P PPK+ + + SL+ +SG
Sbjct: 273 EQIKANFKAEIDALLAQFDALILPTLPQIPPKVSEAENTVAFLNLT--SLVRPFNLSGHP 330
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+SIPL LP+ + ++AK +D +L + + +
Sbjct: 331 AISIPLETASGLPIGLQIVAKQNADEYLCAIAKYI 365
>gi|159185658|ref|NP_357361.2| hypothetical protein Atu3243 [Agrobacterium fabrum str. C58]
gi|159140792|gb|AAK90146.2| glutamyl-tRNA amidotransferase subunit A [Agrobacterium fabrum str.
C58]
Length = 453
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 181/417 (43%), Gaps = 53/417 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ + + A+ A V A+ G SIG+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGMPTTAGSKVLS-DDAPASRDADVVAALKQAGMVSIGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ V V A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------W-DPKILNRVGRVLLQLA-DDV 196
G+ G++ S S GV P+A+S D++G W D + R L ++ V
Sbjct: 189 GVVGYKASRGRYSMHGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGRTAADLARMPLSGV 248
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
+LV P V+F D + G+ + E+ +++
Sbjct: 249 SLVVPETVVF------------DGIEPGVAAAFEQ---------------------AVER 275
Query: 257 FLSEGNKEQEYSIPSLAALSSAMR----LLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
+ G + + P + L +R L+ F + + P + R
Sbjct: 276 LVRAGASVRRQAFPVFSELFDLIREKGALVTAEAFSLHKARLEGADAARMDPRVVVRTRL 335
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRA 369
S + + AA SA++ IL+ PT+P K L + A A
Sbjct: 336 GANISMPDYIAIIEARDRMMAAFSAMISRDEILISPTLPHVAAKVAPLVENDDAFFAMNA 395
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+ I C VSIP G + +PV + L +G+D LL + +++
Sbjct: 396 KTLRNTQIGNFLDHCGVSIPCGTGEAGMPVGLLLSGLYGTDDRLLGVAMAAEEIIRD 452
>gi|383769955|ref|YP_005449018.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. S23321]
gi|381358076|dbj|BAL74906.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. S23321]
Length = 451
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL GL F++KD DV G T P++A A T+P V ++ GA +GKT MD+
Sbjct: 65 LPLYGLVFSVKDCIDVAGEQTTSACPEFAYV---AKDTSPVVADAIAAGAIYVGKTNMDQ 121
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG NP PD +PGGSSSG+AV+V F+ GTDTGGS RVPASYC
Sbjct: 122 FATGLVGVRSPYGIARNPHNPDYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYC 181
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 191
G+ GF+P+ A S G++ +SFDT+ + P + RVL +
Sbjct: 182 GVTGFKPAPGAFSQRGMVYACRSFDTISLYTQQPDDAYDIYRVLAR 227
>gi|193077472|gb|ABO12292.2| Glu-tRNA amidotransferase [Acinetobacter baumannii ATCC 17978]
Length = 369
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 186/387 (48%), Gaps = 55/387 (14%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A + +L I KT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPA-QDDAEIIKNILKADCEIIAKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P++ A +
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPTEFTSAPN- 186
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS----LQHFLSEGNKEQE 266
L + + +D II N I + K + + ++HF
Sbjct: 187 LAVLDVSADE----------------IIWNCIYQAFQKANLQTTSEKVEHF--------- 221
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ +
Sbjct: 222 -----EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAHTTLEQVKQAEV 273
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSG 382
V+ +L L ALL + LV+PT+P PPK+ + + R F+L SG
Sbjct: 274 VRAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SG 327
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSD 409
+S+PL + LPV + +++KH D
Sbjct: 328 HPAISVPLETSEGLPVGLQIVSKHQKD 354
>gi|410473301|ref|YP_006896582.1| amidase [Bordetella parapertussis Bpp5]
gi|408443411|emb|CCJ50065.1| putative amidase [Bordetella parapertussis Bpp5]
Length = 449
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 184/404 (45%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV G T G+ AR AA A V + + GA +G+T M E
Sbjct: 69 IDGLPISIKDLFDVAGETTMAGS--VARQGEPAAVRDAVVVRRLRAAGAVIVGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L DD ++ P+
Sbjct: 187 CGLAGFKPSAQRVSMQGVLPLSANLDSIGPLAPSVRCCATLDAILAG-GDDADIPAPA-- 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A L+L ++P+ GL V F +L G
Sbjct: 244 --ALRGLRL-AVPTTLALDGLDAHVSATFAA-----------------TLAKLAEAGACI 283
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E +P A L+ ++ E H D + P + R+ SA
Sbjct: 284 DEIVVPEFAQLADINSKGGFTAAEAWAWHRDLIERAADRYDPRVVARIRRGADMSAADYI 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + RA + A + + LV+PTVP P + ++ +F + +L +
Sbjct: 344 DLLAARQAWRARVEARIAGYDALVLPTVPVVAPAIADLEASDALFGSTNLLILRNPTLIN 403
Query: 383 FCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F +S+P PV + + A +GSD +L + + + L
Sbjct: 404 FLDGSALSLPCHEAGTAPVGLMVAAANGSDRHVLAIGMAIEDLL 447
>gi|91788558|ref|YP_549510.1| amidase [Polaromonas sp. JS666]
gi|91697783|gb|ABE44612.1| Amidase [Polaromonas sp. JS666]
Length = 457
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 190/412 (46%), Gaps = 39/412 (9%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL+G+ +IKD+FDV G T G+ A AA PAV + + GA G+T M E
Sbjct: 75 LPLAGIPVSIKDLFDVAGQTTAAGSTVLANARPAAEDC-PAVARLRAAGAVIAGRTNMVE 133
Query: 86 MAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A+S G N HYGTP NP A +R+PGGSSSG+AV+V LG+DTGGS+R+PA+
Sbjct: 134 FAFSGVGINPHYGTPVNPADTATERIPGGSSSGAAVSVATGAAMVGLGSDTGGSIRIPAA 193
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CGI GF+ + V T+G +P++ S DTV L R ++D + +
Sbjct: 194 LCGIVGFKSTARLVPTSGAVPLSTSLDTV-------CALTR------SVSDAITV----H 236
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ A + L+ P + ++ ++ G +++ + + + SL+ G +
Sbjct: 237 EVLAARTVTLAGKPLSACRLAVART--QMQDG--LDSTVASAFER----SLRVLRQAGAR 288
Query: 264 EQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+E ++ + L + A L E H + + + P ++ R+ + SA
Sbjct: 289 IEEIALEEINELPAINATGGLSAAESYAWHRTLIAAHQAEYDPRVALRILRGAQMSAADY 348
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL----EVFRARAFSLLSI 377
+ + + + A LG ++ PTVP P + SAL E FR L +
Sbjct: 349 IDLVAARRQWIVRMEARLGGFDAVLSPTVPLVAPAIA---SALHDDEEFFRVNGLLLRNT 405
Query: 378 AGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
A V+ C +S+P LPV + L D +L+L + L L
Sbjct: 406 AVVNMLDGCAISLPCHTPGQLPVGLMLWHAALHDDPVLDLALQVEAALAGSL 457
>gi|417862463|ref|ZP_12507516.1| hypothetical protein Agau_L300599 [Agrobacterium tumefaciens F2]
gi|338820867|gb|EGP54838.1| hypothetical protein Agau_L300599 [Agrobacterium tumefaciens F2]
Length = 452
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 179/418 (42%), Gaps = 57/418 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ + + A+ A V A+ G SIG+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGMATTAGSTVLS-NDAPASRDADVVTALKEAGMISIGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPVSKDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------WDPKILNRVGRVLLQLA----D 194
G+ G++ S S GV P+A+S D++G W + GR +A
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAIWVDAAMR--GRSAADIARAPLS 246
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
++LV P V F D + +G+ + E+ ++
Sbjct: 247 GLSLVVPETVFF------------DGIEEGVAVAFEQ---------------------AV 273
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMR----LLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
+ G + + P + L ++ L+ F + + + P + R
Sbjct: 274 ERLARAGASVRRQAFPLFSELFDLIKEKGALVTAEAFALHKARLESADAARMDPRVVART 333
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVF 367
S + + AA S ++G +LV PT+P K L A
Sbjct: 334 RLGANISMPDYIGILEARESMTAAFSGMIGKDELLVSPTLPHVAAKVAPLIDSDDAFFAM 393
Query: 368 RARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
A+ I C VSIP G + +PV + L HGSD +L + ++
Sbjct: 394 NAKTLRNTQIGNFFDLCGVSIPCGTGEAGMPVGLLLSGLHGSDDHVLGVAMAAEEIIR 451
>gi|94310865|ref|YP_584075.1| amidase [Cupriavidus metallidurans CH34]
gi|93354717|gb|ABF08806.1| amidase [Cupriavidus metallidurans CH34]
Length = 440
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 181/414 (43%), Gaps = 60/414 (14%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +IKD+FDV G VT G+ + A + +PAV + + GA IG+T M E
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKAL-DGGAPAQADSPAVARLRAAGAVLIGRTNMSEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP P P+RV GGS+SG AV+V + +LGTDTGGS+R+P+++CG
Sbjct: 128 AFSGLGLNPHYGTPRTPFDPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRIPSAFCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V G +P++ S D+ G A V +A D L +
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLARS---------VACCVAMDAVLSGETLDTR 238
Query: 207 AEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A D L + D V GL V + F +L ++G
Sbjct: 239 AADLRGLRFYVTRDFVCDGLDPEVAQTF-----------------EAALARLSAQGATIV 281
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGD--------WVTTVKPDLGPGISERVWEAVR-- 315
+ P L+R N G W T+ G +RV + +R
Sbjct: 282 PFDFPE----------LRRLPEINGGGGLTAAESWAWHRTLLAAKGDQYDQRVAQRIRRG 331
Query: 316 ---TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF 372
++A ID+ + + ++ + LL D ++PTV PP+L + F
Sbjct: 332 EKQSAADYIDLL-AARCAMQQRAAVLLRDADAWLMPTVAVRPPRLDALERDEDFFAVNGL 390
Query: 373 SLLSIAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+L A V F C ++P G + + + HGSD +L + +
Sbjct: 391 -VLRNASVINFLDGCAATLPAGEG----IGLGVCGLHGSDARVLQVAAAIERAF 439
>gi|59712093|ref|YP_204869.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
ES114]
gi|59480194|gb|AAW85981.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
ES114]
Length = 387
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 177/390 (45%), Gaps = 35/390 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L F + D D+ G GNP W A APAV +L GA +GKT MDE
Sbjct: 23 LENKKFVVSDCIDIKNTPNGQGNPTWLLEQRKARENAPAVDLILKKGAIFVGKTQMDEFG 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ ++G N HYG N + R GGSSSG+ AV D LG D GG +RVPA Y G+
Sbjct: 83 FGLHGHNPHYGPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGL 142
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+GF+ S SAV+ G+ +A+ ++GW A + + +V VL ++ V + R I
Sbjct: 143 YGFKASASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVLTPMSPLVTVER----IVV 198
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L + IP + T+ +E L E + + S+ ++ E
Sbjct: 199 LDSL-FADIPEEAKTK-----LETLIKSSPYEVI--------RSKSISKIITTKAAE--- 241
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-WEA-VRTSAQKIDVCQ 325
S L SA R L+ E W K +G I ++ W A ++ ++I + Q
Sbjct: 242 ---SFKVL-SATRGLRNLEL------WYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQ 291
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ + + L ++L + +L++PT P + L A+ S+A ++ Q
Sbjct: 292 --RELVISVLESILDEKTLLLMPTTANIAPPITATDEQLYKLNAQILKYTSLASLADLPQ 349
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+ +P ++ P ISL+ + G D L+++
Sbjct: 350 LHLPWFTVNDSPWGISLVGQKGMDRQLIDV 379
>gi|75909879|ref|YP_324175.1| amidase [Anabaena variabilis ATCC 29413]
gi|75703604|gb|ABA23280.1| Amidase [Anabaena variabilis ATCC 29413]
Length = 464
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 175/407 (42%), Gaps = 40/407 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD+ G T G A + A+ A AV + GA +G MDE A
Sbjct: 67 LAGVPFAVKNLFDLVGLTTLAGAKINAE-NPPASRDATAVAKLKQAGAVLVGALNMDEYA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP RV GGSS GSAVAV A LV F+LG+DT GS+RVPA+ CG+
Sbjct: 126 YGFVTENSHYGVTRNPHDLQRVAGGSSGGSAVAVAAGLVPFTLGSDTNGSIRVPAALCGV 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV-----LLQLADDVNLVRPS 202
FGF+P++ +S GV + SFD +G FA VG + +LQ DD + +
Sbjct: 186 FGFKPTYGRLSRGGVTLFSSSFDHIGPFA------RSVGDIATIFDILQGGDDRDPI--- 236
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG- 261
C Q P++ L + + I I DY + S +
Sbjct: 237 -------CTQR---PANPTLPQLHQDISH------IRIAIADDYFQKGATSAALAAVQQV 280
Query: 262 ----NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
N ++P +A ++ E N H D + T D P +R
Sbjct: 281 ADALNVTNYVTLPEAHRARAAAFVITASEGANLHLDKLRTRSQDFDPATRDRFLAGALIP 340
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFS 373
+ Q + R + + + +++ PT P P + L+ + R
Sbjct: 341 SNWYIQAQRFRQWYRDRIREVFQNVDVILAPTTPITAPLIGQQTMILDGEEILVRPHLGL 400
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
G +S+P+ + LP+ + L+A ++ F+L + L
Sbjct: 401 FTQPLSFIGLPVLSVPIQRPNTLPLGVQLIAAPYNEAFILQVAAVLE 447
>gi|410721279|ref|ZP_11360620.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Methanobacterium sp. Maddingley MBC34]
gi|410599357|gb|EKQ53911.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Methanobacterium sp. Maddingley MBC34]
Length = 474
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 197/417 (47%), Gaps = 59/417 (14%)
Query: 28 LSGLTFAIKDIFDV-DGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
L+G+ IK +V D H+T +P + + A V + + IG T MDE
Sbjct: 82 LAGMIVGIKSNINVEDFHITA-ASPTL--ENYLGSYDATVVRRIKAEDGIIIGMTNMDEF 138
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + E +G NP AP R+PGGSS GSAVAV A + D +LG+DTGGS+R PAS+CG
Sbjct: 139 AAGSSTETSFFGHTDNPAAPGRIPGGSSGGSAVAVAAGMCDLALGSDTGGSIRNPASHCG 198
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL---------------- 190
+ G++P++ AVS G++ +A SFD +G F+ D + + V+
Sbjct: 199 VMGYKPTYGAVSRQGLLDLAMSFDQIGPFSTDSSGIALMLEVIAGEDRRECTTMDWEVPE 258
Query: 191 ---QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
+ D N ++ ++ ++ +S P + + + +++ G ++E + DY+
Sbjct: 259 FTSSITDPENALKGMKLGVVKEFFDVSDGPIVNIIEDRINQMQEA-GAEVVE--LNFDYL 315
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV-------KP 300
K +P+ Y + + SA R +Y+ + +G+ + V +
Sbjct: 316 KLCLPT-------------YYLINYVEFFSATR---KYDGR-KYGERIEEVCGEEVLRRI 358
Query: 301 DLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
+G IS++ + S + ++ +R ++ LL D LV PTVP P KL
Sbjct: 359 QMGSYISQKEF-----SGKYYKKALQARSLIRREITGLLNDVDALVGPTVPKLPHKLG-- 411
Query: 361 PSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
++LE A+ +L+ IA ++G S P G + +PV + AK D ++ L+
Sbjct: 412 -TSLEPMEMYAYDILTVIANLAGIPAASTPAGDVNGIPVGMQFQAKPLDDEKIVQLM 467
>gi|56419927|ref|YP_147245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
kaustophilus HTA426]
gi|56379769|dbj|BAD75677.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
kaustophilus HTA426]
Length = 470
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 180/413 (43%), Gaps = 25/413 (6%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHS--AATSTAPAVLAVLSGGATSI 78
S ++ PL G+ AIKDI V T G ++ H T +A + + GA
Sbjct: 66 SGNYRGPLHGIPIAIKDILYVANETTTMG----SKIHRNFRPTYSATVIEKLTEAGAVFP 121
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT + E A+ N H+G NP P+R+PGGSS GS VA A + SLGTDTGGS+
Sbjct: 122 GKTNLHEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSI 181
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R+P+S+CGI G +P++ VS G P+A S D +G A + R + + +
Sbjct: 182 RIPSSFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMA-------KTARDAAYILEAMAG 234
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
P + S +G+ +E F H+ E V VK + SL+
Sbjct: 235 YDPKDPTSTDAPATSYSTQFMESVKGVKIGIEPYFFDHVDEGVERA--VKQAIASLER-- 290
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
EG + IP+L A + E H + + + D G + + SA
Sbjct: 291 -EGAVVETVRIPTLQYAQYAEMITILSEASAIHHNHLVEREEDFGDDVRFLLKLGELPSA 349
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP---SALEV-FRARAFSL 374
Q ++ +L + +L+ PT+P PPK+ D + EV F
Sbjct: 350 VDYLEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEVNFLDHIIRF 409
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV---ETLHNTLK 424
++G V++P G LPV + ++ +G +LN+ ETLH LK
Sbjct: 410 TGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILNVADVFETLHPELK 462
>gi|261419598|ref|YP_003253280.1| amidase [Geobacillus sp. Y412MC61]
gi|319766416|ref|YP_004131917.1| amidase [Geobacillus sp. Y412MC52]
gi|261376055|gb|ACX78798.1| Amidase [Geobacillus sp. Y412MC61]
gi|317111282|gb|ADU93774.1| Amidase [Geobacillus sp. Y412MC52]
Length = 470
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 181/414 (43%), Gaps = 27/414 (6%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATS 77
S ++ PL G+ AIKDI V T G+ D+ T+SA + + GA
Sbjct: 66 SGNYRGPLHGIPIAIKDILYVANETTTMGSKIHRDFRPTYSAT-----VIEKLTEAGAVF 120
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
GKT + E A+ N H+G NP P+R+PGGSS GS VA A + SLGTDTGGS
Sbjct: 121 PGKTNLHEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGS 180
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R+P+S+CGI G +P++ VS G P+A S D +G A + R + + V
Sbjct: 181 IRIPSSFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMA-------KTARDAAYILEAVA 233
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
P + S +G+ +E F H+ + V VK + SL+
Sbjct: 234 GYDPKDPTSTDAPATSYSTQFMESVKGVKIGIEPYFFDHVDKGV--ERVVKQAIASLER- 290
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
EG + IP+L A + E H + + + D G + + S
Sbjct: 291 --EGAVVETVRIPTLQYAQYAEMITILSEASAIHHNHLIEREEDFGDDVRFLLKLGELPS 348
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP---SALEV-FRARAFS 373
A Q ++ +L + +L+ PT+P PPK+ D + EV F
Sbjct: 349 AVDYLEAQQIRLKLDREFMEVFNKVDVLITPTIPFLPPKIGQDTVWINGEEVNFLDHIIR 408
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV---ETLHNTLK 424
++G V++P G LPV + ++ +G +LN+ ETLH LK
Sbjct: 409 FTGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILNVADVFETLHPELK 462
>gi|398827651|ref|ZP_10585859.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
gi|398219365|gb|EJN05848.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
Length = 371
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 187/385 (48%), Gaps = 48/385 (12%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+GL AIKD D+ G T G T +AA + L +L G +GKT+ E+A+
Sbjct: 14 TGLRVAIKDTIDIAGLPTRAGCRALDSTPAAAANAVVVDL-ILDAGCRIVGKTVPHELAF 72
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP PD +PGGSSSGSAVAV D ++GTDTGGS+R+PA+ C ++
Sbjct: 73 GVTGINDWAGTPQNPKFPDLIPGGSSSGSAVAVAEGSADVAIGTDTGGSIRIPAACCSVW 132
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P+ VS GV+P + D VG FA R L + + ++ P V A
Sbjct: 133 GLKPTFGRVSRKGVMPERTTLDCVGPFA----------RSLGGIVQAMEIIAPDFVPTAV 182
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
D +++ I L I D+ DK + F E K
Sbjct: 183 DGAKVAMI-------------SGLANWEI-------DHQMDKTIARSGF--ETFKASLEL 220
Query: 269 IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
+P A ++ + L+ E G V T +G +++R+ A + A +++ + V+
Sbjct: 221 MP--VAFTAGLSLIN-SETWAAVGHLVATGL--VGTDVADRLIAASQVDASELNDAEKVR 275
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFR-ARAFSLLSIAGVSGFC 384
+ + ALL + ++++PT+P PP + + + SA+E+ R R F+L SG
Sbjct: 276 RQFTEEVDALLNEVDVIILPTLPVFPPTVLEGRNNRSAVELTRLVRPFNL------SGHP 329
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSD 409
+++PLG + PV++ ++ + G D
Sbjct: 330 VLAMPLGPLEAGPVSLQIVGRKGED 354
>gi|167033221|ref|YP_001668452.1| amidase [Pseudomonas putida GB-1]
gi|166859709|gb|ABY98116.1| Amidase [Pseudomonas putida GB-1]
Length = 379
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 190/404 (47%), Gaps = 65/404 (16%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP-------AVLAVLSGGATSIGKT 81
SG AIKD DV G T R S A AP V +L+ GA K
Sbjct: 15 SGPRVAIKDTIDVAGTAT--------RASSQALEDAPLAVRHAEVVSHLLAAGARLTAKV 66
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
+ E+A+ G N+H GT NP P R+PGGSSSGSA AV A LVDFSLGTDTGGSVRVP
Sbjct: 67 GLHELAFGTTGINRHTGTAANPRFPGRIPGGSSSGSAAAVAAGLVDFSLGTDTGGSVRVP 126
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A CG+FG +P+ VS GV+P + S D VG FA +L R ++ D V P
Sbjct: 127 ACCCGVFGLKPTFGRVSRQGVMPASSSLDCVGPFAASLPMLVRAMAMI-----DPTFV-P 180
Query: 202 SQVIFAEDCLQLSSIPSDRVTQ--GLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
+QV + I RVT G+ K+V+ G + LG+ L+HF
Sbjct: 181 AQVPAK------ARIGVLRVTAEVGIHKAVQ---GALSASGLPLGNV------ELKHF-- 223
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
AA + M ++ R F+ G + T K +G I+ R+ A +T
Sbjct: 224 ------------GAAYEAGMVVINRETFQAC-GHLLETGK--VGSDIAGRLAAAGQTHDA 268
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF----SLL 375
+ ++V+ + L + +L +PT+P P +L+ E RA SL+
Sbjct: 269 ALAEAEAVRQRFTEEVDQALARYDVLALPTMPDFPLRLE------EASDTRAVLGMTSLV 322
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+SG +SIPLG LPV + L+ G+D LL + E L
Sbjct: 323 RPFNLSGHPALSIPLGSEAGLPVGLQLVGAKGADEKLLAVAERL 366
>gi|444354921|ref|YP_007391065.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidases [Enterobacter aerogenes EA1509E]
gi|443905751|emb|CCG33525.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidases [Enterobacter aerogenes EA1509E]
Length = 381
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
LTFA+KD D+ G T G+P + A A V A+L G GKT + E+A+ +
Sbjct: 27 LTFAVKDSLDIAGFPTRAGSPVL-QDAPPAVRHAAVVEALLDNGCQLRGKTTLHELAFGV 85
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N H GTP N P +PGGSSSGSA V A VDF++GTDTGGSVR+PA+ CG+ G
Sbjct: 86 TGINPHSGTPRNTHYPQLIPGGSSSGSAAVVAAGEVDFAVGTDTGGSVRMPAACCGVVGL 145
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+PS +S AGV+P S D VG FA D L +
Sbjct: 146 KPSFGRLSRAGVMPTESSLDCVGLFARDIATLRQ 179
>gi|222106661|ref|YP_002547452.1| allophanate hydrolase [Agrobacterium vitis S4]
gi|221737840|gb|ACM38736.1| Allophanate hydrolase [Agrobacterium vitis S4]
Length = 597
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 183/401 (45%), Gaps = 24/401 (5%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G T PD+A T A V + GA IGKT +D+
Sbjct: 67 PLWGIPFAVKDNIDVAGLPTTAACPDYAYTPEI---DATVVRLLKDAGALVIGKTNLDQF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G + P N P VPGGSSSGSAVA +V F+LGTDT GS R+PA
Sbjct: 124 ATGLVGVRTPHAIPRNAIDPKLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAGLNN 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQV 204
I G +PS A+S GVIP ++ D V FA + ++V V + AD + P+
Sbjct: 184 IVGLKPSVGALSATGVIPACRTLDCVSIFALTVEDAHKVFTVAAKHDAADAYSRTMPTGH 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A + +P+ KS + FG ++E + ++ ++ H L +
Sbjct: 244 ALASAPVLRIGVPA--------KSDREFFGDSLMEASF--EKALAELSAMGHTLVDLPFS 293
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
Y + +L L + +RY D KP+ ++ +++ A +T
Sbjct: 294 GFYEVANL--LYEGAWVAERYAAVKEFFD----AKPESFHPVTHKIYSAAKTLTAADAFS 347
Query: 325 QSVKTE-LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
+ + L+ L+ ++ ++ +PT P ++ ++ +R + + +
Sbjct: 348 GMYRLQALKQQLAPVIASVDVICVPTAPTHYTLADLEAEPIKA-NSRLGTYTNFVNLLDM 406
Query: 384 CQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +++P G +D LP +++LLA G+DG L LHN L
Sbjct: 407 CGIAVPTGTRNDGLPSSVTLLAPFGADGLTAALGSALHNRL 447
>gi|293602932|ref|ZP_06685371.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter
piechaudii ATCC 43553]
gi|292818726|gb|EFF77768.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter
piechaudii ATCC 43553]
Length = 460
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 96/152 (63%), Gaps = 4/152 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+ D+ G T G+P A T A TA V + GA +GKT M +
Sbjct: 71 PLHGVPIALKDLIDITGRPTTIGSPIHANT--VAARTAELVQQLQRAGAIILGKTHMVQF 128
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A G N+H GTP NP R+PGGSSSGSAVAV +L ++GTDTGGSVRVPASY
Sbjct: 129 AMGAWGFNQHMGTPRNPWDDHVHRIPGGSSSGSAVAVAGRLAPAAIGTDTGGSVRVPASY 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
CGI G +P+ +S+ GV+ ++Q+ D+VG FA
Sbjct: 189 CGITGLKPTVGRISSRGVVTLSQTLDSVGIFA 220
>gi|430810142|ref|ZP_19437257.1| amidase [Cupriavidus sp. HMR-1]
gi|429497376|gb|EKZ95909.1| amidase [Cupriavidus sp. HMR-1]
Length = 440
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +IKD+FDV G VT G+ + A + +PAV + + GA IG+T M E
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKAL-DGGAPAQADSPAVARLRAAGAVLIGRTNMSEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP P P+RV GGS+SG AV+V + +LGTDTGGS+R+P+++CG
Sbjct: 128 AFSGLGLNPHYGTPRTPFDPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRIPSAFCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V G +P++ S D+ G A V +A D L +
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLARS---------VACCVAMDAVLSGETLDTR 238
Query: 207 AEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A D L + D V GL V + F +L ++G
Sbjct: 239 AADLRGLRFYVTRDFVCDGLDPEVAQAFEA-----------------ALARLSAQGATIV 281
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGD--------WVTTVKPDLGPGISERVWEAVR-- 315
+ P L+R N G W T+ G +RV + +R
Sbjct: 282 PFDFPE----------LRRLPEINGGGGLTAAESWAWHRTLLAAKGDQYDQRVAQRIRRG 331
Query: 316 ---TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF 372
++A ID+ + + ++ + LL D ++PTV PP+L + F
Sbjct: 332 EKQSAADYIDLL-AARCAMQQRAAVLLRDADAWLMPTVAVRPPRLDALERDEDFFAVNGL 390
Query: 373 SLLSIAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+L A V F C ++P G + + + HGSD +L +
Sbjct: 391 -VLRNASVINFLDGCAATLPAGEG----IGLGVCGLHGSDARVLQAAAAIERAF 439
>gi|421855698|ref|ZP_16288074.1| putative amidase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403188923|dbj|GAB74275.1| putative amidase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 370
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 185/381 (48%), Gaps = 42/381 (11%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A + A V +L KT + E+A+ I
Sbjct: 15 LKVMVKDSIDIRGLRTMAGSKALMEVEPA-LANAEVVDLILKADCVITAKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP PD +PGGSSSGSA AV A L DFSLGTDTGGS+R+PA+ CG+FGF
Sbjct: 74 TGINPVFGTPVNPKYPDLIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGVFGF 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+PS VS GV P+ S D VG FA +++ +Q+ D + S+ I +
Sbjct: 134 KPSFGRVSRKGVYPVQSSLDCVGPFASSVEMIITA----MQIIDPT--FKSSEKIQHQPK 187
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN-KEQEYSI 269
L + ++ +D + D VKD +L++ N K + +
Sbjct: 188 LAVLNVEADSA---------------------VWDCVKD-------YLTQTNLKVEPVQV 219
Query: 270 PSLA-ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
+ + A + M+++ YE +G + K + P + +R+ A +T+ +++ + VK
Sbjct: 220 TTFSEAFQAGMQII-NYENWQAYGTLTESGK--ISPDVQQRLLNAAKTTLEQVRQAEDVK 276
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSI 388
+ LL + +L++PT+P PP++ + + A L+ +SG ++I
Sbjct: 277 ARFTQEIDELLEQYDVLILPTLPQIPPRVAEAENTVAFLNLTA--LVRPFNLSGHPALNI 334
Query: 389 PLGLHDNLPVAISLLAKHGSD 409
PL +PV + L+ + +D
Sbjct: 335 PLQTMTGMPVGLQLVGRKNAD 355
>gi|297530427|ref|YP_003671702.1| amidase [Geobacillus sp. C56-T3]
gi|297253679|gb|ADI27125.1| Amidase [Geobacillus sp. C56-T3]
Length = 470
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 181/413 (43%), Gaps = 25/413 (6%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHS--AATSTAPAVLAVLSGGATSI 78
S ++ PL G+ AIKDI V T G ++ H T +A + + GA
Sbjct: 66 SGNYRGPLHGIPIAIKDILYVANETTTMG----SKIHRNFRPTYSATVIEKLTEAGAVFP 121
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT + E A+ N H+G NP P+R+PGGSS GS VA A + SLGTDTGGS+
Sbjct: 122 GKTNLHEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSI 181
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R+P+S+CGI G +P++ VS G P+A S D +G A R +L+ +
Sbjct: 182 RIPSSFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMAKT----ARDAAYILEAMAGYDP 237
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
P+ + S +G+ +E F H+ E V VK + SL+
Sbjct: 238 KDPTSTNAPATSYSTQFMES---VKGVKIGIEPYFFDHVDEGVERA--VKQAIASLER-- 290
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
EG + IP+L A + E H + + + D G + + SA
Sbjct: 291 -EGAVVETVRIPTLQYAQYAEMITILSEASAIHHNHLVEREEDFGDDVRFLLKLGELPSA 349
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP---SALEV-FRARAFSL 374
Q ++ +L + +L+ PT+P PPK+ D + EV F
Sbjct: 350 VDYLEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEVNFLDHIIRF 409
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV---ETLHNTLK 424
++G V++P G LPV + ++ +G +LN+ ETLH LK
Sbjct: 410 TGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILNVADVFETLHPELK 462
>gi|423686252|ref|ZP_17661060.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
SR5]
gi|371494320|gb|EHN69918.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
SR5]
Length = 387
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 176/390 (45%), Gaps = 35/390 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L F + D D+ G GNP W A APAV +L GA +GKT MDE
Sbjct: 23 LENKKFVVSDCIDIKNTPNGQGNPTWLLEQKKAKENAPAVDLILKKGAIFVGKTQMDEFG 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ ++G N HYG N + R GGSSSG+ AV D LG D GG +RVPA Y G+
Sbjct: 83 FGLHGHNPHYGPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGL 142
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+GF+ S SAV+ G+ +A+ ++GW A + + +V VL ++ V + R I
Sbjct: 143 YGFKASASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVLTPMSPLVTVER----IVV 198
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L + IP + T+ +E L E + + S+ ++ E
Sbjct: 199 LDSL-FADIPEEAKTK-----LETLIKSSPYEVI--------RSKSISKIITTKAAE--- 241
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-WEA-VRTSAQKIDVCQ 325
S L SA R L+ E W K +G I ++ W A ++ ++I + Q
Sbjct: 242 ---SFKVL-SATRGLRNLEL------WYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQ 291
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ + + L ++L + +L++PT P L A+ S+A ++ Q
Sbjct: 292 --RELVISVLESILDEKTLLLMPTTANIAPPTTATDEQLYKLNAQILKYTSLASLADLPQ 349
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+ +P ++ P ISL+ + G D L+++
Sbjct: 350 LHLPWFTVNDSPWGISLVGQKGMDRQLIDV 379
>gi|358012469|ref|ZP_09144279.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. P8-3-8]
Length = 369
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 190/395 (48%), Gaps = 40/395 (10%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
L +KD D+ G T G+ ++ A T+ A V +L KT + E+A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMSGSKALMQSQPA-TTNAEVVDRILLADCQITAKTNLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
I G N +GT NP P +PGGSSSGSA AV A L DFSLGTDTGGS+R+PA+ CGI+G
Sbjct: 73 ITGINHTFGTALNPKYPALIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGIYG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ + VS GV P S D VG FA +++ +Q+ D +P +
Sbjct: 133 LKPTFNRVSRQGVQPAESSLDCVGPFANSVEMIETA----MQIIDPT--FQPIASLTQAP 186
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
L + + +D ++ ++K F K VP + S+
Sbjct: 187 KLAVLDVKADT---AVLDCIQKFFAQ------------KSLVP------------KHVSV 219
Query: 270 PSL-AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
S +A + M+++ YE +G+ T LG + R+ +A T+ Q+++ + ++
Sbjct: 220 DSFESAFQAGMQII-NYESWQAYGELTETGL--LGKDVQHRLLKAAETTLQQVEQAECIR 276
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSI 388
T+ + L ++ L++PT+P PPKL +D F +L+ +SG +SI
Sbjct: 277 TKFIQEIDHLFTEYDALLLPTLPQIPPKL-IDAENTVAF-LNLTALVRPFNLSGHPAISI 334
Query: 389 PLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
PL + LPV + ++AK +D L + + N +
Sbjct: 335 PLETEEGLPVGLQIVAKQNADEHLCAIASYIVNAV 369
>gi|429215382|ref|ZP_19206544.1| amidase [Pseudomonas sp. M1]
gi|428154609|gb|EKX01160.1| amidase [Pseudomonas sp. M1]
Length = 385
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 197/422 (46%), Gaps = 54/422 (12%)
Query: 11 FMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAV 70
F+ +FV++ +G A+KD D+ GH T G+ A + + A V V
Sbjct: 4 FVSEFVIELEPGG-----AGKRVAVKDTIDIAGHPTRCGSRALADS-APVQHHAEVVQRV 57
Query: 71 LSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSL 130
L G +GKT + E+A+ + G N GTP NP AP+RVPGGSSSGSA AVGA L D +L
Sbjct: 58 LDAGWRIVGKTNLHELAFGVTGINDWSGTPLNPQAPERVPGGSSSGSAAAVGAGLADIAL 117
Query: 131 GTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
GTDTGGSVRVPA+ CG+ G +PS VS GV P S D VG FA + L +VL
Sbjct: 118 GTDTGGSVRVPAACCGVAGLKPSFGRVSHVGVHPEHSSLDCVGPFAANMADLVAAMQVLC 177
Query: 191 QLADDVNLVRP-SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
VNL ++V F E +P+D Q + + G ++ LG++
Sbjct: 178 PGFGAVNLPGANARVAFLE-------VPADPHIQACLGAAADRAGWR-RASLYLGEFE-- 227
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT----TVKPDLGPG 305
AA + + ++ NH +W T K LG
Sbjct: 228 -----------------------AAFEAGLVVI-------NHENWAALGQFTGKGLLGAD 257
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
+ +R+ A RTSA ++ + V+ A+ + L D+ IL++PT+ PP L S
Sbjct: 258 VEQRLLAAGRTSAAQLAEAEGVRASFTRAIDSALDDYEILLLPTLASLPPLLSDARSGKS 317
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
V A SL+ +SG +S+P+ L H L V + ++ + G D + L L
Sbjct: 318 V--AALTSLVRPFNLSGHPALSVPVELEHGGLKVGLQIVGRKGDDERVCAFGAQLEQALA 375
Query: 425 EE 426
E
Sbjct: 376 AE 377
>gi|164608860|gb|ABY62765.1| IacH [Pseudomonas putida]
Length = 374
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 185/402 (46%), Gaps = 61/402 (15%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP-------AVLAVLSGGATSIGKT 81
SG +KD DV G T R S A AP V +L+ GA GK
Sbjct: 13 SGPRVVVKDTLDVAGTAT--------RASSQALEHAPLAERHAEVVSNLLAAGARLTGKV 64
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
+ E+A+ G N++ GT NP P R+PGGSSSGSA AV A L DFSLGTDTGGSVR+P
Sbjct: 65 SLHELAFGTTGINRYTGTAANPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIP 124
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A CG+FG +P+ VS GV+P S D VG FA +L R ++++ P
Sbjct: 125 ACCCGVFGLKPTFGRVSRKGVMPARTSLDCVGPFAASLPMLVRA----------MSMIDP 174
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP----SLQHF 257
+ P+ T+ + V ++ I V+ G +P L+HF
Sbjct: 175 TFT------------PAQVPTKARI-GVLRVTAEAAIHKVVQGALAASGLPLGNVELKHF 221
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
AA + M ++ R F+ G + T K +G I+ R+ A +TS
Sbjct: 222 --------------GAAYEAGMVVINRETFEGC-GHLLETGK--VGADIAGRLAAAGQTS 264
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
+ + V+T + +L + +L +PT+P P +L+ V SL+
Sbjct: 265 DSALAEAEGVRTRFTEEVDRMLASYDVLALPTMPDFPLRLEDATDTRAVLGMT--SLVRP 322
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+SG +SIPLG LPV + L+A G+D LL + E L
Sbjct: 323 FNLSGHPALSIPLGSECGLPVGLQLVAAKGADEKLLAVAERL 364
>gi|421138438|ref|ZP_15598501.1| Amidase [Pseudomonas fluorescens BBc6R8]
gi|404510325|gb|EKA24232.1| Amidase [Pseudomonas fluorescens BBc6R8]
Length = 375
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 193/403 (47%), Gaps = 52/403 (12%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
SG AIKD D+ G+ T G+ +A AT A V AVL G +GKT + E+A+
Sbjct: 13 SGRRVAIKDSIDIAGYPTRSGSRAFADA-PPATRHAHVVQAVLDAGWQIVGKTSLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CGI
Sbjct: 72 GVTGINDWSGTPVNPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P++ VS G P S D VG FA A+ +L+ QVI
Sbjct: 132 GLKPTYGRVSRTGAQPAVSSLDCVGPFA----------------ANMQDLIAAMQVI--- 172
Query: 209 DC--LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
C Q + PS V G + +V ++K + + + G ++Q
Sbjct: 173 -CPGFQAQAAPSGSVPVGFL-------------DVACEPWLKASL--MAAVDAAGWRQQR 216
Query: 267 YSIPSL-AALSSAMRLLQRYEFKNNHGDWVT----TVKPDLGPGISERVWEAVRTSAQKI 321
+ A + + ++ N +W T K +G + +R+ A RTSA +
Sbjct: 217 LHLDDFDTAFGAGLTVI-------NVENWAAFGHLTGKGLIGADVEQRLLAASRTSAADL 269
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ V+T + A L + +L++PT+P PP L + + AR L+ +S
Sbjct: 270 AEAEVVRTRFSHQVDAALEEFSVLLLPTMPDLPPTLAEARNGSQAV-ARMTPLVRPFNLS 328
Query: 382 GFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +++P+ L D+ L V + ++ + G D ++ L L ++
Sbjct: 329 GHPALTVPVTLADSGLKVGLQIVGRKGQDEWVCALGAQLQQSI 371
>gi|374998840|ref|YP_004974339.1| putative amidase [Azospirillum lipoferum 4B]
gi|357426265|emb|CBS89165.1| putative amidase [Azospirillum lipoferum 4B]
Length = 400
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 159/348 (45%), Gaps = 59/348 (16%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV-------LAVLSGGATSIGKTI 82
GLT A+KD D+ G T R SAA APA A+L+ G +GKT
Sbjct: 23 GLTVAVKDCLDIAGFPT--------RCGSAAFDQAPAASRHAAVVDALLAAGCRIVGKTT 74
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
M E+AY + G N +GTP NP P+ +PGGSSSGSAVAV A LVDF++GTDTGGSVR PA
Sbjct: 75 MHELAYGMTGINARFGTPVNPGWPELIPGGSSSGSAVAVAAGLVDFAVGTDTGGSVRQPA 134
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+FG +P+ + G P S D +G A +L R +A D + P+
Sbjct: 135 ACCGVFGMKPTFGRIDRRGASPADSSLDCIGPLARSIGMLERA-----MVAMDPGFL-PA 188
Query: 203 QVIFAEDCLQLSSIP----SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
+ + L L P +DR GL+ + +E +L D + +
Sbjct: 189 KGLDRPPRLALLRHPDGAGADREWTGLLPAHAAAM--PWVELPLLDDAFR---AGMTVIA 243
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
E ++ + + AAL +R R+ A R +
Sbjct: 244 RETHRAFGHLLSEPAALGDDVR---------------------------ARLDAAGRVTD 276
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSAL 364
+++ + V+ A + ALL D LV P +P PPP L DP A+
Sbjct: 277 EELARAEDVRARFTAEVDALLADCDALVTPALPMPPPGLDAARDPKAV 324
>gi|398826108|ref|ZP_10584372.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
gi|398221825|gb|EJN08221.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
Length = 451
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL GL F++KD DV G T P++A A T+P V ++ GA IGKT MD+
Sbjct: 65 LPLYGLVFSVKDCIDVAGEQTTSACPEFAYV---AQHTSPVVADAIAAGAIYIGKTNMDQ 121
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG NP D +PGGSSSG+AV+V F+ GTDTGGS RVPASYC
Sbjct: 122 FATGLVGVRSPYGIARNPHHADYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYC 181
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 191
G+ GF+P+ A S G++ +SFDT+ + P V RVL +
Sbjct: 182 GVTGFKPAPGAFSQRGMVYACRSFDTISLYTQQPDDAYDVYRVLAR 227
>gi|197104619|ref|YP_002129996.1| amidase [Phenylobacterium zucineum HLK1]
gi|196478039|gb|ACG77567.1| amidase [Phenylobacterium zucineum HLK1]
Length = 425
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 185/391 (47%), Gaps = 42/391 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G TFAIKD+FDV G TG G + T + AV +L G +++GKT E+A
Sbjct: 33 LDGPTFAIKDLFDVAGVPTGGGAQ--VPLDPSPTRHSRAVERLLQAGWSAVGKTHTVELA 90
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
Y G N+ G P NP P R PGGSSSGSAVAV A L D +LG+DTGGSVR+PA+ C
Sbjct: 91 YGGWGTNRAVGAPWNPWDPKVHRAPGGSSSGSAVAVAAGLCDAALGSDTGGSVRIPAAVC 150
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA--DDVNLVRP-- 201
G+ G +P VS GV P++ + DTVG A + + R L ++ D VR
Sbjct: 151 GVVGLKPGRGLVSLRGVHPLSPALDTVGTLA---RSVEMAARALAAISGPDGAAAVREPF 207
Query: 202 -SQVIFAEDC--LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
S+ + D ++++IP D + + + V +L+ + +++
Sbjct: 208 DSEAALSMDVRGRRVAAIPLDDLGE-VHPDVGRLY-----------------LEAIERLR 249
Query: 259 SEGNKEQEYSIPSLAALSSAMR-LLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
S G + PS S A LL E G+ + + P I R +
Sbjct: 250 SAGVAVEMVRPPSALEQSFAPNGLLMAGEGWRIWGERIQRHAEVMDPWIVRRFEAGRDVT 309
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP-PPKLQMDPSALEVFR-ARAFSLL 375
Q+++ + E +AA A + L+ PT P P PP ++D + + R RA + L
Sbjct: 310 DQRLEDVHRRRAEDQAAFHAWIAGWDGLLSPTCPIPAPPIDEVDETVSPLSRLTRAANYL 369
Query: 376 SIAGVSGFCQVSIPLGLH-DNLPVAISLLAK 405
+ G +S+P GL + LP + +L +
Sbjct: 370 DLPG------ISVPCGLTGEGLPAGLQILGR 394
>gi|421785303|ref|ZP_16221734.1| glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Serratia
plymuthica A30]
gi|407752567|gb|EKF62719.1| glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Serratia
plymuthica A30]
Length = 449
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 179/408 (43%), Gaps = 43/408 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ ++KD+FDV G T G+ A +AA A V +L GA IGKT M E A
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLAAAPAAAKHAA-VVERLLQAGAVVIGKTNMTEFA 128
Query: 88 YSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP NP A R+PGGSSSG+AVAV + S+G+DTGGSVR+PA++C
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+P+ ++ G++P++ S D++G A D
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHD--------------------------- 221
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP-----SLQHFLSE 260
C+ L + +DR Q +K++ + + ++ D + ++V SLQ
Sbjct: 222 -VAGCIALDTAITDRPLQPQLKNLSQ--ARFAVPQTLVLDGLDEEVAAGFHFSLQRLAQA 278
Query: 261 GNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
G + + S A L++ A E H + + P + R+
Sbjct: 279 GAQIETISCSEFAELAAINAAGGFSALESWRWHQALIAEHAEEYDPRVLSRIRRGQPLGE 338
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARAFSLL 375
+ Q + + + ++A + L++PTVP P +L+MD A A
Sbjct: 339 GDLQQLQQQRADWQRRVTAAMQAFDALLMPTVPLVAPTVAELEMDEEAYFRINGAALRNP 398
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
S+ C +S+P PV + L D LL + L
Sbjct: 399 SVINFLDGCALSLPCQRSGGAPVGLMLAGLPMHDEALLGWALAIERCL 446
>gi|333928941|ref|YP_004502520.1| amidase [Serratia sp. AS12]
gi|333933894|ref|YP_004507472.1| amidase [Serratia plymuthica AS9]
gi|386330764|ref|YP_006026934.1| amidase [Serratia sp. AS13]
gi|333475501|gb|AEF47211.1| Amidase [Serratia plymuthica AS9]
gi|333493001|gb|AEF52163.1| Amidase [Serratia sp. AS12]
gi|333963097|gb|AEG29870.1| Amidase [Serratia sp. AS13]
Length = 449
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 186/412 (45%), Gaps = 51/412 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ ++KD+FDV G T G+ AA A V +L G IGKT M E A
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RLLAAAPAAAKHAAVVERLLQAGTVVIGKTNMTEFA 128
Query: 88 YSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP NP A R+PGGSSSG+AVAV + S+G+DTGGSVR+PA++C
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+P+ ++ G++P++ S D++G A D
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHD--------------------------- 221
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF----LSEG 261
C+ L + +DR Q +K+V + + ++ D + ++V + HF L++
Sbjct: 222 -VAGCIALDAAITDRPLQPQLKNVSQ--ARFAVPQTLVLDGLDEEVAAAFHFSLQRLAQA 278
Query: 262 NKEQEYSIP-----SLAALSSA--MRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV 314
+ E +IP LAA+++A L+ + + H + + P + R+
Sbjct: 279 GAQIE-TIPCTEFAELAAINAAGGFSALESWRW---HQALIAEHAEEYDPRVLSRICRGQ 334
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARA 371
+ + Q ++ + + ++A + L++PTVP P +L+ D A A
Sbjct: 335 PLGEEDLQRLQQLRADWQRRVTAAVQAFDALLMPTVPLVAPTIAELEADEDAYFRINGAA 394
Query: 372 FSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
S+ C +S+P PV + L D LL + L
Sbjct: 395 LRNPSVINFLDGCALSLPCQRPGGAPVGLMLAGLPMHDEALLGWALAIERCL 446
>gi|425746237|ref|ZP_18864267.1| amidase [Acinetobacter baumannii WC-323]
gi|425486114|gb|EKU52486.1| amidase [Acinetobacter baumannii WC-323]
Length = 370
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 186/384 (48%), Gaps = 40/384 (10%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
L +KD D+ G T G+ ++ AA + A V +L+ KT + E+A+
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGSQALMQSQ-AAPANAEVVDRILAADCQITAKTNLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
I G N +GT NP P+ +PGGSSSGSA A+ A L DF+LGTDTGGS+R+PA+ CG++G
Sbjct: 73 ITGINHTFGTAINPKYPELIPGGSSSGSAAAIAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+ + VS AGV P + S D VG FA ++L + ++ P+ AE
Sbjct: 133 LKSTFGRVSRAGVHPASSSLDCVGPFANSVEMLESA----------MQIIDPTFHAQAE- 181
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN-KEQEYS 268
L+ +P KL ++ + + + ++Q +L++ N +
Sbjct: 182 ---LAQVP-------------KLAWLNVAADSAV-------IETIQQYLTQANLTVSTVT 218
Query: 269 IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
+ AA A + YE +G+ T LG ++ R+ +A T+ ++ + V+
Sbjct: 219 VEGFAAAFDAGMQIINYENWQAYGELTQTGL--LGADVNGRLLKAADTTLAQVKQAEQVR 276
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSI 388
+ A L ALL + L++PT+P PPKL + + A L+ +SG +S+
Sbjct: 277 ADFTAELDALLAQYDALILPTLPQLPPKLVDAENTVAFLNLTA--LVRPFNLSGHPAISV 334
Query: 389 PLGLHDNLPVAISLLAKHGSDGFL 412
PL PV + ++AK +D +L
Sbjct: 335 PLQTEQGQPVGLQIVAKRNADEYL 358
>gi|226355863|ref|YP_002785603.1| Amidase [Deinococcus deserti VCD115]
gi|226317853|gb|ACO45849.1| putative Amidase [Deinococcus deserti VCD115]
Length = 398
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 108/167 (64%), Gaps = 11/167 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PLSGLTF++KD+F V G P A T +A P+VL +L+ GA++ GKT +
Sbjct: 38 PLSGLTFSVKDLFGVPGW------PLAASTRAAVADPGPSVLVQQLLALGASATGKTHLH 91
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+A I G N + GT ++P P R+PGGSS G+AV+V VDF+LGTDTGGS+RVPA++
Sbjct: 92 EIALGITGLNGYGGT-SHPFEPQRLPGGSSGGAAVSVALNQVDFALGTDTGGSIRVPAAW 150
Query: 145 CGIFGFRPS--HSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
CG+ G++P+ H+A ST GV+P++ + D G A D + RV L
Sbjct: 151 CGVVGYKPTKGHAAWSTEGVLPLSWTCDHAGPLARDLATVVRVHEAL 197
>gi|333916681|ref|YP_004490413.1| Amidase [Delftia sp. Cs1-4]
gi|333746881|gb|AEF92058.1| Amidase [Delftia sp. Cs1-4]
Length = 456
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 186/405 (45%), Gaps = 32/405 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ GL ++KD+FD+ G T G A TA V + GA +G T M E
Sbjct: 71 PIEGLPVSVKDLFDIAGFPT-LGGSRLLADAPPAQRTAEVVQRLRQAGAVIVGTTNMTEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP NP D R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 130 AYSGLGINPHYGTPRNPWQRDEDGGRIPGGSSSGAAISVTDGMAMAAIGSDTGGSVRIPS 189
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+ GF+P+ VS GV+P++ + D++G A P + R L D + P
Sbjct: 190 ALCGLTGFKPTARRVSMEGVLPLSANLDSIGPLA--PSV-----RCCATL-DAILSGEPL 241
Query: 203 QVIFAEDCLQLSSI-PSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+ A L + P++ V G+ +V + + G ++ V + L++
Sbjct: 242 GELHAAPLQGLRLLAPTNVVLDGMDATVAAAWERTLTLLSQAGAHITHAVVAPFGELADI 301
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
N + ++ + + + +H + T + P + R+ SA
Sbjct: 302 NSKGGFTAA------------EAWAWHRHH---IATRLSEYDPRVGTRILRGKDISAADY 346
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ + + AA+SA + DH ++V+PTVP PK+ + E + +L +
Sbjct: 347 IDLLARRRQWIAAVSAQMADHDLIVMPTVPVVAPKIADLTQSDEAYFGANGLILRNPTLI 406
Query: 382 GF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F C +S+P PV +SL G D LL++ + L
Sbjct: 407 NFLDGCAISLPCQRAGEAPVGLSLAGLGGQDRRLLSVALAVEQLL 451
>gi|392379266|ref|YP_004986425.1| putative glutamyl-tRNA(Gln) amidotransferase [Azospirillum
brasilense Sp245]
gi|356881633|emb|CCD02622.1| putative glutamyl-tRNA(Gln) amidotransferase [Azospirillum
brasilense Sp245]
Length = 456
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 183/402 (45%), Gaps = 64/402 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSG-GATSIGKTIMDE 85
PL+GL +A KD+FD G G G P A S AVL L G GA IG T M
Sbjct: 66 PLAGLPYAAKDMFDSVGRSPGCGLPAAADDASGPAPRRAAVLERLDGAGARRIGFTTMTA 125
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+AY +G K NP D VPGGSSSGSAVAV + V +LG+DT GS+R+PA C
Sbjct: 126 LAYEPSGVGKAL----NPWNRDIVPGGSSSGSAVAVASGAVFAALGSDTAGSLRIPAQAC 181
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ ++P++ V AG + +A S DT+G IL R R D+ L+ P +
Sbjct: 182 GVTAWKPTYGVVPVAGAMALAPSLDTIG-------ILARSAR-------DIQLLAP---V 224
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK-- 263
A D + S P V +L D V+ +Q +G +
Sbjct: 225 LATD-MGFPSEPPACV-------------------ALLSDAVEASEAPIQAACRDGAEAI 264
Query: 264 -------EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
EQ + ++ ALS + L+ + E HG + P ++ R+ + +
Sbjct: 265 AACGVSLEQRSGLSAIEALSDPLFLILQAEAAAQHGGLALAAR---DPTLARRLAKGLDI 321
Query: 317 SAQKIDVCQSVKTELRAA-LSALLGDHGILVIPTVP-GPPPKLQMDPS-----ALEVFRA 369
+ ++ ++ + A L +L GD G L++P +P PP DP+ A ++R
Sbjct: 322 TPDRLAAAKAALSNATAPILDSLFGDAGALLLPVMPIRTPPVAVADPASPDFHAATLYRL 381
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDG 410
A++ V++P G D +PVA+ ++ + G+DG
Sbjct: 382 SAYT--RFVNALSLPAVAVPAGFDDRGMPVALQIVGRPGTDG 421
>gi|339321766|ref|YP_004680660.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338168374|gb|AEI79428.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 447
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 191/414 (46%), Gaps = 49/414 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWART--HSAATSTAPAVLAVLSGGATSIGKTIMD 84
PL+G+ ++KD+FDV G VT G AR AA++ APA+ + + GA +G+T M
Sbjct: 67 PLAGVPVSVKDLFDVQGDVTRAG----ARVLPERAASADAPAIARLRAAGAVFVGRTNMT 122
Query: 85 EMAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E AYS G N HYGTP NP R+PGGSSSG+AV+V + ++G+DTGGS R+PA
Sbjct: 123 EFAYSGVGINPHYGTPRNPYDRQAGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSCRIPA 182
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CGI GF+P+ V G +P++ S+D+VG A + V+ A +
Sbjct: 183 ALCGIAGFKPTARRVPLQGTVPLSPSYDSVGCLANTVACCAAIDAVMAGEAPPAGPAPLA 242
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+ A +PS V +G+ V ++F + G ++D +S +
Sbjct: 243 GLRLA--------VPSGLVLEGMSDEVAEVFSRTLRRLSAAGALLQD--------VSFDS 286
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI--------SERVWEAV 314
+Q I + L +A E HG + P + +R + +
Sbjct: 287 WDQLAGIGANGGLVAA-------EASAWHGSLLAEQADRYDPRVLSRIRLADGQRAADYL 339
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
R ++ ++C+ EL A A +V+PTVP P++ FR L
Sbjct: 340 RMLQRRGELCRQADAEL-AGFDA-------VVLPTVPVVAPRIANLDDDEAFFRTNRLLL 391
Query: 375 L--SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
+IA + C +S+P + PV + L +H SD LL + + L+ E
Sbjct: 392 RNPAIANMLDLCALSVPCHRLGDAPVGLMLFGRHLSDRRLLAIGMGIEAALRHE 445
>gi|311106567|ref|YP_003979420.1| amidase [Achromobacter xylosoxidans A8]
gi|310761256|gb|ADP16705.1| amidase family protein 10 [Achromobacter xylosoxidans A8]
Length = 449
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 188/404 (46%), Gaps = 37/404 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FD++G T G+ AR AA + A V +++ GA IG+T M E
Sbjct: 69 IEGLPISIKDLFDIEGETTMAGS--VAREGEPAADADAEVVRRLVAAGAVIIGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 127 AYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAAAAIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + + L+ D V +
Sbjct: 187 CGLTGFKPSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAI---LSGDGGPVPEAAA 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ L+L +IP+ + K V F + +KD G
Sbjct: 244 LRG---LRL-AIPTTLALDAMDKHVADSFAAAV-------SRLKDA----------GALV 282
Query: 265 QEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+E +IP A L++ A E H D + P + R+ SA
Sbjct: 283 EEIAIPEFAELAAINAKGGFTAAEAWAWHRDLIARAGKRYDPRVVSRIMRGKDMSAADYL 342
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ AA+ + + L++PT P P + ++ + + A +L +
Sbjct: 343 DLLDAREAWVAAVDRRIAGYDALIMPTTPIVAPAVADLQASDDAYYAANGLILRNPTLIN 402
Query: 383 F---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL---VETLH 420
F C +S+P PV + + +G+D +L++ VE L+
Sbjct: 403 FLDGCALSLPCHASGTAPVGLMIAGSNGTDRRILSIGLAVEALY 446
>gi|255318454|ref|ZP_05359687.1| Asp-trnaasn/glu-trnagln amidotransferase a subunit [Acinetobacter
radioresistens SK82]
gi|262378684|ref|ZP_06071841.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A subunit
[Acinetobacter radioresistens SH164]
gi|255304446|gb|EET83630.1| Asp-trnaasn/glu-trnagln amidotransferase a subunit [Acinetobacter
radioresistens SK82]
gi|262299969|gb|EEY87881.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A subunit
[Acinetobacter radioresistens SH164]
Length = 370
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 184/382 (48%), Gaps = 42/382 (10%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
L +KD D+ G T G+ A + A V +L KT + E+A+
Sbjct: 14 ALKVMVKDSIDIRGLRTMAGSKALMEVEPA-LANAEVVDLILKADCVITAKTNLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
I G N +GTP NP PD +PGGSSSGSA AV A L DFSLGTDTGGS+R+PA+ CG+FG
Sbjct: 73 ITGINPVFGTPVNPKYPDLIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGVFG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
F+PS VS GV P+ S D VG FA +++ +Q+ D + S+ I +
Sbjct: 133 FKPSFGRVSRKGVYPVQSSLDCVGPFASSVEMIITA----MQIIDPT--FKSSEKIQHQP 186
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN-KEQEYS 268
L + ++ +D + D +KD +L++ N K +
Sbjct: 187 KLAVLNVEADSA---------------------VWDCIKD-------YLTQTNLKVEPVQ 218
Query: 269 IPSLA-ALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+ + + A + M+++ YE +G + K + P + +R+ A +T+ +++ + V
Sbjct: 219 VTTFSEAFQAGMQII-NYENWQAYGTLTESGK--ISPDVQQRLLNAAKTTLEQVRQAEDV 275
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
K + LL + L++PT+P PP++ + + A L+ +SG ++
Sbjct: 276 KARFTQEIDELLEQYDALILPTLPQIPPRVAEAENTVAFLNLTA--LVRPFNLSGHPALN 333
Query: 388 IPLGLHDNLPVAISLLAKHGSD 409
IPL +PV + L+ + +D
Sbjct: 334 IPLQTMTGMPVGLQLVGRKNAD 355
>gi|158425811|ref|YP_001527103.1| amidase [Azorhizobium caulinodans ORS 571]
gi|158332700|dbj|BAF90185.1| putative Glu-tRNA amidotransferase [Azorhizobium caulinodans ORS
571]
Length = 449
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 98/149 (65%), Gaps = 3/149 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P +G+ AIKD+FDV G VT G+ A +++ AT+ A AV + + G IG++ M E
Sbjct: 69 PFAGIPVAIKDLFDVAGEVTTSGSKVLA-SNTPATADATAVARLRNAGFVVIGRSNMVEF 127
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP +P D RVPGGS+SG AVAV +LGTDTGGS R+PA++
Sbjct: 128 AYSGLGLNPHYGTPKSPWKRDEGRVPGGSTSGGAVAVADGFAHLALGTDTGGSCRIPAAF 187
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
CGI G++P+ S V G +P++QS D++G
Sbjct: 188 CGITGYKPTASRVPQEGCLPLSQSLDSIG 216
>gi|418405622|ref|ZP_12978942.1| hypothetical protein AT5A_00330 [Agrobacterium tumefaciens 5A]
gi|358007535|gb|EHJ99857.1| hypothetical protein AT5A_00330 [Agrobacterium tumefaciens 5A]
Length = 452
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 181/418 (43%), Gaps = 57/418 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G VT G+ + + A+ A V A+ G IG+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLS-NDAPASRDADVVSALKEAGMVCIGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPASTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------WDPKILNRVGRVLLQLA----D 194
G+ G++ S S GV P+A+S D++G W + G+ + A
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAVWVDAAMR--GKAAVDAARTPLS 246
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
++LV P V F D + +G+ + E+ ++
Sbjct: 247 GLSLVVPETVFF------------DGIEEGVAVAFEQ---------------------AV 273
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMR----LLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
+ G + + P + L ++ L+ F + + P + R
Sbjct: 274 ERLSRAGASVRRQAFPVFSQLFDLIKEKGALVTAEAFALHKARLEGADAARMDPRVVARA 333
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
S + + AA S ++G + +L+ PT+P K+ E F A
Sbjct: 334 RLGANISLPDYIAIIEARERMTAAFSGMIGKNELLISPTLPHVAAKVAPLVENDETFFAM 393
Query: 371 AFSLLSIAGVSGF---CQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L + F C VSIP G + +PV + L HG+D +L + ++
Sbjct: 394 NAKTLRNTQIGNFFDLCGVSIPCGTGEAGMPVGLLLSGLHGTDDHVLGVAMAAEEIIR 451
>gi|21227329|ref|NP_633251.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina
mazei Go1]
gi|23821593|sp|Q8PXJ1.1|GATA_METMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|20905684|gb|AAM30923.1| Glutamyl-tRNA(Gln) amidotransferase, subunit A [Methanosarcina
mazei Go1]
Length = 476
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 190/430 (44%), Gaps = 40/430 (9%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H+ PL+G+ AIKD V G G+ A + +LS GA +GKT M
Sbjct: 58 HEGPLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLSAGAVILGKTNM 115
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + E H+G NP +RVPGGSS GSA V A F+LG+DTGGSVR PAS
Sbjct: 116 DEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAS 175
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLV 199
+CG+ G +P++ AVS GV+ A S + VG A + + +++ + + + ++
Sbjct: 176 FCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAVLMDVIAGYDRRDSTSIDSK 235
Query: 200 RPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHF 257
Q +D L +P + +G+ VEK I + LG + + +P +++
Sbjct: 236 TEYQKALVDDVKGLKIGVPKEFFGEGIHPDVEKAVWDAIHKCESLGATWEEVSMPHIKYA 295
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVWEAV- 314
L+ Y I +++ SS + RY F+ +W V G V +
Sbjct: 296 LA------SYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKRRIL 349
Query: 315 ------------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---M 359
+ + + V VK + ALS + +L+ PT+P P K+
Sbjct: 350 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKV----DLLMAPTMPNPAFKIGEKIE 405
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
DP L + +++AGV +S+P G D LP+ + ++ K + +L T
Sbjct: 406 DPLTLYLSDINTCP-INLAGVP---SISVPCGFTDGLPIGLQIMGKPFDEETVLRAAYTF 461
Query: 420 HNTLKEELQR 429
+R
Sbjct: 462 EKNTDYHTKR 471
>gi|114707760|ref|ZP_01440654.1| putative amidase [Fulvimarina pelagi HTCC2506]
gi|114536749|gb|EAU39879.1| putative amidase [Fulvimarina pelagi HTCC2506]
Length = 448
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 191/419 (45%), Gaps = 45/419 (10%)
Query: 17 LQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA--ATSTAPAVLAVLS 72
L SA Q+ PL G+ AIKD+ D++G +TGFG+ R +S A +TAP V +
Sbjct: 61 LDKERSAGQVRGPLHGIPIAIKDLADIEGDITGFGS----RIYSTRPAKTTAPFVQQLEE 116
Query: 73 GGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSL 130
G +GKT M E A+ G N G P NP PD + GGSSSGSAVAV A +V ++
Sbjct: 117 AGMVIVGKTQMVEFAFGSWGTNSVLGAPRNPRMPDDYYIAGGSSSGSAVAVAADMVPAAI 176
Query: 131 GTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
G+DTGGSVR+PA+ CG G + S+ +V GV ++ SFDT+G L
Sbjct: 177 GSDTGGSVRIPAALCGTVGLKTSYGSVPVDGVAALSPSFDTIG--------------PLT 222
Query: 191 QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
DD L IFA + +R T V + ++ +E + Y +
Sbjct: 223 HHLDDARL------IFA----AMRRPELERETFKGVSKIIRIPSRSELEPIDPEIYAAFE 272
Query: 251 VPSLQHFLSEGNKEQEYSIPS-LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
SL G ++ +P A + + +E + GD V + P + R
Sbjct: 273 R-SLAVLSEIGMADRPLELPRGFADYQTDTGAIMAWEAYGSLGDTVNEPDVAIDPAVRTR 331
Query: 310 VWEA-VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVF 367
+ A +++ S + + A + +LG+ ++++PT P P +L +D + +
Sbjct: 332 IRAASAMDEGTYLELIASRQAAI-AKVEDVLGEDEVILLPTTPFPACRLSDVDETIFPMS 390
Query: 368 RARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R L A C VS+P+ LP+ + A+ + +++ + L L++
Sbjct: 391 R-----LTRFANYFDLCAVSLPVATTKAGLPIGTQICARRNREDLAISVAKRLQKRLRQ 444
>gi|126666927|ref|ZP_01737903.1| amidase [Marinobacter sp. ELB17]
gi|126628643|gb|EAZ99264.1| amidase [Marinobacter sp. ELB17]
Length = 455
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 187/406 (46%), Gaps = 41/406 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL A+K +FDV G VT G+ W + A S A V + S GA G T M E A
Sbjct: 81 LAGLPIALKALFDVAGEVTHSGSKWWKQI---AQSDALIVSRLRSAGAVVTGHTNMTEFA 137
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS G N HYG+P NP AP R+ GGSSSG+A AV + ++GTDTGGSVR+PA++CG+
Sbjct: 138 YSGLGLNPHYGSPANPLAPGRICGGSSSGAASAVAQGMAVAAIGTDTGGSVRIPAAFCGL 197
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL----LQLADDVNLVRPSQ 203
GF+PS + GV P++ + D++G A + R+ VL Q + V L R +
Sbjct: 198 VGFKPSQQRIPRQGVFPLSNTLDSIGPIARSVECCARIDAVLAGQRWQPSAPVGL-RGRR 256
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ +P++ + + +V F SLQ G +
Sbjct: 257 FV----------VPTNFMLDDVSVAVSAAFSR-----------------SLQQLRDCGAQ 289
Query: 264 EQEYSIPSLAALSSAMR--LLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK- 320
E P L AL + E + H DW+ + P + R+ SA
Sbjct: 290 IVEAPAPVLDALPELLAGGGFTAAESYHIHRDWLQQHGDEYDPRVRMRMERGAGISAADY 349
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL--SIA 378
+++ + ++ A L G+L PTVP PP L + + R L ++A
Sbjct: 350 LELVRCRAARIKQADEWLASYDGLLA-PTVPIEPPLLTELETDEDYARLNLLILRNPTVA 408
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ C +++P ++P + L+ ++G+D LLN + + L+
Sbjct: 409 NLLDLCAITLPNHRSGDVPSGLMLVGRNGADTALLNTAQAMEKGLE 454
>gi|197335992|ref|YP_002156298.1| amidase [Vibrio fischeri MJ11]
gi|197317482|gb|ACH66929.1| amidase, putative [Vibrio fischeri MJ11]
Length = 387
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 176/390 (45%), Gaps = 35/390 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L F + D D+ G GNP W A APAV +L GA +GKT MDE
Sbjct: 23 LENKKFVVSDCIDIKNTPNGQGNPTWLLEQRKARENAPAVDLILKKGAIFVGKTQMDEFG 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ ++G N HY N + R GGSSSG+ AV D LG D GG +RVPA Y G+
Sbjct: 83 FGLHGHNPHYAPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGL 142
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+GF+ S SAV+ G+ +A+ ++GW A + + +V VL ++ V + R I
Sbjct: 143 YGFKASASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVLTPMSPLVTVER----IVV 198
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D L + IP + T+ +E L E V + S+ ++ E
Sbjct: 199 LDSL-FADIPEEAKTK-----LETLITSSPYEIV--------RSKSISKIITTKAAE--- 241
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV-WEA-VRTSAQKIDVCQ 325
S L SA R L+ E W K +G I ++ W A ++ ++I + Q
Sbjct: 242 ---SFKVL-SATRGLRNLEL------WYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQ 291
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ + + L ++L + +L++PT P + L A+ S+A ++ Q
Sbjct: 292 --RELVISVLESILDEKILLLMPTTANIAPPITATDEQLYKLNAQILKYTSLASLADLPQ 349
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+ +P ++ P ISL+ + G D L+++
Sbjct: 350 LHLPWFTVNDSPWGISLVGQKGMDRQLIDV 379
>gi|398913724|ref|ZP_10656583.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398179809|gb|EJM67408.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 449
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 187/408 (45%), Gaps = 44/408 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ T A + A AV + + GA +G+T M E A
Sbjct: 68 LAGLPVSIKDLFDVKGQVTRAGSI-LLDTAMPAKADAIAVSRLRAAGAILLGRTNMSEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP AP RV GGSSSG+AV+V + LGTDTGGSVR+P+++CG+
Sbjct: 127 FSGLGLNPHYGTPRVRQAPSRVAGGSSSGAAVSVVEGMAVAGLGTDTGGSVRIPSAFCGL 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ S V G P+AQS D++G LA V I A
Sbjct: 187 TGFKPTASRVPLDGAFPLAQSLDSIG-----------------PLAHSVEDCWIIDGILA 229
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
LQ ++P GL ++ + + I++ + K S+Q + G
Sbjct: 230 GTHLQTPALP----LAGLNLAITRDYVLEDIDDATARAFQK----SVQRLTAAGAHVTWI 281
Query: 268 SIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDL-GPGISERVWEAVRTSAQKIDVC 324
P L L E +H W+ + L P ++ R+ SA D
Sbjct: 282 DFPELYQLPEINDAGGFTAAEAWYHHRYWLEGDRRHLYDPLVAYRIKRGKSLSA--FDYL 339
Query: 325 QSV--KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFS----LLSIA 378
Q + + +L A LG ++PTV P++ SAL+ A FS +L
Sbjct: 340 QLIEWRQQLIGAAQQRLGHFHAWLMPTVAIVAPRI----SALQENTATFFSTNGLVLRNP 395
Query: 379 GVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
V F C +S+P +LPV +S++ H D +L + +++ L
Sbjct: 396 SVVNFLDGCALSLPCHAPGDLPVGLSVVGLHRRDAQVLAVSKSIEKCL 443
>gi|332529378|ref|ZP_08405339.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041176|gb|EGI77541.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 452
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 187/406 (46%), Gaps = 32/406 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL +IKD+FDV G T G+ R A + A V +++ GA +G+T M E
Sbjct: 69 PLEGLPVSIKDLFDVAGETTLAGSVVL-RDAPPAQAHALVVQRLIAAGAVIMGRTNMTEF 127
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGS+SG AV+V + ++G+DTGGSVR+P++
Sbjct: 128 AYSGLGLNPHYGTPRNPWDRATGRIPGGSTSGGAVSVSDGMALAAIGSDTGGSVRIPSAL 187
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS V GV+P++ D++G A + VL + L P+
Sbjct: 188 CGLTGFKPSARRVPMDGVLPLSIQLDSIGPLAASVVCCAVLDAVL--SGEGGKLPEPA-- 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A L+L++ P V +G+ SV F +L+ S G
Sbjct: 244 --ALRPLRLAA-PLTLVREGMDASVASAFDA-----------------ALRAVSSAGALV 283
Query: 265 QEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
++ ++P A L+S A E H + P + R+ SA
Sbjct: 284 EDLALPEFAQLASINAQGGFTAAEAWAWHRPHIARAPERYDPRVISRIRRGAALSAADWL 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ + AA+ + + L++PTVP P + + E++ A +L + +
Sbjct: 344 DLMAARKAWVAAVEQRIAGYDALLLPTVPVVAPPIAALQESDELYGATNLLMLRNSTLIN 403
Query: 383 F---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
F C +S+P PV +++ +GSD +L++ + LK+
Sbjct: 404 FLDGCALSLPCHPRGGAPVGLTIAGSNGSDRRILSIGMAVEAELKK 449
>gi|398803836|ref|ZP_10562850.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Polaromonas sp. CF318]
gi|398095700|gb|EJL86035.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Polaromonas sp. CF318]
Length = 450
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 185/411 (45%), Gaps = 33/411 (8%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
L L+G+ ++KD+FDV G VT G+ A+ + A + PAV + + GA +G+T M E
Sbjct: 66 LALAGIPVSVKDLFDVAGQVTAAGSKVLAQA-APAQADCPAVARLRAAGAALVGRTNMVE 124
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A+S G N HYGTP NP P R+PGGSSSG+AV+V LG+DTGGS+R+PA+
Sbjct: 125 FAFSGVGINPHYGTPANPADPATARIPGGSSSGAAVSVATGAALVGLGSDTGGSIRIPAA 184
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CGI GF+ + V TAG +P++ S DTV L R R D V +
Sbjct: 185 LCGIVGFKSTARLVPTAGALPLSTSLDTV-------SALTRSVR------DAVTV----H 227
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ A ++L+ P + G ++++ + + SLQ G K
Sbjct: 228 EVLAARRVELTGKP--------LSGYRLAVAGTLMQDALSRTVAQAFERSLQVLREAGAK 279
Query: 264 EQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
E + + L++ A L E H + + P ++ R+ SA
Sbjct: 280 IVEIPLGEITELTAINATGGLSAAESYAWHRKLIAERQAGYDPRVALRILRGAGMSAADY 339
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVP-GPPPKLQMDPSALEVFRARAFSL--LSIA 378
+ + + A + A L ++ PTVP PP + E FR L S+
Sbjct: 340 IDLLAARKDWIARMEARLDGFDAVLSPTVPLVAPPIAGLLNDDTEFFRVNGLLLRNTSVV 399
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQR 429
+ C +S+P LPV + L D +L+L + L + LQ+
Sbjct: 400 NMLDGCAISLPCHAPGQLPVGLMLWHAALHDDTMLDLALQVEAALAQSLQQ 450
>gi|398867113|ref|ZP_10622582.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
gi|398237968|gb|EJN23706.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
Length = 372
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 186/383 (48%), Gaps = 40/383 (10%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G AIKD D+ G+ T G+ +A AAT A V A+L+ G +GKT + E+A+
Sbjct: 13 NGKRVAIKDSIDIAGYPTRSGSRAFADA-PAATKNAEVVDAILNAGWQIVGKTNLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV A L D +LGTDTGGSVRVPA+ CGI
Sbjct: 72 GVTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIALGTDTGGSVRVPAACCGIA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P++ VS G P+ S D VG FA R + L + ++ P
Sbjct: 132 GLKPTYGRVSRIGAHPLESSLDCVGPFA----------RTMEDLIAAMQVICPG------ 175
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV-ILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ +P D G ++ H+ ++ D + LQ LSE
Sbjct: 176 --FNMQGLPGDGAKVGF---LDVACDAHLQASLGAAADRAGWRRSHLQ--LSEFE----- 223
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
AA ++ + ++ F+N T K +G + R+ A RT+ +++ ++V
Sbjct: 224 -----AAFAAGLTVIN---FENWAAFGHLTGKGLIGADVETRLLAASRTTREELAEAEAV 275
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+T + A L D +L++PT+P PP L S + A L+ +SG ++
Sbjct: 276 RTRFTQQVDAALEDFAVLLLPTMPSLPPTLSEARSGSKAV-AGMTPLVRPFNLSGHPALT 334
Query: 388 IPLGLH-DNLPVAISLLAKHGSD 409
+P+ L L V + ++ + G D
Sbjct: 335 VPVELDCGGLKVGLQIVGRKGQD 357
>gi|254502596|ref|ZP_05114747.1| Amidase, putative [Labrenzia alexandrii DFL-11]
gi|222438667|gb|EEE45346.1| Amidase, putative [Labrenzia alexandrii DFL-11]
Length = 456
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 182/401 (45%), Gaps = 35/401 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G ++K +FDV G VT + AT APA+ + + GA G T M E
Sbjct: 85 PLAGALVSVKALFDVAGEVTTSAT-TVLKNSPPATEDAPAIARLDAAGAVFTGLTNMSEF 143
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS G N HYGTP N P PGGS+SG AVAV L D ++G+DTGGS+R+PA++ G
Sbjct: 144 AYSGLGLNPHYGTPENALYPGCAPGGSTSGGAVAVALGLCDIAIGSDTGGSLRIPAAFNG 203
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I GF+P+ S VS AG P++ S D+ G A V L QV+
Sbjct: 204 ITGFKPTQSTVSMAGGRPLSDSLDSFGPMA------KTVAECELTW----------QVMA 247
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ +IP + LV V K FG + IE + + K V L+ E E++
Sbjct: 248 GRE-----TIPEEPKAARLV--VPKNFGFNEIEAPVAEGF-KAVVEKLREAGLE-VVEKD 298
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
++ L A + E + ++ D T P + R+ A SA + +
Sbjct: 299 LAVIDLYAKVPPWHMTS-VESRAHYEDHFQTSPEKFDPRVHARMGRAEEISAVEYRQTLN 357
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLSIAGVSGFC 384
+ L A + +G IL++PT P PPK++ D A S+A V C
Sbjct: 358 RRQTLIEAFADEVGSD-ILLLPTTPILPPKIEDLADDGDFNRLNLLALRNPSLANVCDAC 416
Query: 385 QVSIPLGLHDNLPVAIS--LLAKHGSDGFLLNLVETLHNTL 423
+++P + N +S L+A G D LL + + L
Sbjct: 417 GIALP---YQNAGKTLSAMLIAPGGKDEKLLACAKAVETVL 454
>gi|332716026|ref|YP_004443492.1| amidase family protein [Agrobacterium sp. H13-3]
gi|325062711|gb|ADY66401.1| amidase family protein [Agrobacterium sp. H13-3]
Length = 452
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 181/418 (43%), Gaps = 57/418 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G VT G+ + + A+ A V A+ G +G+T M E A
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLS-NDAPASRDADVVSALKEAGMVCVGRTNMSEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 129 FSGLGINPHYGTPRNPASTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------WDPKILNRVGRVLLQLA----D 194
G+ G++ S S GV P+A+S D++G W + G+ + A
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAVWVDAAMR--GKAAVDAARTPLS 246
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
++LV P V F D + +G+ + E+ ++
Sbjct: 247 GLSLVVPETVFF------------DGIEEGVAVAFEQ---------------------AV 273
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMR----LLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
+ G + + P + L ++ L+ F + + P + R
Sbjct: 274 ERLSRAGASVRRQAFPVFSQLFDLIKEKGALVTAEAFALHKARLEGADAARMDPRVVARA 333
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
S + + AA S ++G + +L+ PT+P K+ E F A
Sbjct: 334 RLGANISLPDYIAIIEARERMTAAFSGMIGKNELLISPTLPHVAAKVAPLVENDETFFAM 393
Query: 371 AFSLLSIAGVSGF---CQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L + F C VSIP G + +PV + L HG+D +L + ++
Sbjct: 394 NAKTLRNTQIGNFFDLCGVSIPCGTGEAGMPVGLLLSGLHGTDDHVLGVAMAAEEIIR 451
>gi|299769940|ref|YP_003731966.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter oleivorans DR1]
gi|298700028|gb|ADI90593.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter oleivorans DR1]
Length = 369
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 184/383 (48%), Gaps = 47/383 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
L +KD D+ G T G+ A A V +L I KT + E+A+ I
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLNVEPA-QDDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N +GTP NP + +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA+ CG+FG
Sbjct: 74 TGINHAFGTPINPKYSELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P+ VS GV P + S D VG FA +++ + +Q+ D +P+
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPT-------- 179
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
+ + P V VK+ E ++ + I + ++ ++HF
Sbjct: 180 -EFTRTPKIAVLD--VKADEVVW--NCIHQALQKANLQSTSEKVEHF------------- 221
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
AA + M+++ YE G+ T +G ++ R+ +A T+ +++ + VK +
Sbjct: 222 -EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAHTTLEQVKQAEVVKAQ 277
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIAGVSGFCQV 386
L L ALL + LV+PT+P PPK+ + + R F+L SG +
Sbjct: 278 LTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL------SGHPVI 331
Query: 387 SIPLGLHDNLPVAISLLAKHGSD 409
S+PL + LPV + +++KH D
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKD 354
>gi|325957808|ref|YP_004289274.1| glutamyl-tRNA(gln) amidotransferase subunit A [Methanobacterium sp.
AL-21]
gi|325329240|gb|ADZ08302.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Methanobacterium sp.
AL-21]
Length = 459
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 211/471 (44%), Gaps = 94/471 (19%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQL---------------PLSGLTFAIKDIFDV-DGH 44
+ ++ DY AF+E SAH+ L+GL IK +V D H
Sbjct: 28 IGHKNDDYNAFLE----INEGSAHERAEAIDKKIENGEKVGKLAGLVIGIKSNINVEDFH 83
Query: 45 VTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPC 104
+T + + A V + IG T MDE A + E ++G NP
Sbjct: 84 ITA---ASKTLENYLGSYDATVVKRIKQEDGIIIGMTNMDEFAAGSSTETSYFGHTENPA 140
Query: 105 APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIP 164
AP R+PGGSS GSAVAV A++ D S+G+DTGGS+R PAS+CG+ GF+P++ VS G++
Sbjct: 141 APGRIPGGSSGGSAVAVAAEMCDLSIGSDTGGSIRNPASHCGVVGFKPTYGVVSRQGLLD 200
Query: 165 MAQSFDTVGWFA-------------------------WD-PKILNRVGRVLLQLADDVNL 198
+A SFD +G F+ WD PK +++G+ L+ + +
Sbjct: 201 LAMSFDQIGPFSRDVSGAALLMDVIGGYDETECTSVKWDSPKFTDQLGQNSLE-GTSLGV 259
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL--FGGHIIENVILGDYVKDKVPSLQH 256
V+ Q + D++ + +S++K+ G + E + DY+ +P+
Sbjct: 260 VK-----------QFFDVSDDKIVNIVEESIDKMKDMGAEVHE--LSFDYIDLCLPT--- 303
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
Y + + SA R +Y+ + +G+ + V G + R++
Sbjct: 304 ----------YYLINYVEFFSATR---KYDGR-KYGERIEEV---CGEEVLRRIYMGSYI 346
Query: 317 SAQKI-----DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARA 371
S ++ ++ ++ ++ LL + ++V PTVP P K+ ++LE +
Sbjct: 347 SQKEFSGKYYKKALQARSLIKREVNKLLQNVDVIVGPTVPMLPHKI---GTSLEPMDMYS 403
Query: 372 FSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ +L+ IA ++G S+ G + +PV I + K D +L ++ L +
Sbjct: 404 YDVLTVIANLAGIPAGSMKAGEVNGIPVGIQIQGKPFEDSKILGIMSALDD 454
>gi|422322042|ref|ZP_16403085.1| amidase [Achromobacter xylosoxidans C54]
gi|317403033|gb|EFV83570.1| amidase [Achromobacter xylosoxidans C54]
Length = 448
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 178/396 (44%), Gaps = 34/396 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FDV+G T G+ AR AA + A V +++ GA IG+T M E
Sbjct: 69 IEGLPISIKDLFDVEGETTMAGS--VAREGEPAADANAEVVQRLIAAGAVIIGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + +G+DTGGSVR+PA+
Sbjct: 127 AYSGLGINPHYGTPLNPWDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L V P +
Sbjct: 187 CGLTGFKPSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAILSGEGGPVPEALPLR- 245
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
L+L ++P G+ K V F ++ G
Sbjct: 246 -----GLRL-AVPRTLALDGMDKHVSDTF-----------------ARAVARLKEAGALV 282
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E +IP A L+ +A E H + + P + R+ SA
Sbjct: 283 DEIAIPEFAELANINAKGGFTAAEAWAWHRELIARAGKRYDPRVVSRILRGKDMSAADYL 342
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ AA+ + + L++PT P P + ++ E + A +L +
Sbjct: 343 DLLDAREAWVAAVDRRIAGYDALIMPTTPIVAPAVADLQASDEAYYAANGLILRNPTLIN 402
Query: 383 F---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
F C +S+P PV + + A +G+D +L +
Sbjct: 403 FLDGCALSLPCHAAGTAPVGLMIAASNGADRRVLAI 438
>gi|17545308|ref|NP_518710.1| amidase [Ralstonia solanacearum GMI1000]
gi|17427600|emb|CAD14119.1| probable amidase protein [Ralstonia solanacearum GMI1000]
Length = 448
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 182/402 (45%), Gaps = 31/402 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ A SAATS A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAH-QSAATSDATAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+PA++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G A V VL A D + V + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGLRLG 251
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKL--FGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
+++ D V ++V +L G HI V+ + P L L E N
Sbjct: 252 LTRDYVAADLDDTVATAFARAVAQLERAGAHI---------VRFEFPELLQ-LPEINGGG 301
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+P+ A + L R E + + ++ R+ + SA
Sbjct: 302 --GLPAAEAWAWHRPHLARAEAQYDR-------------RVAARIRRGEQMSAAAYLDVM 346
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLLSIAGVSG 382
+ + + AA LG+ ++PTV PP+ L+ D + AR S
Sbjct: 347 AARARMIAAARKRLGNLDAWLMPTVAVVPPEVAPLEADDARFFHTNARVLRNPSAINFLD 406
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C +++P+ LPV +SL D +L + + L+
Sbjct: 407 GCALTLPIHAAGELPVGLSLCGLADDDARILRVGRAVETALR 448
>gi|383785121|ref|YP_005469691.1| glutamyl-tRNA (Gln) amidotransferase A subunit/Amidase
[Leptospirillum ferrooxidans C2-3]
gi|383084034|dbj|BAM07561.1| putative glutamyl-tRNA (Gln) amidotransferase A subunit/Amidase
[Leptospirillum ferrooxidans C2-3]
Length = 493
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 200/465 (43%), Gaps = 71/465 (15%)
Query: 3 SRDSDYGAFMEKFVLQPSSS--AHQLP-----------LSGLTFAIKDIFDVDGHVTGFG 49
SRD GAF+ + P++ A QL G AIKD +++G T
Sbjct: 41 SRDGKLGAFL---TINPNAKNRARQLDNRRSELSKRSLFYGYPIAIKDNLNIEGLPTTCA 97
Query: 50 NPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRV 109
+ A S T+TA V +LS GA +GKT MDE A + EN G NP DRV
Sbjct: 98 SRILANHRSIYTATA--VSRLLSAGAVVLGKTNMDEFAMGSSTENSAMGITRNPWDHDRV 155
Query: 110 PGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSF 169
PGGSS GSAVAV + SLG+DTGGS+R PA++CG+ G +P++ +S G++ + S
Sbjct: 156 PGGSSGGSAVAVSGGMAPMSLGSDTGGSIRQPAAFCGVLGLKPTYGRISRQGLVAFSSSL 215
Query: 170 DTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ-----VIFAEDCL--QLSSIPSD--- 219
D +G FA +P V VLL D +++ ++ V E L ++ IP +
Sbjct: 216 DQIGPFAQNPLDALHV-TVLLSGHDPLDMTSSTRDPLEMVHDYEKPLKGKVVGIPEEFWG 274
Query: 220 -----RVTQGLVKSVEKLF-GGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLA 273
+V + L KS E L G +++ V ++PS Q+ + ++ L
Sbjct: 275 EGMDPQVRESLEKSRELLVKAGMVLKPV--------RLPSTQYAV---------NVYYLI 317
Query: 274 ALSSAMRLLQRY------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA--------- 318
A S A L R+ E K D + G G V +
Sbjct: 318 ATSEAASNLSRFDGIRYGERKTGARDLKELYEKSRGEGFGPEVKRRILLGTFALSAGYQD 377
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS-ALEVFRARAFSL-LS 376
Q Q V+ +R + +L P P P + S L ++ + F++ +
Sbjct: 378 QYYRKAQKVQALIREEFMRSFSECDLLFAPVTPTPAFRFGEKISDPLSMYLSDIFTISAN 437
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+AG+ S P + LPV L+ H S+G LL LH
Sbjct: 438 LAGLPALSTPSFP--TSNGLPVGAQLIGPHWSEGVLLKAASVLHE 480
>gi|390576928|ref|ZP_10256973.1| amidase [Burkholderia terrae BS001]
gi|389931166|gb|EIM93249.1| amidase [Burkholderia terrae BS001]
Length = 451
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 191/401 (47%), Gaps = 29/401 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ ++KD+FD+ G VT G+ R + A A AV + GA +G+T M E A
Sbjct: 68 LAGVPVSVKDLFDIKGQVTTAGS-RILRDATPAVRDAAAVARLREAGAVFVGRTNMSEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGT NP P R+ GGSSSG+AV+V V +LGTDTGGSVR+PA++CG+
Sbjct: 127 FSGLGLNPHYGTLLNPAHPKRLAGGSSSGAAVSVALGHVAAALGTDTGGSVRIPAAFCGL 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V G++P++ SFD++G A + ++ A D RP
Sbjct: 187 VGFKPTARRVPLDGIVPLSASFDSIGPIARSVDCCALIDSIVSGQALD-TAPRPLA---- 241
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L+L + SD V L ++V F N +G ++ S++ F E
Sbjct: 242 --GLRL-GVTSDYVADDLDETVSTAF------NRAIG-MLRRAGASVERFAFPELHEVAG 291
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTSAQKIDVCQS 326
P LA +++A Q + + H V P + +R+ R++A ID+ +
Sbjct: 292 RYP-LAGITAA----QAWAWHREH---VARDADTYDPRVLKRLRAGEGRSAADYIDLLAA 343
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF--- 383
+ +R A L ++PTV PP + S + F + +L V F
Sbjct: 344 RERFVRDT-RARLARFDAWLMPTVAIVPPAIASVESDDDAFSSTNAKVLRNPAVVNFMDG 402
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C +++P LPV +SL +D +L + ++ L+
Sbjct: 403 CALTLPCHRQGELPVGLSLCGPALADASILAIARSIEALLR 443
>gi|421481278|ref|ZP_15928864.1| amidase [Achromobacter piechaudii HLE]
gi|400200728|gb|EJO33678.1| amidase [Achromobacter piechaudii HLE]
Length = 449
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 176/397 (44%), Gaps = 36/397 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FD++G T G+ AR AA A V +++ GA IG+T M E
Sbjct: 69 VEGLPISIKDLFDIEGETTMAGS--VAREGEPAADENAEVVQRLIAAGAVIIGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + +G+DTGGSVR+PA+
Sbjct: 127 AYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G +A V
Sbjct: 187 CGLTGFKPSAWRVSMTGVLPLSANLDSIG-----------------PIAASVRCCAELDA 229
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE-GNK 263
+ + D S +P +GL +V +E +V D + L E G
Sbjct: 230 VLSGDG---SPVPEALPLRGLRLAVPTTLALDAMEK-----HVADSFAAAVARLKEAGAM 281
Query: 264 EQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
E +IP A L ++ E H D + P + R+ SA
Sbjct: 282 VDEIAIPEFAELGNINSKGGFTAAEAWAWHRDLIARAGKRYDPRVVSRIMRGQDMSAADY 341
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ AA+ + + L++PT P P + ++ E + A +L +
Sbjct: 342 LDLLDAREAWVAAVDRRIAGYDALIMPTTPIVAPAVADLAASDEAYYAANGLILRNPTLI 401
Query: 382 GF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
F C +S+P PV + + +G+D +L +
Sbjct: 402 NFLDGCALSLPCHAQGTAPVGLMIAGSNGADRRILAI 438
>gi|338730589|ref|YP_004659981.1| amidase [Thermotoga thermarum DSM 5069]
gi|335364940|gb|AEH50885.1| Amidase [Thermotoga thermarum DSM 5069]
Length = 452
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 203/440 (46%), Gaps = 46/440 (10%)
Query: 4 RDSDYGAF---MEKFVLQPSSSAHQL---------PLSGLTFAIKDIFDVDGHVTGFGNP 51
++ D AF ME+ L+ + ++ PL G+ A+KD+ DV G T G+
Sbjct: 40 KNQDLNAFITCMEEQALEEAKEKEKVAKNADFEKQPLLGIPIAVKDLIDVKGVPTTAGSL 99
Query: 52 DWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPG 111
+ + A A V + GA +GKT + E+A + N H+G NP ++ G
Sbjct: 100 FF--KENIAKEDAFVVKLLRKAGAIIVGKTNLHEIALGVTNNNPHFGPCRNPYDKSKISG 157
Query: 112 GSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDT 171
GSS GSAVAV + +LGTDTGGS+R+PA+ CG+ G +P++ VST+GVIP+A D
Sbjct: 158 GSSGGSAVAVATGMALAALGTDTGGSIRIPAALCGVVGLKPTYGVVSTSGVIPLAWHLDH 217
Query: 172 VGWFA---WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKS 228
VG D ++ R+ R D N ++V +V + L +
Sbjct: 218 VGPITSSVEDAHLIFRITRKY----DRNNPYSVTRVY--------------KVKRNLSRL 259
Query: 229 VEKLFGGHIIENV---ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRY 285
+ G IE IL + V+D SL+ G ++ + L L++A L+ +
Sbjct: 260 RVAVAVGEYIEEADQRIL-ELVRDIAKSLEKM---GFSVEQKKLDWLKDLAAANVLMTQV 315
Query: 286 EFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
E H + + G + ER+ + + TS + + +TE + ++ ++
Sbjct: 316 EAATFHKERLLKNPEMFGSDVRERLMQGLNTSGTDYALARKTQTEAKHIFREFFKEYDLI 375
Query: 346 VIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA-GVSGFCQVSIPLGLHDNLPVAISLLA 404
++PT P P ++ + + V AR + + +SG +++P+G D LP + L+A
Sbjct: 376 LLPTTPITAPPIEGENA---VAMARKLTRFTAPFNISGLPALTVPVGFVDGLPAGVQLVA 432
Query: 405 KHGSDGFLLNLVETLHNTLK 424
+ L + + + + +K
Sbjct: 433 SWFEEELLFFVGQKIESIVK 452
>gi|399018226|ref|ZP_10720410.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398101862|gb|EJL92062.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 447
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 188/420 (44%), Gaps = 69/420 (16%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ AAT+ APAV + GA +G+T M E A
Sbjct: 68 LAGLPVSIKDLFDVQGEVTAAGS-KALANAPAATADAPAVARLRHAGAILLGRTNMSEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP NP RV GGS+SG AV V + +LGTDTGGS+R+P+++CG+
Sbjct: 127 FSGLGLNPHYGTPRNPFDEQRVSGGSTSGGAVTVALDMAVAALGTDTGGSIRIPSAFCGL 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ VS G +P++ + D+ G L+ V+ I +
Sbjct: 187 TGFKPTARRVSLQGAVPLSTTLDSAG-----------------PLSRSVDCCAIVDAILS 229
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+ L+ ++P GL FG + D+V D + + E
Sbjct: 230 GEVLETDAVP----LAGL------RFG-------VTDDFVADGMDATVRAAFEA------ 266
Query: 268 SIPSLAALSSAMRLLQRYEFKN-------NHGD---------WVTTVKPDLGPGISERVW 311
+L+ L SA L+QR+ F N G W + +RV
Sbjct: 267 ---ALSRLQSAGALIQRFAFSELKELPSINAGGGFSAAESWAWHRKLLASSADQYDQRVA 323
Query: 312 EAVR-----TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
+R T+A +D+ + + + A L ++PTVP PP +Q + E
Sbjct: 324 VRIRRGSQQTAADYLDLLAARRRII-AQARRRLSVFDAWLMPTVPVVPPLIQALQESDET 382
Query: 367 FRARAFSLLSIAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F A +L V F C +++P D LPV IS+ +HG D +L + + L
Sbjct: 383 FFASNGLVLRNPSVINFLDGCALNLPCPSPDGLPVGISVCGQHGDDARVLAIGRAVEAVL 442
>gi|160896891|ref|YP_001562473.1| amidase [Delftia acidovorans SPH-1]
gi|160362475|gb|ABX34088.1| Amidase [Delftia acidovorans SPH-1]
Length = 456
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 186/405 (45%), Gaps = 32/405 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ GL ++KD+FD+ G T G A TA V + GA +G T M E
Sbjct: 71 PIEGLPVSVKDLFDIAGFPT-LGGSRLLADAPPAQRTAEVVQRLRQAGAVIVGTTNMTEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP NP D R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 130 AYSGLGINPHYGTPRNPWQRDEGGGRIPGGSSSGAAISVTDGMAMAAIGSDTGGSVRIPS 189
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+ GF+P+ VS GV+P++ + D++G A P + R L D + P
Sbjct: 190 ALCGLTGFKPTARRVSMEGVLPLSANLDSIGPLA--PSV-----RCCATL-DAILSGEPL 241
Query: 203 QVIFAEDCLQLSSI-PSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+ A L + P++ V G+ +V + + G ++ V + L++
Sbjct: 242 GELHAAPLQGLRLLAPTNVVLDGMDATVAAAWERALSLLSQAGAHITHVVVAPFGELADI 301
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
N + ++ + + + +H + T + P + R+ SA
Sbjct: 302 NSKGGFTAA------------EAWAWHRHH---IATRLSEYDPRVGTRILRGKDISAADY 346
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ + + AA+SA + DH ++V+PTVP PK+ + E + +L +
Sbjct: 347 IDLLARRRQWIAAVSAQMADHDLIVMPTVPVVAPKIADLTQSDEAYFGANGLILRNPTLI 406
Query: 382 GF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F C +S+P PV +SL G D LL++ + L
Sbjct: 407 NFLDGCAISLPCHRAGEAPVGLSLAGLGGQDRRLLSVALAVEQLL 451
>gi|242240849|ref|YP_002989030.1| amidase [Dickeya dadantii Ech703]
gi|242132906|gb|ACS87208.1| Amidase [Dickeya dadantii Ech703]
Length = 447
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 180/404 (44%), Gaps = 33/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ ++KD+FDV G T G+ R AA+ A V +L GA +GKT M E A
Sbjct: 70 LEGIPVSVKDLFDVSGEPTTAGS-RVLRDVPAASGHAAVVARLLQAGAVVLGKTNMTEFA 128
Query: 88 YSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP NP R+PGGSSSG+AV+V + ++G+DTGGSVR+PA++C
Sbjct: 129 YSGLGLNPHYGTPANPWDRLTRRIPGGSSSGAAVSVADGMCYGAIGSDTGGSVRIPAAFC 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+P+ + AGV+P++ + D+VG A D + V+ + R +Q
Sbjct: 189 GLVGFKPTAQRIDRAGVLPLSTALDSVGVIARDVAGCVALDSVVAHQPLTLKPKRLAQAR 248
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
F +P V L SV F + G + + L L+ N
Sbjct: 249 FV--------VPQTLVLDNLDDSVAAAFDRALSRLSAAGVEIVELPSELLAELASINAGG 300
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVW--EAVRTSAQKIDV 323
+S L+ + + H + + P + R+ EA+ + +
Sbjct: 301 GFSA------------LESWRW---HQALIARRAAEYDPRVLSRIRKGEALGDAQARELA 345
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARAFSLLSIAGV 380
+ V + RAA A +++PTVP P +L D +A A +I
Sbjct: 346 SRRVDWQQRAA--ATWQGFDAVLMPTVPMVAPAIDELAADENAYFAANGLALRNTAIFNF 403
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C +S+P + PV + + HG D LL+ L + L
Sbjct: 404 LDGCAISLPCHRPGDAPVGLMAGSLHGRDDELLSWARELESCLN 447
>gi|338975420|ref|ZP_08630773.1| putative amidase [Bradyrhizobiaceae bacterium SG-6C]
gi|338231490|gb|EGP06627.1| putative amidase [Bradyrhizobiaceae bacterium SG-6C]
Length = 432
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 179/409 (43%), Gaps = 32/409 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
S + + PL G IKD+FDV G VT G+ A A + A V + GA K
Sbjct: 48 SGSSRGPLDGAILTIKDLFDVKGDVTRAGSKVLASRGKPAEADAVIVQRLREAGAVIAAK 107
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T M E AYS G N H+GTP NP RVPGGSSSG+AVA + ++GTDTGGS R+
Sbjct: 108 TNMTEFAYSGLGANPHFGTPGNPADRKRVPGGSSSGAAVAAADAFCEIAIGTDTGGSTRI 167
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ GF+P+ V G P++ + D++G A R + AD
Sbjct: 168 PAAFCGVTGFKPTVKRVPRTGAFPLSFTLDSIGPIA----------RSVADCAD------ 211
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP-SLQHFLS 259
D + +PS V L + G+ I+ L D V P +L S
Sbjct: 212 -------ADAVLAGEMPSPLVPPSLKEVRAGFVQGYPIDG--LDDIVGKAYPQALAKLAS 262
Query: 260 EGNKEQEYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
+ ++ +L + +A + E H + + P + R+ + + S
Sbjct: 263 HWKSGADVTLKALDIMHTANERGGVAPPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKIS 322
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + A + A+ +LV+PTV P + + S E F R L
Sbjct: 323 AADYILALRDRERGIAQMDAVFDQVDVLVMPTVQIVAPTMD-EISTPESFNKRNVQALMN 381
Query: 378 AGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ F C VS+P+ + LPV + L+ +HG D LL + + L
Sbjct: 382 TSIWNFFDVCAVSLPIRFGNALPVGLMLVGRHGDDRRLLAMAAAVEKQL 430
>gi|395794061|ref|ZP_10473397.1| amidase [Pseudomonas sp. Ag1]
gi|395341794|gb|EJF73599.1| amidase [Pseudomonas sp. Ag1]
Length = 375
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 191/401 (47%), Gaps = 48/401 (11%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
SG AIKD D+ G+ T G+ +A AT A V AVL G +GKT + E+A+
Sbjct: 13 SGRRVAIKDSIDIAGYPTRSGSRAFADA-PPATRHAHVVQAVLDAGWQIVGKTSLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CGI
Sbjct: 72 GVTGINDWSGTPVNPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P++ VS G P S D VG A A+ +L+ QVI
Sbjct: 132 GLKPTYGRVSRIGAQPAVSSLDCVGPLA----------------ANMQDLIAAMQVICPG 175
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
Q + PS V G + +V ++K + + + G ++Q
Sbjct: 176 --FQAQAAPSGSVPVGFL-------------DVACEPWLKASL--MAAVDAAGWRQQRLH 218
Query: 269 IPSL-AALSSAMRLLQRYEFKNNHGDWVT----TVKPDLGPGISERVWEAVRTSAQKIDV 323
+ A + + ++ N +W T K +G + +R+ A RTSA +
Sbjct: 219 LDDFDTAFGAGLTVI-------NVENWAAFGHLTGKGLIGADVEQRLLAASRTSAADLAE 271
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
+ V+T + A L + +L++PT+P PP L + + AR L+ +SG
Sbjct: 272 AEVVRTRFSHQVDAALEEFSVLLLPTMPDLPPTLAEARNGSQAV-ARMTPLVRPFNLSGH 330
Query: 384 CQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNTL 423
+++P+ L D+ L V + ++ + G D ++ L L ++
Sbjct: 331 PALTVPVTLADSGLKVGLQIVGRKGQDEWVCALGAQLQQSI 371
>gi|20093308|ref|NP_619383.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina
acetivorans C2A]
gi|23821598|sp|Q8THJ1.1|GATA_METAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|19918666|gb|AAM07863.1| glutamyl-tRNA (Gln) amidotransferase, subunit A [Methanosarcina
acetivorans C2A]
Length = 476
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 190/430 (44%), Gaps = 40/430 (9%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H+ PL+G+ AIKD V G G+ A + +L GA +GKT +
Sbjct: 58 HEGPLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLDAGAVILGKTNL 115
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + E +YG NP +RVPGGSS GSA V A F+LG+DTGGSVR PA+
Sbjct: 116 DEFAMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAA 175
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLV 199
+CG+ G +P++ AVS GV+ A S + VG A + + +++ + + + ++
Sbjct: 176 FCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAILMDVIAGYDRRDSTSIDSK 235
Query: 200 RPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHF 257
Q +D L +P + +G+ VEK I + LG ++ +P++ +
Sbjct: 236 TEYQKALVDDVKGLKIGVPKEFFGEGIHPGVEKAVWNAIHKFESLGATRQEVSMPNINYA 295
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVWEAV- 314
L+ Y I +++ SS + RY F+ N +W V G V +
Sbjct: 296 LA------SYYIIAMSEASSNLARFDGTRYGFRANGENWHAMVSKTRAEGFGTEVKRRIL 349
Query: 315 ------------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---M 359
+ + + V VK + ALS + +L+ PT+P P ++
Sbjct: 350 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSTV----DLLMAPTMPNPAFRIGEKIE 405
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
DP L + +++AGV VS+P G D LPV + ++ K + +L T
Sbjct: 406 DPLTLYLSDVNTCP-INLAGVP---SVSVPCGFTDGLPVGLQIMGKPFDEPTVLRAAYTF 461
Query: 420 HNTLKEELQR 429
+R
Sbjct: 462 EKNTDYHTKR 471
>gi|436834963|ref|YP_007320179.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fibrella aestuarina
BUZ 2]
gi|384066376|emb|CCG99586.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Fibrella aestuarina
BUZ 2]
Length = 480
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 189/430 (43%), Gaps = 62/430 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ IKD+ GH G A TA AV +L+ GA IG+ DE A
Sbjct: 71 LHGMVIGIKDVLSYAGH--GLRAGSHILDGFEAQFTATAVERLLAAGAIIIGRQNCDEFA 128
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
E +G N PDRVPGGSS GSAVAV A L S+G+DTGGSVR PA++CG+
Sbjct: 129 MGSANETSAFGPVRNAANPDRVPGGSSGGSAVAVQAGLCLASIGSDTGGSVRQPAAFCGV 188
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRV--------GRVLLQLADDV 196
G +P++ +S G+I A SFD +G A+D +L V V + D
Sbjct: 189 VGLKPTYGRISRWGLIAYASSFDCIGPIANDAYDAALLLEVMAGPDAFDNTVSQRSVDSY 248
Query: 197 NLV----RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG-GHIIENVILGDYVKDKV 251
+ RP ++ + D + + + + Q ++E+L GH +E V L
Sbjct: 249 STATLPDRPLRIAYLADGVDSEGV-APAIRQATEAAIERLRSQGHRVEPVSLS------- 300
Query: 252 PSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNH--GDWVTTVKPD----LG 303
L+H L Y I + A SS + RY + D V K G
Sbjct: 301 -LLKHLLP------TYYILTTAEASSNLSRFDGVRYGHRTQAPVADLVAMYKQSRTEGFG 353
Query: 304 PGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
P + R+ ++A T AQ+ V+ +R + D+ +L++PT P
Sbjct: 354 PEVRRRILLGTFALSASYYDAYYTKAQQ------VRRLVRDETDRIFADYDLLLMPTTPT 407
Query: 353 PPPKL-QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDG 410
+L + + + + A F++ A V+G+ +S+P G + LP+ + LLA +G
Sbjct: 408 TAFRLGEENDDPVAAYLADIFTVQ--ANVTGYPAISVPNGTDLEGLPIGLQLLAPPFQEG 465
Query: 411 FLLNLVETLH 420
L+ L
Sbjct: 466 LLVATANALE 475
>gi|374369303|ref|ZP_09627337.1| amidase [Cupriavidus basilensis OR16]
gi|373099216|gb|EHP40303.1| amidase [Cupriavidus basilensis OR16]
Length = 444
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +IKD+FDV G VT G+ A + A + AP V + + GA IG+T M E
Sbjct: 71 PLAGLPVSIKDLFDVRGQVTRAGSK--ALGGAPANADAPVVARLRAAGAVLIGRTNMSEF 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP P R+ GGS+SG AV+V + +LGTDTGGS+R+P+++CG
Sbjct: 129 AFSGLGLNPHYGTPRAPFDEARIAGGSTSGGAVSVALDMAVAALGTDTGGSIRIPSAFCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+ GF+P+ S V AG +P++ S D+ G A
Sbjct: 189 LTGFKPTASRVPLAGAVPLSTSLDSAGPLA 218
>gi|389696150|ref|ZP_10183792.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
gi|388584956|gb|EIM25251.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
Length = 432
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 178/406 (43%), Gaps = 34/406 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ +IKD+FDV G T G+ R A A V + GA +GKT M E
Sbjct: 52 PLDGVIVSIKDLFDVAGETTLAGSIAL-RDAPPADKDATIVRRLRQAGAVILGKTNMVEF 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYGTP N P R+PGGSSSG+ V V + S+G+DTGGSVR+PA+ G
Sbjct: 111 AFSGIGLNPHYGTPGNAADPSRIPGGSSSGAGVTVAEGTSEISIGSDTGGSVRIPAALNG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V G P+A S D++G A D + AD + +++
Sbjct: 171 VVGFKPTAHRVPLDGAFPLAPSLDSIGPLARDVQD--------CAFADAIMAGEEPRLLN 222
Query: 207 AEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A + L +P R+ VEK F +L+H G +
Sbjct: 223 AHPLVGLRIGVPRGRLFAQTEPMVEKAFEA-----------------ALKHLSGAGARIV 265
Query: 266 EYSIPSL---AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
++ I L A ++ + E H DW+ ++ P + + + + A
Sbjct: 266 DHGIDDLLEAMADTTVTSSIASIEASEVHADWLEAKVAEIDPRVHWWIARSGKVPAPIYI 325
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL---SIAG 379
+ L AA+ L +L +PT P + + ++++ +L +
Sbjct: 326 RMLRRRRTLVAAMDERLAPLDVLALPTTAISAPLIAPLEADIKLYNKTDDLILRNTTFGN 385
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+S+P+ + PV + L+A+HG D LL++ ++ L +
Sbjct: 386 QFDLTGISLPIPGTER-PVGLMLVARHGHDQRLLDIAASVETMLAQ 430
>gi|344300777|gb|EGW31098.1| hypothetical protein SPAPADRAFT_63024 [Spathaspora passalidarum
NRRL Y-27907]
Length = 459
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 200/442 (45%), Gaps = 72/442 (16%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q PL+G T+ KD T + S +T ++LA G+ IGK+ +D
Sbjct: 44 QGPLAGSTYICKDNIVTKVGFTTSASKSLENYKSPFNATVVSLLA--QAGSKLIGKSNLD 101
Query: 85 EMAYSINGENKHYGTPTNPCAPD-RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
E + N H+G NP PD RVPGGSS GSA AV A L DFSLGTDTGGSVR+PAS
Sbjct: 102 EFGMGSSNTNSHFGPTMNPVYPDQRVPGGSSGGSAAAVAAGLADFSLGTDTGGSVRLPAS 161
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV--LLQLADDVNLVRP 201
YC + GF+PS+ +S GV+P AQ+ DTVG + K LN V +V +L + D+ +
Sbjct: 162 YCSVIGFKPSYGRISRWGVVPYAQTLDTVGIIS---KSLNVVRKVFSVLDVYDEKDPTSL 218
Query: 202 SQVIFAE----DCLQLS-SIPSDRV------------TQGLVKSVEKLFGGHIIENVILG 244
Q I E C QL+ IPS+ V +Q L K E GH I+ +
Sbjct: 219 PQNIRNEFKPSTCKQLTVGIPSEFVLDELSPETRAAWSQALTKLQE---AGHNIKPI--- 272
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ-RYEFKNNHGDW-------VT 296
+K SL + Y++ + A S+ R RY + NN+ V+
Sbjct: 273 -SIKSITKSLPAY---------YTLATAEAASNLSRYDGVRYGYNNNNQHTKDAMNLIVS 322
Query: 297 TVKPDLGPGISERV----WEAVRTSAQKIDVCQSVKTELRAALSALL-----------GD 341
LGP + R+ + S V+ EL S+L GD
Sbjct: 323 NRSESLGPEVQRRIILGNYTLSSDSGDHYLKATKVRQELVEEFSSLFKTKHALVETASGD 382
Query: 342 HGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPV 398
+++ PT G P ++ ++ + +L++ A ++G +SIP G +
Sbjct: 383 CDLMISPTSIGEAPTVEEFLNADNANFLNSYVNDILTVPASLAGIPAISIPFG-----KL 437
Query: 399 AISLLAKHGSDGFLLNLVETLH 420
I L+ + G D +L + ETL
Sbjct: 438 GIQLMGQFGDDELVLQVAETLQ 459
>gi|270264918|ref|ZP_06193182.1| amidase [Serratia odorifera 4Rx13]
gi|270041216|gb|EFA14316.1| amidase [Serratia odorifera 4Rx13]
Length = 449
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 185/413 (44%), Gaps = 53/413 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ ++KD+FDV G T G+ A +AA A V +L GA IGKT M E A
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLAAAPAAAKHAA-VVERLLQAGAVLIGKTNMTEFA 128
Query: 88 YSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP NP A R+PGGSSSG+AVAV + S+G+DTGGSVR+PA++C
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+P+ ++ G++P++ S D++G A D
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHD--------------------------- 221
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP-----SLQHFLSE 260
C+ L + +DR Q +K++ + + ++ D + ++V SLQ
Sbjct: 222 -VAGCIALDAAITDRPLQPQLKNLSQ--ARFAVPQTLVLDGLDEEVAAGFRFSLQRLAQA 278
Query: 261 GNKEQEYSIP-----SLAALSSA--MRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
G Q +IP LAA+++A L+ + + H + + P + R+
Sbjct: 279 G--AQIETIPCTEFAELAAINAAGGFSALESWRW---HQALIAEHAEEYDPRVLSRIRRG 333
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRAR 370
+ Q + + + ++A + L++PTVP P +L+MD A
Sbjct: 334 QPLGEGDLQQLQQQRADWQRRVTAAVQAFDALLMPTVPLVAPTVAELEMDEEAYFRINGA 393
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
A S+ C +S+P PV + L D LL + L
Sbjct: 394 ALRNPSVINFLDGCALSLPCQRPGGAPVGLMLAGLPMHDEALLGWALAIERCL 446
>gi|91976358|ref|YP_569017.1| amidase [Rhodopseudomonas palustris BisB5]
gi|91682814|gb|ABE39116.1| Amidase [Rhodopseudomonas palustris BisB5]
Length = 463
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 189/418 (45%), Gaps = 59/418 (14%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P +G+ +IKD+FD+ G VT G+ + A + APAV + G IG+T M E
Sbjct: 84 PFAGIPISIKDLFDIKGQVTRAGSRAL-DDNPPAEADAPAVARLRRAGFVVIGRTNMTEF 142
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP D VPGGSSSG+AV+V + LGTDTGGS R+PA++
Sbjct: 143 AYSGIGINPHYGTPKAAFNRDAGHVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRIPAAF 202
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW-------------DPKILNRVGRVLLQ 191
GI G++PS V G +P++ S D++G A D I+ R L
Sbjct: 203 NGIVGYKPSQHRVPRDGAVPLSFSLDSIGPLARSVDCCAVLDAVLADAPIVPLAPRSLKG 262
Query: 192 LADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG-GHIIENVILGDYVKDK 250
L L P+ V E D V+ ++++ L G G IIE + L +++ D
Sbjct: 263 L----RLAVPTTVALDE--------LDDAVSVAFERALKTLSGHGAIIEKIELPEFL-DV 309
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISER 309
P +++G AA S Y + ++ + D+ P + ER
Sbjct: 310 AP----MMAKGG---------FAAAES-------YAWHR----YLIVAQGDVYDPRVRER 345
Query: 310 VWEA-VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEV 366
+ +++A +D+ + K+ L A A L + LV+PT PPK+ D A
Sbjct: 346 ILRGETQSAADYVDLITARKS-LIARACARLAPYDALVMPTTANTPPKIADLADDKAFTK 404
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
A ++ + C +S+P PV + L +G+D + + +L ++
Sbjct: 405 ANLLALRNCTLINMIDGCAISLPCHRDGEAPVGLMLAGVNGADREIFEIAASLEMVVR 462
>gi|329115689|ref|ZP_08244411.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
gi|326695117|gb|EGE46836.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
Length = 453
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 54/416 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD+FD G +T G+ A A+ APA+ + G SIG+T M E
Sbjct: 71 PLAGLPISVKDLFDEAGSITRAGSMVLADA-PPASMDAPAIERLKQAGLISIGRTTMTEF 129
Query: 87 AYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N H+GTP NP +PGGSSSG+A++V + +G+DTGGS R+PA+
Sbjct: 130 AFSGIGINPHFGTPANPWHRHEKHIPGGSSSGAAISVSDNMAFVGIGSDTGGSCRIPAAL 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ GF+P+ +ST G +P++ + D++G +GR V +
Sbjct: 190 TGLVGFKPTARRISTKGTVPLSSTLDSIG----------SIGRT-------VKCCWATDS 232
Query: 205 IFAEDCLQLSSIPSDR---------VTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQ 255
+ A L++ P+ R ++ +++ ++ H EN L K+ + L+
Sbjct: 233 LMATGTLRIQDAPTGREGSTLRLGILSTSVMEDMDDTV-AHTWENC-LRRLSKNGI-MLE 289
Query: 256 HFLSEGNKE-----QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
F KE + P+ +L+ LL+R+ + P + +R+
Sbjct: 290 TFTCPPLKEIPQANSKGGFPAAESLAWHQPLLERH-------------RSVYDPFVLQRI 336
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
+A + +T+L + ++ + +++PTVP PK+ D + A
Sbjct: 337 LRGYEQNAVDYISLRQSRTKLIQQAADIMNHYDAVILPTVPIIAPKIS-DMHDNTRYVAT 395
Query: 371 AFSLL---SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
LL +IA C +S+P PV + ++ +H D L + + + L
Sbjct: 396 NLLLLRNTTIANFLDLCAISLPCHQMGEAPVGLMVMGRHAEDHILFRIAAQIEHIL 451
>gi|311743177|ref|ZP_07716985.1| probable glutamyl-tRNA(Gln) amidotransferase, subunit A
[Aeromicrobium marinum DSM 15272]
gi|311313857|gb|EFQ83766.1| probable glutamyl-tRNA(Gln) amidotransferase, subunit A
[Aeromicrobium marinum DSM 15272]
Length = 405
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 163/385 (42%), Gaps = 45/385 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+ D+ V G G G+P T + T AP V ++L+ GA+ G +DE+
Sbjct: 51 PLDGMALAVSDMVAVAGQRRGLGHPVRVATSAPETDHAPVVASLLAAGASVRGIAQIDEL 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
++ G N H G TNP APDR+ GG++ G+A AV LGTDT G +RVPA+Y G
Sbjct: 111 GNALTGTNPHVGATTNPRAPDRLAGGANCGAAAAVALGHAQVGLGTDTVGCLRVPAAYQG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++ RP+ V +G ++ SFDTVGW + L RVG LL
Sbjct: 171 LWSMRPTQGVVDASGATNLSPSFDTVGWVTAGVESLARVGATLL---------------- 214
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
P+D T G +++ IL D+V + L E
Sbjct: 215 ----------PADVAT----------VSGLVVDPAILA-AADDQV---REVLDPAMVGLE 250
Query: 267 YSIPSLAALSSAMRLLQRY---EFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ L A +A+ Q E HG WV +G + R A
Sbjct: 251 HWDSGLLATDAALHAFQTVVAAEAWQVHGRWVEEHADAIGADVGARFRHAASVDPVWTRR 310
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
E R + L + +LV+PT P P L D L R L +AG+ G
Sbjct: 311 STEQVAEWRHLIRTALAEQ-VLVVPTAPTVAP-LVRDADHLPALRRATIRLTCLAGLGGL 368
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGS 408
VS+PL +PV +SL+ GS
Sbjct: 369 PTVSVPLSTTAGVPVGLSLVGPAGS 393
>gi|378729632|gb|EHY56091.1| glutamyl-tRNA (Gln) amidotransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 632
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 191/441 (43%), Gaps = 54/441 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL FA+KD V G TG+GN W H TAP + +L GA +GK E
Sbjct: 174 PLAGLRFAVKDTISVKGTRTGYGNQAWREIHDPEKKTAPCIKLLLQAGAVLVGKLKTTEF 233
Query: 87 AYSIN-GENKHYGTPTNPCAPDR-VPGGSSSGSAVAVGA-KLVDFSLGTDTGGSVRVPAS 143
A ++ E P NP R P SS+GSAVA A +DF++GTDTGGS+R PA
Sbjct: 234 AEGLDPNEWIDDDCPYNPRGDGRQKPSSSSTGSAVAAAAYDWIDFTVGTDTGGSIRHPAG 293
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ---------LAD 194
G++G RPSH +S GV+ F+T+G FA I RVG L+ +
Sbjct: 294 VNGVYGQRPSHGLISLEGVLGATDLFNTIGIFARHASIFARVGAHLVHPTRTAFCTPIEP 353
Query: 195 DVNLVRPSQVIFAEDCLQLSSI-------PS---------DRVTQGLVKSVEKLFGGHII 238
NL+ P++ A D S+ PS ++ + +++ +E I
Sbjct: 354 KYNLLYPTRAAQAADMNPTPSVQHRLFPHPSADVSSWTEAEKQIEAVMRKLEITLDCERI 413
Query: 239 ENVILGDYVKDKVPSLQ-HFLSEGNKEQEYSIPSLAALSSAM-RLLQRYEFKNNHGDWVT 296
L + + P Q L + +I + +A+ + + Y KN+
Sbjct: 414 P-FNLNELWEATPPIGQPRSLDQAAGHIYSTITTASAVHGCLDDFIHDYSAKND------ 466
Query: 297 TVKPDLGPGISERVWEAVRTSAQKI-DVCQSVKTELRAALSALLGDHG-----ILVIPTV 350
P + +S R+ SA++I D +++++ S + G + +L+ P
Sbjct: 467 GRPPRISELVSRRLEHGRSASAERISDALKAMQSFRTWTESTIFGSYDQNATTLLIFPQC 526
Query: 351 PGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLG----------LHDNLPVAI 400
G P E+F FS+ S + G +IP+ + LPV+I
Sbjct: 527 YGRPDYRHETSDRAELFN-DTFSIYSFGYLVGCPDYTIPVAEVPYLSAVTNTIEYLPVSI 585
Query: 401 SLLAKHGSDGFLLNLVETLHN 421
SL+ GSD L N++ +LH
Sbjct: 586 SLIGPPGSDLELFNVIASLHK 606
>gi|94985452|ref|YP_604816.1| amidase [Deinococcus geothermalis DSM 11300]
gi|94555733|gb|ABF45647.1| Amidase [Deinococcus geothermalis DSM 11300]
Length = 395
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 195/443 (44%), Gaps = 70/443 (15%)
Query: 1 MASRDSDYGAFMEKFVLQPSS---SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTH 57
M +RD + + P+S PL GL F++KD++ + G P A T
Sbjct: 1 MPTRDFPFSDPQRAWAYLPASPLLGEASGPLWGLNFSVKDLYGMAGW------PLTASTR 54
Query: 58 SAATSTAPAVLA--VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSS 115
++ +VL +L GA ++GKT + E+A I G N GT +P P RVPGGSSS
Sbjct: 55 ASVPDPGESVLVRRLLGLGACAVGKTHLHEIALGITGMNGFGGT-LHPFDPARVPGGSSS 113
Query: 116 GSAVAV-----GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPS--HSAVSTAGVIPMAQS 168
G+AV+V G VDF+LGTDTGGS+RVPA++CG+ G++P+ H A ST GV+P++ +
Sbjct: 114 GAAVSVALGQVGETKVDFALGTDTGGSIRVPAAWCGVVGYKPTGGHPAWSTEGVLPLSTT 173
Query: 169 FDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKS 228
D G A D + + RV Q A V P + L L S DR V+
Sbjct: 174 CDHAGPLARDVRTVVRV-----QEALTGRPVVPQEWTGVNVGLWLPSGWVDRT----VRE 224
Query: 229 VEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFK 288
+L+ + E LG +V++ S P + S + L E
Sbjct: 225 AVRLYAARLEE---LGAWVEN-----------------VSFPEVLDAYSPIVL---SEAA 261
Query: 289 NNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIP 348
H + +P P + + + ++++ + RA L LL +L+ P
Sbjct: 262 RVHRQALEQAEPGFLPFTLAALRQGQALTEEEVEAAFDRRAAYRAQLDDLLSRFDVLLAP 321
Query: 349 TVPGPPPKLQMD---------PSALEVFRARA-FSLLSIAGVSGFCQVSIPLGLHDNLPV 398
VP PPP + D P V R A FSLL + V+ S P V
Sbjct: 322 AVPTPPPLIGQDEVEVGEGRLPLRRAVLRLTAPFSLLGVPTVA--LPSSAPF-------V 372
Query: 399 AISLLAKHGSDGFLLNLVETLHN 421
+ L+ + D LL L TL
Sbjct: 373 GVQLVGRPDEDDRLLGLALTLEG 395
>gi|315499521|ref|YP_004088324.1| amidohydrolase, atze family [Asticcacaulis excentricus CB 48]
gi|315417533|gb|ADU14173.1| amidohydrolase, AtzE family [Asticcacaulis excentricus CB 48]
Length = 440
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 177/402 (44%), Gaps = 44/402 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH---SAATSTAPAVLAVLSGGATSIGKTIM 83
PL+G+ FA+KD+FDV G VT G AR H AA+ A V + + GA IG M
Sbjct: 63 PLAGVPFAVKDLFDVAGQVTTAG----ARLHLGAPAASEDAEVVRRLKAAGAILIGTLNM 118
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE AY N H+GT NP P R+ GGSS GSA AV A V SLG+DT GSVRVPAS
Sbjct: 119 DEFAYGFATVNAHFGTTQNPHDPARLAGGSSGGSAAAVAAGFVPLSLGSDTNGSVRVPAS 178
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CG++G RP+ AV GV P ++ DTVG FA + L R+ VL
Sbjct: 179 LCGVWGMRPAQGAVPLNGVFPFVEALDTVGPFARGSRDLRRLYEVL-------------- 224
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
A + L S P RV + ++ + + V ++ ++
Sbjct: 225 ---AGETLTGGSEPL-RVAR--------------LDGFFARNAAPEAVNAVDTVMTYLGS 266
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+P A SA ++ H D + D P + +R+ A +D
Sbjct: 267 RAIADLPQAEAGRSAGFVMTAALGGALHLDTLRARAQDYDPAVRDRLIAGAMLPAAVLDK 326
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG---- 379
+ R L +L+ P P P P ++ ++ A A + L I
Sbjct: 327 ALRYRDHYRRIFYQLFDQFDVLIAPATPCPAPLIEAGTILIDGKPAPARAHLGIYAQAIS 386
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++G ++ PL H LP+ + ++ + G +G + L+ L +
Sbjct: 387 LAGVPVIAAPLKTH-GLPIGLQIIMRPGLEGAVFGLMHQLED 427
>gi|404319588|ref|ZP_10967521.1| amidase [Ochrobactrum anthropi CTS-325]
Length = 443
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 179/403 (44%), Gaps = 42/403 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GLT +K FD +G VT G+ + + A+++A V + GGAT + +T M E
Sbjct: 68 PLAGLTMTVKACFDTEGWVTSCGSKAL-QEAAPASASAALVRRLRMGGATLLAQTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPCAP--DRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AY G N H+GTP P P + + GGSSSG+AVAV DF++ +DT GS R+PA++
Sbjct: 127 AYGALGVNTHFGTPRTPLDPAGEAIAGGSSSGAAVAVARGYSDFAICSDTSGSARIPAAF 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS T G+ ++ SFD P I++ +L DDV P++
Sbjct: 187 CGVVGFKPSRGRYETDGMHWLSTSFDV-------PGIIS-TSVAHCRLIDDVATGIPARK 238
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLSEGNK 263
++L ++P L +VE LFG G V+D ++PSL
Sbjct: 239 PRRSKQIRL-AVPRLLSETALDNTVEDLFGACRSALEATGIVVQDIELPSLIE------- 290
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA----Q 319
+ A+ M + Y H + + P + R+ + A
Sbjct: 291 ------SARIAVDGGMIGAEAYAL---HRERLAVDFDSYDPLVGTRIQKGRENPAYLYVN 341
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM--DPSALEVFRARAFSLLSI 377
++ + + + A + G ++PTVP PP L D RAFSL
Sbjct: 342 ALNALAACREQFDAEIEGFDG----FILPTVPMLPPALATLADEETYLALNRRAFSLTEF 397
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
A +S+P+G H P + L G D LL + E L
Sbjct: 398 ANRLDLPSISLPIGKH---PAGLMLTGLRGEDETLLAIAEVLE 437
>gi|153010121|ref|YP_001371335.1| amidase [Ochrobactrum anthropi ATCC 49188]
gi|151562009|gb|ABS15506.1| Amidase [Ochrobactrum anthropi ATCC 49188]
Length = 443
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 179/403 (44%), Gaps = 42/403 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GLT +K FD +G VT G+ + + A+++A V + GGAT + +T M E
Sbjct: 68 PLAGLTMTVKACFDTEGWVTSCGSKAL-QEAAPASASAALVRRLRMGGATLLAQTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPCAP--DRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AY G N H+GTP P P + + GGSSSG+AVAV DF++ +DT GS R+PA++
Sbjct: 127 AYGALGVNTHFGTPRTPLDPAGEAIAGGSSSGAAVAVARGYSDFAICSDTSGSARIPAAF 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS T G+ ++ SFD P I++ +L DDV P++
Sbjct: 187 CGVVGFKPSRGRYETDGMHWLSTSFDV-------PGIIS-TSVAHCRLIDDVATGIPARK 238
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLSEGNK 263
++L ++P L +VE LFG G V+D ++PSL
Sbjct: 239 PRRSKQIRL-AVPRLLSETALDNTVEDLFGACRSALEAAGIVVQDIELPSLIE------- 290
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA----Q 319
+ A+ M + Y H + + P + R+ + A
Sbjct: 291 ------SARIAVDGGMIGAEAYAL---HRERLAVDFDSYDPLVGTRIQKGRENPAYLYVN 341
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM--DPSALEVFRARAFSLLSI 377
++ + + + A + G ++PTVP PP L D RAFSL
Sbjct: 342 ALNALAACREQFDAEIEGFDG----FILPTVPMLPPALATLADEETYLALNRRAFSLTEF 397
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
A +S+P+G H P + L G D LL + E L
Sbjct: 398 ANRLDLPSISLPIGKH---PAGLMLTGLRGEDETLLAIAEVLE 437
>gi|37526114|ref|NP_929458.1| hypothetical protein plu2200 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785544|emb|CAE14493.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 447
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 180/403 (44%), Gaps = 51/403 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD FD+ G VTG G +++ A TAP V +L G GK E+
Sbjct: 71 PLHGIPFAVKDFFDLKGKVTGGGTNCFSQ---KAYVTAPVVATLLKQGMILTGKHRAVEL 127
Query: 87 AYSINGENKHYGTPTNPCAPDR--VPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
G ++ TP NP + PGGSS+GSAVAV A L +L TDTGGS R+PA++
Sbjct: 128 GMGATGIMENSPTPLNPWGQSQRVAPGGSSNGSAVAVAAGLTPIALVTDTGGSARIPAAW 187
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GFRPS +S++G++P++Q+ DTVG A K + + V QL + NL S +
Sbjct: 188 CGVSGFRPSMGNLSSSGMLPLSQTMDTVGIIA---KHASDIFIVYNQL--NPNLAYHSCI 242
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ L + +PS+ ++K G H V L+ F G
Sbjct: 243 ----NNLNIGILPSEEYI------LDKETGLHY-------------VSLLEVFSQMGMVT 279
Query: 265 QEYSIPS-LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
Q+ P L+ A ++ +E N+G ++ + L I R+ ++
Sbjct: 280 QKKPFPYPLSQCMKANSIITAFEAWQNYG-YLCNSQNSLSDTIKVRLERGKEIKEKEYSE 338
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPP-PKLQMD----PSALEVFRARAFSLLSIA 378
+R S + LVIPT P P P + D P+ F
Sbjct: 339 ALIFCRHVRKIFSNWFQNVDALVIPTTPEPSWPIAEKDEHQPPNDFTRF----------V 388
Query: 379 GVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLH 420
+ C VSIP GL+ LP ++ ++ + L L E +
Sbjct: 389 NFADLCAVSIPTGLNSQGLPFSLQIVCNRKKEKNALALAELIE 431
>gi|452209812|ref|YP_007489926.1| Aspartyl-tRNA amidotransferase subunit A [Methanosarcina mazei
Tuc01]
gi|452099714|gb|AGF96654.1| Aspartyl-tRNA amidotransferase subunit A [Methanosarcina mazei
Tuc01]
Length = 475
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 191/430 (44%), Gaps = 40/430 (9%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H+ PL+G+ AIKD V G G+ A + +LS GA +GKT M
Sbjct: 57 HEGPLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLSAGAVILGKTNM 114
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + E H+G NP +RVPGGSS GSA V A F+LG+DTGGSVR PAS
Sbjct: 115 DEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAS 174
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL--LQLADDVNLVRP 201
+CG+ G +P++ AVS GV+ A S + VG A + + + + V+ D ++
Sbjct: 175 FCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAVLMDVIAGYDRRDSTSIDSK 234
Query: 202 SQVIFA--EDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIE-NVILGDYVKDKVPSLQHF 257
++ + A +D L +P + +G+ VEK I + + + + +P +++
Sbjct: 235 TEYLKALVDDVKGLKIGVPKEFFGEGIHPDVEKAVWDAIHKCESLEATWEEVSMPHIKYA 294
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVWEAV- 314
L+ Y I +++ SS + RY F+ +W V G V +
Sbjct: 295 LA------SYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKRRIL 348
Query: 315 ------------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---M 359
+ + + V VK + ALS + +L+ PT+P P K+
Sbjct: 349 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKV----DLLMAPTMPNPAFKIGEKIE 404
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
DP L + +++AGV +S+P G D LP+ + ++ K + +L T
Sbjct: 405 DPLTLYLSDINTCP-INLAGVP---SISVPCGFTDGLPIGLQIMGKPFDEETVLRAAYTF 460
Query: 420 HNTLKEELQR 429
+R
Sbjct: 461 EKNTDYHTKR 470
>gi|386396705|ref|ZP_10081483.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
gi|385737331|gb|EIG57527.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
Length = 449
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 184/408 (45%), Gaps = 43/408 (10%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G+ +IKD+FD+ G VT G+ + S A AP V + G IG+T M E AY
Sbjct: 72 AGIPVSIKDLFDIKGQVTRAGSRALDDS-SPAEQDAPTVARLRKAGFVVIGRTNMTEFAY 130
Query: 89 SINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
S G N HYGTP A VPGGSSSG+AV+V + +LGTDTGGS R+PA+Y G
Sbjct: 131 SGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRIPAAYNG 190
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV-- 204
I G++P+ V G +P++ S D++G A + VL + + ++P V
Sbjct: 191 IVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLAN--EPIAPLKPRPVKG 248
Query: 205 --IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH--IIENVILGDYVKDKVPSLQHFLSE 260
+ + L + D G + K H IIE + + ++ H +
Sbjct: 249 MRLAVPTTIALDDL--DAAVAGTFERALKTLADHGAIIERIEMAEF---------HDIGP 297
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERVWEA-VRTSA 318
N + ++ +S RY + T K D+ P +S R+ +++A
Sbjct: 298 MNAKGGFA-------ASESYAWHRY---------LLTSKGDVYDPRVSVRIMRGEAQSAA 341
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLS 376
ID+ ++ L A ++A + + LV+PT PPK+ D A RA +
Sbjct: 342 DYIDLLNERRS-LIARVNARIAPYDALVLPTTANTPPKIADLADDKAFTRENLRALRNCT 400
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ + C +S+P +PV + L GSD + L + ++
Sbjct: 401 LINMIDGCAISLPAHREGEIPVGLMLAGAGGSDRRIFELAAGMEAVIR 448
>gi|118592419|ref|ZP_01549811.1| indole acetimide hydrolase [Stappia aggregata IAM 12614]
gi|118435077|gb|EAV41726.1| indole acetimide hydrolase [Stappia aggregata IAM 12614]
Length = 472
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 191/406 (47%), Gaps = 30/406 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ + KD +V G+ T G P A S AP + GA + GK M E+
Sbjct: 69 PLHGVPVSFKDNINVLGYRTTAGTPGMRDFRPA--SDAPVARRLRQAGAVAFGKNNMHEL 126
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N +G NP P+ V GGSS GSA AV ++V S+GTDTGGSVR+PA++CG
Sbjct: 127 AYGTTTNNALFGPARNPFDPNLVCGGSSGGSACAVAHRMVPASIGTDTGGSVRIPAAFCG 186
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD--DVNLVRPSQV 204
++G+RPS TAG++P++Q+ DT G A P LN + +++ ++ +++R ++
Sbjct: 187 LWGYRPSSGRWPTAGIVPISQTRDTPGPIARTPADLNLLDSLVVGFSEVPKPDMIRDLRI 246
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A+ + ++ + +++ ++ + G +++ V D+ H S N
Sbjct: 247 GIAKFFWDTADADVVKICEEVLEQLQTM--GAVVK------VVDDRSLVAPHIASTSNIA 298
Query: 265 QEYSIPSLAALSSAMRLLQRYE--FKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+L + + +E ++ D V ++ D +S A A+ +
Sbjct: 299 HYEGRVALEEFLEIYNVGRSFEAVARSVASDGVRSILMD---QLSAETMVAAEIYAEAVR 355
Query: 323 VCQSVKTELRAALSALLGDHGI--LVIPTVPGPPPKLQMDPSAL------EVFRARAFSL 374
V + EL+ + + D+ I L PT PPP + D + + +F A +
Sbjct: 356 VH---RPELQNSYRRIFRDNSIDVLAFPTSLIPPPHIGDDETVILNGKDVPLFTASIHN- 411
Query: 375 LSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETL 419
+ +G +++P GL +PV +S A G+D LL++ L
Sbjct: 412 TDVGSNAGLPGITLPAGLIAGRIPVGLSFDAAAGADRLLLDIALCL 457
>gi|302881703|ref|XP_003039762.1| hypothetical protein NECHADRAFT_50177 [Nectria haematococca mpVI
77-13-4]
gi|256720629|gb|EEU34049.1| hypothetical protein NECHADRAFT_50177 [Nectria haematococca mpVI
77-13-4]
Length = 627
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 184/432 (42%), Gaps = 66/432 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ IKDIF+V G T GN W + AA TAPAV +L GA +GK +
Sbjct: 202 PLAGVRLGIKDIFNVQGLKTSNGNRAWYNLYPAANRTAPAVQNLLDAGAVIVGKMKTSQF 261
Query: 87 AYSINGENK-----HYGTPTNPCAPD-RVPGGSSSGSAVAVGAK-LVDFSLGTDTGGSVR 139
A NGE+ Y P NP + P SS+G A V A +D +LG+DTGGS+R
Sbjct: 262 A---NGESATADWVDYHAPFNPRGDGYQDPSSSSAGPAAGVAAYPWLDIALGSDTGGSIR 318
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
P+ GI+G RPSH VS +P++ FDT G F+ DP +
Sbjct: 319 SPSQVQGIYGNRPSHGLVSLGDTMPLSPHFDTAGLFSRDPALWKTA-------------- 364
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
+Q ++ + S PS+ +T G E N+IL ++ + L +
Sbjct: 365 --AQALYGTNISLNDSYPSNILTIGFPTQAESEL------NIILTQFLANLTDFLSAKAT 416
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYE--------------FKNNHGDWVTTVKPDLGPG 305
N E+ ++ + +A S + L YE F ++G +P + P
Sbjct: 417 PFNLEERWNSTNPSAPSVSTLLNNTYEIVSAKEQARLVRDPFFRDYGAAHDGRRPHVNPA 476
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALL-------GDHGILVIPTVPGPPPKLQ 358
R W S ++ + KT+ + + H +LV VP P +
Sbjct: 477 PLNR-WAFGDNSTATVEQGIANKTQFMEWFNTRILSHDAKSCSHNLLVY--VPRTPVPVY 533
Query: 359 MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLG---LH-------DNLPVAISLLAKHGS 408
D +AFS I+ +S + +P+G H + LPV + ++A G
Sbjct: 534 RDTYRTGPQVPKAFSTSRISVMSETPDMVVPIGQVAYHSSITSHTEYLPVTVDMMAAKGC 593
Query: 409 DGFLLNLVETLH 420
DG L +LV+ L+
Sbjct: 594 DGMLFSLVQHLY 605
>gi|312960888|ref|ZP_07775393.1| pyrazinamidase/nicotinamidase [Pseudomonas fluorescens WH6]
gi|311284546|gb|EFQ63122.1| pyrazinamidase/nicotinamidase [Pseudomonas fluorescens WH6]
Length = 366
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSA-ATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
G T AIKD DV G T G+ A H+ A A V A+L G IGKT++ E+A+
Sbjct: 14 GRTVAIKDSLDVAGWPTRCGSR--AFEHAPPAQDHATVVEALLDDGWQIIGKTVLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N+ GTP NP APDR+PGGSSSGSAV V VD +LGTDTGGSVR+PA+ CG+
Sbjct: 72 GVTGINEWAGTPVNPQAPDRIPGGSSSGSAVIVAQGNVDVALGTDTGGSVRMPAACCGVL 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWD 178
G +PS +S GV P + S D VG A D
Sbjct: 132 GLKPSFGRLSRHGVYPASSSLDVVGPMARD 161
>gi|170750954|ref|YP_001757214.1| allophanate hydrolase [Methylobacterium radiotolerans JCM 2831]
gi|170657476|gb|ACB26531.1| allophanate hydrolase [Methylobacterium radiotolerans JCM 2831]
Length = 601
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 180/410 (43%), Gaps = 31/410 (7%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P +PL G+ FA+KD DV G T PD+A T + TAPAV + + GA I
Sbjct: 57 PPFDPATMPLWGVPFAVKDNIDVAGLPTTAACPDFAHTPA---ETAPAVARLRAAGAILI 113
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT +D+ A + G Y P N P VPGGSSSGSAVAV +V F+LGTDT GS
Sbjct: 114 GKTNLDQFATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGIVAFALGTDTAGSG 173
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
RVPA+ + G +PS A+S+ G++P ++ DT+ FA + RV+L
Sbjct: 174 RVPAALNNVVGLKPSLGAISSRGMLPACRTLDTLSVFAGTVADADAAFRVMLGPDGADPW 233
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
R V A L P R+ GL + FGG + V D + +L
Sbjct: 234 SRALPVPAAPAGLP----PGLRL--GLPDAASLRFGGDGLSEAAFAATVAD-LETLAGAA 286
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTS 317
+ + +++ +L L + +RY V +P+ L P + A R S
Sbjct: 287 APVDLAPMFAVAAL--LYDGPWVAERYAAIRA----VMETRPEILHPTTRTVIAAAERHS 340
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDP----SALEVFRARA 371
A LR A+ +L +PT P P L DP S L +
Sbjct: 341 AADAFAGLYRLAALRREADAVWDRIDVLAVPTYPRPQTCAALAADPIGPNSELGTY---- 396
Query: 372 FSLLSIAGVSGFCQVSIP-LGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
+ + +C +++P D P I+LLA GSDG L L LH
Sbjct: 397 ---TNFVNLLDWCALAVPGRPRADGFPAGITLLAPRGSDGLLAALGARLH 443
>gi|294055598|ref|YP_003549256.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221]
gi|293614931|gb|ADE55086.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221]
Length = 574
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
SS LPL G+ FAIKD D+ T + T +AP V +L GA +G
Sbjct: 58 SSDPSTLPLYGIPFAIKDNIDLACVPTTAACEAYGYTPEL---SAPVVEKLLQAGAIPMG 114
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT +D+ A + G YG P NP APDRVPGGSSSGSAVA+ LV FSLGTDT GS R
Sbjct: 115 KTNLDQFATGLVGVRSPYGVPRNPIAPDRVPGGSSSGSAVALSEGLVSFSLGTDTAGSGR 174
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
VPA + ++G +PS +ST+GV+P ++ D V FA
Sbjct: 175 VPAMFNKLWGLKPSRGRLSTSGVVPACRTLDCVSIFA 211
>gi|411119354|ref|ZP_11391734.1| amidohydrolase, AtzE family [Oscillatoriales cyanobacterium JSC-12]
gi|410711217|gb|EKQ68724.1| amidohydrolase, AtzE family [Oscillatoriales cyanobacterium JSC-12]
Length = 510
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ F +KD+FD+ G +T G+ A S AT A + + GA +G MDE
Sbjct: 111 PLAGVPFGVKDLFDIAGVITLAGSKINAE-RSPATQDATLITRLKQAGAILVGAQNMDEY 169
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP P R+ GGSS GS AV + +V FSLG+DT GS+RVP+++CG
Sbjct: 170 AYGFVTENSHYGPSRNPHDPTRMTGGSSGGSVAAVASGMVPFSLGSDTNGSIRVPSAFCG 229
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV---RPSQ 203
IFG +P++ +S A P S D +G FA + + + LLQ AD + V RP Q
Sbjct: 230 IFGLKPTYGRLSRARTYPFVGSLDHLGPFARSVRDIALIFD-LLQGADPDDPVCSKRPPQ 288
Query: 204 VIFAE 208
E
Sbjct: 289 PCLPE 293
>gi|339021337|ref|ZP_08645440.1| amidase [Acetobacter tropicalis NBRC 101654]
gi|338751567|dbj|GAA08744.1| amidase [Acetobacter tropicalis NBRC 101654]
Length = 449
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 189/444 (42%), Gaps = 58/444 (13%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQL-----------PLSGLTFAIKDIFDVDGHVTGFG 49
+ RDS Y + + +A L PL+G+ F +KD+FD++G VT G
Sbjct: 28 LKERDSSYNCVTKVLETRALQTAKDLDARIARGDTVGPLAGVPFGVKDLFDLEGQVTTAG 87
Query: 50 NPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRV 109
+ AT A V + + GA + MDE AY EN HYGT NP P R+
Sbjct: 88 SVVL-NNSPPATRDAEVVQRLCAAGAIPVASLNMDEFAYGFATENAHYGTTRNPHDPQRL 146
Query: 110 PGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSF 169
GGSS GSA AV A L+ F+LG+DT GS+RVPAS CG++G RP+ V AGV P A S
Sbjct: 147 AGGSSGGSAAAVAANLLPFTLGSDTNGSIRVPASLCGVWGLRPTQGLVPLAGVYPFACSL 206
Query: 170 DTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV 229
D +G FA + + V VL+ + + D LS V +
Sbjct: 207 DVIGPFAQNVADIRSVSEVLIG----------QSLAYKGDVSALS-----------VGIL 245
Query: 230 EKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKN 289
+ F + V G + + Q ++P +A +A ++ E N
Sbjct: 246 DGWFAQDLTSGVAAG---------MSAIQAACQHTQTITLPEVARARAASFVITAAEGGN 296
Query: 290 NHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
H + + P +R+ + + Q V+ R + ILV P
Sbjct: 297 LHLNRLKVEPMAYDPATRDRLMAGALLPSAAVIQAQRVRNWFREIMHEAFRKVDILVAPA 356
Query: 350 VPGPPPKLQMDPSAL---EVFRARA----FSL-LSIAGVSGFCQVSIPLGLHDN----LP 397
GP P+L P+ + + ARA F+ LS+AG+ +S PL ++ LP
Sbjct: 357 TVGPAPRLD-QPTIMVGGKAVSARANLGLFTQPLSLAGMP---VLSAPLSPGNDVDTPLP 412
Query: 398 VAISLLAKHGSDGFLLNLVETLHN 421
+ + +A G + LL E L
Sbjct: 413 LGVQFIAAPGKENTLLAFAEMLEQ 436
>gi|440232242|ref|YP_007346035.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Serratia marcescens FGI94]
gi|440053947|gb|AGB83850.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Serratia marcescens FGI94]
Length = 449
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 96/155 (61%), Gaps = 3/155 (1%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H L G+ ++KD+FDV G T G+ A AA A V +L GA IGKT M
Sbjct: 66 HLSALDGVPVSVKDLFDVAGEATRGGSRALAHA-PAAQRHAAVVQRLLQAGAVVIGKTNM 124
Query: 84 DEMAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
E AYS G N HYGTP NP R+PGGSSSG+AVAV + ++G+DTGGSVR+P
Sbjct: 125 TEFAYSGLGINPHYGTPANPWRRQERRIPGGSSSGAAVAVSDGMGFGAIGSDTGGSVRIP 184
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
A++CG+ G++PS S + AGV P++ S D+VG A
Sbjct: 185 AAFCGLTGYKPSASRIDMAGVQPLSPSLDSVGVIA 219
>gi|293394591|ref|ZP_06638885.1| amidase [Serratia odorifera DSM 4582]
gi|291422900|gb|EFE96135.1| amidase [Serratia odorifera DSM 4582]
Length = 449
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 182/403 (45%), Gaps = 31/403 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA-VLSGGATSIGKTIMDE 85
PL G+ +IKD+FDV G T G+ T +A AV+A +L G +GKT M E
Sbjct: 69 PLDGVPVSIKDLFDVAGEATTGGSR--VLTDAAPAQRHAAVVARLLQAGVVIVGKTNMTE 126
Query: 86 MAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N HY TP NP A R+PGGSSSG+AVAV + ++G+DTGGSVR+PA+
Sbjct: 127 FAYSGLGINPHYATPANPWQRAARRIPGGSSSGAAVAVADGMGFGAIGSDTGGSVRIPAA 186
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+CG+ G++PS + AGV P++ S D+VG A + + + A + + +Q
Sbjct: 187 FCGLTGYKPSACRIDMAGVQPLSPSLDSVGVIAHGVADCVALDAAIAERALEPQTLPLAQ 246
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
FA +P V L +V F ++ + L D +P
Sbjct: 247 ARFA--------VPQTLVLDDLDDAVATAF-DRALQRLTLAGARIDALPC---------- 287
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
E++ + S L+ +++ H + + D P + R+
Sbjct: 288 -SEFAELAAINASGGFTALESWQW---HQTLIASQAADYDPRVLSRIRRGATLGEGDRQR 343
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVFRARAFSLL--SIAGV 380
Q + + + ++A L + L++P+VP P + +++ FR +L S+
Sbjct: 344 LQQQRGDWQRRVAATLEGYDALLMPSVPFIAPTIAELEADEALYFRVNGAALRNPSVINF 403
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C VS+P+ + P+ + + D LL ++ L
Sbjct: 404 LDGCAVSLPMQPPGSAPIGLMVAGLPQQDQALLGWALSIERCL 446
>gi|298292829|ref|YP_003694768.1| amidase [Starkeya novella DSM 506]
gi|296929340|gb|ADH90149.1| Amidase [Starkeya novella DSM 506]
Length = 480
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 187/408 (45%), Gaps = 53/408 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F+ KD+FD T G+ A + A A L V GA +GK + E
Sbjct: 68 LAGIPFSCKDVFDTVTLPTTAGSRAMQDYRPARDAQALARLRV--SGAILLGKNNLHEFC 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y I G N +GTP NP R+ GGSSSGSAVAV + F+LGTDTGGSVRVPAS CG+
Sbjct: 126 YGITGANPTFGTPANPHDRHRLAGGSSSGSAVAVTNRTAMFALGTDTGGSVRVPASLCGL 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ +S GV+P S D G R AD VR +Q
Sbjct: 186 VGFKPTRGQISLKGVVPFCWSLDHAGILT----------RSCGDAADVFLAVREAQ---- 231
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE----GNK 263
+S +D +G S+ L G + L + D S+ H ++E G +
Sbjct: 232 ---QAVSGANADHSERG--NSLHGLRIG-VPRGAYLDNAASDIAASVHHLIAECRRLGAQ 285
Query: 264 EQEYSIPS---LAALSSAMRLLQ-----RYEFKNNHGDWVTTVKPDLGPG---ISERVWE 312
+ +P + S A++L++ R + + V+ L G ++E +
Sbjct: 286 IVDVVMPDDTHVRTASLAVQLVEAFAWHRTNLQRRFDLYGEDVREGLLQGQFILAEHYVQ 345
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFRA 369
A+R A K +A +S LL D +L+ PT P P L Q+ + + V
Sbjct: 346 ALRLIAVK-----------QAEVSELLKDVDVLMTPTTPVVAPPLDQKQVTLAGVVVPIG 394
Query: 370 RAFSLLS-IAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNL 415
A S + + ++G +++P+G + D LP+ + L+ KH D LL +
Sbjct: 395 NALSHFTCLFNLTGHPALTVPIGRNGDGLPMGMQLIGKHYRDMKLLAI 442
>gi|289669967|ref|ZP_06491042.1| amidase [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 486
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 172/398 (43%), Gaps = 36/398 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F +KD+FDV G VT G A+ AA A V + GA +G MDE A
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAAGRAQCAPAARDAA-VVQRLGDAGAVLVGTANMDEFA 166
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y N HYGT TNP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG+
Sbjct: 167 YGFATVNAHYGTTTNPHDHQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGV 226
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H AV GV P + D VG FA L RV V+ A
Sbjct: 227 YGLRPTHGAVPVDGVFPFVDALDVVGPFATSVSDLRRVYEVMCGHA-------------- 272
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
+PS R T L + +L GG N+ D L+ L+ N
Sbjct: 273 --------LPS-RTTGNL--RIARL-GGWFQRNLD-----PDLDAGLEALLTACNSTTTI 315
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+P +A +L E + H + T P +R+ ++ A + Q
Sbjct: 316 ELPEAERARAAAFVLTAAEGGHRHRSALHTHGAQFDPATRDRLLAGLQLPASAVADAQRF 375
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSGF 383
A+ AL D +L+ P P P++ D ++ A + L I G++
Sbjct: 376 AHWFANAMHALWDDVDVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAAC 435
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + + L L
Sbjct: 436 PVLAAPLPRPGRLPLGVQLIAAPGREDRVFALAAQLER 473
>gi|449117591|ref|ZP_21754008.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
H-22]
gi|448950792|gb|EMB31613.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
H-22]
Length = 485
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 185/425 (43%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + ++ +T + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATV--IDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F +P + + L +A +
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEP---DDIALALAVMAGKDEMDET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + S++ + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIA-----SLKVAIPNEFLNTQGLDPEVKQVFDELSAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDAGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|449130403|ref|ZP_21766623.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
SP37]
gi|448942124|gb|EMB23019.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
SP37]
Length = 485
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 43/420 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL A+KD + G + + ++ +T + +L GA +G+ MDE+
Sbjct: 73 PLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATV--IDRLLEAGAVLMGRINMDEL 130
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+PASYCG
Sbjct: 131 AMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLPASYCG 190
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G +P++ S GV+ + S D VG F +P + + L +A + S+
Sbjct: 191 IYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEP---DDIALALAVMAGKDEMDETSEEAD 247
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE-GNKEQ 265
L+LS+ + + S++ + L VK L +L++ G K +
Sbjct: 248 FSSLLKLSAYSKEEIA-----SLKVAIPNEFLNTQGLDPEVKQVFDELSAWLTKNGAKLE 302
Query: 266 EYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPDLGPGI 306
E SIP L A+S A L R + K N ++ T GP +
Sbjct: 303 EVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDAGKGNDELYIQTRSEGFGPEV 362
Query: 307 SERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM-- 359
R+ + S + +V+ ++ ++ +L + ++ PT P P KL
Sbjct: 363 KRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFKLNEKV 422
Query: 360 -DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVE 417
DP A+ + + F+ + ++ +S+P G LPV I K S+ +L L +
Sbjct: 423 DDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRILKLAK 478
>gi|299533924|ref|ZP_07047287.1| amidase [Comamonas testosteroni S44]
gi|298718094|gb|EFI59088.1| amidase [Comamonas testosteroni S44]
Length = 225
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL ++KD+FD+ GH T G + AT TA V + GA +G T M E
Sbjct: 69 PLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNMTEF 127
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP NP D R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 128 AYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVRIPS 187
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+ CG+ GF+P+ VS GV+P++ + D++G A
Sbjct: 188 ALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLA 221
>gi|427427139|ref|ZP_18917184.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Caenispirillum
salinarum AK4]
gi|425883840|gb|EKV32515.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Caenispirillum
salinarum AK4]
Length = 455
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL ++KD+FDV G VT G+ A AT+ APAV + + GA +G+T M E
Sbjct: 70 PLLGLPVSVKDLFDVKGQVTAAGSVVRA-DDPPATADAPAVRRLRAAGAVVVGRTNMTEF 128
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N H+GTP NP A R+PGGSS+G+AV+V + +LGTDTGGSVR+PA
Sbjct: 129 AFSGVGLNPHHGTPRNPWDRATGRIPGGSSAGAAVSVTDGMAAAALGTDTGGSVRIPAGL 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
CG+ GF+P+ + V G P++ + D+VG A
Sbjct: 189 CGLAGFKPTQARVPRDGAFPLSYAMDSVGPLA 220
>gi|365855896|ref|ZP_09395928.1| Amidase [Acetobacteraceae bacterium AT-5844]
gi|363718689|gb|EHM02021.1| Amidase [Acetobacteraceae bacterium AT-5844]
Length = 453
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 190/440 (43%), Gaps = 56/440 (12%)
Query: 10 AFMEKFVLQPSSSAHQL-----------PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHS 58
AFME Q +SA + P +G+ +IKD+FD +G T G+ +
Sbjct: 43 AFMEVQAEQALASARSMDALRAAGRAPSPWAGIPISIKDLFDQEGVRTRAGSVAL-KDAP 101
Query: 59 AATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPC--APDRVPGGSSSG 116
AT+TAP V + G +G+T M E A+S G N HYGTP +P A R+PGGSSSG
Sbjct: 102 VATATAPVVARLQRAGFVVLGRTNMVEFAFSGLGVNPHYGTPRSPYDRATGRLPGGSSSG 161
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+AVAV + +LG+DTGGS R PA+ CGI G++P+ V GV+P++ S D++G A
Sbjct: 162 AAVAVADGMGLGALGSDTGGSCRAPAALCGIVGYKPTAKRVPLEGVLPLSFSLDSIGPLA 221
Query: 177 WDPKILNRVG--RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEK--- 231
N VG +L L V P P+ R GL V +
Sbjct: 222 ------NTVGCCAILHGLMAGEEEVAP---------------PAPRSVAGLRFGVPEDSY 260
Query: 232 LFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLA--ALSSAMRLLQRYEFKN 289
LF G +E ++ + +L + G + + ++IP LA L++A E
Sbjct: 261 LFEG--LEPAVVTAFQS----ALARLEAAGARIERFAIPELADIPLANATGGFVAMESYA 314
Query: 290 NHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
H + P+ I R+ A + + AA++ + ++ PT
Sbjct: 315 WHRKLIEKAGPEYDQRILARIMRGATVGAADYIELMKERERIIAAVAPRTAPYDAILCPT 374
Query: 350 VPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF-----CQVSIPLGLHDNLPVAISLLA 404
PP + + EV +LL + + F C +S+P PV + L
Sbjct: 375 CAVTPPAIS---AVDEVDEYNRINLLILRNTAAFNFLDRCSISVPCHAPGEAPVGLMLTG 431
Query: 405 KHGSDGFLLNLVETLHNTLK 424
H D L + + LK
Sbjct: 432 AHDGDAALFSAAAAVEAVLK 451
>gi|257067691|ref|YP_003153946.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Brachybacterium faecium DSM 4810]
gi|256558509|gb|ACU84356.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Brachybacterium faecium DSM 4810]
Length = 461
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 171/396 (43%), Gaps = 48/396 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL A+KD V G VT G+ + R+H A A V + + GA +G T + E
Sbjct: 68 PLDGLPLAVKDNLAVAGRVTTMGSAIY-RSHLPA-ENAGVVDRLDTHGAVRLGATNLHEF 125
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN H+G NP +R PGGSS GSAVAV A + +LG+DT GS+R+PA+ CG
Sbjct: 126 ALGVTTENPHFGICRNPWDTERTPGGSSGGSAVAVSAGMALGALGSDTSGSIRIPAAACG 185
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---------------DPKILNRVGRVLLQ 191
I G +P++ VS+ G P A S D VG DP++ + +
Sbjct: 186 IVGLKPTYGRVSSYGCYPEAWSLDHVGVLTQTAADAALLLDAISGHDPRVPSSLPLPPTM 245
Query: 192 LADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKV 251
A ++ P ++ ED DR+ +E+V+ G
Sbjct: 246 TAQEMAAEAPLRIGIEEDFF------FDRIDPA-------------VEDVVRG------- 279
Query: 252 PSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVW 311
+L + G + ++PSLA + A+ ++ E H D + G + + V
Sbjct: 280 -TLGAMVEAGAQLVPLTLPSLAEATFALTVIDTAETTAFHDDQFRRRGEEYGEDVRQLVE 338
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVFRAR 370
SA Q +++ L+ + ++ PT+P P++ + R R
Sbjct: 339 CGTLPSAVDYLHAQQIRSRLKGEFHRAFSEVDVIASPTLPIRTPRVGEATVQVTGESRDR 398
Query: 371 AFSLLSIAGVS---GFCQVSIPLGLHDNLPVAISLL 403
L+ + G S G S+P G+ D +PV I L
Sbjct: 399 DGELMRLVGPSNLVGIPSASVPCGMVDEMPVGIQFL 434
>gi|94496799|ref|ZP_01303374.1| amidase [Sphingomonas sp. SKA58]
gi|94423812|gb|EAT08838.1| amidase [Sphingomonas sp. SKA58]
Length = 432
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 185/413 (44%), Gaps = 46/413 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ +KD FD+ GH T G+ R A A V + + G +G+T M E
Sbjct: 52 PYLGMPVTVKDNFDLMGHPTTAGS-RLLRDAPVARRDAVVVQRLRAAGFVLLGRTNMTEF 110
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N H+GTP NP P R+PGGSSSG+AV+V L ++GTDTGGS+R+PA+
Sbjct: 111 AFSGLGINPHFGTPANPAYPGELRIPGGSSSGAAVSVALGLTRVAVGTDTGGSIRIPAAL 170
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+P+ +A+S GV+P++ + D VG R L + DV P +
Sbjct: 171 CGVTGFKPTAAAISRDGVLPLSTTLDAVGIIGESAADC----RALFDVLRDV----PGKP 222
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
++P+ R+ G+V + +++E V+ +V H
Sbjct: 223 F---------AVPAHRIRLGVVTN-------YVMEG------VQPEVAGPFHAALARLGA 260
Query: 265 QEYSI-----PSLAALSSAMR--LLQRYEFKNNHGDWVTTVK-PDLGPGISERVWEAVRT 316
+I P L L S ++ E H ++ + + P + R+ R
Sbjct: 261 AGVAIEPIELPPLDRLPSLVKDATFPASESAAWHQSYLDAGRGAEYDPKVLARIEAGNRM 320
Query: 317 -SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFS 373
+A + + K + L G HGI V PTVP P + D +A A
Sbjct: 321 GAAAYARLVEGRKAFIANMAEQLNGLHGI-VWPTVPVLAPSISELEDDAAYHAANALMLR 379
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
+IA + C +S+P PV +++ A GSD LL + ET L ++
Sbjct: 380 NSTIANLLDGCAISLPCP-EAARPVGLTIAALAGSDDLLLGVAETCQGVLNQK 431
>gi|302832305|ref|XP_002947717.1| hypothetical protein VOLCADRAFT_87871 [Volvox carteri f.
nagariensis]
gi|300267065|gb|EFJ51250.1| hypothetical protein VOLCADRAFT_87871 [Volvox carteri f.
nagariensis]
Length = 173
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 103/187 (55%), Gaps = 50/187 (26%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
Y A+++K + A PL GL FA+KD+FD
Sbjct: 17 YNAYIDKSLTV--KGAPDGPLKGLAFAVKDLFD--------------------------- 47
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSA--------- 118
A+L GAT GKT MDE+AYS+NGEN HYGTP NP AP R+PGGSSSGSA
Sbjct: 48 -ALLDAGATLRGKTHMDELAYSLNGENIHYGTPINPAAPGRIPGGSSSGSASWSWSRACI 106
Query: 119 -----------VAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQ 167
VAV A V +LG+DTGGSVRVPA+YCG++G RP+ + S AG P+A
Sbjct: 107 WYGVDKTDLGKVAVAAGDVPVALGSDTGGSVRVPAAYCGLYGIRPTWARTSLAGARPLAP 166
Query: 168 SFDTVGW 174
SFDT GW
Sbjct: 167 SFDTAGW 173
>gi|398376672|ref|ZP_10534854.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. AP16]
gi|397727866|gb|EJK88290.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. AP16]
Length = 455
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+F + G T G+ AR + A+ A V A+ G S+G+ M E A
Sbjct: 72 LDGIPIAWKDLFAIRGLPTTAGSTVLAR-EAPASEDADIVQALAEAGMVSVGRVNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D RVPGGSSSGSAVAV A LV S+GTDTGGSVR+P+++
Sbjct: 131 FSGLGLNPHYGTPLNPLSKDVERVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------WDPKILNRVG--RVLLQLADDV 196
G+ G++ S S AGV P+A S D++G W + R+ +++ D+
Sbjct: 191 GLVGYKASRGRYSMAGVFPLATSLDSLGPLCRSVQDAIWVDAAMRRLTAPQIVRASLKDI 250
Query: 197 NLVRPSQVIF 206
+LV P ++
Sbjct: 251 SLVVPETIVM 260
>gi|170695017|ref|ZP_02886166.1| Amidase [Burkholderia graminis C4D1M]
gi|170140115|gb|EDT08294.1| Amidase [Burkholderia graminis C4D1M]
Length = 462
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 182/407 (44%), Gaps = 43/407 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P++G+ +IKD+ DV G VT G AA AP V + S G IG+T M
Sbjct: 86 PIAGIPVSIKDLLDVKGEVTRAGALALDDMPVAACD-APVVSRLRSSGVVLIGRTNMTPF 144
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S+ G N H+GTP NP DR+PGGSSSG+AV+V +V ++G+DT GS+RVPA+ CG
Sbjct: 145 AFSVVGLNSHFGTPGNPWDRDRIPGGSSSGAAVSVADGMVAAAIGSDTVGSIRVPAALCG 204
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V +G +P++ + D++G A +AD + VI
Sbjct: 205 VVGFKPTQRTVPLSGAVPLSPTLDSIGPLAR-------------SVADCAAI---HAVIS 248
Query: 207 AEDCLQLSSIPSDRV-TQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE----G 261
E +++P D V +GL FG + ++L D + + + + G
Sbjct: 249 GE-----AAVPLDMVGVRGLT------FG--VPREIVLDDLDIEVGRAFERACARISEAG 295
Query: 262 NKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
+ ++ S +L + + R++Q E H + + D P IS RV + A
Sbjct: 296 ARIEQVSFKALREVDALNGNRVIQLAEAYAWHRELLERRGADYDPHISARVRSGAQILAA 355
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
S + L A L++PT P +A + R + LL G
Sbjct: 356 DYLSMLSHRRRLMREFDAATSGFDALLLPTTSMIAPTFDECMAAEDAVRTK---LLRNTG 412
Query: 380 VSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
F C +S+P+ PV + + D LL + + + +
Sbjct: 413 PFNFLDCCSISLPVHRPGEAPVGLMVAGHRDGDWQLLKVANAIESII 459
>gi|398833030|ref|ZP_10591174.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398222261|gb|EJN08642.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 450
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 187/406 (46%), Gaps = 32/406 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P+ G+ ++KD+FDV G T G+ R AT+ A AV +++ GA +GKT M E
Sbjct: 68 PIDGIPVSVKDLFDVVGETTLAGSVVL-RGKPVATANAVAVQHLINAGAIVMGKTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP N D R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 127 AYSGLGINPHYGTPRNAWQRDVDGGRIPGGSSSGAAISVTDGMAAAAIGSDTGGSVRIPS 186
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ G+ GF+P+ S VS GV+P++ D++G A + V VL L P
Sbjct: 187 ALNGLTGFKPTASRVSMQGVLPLSTYLDSIGPLAASVECCAIVDAVLAGQPYRAPLAHPL 246
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD-YVKDKVPSLQHFLSEG 261
+ L+L + P++ V G+ +V + + G V+ VP+L +
Sbjct: 247 R------GLRLLA-PTNVVLDGIDDTVAAAYRNALSALSAAGAVIVEQAVPALGELAAIN 299
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
K + + A R NH + V +S + +A +
Sbjct: 300 AKGGFTAAEAYA--------WHRQLIAENHAGYDQRV-------VSRILRGRDMGAADLL 344
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
DV + + A A L LV+PTVP P++ ++ E + +L A +
Sbjct: 345 DVIHA-RARWIANTEAQLDGFDALVMPTVPIVAPRIADLQASDEAYYGANGLMLRNATLI 403
Query: 382 GF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
F C VS+P PV +SL A G D LL++ + L+
Sbjct: 404 NFLDGCAVSLPCHAAGEAPVGLSLAAPAGHDRRLLSIASAVEALLR 449
>gi|414167803|ref|ZP_11424007.1| hypothetical protein HMPREF9696_01862 [Afipia clevelandensis ATCC
49720]
gi|410887846|gb|EKS35650.1| hypothetical protein HMPREF9696_01862 [Afipia clevelandensis ATCC
49720]
Length = 432
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 182/409 (44%), Gaps = 32/409 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
S + + PL G IKD+FDV G VT G+ A A + A V + GA K
Sbjct: 48 SGSSRGPLDGAILTIKDLFDVKGEVTRAGSRVLASRGKPAEADAVIVQRLREAGAVIAAK 107
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T M E AYS G N H+GTP NP RVPGGSSSG+AVA + ++GTDTGGS R+
Sbjct: 108 TNMTEFAYSGLGANPHFGTPGNPADRRRVPGGSSSGAAVAAADAFCEIAIGTDTGGSTRI 167
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ GF+P+ V AG P++ + D++G A R + AD
Sbjct: 168 PAAFCGVTGFKPTVKRVPRAGAFPLSFTLDSIGPIA----------RSVADCAD------ 211
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP-SLQHFLS 259
V+ E L+S V G V+ G+ I+ L D V P +L
Sbjct: 212 ADAVLAGETPSPLASPSLKDVRAGFVQ-------GYPIDG--LDDIVGKAYPQALAKLAP 262
Query: 260 EGNKEQEYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
+ ++ +L + +A + E H + + P + R+ + + S
Sbjct: 263 HWKSGADVTLKALDIMHTANERGGVAPPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKIS 322
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + A + A+ +LV+PTV P + + S E F R L
Sbjct: 323 AADYILALRDRERGIAQMDAVFDQVDVLVMPTVQIVAPTMD-EISTPESFNKRNVQALMN 381
Query: 378 AGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ F C +S+P+ + LPV + L+ +HG D LL + + + L
Sbjct: 382 TSIWNFFDVCAISLPIRFGNALPVGLMLVGRHGDDRRLLAMAAAVESRL 430
>gi|389877134|ref|YP_006370699.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Tistrella mobilis
KA081020-065]
gi|388527918|gb|AFK53115.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Tistrella mobilis
KA081020-065]
Length = 452
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 181/397 (45%), Gaps = 33/397 (8%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q PL+GL +IKD+FDV G T G+ + + A + AP V + + GA GKT M
Sbjct: 69 QGPLAGLPISIKDLFDVAGETTMAGSV-VMKDAAPAMADAPIVARLRAAGAVITGKTNMT 127
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A+S G N HYGTP N DR+PGGSS+G+ ++V + ++GTDTGGS+R+PA++
Sbjct: 128 EFAFSGVGLNPHYGTPGNVFDADRIPGGSSAGAGISVVKGMAAAAIGTDTGGSIRIPANF 187
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR-PSQ 203
GI GF+PS + V G +P++ + D++G A V VL A + R P
Sbjct: 188 AGIVGFKPSQARVPLEGALPLSSTQDSIGPLAPTVACCALVDAVLAGEAPRILRPRAPET 247
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ FA +P D V + + + +L+ G +
Sbjct: 248 LTFA----VARGLPMDGVDDQVANAYDA---------------------ALKRLRDAGVR 282
Query: 264 EQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA-VRTSAQK 320
E +P +A + +A E H + T P + R+ +A
Sbjct: 283 LIELELPEIAEVPQLNAAGGFSAAESWAWHRAIIQTGAERYDPRVLSRIRRGEAMGAADY 342
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL--SIA 378
ID+ + + + AA L L++PTVP PP++ + R L +
Sbjct: 343 IDLIKR-RRRMVAAADLALRPFDALLMPTVPIVPPRIADLADDADYTRLNLLVLRNPTFG 401
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
V C V++P+ LP + LL ++G+D LL++
Sbjct: 402 NVLDLCGVTLPIAEPGALPAGLMLLGRNGADHDLLDV 438
>gi|425469635|ref|ZP_18848554.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9701]
gi|389880465|emb|CCI38759.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9701]
Length = 443
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 178/403 (44%), Gaps = 38/403 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD++G VT G+ R H AA A A+ + + GA +G T MDE
Sbjct: 67 PLAGVPFAVKNLFDIEGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEY 125
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP P RV GGSS GSA AV A LV +LG+DT GSVRVPA+ CG
Sbjct: 126 AYGFVTENAHYGATANPLDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCG 185
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQV 204
+ G +P+ VS G+ S D +G+F+ + + + RV + L +N + ++
Sbjct: 186 VVGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWRVFAKNNLKAPLNGLEGVKI 245
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A+D Q + P V + + E+L
Sbjct: 246 ALADDYFQQGAEPE--VIEAVTAIAERL-----------------------------GVS 274
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
Q+ +IP A +A ++ E N H + T D P +R +
Sbjct: 275 QKITIPETARARAAAYIITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQA 334
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGV 380
Q + R L + + I++ PT+P P L ++ ++ + R
Sbjct: 335 QRFRRWYRDRLREIFTEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPFSF 394
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L++ L L
Sbjct: 395 IGLPALSLPIKRSSRLPLGLQIIAAPDREDLILSVARVLEEML 437
>gi|410646870|ref|ZP_11357315.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
gi|410133574|dbj|GAC05714.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
Length = 373
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 183/399 (45%), Gaps = 49/399 (12%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
LT +KD DV G VT G+ A + AT A V A+LS G +GK M E+AY +
Sbjct: 16 LTGGVKDNIDVAGFVTQAGSEALAH-NPKATEHADVVNAMLSSGVKLVGKLNMHELAYGM 74
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N + GTP N PD +PGGSSS A AV +DFS+GTDTGGS+RVPA+ CG++G
Sbjct: 75 TGVNAYRGTPVNYLFPDYIPGGSSSACAAAVAQGAIDFSIGTDTGGSIRVPAACCGVYGL 134
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDC 210
+P++ +S GV+P + D VG A+ + L R +Q D P + ++D
Sbjct: 135 KPTYGRISRKGVLPQESTLDCVGPLAFSAEKLIRA----MQSIDST--FSP---VASKDI 185
Query: 211 LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIP 270
++L +VT +++ L G I + I + + ++P
Sbjct: 186 IKLG-----KVTVNAKHTIQALVDGAIDKEFI--------------------QLRPAALP 220
Query: 271 SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTE 330
SL L +E G +V T K LG + R+ A + V+ +
Sbjct: 221 SLVEAFEVGLPLMNFEMCQAFGHFVETGK--LGNDVQNRLLAARDIDESIVAKANVVRKK 278
Query: 331 LRAALSALLGDHGILVIPTVPGPPPKLQMDPSA----LEVFR-ARAFSLLSIAGVSGFCQ 385
+ L LV+PT+ P K + D A L++ R F+L SG
Sbjct: 279 FTQEVDRALRGVDALVLPTLAAFPLK-RTDALAGQNDLQISSLTRPFNL------SGHPA 331
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
++IP+ + PV + L+ G+D + + + + ++ K
Sbjct: 332 ITIPIRNNLGKPVGMQLVGAKGNDEMICYIAQKISDSNK 370
>gi|73668422|ref|YP_304437.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina
barkeri str. Fusaro]
gi|109891955|sp|Q46E35.1|GATA_METBF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|72395584|gb|AAZ69857.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Methanosarcina barkeri str. Fusaro]
Length = 475
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 192/433 (44%), Gaps = 46/433 (10%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGK 80
H PL+G+ AIKD V G G+ D+ +A + +L+ GA +GK
Sbjct: 57 HNGPLAGVPIAIKDNISVVGLPNSCGSKILEDYIPPFNAYV-----IEKLLAAGAVILGK 111
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T MDE A + E ++G NP +RVPGGSS GSA V A F+LG+DTGGSVR
Sbjct: 112 TNMDEFAMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRC 171
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDV 196
PA++CG+ G +P++ AVS GV+ A S + VG A + +++ + + + +
Sbjct: 172 PAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDIAVLMDVIAGYDRKDSTSI 231
Query: 197 NLVRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSL 254
+ Q ED L +P + +G+ VEK I + LG + + +P +
Sbjct: 232 DSKTEYQKALIEDVKGLKIGVPKEFFGEGIHPDVEKAVWNAIHKCEDLGASWEEVSMPHI 291
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVWE 312
++ L+ Y I +++ SS + RY ++ + +W V G V
Sbjct: 292 KYALA------SYYIIAMSEASSNLARFDGTRYGYRASGENWHAMVSKTRAEGFGTEVKR 345
Query: 313 AV-------------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ- 358
+ + + + V VK + ALS + +L+ PT+P P K+
Sbjct: 346 RILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKV----DVLMAPTMPNPAFKIGE 401
Query: 359 --MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
DP L + +++AGV +S+P G D LP+ + ++ K + +L
Sbjct: 402 KIEDPLTLYLSDVNTCP-INLAGVP---SLSVPCGFTDGLPIGLQIMGKPFDEPAVLRAA 457
Query: 417 ETLHNTLKEELQR 429
T +R
Sbjct: 458 YTFEQNTDYHTKR 470
>gi|384920003|ref|ZP_10020026.1| amidase, partial [Citreicella sp. 357]
gi|384466121|gb|EIE50643.1| amidase, partial [Citreicella sp. 357]
Length = 164
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 96/147 (65%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P +A PL+GLT +KDI+DV G+ TG G P T+TAPA+ A+L GA
Sbjct: 18 PVENAPDGPLAGLTLGVKDIYDVAGYRTGCGCPIRLAMSDIKTATAPAIQALLDAGAAFN 77
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GK DE+A+S+ G N H+G P NP AP R+PGGSSSGS A L D ++G+DTGGSV
Sbjct: 78 GKLHTDELAWSMYGMNAHFGMPVNPNAPGRIPGGSSSGSGAACAGGLADITVGSDTGGSV 137
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPM 165
R PAS+CG +G RP+H +S GV+P+
Sbjct: 138 RAPASFCGTWGIRPTHGLISLDGVMPL 164
>gi|395799160|ref|ZP_10478442.1| hypothetical protein A462_27878 [Pseudomonas sp. Ag1]
gi|395336847|gb|EJF68706.1| hypothetical protein A462_27878 [Pseudomonas sp. Ag1]
Length = 441
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 6/152 (3%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A KD+FDV G +T G + R AA AP+V + G S+GKT +
Sbjct: 54 PLSVFDGVPLAWKDLFDVAGSITTAGAA-YRRNAPAALLDAPSVGLLCRAGMVSVGKTNL 112
Query: 84 DEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
E+AYS G N H+GTP NP + D R+PGGSSSGSAVAV A +V ++GTDT GS+R+P
Sbjct: 113 SELAYSGLGLNPHFGTPHNPASVDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIP 172
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
A+ G+ G+R S S GV P+A + D++G
Sbjct: 173 AALNGVVGYRSSCRRYSRDGVFPLAHTLDSLG 204
>gi|429220977|ref|YP_007182621.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Deinococcus peraridilitoris DSM 19664]
gi|429131840|gb|AFZ68855.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Deinococcus peraridilitoris DSM 19664]
Length = 484
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 198/443 (44%), Gaps = 61/443 (13%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL+G+ +KD +V G T G+ HS T+TA V ++ GA +GK MDE
Sbjct: 63 LPLAGVPVVVKDNLNVKGTRTTCGSRALENYHSPYTATA--VQRLIEAGAVVVGKANMDE 120
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + EN +G NP RVPGGSS GSAVAV A +V +LG+DTGGSVR PA++
Sbjct: 121 FAMGSSSENSAFGVVRNPWDHTRVPGGSSGGSAVAVAAGMVPVALGSDTGGSVRQPAAFN 180
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G++GF+P++ VS G++ A S D +G FA A+D+ L+ VI
Sbjct: 181 GVYGFKPTYGRVSRYGLVAYASSLDQIGPFARS--------------AEDLALLM--DVI 224
Query: 206 F---AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY--VKDKVPSLQHFL-S 259
A D L ++P+ R L + V + G + E + G+ V+ V + L S
Sbjct: 225 SGPDARDATSLETLPAFRAA--LTREVRGMKFGLVREALEGGNTPGVRAAVEQICTLLES 282
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDW-----------VTTVKPDL------ 302
G E +P+L +A L+ E +N + T V +
Sbjct: 283 LGASVAEVGLPTLHYGVAAYYLIATPEASSNLARYDGMVYSHRAAGQTDVNSSMSSSRGA 342
Query: 303 --GPGISERVWEAVRT-SAQKIDVCQSVKTELRAAL----SALLGDHGILVIPTVPGPPP 355
GP + R+ S+ D + ++R + + G L+ PT P P
Sbjct: 343 AFGPEVKRRILMGTYALSSGYYDAFYAKAMKVRRLVADDFARAFGHFDALITPTSPFPAF 402
Query: 356 KL---QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD----NLPVAISLLAKHGS 408
+L DP L ++ A +++ ++G +SIP G LPV + +A
Sbjct: 403 RLGEKTHDP--LSMYAADIDTVM--VNLAGVPALSIPAGYETLEGRELPVGVQFIAPALG 458
Query: 409 DGFLLNLVETLHNTLKEELQRMS 431
D L+ + + + + + R++
Sbjct: 459 DERLVTIAKAIEDATNKAYLRLA 481
>gi|293605663|ref|ZP_06688042.1| amidase [Achromobacter piechaudii ATCC 43553]
gi|292815947|gb|EFF75049.1| amidase [Achromobacter piechaudii ATCC 43553]
Length = 449
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 179/394 (45%), Gaps = 34/394 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FD++G T G+ AR AA A V +++ GA IG+T M E
Sbjct: 69 VEGLPISIKDLFDIEGETTMAGS--VAREGEPAAEENAEVVQRLIAAGAVIIGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + +G+DTGGSVR+PA+
Sbjct: 127 AYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + + L+ D V +
Sbjct: 187 CGLTGFKPSAWRVSMTGVLPLSANLDSIGPIAASVRCCAELDAI---LSGDGGPVPEAMS 243
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ L+L ++P+ + K V F + + +KD G
Sbjct: 244 LRG---LRL-AVPTTLALDAMDKHVADTFAATVAK-------LKDA----------GALV 282
Query: 265 QEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E +IP A L S + E H D + P + R+ SA
Sbjct: 283 DEIAIPEFAELGSINSKGGFTAAEAWAWHRDLIARAGKRYDPRVVSRIMRGQDMSAADYL 342
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ AA+ + + L++PT P P + ++ E + A +L +
Sbjct: 343 DLLDAREAWVAAVDHRIAGYDALIMPTTPIVAPAVADLVASDEAYYAANGLILRNPTLIN 402
Query: 383 F---CQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
F C +S+P PV + + +G+D +L
Sbjct: 403 FLDGCALSLPCQAAGTAPVGLMISGSNGADRRIL 436
>gi|420243236|ref|ZP_14747184.1| allophanate hydrolase, partial [Rhizobium sp. CF080]
gi|398062991|gb|EJL54752.1| allophanate hydrolase, partial [Rhizobium sp. CF080]
Length = 460
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 177/407 (43%), Gaps = 36/407 (8%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
+ PL G+ FA+KD DV G T PD+A A V + + GA IGKT +D
Sbjct: 64 EKPLFGIPFAVKDNIDVAGMPTTAACPDYAYMPE---KDATVVGLLKAAGAFVIGKTNLD 120
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
+ A + G Y P N VPGGSSSGSAVA +V F+LGTDT GS R+PA
Sbjct: 121 QFATGLVGVRSPYPIPRNAIDAKLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAGL 180
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
I G +PS A+ST G+IP ++ D V FA ADD V
Sbjct: 181 NNIVGLKPSVGALSTTGIIPACRTLDCVSIFALT--------------ADDAWKVFSVAA 226
Query: 205 IFAEDCLQLSSIPSDR-------VTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ E ++P+ +T G+ + F G I GD + + L H
Sbjct: 227 KYDETDAYSKAVPATGFGSAPPVLTIGVPAKADLQFFGDTIMEAAYGDAIS-MLARLGHR 285
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
+ E + + Y + +L L + +RY D T + P ++ +++ A + S
Sbjct: 286 IVEVSFGEFYKVANL--LYEGAWVAERYAAVKPFFD---TKEESFHP-VTRQIYGAAK-S 338
Query: 318 AQKIDVCQSVKT--ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
D + + L+ L+ L+ + +PT P + ++ + +R +
Sbjct: 339 LSAADAFKGLYALQALKRTLAPLIASVDLFCVPTAPTHYTRADLEAEPIRE-NSRLGTYT 397
Query: 376 SIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ + C +++P G D LP +++LLA G DG +L LH
Sbjct: 398 NFVNLLDMCGIAVPTGTRADGLPASVTLLAPFGRDGLTASLARDLHQ 444
>gi|307730115|ref|YP_003907339.1| amidase [Burkholderia sp. CCGE1003]
gi|307584650|gb|ADN58048.1| Amidase [Burkholderia sp. CCGE1003]
Length = 451
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 193/402 (48%), Gaps = 29/402 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL ++KD+FD+ G VT G+ AA A AV + GA +G+T M E A
Sbjct: 68 LAGLPVSVKDLFDIKGQVTTAGSRVLRDAAPAARDAA-AVARLREAGAVFVGRTNMSEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP NP R+ GGSSSG+AV+V V +LGTDTGGSVR+PA++CG+
Sbjct: 127 FSGLGLNPHYGTPLNPAHAGRLAGGSSSGAAVSVALGHVVAALGTDTGGSVRIPAAFCGL 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V G +P++ SFD+VG A + V+ A D RP
Sbjct: 187 AGFKPTARRVPLDGAVPLSASFDSVGPIARSVDCCALLDSVISGQALD-TAPRPLA---- 241
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L+L + SD V L ++V F N +G ++ S++ F+ E
Sbjct: 242 --GLRL-GVTSDYVADDLDETVSTAF------NRAIG-MLRRAGASVERFVFPELYEVAG 291
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTSAQKIDVCQS 326
P LA +++ +Q + + H V P + +R+ R++A ID+ +
Sbjct: 292 HHP-LAGITA----VQAWAWHRRH---VAREADAYDPRVLKRLRAGEGRSAADYIDLLAA 343
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF--- 383
+ +R A + L ++PTV PP + S + F A ++L V F
Sbjct: 344 RERFMRDART-RLARFDAWLMPTVAVVPPAIAQTGSDDDAFFATNATVLRNPSVVNFMDG 402
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
C +++P LPV +S+ +D +L + ++ L++
Sbjct: 403 CALTLPCHREGELPVGLSICGPALADATVLAIGRSVEALLRD 444
>gi|449103444|ref|ZP_21740190.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
AL-2]
gi|448965296|gb|EMB45961.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
AL-2]
Length = 485
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 186/425 (43%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL AIKD + G + + ++ +T + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAIKDNISMAGKLCTCCSRSLQGYYAPYNATV--IDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F +P + L +A
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEP---GDIAIALAVMAGKDEKDET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKIAIPKEF----LNTQGLDPEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDAGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++A+L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNAVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|398848408|ref|ZP_10605225.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM84]
gi|398248513|gb|EJN33924.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM84]
Length = 371
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 183/406 (45%), Gaps = 69/406 (16%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP-------AVLAVLSGGATSIGKT 81
+G +KD DV G T R S A AP V +L+ GA GK
Sbjct: 13 AGPRVVVKDTIDVAGTAT--------RASSQALEQAPLAERHAEVVSQLLANGARLTGKV 64
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
+ E+A+ G N + GT NP P R+PGGSSSGSA AV A L DFSLGTDTGGSVR+P
Sbjct: 65 SLHELAFGTTGINHYTGTAANPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIP 124
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A CG+FG +P+ VS GV+P S D VG FA +L R ++++ P
Sbjct: 125 ACCCGVFGLKPTFGRVSRKGVMPARSSLDCVGPFAASLPMLVRA----------MSMIDP 174
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP----SLQHF 257
+ V + +P+ L + E I V+ G +P L+HF
Sbjct: 175 TFVP--------AQVPAKARIGVLRVTAEA-----AIHKVVHGALTASGLPLGNVELKHF 221
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
AA + M ++ R F+ G + T K +G I+ R+ A +T+
Sbjct: 222 --------------GAAYDAGMVVINRETFEGC-GHLLETGK--VGTDIAGRLAAAGKTT 264
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF----S 373
+ + V+ + L +L +PT+P P +L+ E RA S
Sbjct: 265 DSALAEAEEVRRRFTEEVDQALASFDVLALPTMPDFPLRLE------EAADTRAVLGMTS 318
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
L+ +SG +SIPLG LPV + L+A G+D LL + E L
Sbjct: 319 LVRPFNLSGHPALSIPLGSAAGLPVGLQLVAAKGADEKLLAVAERL 364
>gi|115523813|ref|YP_780724.1| amidase [Rhodopseudomonas palustris BisA53]
gi|115517760|gb|ABJ05744.1| Amidase [Rhodopseudomonas palustris BisA53]
Length = 449
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 182/411 (44%), Gaps = 47/411 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
+G+ A+KD+FD+ G VT G+ + A + APAV + G IG+T M E A
Sbjct: 71 FAGIPIAVKDLFDIKGQVTRAGSRAL-DDNPRAEADAPAVARLRRAGFVVIGRTNMTEFA 129
Query: 88 YSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP A VPGGS+SG AVAV + +LGTDTGGS R+PA++
Sbjct: 130 YSGIGINPHYGTPKGAWQRAIGHVPGGSTSGGAVAVVDGMAHGALGTDTGGSCRIPAAFN 189
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LAD-------DV 196
G+ GF+P+ S V G +P++ + D+VG A + + VL LA+ +
Sbjct: 190 GLVGFKPTQSRVPRDGAVPLSFTLDSVGPLARSVQCCATLDSVLADQPLAELTPRSVQGM 249
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQ 255
L P+ ++ D L D V Q +++E L G +IE + + +++ D VP
Sbjct: 250 RLAVPTTMVL--DDLD------DAVAQAFERTLEALSRAGALIERIEVPEFL-DVVP--- 297
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ + ++A HGD P + +R+
Sbjct: 298 -------------MSAKGGFAAAESYAWHRYLIVAHGDVYD-------PRVRDRILRGES 337
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFS 373
SA S + L +A L + +V+PT PPK+ D A A
Sbjct: 338 QSAADYVDLVSARKSLVERSTARLSPYDAIVLPTAANTPPKIADLADDKAFTKANLLALR 397
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
++ + C +S+P +PV + L + G+D + +L + ++
Sbjct: 398 NCTLINMIDGCAISLPCHREGEVPVGLMLASTAGTDRRIFDLAAGMEALIR 448
>gi|384438679|ref|YP_005653403.1| Amidase/amidotransferase [Thermus sp. CCB_US3_UF1]
gi|359289812|gb|AEV15329.1| Amidase/amidotransferase [Thermus sp. CCB_US3_UF1]
Length = 434
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 176/406 (43%), Gaps = 43/406 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL +KD+F V G T G A AV + GA KT M E+
Sbjct: 64 PLHGLPLTVKDLFPVKGMPTRAGT---QAPLPPLPEEAQAVRRLKEAGALIFAKTHMHEI 120
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A I GEN G N P R GGSS GSAVAV + SLGTDTGGS+R+PA++ G
Sbjct: 121 ALGITGENPWTGPVRNAIDPTRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAAFNG 180
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+PS +S G +P+++S D G A + + + +L + + L P F
Sbjct: 181 VVGFKPSFGRISLEGALPLSRSTDHAGPLARTVRDAHFLTEIL--AGESIPLEGPQNPTF 238
Query: 207 AEDCLQLSSIPSD----RVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+P D R+ QG+ K+ ++L + +P L+
Sbjct: 239 --------GVPLDFLEGRLGQGVRKAFQRLL---------------EDLPLLR------A 269
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+ +E S+P A RL+ RYE H + P + E + + + +
Sbjct: 270 EVREVSLPLPGAYEVYTRLV-RYEAARIHEKALKEHPEGFSPSVREALLAGLALTEKDYR 328
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA---RAFSLLSIA- 378
+ + LR +L+ L L++P P P P L + LE R AF L++
Sbjct: 329 DAVAEREALRLSLTKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFLTLTLPF 388
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ G +S+P D +PV + ++ + DG +L + L LK
Sbjct: 389 SLLGVPALSLPFARVDGMPVGLQVVGPYAEDGKVLAIGGWLEARLK 434
>gi|358398411|gb|EHK47769.1| hypothetical protein TRIATDRAFT_316778 [Trichoderma atroviride IMI
206040]
Length = 715
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FAIKD DV+G VT +A T AT TAP++ +L GA IGK ++++
Sbjct: 312 PLFGIPFAIKDNIDVEGVVTTAACESYAYT---ATFTAPSIQHLLDAGAIYIGKLNLEQL 368
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G YG + D VPGGSSSGSAVAV A LV F++GTDT GSVR PA++ G
Sbjct: 369 ATGLVGRRSPYGDLHCFHSKDHVPGGSSSGSAVAVAAGLVSFAIGTDTAGSVRAPAAFNG 428
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+ GF+P+ +S G +P QS DT+G A
Sbjct: 429 VVGFKPTKGTISARGAVPACQSLDTIGVLA 458
>gi|422644242|ref|ZP_16707380.1| hypothetical protein PMA4326_04349 [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957794|gb|EGH58054.1| hypothetical protein PMA4326_04349 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 456
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 183/411 (44%), Gaps = 40/411 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G T S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGCVTTAGAA-LRHTLSPALLDAPSVGLLARAGMISLGKTNLSEF 130
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP A R+PGGSSSGSAVAV + +V ++GTDT GS+R+PA++
Sbjct: 131 AYSGLGLNPHFGTPVNPLSDAVPRIPGGSSSGSAVAVASGIVPIAMGTDTAGSIRIPAAF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ GFR + S GV P+A + D+VG VR + V
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDALV 230
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I +D L S P+ + + L L ++E+ + V++ + L G
Sbjct: 231 I--DDLLCARSKPTSLLPRSLAGQ-RFLVDQAVLEDERVAPAVRENLLRAVEALRAGGAL 287
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E +P A + ++L+Q + F + + L P + +R+ A
Sbjct: 288 VE--LPPCQAFQATLQLIQHHGWLGAAEAFALHQPLLDSDAANQLDPRVRKRLEAARSMP 345
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + S + L+ L+ L D +L+ P+V P L + E+F + L +
Sbjct: 346 ASLLVNLYSARETLQEQLTLEL-DGALLLTPSVAHVAPPLAPLLADDELFIQTNLATLRL 404
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
VS+P G+ LP + + A G D LL + + LK
Sbjct: 405 TMPGSLLNMPGVSLPSGVDAAGLPTGLLISAPAGEDARLLRAALAVESLLK 455
>gi|395214034|ref|ZP_10400415.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pontibacter sp.
BAB1700]
gi|394456482|gb|EJF10776.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pontibacter sp.
BAB1700]
Length = 478
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 203/444 (45%), Gaps = 65/444 (14%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S H L+G+ +KD+ +GH + S T+TA V +L+ A IG+
Sbjct: 61 ASGHAGKLAGMVIGLKDVLAYEGHSLQASSQILDGFKSLYTATA--VQRLLAEDAIIIGR 118
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
DE A + EN +G N RVPGGSS GSAVAV A L S+G+DTGGSVR
Sbjct: 119 QNCDEFAMGASNENSSFGPALNADDTTRVPGGSSGGSAVAVQADLCLASIGSDTGGSVRQ 178
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA-----DD 195
PAS+CG+ G +P++S +S G+I A SFD +G + K + +L +A D
Sbjct: 179 PASFCGVVGLKPTYSRISRYGLIAYASSFDQIGIIS---KSVEDAALLLEVMAGSDEYDS 235
Query: 196 VNLVRP----SQVIFAEDCLQLSSIPSDRVTQGLVKSV-EKLFG--------GHIIENVI 242
RP SQ++ ++ ++ I ++GL V E + G GH +E V
Sbjct: 236 TVSHRPVPAYSQMLESDKKYKIGYIRDCFESEGLDAEVKESILGVKDMLKDAGHQVEAVE 295
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKP 300
Y+ VP+ Y I + A SS + +Y F++ + +T++
Sbjct: 296 F-PYLDFMVPT-------------YYILTTAEASSNLGRFDGVKYGFRSENATDLTSLYK 341
Query: 301 D-----LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGI 344
GP + R+ ++A T AQ++ KT+ LL ++
Sbjct: 342 KTRAEGFGPEVQRRIMLGTFVLSADYYDAYYTKAQRVRRLIKEKTD------ELLQNYDF 395
Query: 345 LVIPTVPGPPPKLQMDPSA-LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISL 402
L++PT P +L+ + + L ++ A F++ A ++G +SIP+G N L + + L
Sbjct: 396 LILPTAPTTAFRLEENTANPLAMYLADIFTVQ--ASLAGVPAISIPVGRDANGLSIGLQL 453
Query: 403 LAKHGSDGFLLNLVETLHNTLKEE 426
+ + + LL + + L E
Sbjct: 454 MTRSFEEPQLLAFSNYILDKLTVE 477
>gi|420246927|ref|ZP_14750352.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398072929|gb|EJL64121.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 451
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 180/379 (47%), Gaps = 29/379 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ ++KD+FD+ G VT G+ R + A A AV + GA +G+T M E A
Sbjct: 68 LAGVPVSVKDLFDIKGQVTTAGS-RILRDATPAVRDAAAVARLREAGAVFVGRTNMSEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP NP R+ GGSSSG+AV+V V +LGTDTGGSVR+PA++CG+
Sbjct: 127 FSGLGLNPHYGTPVNPAHAKRLAGGSSSGAAVSVALGHVAAALGTDTGGSVRIPAAFCGL 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V G +P++ SFD++G A + ++ A D RP
Sbjct: 187 IGFKPTARRVPLDGTVPLSASFDSIGPIARSVDCCALIDSIVSGQALD-TAPRPLA---- 241
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L+L + SD V L ++V F N +G ++ S++ F E
Sbjct: 242 --GLRL-GVTSDYVADDLDETVSTAF------NRAIG-MLRHAGASVERFAFPELHEVAG 291
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTSAQKIDVCQS 326
P LA +++A Q + + H V P + R+ R++A ID+ +
Sbjct: 292 RYP-LAGITAA----QAWAWHREH---VARDADTYDPRVLNRLRAGEGRSAADYIDLLAA 343
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF--- 383
+ +R A L ++PTV PP + S E F + +L V F
Sbjct: 344 RERFVRDT-RARLARFDAWLMPTVAIVPPAIPSVESDDEAFSSTNAKVLRNPAVVNFMDG 402
Query: 384 CQVSIPLGLHDNLPVAISL 402
C +++P LPV +S+
Sbjct: 403 CALTLPCHREGELPVGLSI 421
>gi|126641910|ref|YP_001084894.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ATCC 17978]
Length = 304
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 168/335 (50%), Gaps = 54/335 (16%)
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
M E+A+ I G N +GTP NP P+ +PGGSSSGSA AV AK DF+LGTDTGGS+R+PA
Sbjct: 1 MHELAFGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPA 60
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+FG +P+ VS GV P + S D VG FA +++ + +Q+ D +P+
Sbjct: 61 ACCGVFGLKPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKA----MQIIDPT--FKPT 114
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS----LQHFL 258
+ A + L + + +D II N I + K + + ++HF
Sbjct: 115 EFTSAPN-LAVLDVSADE----------------IIWNCIYQAFQKANLQTTSEKVEHF- 156
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
AA + M+++ YE G+ T +G ++ R+ +A T+
Sbjct: 157 -------------EAAYDAGMQII-NYENWQAFGELTQTGL--IGSDVNGRLLKAAHTTL 200
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSL 374
+++ + V+ +L L ALL + LV+PT+P PPK+ + + R F+L
Sbjct: 201 EQVKQAEVVRAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPFNL 260
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
SG +S+PL + LPV + +++KH D
Sbjct: 261 ------SGHPAISVPLETSEGLPVGLQIVSKHQKD 289
>gi|399155297|ref|ZP_10755364.1| glutamyl-tRNA(Gln) amidotransferase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 479
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 178/407 (43%), Gaps = 40/407 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ KD+F G ++ G+ AT+TA +L + GA IG+ M E
Sbjct: 73 PLHGVPLLHKDMFYRTGKISACGSKICEDYVPDATATA--LLKLDQAGALDIGRLKMVEF 130
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY + G N+ G NP P+ +PGGSSSG A AV L SLG+DTGGS+R PAS CG
Sbjct: 131 AYGLTGHNEITGDVRNPWNPEYIPGGSSSGPAAAVAGFLSYGSLGSDTGGSIRFPASCCG 190
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRV--GRVLLQLADDVNLVRP 201
+ G +P++ VS G +P++ S D +G D +L ++ G+ D + +P
Sbjct: 191 LVGMKPTYGRVSRFGAMPLSFSLDHIGPLTRTVADCALLTQIIAGK---DTNDSTSYYQP 247
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGG--HIIENVILGDYVKDKVPSLQHFLS 259
LS I S QGL V +G + + + ++ SL F S
Sbjct: 248 KPEF-------LSGIESG--IQGLKIGVPTTYGNGPSGFLDPLHPEVQREMETSLAVFRS 298
Query: 260 EGNKEQEYSIPSLAALSSAM-RLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
G K E +P +S+ M ++ E + H +W+ D G ER+ + SA
Sbjct: 299 LGAKVVEIPLPENFEISNNMANIIAGAESSSAHANWLKEQPEDYGSQTRERLLTGLLFSA 358
Query: 319 -QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFR---- 368
+D + K L L + +L P VP P P L Q +P +E
Sbjct: 359 VDYLDALKLRKVILEDFLKQVFDKVDVLHAPVVPIPVPTLEESNIQANPGFIEYLTLLGH 418
Query: 369 -ARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLL 413
R F L G +S+P GL DN LP L+A + L
Sbjct: 419 FTRPFDYL------GLPALSVPAGLTDNGLPSGFQLVAPPFEEALLF 459
>gi|399987321|ref|YP_006567670.1| amidase [Mycobacterium smegmatis str. MC2 155]
gi|399231882|gb|AFP39375.1| Amidase [Mycobacterium smegmatis str. MC2 155]
Length = 438
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 179/402 (44%), Gaps = 45/402 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA-ATSTAPAVLAVLSGGATSIGKTIMDEM 86
L G+ A+KD+ DV GHVT G+ H AT+ A V + + GA +G+ ++ E
Sbjct: 73 LHGIPVAVKDLVDVAGHVTTRGSV----VHPGPATADAECVRRLRTAGAVIVGRNVLHEF 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ G+ +G NP P R+ GGSS GSAVA A +V ++GTDT GSVRVPA+ CG
Sbjct: 129 AFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVPAALCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P++ A+ GV P+A S D VG FA + + D VR +V +
Sbjct: 189 VVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAGRSPDP--VRAQRVAW 246
Query: 207 AE-DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHFLSEGNKE 264
+ CL P D + E L I + +G + +V L
Sbjct: 247 LDPACLG----PCDPAIIAALS--ETLRAAQITVDGTVGLPFAAGEVFEALSVLQSSEAY 300
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
EYS E + D V L G W+ VR Q
Sbjct: 301 TEYS----------------AETEQRASDIDPEVLGRLLRGRDTPAWQYVRACRQ----- 339
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRARAFSLLSIAG 379
+ LRAA LL +L +P P ++ Q+D A+EV R+ SL
Sbjct: 340 ---RDRLRAAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEV-RSALLSLTCPWN 395
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++G +S+P G+ LPV + L++ G++G L +L + +
Sbjct: 396 LTGHPALSVPAGVVSGLPVGLQLISAPGNEGMLFDLAARIEH 437
>gi|300705048|ref|YP_003746651.1| glutamyl-tRNA amidotransferase/amidase (gata) [Ralstonia
solanacearum CFBP2957]
gi|299072712|emb|CBJ44065.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum CFBP2957]
Length = 448
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 185/413 (44%), Gaps = 53/413 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G V+ G+ A AT+ A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPATADAVAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+PA++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G LA+ V+ + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGG-----------------PLANSVDCCAIVDAVLS 234
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++P + GL + + G +++ + + + ++ G + +
Sbjct: 235 GQALDTDAVPLAGLRLGLTRD----YVGADLDDTVATAFQR----AVMRLEQAGARIVRF 286
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHG-----DWVTTVKPDLGPGISE---RVWEAVR---- 315
P LLQ E G W +P L ++ RV +R
Sbjct: 287 DFPE---------LLQLPEINGGGGLPAAESWAWH-RPHLARAEAQYDRRVAARIRRGEQ 336
Query: 316 -TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFS 373
T+A +DV + + + AA LG+ ++PTV PP++ ++ + FR A
Sbjct: 337 MTAAAYLDV-MAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDTQFFRTNALV 395
Query: 374 LL--SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L S+ C +++P+ LPV +SL D +L + + L+
Sbjct: 396 LRNPSVINFLDGCALTLPIHGAGELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|160901696|ref|YP_001567277.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Petrotoga mobilis
SJ95]
gi|160359340|gb|ABX30954.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Petrotoga mobilis
SJ95]
Length = 453
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 200/424 (47%), Gaps = 43/424 (10%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G+ F +KD V+G T G+ +S T+TA V +L G T +GKT MDE A
Sbjct: 45 GIPFLVKDNILVEGTKTTNGSKILENYNSPYTATA--VERLLKAGFTVVGKTNMDEFAMG 102
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
E+ +G NP RVPGGSS GSA AV A V FSLG+DTGGSVR PA++CG+ G
Sbjct: 103 NTNEHSAFGPVRNPKDLARVPGGSSGGSAAAVAAGYVPFSLGSDTGGSVRQPAAFCGVVG 162
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL--------LQLADDVNLVRP 201
F+PS+ +S G+ + S D +G FA + K V ++ L D +LV+
Sbjct: 163 FKPSYGMISRYGLTAFSSSLDQIGVFANNVKDARTVTEIMKGKDPKDSTTLEHDKDLVKD 222
Query: 202 SQVIFAEDCLQLSSI-----PSDRVTQGLVKSVEKLFG-GHIIENVILGDYVKDKVPSLQ 255
++ ++ + + + D V + +++ L G I++ VKD +P L+
Sbjct: 223 VEIDLSKTKICIPKVVYHENADDNVIKQFERAINFLRSKGAIVD-------VKD-IPELE 274
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNN----HGDWVTTVKPDLGPGISER 309
+ ++ Y I + A SS + +Y +N+ + + +T + G + R
Sbjct: 275 YSVA------IYYIIAPAEASSNLSRYDGVKYGLRNDALGLNRMYKSTREVGFGMEVKRR 328
Query: 310 VWEAV-RTSAQKIDVCQSVKTELRAALS----ALLGDHGILVIPTVPGPPPKLQMDPSAL 364
+ S+ D S +++R LS +L D+ +++ PT P PPK+ L
Sbjct: 329 IMMGTFNLSSLYYDQYYSKASKVRKLLSDKIKEVLNDYNLIMTPTSPVLPPKIGEKLKPL 388
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ + F++ A ++G +SIP G LP I + ++ D LL + +
Sbjct: 389 DYYLMDIFTIP--ANLNGSPAISIPFGDVQGLPFGIQFIGRYMKDEELLTIADNFFKETS 446
Query: 425 EELQ 428
EL+
Sbjct: 447 RELK 450
>gi|359796667|ref|ZP_09299262.1| amidase [Achromobacter arsenitoxydans SY8]
gi|359365414|gb|EHK67116.1| amidase [Achromobacter arsenitoxydans SY8]
Length = 449
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 187/405 (46%), Gaps = 39/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWART-HSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
+ GL +IKD+FD++G T G+ AR A A V +++ GA IG+T M E
Sbjct: 69 VEGLPISIKDLFDIEGETTMAGS--VAREGEPVADENAEVVQRLIAAGAVIIGRTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP NP A R+PGGSSSG+AV+V + +G+DTGGSVR+PA+
Sbjct: 127 AYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPAAL 186
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS VS GV+P++ + D++G A + + +L D + +P V
Sbjct: 187 CGLTGFKPSAWRVSMKGVLPLSANLDSIGPIAASVRCCAELDAIL--SGDGGPVPQPLPV 244
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
L+L +IP+ + K V F ++Q G
Sbjct: 245 ----RGLRL-AIPTKLALDAMDKHVSDTFAA-----------------AVQRLQDAGALV 282
Query: 265 QEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTSAQKI 321
IP A L++ + E H D + P + R+ T+A +
Sbjct: 283 DRIEIPEFAELAAINSKGGFTAAEAWAWHRDLIARAGKRYDPRVVSRIMRGQDMTAADYL 342
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
D+ + + + AA+ + + L++PT P P + ++ + + A +L +
Sbjct: 343 DLLDAREAWV-AAVDHRIAGYDALIMPTTPIVAPAVADLQASDDAYYAANGLILRNPTLI 401
Query: 382 GF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL---VETLH 420
F C +S+P + PV + + +G+D +L + VE L+
Sbjct: 402 NFLDGCALSLPCHAPGSAPVGLMIAGSNGADRRILGIGLAVEDLY 446
>gi|154245002|ref|YP_001415960.1| amidase [Xanthobacter autotrophicus Py2]
gi|154159087|gb|ABS66303.1| Amidase [Xanthobacter autotrophicus Py2]
Length = 369
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 186/392 (47%), Gaps = 48/392 (12%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G A+KD D+ G T G+ A + AT A V L+ G +GKT + E+A+
Sbjct: 14 GPRVAVKDTIDIAGEPTMAGSRALADA-APATEHAEVVARALAAGCRIVGKTTLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N GTP NP P VPGGSSSGSA AV A L DF+LGTDTGGSVR+PA+ CG+FG
Sbjct: 73 VTGINDWSGTPENPKWPHLVPGGSSSGSAAAVAAGLADFALGTDTGGSVRIPAACCGVFG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ VS GV+P + D VG A +L R + ++ P+ FA
Sbjct: 133 LKPTFGRVSRHGVMPTDSTIDCVGPIATSADMLMRA----------MEIIDPT---FAR- 178
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
S+ + R+ + VK+ + H N + + G + ++ +
Sbjct: 179 ----RSVNAPRIGRVAVKANPAI---HRAVN--------------EALAASGVESRDVKL 217
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
L A SA + E G + T +G ++ R+ +A + ++I + V+
Sbjct: 218 AGLEAAFSAGLAIINAENVTGLGHLLQTGL--VGDDVARRLAQAAAVTREEIAAAEFVRA 275
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFR-ARAFSLLSIAGVSGFCQ 385
A + ALL +LV+PT+P PP L + D SA+ + R F+L SG
Sbjct: 276 AFTAEIDALLEALDVLVLPTMPEFPPALAEARGDLSAVGMTTFVRPFNL------SGHPA 329
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
V++PL + P + ++ + G D +L + E
Sbjct: 330 VTVPLLAENGAPAGLQIVGRKGEDALVLAVAE 361
>gi|284039348|ref|YP_003389278.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Spirosoma
linguale DSM 74]
gi|283818641|gb|ADB40479.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Spirosoma linguale
DSM 74]
Length = 479
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 188/418 (44%), Gaps = 62/418 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ IKD+ GH G+ + A TA AV +L IG+ DE A
Sbjct: 68 LAGMVVGIKDVLSYTGHGVRAGSKIL--DNFTAQFTATAVQRLLDEDVIIIGRQNCDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ EN +G N RVPGGSS GSAVAV A L S+G+DTGGSVR PA++CG+
Sbjct: 126 MGSSNENSSFGPVLNAADTSRVPGGSSGGSAVAVQAGLCLASIGSDTGGSVRQPAAFCGV 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL-------ADDVNLV- 199
G +P++ +S G+I A SFD +G I N V L L A D +
Sbjct: 186 VGLKPTYGRISRWGLIAYASSFDCIG------PIANTVDDAALLLEIMAGPDAFDSTVSS 239
Query: 200 -------------RPSQVIFAEDCLQLSSI-PSDR-VTQGLVKSVEKLFGGHIIENVILG 244
RP ++ + D ++ S + PS R TQ + ++ K GH +E V +
Sbjct: 240 QPVSAYSQATLPDRPLRIAYLRDGIESSGVDPSIREATQAKIDALRK--AGHTVEPVDI- 296
Query: 245 DYVKDKVPSLQHFLSEGNKEQ--------EYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
+K +P+ + L+ Y SL+ + A+ LL Y+ G +
Sbjct: 297 SLIKYLLPTY-YILTTAEASSNLSRFDGVRYGYRSLSNDTPALDLLSLYKKSRTEG-FGA 354
Query: 297 TVKPDLGPG---ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP 353
V+ + G +S ++A T AQ+ V+ +R L + L+ PT P P
Sbjct: 355 EVRKRILLGTFALSASYYDAYYTKAQQ------VRRLIRQEAEQLFEQYDFLLSPTTPTP 408
Query: 354 PPKL------QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLA 404
+L + L+++ A F++ A V G+ +SIP G N LP+ I L+A
Sbjct: 409 AFRLGEKTGGSANDDPLQMYLADIFTVQ--ANVVGYPAISIPAGTDANGLPIGIQLMA 464
>gi|118470455|ref|YP_887305.1| amidohydrolase [Mycobacterium smegmatis str. MC2 155]
gi|118171742|gb|ABK72638.1| amidohydrolase, AtzE family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 447
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 179/402 (44%), Gaps = 45/402 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA-ATSTAPAVLAVLSGGATSIGKTIMDEM 86
L G+ A+KD+ DV GHVT G+ H AT+ A V + + GA +G+ ++ E
Sbjct: 82 LHGIPVAVKDLVDVAGHVTTRGSV----VHPGPATADAECVRRLRTAGAVIVGRNVLHEF 137
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ G+ +G NP P R+ GGSS GSAVA A +V ++GTDT GSVRVPA+ CG
Sbjct: 138 AFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVPAALCG 197
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P++ A+ GV P+A S D VG FA + + D VR +V +
Sbjct: 198 VVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAGRSPDP--VRAQRVAW 255
Query: 207 AE-DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHFLSEGNKE 264
+ CL P D + E L I + +G + +V L
Sbjct: 256 LDPACLG----PCDPAIIAALS--ETLRAAQITVDGTVGLPFAAGEVFEALSVLQSSEAY 309
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
EYS E + D V L G W+ VR Q
Sbjct: 310 TEYS----------------AETEQRASDIDPEVLGRLLRGRDTPAWQYVRACRQ----- 348
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRARAFSLLSIAG 379
+ LRAA LL +L +P P ++ Q+D A+EV R+ SL
Sbjct: 349 ---RDRLRAAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEV-RSALLSLTCPWN 404
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++G +S+P G+ LPV + L++ G++G L +L + +
Sbjct: 405 LTGHPALSVPAGVVSGLPVGLQLISAPGNEGMLFDLAARIEH 446
>gi|441208125|ref|ZP_20973851.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Mycobacterium smegmatis MKD8]
gi|440627599|gb|ELQ89407.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Mycobacterium smegmatis MKD8]
Length = 447
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 179/402 (44%), Gaps = 45/402 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA-ATSTAPAVLAVLSGGATSIGKTIMDEM 86
L G+ A+KD+ DV GHVT G+ H AT+ A V + + GA +G+ ++ E
Sbjct: 82 LHGIPVAVKDLVDVAGHVTTRGS----VVHPGPATADAECVRRLRTAGAVIVGRNVLHEF 137
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ G+ +G NP P R+ GGSS GSAVA A +V ++GTDT GSVRVPA+ CG
Sbjct: 138 AFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVPAALCG 197
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P++ A+ GV P+A S D VG FA + + D VR +V +
Sbjct: 198 VVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAGRSPDP--VRAQRVAW 255
Query: 207 AE-DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHFLSEGNKE 264
+ CL P D + E L I + +G + +V L
Sbjct: 256 LDPACLG----PCDPAIIAALS--ETLRAAQITVDGTVGLPFAAGEVFEALSVLQSSEAY 309
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
EYS E + D V L G W+ VR Q
Sbjct: 310 TEYS----------------AETEQRASDIDPEVLGRLLRGRDTPAWQYVRACRQ----- 348
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRARAFSLLSIAG 379
+ LRAA LL +L +P P ++ Q+D A+EV R+ SL
Sbjct: 349 ---RDRLRAAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEV-RSALLSLTCPWN 404
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++G +S+P G+ LPV + L++ G++G L +L + +
Sbjct: 405 LTGHPALSVPAGVVSGLPVGLQLISAPGNEGMLFDLAARIEH 446
>gi|83746058|ref|ZP_00943113.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia
solanacearum UW551]
gi|207742446|ref|YP_002258838.1| amidase protein [Ralstonia solanacearum IPO1609]
gi|83727241|gb|EAP74364.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia
solanacearum UW551]
gi|206593836|emb|CAQ60763.1| amidase protein [Ralstonia solanacearum IPO1609]
Length = 448
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 185/413 (44%), Gaps = 53/413 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G V+ G+ A A + A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPAAADAVAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+PA++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G LA+ V+ + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGG-----------------PLANSVDCCAIVDAVLS 234
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++P + GL + + G +++ + + + ++ G + +
Sbjct: 235 GQALDTDAVPLAGLRLGLTRD----YVGADLDDTVATAFER----AVMRLEQAGARIVRF 286
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHG-----DWVTTVKPDLGPGISE---RVWEAVR---- 315
P LLQ E G W +P L ++ RV +R
Sbjct: 287 DFPE---------LLQLPEINGGGGLPAAESWAWH-RPHLARAEAQYDRRVAARIRRGEQ 336
Query: 316 -TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFS 373
T+A +DV + + + AA LG+ ++PTV PP++ ++ + FR A
Sbjct: 337 MTAAAYLDV-MAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDTQFFRTNALV 395
Query: 374 LL--SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L S+ C +++P+ D LPV +SL D +L + + L+
Sbjct: 396 LRNPSVINFLDGCALTLPIHAADELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|84489009|ref|YP_447241.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosphaera
stadtmanae DSM 3091]
gi|109891957|sp|Q2NHN5.1|GATA_METST RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|84372328|gb|ABC56598.1| GatA [Methanosphaera stadtmanae DSM 3091]
Length = 455
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 210/464 (45%), Gaps = 80/464 (17%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQL-----------PLSGLTFAIKDIFDVDGHVTGFG 49
+ ++ D AF++ + + +A + L+GL IK +V+ +
Sbjct: 28 IEEKNDDINAFVQLDIEKARKTAEDIDKRIKNNEETGKLAGLVIGIKSNINVEDFIISAA 87
Query: 50 NPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRV 109
+P + + +T + +L IG T MDE A + E YG NP AP +
Sbjct: 88 SPTLKNYYGSYNATV--INRILDEDGVIIGLTNMDEFAAGSSTETSMYGPTNNPKAPGHI 145
Query: 110 PGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSF 169
PGGSS GSA A+ A + D +LG+DTGGS+R PAS+CG+ GF+P++ VS G++ +A S
Sbjct: 146 PGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGVMGFKPTYGMVSRQGLLDLAMSL 205
Query: 170 DTVGWFA------------------WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCL 211
D +G FA +D +N+ L+ D N Q I
Sbjct: 206 DQIGPFANDTTGIGLMLNVICGYDPYDTTTINKQPEDFLK--DTTNSTLEGQTIGV--VK 261
Query: 212 QLSSIPSDRVTQGLVKSVEKL--FGGHI----IENVILGDYVKDKVPSLQHFLSEGNKEQ 265
+ I D++T + KS++ + G I E++ LG +P+
Sbjct: 262 EFMDITDDKITSQINKSIDDMTSLGAEIKELSFEDINLG------LPT------------ 303
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV-------KPDLGPGISERVWEAVRTSA 318
Y + + SA R +Y+ + +G+ + V + ++G IS++ + S
Sbjct: 304 -YYLINYVEFFSATR---KYDGR-KYGERIEEVCGAEVARRIEIGSYISQKEF-----SG 353
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI- 377
+ + ++ +R + LL D ++ PTVP P K+ + ++++ A+ +L++
Sbjct: 354 KYYNKALQARSLIRNEFNELLNDVDVIAGPTVPKLPHKIGEEIETMDMY---AYDVLTVL 410
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
A ++G S+ GL DN+PV + L AK D +L+ + L N
Sbjct: 411 ANITGIPASSMNSGLVDNIPVGLQLQAKPEDDHKILSTMSALEN 454
>gi|357386734|ref|YP_004901458.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pelagibacterium halotolerans B2]
gi|351595371|gb|AEQ53708.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pelagibacterium halotolerans B2]
Length = 436
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +IKD+FD G VT G+ A A + A AV + + GA G+T M E
Sbjct: 66 PLAGILVSIKDLFDEKGQVTSAGSTILADAEPA-NADAEAVGRLRAAGAIGCGRTTMSEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS G N H+G P N R+ GGS+SG A++V + D +LG+DTGGSVR+PA+ G
Sbjct: 125 AYSGVGLNPHFGNPGNIFDSSRISGGSTSGGALSVALGIADVALGSDTGGSVRIPAALNG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+ GF+PS SAV G P++QS+D++G A K + V VL
Sbjct: 185 LCGFKPSQSAVPLDGAFPLSQSYDSIGPLARTIKHCSAVHAVL 227
>gi|357023884|ref|ZP_09086051.1| amidase [Mesorhizobium amorphae CCNWGS0123]
gi|355544164|gb|EHH13273.1| amidase [Mesorhizobium amorphae CCNWGS0123]
Length = 432
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 175/405 (43%), Gaps = 35/405 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G +IKD+FDV G T G+ A A A V + GA +GKT M E
Sbjct: 52 PLDGTIVSIKDLFDVAGEPTTAGSLMLANAAPAGRD-AVIVRRLRQAGAVILGKTNMTEF 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G+N HYG P N +PGGSSSG+ VAVG + S+G+DTGGSVR+PAS G
Sbjct: 111 AFTAIGDNLHYGIPGNAADASLIPGGSSSGAGVAVGEGTSEVSIGSDTGGSVRIPASLNG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V G P++++ D++G A R + Q A
Sbjct: 171 VVGFKPTARRVPRDGAFPLSRTLDSIGPLA----------RSVAQCA------------- 207
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A D + P+ V L + G + E G+ L+ + +
Sbjct: 208 AADEVMAGGEPALLVPASLAGLRIGIPRGVLFEEA-EGEVATAFDLCLRKVELADARVAD 266
Query: 267 YSIPSLAA-LSSAMR--LLQRYEFKNNHGDWVTT-VKPDLGPGISERVWEAVRTSAQKID 322
SI L A + +A R + E H DW+ T + P +S + A+ A
Sbjct: 267 LSIDDLLADMRAATRRGTIAAMEGAEVHADWLATGASVPVDPHVSGPLSRALAVPASAYI 326
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL----SIA 378
+TEL AA+ L +L +PT P P + + E R R LL IA
Sbjct: 327 RTIRRRTELAAAMDKRLASIDVLALPTTPIVAPSIAA-MAGDEALRERTEGLLLRNTQIA 385
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +S+P+ PV + L+A++G D L + + L
Sbjct: 386 NQFDLCAISLPMP-GTARPVGLMLVARNGHDHHLFQIAAGIEALL 429
>gi|449125374|ref|ZP_21761676.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
OTK]
gi|448939343|gb|EMB20260.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
OTK]
Length = 485
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 186/425 (43%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + ++ +T + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATV--IDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F +P + + L +A
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEP---DDIALALAVMAGKDEKDET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKIAIPKEF----LNTQGLDPEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDTGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|421139242|ref|ZP_15599284.1| hypothetical protein MHB_08126 [Pseudomonas fluorescens BBc6R8]
gi|404509617|gb|EKA23545.1| hypothetical protein MHB_08126 [Pseudomonas fluorescens BBc6R8]
Length = 441
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 95/152 (62%), Gaps = 6/152 (3%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A KD+FDV G +T G + R A AP+V + G S+GKT +
Sbjct: 54 PLSVFDGVPLAWKDLFDVAGSITTAGAA-YRRNAPAVLLDAPSVGLLCRAGMVSVGKTNL 112
Query: 84 DEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
E+AYS G N H+GTP NP + D R+PGGSSSGSAVAV A +V ++GTDT GS+R+P
Sbjct: 113 SELAYSGLGLNPHFGTPHNPASVDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIP 172
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
A+ G+ G+R S S GV P+A + D++G
Sbjct: 173 AALNGVVGYRSSCRRYSRDGVFPLAHTLDSLG 204
>gi|386775184|ref|ZP_10097562.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Brachybacterium paraconglomeratum LC44]
Length = 475
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 181/412 (43%), Gaps = 34/412 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL A+KD DV G VT G+ + R H T +A V + GA +G T + E A
Sbjct: 72 LDGLPVAVKDNLDVAGRVTTMGS-EIFRDH-VPTGSAAVVDRLEEHGAVRLGATNLHEFA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ EN H+G NP R PGGSS GSAVAV + + +LGTDT GS+R+PA+ CGI
Sbjct: 130 LGVTTENPHHGICRNPWDTSRTPGGSSGGSAVAVASGMALAALGTDTSGSIRIPAAACGI 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ +S+ G P A S D VG VL D L+ +
Sbjct: 190 VGLKPTYGRISSVGCYPEAWSLDHVG--------------VLTSSVADAALLL--DTLSG 233
Query: 208 EDCLQLSSIPSDRVT--------QGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
D SS+P T + L VE+ F I+ + G V++ +L+
Sbjct: 234 HDPRGPSSLPLPPTTSRQELDDPRPLRIGVEEEFFFAGIDPAVEG-IVRE---ALEGLTR 289
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
G S+PSL+ A+ ++ E H + G + V +A
Sbjct: 290 AGATLVPISLPSLSDAVFALTVIDTAETTAFHETQLRRHGELYGEDVRRLVECGALATAV 349
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVFRARAFSLLSIA 378
Q +++ +RA + D ++ PT+P P++ + V R R L+ +
Sbjct: 350 DYVRAQQIRSLVRAEFARAFADVDVIASPTLPIRTPRIGETSVEVGGVTRDRDAELMRLV 409
Query: 379 G---VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
G ++G VS+P G+ D +PV + L+ +G +L + + + L
Sbjct: 410 GPSNLAGIPSVSVPCGMLDGMPVGLQLIGPALGEGAVLRAAAAVESLVPPRL 461
>gi|421464879|ref|ZP_15913568.1| amidase [Acinetobacter radioresistens WC-A-157]
gi|400204808|gb|EJO35791.1| amidase [Acinetobacter radioresistens WC-A-157]
Length = 370
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 182/391 (46%), Gaps = 50/391 (12%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
QL LT +KD ++ G T G+ T AA + A V +L+ KT +
Sbjct: 9 QLGSGKLTVMVKDSINIQGVKTISGSRALEDTAPAARN-AEVVEHILNADCMITAKTNLH 67
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+A+ I G N YGTP NP + +PGGSSSGSA AV A L DF+LGTDTGGS+R+PA+
Sbjct: 68 ELAFGITGINHAYGTPVNPKYLELIPGGSSSGSAAAVAANLADFTLGTDTGGSIRMPAAC 127
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG++G +P+ VS GV P S D VG FA +++ + ++ P+
Sbjct: 128 CGVYGLKPTFGRVSRQGVHPAQSSLDCVGPFANSVEMIETA----------MQIIDPT-- 175
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A+D + +V Q + E ++++L + N +
Sbjct: 176 FTAQDSAAAPKLAWLKVQQAEAEVTE----------------------CIENYLKQANLQ 213
Query: 265 QE--YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E + A + M+++ YE +G+ + T +G + R+ +A T+ +++
Sbjct: 214 VEPVEAASFEKAFHAGMQII-NYENWQAYGELIKTGL--IGADVQGRLLKAAETTLEQVQ 270
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR----ARAFSLLSIA 378
+ VK E + ALL + L++PT+P PPK+ + + R F+L
Sbjct: 271 QAEQVKAEFTQEIDALLEQYDALLLPTLPKIPPKVADAENTVAFLNLTGLVRPFNL---- 326
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
SG +SIPL PV + ++ K +D
Sbjct: 327 --SGHPAISIPLETEQGSPVGLQIVTKRNAD 355
>gi|384214785|ref|YP_005605949.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA
6]
gi|354953682|dbj|BAL06361.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA
6]
Length = 601
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 185/423 (43%), Gaps = 25/423 (5%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+ D A EK + +SS LPL G+ A+KD D G T P ++ T T +
Sbjct: 49 EKDAIAEAEKLAARDASS---LPLYGVPVAVKDNIDALGFPTTAACPAFSYTP---THDS 102
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
AV + + GA IGKT +D+ A + G YG P N D +PGGSSSGSAVAVGA
Sbjct: 103 TAVERLRAAGAIIIGKTNLDQFATGLVGVRSPYGIPKNSIREDLIPGGSSSGSAVAVGAG 162
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW--DPKIL 182
LV SLGTDT GS RVPA I G +PS +STAG++P ++ D + FA D L
Sbjct: 163 LVPLSLGTDTAGSGRVPAMLNNIVGLKPSLGMISTAGLVPACRTLDCISVFALTVDDAAL 222
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
AD + RP I + P++ + G+ ++ + +F G
Sbjct: 223 ALSVMAGPDQADPFSRDRPLGAI--------TPFPAN-LRLGVPRNGQLIFFGDRKAEAA 273
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL 302
GD +K + +L L E + E Y L L + +RY D + + +
Sbjct: 274 YGDALK-RWTALGAELVEFDLEPFYETARL--LYEGPWVAERYLVIK---DLLASAPDSI 327
Query: 303 GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS 362
P E R +A + LR + LV+PT P Q+ +
Sbjct: 328 HPVTREITVAGSRLTAAETFSALYRLQGLRKIAERTFTNIDALVLPTAPTAYTTAQVLAN 387
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHN 421
+E +R + + + C +++P + D +P I+LLA G D L ++ H
Sbjct: 388 PIE-LNSRLGTYTNFVNLLDLCGLAVPASMRADGIPFGITLLAPAGRDALLASIGRVFHA 446
Query: 422 TLK 424
K
Sbjct: 447 DTK 449
>gi|449118339|ref|ZP_21754752.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
H1-T]
gi|449123486|ref|ZP_21759812.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
MYR-T]
gi|448945793|gb|EMB26661.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
MYR-T]
gi|448953889|gb|EMB34678.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
H1-T]
Length = 485
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 186/425 (43%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + ++ +T + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATV--IDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F +P + + L +A
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEP---DDIALALAVMAGKDEKDET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKFAIPKEF----LNTQGLDPEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDAGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|421900087|ref|ZP_16330450.1| amidase protein [Ralstonia solanacearum MolK2]
gi|206591293|emb|CAQ56905.1| amidase protein [Ralstonia solanacearum MolK2]
Length = 393
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 186/413 (45%), Gaps = 53/413 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G V+ G+ A A + A AV + + GA +G+T M E A
Sbjct: 18 LAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPAAADAVAVARLRAAGAVLLGRTNMSEFA 76
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+PA++C +
Sbjct: 77 FSGLGLNPHYGTPRTPVDGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCAL 136
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G LA+ V+ + +
Sbjct: 137 TGFKPTARRVPMAGGVPLSTSLDSGG-----------------PLANSVDCCAIVDAVLS 179
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++P + GL + + G +++ ++ + + ++ G +
Sbjct: 180 GQALDTDAVPLAGLRLGLTRD----YVGADLDDTVVTAFER----AVMRLEQAGAHIVRF 231
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHG-----DWVTTVKPDLGPGISE---RVWEAVR---- 315
P LLQ E + G W +P L ++ RV +R
Sbjct: 232 DFPE---------LLQLPEINSGGGLPAAESWAWH-RPHLARAEAQYDRRVAARIRRGEQ 281
Query: 316 -TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFS 373
T+A +DV + + + AA LG+ ++PTV PP++ ++ + FR A
Sbjct: 282 MTAAAYLDV-MAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDTQFFRTNALV 340
Query: 374 LL--SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L S+ C +++P+ D LPV +SL D +L + + L+
Sbjct: 341 LRNPSVINFLDGCALTLPIHADDELPVGLSLCGLADDDARILRVGRAVEAALR 393
>gi|386824255|ref|ZP_10111392.1| amidase [Serratia plymuthica PRI-2C]
gi|386378839|gb|EIJ19639.1| amidase [Serratia plymuthica PRI-2C]
Length = 449
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 178/404 (44%), Gaps = 35/404 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ ++KD+FDV G T G+ A AA A V +L GA IGKT M E A
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLAAAPVAAKHAA-VVERLLQAGAVVIGKTNMTEFA 128
Query: 88 YSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP NP R+PGGSSSG+AVAV + S+G+DTGGSVR+PA++C
Sbjct: 129 YSGLGINPHYGTPANPWDRVVRRIPGGSSSGAAVAVAEGMCFGSIGSDTGGSVRIPAAFC 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+P+ +S G++P++ S D++G A D G ++L D RP Q
Sbjct: 189 GLTGFKPTARRISDGGLLPLSPSLDSIGVIAHD-----VAGCIVL---DTAIAERPLQPQ 240
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
++P V L + V F H+ SLQ ++ G + +
Sbjct: 241 LKNLSQARFAVPQTLVLDDLDEEVAAAF--HL---------------SLQRLVAAGAQIE 283
Query: 266 EY---SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
LAA+++A ++ +H + + P + R+ +
Sbjct: 284 HIPCAEFAELAAINAAGGFTALESWRWHHA-LIAEHAEEYDPRVLSRIRRGQPLGEGDLQ 342
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLLSIAG 379
+ ++ E + ++A + L++PTVP P L+ D A A S+
Sbjct: 343 QLRQLRAEWQRRVTAAVQMFDALLMPTVPLVAPTIAGLEADEDAYFSINGAALRNPSVIN 402
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +S+P PV + L D LL + L
Sbjct: 403 FLDGCALSLPCQRPGGAPVGLMLAGLPMHDEALLGWALAIERCL 446
>gi|440224646|ref|YP_007338042.1| allophanate hydrolase [Rhizobium tropici CIAT 899]
gi|440043518|gb|AGB75496.1| allophanate hydrolase [Rhizobium tropici CIAT 899]
Length = 600
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 174/401 (43%), Gaps = 30/401 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G T PD+A + A V + GA IGKT +D+
Sbjct: 67 PLWGIPFAVKDNIDVAGMPTTAACPDYAYMPD---TDATVVRLLKEAGALVIGKTNLDQF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G Y P N D VPGGSSSGSAVA +V F+LGTDT GS R+PA
Sbjct: 124 ATGLVGVRTPYPVPRNAMDADLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAGLNN 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL-LQLADDVNLVRPSQVI 205
I G +PS A+ST+GVIP ++ D V FA RV V A D S+ I
Sbjct: 184 IVGMKPSLGALSTSGVIPACRTLDCVSIFALTVDDAWRVFEVAGCPDAKDAY----SKTI 239
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A Q + +T G+ ++LF G + D ++ + L H L E
Sbjct: 240 PANGFRQAPPV----LTIGVPAKADRLFFGDAVMEAAYDDALR-MLTKLGHRLVEVPFGD 294
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
Y + +L L + +RY D+ + P V + A+++
Sbjct: 295 FYKVANL--LYEGAWVAERYAAVK---DFFDATEASFHP-----VTRGIYGGARQLSAAD 344
Query: 326 SVK-----TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+ K L+ ++ L+ + +PT P + ++ + +R + + +
Sbjct: 345 AFKGLYALQALKQKVAQLIASVDLFCVPTAPTHYTRADLEAEPIRE-NSRLGTYTNFVNL 403
Query: 381 SGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
C +++P G D P +++LL G DG +L +H
Sbjct: 404 LDMCGIAVPTGTRSDGRPASVTLLTSSGRDGLAASLARDIH 444
>gi|399040291|ref|ZP_10735692.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF122]
gi|398061661|gb|EJL53449.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF122]
Length = 453
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 177/422 (41%), Gaps = 66/422 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD+ G T G+ A + AA + AP V + G SIG T M E A
Sbjct: 72 LDGIPIAWKDLFDIKGRTTTAGSTVLA-SGPAAQADAPVVATLKQAGMVSIGCTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HY TP NP + D RVPGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 131 FSGLGLNPHYDTPHNPRSSDVPRVPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVG----------WF------AWDPKILNRVGRVL 189
GI G++ + AGV P+A+S D++G W A P I+ R + L
Sbjct: 191 GIVGYKATRGRYPMAGVYPLAKSLDSLGPLCRTVQDAVWIDAGMRGAAAPAIVARPLKGL 250
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
++V P V+F D G+V S E
Sbjct: 251 -------DIVIPDNVVF------------DGAEAGVVASFET------------------ 273
Query: 250 KVPSLQHFLSEGNKEQEYSIPS----LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
++ +EG IP+ LA ++ L+ F + D+
Sbjct: 274 ---AVDWLAAEGASISRIKIPAFDELLALMAQYGALVTAEAFALHRERLAGPQAADMDHR 330
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP--KLQMDPSA 363
+ R+ +T+ + L + L+GD + V PP LQ D
Sbjct: 331 VVMRIRLGEKTTLANYLAILDKRERLIGDVERLVGDSFVAFPSVVHVAPPIAPLQADDDL 390
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNT 422
+ + +C VSIP G D ++PV + L A D LL+ ++
Sbjct: 391 FFATNGKTLRNTLLGNFLDWCGVSIPCGTGDADMPVGLLLSALGKRDEALLSAALSVEEV 450
Query: 423 LK 424
++
Sbjct: 451 IR 452
>gi|374574268|ref|ZP_09647364.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
gi|374422589|gb|EHR02122.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
Length = 449
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 185/407 (45%), Gaps = 41/407 (10%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G+ +IKD+FD+ G VT G+ + S A AP V + G IG+T M E AY
Sbjct: 72 AGIPVSIKDLFDIKGQVTRAGSRALDDS-SPAEQDAPTVARLRKAGFVVIGRTNMTEFAY 130
Query: 89 SINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
S G N HYGTP A VPGGSSSG+AV+V + +LGTDTGGS R+PA+Y G
Sbjct: 131 SGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRIPAAYNG 190
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G++P+ V G +P++ S D++G A + VL + + ++P V
Sbjct: 191 VVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLAN--EPIAPLKPRSVKG 248
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFG-----GHIIENVILGDYVKDKVPSLQHFLSEG 261
+ ++I D + + + E+ G IIE + + ++ H +
Sbjct: 249 MRLAVP-TTIALDDLDAAVAGTFERALKSLADHGAIIERIEMAEF---------HDIGPM 298
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERVWEA-VRTSAQ 319
N + ++ +S RY + T K D+ P +S R+ +++A
Sbjct: 299 NAKGGFA-------ASESYAWHRY---------LLTSKGDVYDPRVSVRIMRGEAQSAAD 342
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA--RAFSLLSI 377
ID+ ++ L ++A + + LV+PT PPK+ E R RA ++
Sbjct: 343 YIDLLNERRS-LITRVNARIAPYDALVLPTTANTPPKISDLADDKEFTRENLRALRNCTL 401
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ C +S+P +PV + L GSD + L + ++
Sbjct: 402 INMIDGCAISLPAHREGEIPVGLMLAGAGGSDRRIFELAAGMEAVIR 448
>gi|384086375|ref|ZP_09997550.1| amidohydrolase, AtzE family protein [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 465
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 154/337 (45%), Gaps = 30/337 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FDV+G VT G+ R A+ A V + S GA +G M E A
Sbjct: 74 LAGVPFAVKNLFDVEGEVTLAGS-RINRRDDPASMDATLVQRMNSAGAVLLGALNMGEYA 132
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y GEN HYG NP R+ GGSS GS AV +V +LG+DT GS+RVP+S CGI
Sbjct: 133 YDFTGENIHYGPSRNPHDGSRMTGGSSGGSGAAVAGGMVPIALGSDTNGSIRVPSSLCGI 192
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FGF+P++ +S AG P S D VG A L RV +V+
Sbjct: 193 FGFKPTYGRLSRAGTFPFCPSLDHVGPMARSVTDLARV----------------YEVLQG 236
Query: 208 EDCLQLSSIPSDR--VTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS-----LQHFLSE 260
D +S+ DR V GL + V +L + I G Y + + + +Q
Sbjct: 237 YDHKDPASVQRDREPVISGLDEGVAQL------KIAIAGGYFRKQASTEAEQAIQKVADC 290
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+E I +A +A L+ E N H + + D P + +R+ A
Sbjct: 291 LGVNEEVEIAGVAQARAAAYLITNAESSNLHLERLRRYAGDYDPDVRDRMLAGTLLPASW 350
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ Q ++ RA L + H +L+ P P P++
Sbjct: 351 VIQAQRFRSYYRAELQKIFAKHDLLIAPATPMTAPQI 387
>gi|294627516|ref|ZP_06706099.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
gi|292598147|gb|EFF42301.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
Length = 486
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 167/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R H S AV+ L GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H AV GV P + D VG FA L RV
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRRV--------------------- 264
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +P+ + V + F ++ ++ G LQ L+ N
Sbjct: 265 -YDVLRGQPLPACHAGKLRVARLGGWFERNLDPDLEAG---------LQTLLAACNSLSS 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 315 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 375 FAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDDLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|254560151|ref|YP_003067246.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
gi|254267429|emb|CAX23268.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
Length = 616
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 186/427 (43%), Gaps = 50/427 (11%)
Query: 11 FMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAV 70
F L P A + PL G+ FA+KD DV G T PD+A S TAP V +
Sbjct: 50 FAAAAALGPFDPAEK-PLWGVPFAVKDNLDVVGLPTTAACPDFAFVPS---ETAPCVARL 105
Query: 71 LSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSL 130
L+ GA IGKT +D+ A + G + P N D VPGGSSSGSAVAV LV F+L
Sbjct: 106 LAAGAILIGKTNLDQFATGLVGLRTPHPAPRNALNADLVPGGSSSGSAVAVAHGLVAFAL 165
Query: 131 GTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL- 189
GTDT GS RVPA + G +PS +VS+ G++P ++ DTV FA +RV R++
Sbjct: 166 GTDTAGSGRVPAGLNNVVGLKPSLGSVSSRGLLPACRTLDTVSVFAGTVADADRVFRIMA 225
Query: 190 -LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
AD + P Q +P + G+ + FGG +
Sbjct: 226 GYDAADPYSRDLPVTT-------QPPGLPPG-LRVGMPDAASLRFGGDPLSEAAF----- 272
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
V L + + + + A+++ + Y+ G WV + P I E
Sbjct: 273 --VAGLDDLATLTGRPDAVDLAPMFAIAALL-----YD-----GPWVAERYQAVRPLI-E 319
Query: 309 RVWEAVRTSAQKIDVCQSVK------------TELRAALSALLGDHGILVIPTVPGP--P 354
R +A+ + + + + ELR A L +LV+PT P P
Sbjct: 320 RSPQALHPTTRAVIGRATAFTAADAFAGLYRLAELRRAADTLWEHIDVLVVPTYPRPVTC 379
Query: 355 PKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLL 413
+L++DP + + + + C +++P D LP ++L+A G DG L
Sbjct: 380 AELEVDPIGPN---SELGTYTNFVNLLDLCALAVPGRFRTDGLPAGLTLIAPRGRDGLLA 436
Query: 414 NLVETLH 420
L LH
Sbjct: 437 ALGARLH 443
>gi|240140543|ref|YP_002965023.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Methylobacterium
extorquens AM1]
gi|240010520|gb|ACS41746.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium
extorquens AM1]
Length = 611
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 184/430 (42%), Gaps = 67/430 (15%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L P A++ PL G+ FA+KD D+ G T PD+A T A TAPAV +L+ GA
Sbjct: 58 LGPFDPANK-PLWGVPFAVKDNVDIAGLPTTAACPDFAYTPQA---TAPAVERLLAAGAI 113
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+GKT +D+ A + G Y P N P VPGGSSSGSAVAV LV F+LGTDT G
Sbjct: 114 LVGKTNLDQFATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAG 173
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA---------------WDPK- 180
S RVPA I G +PS +VS GV+P ++ DT+ FA +DP+
Sbjct: 174 SGRVPAGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADVVFRVMAGYDPQD 233
Query: 181 -------ILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLF 233
+ R G + L V + + +IFA D L ++ G + ++ +
Sbjct: 234 PYSRALPVPPRPGALPPGL--RVGVPDAASLIFAGDALSANAF------DGALADLDTVI 285
Query: 234 GGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGD 293
GG + L F + Y+ P +A A+R F H +
Sbjct: 286 GGAAVTV------------DLAPFFAVAG--LLYAGPWVAERYQAIR-----GFIEEHPE 326
Query: 294 WVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP 353
L P + A SA ELR A A+ +LV+PT P P
Sbjct: 327 -------ALHPTTRAIIGAATGHSAADAFAGLYRLAELRRATEAVWRGIDVLVVPTYPRP 379
Query: 354 P--PKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDG 410
L DP + + + + C +++P D P ++L+A G+DG
Sbjct: 380 RRVADLAADPVGPN---SELGTYTNFVNLLDLCALAVPGRFRADGFPSGVTLIAPRGADG 436
Query: 411 FLLNLVETLH 420
+ L LH
Sbjct: 437 LIAELGACLH 446
>gi|134100032|ref|YP_001105693.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
gi|291002978|ref|ZP_06560951.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
gi|133912655|emb|CAM02768.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
Length = 445
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 175/392 (44%), Gaps = 38/392 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KDI + G T G+ +A +T+ A V + +GGA +GKT E
Sbjct: 79 PLHGIPVAVKDIIETAGMRTTMGSAHFA--DHVSTADAECVRRLRAGGAVIVGKTTTHEF 136
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY G+ G NP P + GGSS GSA AV A +V ++GTDTGGSVR+PA+ CG
Sbjct: 137 AYGPTGDRAAGGASRNPHDPAAMSGGSSGGSAAAVAAGMVPLAVGTDTGGSVRIPAALCG 196
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P++ AV GV P+++S D VG A P+ RVL L
Sbjct: 197 VAGFKPAYGAVPADGVFPLSRSLDHVGVIARTPRDCRTAYRVLAGL-------------- 242
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ P + G +V + G + E +V L G QE
Sbjct: 243 ------RAGPPR---SAGGPATVGWIAPGALFET-------DREVEELARAALSGRAVQE 286
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ A L +Q E H + V P + ER+ A RT +
Sbjct: 287 VELGDAAGLRQTYNGIQDAEAYAVHAERVADAPELFTPEVLERLQAAARTPGWRHVRAFE 346
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPP-----KLQMDPSALEVFRARAFSLLSIAGVS 381
+ RA ++ LL H +L +PT P P +++++ +EV R SL S ++
Sbjct: 347 ERQRWRAEVARLLSHHDLLALPTTPFAAPAVGQREIEVNGREVEV-RWGLLSLTSPWNIA 405
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
G +++P+G LPV + L+ + G + L
Sbjct: 406 GVPALTVPVGTSRGLPVGLQLVCRPGDEDLLF 437
>gi|418062273|ref|ZP_12700072.1| allophanate hydrolase [Methylobacterium extorquens DSM 13060]
gi|373564185|gb|EHP90315.1| allophanate hydrolase [Methylobacterium extorquens DSM 13060]
Length = 611
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 184/430 (42%), Gaps = 67/430 (15%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L P A++ PL G+ FA+KD D+ G T PD+A T A TAPAV +L+ GA
Sbjct: 58 LGPFDPANK-PLWGVPFAVKDDVDIAGLPTTAACPDFAYTPQA---TAPAVERLLAAGAI 113
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+GKT +D+ A + G Y P N P VPGGSSSGSAVAV LV F+LGTDT G
Sbjct: 114 LVGKTNLDQFATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAG 173
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA---------------WDPK- 180
S RVPA I G +PS +VS GV+P ++ DT+ FA +DP+
Sbjct: 174 SGRVPAGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADVVFRVMAGYDPQD 233
Query: 181 -------ILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLF 233
+ R G + L V + + +IFA D L ++ G + ++ +
Sbjct: 234 PYSRALPVPPRPGALPPGL--RVGVPDAASLIFAGDALSANAF------DGALADLDTVI 285
Query: 234 GGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGD 293
GG + L F + Y+ P +A A+R F H +
Sbjct: 286 GGAAVTV------------DLAPFFAVAG--LLYAGPWVAERYQAIR-----GFIEEHPE 326
Query: 294 WVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP 353
L P + A SA ELR A A+ +LV+PT P P
Sbjct: 327 -------ALHPTTRAIIGAATGHSAADAFAGLYRLAELRRATEAVWRGIDVLVVPTYPRP 379
Query: 354 P--PKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDG 410
L DP + + + + C +++P D P ++L+A G+DG
Sbjct: 380 RRVADLAADPVGPN---SELGTYTNFVNLLDLCALAVPGRFRADGFPSGVTLIAPRGADG 436
Query: 411 FLLNLVETLH 420
+ L LH
Sbjct: 437 LIAELGACLH 446
>gi|237798727|ref|ZP_04587188.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806160|ref|ZP_04592864.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021580|gb|EGI01637.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027273|gb|EGI07328.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 457
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 190/414 (45%), Gaps = 45/414 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPLSDSTPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+ G+ GFR + S GV P+A + D++G VR +
Sbjct: 190 FNGLVGFRSTSRRYSRDGVFPLALTLDSIGPLTRS--------------------VRDAL 229
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
VI +D L S PS + + L S L ++++ + V+D + L G
Sbjct: 230 VI--DDLLCARSKPSSLIPRSLA-SQRFLVDKAVLDDERVEPAVRDNLLRAIGILHAGGA 286
Query: 264 EQEYSIPSLAALSSAMRLLQRY------EFKNNHGDWVTTVKPD-LGPGISERVWEAVRT 316
E + A + + L++++ E H + + D L P + +R+ A
Sbjct: 287 LIE--VRPCQAFQATLLLIRQHGWLGAAEAFALHQPLLDSDAADQLDPRVRKRLEAARHM 344
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
A + + + +L+ L+A L D +L+ P+V P L + E+F + L
Sbjct: 345 PASLLVNLYNAREQLQEQLAAEL-DGALLLTPSVAHVAPPLAPLLADDELFVQTNLATLR 403
Query: 377 IAGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLN---LVETLHNTL 423
+ VS+P G+ LP + L A G D LL VE L N++
Sbjct: 404 LTMSGSLLNMPGVSLPSGVDAAGLPTGLLLSAPAGEDARLLRAALAVEALLNSV 457
>gi|325283276|ref|YP_004255817.1| Amidase [Deinococcus proteolyticus MRP]
gi|324315085|gb|ADY26200.1| Amidase [Deinococcus proteolyticus MRP]
Length = 388
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 183/408 (44%), Gaps = 64/408 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL+GLTF++KD+F V G P A T + AP+ L +L GA++ GKT +
Sbjct: 28 PLAGLTFSVKDLFGVAGW------PLSASTRALLPEVAPSPLVTHLLQLGASAAGKTHLH 81
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E+A I G N GT +P P V GGSSSG+AV + VDF+LGTDTGGS+R+PA++
Sbjct: 82 EIAMGILGANAFGGT-EHPFLPGHVTGGSSSGAAVTAALEQVDFALGTDTGGSIRIPAAW 140
Query: 145 CGIFGFRPS--HSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL----LQLADDVNL 198
CG++G++P+ H A TAGV+P++ + D G A + + RV L + D L
Sbjct: 141 CGLYGYKPTKDHPAWPTAGVLPLSPTCDHAGPLAREFGTIMRVHEALSGETVPPQDWAGL 200
Query: 199 ---VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQ 255
V Q D Q S G+ + +E+L G +++ V L D + P +
Sbjct: 201 RVGVWHPQGWLGADAQQALS--------GMAQRLEQL--GAVLQPVTLPDMLDAYSPIVG 250
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
H E H + P P I E++
Sbjct: 251 H-----------------------------EAAQVHAAALAQADPGFSPEILEKLRAGQA 281
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL----EVFRARA 371
++ + + E R L+ + +L+ P VP PP++ ++ AL R
Sbjct: 282 LGPAEMQAAYARREEYRTLLAGVFSSCDLLLAPAVPCCPPRIGVEEVALAGGPANIRPAV 341
Query: 372 FSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
L + + G V++P + D L + L+A G D LL LV L
Sbjct: 342 LRLTAPFSMLGSPAVAVPSAV-DWL--GVQLVAPWGEDARLLGLVREL 386
>gi|301384870|ref|ZP_07233288.1| hypothetical protein PsyrptM_19645 [Pseudomonas syringae pv. tomato
Max13]
gi|302062330|ref|ZP_07253871.1| hypothetical protein PsyrptK_20261 [Pseudomonas syringae pv. tomato
K40]
Length = 457
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 181/412 (43%), Gaps = 40/412 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 87 AYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+R+PA++
Sbjct: 131 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ GFR + S GV P+A + D+VG VR + V
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDALV 230
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I +D L S P+ + + L L ++E+ + V+D + L G
Sbjct: 231 I--DDLLCARSKPTSLLPRSLAGQ-RFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 287
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E A + ++++Q++ F + + L P + +R+ A
Sbjct: 288 IEMG--HCQAFQATLQVIQQHGWLGATEAFALHQSLLDSDAASQLDPRVRKRLEAARHMP 345
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + + L+ L+ L D +L+ P+V P L + E+F + L +
Sbjct: 346 ASLLVNLYAARERLQEQLTLEL-DGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRL 404
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
VS+P G LP + L A G D LL T+ + L +
Sbjct: 405 TMPGSLLNMPGVSLPSGCDASGLPTGLLLSAPAGEDARLLRAALTVESLLNQ 456
>gi|399010436|ref|ZP_10712809.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM17]
gi|398107159|gb|EJL97166.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM17]
Length = 386
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 190/408 (46%), Gaps = 63/408 (15%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA-------VLAVLSGGATSIGKTI 82
GL+ +KD D+ G+ T R S A APA V A+L G GKT
Sbjct: 30 GLSVMVKDTIDIAGYPT--------RASSNALVDAPAAGEHAQVVRALLGAGCRITGKTS 81
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
+ E+A+ G N GT NP P +PGGSSSGSA AV L DF+LGTDTGGSVR+PA
Sbjct: 82 LHELAFGTTGLNAWTGTAANPRYPGYIPGGSSSGSAAAVAGGLCDFALGTDTGGSVRIPA 141
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+FG +P+ +S GV+P + D VG A D + +L + + ++ P+
Sbjct: 142 ACCGVFGLKPTFGRISRQGVMPTHSTLDCVGPLARD----------MDRLIEAMGIIDPT 191
Query: 203 QVIFAEDCLQLSSIP-SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+ +P + + G+V +VE + N LG HF
Sbjct: 192 ----------FAPVPLPEHLAIGVV-AVEVHEQIQAVVNQALGR---------SHF---- 227
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
K E ++P ++A A + E G + T + +G +++R+ A T+A+ +
Sbjct: 228 -KLLEQTLPGMSAAYGAGMAIINAETWAACGHLLQTGR--VGSDVADRLRAASLTTAKFV 284
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARA----FSLLSI 377
+ + + A + A L IL +PT+P P ++ ++ RA SL+
Sbjct: 285 EEAEITRRAFTAEVDAALAITPILAMPTMPDFPLRV------VDAADTRAALGMTSLVRA 338
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+SG +SIPL LP+ + L+A HG+D L + L L+E
Sbjct: 339 FNLSGHPALSIPLESASGLPIGLQLIAAHGADELLCAVARELVRRLEE 386
>gi|149277486|ref|ZP_01883627.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pedobacter sp.
BAL39]
gi|149231719|gb|EDM37097.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Pedobacter sp.
BAL39]
Length = 472
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 195/441 (44%), Gaps = 83/441 (18%)
Query: 28 LSGLTFAIKDIFDVDGH--------VTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
L+G+ IKD GH + GF +P +A V +L+ A IG
Sbjct: 68 LAGMVIGIKDNICYQGHEVTASSKMLEGFVSP----------YSATVVERLLAEDAIIIG 117
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
+ DE A + E +YG N P V GGSS GSAVAV A + +LGTDTGGSVR
Sbjct: 118 RLNCDEFAMGGSNETSYYGPVKNAANPALVAGGSSGGSAVAVQADMCLSALGTDTGGSVR 177
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRVGRVLLQLADD- 195
PA++CG G +P++ +S GVI A SFD VG D L V L AD+
Sbjct: 178 QPAAFCGAIGMKPTYGRISRYGVIAYASSFDQVGTITSSVSDAATLLEV----LAGADEA 233
Query: 196 ---------------VNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG-GHIIE 239
+ L P ++ ++ L+ ++ + + + ++ +VE+ GH +E
Sbjct: 234 DSTVSRLPVPEYNLGLQLSSPKKIAVLKETLESEALDPE-IKKAILAAVERFKSQGHTVE 292
Query: 240 NVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRY----------EFKN 289
V D + VP+ Y + + A SS L RY E K
Sbjct: 293 YVSF-DLLDYLVPA-------------YYVLTTAEASSN---LSRYDGVHYGHRNLEAKQ 335
Query: 290 NHGDWVTTVKPDLGPGISERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGI 344
+ + + G + R+ SA D Q V+ +R + A+L D+ +
Sbjct: 336 LNDLYKMSRTEGFGEEVKRRILLGTFVLSAGYYDAYYQKAQQVRRLIREKMEAMLMDYDV 395
Query: 345 LVIPTVPGPPPKLQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAI 400
++ P P PP K+ DP L ++ A F++L A ++G ++IPLG + LP+++
Sbjct: 396 VLSPVTPTPPFKIGENIEDP--LVMYMADIFTVL--ASLTGIPAIAIPLGNNSAGLPLSL 451
Query: 401 SLLAKHGSDGFLLNLVETLHN 421
L+AKH + L +L T N
Sbjct: 452 QLMAKHFGEQELFSLSHTFLN 472
>gi|213971106|ref|ZP_03399225.1| amidase family protein [Pseudomonas syringae pv. tomato T1]
gi|213924095|gb|EEB57671.1| amidase family protein [Pseudomonas syringae pv. tomato T1]
Length = 442
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 181/412 (43%), Gaps = 40/412 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G S A AP+V + G S+GKT + E
Sbjct: 57 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 115
Query: 87 AYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+R+PA++
Sbjct: 116 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 175
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ GFR + S GV P+A + D+VG VR + V
Sbjct: 176 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDALV 215
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I +D L S P+ + + L L ++E+ + V+D + L G
Sbjct: 216 I--DDLLCARSKPTSLLPRSLAGQ-RFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 272
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E A + ++++Q++ F + + L P + +R+ A
Sbjct: 273 IEMG--HCQAFQATLQVIQQHGWLGATEAFALHQSLLDSDAASQLDPRVRKRLEAARHMP 330
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + + L+ L+ L D +L+ P+V P L + E+F + L +
Sbjct: 331 ASLLVNLYAARERLQEQLTLEL-DGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRL 389
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
VS+P G LP + L A G D LL T+ + L +
Sbjct: 390 TMPGSLLNMPGVSLPSGCDASGLPTGLLLSAPAGEDARLLRAALTVESLLNQ 441
>gi|220908629|ref|YP_002483940.1| allophanate hydrolase [Cyanothece sp. PCC 7425]
gi|219865240|gb|ACL45579.1| allophanate hydrolase [Cyanothece sp. PCC 7425]
Length = 607
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
LPL G+ FAIKD D G T G P++A +AP V +++ GA IGKT +
Sbjct: 64 KNLPLYGIPFAIKDNLDWAGTPTTAGCPEFAYIPK---RSAPVVEKLIAAGAIPIGKTNL 120
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
D+ A + G YG NP + +PGGSS+GSAVAV A LV F LGTDT GS RVPA+
Sbjct: 121 DQFATGLVGTRTPYGICRNPFHQNYIPGGSSAGSAVAVSAGLVSFGLGTDTAGSGRVPAA 180
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
+ I G +PS +ST G++P +S D V F+ + R LL+L + + P
Sbjct: 181 FTNIVGLKPSRGYLSTTGLVPAVRSLDCVSIFS----LTCEEARYLLELVGEFDPADP 234
>gi|334116530|ref|ZP_08490622.1| allophanate hydrolase [Microcoleus vaginatus FGP-2]
gi|333461350|gb|EGK89955.1| allophanate hydrolase [Microcoleus vaginatus FGP-2]
Length = 604
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 176/421 (41%), Gaps = 59/421 (14%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
QLPL G+ FAIKD D G T G P +A T + +++ V + + GA +IGKT M
Sbjct: 68 QQLPLYGIPFAIKDNLDWAGVPTTAGCPPFASTPARSSAV---VERLCAAGAIAIGKTNM 124
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
D+ A + G YG NP +PGGSSSGSA AV A LV F+LGTDT GS RVPA+
Sbjct: 125 DQFATGLVGTRTPYGVCRNPFDSRYIPGGSSSGSATAVSAGLVSFALGTDTAGSGRVPAA 184
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+ I G +PS ++ T G++P +S D V FA L AD ++++ +
Sbjct: 185 FTNIVGLKPSCGSIGTRGLLPAVRSLDCVSVFA-------------LTCADAASVLQVAS 231
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
AED S P +V L + + G +E F
Sbjct: 232 GFDAEDA--FSRHPETKVLPDLSRLRVGVPGDGELE-----------------FFGNAEA 272
Query: 264 EQEY--SIPSLAALSSAMRLLQRYEFKNNH----------------GDWVTTVKPDLGPG 305
EQ Y +I L +L + + F + GD++ D+ P
Sbjct: 273 EQRYREAIARLQSLGCTIAPIDFKPFADAAELLYGGPWVAERLAAIGDFLDAHPEDIDPI 332
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG--PPPKLQMDPSA 363
+ E + R A ELR +L +PT ++ +P A
Sbjct: 333 VYEIISGGKRYDAVSAYRASYRLAELRQQAEIQWESMDVLAVPTTGTIYTVAEVAAEPIA 392
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNT 422
L R + A + C +++P G + LP ++L+A D L +L H +
Sbjct: 393 LNTNLGR---YTNFANLLDLCAIAVPSGFQSSGLPAGLTLMAPAWHDLSLCSLGAAFHAS 449
Query: 423 L 423
L
Sbjct: 450 L 450
>gi|222106852|ref|YP_002547643.1| hypothetical protein Avi_5886 [Agrobacterium vitis S4]
gi|221738031|gb|ACM38927.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4]
Length = 459
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 176/402 (43%), Gaps = 41/402 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A KD+FD+ G T G+ A+ A V A+ S G SIG+ M E
Sbjct: 76 PLDGIPIAWKDLFDLKGVTTTAGSVVL-DDQPPASRDADVVAALASAGMVSIGQVNMSEF 134
Query: 87 AYSINGENKHYGTPTNP--CAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP RVPGGSSSGSAVAV A LV S+GTDTGGSVR+P+++
Sbjct: 135 AFSGLGVNPHYGTPRNPHGVGEARVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAF 194
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
GI G++ + S GV P+++S D++G + V + A L P QV
Sbjct: 195 NGIVGYKATRGRYSMRGVFPLSKSLDSLG------PLCRTVQDAVWVDAAMRGLTHP-QV 247
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKV-PSLQHFLSEGNK 263
A + +P G V + F I G V+ + P +Q L K
Sbjct: 248 TRAALAGRRFVVPETVFFDGAEDGVVQAFEAAIRRLEQAGAVVRRQAFPIMQQILDALAK 307
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHG------DWVTTVKPDLGPGISERVWEAVRTS 317
+++ +L R+ HG D + LG IS
Sbjct: 308 HGPL-------VTAEAYVLHRHRL---HGPDAARMDHRVATRARLGENIS---------L 348
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARAFSL 374
A +++ + + +L + ++ +G ++ PTV P +L D +
Sbjct: 349 ANYVELVER-REQLISEFTSQIGADEFILTPTVAHVAPLTARLVADDDLFVAINGKTLRN 407
Query: 375 LSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNL 415
+ +C VS+P G D N+PV + + SD LL L
Sbjct: 408 TMLGNFLDWCAVSLPCGTGDANMPVGLQVSGPARSDEALLGL 449
>gi|302132260|ref|ZP_07258250.1| hypothetical protein PsyrptN_12753 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 457
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 181/412 (43%), Gaps = 40/412 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 87 AYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+R+PA++
Sbjct: 131 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ GFR + S GV P+A + D+VG VR + V
Sbjct: 191 NGLVGFRSTTRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDALV 230
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I +D L S P+ + + L L ++E+ + V+D + L G
Sbjct: 231 I--DDLLCARSKPTSLLPRSLAGQ-RFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 287
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E A + ++++Q++ F + + L P + +R+ A
Sbjct: 288 IEMG--HCQAFQATLQVIQQHGWLGATEAFALHQSLLDSDAASQLDPRVRKRLEAARHMP 345
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + + L+ L+ L D +L+ P+V P L + E+F + L +
Sbjct: 346 ASLLVNLYAARERLQEQLTLEL-DGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRL 404
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
VS+P G LP + L A G D LL T+ + L +
Sbjct: 405 TMPGSLLNMPGVSLPSGCDASGLPTGLLLSAPAGEDARLLRAALTVESLLNQ 456
>gi|449107657|ref|ZP_21744306.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ATCC 33520]
gi|448963094|gb|EMB43776.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ATCC 33520]
Length = 485
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 185/425 (43%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + ++ +T + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATV--IDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F +P + L +A
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEP---GDIAIALAVMAGKDEKDET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKIAIPKEF----LNTQGLDPEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDAGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|395500572|ref|ZP_10432151.1| hypothetical protein PPAM2_30997 [Pseudomonas sp. PAMC 25886]
Length = 447
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 94/152 (61%), Gaps = 6/152 (3%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A KD+FDV G +T G R AA AP+V + G S+GKT +
Sbjct: 60 PLSVFDGVPLAWKDLFDVAGSITTAGAAH-RRDAPAALLDAPSVGLLCRAGMVSVGKTNL 118
Query: 84 DEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
E+AYS G N H+GTP NP D R+PGGSSSGSAVAV A +V ++GTDT GS+R+P
Sbjct: 119 SELAYSGLGLNPHFGTPHNPSGIDQPRIPGGSSSGSAVAVAADIVPIAMGTDTAGSIRIP 178
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
A+ G+ G+R S S GV P+A + D++G
Sbjct: 179 AALNGVVGYRSSCRRYSRDGVFPLAHTLDSLG 210
>gi|405382677|ref|ZP_11036456.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF142]
gi|397320899|gb|EJJ25328.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF142]
Length = 456
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 181/413 (43%), Gaps = 48/413 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ A + A A V + + G +IG+T M E A
Sbjct: 72 LDGIPIAWKDLFDIEGMATTAGSVVLA-GDAPAEQDAAIVATLKNAGMLAIGRTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA+
Sbjct: 131 FSGLGINPHYGTPENPHSKDEPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAALN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA---WDPKILNRVGR------VLLQLADDV 196
GI G++ + + GV P+A S D++G D ++ V R V Q V
Sbjct: 191 GIVGYKATRGRYAMEGVYPLAASLDSLGPLCRSVQDAVWVDAVMRGLTAPTVTRQSLKGV 250
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQ 255
+V P ++F GL V + F G + G ++ +P+ +
Sbjct: 251 EIVIPRNIVF----------------DGLGSGVAEAFEGGVERLRSAGAHISPINIPAFE 294
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
L +L A A+ + + V+ D + R+ E +
Sbjct: 295 EIL------------ALMAKHGALVTAEAFALHRERLAGPEAVRMDHRVVLRTRLGE--K 340
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
TS + +T L A + L+G+ L P+V P + E+F A L
Sbjct: 341 TSMADYIAILAGRTRLIAEVDRLVGNR-FLAFPSVAHVAPPIATLQRDDELFFAANVKTL 399
Query: 376 SIAGVSGF---CQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ F C VSIP G + ++PV L A D LL + T ++
Sbjct: 400 RNTALGNFLDWCGVSIPCGKGEADMPVGFLLSAPANRDEALLAVSLTAEAVIR 452
>gi|312795425|ref|YP_004028347.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Burkholderia
rhizoxinica HKI 454]
gi|312167200|emb|CBW74203.1| Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)
[Burkholderia rhizoxinica HKI 454]
Length = 471
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 171/407 (42%), Gaps = 35/407 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ +IKD+FD+ G VT G+ + A T A V + GA IG+T M E
Sbjct: 86 PLMGVPVSIKDLFDIAGQVTRAGSVVLSDAPPARTD-ASTVARLQQAGAVIIGRTNMTEF 144
Query: 87 AYSINGENKHYGTPTNPC------APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
A+S G N HYGTP +P A R+ GGSSSG+A V + LGTDTGGSVR+
Sbjct: 145 AFSGLGLNPHYGTPASPWQRTADDAERRIAGGSSSGAAACVADGMAAVGLGTDTGGSVRI 204
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA+ CG+ GF+P+ + T GV+P++ S D+VG R+L L V R
Sbjct: 205 PAALCGLTGFKPTARRIPTDGVLPLSSSLDSVGPIGSSVACCALTDRILAGLPPVVPPAR 264
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P ++ V H++ + + + +LQH +
Sbjct: 265 P------------------------IEGVRLGALTHLMLDDMDLSVARAYDDALQHLSAA 300
Query: 261 GNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
G + E L L+ RL L E H + D P + R+ + SA
Sbjct: 301 GARVSELRFAPLERLAHINRLNLPSIESFAWHRKLIENRASDYDPRVLARIRKGEHASAA 360
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLLS 376
+ ++ A L +V PTVP PP+ LQ D + A S
Sbjct: 361 DYIELLRERADIIAQAEPLWHSFDAIVCPTVPIEPPRIAELQADDAVYARVNATILRNPS 420
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ C +S+P H PV + L + G D LL L + L
Sbjct: 421 LINYLDGCALSLPCSRHGEAPVGLMLASGTGRDTALLMLGRAVEAVL 467
>gi|268318045|ref|YP_003291764.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
DSM 4252]
gi|262335579|gb|ACY49376.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodothermus
marinus DSM 4252]
Length = 491
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 188/440 (42%), Gaps = 70/440 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL A+KD+ + G+ S +T + + GA IGKT DE
Sbjct: 68 PLGGLVLAVKDVICIKDQRVTCGSRMLENFVSLYDATV--ITRLREAGAIFIGKTNCDEF 125
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + E ++G NP PD VPGGSS GSAVAV A++ +LG+DTGGS+R PA++CG
Sbjct: 126 AMGSSNETSYFGPARNPINPDYVPGGSSGGSAVAVAARMCQAALGSDTGGSIRQPAAFCG 185
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P++ VS G++ A SFDT+G + R+ +V+ + + P +V
Sbjct: 186 IVGLKPTYGRVSRYGLVAYASSFDTIGPMTHTVEDAARILQVIAGVDRWDSTSAPVEVPD 245
Query: 207 AEDCLQLS------SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
+ L+ +P + T+GL ++ + G V++ SL H
Sbjct: 246 YLEALKQPIKGLRIGLPREYFTEGLDPEFRQVLEERAAQLEAAGAVVQEV--SLPH---- 299
Query: 261 GNKEQEYSIPS--LAALSSAMRLLQRY----------------EFKNNHGD-------WV 295
EY I + + A + A L RY E + D +V
Sbjct: 300 ----TEYGIATYYILATAEASSNLARYDGIRYGYRADVQQIRRELAESDSDDSVIYRLYV 355
Query: 296 TTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGI 344
+ G + R+ +EA AQ+ V+ +R +
Sbjct: 356 RSRSEGFGTEVKRRIMLGTYVLSAGYYEAYYAKAQR------VRRLIRQDFDRAFEQVDV 409
Query: 345 LVIPTVPGPPPKLQ---MDPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDN-LPVA 399
L+ P P PP L DP LE++ + +++ + +AG+ G +P+G H + PV
Sbjct: 410 LLTPASPTPPFPLGSKLSDP--LEMYLSDVYTVTANLAGIPGLV---VPVGTHSSGFPVG 464
Query: 400 ISLLAKHGSDGFLLNLVETL 419
LL +H + LL + L
Sbjct: 465 AQLLGRHFDEATLLRVGRAL 484
>gi|222081229|ref|YP_002540592.1| hypothetical protein Arad_7518 [Agrobacterium radiobacter K84]
gi|221725908|gb|ACM28997.1| amidase family protein [Agrobacterium radiobacter K84]
Length = 456
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 108/190 (56%), Gaps = 12/190 (6%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+F + G T G+ AR + A+ A V A+ G S+G+ M E A
Sbjct: 72 LDGIPIAWKDLFAIRGLPTTAGSTVLAR-EAPASEDADIVQALAEAGMVSVGRVNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGT NP + D RVPGGSSSGSAVAV A LV S+GTDTGGSVR+P+++
Sbjct: 131 FSGLGLNPHYGTSLNPLSKDVERVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------WDPKILNRVG--RVLLQLADDV 196
G+ G++ S S AGV P+A S D++G W + R+ +++ D+
Sbjct: 191 GLVGYKASRGRYSMAGVFPLATSLDSLGPLCRSVQDAIWVDAAMRRLTAPQIVRASLKDI 250
Query: 197 NLVRPSQVIF 206
+LV P ++
Sbjct: 251 SLVVPETIVM 260
>gi|388469706|ref|ZP_10143915.1| putative amidase IacH [Pseudomonas synxantha BG33R]
gi|388006403|gb|EIK67669.1| putative amidase IacH [Pseudomonas synxantha BG33R]
Length = 370
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 186/404 (46%), Gaps = 53/404 (13%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
SGL+ +KD D+ G T G+ +AA A V A+L+G +GKT + E+A+
Sbjct: 13 SGLSVMVKDTIDIAGFATRAGS-QALENAAAAQEHAQVVEALLAGNCRILGKTSLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
G N GT NP P +PGGSSSGSA AV A LVDF+LGTDTGGSVRVPA+ CG+F
Sbjct: 72 GTTGINHWSGTADNPLYPGLIPGGSSSGSAAAVAAGLVDFALGTDTGGSVRVPAACCGVF 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P+ +S AGV+P S D VG FA ++L +V + P A+
Sbjct: 132 GLKPTFGRISRAGVMPGVSSLDCVGPFAASMELLIAAMQV----------IDPG--FIAQ 179
Query: 209 DC---LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
C L + +P Q ++++++ G
Sbjct: 180 SCPPNLSIGVVPVTAHPQ-ILQTLDAALA------------------------RSGFALH 214
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID--- 322
+P + A +A + E N G + + LG I+ R+ A TS + +
Sbjct: 215 PTPLPGMEAAYNAGLAVINRETWNACGHLLPSGL--LGADIAARLQAAALTSDEALQQAE 272
Query: 323 -VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
VC++ E+ AAL+ H IL +PT+P P LQ+ +A L+ ++
Sbjct: 273 QVCEAFTHEVDAALA----QHPILALPTLPDYP--LQVAQAADTRAAIGMTHLVRPFNLT 326
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
G +S+PL LPV + L+A G D L + + L++
Sbjct: 327 GHPALSLPLQGPSGLPVGLQLIAGKGQDALLCAVALMISQRLEQ 370
>gi|453330023|dbj|GAC88001.1| amidase [Gluconobacter thailandicus NBRC 3255]
Length = 444
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 176/400 (44%), Gaps = 41/400 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F IKD+FDV G VT G+ A AT A V ++ GA + T MDE A
Sbjct: 71 LAGVPFGIKDLFDVAGQVTTAGSKVLA-NDPPATRDAALVARLIDAGAIPVALTNMDEFA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y +N H+G NP APD + GGSS GSA V A+L LG+DT GS+RVPAS CGI
Sbjct: 130 YGFATDNAHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPASLCGI 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R + + G P S DTVG F AD +R
Sbjct: 190 WGLRATQGRLPIEGSYPFVASLDTVGPF-----------------ADSAGGLRAC----F 228
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
E +Q + P D G +K V +L GG EN + + D V +L L Q
Sbjct: 229 EALVQTENAPVD---VGALK-VARL-GGWFAEN--MSAPMADAVSALGARL---GATQTV 278
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+P +A ++ ++ E H + T D P + +R+ A I +
Sbjct: 279 ELPEVARARASAFVISASEGAALHLHRLRTQAQDYDPAVRDRLLAGALLPASLIFQAHRL 338
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV------FRARAFSLLSIAGVS 381
+ RA + D IL+ P V G P+ D +EV RA ++
Sbjct: 339 RNWFRARMHEAFADADILLAPAVVGEAPRF--DQPLIEVGGKMVSARANLGLYTQPLTLA 396
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
GF +++P+ LP+ L+A+ G + LL L E+L
Sbjct: 397 GFPVLTVPMKTA-GLPLGAQLIARPGREDLLLALGESLER 435
>gi|190895565|ref|YP_001985857.1| hypothetical protein RHECIAT_PA0000250 [Rhizobium etli CIAT 652]
gi|190699510|gb|ACE93594.1| probable glutamyl-tRNA amidotransferase protein, A subunit
[Rhizobium etli CIAT 652]
Length = 456
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 177/396 (44%), Gaps = 44/396 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L G+ A KD+FD++G T G+ A A AV+A+L + G +IG+T M E
Sbjct: 72 LDGIPIAWKDLFDIEGVTTTAGSRVLA--GDAPAERDAAVVALLKNAGMIAIGRTNMSEF 129
Query: 87 AYSINGENKHYGTPTNPCAPDR--VPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP DR +PGGSSSG+ VAV A LV ++GTDTGGSVRVPA++
Sbjct: 130 AFSGLGINPHYGTPVNPQNSDRPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRVPAAF 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
GI G++ + + GV P+A+S D++G K + + L RP Q
Sbjct: 190 NGIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRTVKDAVWIDAAMRGLTAPEVAERPLQG 249
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ + L +I D G+V + E +L+ G +
Sbjct: 250 L---ELLVPENIVFDGAEPGVVAAFEA---------------------ALERLQRAGVRM 285
Query: 265 QEYSIPSLAALSSAMRLLQRY------EFKNNHGDWVTTVKPD-LGPGISERVWEAVRTS 317
+IP A +RLL +Y + H + ++ + D + + R RT+
Sbjct: 286 SRITIP---AFDEIIRLLTKYGPLVTAQAYALHQERLSGPEADRMDHRVVMRTRLGARTT 342
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + L A + +GD ++ PTV P + E+F A L
Sbjct: 343 APHYMALLEARGRLIADVDRFIGDR-LIAFPTVAHVAPPIAPLEQDDELFFATNNKTLRN 401
Query: 378 AGVSGF---CQVSIPLGLHD-NLPVAISLLAKHGSD 409
F C VSIP G+ + +PV + L A D
Sbjct: 402 TMFGNFLDWCGVSIPCGMGEAGMPVGLLLSATARRD 437
>gi|313677418|ref|YP_004055414.1| aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a
[Marivirga tractuosa DSM 4126]
gi|312944116|gb|ADR23306.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Marivirga tractuosa DSM 4126]
Length = 474
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 177/409 (43%), Gaps = 55/409 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL IKD+ H + S T TA V +L A IG DE A
Sbjct: 69 LFGLVIGIKDVLVHQNHEVRSASEILKGFESQFTGTA--VQRLLDEDAIIIGAQNCDEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ EN +G N RVPGGSS SAVAV A L SLGTDTGGSVR PA++CG+
Sbjct: 127 MGSSNENSAFGPTLNAADHSRVPGGSSGASAVAVQAGLCMASLGTDTGGSVRQPAAFCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++S VS G+I A SFD +G F+ + + R+ V+ + + V +V
Sbjct: 187 VGIKPTYSRVSRYGLIAFASSFDCIGIFSNNIEDNARILEVIAGYDEYDSTVSTEEV--- 243
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLSEGNKEQE 266
P + K ++ + IEN L +K+ + L+ EG++ +E
Sbjct: 244 ---------PDYASNLHINKKLKIAYVKETIENEALNSEIKEATISKLEWLKKEGHQVEE 294
Query: 267 YSIPSLAALSSAMRLLQ--------------RYEFK-----NNHGDWVTTVKPDLGPGIS 307
+ P L + +L RY ++ N + + G +
Sbjct: 295 VTFPHLDYVLPTYYILTTAEASTNLSRFDGVRYGYRAPEAHNMESMYKLSRSQGFGEEVK 354
Query: 308 ERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
R+ ++A T AQK V+ +R +L ++ +++PT P +
Sbjct: 355 RRIMLGTFVLSASYFDAYYTKAQK------VRRIIRDETREMLSEYDFIIMPTTPTTAFQ 408
Query: 357 LQMD-PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLL 403
L + + E++ F++ A VSG +SIP G+ NLP+ + ++
Sbjct: 409 LGTNRDNPAEMYLEDIFTVQ--ANVSGIPAISIPNGVDAQNLPIGLQIM 455
>gi|254563032|ref|YP_003070127.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
gi|254270310|emb|CAX26306.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium
extorquens DM4]
Length = 611
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 181/412 (43%), Gaps = 31/412 (7%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L P A++ PL G+ FA+KD DV G T PD+A T A TAPA +L+ GA
Sbjct: 58 LGPFDPANK-PLWGVPFAVKDNVDVAGLPTTAACPDFAYTPQA---TAPAAERLLAAGAI 113
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+GKT +D+ A + G Y P N P VPGGSSSGSAVAV LV F+LGTDT G
Sbjct: 114 LVGKTNLDQFATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAG 173
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S RVPA I G +PS +VS GV+P ++ DT+ FA + V RV+
Sbjct: 174 SGRVPAGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSIFAGTVAEADAVFRVMAGYDPQD 233
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
R V L P RV G+ + +F G + + D
Sbjct: 234 PYSRALPVPPRPGALP----PGLRV--GVPDAAGLIFAGDALSAAAFDGALADLHTVTGA 287
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVR 315
+ + +++ L L + + +RY+ +P+ L P + A
Sbjct: 288 AATAVDLAPFFAVAGL--LYAGPWVAERYQAIRGF----MEERPEALHPTTRAIIGAATG 341
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDP----SALEVFRA 369
SA ELR A A+ +LV+PT P P L DP S L +
Sbjct: 342 HSAADAFAGLYRLAELRRATEAVWRGIDVLVVPTYPRPRRVADLAADPVGPNSELGTY-T 400
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
+LL + C +++P D LP ++L+A G+DG + L LH
Sbjct: 401 NFVNLLDL------CALAVPGRFRADGLPSGVTLIAPRGADGLIAELGARLH 446
>gi|188583116|ref|YP_001926561.1| allophanate hydrolase [Methylobacterium populi BJ001]
gi|179346614|gb|ACB82026.1| allophanate hydrolase [Methylobacterium populi BJ001]
Length = 603
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 182/409 (44%), Gaps = 44/409 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G T PD+A T A +APAV +L+ GA +GKT +D+
Sbjct: 67 PLWGVPFAVKDNVDVAGLPTTAACPDFAFTPQA---SAPAVERLLAAGALLVGKTNLDQF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G Y P N P VPGGSSSGSAVAV LV FSLGTDT GS RVPA
Sbjct: 124 ATGLVGVRTPYPVPRNAIDPAVVPGGSSSGSAVAVARGLVGFSLGTDTAGSGRVPAGLNN 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +PS +VS+ GV+P ++ DT+ FA + V R++ + R +
Sbjct: 184 IVGLKPSLGSVSSRGVVPACRTLDTLSVFAGTVAEADAVYRIMAGYDAEDPYSRSLPLPP 243
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
L P RV G+ + ++FGG + D LQ + E
Sbjct: 244 RPGALP----PGLRV--GVPDAAGRIFGGDPQSETAFDASLAD----LQTVIG-----GE 288
Query: 267 YSIPSLAALSSAMRLL-------QRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTSA 318
+ LA + +LL +RY+ +PD L P + A SA
Sbjct: 289 ATAIDLAPFFAVAQLLYAGPWVAERYQAIRGF----IEARPDSLHPTTRAIIGAATAHSA 344
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDP----SALEVFRARAF 372
ELR A A+ +LV+PT P P +L DP S L +
Sbjct: 345 ADAFAGLYRLAELRRATEAVWHGIDVLVVPTYPRPRRVDELAADPIGPNSELGTY-TNFV 403
Query: 373 SLLSIAGVSGFCQVSIP-LGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
+LL + C +++P D P ++L+A G+DG + L LH
Sbjct: 404 NLLDL------CALAVPGRPRADGFPSGVTLIAPRGADGLIAELGARLH 446
>gi|390991028|ref|ZP_10261303.1| amidohydrolase, AtzE family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372554288|emb|CCF68278.1| amidohydrolase, AtzE family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 486
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 167/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R H A S AV+ L GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCAPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H AV GV P + D VG FA L V
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCV--------------------- 264
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +PS + V + F ++ ++ G LQ L+ N
Sbjct: 265 -YDVLRGQPLPSCHAGKLRVARLGGWFQRNLDPDLEAG---------LQALLAACNSLAS 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 315 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 375 FAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|302403847|ref|XP_002999762.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium
albo-atrum VaMs.102]
gi|261361518|gb|EEY23946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium
albo-atrum VaMs.102]
Length = 720
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 192/438 (43%), Gaps = 45/438 (10%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
A EK+ +P PL G+ F +KD DV+G T P +A A TA V
Sbjct: 307 ALAEKYKEKPLP-----PLFGVPFGVKDSIDVEGIETTAACPSYAYVPKA---TATCVQH 358
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L G +GKT +D++A ++G YG P + + D + GGSSSG VAV A+LV F+
Sbjct: 359 ILDAGGIYVGKTNLDQLATGLSGCRSPYGVPHSIFSKDLIAGGSSSGGCVAVAARLVPFT 418
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+ TDT GS RVPA++ G+ GF+P+ +S G+IP ++ D++ A V RV+
Sbjct: 419 VATDTAGSGRVPAAFNGVVGFKPTKGTISARGLIPACKTLDSIAIVATSVADARAVWRVI 478
Query: 190 LQ--LADDVNLVRPSQVIFAEDCLQLS------SIPSDRVTQGLVKSVEKLFGGHIIENV 241
+ AD + + + + D L ++P + +LF + +
Sbjct: 479 AKHDKADPYSKLPHTLPTWKTDFRGLKDGGFDFAVPPPAALEACTPEYRRLFAEAVKKLQ 538
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
G +++ + F G E ++ L + + R +++ D
Sbjct: 539 SAGGRLRNT--DWEAFERAGELLYEGAL-----LHERITCIGREFLRSSIQDG------G 585
Query: 302 LGPGISERVWEAVRTSAQKIDVC--QSVKTEL----RAALSALLGDHGILVIPTVPGPP- 354
L P I + +A+ + DV Q+ + EL A L G +LV+PT P
Sbjct: 586 LHPVIQKLFSDALNKAPDAYDVFRDQATQAELSRRTHMAFDTLSGGVDVLVVPTTVCHPT 645
Query: 355 -PKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-----DNLPVAISLLAKHGS 408
++ DP L AR + A + C +S+P G + LP +++LA G
Sbjct: 646 FEEIAADPIRLN---ARLGTFTHFANIVDLCGLSVPAGTYLDEKETELPFGVTILAGSGF 702
Query: 409 DGFLLNLVETLHNTLKEE 426
D L++ L +K +
Sbjct: 703 DAKALDVARVLEEVIKAK 720
>gi|398824890|ref|ZP_10583207.1| allophanate hydrolase [Bradyrhizobium sp. YR681]
gi|398224470|gb|EJN10775.1| allophanate hydrolase [Bradyrhizobium sp. YR681]
Length = 605
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 183/424 (43%), Gaps = 27/424 (6%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+ D A EK + ++S LPL G+ A+KD D G T P +A T T +
Sbjct: 53 EKDAMAEAEKLAAKDAAS---LPLYGVPVAVKDNIDALGFPTTAACPAFAYTP---THDS 106
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
AV + + GA IGKT +D+ A + G YG P N D +PGGSSSGSA AVGA
Sbjct: 107 TAVERLRAAGAIIIGKTNLDQFATGLVGVRSPYGIPRNSIRDDLIPGGSSSGSATAVGAG 166
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW--DPKIL 182
LV SLGTDT GS RVPA I G +PS +STAG++P ++ D + FA D L
Sbjct: 167 LVPLSLGTDTAGSGRVPAMLNNIVGLKPSLGMISTAGLVPACRTLDCISVFALTVDDAAL 226
Query: 183 NRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
AD + RP I + P++ + G+ ++ + +F G
Sbjct: 227 ALSVMAGPDQADPFSRDRPLGAI--------TPFPTN-LRLGVPRNGQLIFFGDKKSEAA 277
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD- 301
D +K + +L L E + E Y L L + +RY N + PD
Sbjct: 278 YADALK-RWTALGATLVEFDLEPFYETARL--LYEGPWVAERYLVIKN----LLASAPDT 330
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
+ P E R +A LR + LV+PT P Q+
Sbjct: 331 IHPVTREITAAGARLTAADTFSALYRLQGLRKIAERTFANIDALVLPTAPTAYTTAQVLA 390
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
+ +E +R + + + C +++P + D +P I+LLA G D L ++ H
Sbjct: 391 NPVE-LNSRLGTYTNFVNLLDLCGLAVPAAMRADGIPFGITLLAPAGRDAMLASIGRAFH 449
Query: 421 NTLK 424
K
Sbjct: 450 ADTK 453
>gi|330835108|ref|YP_004409836.1| amidase [Metallosphaera cuprina Ar-4]
gi|329567247|gb|AEB95352.1| amidase [Metallosphaera cuprina Ar-4]
Length = 388
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 185/418 (44%), Gaps = 48/418 (11%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+S Y AF+ F PL+GLTF +KD+ + +G T G+ ++ A
Sbjct: 9 NSVYNAFITTF----EKKGGDGPLAGLTFGVKDVIETEGIKTTAGSR--ILRNNVPKRDA 62
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V A+LS G T +GKT E A + G NP +R+ GGSS GSAVAV
Sbjct: 63 WIVKAILSAGGTILGKTNTHEFAIGATNTSSLVGPARNPRDKERISGGSSGGSAVAVALN 122
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+VD +GTDTGGS+R+PAS CG+ G++PS+ T GVIP + S DT+G+ D + L
Sbjct: 123 MVDVGVGTDTGGSIRIPASLCGVIGYKPSYGVFPTEGVIPFSWSLDTIGFLTRDLETLWM 182
Query: 185 VGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
+ +L P+ +V K F ++ + +G
Sbjct: 183 TIKGIL--------------------------PASKV---------KYFLQYVRSSPRVG 207
Query: 245 DYVKDKVPS--LQHFLSEGNKEQEYSIPSLAALSSAM-RLLQRYEFKNNHGDWVTTVKPD 301
++ D+ L+ L +E ++ + S + R++ E + H W+ T++
Sbjct: 208 LFMFDETTKDVLEKVLEFFPNSKEVNLRLMTKYGSQVRRIIAGSEGASYHTTWLKTMRDM 267
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTE--LRAALSALLGDHGILVIPTVPGPPPKLQM 359
P + + + +TSA +D S++ + D +++ PT PK+
Sbjct: 268 YFPDVLKVLDSGQKTSA--VDYINSLRMRKLILEEYVRTFNDFDVIISPTTKITAPKISE 325
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
FR S+ + + G +S+P+ LP+ I + K SDG +L L +
Sbjct: 326 VLGKEAEFRDGLVSITELFNLVGAPSISVPIMERQGLPIGIMISGKPFSDGVVLGLAK 383
>gi|374636672|ref|ZP_09708229.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanotorris
formicicus Mc-S-70]
gi|373558227|gb|EHP84581.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanotorris
formicicus Mc-S-70]
Length = 432
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 196/435 (45%), Gaps = 67/435 (15%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + PL G AIK +V G+ + + A A + + + GA
Sbjct: 37 LEKNEKLKDKPLYGKIIAIKANINVKGYTISCASKTLE--NYIAPYDATVIKKLKANGAL 94
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG T +DE A +GE ++G NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 95 IIGMTNLDEFACGSSGETSYFGATKNPKAEDRIPGGSSSGSAAAVSADLCDMALGSDTGG 154
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G +
Sbjct: 155 SIRNPASHCGVVGFKPSYGVVSRQGLCDLAMSFDQIGPITKN------------------ 196
Query: 197 NLVRPSQVIFAEDCLQLSSI-----PSDRVTQGLVK----SVEKLFGGHIIENV-ILGDY 246
AED L L++I PSD T K SVE G + E + + D
Sbjct: 197 ----------AEDALLLTNIIKGKDPSDSTTVETPKFEKESVENYKVGVVKEFMDVADDK 246
Query: 247 VKDKVPS-LQHFLSEGNKEQE------------YSIPSLAALSSAMRLL--QRYEFKNNH 291
++DK+ ++ F G + E Y + + SA R +RY ++
Sbjct: 247 IRDKIEKGIEVFKDLGCEIVELSYKYVDLALPTYYLINYVEFFSATRKYDGRRYGYRIEE 306
Query: 292 --GDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
G+ V + +G ISE+ + S + + +R + +L D ++V PT
Sbjct: 307 VCGEEVLR-RILIGKHISEKEY-----SGKYYKRALQARNVMRKEMMKILKDVDVIVGPT 360
Query: 350 VPGPPPKLQMDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGS 408
VP P KL S +E++ A+ +L++ + G C +P G + +PV + + AK
Sbjct: 361 VPKLPHKLGEKLSPMEMY---AYDVLTVPTNICGICAGVVPCGDVNGVPVGLQIQAKSFE 417
Query: 409 DGFLLNLVETLHNTL 423
D +L+ + L
Sbjct: 418 DQKVLSAMIEFEKAL 432
>gi|325914412|ref|ZP_08176759.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937]
gi|325539420|gb|EGD11069.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937]
Length = 486
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 172/398 (43%), Gaps = 36/398 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F +KD+FDV G VT G A+ + AT A V + GA +G MDE A
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAAIRAQC-APATRDAAVVQRLCDAGAVLVGTANMDEFA 166
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG+
Sbjct: 167 YGFATVNAHYGTTANPHDHRHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGV 226
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G RP+H A+ GV P + D VG FA + RV V+ A
Sbjct: 227 YGLRPTHGALPLEGVFPFVDALDVVGPFATSVADVRRVYEVMHGHA-------------- 272
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++ + R+ + GG N+ D D + L+ +
Sbjct: 273 ---LHSCNVANLRIAR---------LGGWFQRNL---DPELDA--GIGALLAACHSTTLI 315
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+P +A +L E + H + T P +R+ ++ A + +
Sbjct: 316 ELPQAERARAAAFVLTAAEGGHRHRAALGTHGDQFDPATRDRLLAGLQLPASAVADARRF 375
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSGF 383
RAA+ L D +L+ P P P++ D ++ A + L I G++G
Sbjct: 376 AQWFRAAMQQLWDDVDVLIAPATPCVAPRIDQDTIVIDGLPVSARANLGIFTQPLGLAGC 435
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 436 PVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAHLER 473
>gi|294667814|ref|ZP_06733024.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
gi|292602440|gb|EFF45881.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
Length = 469
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 166/393 (42%), Gaps = 38/393 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R H S AV+ L GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAA--VRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H AV GV P + D VG FA L RV
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRRV--------------------- 264
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +P+ + V + F ++ ++ G LQ L+ N
Sbjct: 265 -YDVLRGQPLPACHAGKLRVARLGGWFERNLDPDLEAG---------LQALLAACNSLSS 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 315 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 375 FAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDDLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
++ PL LP+ + L+A G + L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFAL 467
>gi|320537000|ref|ZP_08036981.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Treponema phagedenis F0421]
gi|320146150|gb|EFW37785.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Treponema phagedenis F0421]
Length = 485
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 182/430 (42%), Gaps = 47/430 (10%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
S A PL GL FA+KD + G + A A + +L+ GA IG
Sbjct: 66 SGGAADKPLLGLPFAVKDNISIKGEACTCCSK--ILQGYTAPFNATVIERLLAAGAIPIG 123
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
+T MDE A + E YG NP R GGSS GSA V SLGT+TGGSVR
Sbjct: 124 RTNMDEFAMGSSTEYSIYGPSRNPIDRSRTTGGSSGGSAAVVAGSQAPLSLGTETGGSVR 183
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL-LQLADDVNL 198
+PASYCG++G +P++ +S GV+ S D VG FA K + + L + + D
Sbjct: 184 LPASYCGLYGLKPTYGTLSRYGVVAFGSSLDQVGLFA---KSADDIALALSVMVGKDARD 240
Query: 199 VRPSQVIFAEDCLQLSSIP--SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
+ + FA LSSI S + + ++ K F I + + D K V
Sbjct: 241 ETSADIDFA----GLSSIQPFSKEELKNIKVALPKEF---IHQKALAADVSKAMVDFFDW 293
Query: 257 FLSEGNKEQEYSIPSL-------------AALSSAMRLLQ-RYEFKNNHGD-----WVTT 297
G + QE +P L A S+ MR RY + + G ++ T
Sbjct: 294 LRMSGVQTQEIDLPVLDAAVPVYYVIAVSEAASNLMRFDGIRYGLREDPGKGYDELYIAT 353
Query: 298 VKPDLGPGISERVWEAVRT-----SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
GP + R+ S + V+ + S L + + PT P
Sbjct: 354 RSDGFGPEVKRRIITGNYVLSHHFSGDCYEKSLHVRARIERETSETLRHYDFICSPTAPT 413
Query: 353 PPPKLQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGS 408
P KL DP + ++ + F+ + ++ VS+P G+ +N LP+ + ++ KH
Sbjct: 414 PAFKLGEKINDP--VTMYLSDLFT--TFVNLARVPSVSVPSGMTENGLPIGMQIVGKHFD 469
Query: 409 DGFLLNLVET 418
+ +L L +T
Sbjct: 470 EKNILRLAKT 479
>gi|430746988|ref|YP_007206117.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Singulisphaera acidiphila DSM 18658]
gi|430018708|gb|AGA30422.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 87/152 (57%), Gaps = 2/152 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL AIKD+ V+G T G+ +T A L S GA GKT MDE
Sbjct: 69 PLGGLPVAIKDVLCVNGEPTTCGSRMLENFRPPYDATVIARLK--SAGAILFGKTNMDEF 126
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN YG NP +R+PGGSS GSAVA+ A L SLGTDTGGS+R PA+ CG
Sbjct: 127 AMGSSTENSAYGPTRNPWDEERIPGGSSGGSAVAIAADLAPLSLGTDTGGSIRQPAALCG 186
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWD 178
+ G +P++ VS G+I A S D VG FA D
Sbjct: 187 VVGLKPTYGRVSRYGLIAYASSLDQVGPFAHD 218
>gi|418520101|ref|ZP_13086151.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410704055|gb|EKQ62540.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
Length = 486
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 167/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R H S AV+ L GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H AV GV P + D VG FA L V
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCV--------------------- 264
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +PS ++ V + F ++ ++ G LQ L+ N
Sbjct: 265 -YDVLRGQPLPSCHASKLRVARLGGWFQRNLDPDLEAG---------LQALLAACNSLAS 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 315 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 375 FAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|226322860|ref|ZP_03798378.1| hypothetical protein COPCOM_00632 [Coprococcus comes ATCC 27758]
gi|225208646|gb|EEG91000.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Coprococcus comes ATCC 27758]
Length = 496
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 185/419 (44%), Gaps = 73/419 (17%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ AIKD +G T + ++ T +A AVL + GA IGKT MDE
Sbjct: 70 PLAGVPVAIKDNMCTEGVTTTCSSK--ILSNFVPTFSAEAVLNLEKAGAVVIGKTNMDEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E +YG NP + VPGGSS GS AV V ++LG+DTGGS+R P+SYCG
Sbjct: 128 AMGSTTETSYYGETKNPWNLEHVPGGSSGGSCAAVATLEVPYALGSDTGGSIRQPSSYCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P++ VS G+I S D +G A D + VL +A + V+ S +
Sbjct: 188 IVGIKPTYGTVSRYGLIAYGSSLDQIGPVARD---VTDCATVLETIAS--HDVKDSTSVE 242
Query: 207 AEDCLQLSS-----------IPSDRVTQGLVKSVEKLF---------GGHIIENVILGDY 246
+D S+ IP D +GL + V+K G IE LG
Sbjct: 243 RQDTDFTSALVNDVKGMKIGIPKDYFGEGLDEEVKKPILEAAEVLKNAGAEIEEFDLG-L 301
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRL------LQRYEFKNNHGDWVTTVKP 300
VK +P+ Y I S A S+ R + +++ H + T
Sbjct: 302 VKYAIPAY------------YVIASAEASSNLSRFDGVKYGYRTKDYEELHQMYKKTRSE 349
Query: 301 DLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
GP + R+ ++A A + K ++ A + + +++ P
Sbjct: 350 GFGPEVKRRIMLGSFVLSSGYYDAYYLKALR------TKALIKKAFDSAFAKYDMILAPA 403
Query: 350 VPGPPPKLQM---DPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLH-DNLPVAISLL 403
P PKL DP ++++ +++ +++AG+ G +SIP+G LPV + L+
Sbjct: 404 APTTAPKLGASLSDP--IKMYLGDIYTISVNLAGLPG---ISIPVGRDAKGLPVGMQLI 457
>gi|121604659|ref|YP_981988.1| amidase [Polaromonas naphthalenivorans CJ2]
gi|120593628|gb|ABM37067.1| Amidase [Polaromonas naphthalenivorans CJ2]
Length = 450
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 193/436 (44%), Gaps = 54/436 (12%)
Query: 1 MASRDSDYGAFME-------KFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDW 53
+AS D+ AFM L+ +S+ L+G+ ++KD+FDV G VT G+
Sbjct: 36 IASSDACRHAFMPGQPKSAPALPLKAASNDPAFALTGIPVSVKDLFDVAGQVTTAGSTVL 95
Query: 54 ARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPC--APDRVPG 111
A A+T AV + + GA +G++ M E A+S G N HYGTP NP + +R+PG
Sbjct: 96 AGAAPASTDAV-AVARLRAAGAVLVGRSNMVEFAFSGVGINPHYGTPVNPADASIERIPG 154
Query: 112 GSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDT 171
GSSSG+AV+V LG+DTGGS+R+PA+ CGI GF+ + V G +P++ S DT
Sbjct: 155 GSSSGAAVSVATGAALVGLGSDTGGSIRIPAALCGIVGFKSTARLVPATGAVPLSTSLDT 214
Query: 172 VGWFAWDPKILNRVGRVL----LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVK 227
V V VL +QLA + ++ A +Q GL
Sbjct: 215 VCAVTRSVHDAVTVHEVLSARRVQLAG--KPLSSCRIAVARTLMQ----------DGLDS 262
Query: 228 SVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSS--AMRLLQRY 285
+V + F E+ SL+ G + +E ++ + LS+ A L
Sbjct: 263 TVAQAF-----EH------------SLRVLRQAGARIEEIALEEIGELSAINASGGLSAA 305
Query: 286 EFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
E H + + P ++ R+ R SA + + + + A L +
Sbjct: 306 ESHAWHRKLIAEHEAQYDPRVALRILRGARMSAADYIDLLAARQNWISRMEARLSHFDAV 365
Query: 346 VIPTVPGPPPKLQMDPSAL----EVFRARAFSL--LSIAGVSGFCQVSIPLGLHDNLPVA 399
+ PTVP P + S L E FR A L S+A + C +SIP LPV
Sbjct: 366 LSPTVPIVAPSIA---SVLDHDDEFFRINALLLRNTSVANMLDGCAISIPCQTPGQLPVG 422
Query: 400 ISLLAKHGSDGFLLNL 415
+ L D +L+L
Sbjct: 423 LMLWHAALHDDNVLDL 438
>gi|330505114|ref|YP_004381983.1| amidase [Pseudomonas mendocina NK-01]
gi|328919400|gb|AEB60231.1| amidase [Pseudomonas mendocina NK-01]
Length = 373
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 177/404 (43%), Gaps = 65/404 (16%)
Query: 35 IKDIFDVDGHVTGFGNPDWARTHSAATSTAP-------AVLAVLSGGATSIGKTIMDEMA 87
+KD DV GH T R S A AP V A+L G +GKT + E+A
Sbjct: 22 VKDTIDVAGHPT--------RASSRALEHAPDAERHADVVQAMLDAGCQLLGKTSLHELA 73
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ G N GT NP P R+PGGSSSGSA AV A L DFSLGTDTGGSVR+PA+ CG+
Sbjct: 74 FGTTGLNAWIGTAENPRYPGRIPGGSSSGSAAAVAAGLCDFSLGTDTGGSVRIPAACCGV 133
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG +PS VS AGV+P S D VG FA AD L+ QVI
Sbjct: 134 FGLKPSFGRVSRAGVMPTQTSLDCVGPFA----------------ADIDTLITAMQVID- 176
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS---EGNKE 264
PS +V G + + +G P +Q + E +
Sbjct: 177 ---------PSFKVLPG-------------VNGIRIGVVPVQAHPEVQAVVDAVLEASAF 214
Query: 265 QEYSIP---SLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+ Y P AA + + ++ R E N G V + +G ++ R+ A T + +
Sbjct: 215 ELYEAPLPGMPAAYDAGLAVINR-ETWNACGHLVDSGL--VGADVAGRLLAARDTRDEAL 271
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ + A + A L + IL +PT+P P + AF + ++
Sbjct: 272 ADAERCRAAFTAEVDAALAQYPILALPTMPDYPALVADAADTRAAIGMTAF--VRPFNLT 329
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
G +SIP LPV + L+A G+D LL + L L++
Sbjct: 330 GHPALSIPFEGASKLPVGLQLVAAKGADELLLAVARELLQRLEQ 373
>gi|73541082|ref|YP_295602.1| amidase [Ralstonia eutropha JMP134]
gi|72118495|gb|AAZ60758.1| Amidase [Ralstonia eutropha JMP134]
Length = 451
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA--ATSTAPAVLAVLSGGATSIGKTIMD 84
PL+GL ++KD+FDV G VT + A H A AT+ A V + GA +G+T M
Sbjct: 66 PLAGLPVSVKDLFDVAGEVTRAAS---AVRHDAPPATADATVVARLRHAGAALVGRTNMT 122
Query: 85 EMAYSINGENKHYGTPTNPCAPD---RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
E A+S G N H+GTP NP + D R+PGGSSSG+AV+V L +LG+DTGGS+R+P
Sbjct: 123 EFAFSGVGINPHFGTPVNPASADGIARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIP 182
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
A+ CG+ GF+P+ V G P++ + DT A
Sbjct: 183 AALCGLTGFKPTTRRVPLTGAFPLSYTLDTACAMA 217
>gi|422651429|ref|ZP_16714224.1| hypothetical protein PSYAC_07615 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964507|gb|EGH64767.1| hypothetical protein PSYAC_07615 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 457
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 181/412 (43%), Gaps = 40/412 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+R+PA++
Sbjct: 131 AYSGLGLNPHFGTPINPKSDSSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ GFR + S GV P+A + D+VG VR + V
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDALV 230
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I +D L S P+ + + L L ++E+ + V+D + L G
Sbjct: 231 I--DDLLCARSKPTSLLPRSLAGQ-RFLVDRAVLEDERVAPAVRDNLLRAVEALQAGGAL 287
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E A + ++++Q++ F + + L P + +R+ A
Sbjct: 288 IEMG--HCQAFQATLQVIQQHGWLGAAEAFALHQPLLDSDAASQLDPRVRKRLEAARHMP 345
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + + L+ L+ L D +L+ P+V P L + E+F + L +
Sbjct: 346 ASLLVNLYAARERLQEQLTLEL-DGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRL 404
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
VS+P G LP + L A G D LL T+ + L +
Sbjct: 405 TMPGSLLNMPGVSLPSGCDAAGLPTGLLLSAPAGEDARLLRAALTVESLLNQ 456
>gi|422340400|ref|ZP_16421341.1| hypothetical protein HMPREF9353_00002 [Treponema denticola F0402]
gi|449106524|ref|ZP_21743189.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ASLM]
gi|451968232|ref|ZP_21921461.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
US-Trep]
gi|325475574|gb|EGC78750.1| hypothetical protein HMPREF9353_00002 [Treponema denticola F0402]
gi|448964878|gb|EMB45545.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ASLM]
gi|451703189|gb|EMD57571.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
US-Trep]
Length = 485
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 189/425 (44%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + ++ +T + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYYAPYNATV--IDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP +R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRERTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F + + +G ++ D+ +
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEAADI-ALGLAVMAGKDEKD--ET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKIAIPKEF----LNTQGLDPEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDAGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|372269524|ref|ZP_09505572.1| hypothetical protein MstaS_00544 [Marinobacterium stanieri S30]
Length = 453
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 4/152 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A KD+FD+ VT G+ + T AT A AV + G SIGKT M E+
Sbjct: 71 PLDGVPIAWKDLFDLASMVTTAGSKILSST--PATKDARAVYNASAAGLVSIGKTNMTEL 128
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP + + D RVPGGSSSGSA+AV +V ++GTDT GS+RVPA++
Sbjct: 129 AYSGLGLNPHFGTPLSIASGDKARVPGGSSSGSALAVAQGIVPAAIGTDTAGSLRVPAAF 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G+ +RPS + S GV P+A++ DT+G A
Sbjct: 189 NGLTSYRPSQARHSREGVTPLAKTLDTIGVIA 220
>gi|449126680|ref|ZP_21762960.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
SP33]
gi|448946277|gb|EMB27141.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
SP33]
Length = 485
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 190/436 (43%), Gaps = 65/436 (14%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + + A A + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYY--APYNATVIDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP +R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRERTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL----------Q 191
ASYCGI+G +P++ S GV+ + S D VG F + + +G ++ +
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEAADI-ALGLAVMAGKDEKDETSE 244
Query: 192 LADDVNLVRPSQVIFAEDCLQLSSIPSDRV-TQGLVKSVEKLFGGHIIENVILGDYVKDK 250
AD +L++ S E +IP + + TQGL V+K+F
Sbjct: 245 EADFSSLLKLSAYSKEEIASLKIAIPKEFLNTQGLDPEVKKVFD---------------- 288
Query: 251 VPSLQHFLSE-GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNN 290
L +L++ G K +E SIP L A+S A L R + K N
Sbjct: 289 --ELCAWLTKNGAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDTGKGN 346
Query: 291 HGDWVTTVKPDLGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
++ T GP + R+ + S + +V+ ++ ++ +L + +
Sbjct: 347 DELYIQTRSEGFGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFI 406
Query: 346 VIPTVPGPPPKLQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAIS 401
+ PT P P KL DP A+ + + F+ + ++ +S+P G LPV I
Sbjct: 407 ICPTAPAPAFKLNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQ 462
Query: 402 LLAKHGSDGFLLNLVE 417
K S+ +L L +
Sbjct: 463 FCGKKFSEDRILKLAK 478
>gi|398808504|ref|ZP_10567367.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
gi|398087536|gb|EJL78122.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
Length = 463
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 169/404 (41%), Gaps = 62/404 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD++DV G T G+ A + A A AV + + GA +GKT M E
Sbjct: 70 PLAGLPVSVKDLYDVAGETTMAGSAVCA-GEAPAAHDATAVARLRAQGAAIVGKTNMTEF 128
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP R+PGGSSSG+AV+V L LG+DTGGS+R+PA+
Sbjct: 129 AFSGVGINPHYGTPRNPADAQTPRIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAAL 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+ + S V G +A+S DTV A
Sbjct: 189 CGLVGFKSTQSRVPRTGAFELARSLDTVCAMARS-------------------------- 222
Query: 205 IFAEDCLQLSSIPS-------DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
EDCL + + R QG+ +V + IE + + + +LQ
Sbjct: 223 --VEDCLIADAAIADAPLAVRRRPLQGMRLAVPRTLMFDDIEPAVARAFDR----ALQAL 276
Query: 258 LSEGNKEQEYSIPSLAALSSA----------MRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
+ G + + ++ LA +++ + R F + + V + G
Sbjct: 277 SAAGAQIVDITLAELAEIATVNAPGGFSPVEASAVHRERFAAKRSGFDSRVAARIALGTE 336
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
R + + ++ D V+ + LV PTVP P + F
Sbjct: 337 VRAADYIAMQDRRRDWIGRVERAIEG--------FDALVCPTVPIVAPPIDALAEDAAFF 388
Query: 368 RARAFSLLSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSD 409
+A L + ++ C S+P LPV + L + HG D
Sbjct: 389 KANGLLLRNTFAINLLDGCAFSLPCHAPGELPVGLMLASVHGDD 432
>gi|316935363|ref|YP_004110345.1| allophanate hydrolase [Rhodopseudomonas palustris DX-1]
gi|315603077|gb|ADU45612.1| allophanate hydrolase [Rhodopseudomonas palustris DX-1]
Length = 601
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 178/407 (43%), Gaps = 40/407 (9%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ A+KD DV G T P ++ + A AV + + GA IGKT +D+
Sbjct: 64 LPLYGVPVAVKDNIDVAGLPTTAACPAFSYQPA---CDATAVAKLRAAGAIVIGKTNLDQ 120
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG P N D VPGGSSSGSAVAVGA LV SLGTDT GS RVPA
Sbjct: 121 FATGLVGVRSPYGVPRNAIRSDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLN 180
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
I G +PS +STAGV+P ++ D V FA L D + +R
Sbjct: 181 NIVGLKPSLGMISTAGVVPACRTLDCVSVFA-------------LTTDDALTALRVMAAP 227
Query: 206 FAEDCLQ-------LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
AED +S++PS RV G+ + + F G + D + D+ L L
Sbjct: 228 DAEDPFSRERPVAAVSAMPS-RVRLGVPQKDQLQFFGDDLSARGYEDAL-DRWRRLGAEL 285
Query: 259 SEGNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
E + E Y L A R L E D V V + + A +
Sbjct: 286 VEIDVEPLYETARLLYEGPWVAERYLTIRELLETQPDAVHPVTRQI------TLAGAKLS 339
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP--PPKLQMDPSALEVFRARAFSL 374
+A ++ + A + G LV+PT P ++Q DP L +R +
Sbjct: 340 AADTFAALYRLQALRKHAERSFTGIDA-LVLPTAPTAYTVEEVQADPITLN---SRLGTY 395
Query: 375 LSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETLH 420
+ + C +++P + +D +P I+LLA G D L +L H
Sbjct: 396 TNFVNLLDLCGLAVPASIRNDGIPFGITLLAPAGRDAELASLGRVFH 442
>gi|374996382|ref|YP_004971881.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Desulfosporosinus orientis DSM 765]
gi|357214748|gb|AET69366.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Desulfosporosinus orientis DSM 765]
Length = 496
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 187/437 (42%), Gaps = 58/437 (13%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD +G T + +T L + GA +GK MDE
Sbjct: 72 PLEGIPMALKDNMCTEGVRTSCASKMLDNFLPPYNATVTERLR--ASGAILLGKLNMDEF 129
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN ++ NP + VPGGSS GSAVAV F+LG+DTGGS+R PAS+CG
Sbjct: 130 AMGSSTENSYFAQTRNPWNLECVPGGSSGGSAVAVAGDEAAFTLGSDTGGSIRQPASFCG 189
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF----AWDPKILNRVGRVLLQLADDVNLVRPS 202
+ G +P++ AVS G+I A S D +G F A + ++N + + V P
Sbjct: 190 VVGMKPTYGAVSRLGLIAFASSLDQIGPFTKTVADNALVMNAIAGHDPLDSTSVPFETPD 249
Query: 203 QVIFAEDCLQ--LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
F E+ ++ IP + +G+ V K I LG V + SL H
Sbjct: 250 YTKFLENDIKGLKIGIPREYFGEGIDPEVAKGIQAGIQTLKDLGAEVAE--CSLPH---- 303
Query: 261 GNKEQEYSIPS--LAALSSAMRLLQRYE-----FKNNHGDWVTTVKPD----LGPGISER 309
EY+IP+ L A + A L RY+ ++ + D + K GP + R
Sbjct: 304 ----TEYAIPAYYLIATAEASSNLARYDGVRYGYRADSNDVLGMFKKTRAEGFGPEVKRR 359
Query: 310 V-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL- 357
+ ++A AQK V+T ++ +L+ PT P P K
Sbjct: 360 IMLGTYALSSGYYDAYYLKAQK------VRTLIKQDFDKAFETFDVLLSPTAPTPAFKFG 413
Query: 358 --QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
DP A+ + + ++G +SIP G + LP+ + + K +G L +
Sbjct: 414 EKSADPLAMYLSDITTVPV----NMAGIPALSIPAGFVNGLPIGMQFMGKAFGEGTLYRV 469
Query: 416 VETL-----HNTLKEEL 427
T ++TLK L
Sbjct: 470 AYTFEQNTNYHTLKPNL 486
>gi|296109416|ref|YP_003616365.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [methanocaldococcus
infernus ME]
gi|295434230|gb|ADG13401.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
infernus ME]
Length = 433
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 197/417 (47%), Gaps = 35/417 (8%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ A + PL G A+K +V+G+ + + A A + +L GA
Sbjct: 37 LEKDEEAKKKPLYGKIVAVKANINVEGYTISCASKTLE--NYVAPYNATVIEKLLDAGAL 94
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG T MDE A +GE +YG NP A DR+PGGSSSGSA AV A+L D +LG+DTGG
Sbjct: 95 IIGITNMDEFACGSSGETSYYGPTKNPVAKDRIPGGSSSGSAAAVSAELCDIALGSDTGG 154
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R P+S+CG+ GF+PS+ VS G+ +A SFD +G A R +LL +
Sbjct: 155 SIRNPSSHCGVSGFKPSYGVVSRHGLCDLAMSFDQIGPIA------KRAEDLLLVM---- 204
Query: 197 NLVRPSQV--IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPS 253
N+++ V + + + + G+V+ + I + + G + KD
Sbjct: 205 NIIKGKDVRDTTTVETPEFKKLDVSKFKVGVVEEFMEAADEKIRKEIEKGIEVFKDMGCE 264
Query: 254 LQHFLSEGNKEQEYSIPSLAALS-----SAMRLL--QRYEFKNNH--GDWVTTVKPDLGP 304
+ H K + ++P+ ++ SA R +RY ++ G+ V + +G
Sbjct: 265 IVHL---NYKYLDLALPTYYLINYVEFFSATRRYDGRRYGYRIEEVCGEEVLR-RITIGS 320
Query: 305 GISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
IS++ + S + + LR + L+ D I+V PTVP P KL S +
Sbjct: 321 MISQKEY-----SGKYYKKALKARNLLRKEMIKLMKDIDIIVSPTVPKLPHKLGEKLSPM 375
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+++ ++L A + G ++P + +P+ + ++AK D +L+ + N
Sbjct: 376 DMYNYDVLTVL--ANICGVPAGTVPCSAINGIPIGLQIMAKPFEDEKVLSAMIEFEN 430
>gi|119491326|ref|ZP_01623380.1| amidase [Lyngbya sp. PCC 8106]
gi|119453490|gb|EAW34652.1| amidase [Lyngbya sp. PCC 8106]
Length = 464
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 182/403 (45%), Gaps = 30/403 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD+ G +T R + AT A A+ + GA +G MDE
Sbjct: 72 PLTGVPFAVKNLFDIAG-ITTLAGSKINRENPPATQDATAIQRLKQAGAILVGALNMDEY 130
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP + GGSS GSA AV A LV F+LGTDT GS+RVPAS CG
Sbjct: 131 AYGFVTENHHYGATPNPHDLSLISGGSSGGSAAAVAANLVPFTLGTDTNGSIRVPASLCG 190
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+FGF+P++ +S GVI + S D +G A R L +A ++++
Sbjct: 191 VFGFKPTYGRLSRGGVILFSSSLDHIGPLA----------RSLRDIATVYDILQ------ 234
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK-VPSLQHFLSEG---- 261
ED + + + R Q + +E G ++ +LG Y + P + +S+
Sbjct: 235 GED--KHDPVCTKRSPQLSLPELET--GIKNVKIAVLGGYFSEAWEPEVLEVVSQVAKAL 290
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
N Q+ IP +A L+ E N H + + D P +R A
Sbjct: 291 NVTQQMIIPEAHRAKAAAYLITACEGSNLHLANLRSRPQDFDPATRDRFLAGALIPATWY 350
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFRARAFSLLSIA 378
+ Q + + + IL+ PT P PK+ +M+ +E+ L +
Sbjct: 351 NQAQRFRRWYQQQVRETFRQVDILLAPTTPCVAPKIGQEKMNIDGVELLVRPNLGLYTQP 410
Query: 379 -GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
G +S+P+ LP+ + ++A ++ +L + + L
Sbjct: 411 LSFVGLPVLSVPVKRSGQLPLGVQIIAAPYNEALILRIAKRLE 453
>gi|78045871|ref|YP_362046.1| amidase [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|346723230|ref|YP_004849899.1| amidase [Xanthomonas axonopodis pv. citrumelo F1]
gi|78034301|emb|CAJ21946.1| glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346647977|gb|AEO40601.1| amidase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 486
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 166/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS-GGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R H S AV+ LS GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAA--VRAHCPPASRDAAVVQRLSDAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDLQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H AV GV P + D G FA L R+ V
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVAGPFATSVADLRRIHEV------------------ 267
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
L+ +PS V + F ++ ++ G LQ L+ N
Sbjct: 268 ----LRGQPLPSCHAGNLRVARLGGWFERNLDPDLEAG---------LQALLTACNSLSS 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 315 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 375 FAQWFADAMHALWDQVEVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|383774981|ref|YP_005454050.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium sp. S23321]
gi|381363108|dbj|BAL79938.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium sp. S23321]
Length = 601
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 179/410 (43%), Gaps = 26/410 (6%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+ A LPL G+ A+KD D G T P ++ T T + AV + + GA IG
Sbjct: 61 AKDAAGLPLYGVPVAVKDNIDALGFPTTAACPAFSYTP---THDSTAVERLRAAGAIIIG 117
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT +D+ A + G YG P N D +PGGSSSGSA AVGA LV SLGTDT GS R
Sbjct: 118 KTNLDQFATGLVGVRSPYGIPRNSIREDLIPGGSSSGSATAVGAGLVPLSLGTDTAGSGR 177
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
VPA I G +PS +STAG++P ++ D + FA V L L+ +
Sbjct: 178 VPAMLNNIVGLKPSLGMISTAGLVPACRTLDCISVFALT------VDDAALALS---VMA 228
Query: 200 RPSQV-IFAED--CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
P Q F+ D L+ PS+ + G+ ++ + +F G D +K + +L
Sbjct: 229 GPDQADPFSRDRPLGALTPFPSN-MRLGVPRNGQLIFFGDKKAEAAYADALK-RWTALGA 286
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVR 315
L E + E Y L L + +RY N + PD + P E R
Sbjct: 287 TLVEFDLEPFYETARL--LYEGPWVAERYLVIKN----LLASAPDTIHPVTREITAAGAR 340
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
+A LR + LV+PT P Q+ + +E +R +
Sbjct: 341 LTAADTFSALYRLQGLRKIAERTFANIDALVLPTAPTAYTTAQVLANPIE-LNSRLGTYT 399
Query: 376 SIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ + C +++P + D +P I+LLA G D L ++ H K
Sbjct: 400 NFVNLLDLCGLAVPAAMRADGIPFGITLLAPAGRDALLASIGRVFHADTK 449
>gi|187479140|ref|YP_787165.1| amidase [Bordetella avium 197N]
gi|115423727|emb|CAJ50277.1| putative amidase [Bordetella avium 197N]
Length = 442
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP--DWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
L+GL +IKD+FDV G V+ G+ D A + A AP V + GA +G+T M E
Sbjct: 68 LAGLPISIKDLFDVQGQVSTAGSRALDGA---APAVQDAPVVARLRQAGAILLGRTNMSE 124
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A+S G N HYGTP P +R+ GGS+SG AV V + +LGTDTGGS+R+P+++C
Sbjct: 125 FAFSGLGLNPHYGTPRAPHDENRIAGGSTSGGAVTVARGMAVAALGTDTGGSIRIPSAFC 184
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G+ GF+P+ S V G +P++ S D++G A
Sbjct: 185 GLTGFKPTASRVPRTGAVPLSSSLDSIGPLA 215
>gi|403745331|ref|ZP_10954269.1| Amidase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121559|gb|EJY55852.1| Amidase [Alicyclobacillus hesperidum URH17-3-68]
Length = 464
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 180/408 (44%), Gaps = 30/408 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +IKD+ D T +G + + H +TA V + S A +GK + E
Sbjct: 80 PLAGVPVSIKDLIDTTFAPTTYGQAKY-QGH-VPKATAVCVQRLQSAHAIIMGKAHLHEF 137
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ + EN H+G NP P R+ GGSS GSA +V A + S+GTDTGGSVR+PA+ G
Sbjct: 138 AFGVTNENPHFGPARNPFNPSRITGGSSGGSAASVAAGMALVSVGTDTGGSVRIPAALTG 197
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ A+ T GV P+A S D VG FA R V+ LA SQV
Sbjct: 198 VVGFKPTFGAIPTDGVYPLAPSLDHVGSFATSVLDAARTAEVMAGLAPGTW----SQVDA 253
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE---NVILGDYVKDKVPSLQHFLSEGNK 263
D + + GLV+S+ + + I +++V ++ F+
Sbjct: 254 QADT-------AHPIRAGLVQSLVDAYASEDVSEWFTAICTRLSRERVVAVAGFVPVDG- 305
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+E +I L + E H + D G ++ R+ SA
Sbjct: 306 -EEIAIHQGNILGA--------EAYATHAQALANHAADYGSDVAARLQAGRDVSAADYIA 356
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL----EVFRARAFSLLSIAG 379
+ + R + L + L++PTVP P P L + + E R +
Sbjct: 357 SLTFQRAFRTTMDDFLQQYDCLLLPTVPVPAPPLGAETVTVRGKSEAVRPLLTRFTNPWN 416
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
+SG +SIP G D LP+ + ++ G D L+++ + L+ L
Sbjct: 417 LSGLPAISIPAGNVDGLPMGLQIIGPRGQDAKLVHMAHIIETALQNVL 464
>gi|120609543|ref|YP_969221.1| amidase [Acidovorax citrulli AAC00-1]
gi|120588007|gb|ABM31447.1| Amidase [Acidovorax citrulli AAC00-1]
Length = 457
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 191/408 (46%), Gaps = 32/408 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD+FDV G VT G+ A A S A AV + + GA +G+T M E
Sbjct: 74 PLAGLPVSVKDLFDVRGQVTRAGSAVLADA-GPAPSDAAAVARLRAAGAVLLGRTNMSEF 132
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N H+GTP +P RV GGSSSG+A V L +LGTDTGGS+R+P+++CG
Sbjct: 133 AFSGLGLNPHHGTPAHPQDAGRVTGGSSSGAAATVALDLAAAALGTDTGGSIRIPSAFCG 192
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V AG P+++S D+VG A + VL D P+ +
Sbjct: 193 LTGFKPTARRVPLAGAYPLSRSLDSVGPLARSVDCCAILDAVLSGEGSDAA---PAGA-W 248
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
++L + D V GL V F E+ +L+ + G + +
Sbjct: 249 PLAGMRLGVV-QDLVMDGLEPEVAAAF-----ED------------ALRRLSAAGARIER 290
Query: 267 YSIPSLAAL---SSAMRLLQRYEFKNNHGDWV-TTVKPDLGPGISERVWEA-VRTSAQKI 321
+ L AL ++A L+ ++ + V +V P +++R +A I
Sbjct: 291 VAFAELHALPRINAAGGLIAAEAWQVHRARLVDASVAARYDPRVAQRTRRGDAILAADYI 350
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARAFSLLSIA 378
DV Q + L+AA LG ++PTV P L+ D + A S+
Sbjct: 351 DV-QDARVRLQAAAQERLGHLDAWLMPTVAVRAPLREPLEQDDAHFFATNALVLRNTSVI 409
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
C +S+P G D LPV +S+ HG+D +L + + L+ +
Sbjct: 410 NFLDGCALSLPCGAPDELPVGLSVAGLHGADARILQVGRAVEACLRAD 457
>gi|167579033|ref|ZP_02371907.1| indole acetimide hydrolase [Burkholderia thailandensis TXDOH]
Length = 447
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 182/415 (43%), Gaps = 31/415 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 48 ASGRRLPLAGVPFVIKDNLFTSDMPTRGASP--ALLGFGATCNATAVQQLLDAGAVPLGK 105
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N H+G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 106 ANMHELAFGITSANGHFGAVRNPHDPARLAGGSSGGTASAVAAG-IPFGLGTDTGGSVRI 164
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 165 PAAFCGVAGLRPTPRRYSTHGVLALSPTRDTVGTIAHSIDDLLLLDAVLTGDATE----- 219
Query: 201 PSQVIFAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
P+ V A + + P D + + + E+ L + +P L
Sbjct: 220 PAPVALAGLRIGVPDAPYFDGLDPAVAEMTERALAA-------LTNAGARLIPLAARALH 272
Query: 260 EGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS- 317
E ++ + I AL+ R +R + ++V + D I + +A +S
Sbjct: 273 EADEACGFPIAGFEALAYWQRFSAERLDLP--FAEFVARLGSDDVRHIFRTLIDAPPSSD 330
Query: 318 --AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRAR 370
A IDV QS+ A D + +PTV P + + P A AR
Sbjct: 331 AYAAAIDVLQSIVRWYDQAFHRTGVD--CIALPTVQCEAPLVAASGHDLPPDAAYALFAR 388
Query: 371 AFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
A + G VS+P GL H +PV + L G+D LL + + L
Sbjct: 389 VIRQTGPATLGGVPSVSVPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLL 443
>gi|194289556|ref|YP_002005463.1| amidase [Cupriavidus taiwanensis LMG 19424]
gi|193223391|emb|CAQ69396.1| putative AMIDOTRANSFERASE/AMIDASE [Cupriavidus taiwanensis LMG
19424]
Length = 458
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 177/419 (42%), Gaps = 52/419 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD++DV G +T + A AA V + + GA IG+T M E
Sbjct: 69 PLAGLPVSVKDLYDVAGEITRAASVVRADAAPAAADAP-VVARLRAAGAALIGRTNMTEF 127
Query: 87 AYSINGENKHYGTPTNPCA---PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A+S G N HYGTP NP P R+PGGSSSG+AV+V L +LG+DTGGS+R+PA+
Sbjct: 128 AFSGVGINPHYGTPANPAGGEGPGRIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPAA 187
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CGI GF+P+ V AG P++ + DT A
Sbjct: 188 LCGITGFKPTARRVPLAGAFPLSYTLDTACAMART------------------------- 222
Query: 204 VIFAEDCLQLSSIPSD-----RVTQGLVKSVEKLFGGHIIENVILGDY----VKDKVPSL 254
DC+ + S+ +D RVT + I ++L D + +L
Sbjct: 223 ---VSDCIAVDSVIADSAVLPRVTDAAATRLA------IPRQLLLDDLDPVVARAFDRAL 273
Query: 255 QHFLSEGNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
+ G + + +P L L++ A E H + + P ++ R+
Sbjct: 274 GRLSAAGVRLEHVDLPELGELAALNAHGGFSAAEAYAIHRHTLAARRDRYDPRVASRIDR 333
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARA 371
SA + + A + A L +V PTVP P++ + FR A
Sbjct: 334 GAGISAADYIDLGRARLDWIARMEARLDGFDAVVCPTVPMVAPEIAPLRTDDAHFFRVNA 393
Query: 372 FSLLSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQ 428
L + + + F C VS+P D LPV + L D LL L ++ +Q
Sbjct: 394 LLLRNTSAFNFFDGCSVSMPCHAPDELPVGLMLSHGPMRDASLLGTALALERIVQPIVQ 452
>gi|120404134|ref|YP_953963.1| amidase [Mycobacterium vanbaalenii PYR-1]
gi|119956952|gb|ABM13957.1| Amidase [Mycobacterium vanbaalenii PYR-1]
Length = 364
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 102/159 (64%), Gaps = 1/159 (0%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSI 90
+ A+KD+FDV G VT GNP A +AA A AV A+LS GAT + KT DE+A +
Sbjct: 1 MRVAVKDLFDVAGTVTAAGNPTLAAGPAAAHHAA-AVAALLSAGATVVAKTATDELAMGM 59
Query: 91 NGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 150
G N HYGTP NP APDRVPGGSSSGSA V + LGTDTGGS+RVPA++CG+ G
Sbjct: 60 FGVNAHYGTPPNPAAPDRVPGGSSSGSASLVAGGQAELGLGTDTGGSIRVPAAFCGLAGL 119
Query: 151 RPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
R +H + TAGV MA FDTVG A + L + VL
Sbjct: 120 RTTHGRIDTAGVRAMAPEFDTVGLMAVETSFLAKAFSVL 158
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 282 LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGD 341
L + + +G WV +P LG GI+ER+ A + +++V ++ +T R L LL
Sbjct: 221 LMSAQLWDTNGAWVAEARPVLGTGIAERIRAAASVTDAEVEVAEAQRTRFREHLHGLLAG 280
Query: 342 HGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIP------LGLHDN 395
+ V+PT P D +AL +R R + + A ++G Q+++P G +
Sbjct: 281 -AVAVLPTTMDAAPARTADHAALMAYRDRNLAFVVPASLAGAPQLTMPQGTVTDAGCGTD 339
Query: 396 LPVAISLLAKHGSDGFLLNLVETLH 420
PV SLL G D LL+L E +
Sbjct: 340 APVGASLLGLPGDDELLLSLAEAVQ 364
>gi|42526092|ref|NP_971190.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Treponema
denticola ATCC 35405]
gi|81570525|sp|Q73Q68.1|GATA_TREDE RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|41816204|gb|AAS11071.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Treponema denticola
ATCC 35405]
Length = 485
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 187/425 (44%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + + A A + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYY--APYNATVIDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F + + +G ++ D+ +
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEAADI-ALGLAVMAGKDEKD--ET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKIAIPKEF----LNTQGLDQEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDTGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|333911434|ref|YP_004485167.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanotorris igneus
Kol 5]
gi|333752023|gb|AEF97102.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Methanotorris igneus
Kol 5]
Length = 432
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 197/427 (46%), Gaps = 51/427 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + PL G A+K +V G+ + + A A + + + GA
Sbjct: 37 LEKNEKLKDKPLYGKIIAVKANINVKGYTISCASKTLE--NYIAPYDATVIKKLKANGAL 94
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG T MDE A +GE +YG NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 95 IIGMTNMDEFACGSSGETSYYGPTKNPKAEDRIPGGSSSGSAAAVAADLCDMALGSDTGG 154
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRV--GRVLLQ 191
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G A D +L + G+
Sbjct: 155 SIRNPASHCGVVGFKPSYGVVSRQGLCDLAMSFDQIGPITKNAEDALLLTNIIKGK---D 211
Query: 192 LADDVNLVRPSQVIFAEDCL---------QLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
+D + P F ++ + + + D++ + K +E +FG E V
Sbjct: 212 PSDSTTVETPK---FEKEDISNYKVGVVKEFMEVADDKIRDKIEKGIE-VFGDLGCEIVE 267
Query: 243 LG-DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLL--QRYEFKNNH--GDWVTT 297
L YV +P+ Y + + SA R +RY ++ G+ V
Sbjct: 268 LSYKYVDLALPT-------------YYLINYVEFFSATRKYDGRRYGYRIEEVCGEEVLR 314
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ +G ISE+ + S + + +R + +L D ++V PTVP P KL
Sbjct: 315 -RILIGKHISEKEY-----SGKYYKRALQARNVMRKEMMRILKDVDVIVGPTVPKLPHKL 368
Query: 358 QMDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
S +E++ A+ +L++ + G C +P G + +PV + + AK D +L+ +
Sbjct: 369 GEKLSPMEMY---AYDVLTVPTNICGICAGVVPCGDVNGIPVGLQIQAKPFEDQKVLSAM 425
Query: 417 ETLHNTL 423
L
Sbjct: 426 IAFEKAL 432
>gi|238026507|ref|YP_002910738.1| amidase [Burkholderia glumae BGR1]
gi|237875701|gb|ACR28034.1| amidase [Burkholderia glumae BGR1]
Length = 458
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 188/408 (46%), Gaps = 37/408 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ ++KD+FD+ G VT G+ A + APAV + GA +G+T M E
Sbjct: 73 PLAGIPVSVKDLFDIAGQVTRAGS-RALADAPPAAADAPAVARLRRAGAVLVGRTNMSEF 131
Query: 87 AYSINGENKHYGTPTNP----CAPD-RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
A+S G N HYGTP +P A D RV GGSSSG+AV+V + +LGTDTGGS+R+P
Sbjct: 132 AFSGLGLNPHYGTPRSPYRRAVAGDARVAGGSSSGAAVSVADGMAAAALGTDTGGSLRIP 191
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A+ CG+ GF+P+ S V G +P++ + D+ G V R+L LA V +RP
Sbjct: 192 AALCGLTGFKPTASRVPKDGGVPLSSTLDSFGPIGVSVACCALVDRILAGLAPRVPAMRP 251
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+ + +L + VT G+ V F + G + D + L +
Sbjct: 252 LEGV------RLGVL-DHYVTDGMDAEVTAAFSAALERLAAAGAILSDLRFAPLERLDDI 304
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTSAQK 320
N+ + + A + LL+R + P + R+ + T+A
Sbjct: 305 NR---FGFSPIEAYAWHRPLLERRRDTYD-------------PRVLARIMKGQPATAADY 348
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+D+ + L A L ++ PTVP PP+L + F AR +L+ +
Sbjct: 349 LDLLAARAAMLDEAERTLWPSVDAVLAPTVPVVPPRLAELERDDDAF-ARTNALI-LRNP 406
Query: 381 SGF-----CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
S F C +S+P D PV + + A D LL + +++ L
Sbjct: 407 SAFNFLDACALSVPCHQRDGAPVGLMIAAAPHRDDTLLAIGQSIEAVL 454
>gi|28871346|ref|NP_793965.1| hypothetical protein PSPTO_4204 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854597|gb|AAO57660.1| amidase family protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 442
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 180/412 (43%), Gaps = 40/412 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G S A AP+V + G S+GKT + E
Sbjct: 57 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 115
Query: 87 AYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+R+PA++
Sbjct: 116 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 175
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
+ GFR + S GV P+A + D+VG VR + V
Sbjct: 176 NSLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDALV 215
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I +D L S P+ + + L L ++E+ + V+D + L G
Sbjct: 216 I--DDLLCARSKPTSLLPRSLAGQ-RFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 272
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E A + ++++Q++ F + + L P + +R+ A
Sbjct: 273 IEMG--HCQAFQATLQVIQQHGWLGAAEAFALHQSLLDSDAASQLDPRVRKRLEAARHMP 330
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + + L+ L+ L D +L+ P+V P L + E+F + L +
Sbjct: 331 ASLLVNLYAARERLQEQLTLEL-DGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRL 389
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
VS+P G LP + L A G D LL T+ + L +
Sbjct: 390 TMPGSLLNMPGVSLPSGCDASGLPTGLLLSAPAGEDARLLRAALTVESLLNQ 441
>gi|357417637|ref|YP_004930657.1| amidase [Pseudoxanthomonas spadix BD-a59]
gi|355335215|gb|AER56616.1| amidase [Pseudoxanthomonas spadix BD-a59]
Length = 477
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 183/433 (42%), Gaps = 54/433 (12%)
Query: 3 SRDSDYGAFMEKFVLQPSSSAHQLP----LSGLTFAIKDIFDVDGHVTGFGNPDWARTHS 58
+R+ AF F + PS + P L+G+ FA+KD+FDV G T G R +
Sbjct: 68 ARNPALMAFTRIFAVDPSGQGVRTPAEGALAGVPFAVKDLFDVQGLPTTAGAA--MRVDA 125
Query: 59 A-ATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGS 117
A A A V + + GA +G T MDE AY N H+GT NP P R+ GGSS GS
Sbjct: 126 APAARDAEVVRRLKAAGAVLVGTTNMDEFAYGFATVNAHFGTTRNPHDPARLAGGSSGGS 185
Query: 118 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
A AV A LV F+LG+DT GS+RVPA+ CGI+G R +H V GV P Q+ D G FA
Sbjct: 186 AAAVAAGLVQFALGSDTNGSIRVPAALCGIYGLRSTHGQVPLQGVFPFVQALDVAGPFAR 245
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI 237
+L V V+ A+ L + R+ + GG
Sbjct: 246 SLDLLQTVHEVM-----------------ADTALAKIDVAGLRIAR---------LGGWF 279
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYS----IPSLAALSSAMRLLQRYEFKNNHGD 293
N+ P L+ L + E S +P A ++ E H
Sbjct: 280 ARNLD---------PDLRAGLDGISAALEISGPVELPQAEQSRRAAFVMTAMEGGFLHRQ 330
Query: 294 WVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP 353
+ T P + +R+ + A+ Q A++ L +L+ P VP
Sbjct: 331 ALRTNPDGFDPAVRDRLLAGLLQPAEHWLQVQRFAEWFGQAMARLWQHLDVLIAPAVPCV 390
Query: 354 PPKLQMDPSALEV------FRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHG 407
P++ D +++EV RA G++G +++PL LP+ + L+A G
Sbjct: 391 APRI--DQASIEVDGQQVSARANLGMFTQPLGLAGCPVLAVPLHRPGRLPLGVQLVAAPG 448
Query: 408 SDGFLLNLVETLH 420
+ L L L
Sbjct: 449 REDRLFALARQLE 461
>gi|209546175|ref|YP_002278065.1| hypothetical protein Rleg2_5792 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209539032|gb|ACI58965.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 456
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 175/402 (43%), Gaps = 44/402 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ A + A A V + G +IG+T M E A
Sbjct: 72 LDGIPIAWKDLFDIEGLATTAGSVVLA-ADAPAKRDAAVVGFLRQAGMVAIGRTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 131 FSGLGINPHYGTPVNPRGNDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-QLADDVNLVRPSQV 204
GI G++ + + GV P+A+S D++G F K + + ++A DV + RP Q
Sbjct: 191 GIVGYKATRGRHAMDGVYPLARSLDSLGPFCRGVKDAVWIDAAMRGRIAPDV-VERPLQA 249
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ + L +I D G++ + E L+ G
Sbjct: 250 L---ELLVPENIVFDGAEPGVIAAFEA---------------------GLERLQRAGVHV 285
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
IP+ A+ L+ RY F +H + + R RTS
Sbjct: 286 ARAVIPAFDAI---FDLMTRYGPLVTAEAFALHHERLAGPDADRMDHRVVMRTRLGSRTS 342
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
+ + A + L+GD +L PTV P + E+F A L
Sbjct: 343 LADYLAILEARKRMIADVERLVGDR-LLAFPTVAHVAPPIGPLEGDDELFFATNNKTLRN 401
Query: 378 AGVSGF---CQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNL 415
+ F C VSIP G +PV + L A D LL +
Sbjct: 402 TALGNFLDWCGVSIPCGTGASGMPVGLLLSATARRDETLLGV 443
>gi|385678337|ref|ZP_10052265.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Amycolatopsis sp.
ATCC 39116]
Length = 406
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 6 SDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
+D+GA++E+F LP +G+ FA+KD DV G T G P H A A
Sbjct: 10 TDFGAYVERF---------PLPETGIPFAVKDFLDVAGQTTRNGTPGLG--HHLAAEDAE 58
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKL 125
V + + G + +T + E+A+S+ NP AP+R GGSS GSAVAV
Sbjct: 59 VVARLRAAGYVPVARTTVPELAWSVRTPGCR-----NPWAPNRDAGGSSGGSAVAVATGD 113
Query: 126 VDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
V +LGTDTGGS+R+PA+ CG+ G RP+H V GV P+ S DTVG A
Sbjct: 114 VPVALGTDTGGSIRIPAALCGVAGLRPTHGTVPVRGVTPLVPSMDTVGPIA 164
>gi|427821143|ref|ZP_18988206.1| putative amidase [Bordetella bronchiseptica D445]
gi|410572143|emb|CCN20407.1| putative amidase [Bordetella bronchiseptica D445]
Length = 439
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 168/372 (45%), Gaps = 30/372 (8%)
Query: 59 AATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPC--APDRVPGGSSSG 116
AA A V + + GA +G+T M E AYS G N HYGTP NP A R+PGGSSSG
Sbjct: 89 AAVRDAVVVRRLRAAGAVIVGRTNMTEFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSG 148
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+AV+V + ++G+DTGGSVR+PA+ CG+ GF+PS VS GV+P++ + D++G A
Sbjct: 149 AAVSVTDGMASGAIGSDTGGSVRIPAALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 208
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
+ + +L DD ++ P+ A L+L ++P+ GL V F
Sbjct: 209 PSVRCCATLDAILAG-GDDADMPAPA----ALRGLRL-AVPTTLALDGLDAHVSATFAA- 261
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALS--SAMRLLQRYEFKNNHGDW 294
+L G E ++P A L+ ++ E H D
Sbjct: 262 ----------------TLAKLAEAGACIDEIAVPEFAQLADINSKGGFTAAEAWAWHRDL 305
Query: 295 VTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPP 354
+ P + R+ SA + + RA + A + + LV+PTVP
Sbjct: 306 IERAADRYDPRVVARIRRGADMSAADYIDLLAARQAWRAGVEARIAGYDALVLPTVPVVA 365
Query: 355 PKLQMDPSALEVFRARAFSLLSIAGVSGFCQ---VSIPLGLHDNLPVAISLLAKHGSDGF 411
P + ++ +F + +L + F +S+P PV + + A +GSD
Sbjct: 366 PAIADLEASDALFGSTNLLILRNPTLINFLDGSALSLPCHEAGTAPVGLMVAAANGSDRR 425
Query: 412 LLNLVETLHNTL 423
+L + + + L
Sbjct: 426 VLAIGMAIEDLL 437
>gi|116255628|ref|YP_771461.1| hypothetical protein pRL110427 [Rhizobium leguminosarum bv. viciae
3841]
gi|115260276|emb|CAK03380.1| half-amidase [Rhizobium leguminosarum bv. viciae 3841]
Length = 456
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 5/149 (3%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L G+ A KD+FD++G T G+ A+ A A V+A+L G ++G+T M E
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLAKNMPAKRDAA--VVALLRQAGMVAVGRTNMSEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 130 AFSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
GI G++ + + AGV P+A+S D++G
Sbjct: 190 NGIVGYKATRGRHAMAGVYPLAKSLDSLG 218
>gi|27376155|ref|NP_767684.1| allophanate hydrolase [Bradyrhizobium japonicum USDA 110]
gi|27349294|dbj|BAC46309.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA
110]
Length = 602
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 186/421 (44%), Gaps = 28/421 (6%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+ D A EK +P A +PL G+ A+KD D G T P ++ T T +
Sbjct: 49 EKDAIAEAEKLAARPD--AASMPLYGVPVAVKDNIDALGFPTTAACPAFSYTP---THDS 103
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
AV + + GA IGKT +D+ A + G YG P N D +PGGSSSGSA A+GA
Sbjct: 104 TAVERLRAAGAIIIGKTNLDQFATGLVGVRSPYGIPKNSIREDLIPGGSSSGSATALGAG 163
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
LV +LGTDT GS RVPA I G +PS +STAG++P ++ D + FA
Sbjct: 164 LVPLTLGTDTAGSGRVPAMLNNIVGLKPSLGMISTAGLVPACRTLDCISVFALT------ 217
Query: 185 VGRVLLQLADDVNLVRPSQV-IFAED--CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
V L L+ + P Q F+ D L+ P++ + G+ ++ + +F G
Sbjct: 218 VDDAALALS---VMAGPDQADPFSRDRPLGALTPFPAN-LRLGVPRNGQLIFFGDKKAEA 273
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
G+ +K + +L L E + E Y L L + +RY N + PD
Sbjct: 274 AYGEALK-RWTALGATLVEFDLEPFYETARL--LYEGPWVAERYLVIKN----LLASAPD 326
Query: 302 L-GPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
+ P E R +A LR + LV+PT P Q+
Sbjct: 327 MIHPVTREITAAGARLTAADTFSALYRLQGLRKIAERTFANIDALVLPTAPTAYTTAQVL 386
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETL 419
+ +E+ +R + + + C +++P + D +P I+LLA G D L ++
Sbjct: 387 ANPIEL-NSRLGTYTNFVNLLDLCGLAVPASMRADGIPFGITLLAPAGRDALLASIGRVF 445
Query: 420 H 420
H
Sbjct: 446 H 446
>gi|327306623|ref|XP_003238003.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton rubrum CBS
118892]
gi|326461001|gb|EGD86454.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton rubrum CBS
118892]
Length = 627
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 182/424 (42%), Gaps = 48/424 (11%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q PL+G+ +KDIFDV G T GN W + + AA TA AV ++ GA +GK
Sbjct: 203 QKPLAGVRLGVKDIFDVKGLKTSNGNRAWYQLYPAANRTAIAVQNLVDAGAVVVGKMKTS 262
Query: 85 EMAYSINGENK-----HYGTPTNPCAPD-RVPGGSSSGSAVAVGAK-LVDFSLGTDTGGS 137
+ A NGE Y P NP + PG SS+G A A +D +LG+DTGGS
Sbjct: 263 QFA---NGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEAAYPWLDIALGSDTGGS 319
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R P+ G+FG RPSH VS G +P+A FDT G A DP++ + L +
Sbjct: 320 IRSPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPRLWAAAAKALYGAKIKMT 379
Query: 198 LVRPSQVIFAEDCLQLSSIPS---DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
PS+++ + + P D + G ++ V + H+ I + P
Sbjct: 380 KSYPSRIL----AVGFPTKPKSDLDVLVLGFIEKVARFLSAHVEVFDIAATWAA-TYPRG 434
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV 314
+ N E L+A A L R F +H P + P R W
Sbjct: 435 SPLAAVVNNTYEI----LSAKEQAR--LVRDVFYADHAAAHGGRFPHVNPAPLNR-WALG 487
Query: 315 RTSAQKIDVCQSVKTEL-----RAAL---SALLGDHGILVIPTVPGPPPKLQMDPS-ALE 365
+S I ++ KT R+ L + + +L +P +P P + P AL
Sbjct: 488 DSSKATIAEAEANKTRFMDWFNRSILPSGNTSCSEKLLLYMPRIPVPKYRDTYRPGPALP 547
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGL----------HDNLPVAISLLAKHGSDGFLLNL 415
AF+ I+ +SG + IP+G + LPV + ++A DG L +L
Sbjct: 548 ----SAFNTSRISVMSGTPDMVIPIGQVAYRSAVTNHTEYLPVTVDIMAAKNCDGMLFSL 603
Query: 416 VETL 419
+E L
Sbjct: 604 IEDL 607
>gi|163853123|ref|YP_001641166.1| allophanate hydrolase [Methylobacterium extorquens PA1]
gi|163664728|gb|ABY32095.1| allophanate hydrolase [Methylobacterium extorquens PA1]
Length = 611
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 179/408 (43%), Gaps = 23/408 (5%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L P A++ PL G+ FA+KD DV G T PD+A T A TAPAV +L+ GA
Sbjct: 58 LGPFDPANK-PLWGVPFAVKDNVDVAGLPTTAACPDFAYTPQA---TAPAVERLLAAGAI 113
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+GKT +D+ A + G Y P N P VPGGSSSGSAVAV LV F+LGTDT G
Sbjct: 114 LVGKTNLDQFATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAG 173
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S RVPA I G +PS +VS GV+P ++ DT+ FA + V R++
Sbjct: 174 SGRVPAGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADAVFRIMAGYDPQD 233
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
R V L P RV G+ + +F G + + D
Sbjct: 234 PYSRALPVPPRPGALP----PGLRV--GVPDAAGLIFAGDALSASAFDGALADLHTVTGA 287
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVR 315
+ + +++ L L + + +RY+ + +P+ L P + A
Sbjct: 288 AATAVDLAPFFAVAGL--LYAGPWVAERYQAIRGFMEE----RPEALHPTTRAIISAATG 341
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDPSALEVFRARAFS 373
SA ELR A + +LV+PT P P L DP + +
Sbjct: 342 HSAADAFAGLYRLAELRRATEPVWRGIDVLVVPTYPRPRRVADLAADPVGPN---SELGT 398
Query: 374 LLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
+ + C +++P D LP ++L+A G+DG + L LH
Sbjct: 399 YTNFVNLLDLCALAVPGRFRADGLPSGVTLIAPRGADGLIAELGARLH 446
>gi|148553810|ref|YP_001261392.1| amidase [Sphingomonas wittichii RW1]
gi|148499000|gb|ABQ67254.1| Amidase [Sphingomonas wittichii RW1]
Length = 452
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 181/402 (45%), Gaps = 29/402 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G ++K + DV G +T G+ R A S + V + S GA +G T M E A
Sbjct: 58 LDGALVSVKAMLDVQGLLTDAGSATL-RGRPPAASDSSVVSRLRSAGAVVVGTTQMTEFA 116
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N ++ NP +R+ GGSSSG+AV+VG L D ++G+DTGGS+R+PA+ CG+
Sbjct: 117 FSAVGTNPNFPALGNPHDAERICGGSSSGAAVSVGGGLADIAIGSDTGGSLRIPAALCGL 176
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ S V AG P++Q+ D++G A K L LAD V + + A
Sbjct: 177 VGFKPTASRVPAAGSFPLSQTLDSIGPIARSVK--------LCALADSVLATGKASDVAA 228
Query: 208 --EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
D +L + R+ +G ++V F G I+++ D V+ SL+ L E +
Sbjct: 229 IGVDRFRL-VVARGRLFEGCDQAVLDAFDGA-IDHLRRSD-VRISDGSLEPILDELARID 285
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
L++ +R +T + P + P R+ SA
Sbjct: 286 GLGTFPPVELAATLR-----------SSGITDLAP-VDPNTRSRIEAGSGLSAVDYLEMA 333
Query: 326 SVKTELRAALSALLGDHGILVIPTVP--GPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
++ +L + D + V+PTVP P DP A +A +
Sbjct: 334 RLRRQLADGFERSMEDGEVYVVPTVPIVAPTTSSVSDPEQFRRINALLLRNPRVANLLDC 393
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+SIPL LPV + L+ + +D LL++ L L +
Sbjct: 394 PSISIPLPSR-GLPVGMMLIGRRNADRHLLSIALRLEGILAQ 434
>gi|422657056|ref|ZP_16719499.1| hypothetical protein PLA106_06545 [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331015616|gb|EGH95672.1| hypothetical protein PLA106_06545 [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 457
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 180/412 (43%), Gaps = 40/412 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 87 AYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+R+PA++
Sbjct: 131 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
+ GFR + S GV P+A + D+VG VR + V
Sbjct: 191 NSLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDALV 230
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
I +D L S P+ + + L L ++E+ + V+D + L G
Sbjct: 231 I--DDLLCARSKPTSLLPRSLAGQ-RFLVDRAVLEDERVAPAVRDNLLRAVEALRAGGAL 287
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E A + ++++Q++ F + + L P + +R+ A
Sbjct: 288 IEMG--HCQAFQATLQVIQQHGWLGAAEAFALHQSLLDSDAASQLDPRVRKRLEAARHMP 345
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + + + L+ L+ L D +L+ P+V P L + E+F + L +
Sbjct: 346 ASLLVNLYAARERLQEQLTLEL-DGALLITPSVAHVAPPLAPLLNDEELFIQTNLATLRL 404
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
VS+P G LP + L A G D LL T+ + L +
Sbjct: 405 TMPGSLLNMPGVSLPSGCDASGLPTGLLLSAPAGEDARLLRAALTVESLLNQ 456
>gi|395786650|ref|ZP_10466377.1| hypothetical protein ME5_01695 [Bartonella tamiae Th239]
gi|423716456|ref|ZP_17690646.1| hypothetical protein MEG_00186 [Bartonella tamiae Th307]
gi|395422948|gb|EJF89144.1| hypothetical protein ME5_01695 [Bartonella tamiae Th239]
gi|395429385|gb|EJF95453.1| hypothetical protein MEG_00186 [Bartonella tamiae Th307]
Length = 445
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 20/230 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G +T G + A A V + G IGKT + E
Sbjct: 62 PFDGVPIAYKDLFDVAGTLTTAGAATCLKAPKAQND-ASVVAKLAQFGMVCIGKTNLTEF 120
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS G NK++GTP+N C D +PGGS SG+AV V +V S GTDT GS+ +PA + G
Sbjct: 121 AYSGLGLNKYFGTPSNACDEDYIPGGSLSGAAVCVAKNIVPLSFGTDTAGSICIPACFNG 180
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK---ILNRVGR-------VLLQLADDV 196
+ G+R S + GV P+A S DT+G A K IL+++ R L+ +D+
Sbjct: 181 VIGYRSSMKRYAQQGVYPLASSLDTIGPLAKSVKDCIILDQLLRSSNEEDTCLMHDVEDM 240
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL--FGGHIIENVILG 244
L+ I A++ I ++ +TQ + ++ L G +I+E I
Sbjct: 241 KLIVDWDFITAQN------IQAEVMTQ-FNQCIDHLKECGVNIVEKTIFA 283
>gi|410944443|ref|ZP_11376184.1| amidase [Gluconobacter frateurii NBRC 101659]
Length = 444
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 176/400 (44%), Gaps = 41/400 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F IKD+FDV G VT G+ A AT A V ++ GA + T MDE A
Sbjct: 71 LAGVPFGIKDLFDVAGQVTTAGSKVLA-NDPPATRDAALVARLIDAGAIPVALTNMDEFA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y +N H+G NP APD + GGSS GSA V A+L LG+DT GS+RVPAS CG+
Sbjct: 130 YGFATDNSHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPASLCGV 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R + + G P S DTVG F AD +R
Sbjct: 190 WGLRATQGRLPVEGSYPFVASLDTVGPF-----------------ADSAGGLRAC----F 228
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
E +Q + P D G +K V +L GG EN + + D V +L L Q
Sbjct: 229 EALVQTENAPVD---VGALK-VARL-GGWFAEN--MSAPMADAVDALGERL---GATQTV 278
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+P +A ++ ++ E H + T + P + +R+ A I +
Sbjct: 279 ELPEVARARASAFVISASEGAALHLHRLRTQAQNYDPAVRDRLLAGALLPASLIFQAHRL 338
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV------FRARAFSLLSIAGVS 381
+ RA + D IL+ P V G P+ D +EV RA ++
Sbjct: 339 RNWFRARMHEAFTDADILLAPAVVGEAPRF--DQPLIEVGGKMVSARANLGLYTQPLTLA 396
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
GF +++P+ LP+ L+A+ G + LL L E+L
Sbjct: 397 GFPVLTVPMKTA-GLPLGAQLIARPGREDLLLALGESLER 435
>gi|409405650|ref|ZP_11254112.1| amidase family protein [Herbaspirillum sp. GW103]
gi|386434199|gb|EIJ47024.1| amidase family protein [Herbaspirillum sp. GW103]
Length = 450
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 194/409 (47%), Gaps = 40/409 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ ++KD+FDV G T G+ R AA + A V +L GA IGKT M E
Sbjct: 68 PLEGVPVSVKDLFDVAGETTLAGSVVL-RGKPAAAAHAVVVQNLLKAGAIVIGKTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP N + R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 127 AYSGLGINPHYGTPQNAWERNVEGGRIPGGSSSGAAISVTDGMAFAAVGSDTGGSVRIPS 186
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ G+ GF+P+ + VS GV+P++ D++G A + + VL A + P
Sbjct: 187 ALNGLTGFKPTAARVSMQGVLPLSAYLDSIGPLAVSVECCAIMDAVLAGEAYVSVVAHPL 246
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+ L+L + P++ V G+ ++V K + +L + G
Sbjct: 247 R------GLRLLA-PTNIVLDGMDETVGKAYRA-----------------ALDKLAAAGA 282
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-----RTS 317
+ +P+ AL +A+ + + W + + G +RV + ++
Sbjct: 283 VIVQAEVPAFNAL-AAINAKGGFTAAEAYA-WHRALIAENAAGYDQRVVSRILRGKDMSA 340
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A +DV + + A + A L + LV+PTVP P++ ++ + + A +L
Sbjct: 341 ADLLDVLHA-RPRWIAEVQAQLAGYDALVMPTVPIVAPRIAELQASDDAYYAANGKMLRN 399
Query: 378 AGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ F C VS+P + PV +SL A G+D LL++ + L
Sbjct: 400 PTLINFLDGCAVSLPCHAAGSAPVGLSLAAAGGADKRLLSMALAVEGLL 448
>gi|284045038|ref|YP_003395378.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Conexibacter
woesei DSM 14684]
gi|283949259|gb|ADB52003.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Conexibacter woesei
DSM 14684]
Length = 488
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 194/430 (45%), Gaps = 43/430 (10%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+ +AH PL G+ A+KD+F +G + G+ A TA V + G+T +G
Sbjct: 61 TGAAHDAPLHGVPLAVKDLFCTEGVPSQSGSRILAGYRP--PYTAHVVEQLERAGSTLLG 118
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT DE A + EN +G NP +RVPGGSS GSA AV A L ++LGTDTGGS+R
Sbjct: 119 KTNQDEFAMGSSNENSAFGPVRNPWDRERVPGGSSGGSAAAVAAGLAPWALGTDTGGSIR 178
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNR--VGRVLLQLAD 194
PA+ CGI G +P++ +VS G+I A S D G F D +L R VGR D
Sbjct: 179 QPAALCGIVGLKPTYGSVSRYGMIAFASSLDQAGPFTRDVTDAALLYRHMVGR---DERD 235
Query: 195 DVNLVRPSQVIFAEDC----LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK-D 249
+L P + + ++L +P + +G+ V + F + LG V+
Sbjct: 236 STSLAHPDAIELPKGVDLKGIRL-GVPEELTGEGIESGVREAFNATLALAEQLGATVETT 294
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGD-----WVTTVKPDL 302
+P H LS Y + + A SS + RY + D +V T
Sbjct: 295 HLPHAPHALS------AYYLIAPAEASSNLARFDGVRYGHRTQDPDDLLDMYVRTRAEGF 348
Query: 303 GPGISERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
GP + R+ S+ D Q V+T++ A G +V PT P +L
Sbjct: 349 GPEVKRRIMLGTYALSSGYYDAYYGRAQKVRTKISEDFRAAFGSFDFIVTPTAPTVAFRL 408
Query: 358 ---QMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
DP LE++ ++ +S+AG+ +SIP GL D LPV + S+ LL
Sbjct: 409 GEKTADP--LEMYLQDFCTVPMSLAGIPA---ISIPNGLSDGLPVGFQIAGPAFSENRLL 463
Query: 414 NLVETLHNTL 423
N L L
Sbjct: 464 NAAYVLEQAL 473
>gi|422299795|ref|ZP_16387346.1| amidase [Pseudomonas avellanae BPIC 631]
gi|407988199|gb|EKG30806.1| amidase [Pseudomonas avellanae BPIC 631]
Length = 457
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 91/149 (61%), Gaps = 3/149 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G+ A KD+FDV G VT G S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP NP + R+PGGSSSGSAVAV A +V ++GTDT GS+R+PA++
Sbjct: 131 AYSGLGLNPHFGTPINPKSDSSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|85716667|ref|ZP_01047636.1| amidase [Nitrobacter sp. Nb-311A]
gi|85696507|gb|EAQ34396.1| amidase [Nitrobacter sp. Nb-311A]
Length = 449
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 180/410 (43%), Gaps = 33/410 (8%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
SA P +G+ +IKD+FDV+G V+ G+ AA AP V + G IG+T
Sbjct: 65 SAAPSPYAGIPVSIKDLFDVEGQVSRAGSLTLKDAPPAAKD-APVVARLRRAGFVVIGRT 123
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
M E AYS G N HYGTP NP D VPGGSSSG+AV++ + +LGTDTGGS R
Sbjct: 124 NMTEFAYSGLGINPHYGTPKNPWRRDIGYVPGGSSSGAAVSITDGMAYGALGTDTGGSCR 183
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+PA+YCGI G++P+ V G IP++ + D+ G A + VL + + V
Sbjct: 184 IPAAYCGIVGYKPTARRVPLDGGIPLSVTLDSYGPIARSVGCCAVLDAVL--TGEPIAQV 241
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
P V L+L ++P+ + L +V + F E + D + D + H
Sbjct: 242 VPRPV----RGLRL-AVPTTVMLDDLNPAVARAF-----ERAL--DRLADAGALIDHI-- 287
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNN---HGDWVTTVKPDLGPGISERVWEAVRT 316
++P + +A+ + + + H + P + R+
Sbjct: 288 --------AVPEFGEV-AALNVGGGFAAAESWAWHRALIAEKAELYDPRVLSRIRRGESL 338
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL-- 374
SA +++ + A + + L+ PTV PP + +A SL
Sbjct: 339 SAADYVDLLTIRRPIIAGFERRVAPYDALIAPTVAITPPVMADLADDAAYVKANMLSLRN 398
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
S+ + C +S+P PV + L A GSD + L + ++
Sbjct: 399 CSLINILDGCAISLPCHREGEPPVGLMLAAAGGSDRRIFELAAAIEKIVR 448
>gi|21241080|ref|NP_640662.1| amidase [Xanthomonas axonopodis pv. citri str. 306]
gi|21106376|gb|AAM35198.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas axonopodis pv.
citri str. 306]
Length = 470
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 166/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R H S AV+ L GA +G MDE
Sbjct: 92 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 149
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 150 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 209
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H AV GV P + D VG FA L V
Sbjct: 210 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCV--------------------- 248
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +PS + V + F ++ ++ G LQ L+ N
Sbjct: 249 -YDVLRGQPLPSCHAGKLRVARLGGWFQRNLDPDLEAG---------LQALLAACNSLAS 298
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 299 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 358
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 359 FAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAA 418
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 419 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 457
>gi|254511785|ref|ZP_05123852.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
[Rhodobacteraceae bacterium KLH11]
gi|221535496|gb|EEE38484.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
[Rhodobacteraceae bacterium KLH11]
Length = 455
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 104/173 (60%), Gaps = 10/173 (5%)
Query: 13 EKFVLQPSSSAHQL-------PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP 65
E+ + + +SA +L PL G+ ++KD+ D++G VT + + R AA A
Sbjct: 52 ERALSEAKASARRLAQNRPLSPLDGVPISLKDLIDLEGEVTTAASALY-RDAPAAKRDAI 110
Query: 66 AVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGA 123
+ + G IGK + E AYS G N H+GT NP +PD R PGGSSSG+AV++ +
Sbjct: 111 VAQNLSAAGMICIGKVNLTEFAYSGIGLNPHFGTAINPLSPDVPRAPGGSSSGTAVSISS 170
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+V S+G+DTGGSVR+PAS+ G+ G++ S +ST GV +++ FDT+G A
Sbjct: 171 GIVPCSIGSDTGGSVRIPASFNGLVGYKSSEGRISTQGVFALSRMFDTMGPLA 223
>gi|167617145|ref|ZP_02385776.1| indole acetimide hydrolase [Burkholderia thailandensis Bt4]
gi|257141031|ref|ZP_05589293.1| indole acetimide hydrolase [Burkholderia thailandensis E264]
Length = 447
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 185/416 (44%), Gaps = 33/416 (7%)
Query: 21 SSAHQLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+S +LPL+G+ F IKD +F D G +P A AT A AV +L GA +G
Sbjct: 48 ASGRRLPLAGVPFVIKDNLFTSDMPTRG-ASP--ALLGFGATCNATAVQQLLDAGAVPLG 104
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
K M E+A+ I N H+G NP P R+ GGSS G+A AV A + F LGTDTGGSVR
Sbjct: 105 KANMHELAFGITSANGHFGAVRNPHDPARIAGGSSGGTASAVAAG-IPFGLGTDTGGSVR 163
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 164 IPAAFCGVAGLRPTPRRYSTHGVLALSPTRDTVGTIAHSIDDLLLLDAVLTGDATE---- 219
Query: 200 RPSQVIFAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
P+ V A + + P D + + + E+ L + +P L
Sbjct: 220 -PAPVALAGLRIGVPDAPYFDGLDPAVAEMTERALAA-------LTNAGARLIPLAARAL 271
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D I + +A +S
Sbjct: 272 HEADEACGFPIAGFEALAYWQRFSAERLDLP--FAEFVARLGSDDVRHIFRTLIDAPPSS 329
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV +S+ A D + +PTV P + + P A A
Sbjct: 330 DAYAAAIDVLRSIVRWYDQAFHRTGVD--CIALPTVQCEAPLVAASGHDLPPDAAYALFA 387
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
R A + G VS+P GL H +PV + L G+D LL + + L
Sbjct: 388 RVIRQTGPATLGGVPSVSVPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLL 443
>gi|443470038|ref|ZP_21060174.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Pseudomonas
pseudoalcaligenes KF707]
gi|442899569|gb|ELS26003.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Pseudomonas
pseudoalcaligenes KF707]
Length = 367
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 178/403 (44%), Gaps = 55/403 (13%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP-------AVLAVLSGGATSIGKTI 82
G T +KD DV GH T R S A AP V A+L G GKT
Sbjct: 11 GRTVMVKDTIDVAGHPT--------RASSRALDEAPDAPRHAEVVQALLDAGCRITGKTS 62
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
+ E+A+ G N GT NP P R+PGGSSSGSA AV A L DFSLGTDTGGSVR+PA
Sbjct: 63 LHELAFGTTGLNAWTGTAENPRYPGRIPGGSSSGSAAAVAAGLCDFSLGTDTGGSVRIPA 122
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ CG+FG +P+ +S GV+P S D VG FA R+ L +
Sbjct: 123 ACCGVFGLKPTFGRISRVGVMPAESSLDCVGPFA---------ARIDLLI---------- 163
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHFLSEG 261
+ + A D + P + V G+V IE + D+ D++P
Sbjct: 164 EAMAAMDPGFKALPPVEGVRIGVVPVSAHPEVLAAIETALKAIDFPLDRMP--------- 214
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+P + A A + E N G + T +G ++ R+ A TS Q +
Sbjct: 215 -------LPGMQAAYDAGLAIINRETWNACGHLLETGL--VGADVAARLQAASLTSDQAL 265
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
++V+ A + A L IL +PT+P P ++ AF + ++
Sbjct: 266 ADAEAVRRAFTAEVDAALDRCPILALPTMPDYPARVADASDTRAAIGMTAF--VRPFNLT 323
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
G +SIPL LPV + L+A G+D LL + L L+
Sbjct: 324 GHPALSIPLEGASKLPVGLQLVAAKGADERLLAVARELVRRLE 366
>gi|378951512|ref|YP_005209000.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas fluorescens F113]
gi|359761526|gb|AEV63605.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas fluorescens F113]
Length = 451
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 191/417 (45%), Gaps = 57/417 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSG-GATSIGKTIMDEM 86
L G+ +A+KD+ DV G T G+ R + + AV+A L+ G +GKT + E
Sbjct: 64 LDGIPYAVKDLLDVAGSRTTAGS--ITRIDAPMAAVDAAVIAALTAQGMIPMGKTNLTEF 121
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N H+GTP + D RVPGGSSSGSA+AV +V ++GTDT GS+R+PA++
Sbjct: 122 AYSGLGLNPHFGTPVSDLMGDDSRVPGGSSSGSAIAVQRGIVSSAIGTDTAGSIRIPAAF 181
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ G++ S S AGV P+A + D++G FA
Sbjct: 182 NGLVGYKASTGRYSMAGVHPLAVTLDSLGSFART-------------------------- 215
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFG-GHIIENVILGD-----YVKDKVPSLQHFL 258
DC L + + R G+V L G ++++ ++ D V + S+ L
Sbjct: 216 --VADCAALDA--AMRGFSGVVIQAANLSGLRFLVDDGVMADPALQPAVHHNLVSMMERL 271
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT---TVKPDLGPGISERVWEAVR 315
E + EY ++ ++ L+ R + W V+ LG + RV +R
Sbjct: 272 REAGAQVEYR--TIVTVAHTRELISRSGWLGAIEAWRLLGPVVEGPLGARMDRRVQARLR 329
Query: 316 TSAQKIDVCQSVKTE-LRAALSALLGDH---GILVIPTVP--GPP-PKLQMDPSALEVFR 368
SA++ID+ + LR L A + D ILV+PTV PP L+ D +
Sbjct: 330 -SAKEIDLATEARIRHLREGLMAAIEDELDGAILVMPTVKHVAPPMAPLENDDALFAAVN 388
Query: 369 ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLL--AKHGSDGFLLNLVETLHNTL 423
SL I + V+IP G D++ +A S L G D LL+ + +TL
Sbjct: 389 LETLSLTMIGSLLDMPGVAIPSG-KDSVGLATSTLFSTTRGHDDQLLSAALAIESTL 444
>gi|154483459|ref|ZP_02025907.1| hypothetical protein EUBVEN_01162 [Eubacterium ventriosum ATCC
27560]
gi|149735711|gb|EDM51597.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Eubacterium ventriosum ATCC 27560]
Length = 491
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 185/419 (44%), Gaps = 73/419 (17%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ AIKD +T + + T +A AV+ + GA IGKT MDE
Sbjct: 71 PLAGVPVAIKDNMCTRDKLTTCSSKILGNFY--PTYSAEAVINLEKAGAVIIGKTNMDEF 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E YG NP + VPGGSS GS AV A+ ++LG+DTGGS+R P+S+CG
Sbjct: 129 AMGSTTETSFYGPTKNPWNKEHVPGGSSGGSCAAVAAEECSYALGSDTGGSIRQPSSFCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA------------D 194
+ G +P++ VS G+I S D +G A D + +L +A D
Sbjct: 189 VTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKD---VTDCTTILETIASYDSKDSTSVKRD 245
Query: 195 DVNLVRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS 253
D N ED L IP D +GL V++ I++ V D +KDK
Sbjct: 246 DYNFTEA----LVEDVKGLKIGIPKDYFGEGLEPEVKE----AILKAV---DVLKDKGAI 294
Query: 254 LQHF-LSEGNKEQEYSIPSLAALSSAM--RLLQRY----------EFKNNHGDWVTTVKP 300
++ F LS EY+IP+ ++SA L R+ E+ H + T
Sbjct: 295 VEEFDLS----LVEYAIPAYYVIASAEASSNLSRFDGVKYGYRTEEYNGLHNMYKKTRSE 350
Query: 301 DLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
G + R+ ++A A + K ++ A + +++ P
Sbjct: 351 GFGEEVKRRIMLGSFVLSSGYYDAYYLKALR------TKALIKKAFDEAFAKYDVIIGPA 404
Query: 350 VPGPPPKLQ---MDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDN-LPVAISLL 403
P PKL DP ++++ +++ +++AG+ G +S+P G N LP+ + ++
Sbjct: 405 APTTAPKLGDSLSDP--IKMYLGDIYTISVNLAGLPG---ISVPCGQDSNGLPIGMQII 458
>gi|449112783|ref|ZP_21749329.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ATCC 33521]
gi|449115000|ref|ZP_21751468.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ATCC 35404]
gi|448954443|gb|EMB35225.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ATCC 35404]
gi|448954900|gb|EMB35668.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema denticola
ATCC 33521]
Length = 485
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 187/425 (44%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL G+ A+KD + G + + + A A + +L GA +G+
Sbjct: 68 SFDEKPLLGMPIAVKDNISMAGKLCTCCSRSLQGYY--APYNATVIDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F + + +G ++ D+ +
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEAADI-ALGLAVMAGKDEKD--ET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKIAIPKEF----LNTQGLDQEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDTGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>gi|218529262|ref|YP_002420078.1| allophanate hydrolase [Methylobacterium extorquens CM4]
gi|218521565|gb|ACK82150.1| allophanate hydrolase [Methylobacterium extorquens CM4]
Length = 625
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 184/415 (44%), Gaps = 53/415 (12%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
+ PL G+ FA+KD DV G T D+A S TAP V +L+ GA IGKT +D
Sbjct: 72 EKPLWGVPFAVKDNLDVAGLPTTAACADFAFVPS---ETAPCVARLLAAGAILIGKTNLD 128
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
+ A + G + P N D VPGGSSSGSAVAV LV F+LGTDT GS RVPA
Sbjct: 129 QFATGLVGLRTPHPAPRNALNADLVPGGSSSGSAVAVAHGLVAFALGTDTAGSGRVPAGL 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL--LQLADDV--NLVR 200
+ G +PS +VS+ G++P ++ DTV FA +RV R++ AD +L
Sbjct: 189 NNVVGLKPSLGSVSSRGLLPACRTLDTVSVFAGTVADADRVFRIMAAYDAADPYSRDLPV 248
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P+Q L++ G+ + FGG + V L +
Sbjct: 249 PTQPPGLPPGLRV----------GMPDAASLRFGGDPLSEAAF-------VAGLDDLATL 291
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+ + + A+++ + Y+ G WV + P I ER +A+ + +
Sbjct: 292 TGRPDAVDLAPMFAIAALL-----YD-----GPWVAERYQAVRPLI-ERSPQALHPTTRA 340
Query: 321 IDVCQSVK------------TELRAALSALLGDHGILVIPTVPGP--PPKLQMDPSALEV 366
+ + ELR A A+ +LV+PT P P +L++DP
Sbjct: 341 VIGRATAFTAADAFAGLYRLAELRRAADAVWEHIDVLVVPTYPRPVACAELEVDPIGPN- 399
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
+ + + + C +++P D LP ++L+A G DG L L LH
Sbjct: 400 --SELGTYTNFVNLLDLCALAVPGRFRTDGLPAGLTLIAPRGRDGLLAALGARLH 452
>gi|298674976|ref|YP_003726726.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanohalobium
evestigatum Z-7303]
gi|298287964|gb|ADI73930.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanohalobium
evestigatum Z-7303]
Length = 475
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 184/415 (44%), Gaps = 38/415 (9%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT--STAPAVLAVLSGGATSIG 79
+ H L+G+ A+KD DG T +R T A V + S GA IG
Sbjct: 55 NGHNGILAGVPVAVKDNISTDGIPTTC----CSRILEGYTPPYDAHVVERLKSEGAIVIG 110
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT MDE A + E YG NP +VPGGSS GSA + A SLG+DTGGSVR
Sbjct: 111 KTNMDEFAMGTSTETSCYGPTLNPWDTGKVPGGSSGGSAAVIAADEAPVSLGSDTGGSVR 170
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADD 195
PASYCG+ G +P++ VS G+I A S + +G A + +++ +G + +
Sbjct: 171 CPASYCGVVGLKPTYGTVSRYGLISYANSLEQIGPLANNVSDVAIMMDVIGGHDTRDSTS 230
Query: 196 VNLVRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPS 253
V+ Q +D L IP + +G+ VE+ I + +G + K +P+
Sbjct: 231 VSQKTNYQNALKDDVNGLKIGIPEEYFGEGIYPEVEESVWNAIHKFEDMGATWEKVSMPN 290
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVW 311
+ LS Y I +++ SS + RY ++ + +W G V
Sbjct: 291 TSYALS------AYYIIAMSEASSNLARFDGTRYGYRADGDNWHVMASRTRAQGFGTEVQ 344
Query: 312 EAVRTSAQKIDV---------CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---M 359
+ + V+T ++ L + +L+ PT+P KL
Sbjct: 345 RRILLGTYALSAGYYDKYYLKALKVRTLVKQDFENALSNVDVLMTPTMPTTAFKLGEKIK 404
Query: 360 DPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
DP L ++ A ++ +++AGV +S+P G D LP+ + ++ KH ++ +L
Sbjct: 405 DP--LSLYLADVNTVPVNLAGVP---SISVPCGFSDGLPIGLQIIGKHFNESTIL 454
>gi|241666612|ref|YP_002984696.1| hypothetical protein Rleg_6695 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862069|gb|ACS59734.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 456
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 181/424 (42%), Gaps = 64/424 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L G+ A KD+FD++G T G+ A+ A A V+A+L G ++G+T M E
Sbjct: 72 LDGIPIAWKDLFDMEGLPTTAGSVVLAKDMPAKRDAA--VVALLRQAGMVAVGRTNMSEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP D R+PGGSSSG+ V V A LV ++GTDTGGSVR+PA++
Sbjct: 130 AFSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG----------WFAWDPKILNRVGRVLLQLAD 194
GI G++ + + AGV P+A+S D++G W + L V L L
Sbjct: 190 NGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVRDAVWIDVAMRGLTAPDVVELPL-Q 248
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
+ L+ P ++F D G+V + E +L
Sbjct: 249 GLELIVPENIVF------------DGAEPGVVAAFEA---------------------AL 275
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRY------EFKNNHGDWVTTVKPD-LGPGIS 307
+ G K IP A L+ RY E H + + D + +
Sbjct: 276 ERLQKAGAKVARTVIP---AFDEIFELMTRYGPLVTAEAFALHRERLAGPDADRMDHRVV 332
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
R +T+ ++ L A + L+GD +L PTV P + E+F
Sbjct: 333 MRTRLGSKTTLPDYLAILDARSRLIADVERLVGDR-LLAFPTVAHVAPPIGPLEQDDELF 391
Query: 368 RARAFSLLSIAGVSGF---CQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTL 423
A L + F C VSIP G + +PV + L A D LL + +
Sbjct: 392 FATNNKTLRNTALGNFLDWCGVSIPCGTGEAGMPVGLLLSATTHRDEALLGIALAAEPII 451
Query: 424 KEEL 427
+++
Sbjct: 452 RDDF 455
>gi|424073501|ref|ZP_17810917.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407995981|gb|EKG36480.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 457
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 120/221 (54%), Gaps = 11/221 (4%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G RT+ S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRTNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPGSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
G+ GFR + S GV P+A + D+VG + + +L + +L+ P
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRSVRDALVIDDLLCARSKPSSLI-PRS 248
Query: 204 VIFAEDCLQLSSIPSDRVT----QGLVKSVEKL-FGGHIIE 239
+ L + + +RVT L+++VE L GG +IE
Sbjct: 249 LAGQRFLLDQAVLEDERVTPAVRDNLLRAVEALRAGGALIE 289
>gi|395652363|ref|ZP_10440213.1| enantiomer-selective amidase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 450
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 184/402 (45%), Gaps = 48/402 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ AIKD D HVT +G+ +A A V + GA +GKT+ E
Sbjct: 79 PLQGIPVAIKDNIDTFDHVTTYGSAHFAGCKP--EHDAVCVQRLREAGAVIVGKTLTHEF 136
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY G+ G NP + GGSS+GSA AV + +V +LGTDTGGS+R+PA+ CG
Sbjct: 137 AYGPTGDRSLQGAARNPWDATCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAALCG 196
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+PS ++V GV P+A S D VG A N + +D L+ +VI
Sbjct: 197 VVGFKPSFASVPLEGVFPLASSLDHVGPLA------NHI--------EDARLL--FEVIA 240
Query: 207 AEDCLQLSSIPSDRV---TQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
C + RV G +V+ + + + Q EG +
Sbjct: 241 GRRCAASTQARPLRVGWIASGSFGAVDAELDSQVYQ-------------AAQQLFGEGLQ 287
Query: 264 EQEYSIPSLAALSSAMR----LLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
++ LA LS+ M+ +LQR E N H + + + ER+ +
Sbjct: 288 ----TVDELALLSAEMKATLQVLQRAEAFNVHAERMQNAPQLFEDEVRERLELSGEVRGW 343
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVP--GPPPK---LQMDPSALEVFRARAFSL 374
+ QS + L+AA++ + + +LV P+VP P +Q+ ++V RA S
Sbjct: 344 QYIRAQSGQARLKAAIAQIFQRYDLLVSPSVPITATPVDARVVQIGAQDMDV-RAALLSH 402
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
S ++G +S+P+GL +PV + ++ G D LL L+
Sbjct: 403 TSAWNLTGLPAISLPVGLVRGMPVGLQVIGAAGEDDRLLTLM 444
>gi|83717410|ref|YP_440392.1| indole acetimide hydrolase [Burkholderia thailandensis E264]
gi|83651235|gb|ABC35299.1| indole-3-acetamide hydrolase-related protein [Burkholderia
thailandensis E264]
Length = 467
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 185/416 (44%), Gaps = 33/416 (7%)
Query: 21 SSAHQLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+S +LPL+G+ F IKD +F D G +P A AT A AV +L GA +G
Sbjct: 68 ASGRRLPLAGVPFVIKDNLFTSDMPTRG-ASP--ALLGFGATCNATAVQQLLDAGAVPLG 124
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
K M E+A+ I N H+G NP P R+ GGSS G+A AV A + F LGTDTGGSVR
Sbjct: 125 KANMHELAFGITSANGHFGAVRNPHDPARIAGGSSGGTASAVAAG-IPFGLGTDTGGSVR 183
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 184 IPAAFCGVAGLRPTPRRYSTHGVLALSPTRDTVGTIAHSIDDLLLLDAVLTGDATE---- 239
Query: 200 RPSQVIFAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
P+ V A + + P D + + + E+ L + +P L
Sbjct: 240 -PAPVALAGLRIGVPDAPYFDGLDPAVAEMTERALAA-------LTNAGARLIPLAARAL 291
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D I + +A +S
Sbjct: 292 HEADEACGFPIAGFEALAYWQRFSAERLDLP--FAEFVARLGSDDVRHIFRTLIDAPPSS 349
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV +S+ A D + +PTV P + + P A A
Sbjct: 350 DAYAAAIDVLRSIVRWYDQAFHRTGVD--CIALPTVQCEAPLVAASGHDLPPDAAYALFA 407
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
R A + G VS+P GL H +PV + L G+D LL + + L
Sbjct: 408 RVIRQTGPATLGGVPSVSVPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLL 463
>gi|72384146|ref|YP_293500.1| amidase [Ralstonia eutropha JMP134]
gi|72123489|gb|AAZ65643.1| Amidase [Ralstonia eutropha JMP134]
Length = 440
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 177/408 (43%), Gaps = 48/408 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNP--DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
PL+GL +IKD+FDV G VT G+ D + A + A GA IG+T M
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKVLDGSVPAPADAPAVARLRAA---GAVLIGRTNMS 125
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A+S G N H+GTP P R+ GGS+SG AV+V + +LGTDTGGS+R+P+++
Sbjct: 126 EFAFSGLGLNPHFGTPRTPFDASRIAGGSTSGGAVSVAEDMSVAALGTDTGGSIRIPSAF 185
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+P+ V G +P++ S D+ G A + VL D + + ++
Sbjct: 186 CGLTGFKPTARRVPLDGAVPLSTSLDSAGPLARSVGCCVAMDAVLSGEVLDTSPTKLREL 245
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHFLSEGNK 263
F + D V L VE+ F + + G + P L+
Sbjct: 246 RF--------YVTRDFVCDSLDPEVEQAFDAALAKLSAHGARIIPFDFPELRRL------ 291
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR-----TSA 318
I S L++A +HGD +RV + +R ++A
Sbjct: 292 ---PEINSGGGLTAAESWAWHRSLLASHGDQ-----------YDQRVAQRIRRGQKQSAA 337
Query: 319 QKIDVCQSVKT-ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL-- 375
ID+ + + + RAA+ LL D ++PTV PP+L + F L
Sbjct: 338 DYIDLLAARRAMQFRAAV--LLRDADAWLMPTVAVVPPRLDAVERDEDFFAVNGLVLRNP 395
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
S+ C VS+P G + + + A HG D +L + +
Sbjct: 396 SVINFLDGCAVSLPAGEG----IGLGVNALHGRDARVLQVAAAIERAF 439
>gi|390941775|ref|YP_006405536.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Belliella baltica DSM 15883]
gi|390415203|gb|AFL82781.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Belliella baltica DSM 15883]
Length = 476
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 186/425 (43%), Gaps = 49/425 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ IKD+ GH + R S TSTA V ++ A IG+ DE
Sbjct: 68 LAGMVIGIKDVLCYQGHTVNASSKILERFESQFTSTA--VQRLIDEDAIIIGRLNCDEFG 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ EN +G N RVPGGSS GSAVAV A L SLGTDTGGSVR PA++ G+
Sbjct: 126 MGSSNENSVHGKVLNAADESRVPGGSSGGSAVAVQANLCTVSLGTDTGGSVRQPAAFTGL 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++S VS G+I A SFDT+G F+ + V ++ D + V V
Sbjct: 186 VGIKPTYSRVSRWGLIAYASSFDTIGVFSKNVPDNALVMEIMAGSDDFDSTVSKKPVPHY 245
Query: 208 EDCLQLSSIPSDRVTQGLVK-SVEK-LFGGHIIENVILGDYVKDKVPSLQHFLSEGN-KE 264
+ L RV +K ++E I EN LG V D++ + H + E N
Sbjct: 246 SELLHFDK----RVKVAYLKETIESPALQAEIKENT-LG--VLDRLKNEGHQVDEVNFPL 298
Query: 265 QEYSIPSLAALSS--AMRLLQR-------YEFKNNHG---DWVTTVKPDLGPGISERV-- 310
+Y +P+ L++ A L R Y N H + T G + R+
Sbjct: 299 LKYILPTYYILTTAEASSNLSRFDGVKYGYRTPNAHNLESMYKMTRTEGFGEEVKRRIML 358
Query: 311 ---------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---Q 358
++A T AQK V+ ++ LL + +++PT P K
Sbjct: 359 GTFVLSASYYDAYFTKAQK------VRRLIKEFTEDLLNKYDYIIMPTTPSTAFKFGEHS 412
Query: 359 MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVE 417
DP A+ + F++ A VSG +SIP G+ LP+ + ++A + L
Sbjct: 413 NDPVAM--YLEDLFTVQ--ASVSGVPALSIPNGVDSKGLPIGLQIMANSFKEAELYAFAN 468
Query: 418 TLHNT 422
L+ T
Sbjct: 469 YLNTT 473
>gi|171059532|ref|YP_001791881.1| amidase [Leptothrix cholodnii SP-6]
gi|170776977|gb|ACB35116.1| Amidase [Leptothrix cholodnii SP-6]
Length = 413
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 177/412 (42%), Gaps = 42/412 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL +IKD+FDV G T G+ W A + APAV + GA +G+T M E A
Sbjct: 28 LCGLAVSIKDLFDVQGQPTRAGS-TWLGADQPARADAPAVARLRKAGAALVGRTQMTEFA 86
Query: 88 YSINGENKHYGTPTNPCA-----PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
+S G N H GTP N PD VPGGS+SG AV+V +LG+DTGGS+R+PA
Sbjct: 87 FSGVGINPHSGTPANAAMAALGRPDCVPGGSTSGGAVSVACGAAWAALGSDTGGSIRIPA 146
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ G+ G++ + + G +P+A S DTV + R R
Sbjct: 147 ALHGLVGYKNTQALTPLHGSVPLAPSMDTV-------CAVTRSVR--------------- 184
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG---DYVKDKVPSLQHFLS 259
D + L + + R +++ L G I + + G + + SL +
Sbjct: 185 ------DAVLLHQVLAQRRVALAGRTLSNLRLGWIRNHFLDGLDAEVAQAFEASLGTLAA 238
Query: 260 EGNKEQEYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
G + +E + +LA L + + E H + + P + R+ S
Sbjct: 239 AGVQLKELRVDALAELPALTEQGGITAAEAWAWHAPHLAAHGHEYDPRVLGRIRRGASIS 298
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFSLLS 376
A+++ + + A L D +++ PTVP P + + S E FR A L +
Sbjct: 299 AEQLAALHQRRRAWITRMEAALADVDLVLSPTVPLIAPAMAPLLASDDEFFRVNALLLRN 358
Query: 377 IAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
A V+ C +++P PV + L A G D LL+ + L+ +
Sbjct: 359 PAVVNLLDGCAITLPCHTQSQPPVGLMLWAPGGRDDLLLDAAGAVEAALQPQ 410
>gi|91783714|ref|YP_558920.1| Asp-tRNA Asn/Glu-tRNAGln amidotransferase A subunit [Burkholderia
xenovorans LB400]
gi|91687668|gb|ABE30868.1| Putative Asp-tRNA Asn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia xenovorans LB400]
Length = 374
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 173/383 (45%), Gaps = 39/383 (10%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
SG + AIKD D+ G+ T + A T A A V +L+ G +GKT M E+A+
Sbjct: 13 SGPSIAIKDTIDIAGYPTTAASRALADT-PPARRHAQVVERLLAAGWHIVGKTNMHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N + GTP NP R+PGGSSSGSA AVG KL D +LGTDTGGS+R PA+ CG+
Sbjct: 72 GMTGINDYTGTPQNPQDATRIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVI 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P+ VS GV P + D VG FA D ++L +L + D +
Sbjct: 132 GLKPTFGRVSRLGVAPRESTLDCVGPFARDMRML---AAAMLAITADFD----------- 177
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN-KEQEY 267
+ + G ++ D D + ++ N
Sbjct: 178 ------------------ANAAHAWQGPCKVGIVQADATADILAAVARAADTANCTAHTL 219
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+ LAA A + E G V K +G + R+ A T+A ++D + V
Sbjct: 220 QLTGLAAAFDAGLTVINAETSRAFGHLVAGGK--IGADLDARLRAAANTTAAQVDAAEQV 277
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ + AA+ L + +L++PT+P P L+ S V SL+ +SG +S
Sbjct: 278 RRQFTAAIDHALDNADVLILPTLPALPITLEEARSGKSVIAMS--SLIRPFNLSGHPALS 335
Query: 388 IPLGLHDN-LPVAISLLAKHGSD 409
+PL + + L + ++ + G D
Sbjct: 336 LPLPVEGSPLKAGLQIVGRKGHD 358
>gi|209963508|ref|YP_002296423.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Rhodospirillum
centenum SW]
gi|209956974|gb|ACI97610.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative
[Rhodospirillum centenum SW]
Length = 461
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH--SAATSTAPAVLAVLSGGATSIGKTIMD 84
PL+G T A+KD+FD+ G T G ART A +TA A+ +L G +GK
Sbjct: 65 PLAGRTLAVKDLFDLRGVPTAAG----ARTPVVDEAPATATALDHLLRAGMIPLGKAATV 120
Query: 85 EMAYSINGENKHYGTPTNP--CAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E+A+ G N+ GTP NP RVPGGSSSGSAVAV A L D +LG+DTGGS+R+P
Sbjct: 121 ELAFGTWGINRATGTPRNPWDMTVARVPGGSSSGSAVAVAAGLADMALGSDTGGSIRIPC 180
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
+ GI G + + VS AGV+P++ + DTVG AW
Sbjct: 181 ALNGISGIKTTVGRVSRAGVVPLSPTLDTVGPMAW 215
>gi|424878276|ref|ZP_18301916.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392520768|gb|EIW45497.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 456
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 181/424 (42%), Gaps = 64/424 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L G+ A KD+FD++G T G+ A+ A A V+A+L G ++G+T M E
Sbjct: 72 LDGIPIAWKDLFDMEGLPTTAGSVVLAKDMPAKRDAA--VVALLRQAGMVAVGRTNMSEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP D R+PGGSSSG+ V V A LV ++GTDTGGSVR+PA++
Sbjct: 130 AFSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG----------WFAWDPKILNRVGRVLLQLAD 194
GI G++ + + AGV P+A+S D++G W + L V L L
Sbjct: 190 NGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVRDGVWIDVAMRGLTAPDVVELPL-Q 248
Query: 195 DVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
+ L+ P ++F D G+V + E +L
Sbjct: 249 GLELIVPENIVF------------DGAEPGVVAAFEA---------------------AL 275
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRY------EFKNNHGDWVTTVKPD-LGPGIS 307
+ G K IP A L+ RY E H + + D + +
Sbjct: 276 ERLQKAGAKVARTVIP---AFDEIFELMTRYGPLVTAEAFALHRERLAGPDADRMDHRVV 332
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF 367
R +T+ ++ L A + L+GD +L PTV P + E+F
Sbjct: 333 MRTRLGSKTTLPDYLAILDARSRLIADVERLVGDR-LLAFPTVAHVAPPIGPLEQDDELF 391
Query: 368 RARAFSLLSIAGVSGF---CQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTL 423
A L + F C VSIP G + +PV + L A D LL + +
Sbjct: 392 FATNNKTLRNTALGNFLDWCGVSIPCGTGEAGMPVGLLLSATTHRDEALLGIALAAEPII 451
Query: 424 KEEL 427
+++
Sbjct: 452 RDDF 455
>gi|398942607|ref|ZP_10670411.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM41(2012)]
gi|398160505|gb|EJM48774.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM41(2012)]
Length = 451
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 180/401 (44%), Gaps = 46/401 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD D HVT +G+ +A + A V + GA +GKT+ E
Sbjct: 79 PLHGIPVAVKDNIDTFDHVTTYGSAHFAGFKP--SRDALCVQRLREAGAVIVGKTLTHEF 136
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY G+ G NP + GGSS+GSA AV + +V +LGTDTGGS+R+PA CG
Sbjct: 137 AYGPTGDRSLQGAARNPWDARCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAGLCG 196
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA---WDPKILNRV--GRVLLQLADDVNLVRP 201
+ GF+PS ++V GV P++ S D VG A D ++L V GRV +A+ RP
Sbjct: 197 VVGFKPSFASVPLEGVFPLSSSLDHVGPIANHVEDARLLFEVVAGRVCAPMANP----RP 252
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+V + +T G V+ + + + Q E
Sbjct: 253 LRVGW--------------ITTGSFGPVDAELDRQVYQ-------------AAQQLFGEA 285
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
++ +P A + + +LQR E + H + + + ER+ + +
Sbjct: 286 LQDAAELVPLAAEMKDTLLVLQRAEAFDVHAERMQDAPHTFEQEVRERLELSREVRGWQY 345
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV------FRARAFSLL 375
QS + L+AA++ L + LV P+V P +D + V RA S
Sbjct: 346 IRAQSSQVRLKAAMARLFEHYDFLVSPSV--PITATAVDAREVRVGEQDIDVRAALLSHT 403
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
S ++G +S+P+GL +PV + ++ G D LL ++
Sbjct: 404 SAWNLTGLPAISLPVGLLRGMPVGLQVIGAAGEDDRLLRVM 444
>gi|359397012|ref|ZP_09190062.1| Urea amidolyase [Halomonas boliviensis LC1]
gi|357968806|gb|EHJ91255.1| Urea amidolyase [Halomonas boliviensis LC1]
Length = 606
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 93/157 (59%), Gaps = 5/157 (3%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S LPL G+ FA+KD D+ G T G+P +A T T A V ++ GA +GKT
Sbjct: 63 SPQTLPLYGIPFAMKDNIDLAGIPTTAGSPAYAYT---PTENAFVVQQLIDAGAIPMGKT 119
Query: 82 IMDEMAYSINGEN--KHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
+D+ A + GE + YGTP N P VPGGSSSGSAV A +V F+LGTDT GS R
Sbjct: 120 NLDQFATGLVGERALEVYGTPANAFDPTLVPGGSSSGSAVVTAAGMVSFALGTDTAGSGR 179
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
VPA + ++G +PS +ST GV+P + DT+ FA
Sbjct: 180 VPACFHNLYGVKPSLGLLSTRGVVPACATLDTISLFA 216
>gi|113867520|ref|YP_726009.1| amidase [Ralstonia eutropha H16]
gi|113526296|emb|CAJ92641.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
Length = 451
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 172/389 (44%), Gaps = 36/389 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD++DV G VT + + + AT+ A V + + GA +G+T M E
Sbjct: 66 PLAGLPVSVKDLYDVAGEVTSAASL-VRKDAAPATADATVVARLRAAGAALVGRTNMTEF 124
Query: 87 AYSINGENKHYGTPTNPCAPD---RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A+S G N HYGTP NP D R+PGGSSSG+AV+V L +LG+DTGGS+R+PA+
Sbjct: 125 AFSGVGINPHYGTPANPAGTDGVARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPAA 184
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CGI GF+P+ V G P++ + DT A V V+ A + P+
Sbjct: 185 LCGITGFKPTARRVPLTGAFPLSYTLDTACAMARTVSDCIAVDSVIADSAVIPRVTNPAA 244
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
A IP + L V + F D+ +L + G +
Sbjct: 245 TRLA--------IPRQVLLDDLDPVVARAF---------------DR--ALGRLSAAGVQ 279
Query: 264 EQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
+ +P L L+ +A E H + + P ++ R+ SA
Sbjct: 280 LEHVDLPELGELAGLNAQGGFSSAEAFAIHRHLLAARRDLYDPRVASRIDRGANVSAADY 339
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFSLLSIAGV 380
+ + A + A L +V PTVP P++ + + FR A L + +
Sbjct: 340 IDLGRARLDWIARMEARLARFDAVVCPTVPMVAPEIAPLRTDDAQFFRVNALLLRNTSAF 399
Query: 381 SGF--CQVSIPLGLHDNLPVAISLLAKHG 407
+ C +S+P D LPV + L HG
Sbjct: 400 NFLDGCSISLPCHAPDELPVGLML--SHG 426
>gi|86136120|ref|ZP_01054699.1| amidase family protein [Roseobacter sp. MED193]
gi|85826994|gb|EAQ47190.1| amidase family protein [Roseobacter sp. MED193]
Length = 423
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 183/422 (43%), Gaps = 65/422 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G A+K D+ G + G+ + A S AP V + + G IG T M E
Sbjct: 48 PLDGQFLAVKANIDIQGLRSHSGSRLY--RPEPAQSDAPIVARMRAAGLIVIGHTNMSEF 105
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N H+GTP N D VPGGSSSGSA AV L D +LGTDT GSVR+PA+ G
Sbjct: 106 AFSGLGLNPHFGTPPNALRQDLVPGGSSSGSATAVALGLADLALGTDTSGSVRIPAACQG 165
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I GFRPS G+ P+A S DT G A + + + +L + D N P Q
Sbjct: 166 IIGFRPSIGRYDDIGIFPLAPSLDTPGPLARRVESIRSLDSLLTR---DRN---PGQNCK 219
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
CL S L DY + + ++ + E + E
Sbjct: 220 RIICLDEKS---------------------------LDDYAPE-IGAMYRIVVEQLADTE 251
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWV---------TTVKPD---LGPGISERVWEAV 314
+ + + + S R+ + + HG V V+ D L P + +R+ +
Sbjct: 252 FDL-EVRTIHSFARV---NDLFHTHGTLVGAEAYRLLKNVVQADHIALDPRVRDRLSHSA 307
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---MDPSALEVFRARA 371
S + + + + + A L G+L+ PT+P PPP +Q DP+ +F
Sbjct: 308 TISDENMRTLLAARRMMIETFEAEL-QGGMLLYPTLPSPPPSIQDVIGDPT---IFAREN 363
Query: 372 FSLLSIAGVSGFCQ---VSIPLGLHDNLP-VAISLLAKHGSDGFLLNLVETLHNTLKEEL 427
+LS++ + F +++P+G +P ++SL + G+D LL L +
Sbjct: 364 AHILSVSMKAAFLNAPTITLPVG--SGVPGCSLSLTSSTGADKDLLTTAVRLEPIFRAIC 421
Query: 428 QR 429
R
Sbjct: 422 DR 423
>gi|430810206|ref|ZP_19437321.1| amidase, partial [Cupriavidus sp. HMR-1]
gi|429497440|gb|EKZ95973.1| amidase, partial [Cupriavidus sp. HMR-1]
Length = 419
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 177/393 (45%), Gaps = 45/393 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA-ATSTAPAVLAVLSGGATSIGKTIMDE 85
PL+GL ++KD++D+ G VT + AR + AT+ A V + + GA +G+T M E
Sbjct: 35 PLAGLPVSVKDLYDIAGEVTRAAS--AARQDAVPATADATVVARLRAAGAALVGRTNMTE 92
Query: 86 MAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A+S G N H+GTP NPC + R+PGGSSSG+AV+V LG+DTGGS+R+PA+
Sbjct: 93 FAFSGVGINPHFGTPVNPCDSSVARIPGGSSSGAAVSVAIGTAVAGLGSDTGGSIRIPAA 152
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CGI GF+P+ V G P++ + DT A R L +++ +
Sbjct: 153 LCGIVGFKPTSRRVPLTGAFPLSYTLDTACAMA----------RTLTDCIAVDSVIADAP 202
Query: 204 VI---FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
VI A ++L +IP V L + V K F D+ ++ +
Sbjct: 203 VIPQMKAATAIRL-AIPRQLVLDDLDEPVSKAF---------------DR--AIGRLSAA 244
Query: 261 GNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
G + + +P L L+S A E +H + T + + R+ SA
Sbjct: 245 GVRIEHVDMPELTELASLNAAGGFSAPESYAHHRALLATHRDLYDRRVVTRIERGAAMSA 304
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVP--GPPPKLQMDPSALEVFRARAFSLLS 376
+ + A + A + +V PTVP PP ++ L FR L +
Sbjct: 305 ADYIALHRARLDWIARMEARMSPFDAVVCPTVPMVAPPIAPLVEDDTL-FFRTNGLLLRN 363
Query: 377 IAGVSGF--CQVSIPLGLHDNLPVAISLLAKHG 407
+ + C VS+P D LPV + L HG
Sbjct: 364 TSAFNFLDGCSVSLPCHAPDELPVGLML--SHG 394
>gi|229589499|ref|YP_002871618.1| hypothetical protein PFLU1992 [Pseudomonas fluorescens SBW25]
gi|229361365|emb|CAY48235.1| putative amidase [Pseudomonas fluorescens SBW25]
Length = 452
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 97/152 (63%), Gaps = 6/152 (3%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A KD++D+ G+VT G T A+ A AV A+ G SIGKT +
Sbjct: 61 PLSRFDGVPVAWKDLYDLAGYVTTAGAKVLLHTPPASHDCALAV-ALSRAGLVSIGKTNL 119
Query: 84 DEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
E+AYS G N H+GTP N + D RVPGGSSSGSA+AV +V ++ TDT GS+RVP
Sbjct: 120 SELAYSGLGLNPHFGTPVNAASKDEVRVPGGSSSGSAIAVARGIVPIAMSTDTAGSIRVP 179
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
A++ G+ G+R S S AGV+P+A++ D++G
Sbjct: 180 AAFNGLVGYRSSSRRYSFAGVMPLARTLDSLG 211
>gi|239820716|ref|YP_002947901.1| Amidase [Variovorax paradoxus S110]
gi|239805569|gb|ACS22635.1| Amidase [Variovorax paradoxus S110]
Length = 458
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 182/415 (43%), Gaps = 64/415 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+ ++ G T G+P + + A A V + G +GKT M +
Sbjct: 77 PLHGIPLALKDLVNIQGKPTTAGSPLL--SANIAQQDAAIVRRIADAGGVIVGKTHMVQF 134
Query: 87 AYSINGENKHYGTPTNPC--APDR-VPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A G N H GTP NP A D V GGSSSGSAVAV A LV +++G+DTGGSVRVPA+
Sbjct: 135 ALGAWGTNTHMGTPRNPAGRATDMLVAGGSSSGSAVAVAAHLVPWAIGSDTGGSVRVPAA 194
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+CGI GF+P+ A+ GV +++S D+VG A S
Sbjct: 195 FCGIVGFKPTIDALPREGVYALSESLDSVGLLA-------------------------SS 229
Query: 204 VIFAEDCLQ-LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY----VKDKVPSLQHFL 258
V A C + L+ P G + G ++E L + +V LQ
Sbjct: 230 VQDARLCFEALADAP------GSGADARRRIG--VLEADELAPLAPAVARCQVQCLQRLE 281
Query: 259 SEGNKEQEYSIP-SLAALSSAMRLLQRYEFKNNHGDWVTTV---KPD--LGPGISERVWE 312
G + P SLAA + E G WV PD + P + R+
Sbjct: 282 QAGFSLVPFRFPASLAAFKEPTNAIMIAE-----GAWVNDRFLDDPDAPMDPSVRSRLVA 336
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGI--LVIPTVPGPPPKLQ-MDPSALEVFRA 369
A T+A + Q+ + + + + G+ + +P P+L+ +D V
Sbjct: 337 ARATTAVQYLQAQATASRWQQEFAGDMDRLGLSAIAMPVTAMTAPRLEDVDHDVAPVHFT 396
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHDNL-PVAISLLAKHGSDGFLLNLVETLHNTL 423
R +LL++ C +S+P G D+ P+ + L+ + G D LL + + L
Sbjct: 397 RPVNLLAL------CGISLPAGEDDDARPIGLQLVGRAGCDHALLGVAADVAAAL 445
>gi|422618149|ref|ZP_16686848.1| hypothetical protein PSYJA_13642 [Pseudomonas syringae pv. japonica
str. M301072]
gi|330898528|gb|EGH29947.1| hypothetical protein PSYJA_13642 [Pseudomonas syringae pv. japonica
str. M301072]
Length = 414
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G RT S A AP V + G S+GKT + E
Sbjct: 29 PFDGVPIAWKDLFDVAGSVTTAGAA--VRTSLSPALLDAPTVGLLARSGMVSLGKTNLSE 86
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + RVPGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 87 FAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 146
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 147 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 176
>gi|86360596|ref|YP_472484.1| hypothetical protein RHE_PE00322 [Rhizobium etli CFN 42]
gi|86284698|gb|ABC93757.1| probable glutamyl-tRNA amidotransferase subunit A protein
[Rhizobium etli CFN 42]
Length = 456
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 177/413 (42%), Gaps = 78/413 (18%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS-GGATSIGKTIMDEM 86
L G+ A KD+FD++G T G+ A T A S A++ +L G +IG+T M E
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLAAT--APASCDAAIVGLLRRAGMVAIGRTNMSEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 130 AFSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA-------W---------DPKILNRVGRV 188
GI G++ + GV P+A+S D++G W P ++ R R
Sbjct: 190 NGIVGYKATSGRHVMDGVYPLAKSLDSLGPLCRSVRDAVWIDAAMRGLTAPDVIERPLRG 249
Query: 189 LLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
L L+ P V+F D G+V + E
Sbjct: 250 L-------ELLVPENVVF------------DAAEPGVVAAFEA----------------- 273
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
+L+ F S G IP A + + L+ RY + + GP +E
Sbjct: 274 ----ALERFQSAGASVSRTIIP---AFNEILDLMTRYGPLVTAEAFALHQERLAGPD-AE 325
Query: 309 RVWEAV--------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
R+ V RT+A + L + L+GD IL PTV P +
Sbjct: 326 RMDHRVVMRTRLGSRTTAPDYIAILEARRRLIGGVDRLVGDR-ILAFPTVAHVAPPIAPL 384
Query: 361 PSALEVFRA---RAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSD 409
E+F A R ++ +C SIP G ++ +PV + L A D
Sbjct: 385 EENDELFFATNNRTLRNTALGNFLDWCGASIPCGTGESGMPVGLLLSATASRD 437
>gi|424875055|ref|ZP_18298717.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393170756|gb|EJC70803.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 483
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 95/149 (63%), Gaps = 5/149 (3%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L G+ A KD+FD++G T G+ A+ A A V+A+L G ++G+T M E
Sbjct: 99 LDGIPIAWKDLFDIEGLPTTAGSVVLAKEMPAKCDAA--VVALLRQAGMVAVGRTNMSEF 156
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP NP D R+PGGSSSG+ V V A LV ++GTDTGGSVR+PA++
Sbjct: 157 AFSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAF 216
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
GI G++ + + AGV P+A+S D++G
Sbjct: 217 NGIVGYKATRGRHAMAGVYPLAKSLDSLG 245
>gi|374582242|ref|ZP_09655336.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Desulfosporosinus youngiae DSM 17734]
gi|374418324|gb|EHQ90759.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Desulfosporosinus youngiae DSM 17734]
Length = 496
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 180/431 (41%), Gaps = 46/431 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD +G T + + +T L + G +GK MDE
Sbjct: 72 PLEGIPMALKDNMCTEGIRTSCASKMLDNFYPPYNATVTERLRAV--GTILLGKLNMDEF 129
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN ++ NP + VPGGSS GSAVAV F+LG+DTGGS+R PA++CG
Sbjct: 130 AMGSSTENSYFAKTRNPWNLECVPGGSSGGSAVAVAGDEAAFTLGSDTGGSIRQPAAFCG 189
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLVRPS 202
+ G +P++ AVS G+I A S D +G F + ++N + + V P
Sbjct: 190 VVGMKPTYGAVSRLGLIAFASSLDQIGPFTKTVRDNALVMNAIAGHDPLDSTSVPYETPD 249
Query: 203 QVIF-AEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
F D L IP + +G+ V K I + LG V + SL H
Sbjct: 250 YTKFLVNDIKGLKIGIPREYFGEGIDPEVAKGIQAGIQTLIDLGAEVAE--CSLPH---- 303
Query: 261 GNKEQEYSIPS--LAALSSAMRLLQRYE-----FKNNHGDWVTTVKPDLGPGISERVWEA 313
EY+IP+ L A + A L RY+ ++ + D + K G + V
Sbjct: 304 ----TEYAIPAYYLIATAEASSNLARYDGVRYGYRADSNDVLGMFKKTRAEGFGQEVKRR 359
Query: 314 VRTSAQKIDV---------CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---QMDP 361
+ + Q V+T ++ +L+ PT P P K DP
Sbjct: 360 IMLGTYALSSGYYDAYYLKAQKVRTLIKEDFDKAFETFDVLLSPTAPTPAFKFGEKSADP 419
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL-- 419
A+ + + ++G +SIP G LP+ + L+ K +G L + T
Sbjct: 420 LAMYLSDITTVPI----NLAGIPAISIPAGFVKGLPIGMQLMGKPFGEGSLYRVAYTFEQ 475
Query: 420 ---HNTLKEEL 427
++TLK L
Sbjct: 476 NTNYHTLKPNL 486
>gi|334145296|ref|YP_004538506.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Novosphingobium sp. PP1Y]
gi|333937180|emb|CCA90539.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Novosphingobium sp. PP1Y]
Length = 490
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 188/405 (46%), Gaps = 33/405 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA K++FDV GH T R A TA + + + GAT +G T MDE
Sbjct: 93 PLAGMPFAAKNLFDVAGHPT-LAGARINRDAPPARRTATVISRLANAGATLVGMTNMDEF 151
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN H+G NPC R+ GGSS GSA AV A +V +LG+DT GS+RVPAS CG
Sbjct: 152 AYGFATENAHFGATRNPCDETRMAGGSSGGSAAAVAAGIVPVALGSDTNGSIRVPASLCG 211
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL--LQLADDVNLVRPSQV 204
I+G +P+ +S AG P S D VG FA + L+ + +Q AD + P+
Sbjct: 212 IYGLKPTFGRLSRAGTYPFVSSLDHVGPFA---RTLDDLALSYDAMQGADGAD---PACS 265
Query: 205 IFAEDCL--QLSSIPSD-RVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
D + +PSD RV + GG I + KD + + ++
Sbjct: 266 HTDPDPIAADFDVMPSDLRV---------GVLGGWFIRHA--AAEAKDALDLVAGVFAQA 314
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
++ + + A SA + E + H + T D P + +R+ + A+
Sbjct: 315 SRVE---LQGAQAARSAAFCMTGIEGGSLHIRQLATRPMDYDPAVRDRLLAGLLLPARVS 371
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRARAFSLLS 376
++ + ++ + ++ L G IL+ PT P P++ ++D L V RA
Sbjct: 372 ELARRMRRQFIDEVAQLFGSFHILISPTTPCSAPRIGEACVEIDGVELPV-RANLGLYTQ 430
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+G +S+PL D LP+ + L+A + ++ L + L
Sbjct: 431 PISFAGLPALSVPLKT-DGLPIGVQLIAPYWAEKRLFQVARWLER 474
>gi|124002668|ref|ZP_01687520.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microscilla marina
ATCC 23134]
gi|123991896|gb|EAY31283.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microscilla marina
ATCC 23134]
Length = 467
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 199/462 (43%), Gaps = 71/462 (15%)
Query: 4 RDSDYGAFMEKFVLQPSSSAHQL----------PLSGLTFAIKDIFDVDGHVTGFGNPDW 53
+ +D AF+E + + A + L+G+ IKD+ H +
Sbjct: 28 KKADLNAFLETYSDEARQQAQVVDQKIAENRAGKLAGMVIGIKDVLCYQNHSLQCSSKIL 87
Query: 54 ARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGS 113
S T+TA V +L+ IG+ DE A + EN +G N P VPGGS
Sbjct: 88 DGFESQFTATA--VQRLLNEDVIIIGRQNCDEFAMGSSNENSAFGVVRNAANPAHVPGGS 145
Query: 114 SSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
S GSAVAV A + SLG+DTGGSVR PA++CG+ G +PS+ +S G+ A SFD +G
Sbjct: 146 SGGSAVAVQADMCLVSLGSDTGGSVRQPAAFCGVVGLKPSYGRISRYGLAAYASSFDCIG 205
Query: 174 WFAWDPKILNRVGRVLL---------------QLADDVNLVRPSQVIFAEDCLQLSSIPS 218
F + + V ++ + + ++ R ++V + ++ L+ +
Sbjct: 206 IFGKNIADVALVLEIMAGADEFDTTVSKKSVPEYSKALSFDRKAKVAYLKETLESEGLHP 265
Query: 219 DRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSS 277
+ V Q +++ L GH +E+V P L + L Y I + A SS
Sbjct: 266 E-VKQATQATLDFLKTEGHTVESV--------DFPLLDYILP------TYYILTTAEASS 310
Query: 278 AMRLLQ--RYEFKNNHGD-----WVTTVKPDLGPGISERV-----------WEAVRTSAQ 319
+ RY F++ + + T G + R+ ++A T AQ
Sbjct: 311 NLSRYDGVRYGFRSTSAEDLQQMYTQTRTEGFGAEVKRRILLGTYVLSASYYDAYYTQAQ 370
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVFRARAFSLLSIA 378
K V+ ++ A L + +V+PT P ++ + + +E++ F++ A
Sbjct: 371 K------VRRLIKDATDKLFEQYDFIVLPTTPNTAFEVGAHNDNLVEMYLEDLFTVQ--A 422
Query: 379 GVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETL 419
V G +SIP G N LP+ + ++A + LL+ + L
Sbjct: 423 NVVGVPAISIPNGRATNGLPIGLQVMAATYQEDDLLSFSQYL 464
>gi|418518063|ref|ZP_13084216.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
gi|410705213|gb|EKQ63691.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
Length = 486
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 166/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R H S AV+ L GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H A+ GV P + D VG FA L V
Sbjct: 226 IYGLRPTHGALPLDGVFPFVDALDVVGPFATSVADLRCV--------------------- 264
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +PS + V + F ++ ++ G LQ L+ N
Sbjct: 265 -YDVLRGQPLPSCHAGKLRVARLGGWFQRNLDPDLEAG---------LQALLAACNSLAS 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 315 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 375 FAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|3618277|emb|CAA11194.1| hypothetical protein [Sphingomonas sp.]
Length = 452
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 181/402 (45%), Gaps = 29/402 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G ++K + DV G +T G+ R A S + V + S GA +G T M E A
Sbjct: 58 LDGALVSVKAMLDVQGLLTDAGSATL-RGRPPAASDSSVVSRLRSAGAVVVGTTQMTEFA 116
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N ++ NP +R+ GGSSSG+AV+VG L D ++G+DTGGS+R+PA+ CG+
Sbjct: 117 FSAVGTNPNFPALGNPHDAERICGGSSSGAAVSVGGGLADIAIGSDTGGSLRIPAALCGL 176
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ S V AG P++Q+ D++G A K L LAD V + + A
Sbjct: 177 VGFKPTASRVPAAGSFPLSQTLDSIGPIARSVK--------LCALADSVLATGKASDVAA 228
Query: 208 --EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
D +L + R+ +G ++V F G I+++ D V+ SL+ L E +
Sbjct: 229 IGVDRFRL-VVARGRLFEGCDQAVLDAFDGA-IDHLRRSD-VRISDGSLEPILDELARID 285
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
L++ +R +T + P + P R+ SA
Sbjct: 286 GLGTFPPVELAATLR-----------SSGITDLAP-VDPNTRSRIEAGSGLSAVDYLEMA 333
Query: 326 SVKTELRAALSALLGDHGILVIPTVP--GPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
++ +L + D + V+PTVP P DP A +A +
Sbjct: 334 RLRRQLADGFERSMEDGEVYVVPTVPIVAPTTWSVSDPEQFRRINALLLRNPRVANLLDC 393
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
+SIPL LPV + L+ + +D LL++ L L +
Sbjct: 394 PSISIPLPSR-GLPVGMMLIGRRNADRHLLSIALRLEGILAQ 434
>gi|192289986|ref|YP_001990591.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
gi|192283735|gb|ACF00116.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
Length = 607
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 177/399 (44%), Gaps = 23/399 (5%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV T P +A T S TA AV +L GA IGKT +D+
Sbjct: 70 PLWGIPFAVKDNIDVACLPTTAACPGFASTPS---ETAFAVQRLLDAGAVLIGKTNLDQF 126
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G Y P N P VPGGSSSGSAVAV LV F+LGTDT GS RVPA+
Sbjct: 127 ATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVAVAHGLVTFALGTDTAGSGRVPAALNN 186
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP-SQVI 205
I G +PS +VS+ G++P ++ DT+ FA + + R++ + V P S+
Sbjct: 187 IVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATF----DGVDPWSRPH 242
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A + P RV G+ +V + F G + V D + +
Sbjct: 243 PAAAANPPALPPGLRV--GVPDTVSRKFAGDLQSERAFDLAVADLATVVPAPARAVDLSP 300
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTSAQKIDVC 324
+ + L L S + +RY+ V P+ L P + + A SA
Sbjct: 301 LFEVADL--LYSGPWVAERYQAIRQ----VIETAPELLHPVTRKIIGSATAFSAADAFGG 354
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDPSALEVFRARAFSLLSIAGVSG 382
ELR A A+ +L++PT P P +L+ DP + + + +
Sbjct: 355 LYRLAELRRAADAIWSGIDVLIVPTYPRPRMVAELEADPIGPN---SELGTYTNFVNLLD 411
Query: 383 FCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
C +++P D P ++L+A G D L L E LH
Sbjct: 412 LCALAVPSRFRADGFPSGVTLIAPAGRDDLLAALGERLH 450
>gi|116696062|ref|YP_841638.1| amidase [Ralstonia eutropha H16]
gi|113530561|emb|CAJ96908.1| Amidase [Ralstonia eutropha H16]
Length = 451
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ F +K + DV GH T G A+ A A V A+++ GA + MDE
Sbjct: 69 PLAGVPFVVKSLLDVRGHATLAGAAPRAQ-EPPALRHADTVEALVAAGAVPVALAAMDEY 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A GEN G NP P R+ GGSS+G+A V A +V F LG+DT GS+R PA++CG
Sbjct: 128 ACGATGENVIGGPVRNPLDPSRITGGSSAGTAALVAAGVVPFGLGSDTNGSIRAPAAFCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
I+G RP+ +S AG +P AQS DTVG A
Sbjct: 188 IWGLRPTTGRLSLAGCVPYAQSLDTVGPMA 217
>gi|377820829|ref|YP_004977200.1| amidase [Burkholderia sp. YI23]
gi|357935664|gb|AET89223.1| amidase [Burkholderia sp. YI23]
Length = 380
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 190/415 (45%), Gaps = 42/415 (10%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+++F L S + P T AIKD D+ G+ T + A + + A AP V
Sbjct: 3 AFLQEFDLA-SHATDDAP----TIAIKDSIDIAGYPTTAASEALADS-APALRHAPVVQR 56
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L G GK M E+A+ + G N+ GTP NP P R+PGGSSSGSA AVG LVD +
Sbjct: 57 LLDAGWRISGKANMHELAFGMTGINEFSGTPVNPQDPARIPGGSSSGSASAVGLGLVDAA 116
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDTGGSVR PA+ CG+ G +P+ VS GV P S D VG FA D +N + V+
Sbjct: 117 LGTDTGGSVRCPAACCGVIGLKPTFGRVSREGVAPRQTSLDCVGPFARD---MNTIIDVM 173
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L + R + R GL ++ ++ I + + +
Sbjct: 174 LAIDPSFQGGR-----------------ARRDATGLRVALPEVEAAGEIRHAVAAAVARS 216
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
+ F S G + + A L+ + E G V + K LG I R
Sbjct: 217 R------FASRGVQLEFMRDAFTAGLA-----IINAETWRAFGHLVDSGK--LGADILAR 263
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA 369
+ A T ++D + ++ + + +L D +LV+PT+P P ++ + V
Sbjct: 264 LRTAANTQVSELDAAERIRRDFTNEVDHVLEDADVLVLPTMPSLPITIEAARAGTSVIAM 323
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
SL+ +SG +++P+ + +L + ++ + G D + + E + TL
Sbjct: 324 S--SLIRPFNLSGHPALTLPVPIEGTSLKAGLQIVGRKGEDETVCAVAERIEATL 376
>gi|254786061|ref|YP_003073490.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901]
gi|237685241|gb|ACR12505.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901]
Length = 463
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
++PL+G TFA+K++FD+ G VT G+ R HS A+ A + + + GA G M
Sbjct: 63 EMPLAGATFAVKNLFDIAGEVTLAGSKLNER-HSPASQDATLIERLENAGAILTGALNMG 121
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E AY GEN H+G NP D + GGSSSGSA AV A LVDFSLG+DT GS+RVPAS+
Sbjct: 122 EYAYDFTGENCHHGNCGNPYKLDHMAGGSSSGSAAAVAAGLVDFSLGSDTNGSIRVPASF 181
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
CGIFG +P++ + G P + S D +G A + L RV VL
Sbjct: 182 CGIFGLKPTYGRLPRTGTFPFSDSLDHLGPLARSTQDLARVYDVL 226
>gi|339325668|ref|YP_004685361.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338165825|gb|AEI76880.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 454
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 173/398 (43%), Gaps = 54/398 (13%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD++DV G VT + + + AT+ A V + + GA +G+T M E
Sbjct: 69 PLAGLPVSVKDLYDVAGEVTSAASL-VRKDAAPATADATVVARLRAAGAALVGRTNMTEF 127
Query: 87 AYSINGENKHYGTPTNPCAPD---RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A+S G N HYGTP NP D R+PGGSSSG+AV+V L +LG+DTGGS+R+PA+
Sbjct: 128 AFSGVGINPHYGTPVNPAGTDGVARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPAA 187
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CGI GF+P+ V G P++ + DT A
Sbjct: 188 LCGITGFKPTTRRVPLTGAFPLSYTLDTACAMART------------------------- 222
Query: 204 VIFAEDCLQLSSIPSD-----RVTQGLVKSVEKLFGGHIIENVILGDY----VKDKVPSL 254
DC+ + S+ +D RVT + I V+L D + +L
Sbjct: 223 ---VSDCIAMDSVIADSAVIPRVTNPAATRLA------IPRQVLLDDLDPVVARAFDRAL 273
Query: 255 QHFLSEGNKEQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
+ G + + +P L L+ +A E H + + P ++ R+
Sbjct: 274 GRLSAAGVQLEHVDLPELGELAGLNAQGGFSSAEAFAIHRHLLAGRRELYDPRVASRIDR 333
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARA 371
SA + + A + A L +V PTVP P++ + + FR A
Sbjct: 334 GANISAADYIDLGRARLDWIARMQARLARFDAVVCPTVPMVAPEIAPLRTDDAQFFRVNA 393
Query: 372 FSLLSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHG 407
L + + + C +S+P D LPV + L HG
Sbjct: 394 LLLRNTSAFNFLDGCSISMPCHAPDELPVGLML--SHG 429
>gi|383813397|ref|ZP_09968822.1| amidase [Serratia sp. M24T3]
gi|383297542|gb|EIC85851.1| amidase [Serratia sp. M24T3]
Length = 450
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 173/401 (43%), Gaps = 40/401 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL IKD+ G G+ S TA V + +GG +GKT + E
Sbjct: 72 PLQGLPIGIKDLLHWQGTPCSAGSNLLKGVIS--DETAEVVKRLHAGGMNIVGKTQLVEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+ G N + P NP R+PGGSSSGSAVAV A LV SLGTDTGGSVR+PA+
Sbjct: 130 AFGGWGTNPRFTAPWNPWDKKCHRIPGGSSSGSAVAVAAGLVPASLGTDTGGSVRIPAAL 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ G +P+ VS G IP++ + D++G K +L +L V L +P
Sbjct: 190 NGLVGLKPTQRRVSNQGCIPLSVNLDSIGPLTRTVKD----AALLFELMSGVTLAKP--- 242
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+V + V ++ G +E IL + K + Q + +
Sbjct: 243 ---------------QVGRMRVAILQGDMDGVAVEPEILQTFEKTQYDLRQCGIEVVTIK 287
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+S+P L+ LS + Y + H + P I ++ + TS+Q
Sbjct: 288 APFSLPELSRLSGEIITADAYAY---HCQDLQAHPESYDPVIFGKLMQGQSTSSQAYLCA 344
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPG---PPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ + + A + ++ D ++ PT+ P + +AL F R + L
Sbjct: 345 METRRQYQQAFATMMLDVDAILTPTLSMTAIPLSDVDEQKAALATF-TRGVNYLD----- 398
Query: 382 GFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHN 421
C +S+P+ L LP+ + L+A + LL L E L
Sbjct: 399 -GCAISLPVALSSAGLPIGMQLIAAAEGESTLLALAEALER 438
>gi|39934538|ref|NP_946814.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009]
gi|39648387|emb|CAE26908.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Rhodopseudomonas palustris CGA009]
Length = 601
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 177/412 (42%), Gaps = 50/412 (12%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ A+KD DV G T P +A + A AV + + GA IGKT +D+
Sbjct: 64 LPLYGVPVAVKDNIDVAGLPTTAACPAFAYQPA---RDATAVAKLRAAGAIVIGKTNLDQ 120
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG P N D VPGGSSSGSAVAVGA LV SLGTDT GS RVPA
Sbjct: 121 FATGLVGVRSPYGVPRNAMRSDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLN 180
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNLVRPSQ 203
I G +PS +ST GV+P ++ D V FA RV+ D + RP
Sbjct: 181 NIVGLKPSLGMISTTGVVPACRTLDCVSIFALTTDDAMTALRVMTGPDAEDPFSRERPVA 240
Query: 204 VIFA-EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+ A ++L P D++ + FG + + +L+ + G
Sbjct: 241 AVTAIPKRVRLGVPPQDQL---------QFFGDDLA--------ARGYQEALERWRKLGA 283
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT----TVKP--DLGPGISERVWEAVRT 316
+ E + L RLL YE G WV T++ + P V +
Sbjct: 284 ELVEIDVEP---LYETARLL--YE-----GPWVAERFLTIRELLETQPDAVHPVTRQITL 333
Query: 317 SAQKIDVCQSVKTELRAALSALLGDH---GI--LVIPTVPGPPPKLQM--DPSALEVFRA 369
+ K+ + R + +H GI LV+PT P Q+ DP L +
Sbjct: 334 AGAKLSAADTFAALYRLQALRKIAEHSFAGIDALVLPTAPTAYTVEQVLADPITLN---S 390
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
R + + + C +++P + D +P I+LLA G D L +L H
Sbjct: 391 RLGTYTNFVNLLDLCGLALPASIRSDGIPFGITLLAPAGRDAELASLGRVFH 442
>gi|209695179|ref|YP_002263108.1| amidase [Aliivibrio salmonicida LFI1238]
gi|208009131|emb|CAQ79370.1| putative amidase [Aliivibrio salmonicida LFI1238]
Length = 388
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 34/389 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L F + D D+ G GNP W A AP V +L GA +GKT MDE
Sbjct: 23 LENKKFVVSDCIDIKDTPNGLGNPVWLAQQKVAKDNAPVVDLLLKKGAIFVGKTQMDEFG 82
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ ++G N HY NP + R+ GGSS G+ AV L D LGTD G +RVPA Y G+
Sbjct: 83 FGLHGNNPHYAAIKNPNSEGRLIGGSSCGAIAAVANGLADIGLGTDLSGGIRVPAVYAGL 142
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+GF+ S A + GV +A+ ++GW A K L+ + +V L L+ +++
Sbjct: 143 YGFKSSSYAANMKGVYCIAKEETSLGWVA---KSLSDIRKVATTLTPMSPLMTVDRIVV- 198
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L S+ D + VK +E+L V+ + ++ ++ E
Sbjct: 199 -----LDSLFLDVPEEAKVK-LEQLLEASPYYKVV-------RSKAISKIITMKAAESFK 245
Query: 268 SIPSLAALSSAMRLLQRYE--FKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
I +A R L+ E + NH +K L +S ++ R + ++ D+ +
Sbjct: 246 VI-------TATRGLRNIEPWVEKNHPMLSNEIKMQL-KWLSSLKYKDERIALEQRDLVK 297
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
SV L +LL + +L++PT P L + S+A ++ Q
Sbjct: 298 SV-------LESLLDEKTLLLLPTTANIAPPETATDEQLYKLNSLILKYTSLASLADLPQ 350
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
+ +P +N P +SL+ K G D L++
Sbjct: 351 LHLPWFTVNNSPWGVSLIGKKGMDRQLID 379
>gi|386334432|ref|YP_006030603.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia
solanacearum Po82]
gi|334196882|gb|AEG70067.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia
solanacearum Po82]
Length = 448
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 185/413 (44%), Gaps = 53/413 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G V+ G+ A AT+ A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGSRALAH-QPPATADAVAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+PA++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G LA+ V+ + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGG-----------------PLANSVDCCAIVDAVLS 234
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++P + GL + + G +++ + + + ++ G + +
Sbjct: 235 GQALDTDAVPLAGLRLGLTRD----YVGADLDDTVATAFER----AVTRLEQAGARIVRF 286
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHG-----DWVTTVKPDLGPGISE---RVWEAVR---- 315
P LLQ E G W +P L ++ RV +R
Sbjct: 287 DFPE---------LLQLPEINGGGGLPAAESWAWH-RPHLARAEAQYDRRVAARIRRGEQ 336
Query: 316 -TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFS 373
T+A +DV + + + AA LG+ ++PTV PP++ ++ + FR A
Sbjct: 337 MTAAAYLDV-MAARARMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDTQFFRTNALV 395
Query: 374 LL--SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L S+ C +++P+ LPV +SL D +L + + L+
Sbjct: 396 LRNPSVINFLDGCALTLPIHAAGELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|302188198|ref|ZP_07264871.1| hypothetical protein Psyrps6_17715 [Pseudomonas syringae pv.
syringae 642]
Length = 457
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 180/411 (43%), Gaps = 42/411 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
G+ GFR + S GV P+A + D+VG VR +
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDAL 229
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
VI +D L S PS + + L L ++E+ + V+D + L G
Sbjct: 230 VI--DDLLCARSKPSSLIPRSLAGQ-RFLLDQAVLEDERVTPAVRDNLLRAVEALRSGGA 286
Query: 264 EQEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
E + A + + L Q+ F + + L P + +R+ A
Sbjct: 287 LIE--VKPCQAFQATLLLTQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKRLEAARSM 344
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP--GPPPKLQMDPSALEVFRARAFSL 374
A + + + L+ L+ L D +L+ PTV PP ++ L V A
Sbjct: 345 PASLLVNLYAARERLQEQLTLEL-DGALLITPTVAHVAPPLAPLLNDDDLFVQTNLATLR 403
Query: 375 LSIAG-VSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
L++ G + VS+P G LP + L A G D LL T+ + +
Sbjct: 404 LTMPGSLLNMPGVSLPCGRDASGLPTGLLLSAPAGEDARLLRAALTVESLI 454
>gi|422669252|ref|ZP_16729101.1| hypothetical protein PSYAP_24076 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330981610|gb|EGH79713.1| hypothetical protein PSYAP_24076 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 457
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G RT S A AP V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRTSLSPALLDAPTVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + RVPGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|398833070|ref|ZP_10591211.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit,
partial [Herbaspirillum sp. YR522]
gi|398222149|gb|EJN08535.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit,
partial [Herbaspirillum sp. YR522]
Length = 134
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 5 DSDYGAFME--KFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATS 62
D GAF+ +F + +S PL+GLTFA KD+FD+ G TG GNPDW RTH+ AT+
Sbjct: 16 DDRIGAFVPHGRFRINGASDG---PLAGLTFAAKDLFDICGRTTGAGNPDWLRTHAPATA 72
Query: 63 TAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVP 110
T+P V A+L+ GAT +GKT+ DE+AYSI+G+N HYGTP N AP RVP
Sbjct: 73 TSPVVEALLAAGATLVGKTLTDELAYSIHGDNHHYGTPLNSAAPQRVP 120
>gi|443642601|ref|ZP_21126451.1| Amidase superfamily protein [Pseudomonas syringae pv. syringae B64]
gi|443282618|gb|ELS41623.1| Amidase superfamily protein [Pseudomonas syringae pv. syringae B64]
Length = 457
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G RT S A AP V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRTSLSPALLDAPTVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + RVPGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|218768373|ref|YP_002342885.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis Z2491]
gi|385338205|ref|YP_005892078.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A)
[Neisseria meningitidis WUE 2594]
gi|433475114|ref|ZP_20432455.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 88050]
gi|433479754|ref|ZP_20437044.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63041]
gi|433513674|ref|ZP_20470464.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63049]
gi|433515883|ref|ZP_20472651.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2004090]
gi|433517747|ref|ZP_20474493.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 96023]
gi|433520129|ref|ZP_20476849.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 65014]
gi|433524114|ref|ZP_20480775.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97020]
gi|433528423|ref|ZP_20485032.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3652]
gi|433530624|ref|ZP_20487213.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3642]
gi|433532893|ref|ZP_20489456.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2007056]
gi|433534607|ref|ZP_20491147.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2001212]
gi|433541207|ref|ZP_20497659.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63006]
gi|24211723|sp|Q9JTZ5.1|GATA_NEIMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|121052381|emb|CAM08713.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis
Z2491]
gi|319410619|emb|CBY90988.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A)
[Neisseria meningitidis WUE 2594]
gi|432210932|gb|ELK66887.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 88050]
gi|432216093|gb|ELK71975.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63041]
gi|432247206|gb|ELL02645.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63049]
gi|432252809|gb|ELL08159.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2004090]
gi|432253483|gb|ELL08827.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 96023]
gi|432254851|gb|ELL10185.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 65014]
gi|432259358|gb|ELL14629.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97020]
gi|432265224|gb|ELL20420.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3652]
gi|432266716|gb|ELL21898.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2007056]
gi|432267131|gb|ELL22312.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3642]
gi|432271349|gb|ELL26474.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2001212]
gi|432277220|gb|ELL32269.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63006]
Length = 481
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 190/422 (45%), Gaps = 62/422 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGIPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQKLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF- 206
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL----SEGN 262
+D L D T+ L + ++ L G E G+ D + +LQ+ + ++G
Sbjct: 232 PKDSTSLEREKED-YTRDLNQPLKGLKIGLPKEYFGEGNSA-DVLTALQNTIDLLKAQGA 289
Query: 263 K-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPDLG 303
+ + + SIP+ L+SA L RY +F + + T G
Sbjct: 290 ELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFSDLEEMYGKTRAEGFG 349
Query: 304 PGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
+ R+ ++A AQK+ + V + + A + +++ PT P
Sbjct: 350 SEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVADDFQTAFARC----DLILAPTAPS 403
Query: 353 PPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGF 411
PK+ D S +E + + +++ ++G +++P G LP+ + L+ + S+
Sbjct: 404 AAPKIGADASPVETYLSDIYTI--AVNLAGLPALTLPAGFSSGGLPIGVQLIGNYFSEAK 461
Query: 412 LL 413
+L
Sbjct: 462 IL 463
>gi|416028865|ref|ZP_11571754.1| hypothetical protein PsgRace4_25331 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320327132|gb|EFW83146.1| hypothetical protein PsgRace4_25331 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 457
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVLIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV + V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|424069061|ref|ZP_17806509.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407995652|gb|EKG36171.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 457
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 91/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G RT+ S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRTNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPGSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|167744074|ref|ZP_02416848.1| indole acetimide hydrolase [Burkholderia pseudomallei 14]
Length = 442
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 43 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 100
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 101 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 159
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 160 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 214
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 215 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 266
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 267 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 324
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A A
Sbjct: 325 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFA 382
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 383 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 440
>gi|53716387|ref|YP_105169.1| indole acetimide hydrolase [Burkholderia mallei ATCC 23344]
gi|229008324|ref|YP_991153.2| indole acetimide hydrolase [Burkholderia mallei SAVP1]
gi|229778988|ref|YP_001025544.2| indole acetimide hydrolase [Burkholderia mallei NCTC 10229]
gi|386865950|ref|YP_006278898.1| indole acetimide hydrolase [Burkholderia pseudomallei 1026b]
gi|418538342|ref|ZP_13103959.1| indole acetimide hydrolase [Burkholderia pseudomallei 1026a]
gi|52422357|gb|AAU45927.1| indole-3-acetamide hydrolase-related protein [Burkholderia mallei
ATCC 23344]
gi|385348217|gb|EIF54848.1| indole acetimide hydrolase [Burkholderia pseudomallei 1026a]
gi|385663078|gb|AFI70500.1| indole acetimide hydrolase [Burkholderia pseudomallei 1026b]
Length = 467
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 68 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 125
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 126 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 184
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 185 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 239
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 240 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 291
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 292 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 349
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A A
Sbjct: 350 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFA 407
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 408 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 465
>gi|296534637|ref|ZP_06897042.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957]
gi|296265025|gb|EFH11245.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957]
Length = 449
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G T P +A A A AV ++ GA + KT +D+
Sbjct: 68 PLWGIPFAVKDNIDVAGMPTSAACPAFA---YAPDRDAGAVQRLVEAGAIPMAKTNLDQF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G + P NP AP RVPGGSSSGSAVAV L+ FSLGTDT GS R+PA CG
Sbjct: 125 ATGLVGVRTPHPVPRNPRAPGRVPGGSSSGSAVAVARGLLPFSLGTDTAGSGRIPAGLCG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF 175
+ G +P+ AVS+ GV+P +S D V F
Sbjct: 185 LVGLKPTPGAVSSRGVVPACRSLDCVSLF 213
>gi|121225509|gb|ABM49040.1| indole-3-acetamide hydrolase-related protein [Burkholderia mallei
SAVP1]
gi|261826709|gb|ABN00057.2| indole-3-acetamide hydrolase-related protein [Burkholderia mallei
NCTC 10229]
Length = 548
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 185/416 (44%), Gaps = 33/416 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 149 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 206
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 207 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 265
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 266 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 320
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 321 PAPVALA--GLRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 372
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 373 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 430
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A A
Sbjct: 431 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFA 488
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 489 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLL 544
>gi|255505923|ref|ZP_05348905.3| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bryantella
formatexigens DSM 14469]
gi|255265092|gb|EET58297.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Marvinbryantia formatexigens DSM 14469]
Length = 498
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 188/426 (44%), Gaps = 49/426 (11%)
Query: 9 GAFMEKFVLQPSSSAHQL--PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
GA + +Q A +L PL+G+ AIKD G +T + + T TA A
Sbjct: 58 GALKQAEEVQKKIEAGELTGPLAGVPAAIKDNMCTKGLLTTCSS--RILENFVPTYTAQA 115
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V + + G +GKT MDE A E YG NP P+ VPGGSS GS AV A
Sbjct: 116 VENLEAAGVVVLGKTNMDEFAMGSTTETSAYGVTRNPWNPEHVPGGSSGGSCAAVAANEC 175
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
F+LG+DTGGS+R P+S+CG+ G +P++ VS G+I S D +G A D +
Sbjct: 176 SFALGSDTGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVSDCAAIL 235
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH----IIENVI 242
V+ + S I +DC S++ D +G+ + + + G ++ I
Sbjct: 236 EVIASWDR-----KDSTSIKRDDCDFTSALTDD--VKGMKIGIPRDYLGSGLDVEVKQAI 288
Query: 243 L--GDYVKDKVPSLQHF---LSEGNKEQEYSIPSLAALSSAMRL------LQRYEFKNNH 291
L + +++K ++ F L E Y+I S A S+ R + E++ H
Sbjct: 289 LAAAEVLREKGAEVEEFDLSLVEYAIPAYYTIASAEASSNLSRFDGIKYGYRAKEYEGLH 348
Query: 292 GDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLG 340
+ + GP + R+ ++A A + K ++ A
Sbjct: 349 QMYKKSRSEGFGPEVKRRIMLGSFVLSSGYYDAYYLKALR------TKALIKQAFDRAFA 402
Query: 341 DHGILVIPTVPGPPPKLQMDPSA-LEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDN-LP 397
+ +++ P P PKL S L+++ +++ ++AG+ G +S+P G LP
Sbjct: 403 KYDVILGPAAPATAPKLGESLSNPLQMYLGDIYTISANLAGIPG---ISVPCGRDSKGLP 459
Query: 398 VAISLL 403
+ + LL
Sbjct: 460 IGLQLL 465
>gi|416014913|ref|ZP_11562630.1| hypothetical protein PsgB076_06135 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320325581|gb|EFW81643.1| hypothetical protein PsgB076_06135 [Pseudomonas syringae pv.
glycinea str. B076]
Length = 459
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 74 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 131
Query: 86 MAYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV + V ++GTDT GS+RVPA+
Sbjct: 132 FAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAA 191
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 192 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 221
>gi|306845188|ref|ZP_07477764.1| amidase [Brucella inopinata BO1]
gi|306274347|gb|EFM56154.1| amidase [Brucella inopinata BO1]
Length = 445
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G +IKD+FDV G T G+ R A AP V + + GA IGKT M E
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGSV-VRRDAPLAGCDAPIVQRLRNAGAVIIGKTHMTEF 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+ G
Sbjct: 111 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVG 173
+ GF+P+ + G P+A S D+VG
Sbjct: 171 LVGFKPTARRIPLEGAFPLAPSLDSVG 197
>gi|262192883|ref|YP_001077612.3| indole acetimide hydrolase [Burkholderia mallei NCTC 10247]
gi|126238882|gb|ABO01994.1| indole-3-acetamide hydrolase-related protein [Burkholderia mallei
NCTC 10247]
Length = 454
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 55 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 112
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 113 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 171
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 172 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 226
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 227 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 278
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 279 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 336
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A A
Sbjct: 337 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFA 394
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 395 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 452
>gi|320333783|ref|YP_004170494.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus
maricopensis DSM 21211]
gi|319755072|gb|ADV66829.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus
maricopensis DSM 21211]
Length = 483
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
LPL+G+ IKD ++ G T G+ S T+TA V + + GA IGK M
Sbjct: 62 EHLPLAGVPVVIKDNLNLQGTHTTCGSRALGGYVSPYTATA--VQRLRAAGAVIIGKANM 119
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + E+ +G NP P RVPGGSS GSAVAV + +V SLG+DTGGSVR PA+
Sbjct: 120 DEFAMGSSTESGAFGRARNPWDPARVPGGSSGGSAVAVASGMVPLSLGSDTGGSVRQPAA 179
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+ G++GF+P++ VS G++ A S D VG FA + L V V+
Sbjct: 180 FTGVYGFKPTYGRVSRYGLVAYASSLDQVGPFARHAEDLATVMDVI 225
>gi|261403819|ref|YP_003248043.1| aspartyl/glutamyl-tRNA amidotransferase subunit A
[Methanocaldococcus vulcanius M7]
gi|261370812|gb|ACX73561.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
vulcanius M7]
Length = 434
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 195/417 (46%), Gaps = 49/417 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ A + PL G +K +VDG+ + + A A V + G
Sbjct: 38 LEKDEKAKKKPLYGKVVVVKANINVDGYTISCASKTLE--NYIAPYDATVVQKIKENGGL 95
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG MDE A +GE +YG NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 96 IIGIANMDEFACGSSGETSYYGATKNPKAEDRIPGGSSSGSAAAVSADLCDLALGSDTGG 155
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G L + A+D
Sbjct: 156 SIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGP--------------LTKTAEDA 201
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV-ILGDYVKDKVP-SL 254
L+ + +I +D +++ + + K ++ G I E + ++ ++DK+ S+
Sbjct: 202 LLL--TNIIKGKDLKDTTTVETKPFEK---KDIKGFKVGVIKEFMDVVDKKIRDKIETSI 256
Query: 255 QHFLSEGNKEQE-------------YSIPSLAALSSAMRLLQR---YEFKNNHGDWVTTV 298
+ F G + E Y I + SS R R Y+ ++ G+ V
Sbjct: 257 EVFKDIGCEIVELNYKYVDLALPTYYLINYVEFFSSTRRYDGRRYGYKIEDVCGEEVLR- 315
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
+ +G IS++ + S + + +R + ++ D I+V TVP P KL
Sbjct: 316 RIMIGSMISQKEY-----SGKYYKNALRARNLMRNEMIKIMKDVDIIVGATVPKLPHKLG 370
Query: 359 MDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
+ +E++ ++ +L++ A + G C +P G + +P+ + + K D +LN
Sbjct: 371 EKLTPMEMY---SYDVLTVPANICGLCAGVVPCGEINGIPIGLQIQGKPFDDEKVLN 424
>gi|254444029|ref|ZP_05057505.1| Amidase, putative [Verrucomicrobiae bacterium DG1235]
gi|198258337|gb|EDY82645.1| Amidase, putative [Verrucomicrobiae bacterium DG1235]
Length = 431
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 177/400 (44%), Gaps = 42/400 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG+ F +KD+FD G+ T + T A A + GA GKT ++E A
Sbjct: 65 LSGVPFLLKDLFDFPGYPTTASSLFLTDVRPKPTREAALSKAFRAQGAVFAGKTHLNEFA 124
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y ++GEN +G +P P+R+ GGSSSGSA AV + +V + GTDTGGS+RVP ++CGI
Sbjct: 125 YGLSGENPTFGNCPHPIYPERLSGGSSSGSAWAVRSGIVPIATGTDTGGSIRVPTAWCGI 184
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R S + S+ G P+A SFDT GWF A+D+ L
Sbjct: 185 YGLRLSPNEWSSKGCFPLAPSFDTAGWFC--------------STAEDMRL--------- 221
Query: 208 EDCLQLSSIPSDRVTQGL--VKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
C++ P T L V +E + I GD ++ + + S+ + +
Sbjct: 222 --CIETLLSPKRGKTSPLRGVSLLESVKDLSIEFRAKSGDVLE-----ILNAQSDPSVTE 274
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
Y + + +++ + +LQ E H W+ K P + +R+ A + +ID +
Sbjct: 275 AYRV-TTRSITQSYSILQSLEALQVHKAWIDAHKKRYDPVVWQRIDRARHWTPAQIDDAK 333
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQ 385
+ + A + +V+P P SA E +LL+I F +
Sbjct: 334 KTEARIIDFFQACFERYDFIVLPATQSP------AISAAEHTDEFRTNLLAITAPGSFAR 387
Query: 386 ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
++IP+ L + + +L K L ++ L T
Sbjct: 388 CPVLTIPIQLKNGESQGLQILCKEDQSDIPLRILNALGGT 427
>gi|192290373|ref|YP_001990978.1| amidase [Rhodopseudomonas palustris TIE-1]
gi|192284122|gb|ACF00503.1| Amidase [Rhodopseudomonas palustris TIE-1]
Length = 449
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 182/413 (44%), Gaps = 35/413 (8%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+S A P +G+ +IKD+FD+ G VT G+ + A S APAV + G IG
Sbjct: 63 ASKAAPSPFAGIPISIKDLFDIKGQVTRAGSRAL-DDNPPADSDAPAVARLRRAGFVVIG 121
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
+T M E AYS G N HYGTP D VPGGSSSG+AV+V + LGTDTGGS
Sbjct: 122 RTNMTEFAYSGIGINPHYGTPKAAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGS 181
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
R+PA++ GI G++PS V G +P++ S D++G A + + +L
Sbjct: 182 CRIPAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARGVECCATLDAILADQPVGPL 241
Query: 198 LVRP--SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG-GHIIENVILGDYVKDKVPSL 254
+VRP I + L + + VT ++++ L G IIE + +VP
Sbjct: 242 IVRPLKGMRIAVPTTVALDDLDA-AVTAAFERALKTLASHGAIIEKI--------EVPEF 292
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA- 313
G K + S A RY GD P + ER+
Sbjct: 293 AEVGPLGAKGGFAAAESYA--------WHRY-LIVAQGDVYD-------PRVRERILRGE 336
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFS 373
+++A +D+ + K+ L A SA L + + +PT P + +A +
Sbjct: 337 TQSAADYVDLVNARKS-LIARASARLAPYDAVAMPTTAIAAPTIAELADDKAFTKANLLT 395
Query: 374 LLSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L + ++ C +S+P P+ + L +G+D + + + ++
Sbjct: 396 LRNCTLINMIDGCAISLPCHQDGEPPIGLMLAGVNGTDREIFEVAAGMEAVIR 448
>gi|402573445|ref|YP_006622788.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Desulfosporosinus meridiei DSM 13257]
gi|402254642|gb|AFQ44917.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Desulfosporosinus meridiei DSM 13257]
Length = 496
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 185/441 (41%), Gaps = 62/441 (14%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD +G T + + +T L + G +GK MDE
Sbjct: 72 PLEGIPMALKDNMCTEGIRTSCASKMLENFYPPYNATVTERLR--AAGTILLGKLNMDEF 129
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN + NP + VPGGSS GSAVAV F+LG+DTGGS+R PA++CG
Sbjct: 130 AMGSSTENSFFTKTRNPWNLECVPGGSSGGSAVAVAGDEAAFTLGSDTGGSIRQPAAFCG 189
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G +P++ AVS G+I A S D +G F + D LV I
Sbjct: 190 VVGMKPTYGAVSRLGLIAFASSLDQIGPFT--------------KTVRDNALVM--NAIA 233
Query: 207 AEDCLQLSSIPSDR--VTQGLVKSVEKL--------FGGHIIENVILGDYVKDKVPSLQH 256
D L +S+P + T+ LV ++ L FG I V G ++ + +L
Sbjct: 234 GHDPLDSTSVPIEAPDYTKFLVNDIKGLKIGIPREYFGAGIDPEVAKG--IQAGIQTLID 291
Query: 257 FLSEGNK----EQEYSIPS--LAALSSAMRLLQRYE-----FKNNHGDWVTTVKPDLGPG 305
+E + EY+IP+ L A + A L RY+ ++ + D + K G
Sbjct: 292 LGAEVAECTLPHTEYAIPAYYLIATAEASSNLARYDGVRYGYRADADDVLGMFKKTRAEG 351
Query: 306 ISERVWEAVRTSAQKIDV---------CQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
+ V + + Q V+T ++ +L+ PT P K
Sbjct: 352 FGQEVKRRIMLGTYALSSGYYDAYYLKAQKVRTLIKQDFDKAFEKFDVLLSPTAPTAAFK 411
Query: 357 L---QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
DP A+ + + ++G +SIP GL + LP+ + L+ K +G L
Sbjct: 412 FGEKSADPLAMYLSDITTVPI----NLAGIPAISIPAGLVNGLPIGMQLMGKAFGEGSLY 467
Query: 414 NLVETL-----HNTLKEELQR 429
+ T ++TLK L R
Sbjct: 468 RVAYTFEQNTNYHTLKPNLSR 488
>gi|238563909|ref|ZP_00438056.2| indole acetimide hydrolase [Burkholderia mallei GB8 horse 4]
gi|238519708|gb|EEP83176.1| indole acetimide hydrolase [Burkholderia mallei GB8 horse 4]
Length = 505
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 106 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 163
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 164 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 222
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 223 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 277
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 278 PAPVALA--GLRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 329
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 330 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 387
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A A
Sbjct: 388 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFA 445
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 446 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 503
>gi|440722768|ref|ZP_20903142.1| hypothetical protein A979_18090 [Pseudomonas syringae BRIP34876]
gi|440725660|ref|ZP_20905924.1| hypothetical protein A987_06417 [Pseudomonas syringae BRIP34881]
gi|440360689|gb|ELP97948.1| hypothetical protein A979_18090 [Pseudomonas syringae BRIP34876]
gi|440368455|gb|ELQ05491.1| hypothetical protein A987_06417 [Pseudomonas syringae BRIP34881]
Length = 457
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G RT S A AP V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA--VRTSLSPALLDAPTVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + RVPGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|192290050|ref|YP_001990655.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
gi|192283799|gb|ACF00180.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
Length = 601
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 169/418 (40%), Gaps = 62/418 (14%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ A+KD DV G T P +A + A AV + + GA IGKT +D+
Sbjct: 64 LPLYGVPVAVKDNIDVAGLTTTAACPAFAYQPA---HDATAVAKLRAAGAIVIGKTNLDQ 120
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG P N D VPGGSSSGSAVAVGA LV SLGTDT GS RVPA
Sbjct: 121 FATGLVGVRSPYGVPRNAMRSDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLN 180
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNLVRPSQ 203
I G +PS +ST GV+P ++ D V FA RV+ D + RP
Sbjct: 181 NIVGLKPSLGMISTTGVVPACRTLDCVSIFALTTDDAMTALRVMTGPDAEDPFSRERPVA 240
Query: 204 VIFA-----------EDCLQLSSIPSDRVTQGLVKSVEKL--FGGHIIENVILGDYVKDK 250
+ A +D LQ D +G ++VE+ G ++E + Y
Sbjct: 241 AVTAIPKRVRLGVPPQDQLQFFG--DDLAARGYEEAVERWRKLGAELVEIDVEPLY---- 294
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
L EG E R L E D V V
Sbjct: 295 --ETARLLYEGPWVAE-------------RYLTIRELLETQPDAV------------HPV 327
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDH---GI--LVIPTVPGPPPKLQM--DPSA 363
+ + K+ + R + +H GI LV+PT P Q+ DP
Sbjct: 328 TRQITLAGAKLSAADTFAALYRLQALRKIAEHSFAGIDALVLPTAPTAYTVEQVLTDPIT 387
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
L +R + + + C +++P + D +P I+LLA G D L L H
Sbjct: 388 LN---SRLGTYTNFVNLLDLCGLALPASIRSDGIPFGITLLAPAGRDAELAGLGRVFH 442
>gi|71733453|ref|YP_276071.1| hypothetical protein PSPPH_3935 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|422598745|ref|ZP_16673001.1| hypothetical protein PLA107_28625 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|71554006|gb|AAZ33217.1| amidase family protein [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298156763|gb|EFH97854.1| predicted amidase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330989018|gb|EGH87121.1| hypothetical protein PLA107_28625 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 457
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV + V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|345304336|ref|YP_004826238.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
SG0.5JP17-172]
gi|345113569|gb|AEN74401.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
SG0.5JP17-172]
Length = 491
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 186/440 (42%), Gaps = 70/440 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL A+KD+ + G+ S +T A L GA IGK DE
Sbjct: 68 PLGGLVLAVKDVICIKDQRVTCGSRMLENFVSLYDATVIARLR--EAGAIFIGKANCDEF 125
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + E ++G NP PD VPGGSS GSAVAV A++ +LG+DTGGS+R PA++CG
Sbjct: 126 AMGSSNETSYFGPARNPINPDYVPGGSSGGSAVAVAARMCQAALGSDTGGSIRQPAAFCG 185
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P++ VS G++ A SFDT+G + R+ +V+ + + P +V
Sbjct: 186 IVGLKPTYGRVSRYGLVAYASSFDTIGPMTHTIEDAARLLQVIAGVDRWDSTSAPVEVPD 245
Query: 207 AEDCLQLS------SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
+ L +P + +GL ++ + +G V++ SL H
Sbjct: 246 YLEALDQPIKGLRIGLPREYFAEGLDPEFRQVLEERAAQLEAVGAVVQEV--SLPH---- 299
Query: 261 GNKEQEYSIPS--LAALSSAMRLLQRY----------------EFKNNHGD-------WV 295
EY I + + A + A L RY E + D +V
Sbjct: 300 ----TEYGIATYYILATAEASSNLARYDGIRYGYRADVQQIRRELAESDSDDSVIYRLYV 355
Query: 296 TTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGI 344
+ G + R+ +EA AQ+ V+ +R +
Sbjct: 356 RSRSEGFGTEVKRRIMLGTYVLSAGYYEAYYAKAQR------VRRLIRQDFDRAFEQVDV 409
Query: 345 LVIPTVPGPPPKLQ---MDPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDN-LPVA 399
L+ P P PP L DP LE++ + +++ + +AG+ G +P+G H + PV
Sbjct: 410 LLTPASPTPPFPLGSKLSDP--LEMYLSDIYTVTANLAGIPGLV---VPVGTHSSGFPVG 464
Query: 400 ISLLAKHGSDGFLLNLVETL 419
LL +H + LL + L
Sbjct: 465 AQLLGRHFDEATLLRVGRAL 484
>gi|254184470|ref|ZP_04891059.1| amidase family protein [Burkholderia pseudomallei 1655]
gi|184215062|gb|EDU12043.1| amidase family protein [Burkholderia pseudomallei 1655]
Length = 467
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 188/426 (44%), Gaps = 49/426 (11%)
Query: 21 SSAHQLPLSGLTFAIKD-IFDVD-------GHVTGFGNPDWARTHSAATSTAPAVLAVLS 72
+S +LPL+G+ F IKD +F D + GFG AT A AV +L+
Sbjct: 68 ASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFG----------ATRNATAVQQLLN 117
Query: 73 GGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGT 132
GA +GK M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGT
Sbjct: 118 AGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGT 176
Query: 133 DTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL 192
DTGGSVR+PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL
Sbjct: 177 DTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGD 236
Query: 193 ADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDK 250
A + P+ V A L++ +P GL +V +L E + L D
Sbjct: 237 AGE-----PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARL 283
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISER 309
+P H L E ++ + I AL+ R +R + ++V + D +
Sbjct: 284 IPLAAHALHEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRM 341
Query: 310 VWEAVRTS---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDP 361
+ +A +S A IDV QS A D + +PTV P + +
Sbjct: 342 LIDAPPSSDAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPS 399
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETL 419
A R A + G VSIP GL H +PV + L G+D LL + +
Sbjct: 400 DAAYALFTRVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREV 459
Query: 420 HNTLKE 425
L
Sbjct: 460 ERLLAR 465
>gi|187924147|ref|YP_001895789.1| amidase [Burkholderia phytofirmans PsJN]
gi|187715341|gb|ACD16565.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 374
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 176/382 (46%), Gaps = 37/382 (9%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G + AIKD D+ G+ T + A T A A V +++ G +GK M E+A+
Sbjct: 13 AGPSIAIKDTIDIAGYATTAASRALADT-PPAQQHAEVVERLIASGWHIVGKANMHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N + GTP NP R+PGGSSSGSA AVG KL D +LGTDTGGS+R PA+ CG+
Sbjct: 72 GMTGINDYTGTPQNPQDAARIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVI 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
G +P+ VS GV P + D VG FA D ++L V A VN + +
Sbjct: 132 GLKPTFGRVSRLGVAPRESTLDCVGPFARDMRML-----VAAMQAIAVNFDANTAHAWQG 186
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
C G+V++ E V DK + H L
Sbjct: 187 AC-----------KVGIVQAEAAA------EIVEAVTRAADKASCVAHTL---------P 220
Query: 269 IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVK 328
+ LAA A + E G V + K LG + R+ A T+A ++D + V+
Sbjct: 221 LAGLAAAFDAGLTVINVETSRAFGHLVASGK--LGADLDARLRAAANTTAAQLDAAEQVR 278
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSI 388
+ AA+ L + +L++PT+P P L+ S V SL+ +SG +S+
Sbjct: 279 RDFTAAVDHALDNVDVLILPTLPALPITLEQARSGTSVIAMS--SLIRPFNLSGHPALSL 336
Query: 389 PLGLHDN-LPVAISLLAKHGSD 409
PL + + L + ++ + G D
Sbjct: 337 PLPISGSPLKAGLQIVGRKGQD 358
>gi|424919835|ref|ZP_18343198.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392848850|gb|EJB01372.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 456
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 173/402 (43%), Gaps = 44/402 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ + A A V + G +IG+T M E A
Sbjct: 72 LDGIPIAWKDLFDIEGLATTAGSVVLG-ADAPAKRDAAVVALLRQAGMIAIGRTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-QLADDVNLVRPSQV 204
GI G++ + + GV P+A+S D++G + + + ++A DV + RP Q
Sbjct: 191 GIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRSVRDAVWIDAAMRGRIAPDV-VERPPQG 249
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ D L +I D G++ + E L+ G
Sbjct: 250 L---DLLVPENIVFDGAEPGVIAAFEA---------------------GLERLQRAGVHV 285
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
IP+ A+ L+ RY F +H + + R RTS
Sbjct: 286 ARAVIPAFDAI---FDLMTRYGPLVTAEAFALHHERLAGPDADRMDHRVVMRTRLGSRTS 342
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
+ + A + L+GD +L PTV P + E+F A L
Sbjct: 343 LADYLAILEARKRMIADVERLVGDR-LLAFPTVAHVAPPIGPLEGDDELFFATNNKTLRN 401
Query: 378 AGVSGF---CQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNL 415
+ F C VSIP G +PV + L A D LL +
Sbjct: 402 TALGNFLDWCGVSIPCGTGASGMPVGLLLSATARRDETLLGV 443
>gi|381173060|ref|ZP_09882170.1| amidohydrolase, AtzE family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686492|emb|CCG38657.1| amidohydrolase, AtzE family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 486
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 166/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL-SGGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R + S AV+ L GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAYCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A LV F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G RP+H AV GV P + D VG FA L V
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCV--------------------- 264
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +PS + V + F ++ ++ G LQ L+ N
Sbjct: 265 -YDVLRGQPLPSCHAGKLRVARLGGWFQRNLDPDLEAG---------LQALLAACNSLAS 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H +T P +R+ ++ A +
Sbjct: 315 IDLPEAERARAAAFVLTAAEGGHRHRSALTAHGAQFDPATRDRLLAGLQLPASAVADAHR 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ AL +L+ P P P++ D ++ A + L I G++
Sbjct: 375 FAQWFADAMHALWDQVDVLIAPATPCVAPRIDQDTIQIDGLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|289628158|ref|ZP_06461112.1| hypothetical protein PsyrpaN_24013 [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649876|ref|ZP_06481219.1| hypothetical protein Psyrpa2_19319 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422585889|ref|ZP_16660945.1| hypothetical protein PSYAE_29038 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871226|gb|EGH05935.1| hypothetical protein PSYAE_29038 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 457
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV + V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|304321845|ref|YP_003855488.1| amidase [Parvularcula bermudensis HTCC2503]
gi|303300747|gb|ADM10346.1| amidase [Parvularcula bermudensis HTCC2503]
Length = 517
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 98/166 (59%), Gaps = 7/166 (4%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA---PAVLAVLSGGATSIGKTIM 83
PL+G+ +A+KD+F V G T G A++ A A A+ + GA IG T+M
Sbjct: 133 PLAGVPYAVKDLFGVAGEPTTAG----AQSRETAPPEADDCEAIRRLGDAGAILIGSTMM 188
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE AY N HYGT NP A DR+ GGSS GSA AV A LV F+LG+DT GSVRVPAS
Sbjct: 189 DEYAYGFVTVNSHYGTTKNPHALDRLAGGSSGGSAAAVAAGLVPFALGSDTNGSVRVPAS 248
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
CG+FG RPSH + T GV P S DTVG FA L V VL
Sbjct: 249 LCGVFGLRPSHGDIPTEGVFPFVPSLDTVGAFARSAADLALVHAVL 294
>gi|260949973|ref|XP_002619283.1| hypothetical protein CLUG_00442 [Clavispora lusitaniae ATCC 42720]
gi|238846855|gb|EEQ36319.1| hypothetical protein CLUG_00442 [Clavispora lusitaniae ATCC 42720]
Length = 1864
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 189/427 (44%), Gaps = 41/427 (9%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
LQ S LPL G+ A+KD DV G T P +A + T A V + S GA
Sbjct: 113 LQSHSDKTSLPLYGVPVAVKDNIDVKGMETTAACPSFAYS---PTEDATTVRLLRSAGAI 169
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IGKT +D+ A + G YG N V GGSS+GSA V +V SLGTDT G
Sbjct: 170 VIGKTNLDQFATGLVGTRSPYGITPNTFDSRYVCGGSSAGSASVVARGIVPLSLGTDTAG 229
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S RVPA+ + G +P+ S AGV+P +S D V FA + + +L Q AD
Sbjct: 230 SGRVPAALNNLIGLKPTKGVFSAAGVVPACKSLDCVSVFAQNLQDAQMAFNILAQ-ADG- 287
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV----EKLFGGHIIENVILGDYVKDKVP 252
A D + P+ R+T G V E ++ G EN L +
Sbjct: 288 ----------AHDAYSRAMPPNARLTFGPSARVAVPKELVWCGE-EENPALFER------ 330
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMR----LLQRYEFKNNHGDWVTTVKP--DLGPGI 306
++ H S G++ I L L+ + + +RY +++ + P DL P +
Sbjct: 331 AVSHVASTGSEISSIDIGPLLDLAKCLYEGPWVAERYWAAR---EFLASNPPEKDLDPTV 387
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDPSAL 364
+ + + SA + + + + LL + +LV+PT P P ++Q DP +
Sbjct: 388 ARIIRGGEKYSAADAFGFEYKRQAILQKVRPLLENVDVLVLPTAPLTPTIEQVQKDPIGV 447
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ + +++A +S +++P G D +P I+ L++ +D LL+ E
Sbjct: 448 NSCQGTYTNFVNLADLSA---LAVPAGFRKDGVPFGITFLSQAYNDYALLDFAEKYMKAY 504
Query: 424 KEELQRM 430
E+ R+
Sbjct: 505 TAEIPRL 511
>gi|146276040|ref|YP_001166200.1| amidase [Novosphingobium aromaticivorans DSM 12444]
gi|145322731|gb|ABP64674.1| Amidase [Novosphingobium aromaticivorans DSM 12444]
Length = 408
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Query: 31 LTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI-GKTIMDEMAYS 89
L AIKD D+ G T G+ A A + A V +LS I GK M E AY
Sbjct: 39 LRVAIKDCIDIAGWQTRQGSAVLADVPPA-IANAEVVTCILSDPRWRIIGKARMHEFAYG 97
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
++G N GTP NP PDR+PGGSSSGSAVAV + L D ++GTDTGGSVR+PA+ CG+ G
Sbjct: 98 VSGLNPACGTPINPFWPDRIPGGSSSGSAVAVASGLADVAIGTDTGGSVRMPAACCGVIG 157
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFA 176
F+P+ VS G P S D +G FA
Sbjct: 158 FKPTFGLVSRRGAHPAKSSLDCIGIFA 184
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
P +G + R+ A + + + + V+ R + A L LV+PT+P PP L
Sbjct: 272 PGMGDDVRTRLMRASALTDEDLGAAEDVRAAFRDGVDAALEGVDALVLPTLPVVPPLLSE 331
Query: 360 DPSALEVF----RARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFL 412
A + R F+L SG +++PL +PV++ L+ +HG D L
Sbjct: 332 AEDAAALLPLTRLVRPFNL------SGHPAIALPLRAAHGVPVSLQLVGRHGGDAAL 382
>gi|260905667|ref|ZP_05913989.1| Amidase [Brevibacterium linens BL2]
Length = 434
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGN-----PDWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
L G+ FA+KD+ DV G T G+ PD +++AP V + GA + KT
Sbjct: 49 LEGIPFAVKDVIDVAGFPTTMGSNVSSGPD-------PSASAPVVSLLERAGALPVVKTN 101
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E +Y I G+ +G NP P GGSSSGSA V A +V +LGTDT GSVRVPA
Sbjct: 102 CQEYSYGILGDESAFGRVINPVDPALCTGGSSSGSAALVAAGVVPLALGTDTAGSVRVPA 161
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+ G+ GF+P+ VS GV P++ SFDTVG FA D +L RV+
Sbjct: 162 ACQGVIGFKPTFGTVSAEGVFPLSPSFDTVGLFARDLPLLTAAFRVI 208
>gi|121602953|ref|YP_980282.1| allophanate hydrolase [Polaromonas naphthalenivorans CJ2]
gi|120591922|gb|ABM35361.1| Ankyrin [Polaromonas naphthalenivorans CJ2]
Length = 600
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ FAIKD D+ G T G PD+A T A +A V +L GA +IGKT +D+
Sbjct: 67 LPLWGIPFAIKDNIDLAGVPTTAGCPDYAYTPEA---SATVVQRLLDAGAIAIGKTNLDQ 123
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A +NG YG N PD V GGSS+GSAV+V FSLGTDT GS RVPA +
Sbjct: 124 FATGLNGTRSPYGACRNAFNPDYVSGGSSAGSAVSVALGHASFSLGTDTAGSGRVPAGFN 183
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+ G +PS +ST GV+P +S D V FA
Sbjct: 184 HLVGLKPSLGLLSTQGVVPACRSLDVVSIFA 214
>gi|284175642|ref|ZP_06389611.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
solfataricus 98/2]
gi|384434387|ref|YP_005643745.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
solfataricus 98/2]
gi|261602541|gb|ACX92144.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
solfataricus 98/2]
Length = 474
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 194/432 (44%), Gaps = 81/432 (18%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ AIKD +G T + D+ + A + + GA IGKT MD
Sbjct: 60 LAGVLIAIKDNISTEGIRTTCASKMLEDYIPPYDATV-----IEKLKKEGAVIIGKTNMD 114
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A V+ +LG+DTGGS+R PA+Y
Sbjct: 115 EFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAY 174
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL----QLADDVNL-- 198
IFG +PS+ VS G++ A S + +G A + + L + ++ + A +NL
Sbjct: 175 NAIFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDERDATTINLNL 234
Query: 199 --------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
V+ ++ D L++S P V + +V + G +IE+ LG+
Sbjct: 235 NFELKERSVKNVRIGVLSDILEMSEKPVSGVIKDVVNKLSS--EGALIEDTKLGN----- 287
Query: 251 VPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKPDL 302
EY++P+ + A+S A L RY+ K G+W +
Sbjct: 288 --------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEGNWREVYAKNR 333
Query: 303 GPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVI 347
G + R+ +E A K V+ ++ L L + IL+
Sbjct: 334 GEAFGMEVKRRILLGSFILSAGYYEEFYLKALK------VRNLIKKNLDELFKKYDILLS 387
Query: 348 PTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLL 403
PT+P PPK+ DP R A L + IA ++ +S+P+G + +LP+ + L+
Sbjct: 388 PTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSMPVGFYSDLPIGLQLM 442
Query: 404 AKHGSDGFLLNL 415
K+ SD +L+N+
Sbjct: 443 GKYLSDIYLINI 454
>gi|228993428|ref|YP_001063986.2| indole acetimide hydrolase [Burkholderia pseudomallei 668]
gi|283775140|gb|ABN86235.2| amidase family protein [Burkholderia pseudomallei 668]
Length = 467
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 181/417 (43%), Gaps = 31/417 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 68 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 125
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 126 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 184
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 185 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 239
Query: 201 PSQVIFAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
P+ V A + + P D + + + E+ F L D +P H L
Sbjct: 240 PAPVALAGLRVGVPDAPYFDGLDPAVAELTERAFAA-------LTDAGARLIPLAAHALH 292
Query: 260 EGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS- 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 293 EADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSSD 350
Query: 318 --AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRAR 370
A IDV QS A D + +PTV P + + A R
Sbjct: 351 AYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFTR 408
Query: 371 AFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 409 VIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 465
>gi|206900742|ref|YP_002250888.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dictyoglomus
thermophilum H-6-12]
gi|206739845|gb|ACI18903.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dictyoglomus
thermophilum H-6-12]
Length = 483
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 189/435 (43%), Gaps = 52/435 (11%)
Query: 12 MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 71
+EK V + S + LPL G+ AIKD T + + A V +
Sbjct: 47 IEKQVKELESKSPNLPLYGIPIAIKDNILTKNIKTTCASK--ILENFIPPYDATVVKRLK 104
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLG 131
GA IGKT +DE A + EN +G NP +RVPGGSS GSA V A V SLG
Sbjct: 105 ENGAIIIGKTNLDEFAMGSSCENSAFGPTKNPWDIERVPGGSSGGSAACVSAGEVPVSLG 164
Query: 132 TDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 191
+DTGGS+R+PAS+ G+ G +P++ VS G++ A S D +G F GR +
Sbjct: 165 SDTGGSIRLPASFTGVIGLKPTYGLVSRFGLVAFASSLDQIGPF----------GRTVED 214
Query: 192 LADDVNLVRPSQVIFAEDCLQLSSIPSD--RVTQGLVKSVEKLFGGHIIENVILG---DY 246
+A + Q+I D + +S P + +GL KSV+ G E G +
Sbjct: 215 IAITL------QIIAGHDPMDSTSSPYEIPNYLEGLGKSVKNWRVGIPKELWYKGVSEEV 268
Query: 247 VKDKVPSLQHFLSEGNKEQEYSIPSLA---------ALSSAMRLLQRYE-FKNNHGDW-- 294
+K S F G +E S+PSL + S A L RY+ K + D+
Sbjct: 269 LKTLENSFDVFKEMGVTIEEISLPSLEYALPVYYIISTSEASSNLARYDGVKYGYRDFTA 328
Query: 295 ---VTTVKPDLGPGISERVWEAV-----RTSAQKIDV----CQSVKTELRAALSALLGDH 342
++ K G G V + SA D V+ +R
Sbjct: 329 EDIISMYKQTRGKGFGSEVKRRIILGTYALSAGYYDAYYLKATKVRRLIRMEFEEAFKKV 388
Query: 343 GILVIPTVPGPPPKL-QMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAI 400
I+ PT P P KL + L+++ ++ +++AG+ +S+P G ++NLPV I
Sbjct: 389 DIIASPTSPVLPFKLGERISDPLQMYLTDIMTIPVNLAGIPA---ISMPAGFYNNLPVGI 445
Query: 401 SLLAKHGSDGFLLNL 415
++ ++ LL
Sbjct: 446 QFMSSFFTEDKLLQF 460
>gi|167908035|ref|ZP_02495240.1| indole acetimide hydrolase [Burkholderia pseudomallei NCTC 13177]
Length = 447
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 187/426 (43%), Gaps = 49/426 (11%)
Query: 21 SSAHQLPLSGLTFAIKD-IFDVD-------GHVTGFGNPDWARTHSAATSTAPAVLAVLS 72
+S +LPL+G+ F IKD +F D + GFG AT A AV +L
Sbjct: 48 ASGRRLPLAGVPFVIKDNLFTADMPTRAASPALLGFG----------ATRNATAVQQLLD 97
Query: 73 GGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGT 132
GA +GK M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGT
Sbjct: 98 AGAVPLGKANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGT 156
Query: 133 DTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL 192
DTGGSVR+PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL
Sbjct: 157 DTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGD 216
Query: 193 ADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDK 250
A + P+ V A L++ +P GL +V +L E + L D
Sbjct: 217 AGE-----PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARL 263
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISER 309
+P H L E ++ + I AL+ R +R + ++V + D +
Sbjct: 264 IPLAAHALHEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRM 321
Query: 310 VWEAVRTS---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDP 361
+ +A +S A IDV QS A D + +PTV P + +
Sbjct: 322 LIDAPPSSDAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPS 379
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETL 419
A R A + G VSIP GL H +PV + L G+D LL + +
Sbjct: 380 DAAYALFTRVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREV 439
Query: 420 HNTLKE 425
L
Sbjct: 440 ERLLAR 445
>gi|330808987|ref|YP_004353449.1| amidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|327377095|gb|AEA68445.1| putative amidase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 458
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
QP+S+ L G+ A KD+FDV G T G R + A A V + G S
Sbjct: 69 QPASA-----LDGVPVAWKDMFDVAGSPTTAGAA-VRRDITPALLDANVVGLLAKAGMVS 122
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTG 135
+GKT + E AYS G N H+GTP NP D R+PGGSSSGSAVAV A +V ++GTDT
Sbjct: 123 VGKTNLSEFAYSGLGLNPHFGTPHNPVGLDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTA 182
Query: 136 GSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
GS+R+PA++ G+ GFR S S GV P+A + D+VG
Sbjct: 183 GSIRIPAAFNGLVGFRSSCRRYSREGVFPLAHTLDSVG 220
>gi|417956737|ref|ZP_12599689.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri ATCC
51223]
gi|343970384|gb|EGV38562.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri ATCC
51223]
Length = 484
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 187/432 (43%), Gaps = 67/432 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L+ G ++G+T MDE A
Sbjct: 68 LTGVPIAFKDIFCQQGWRSACSSKMLDNFVSPYTATV--VQNLLNEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
E YG NP + VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNETSFYGATKNPWNVENVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGVVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMASFD 231
Query: 208 E-DCLQLSSIPSDRVT------QGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
E D L D +GL + K + G + D K ++ ++
Sbjct: 232 ERDSTSLERAKEDYTRDLNQPLKGLKVGLPKEYFGEGMS----ADVQKTVQTAIDLLKAQ 287
Query: 261 GNK-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPD 301
G + + E SIP+ L+SA L RY +F N + T
Sbjct: 288 GAEMVEVSLPQTELSIPAYYVLASAEASTNLSRYDGVRYGHRAEQFGNLEELYSNTRAEG 347
Query: 302 LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
G + R+ ++A AQK+ + V + + AL I++ PT
Sbjct: 348 FGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVANDFQTALQQC----DIILAPTA 401
Query: 351 PGPPPKLQMDPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGS 408
P PKL D + ++++ + +++ ++G +++P G D LP+ + L+ + +
Sbjct: 402 PTAAPKLGSDINDPVQMYLSDIYTI--AVNLAGLPAMTLPAGFSSDGLPIGVQLIGNYFA 459
Query: 409 DGFLLNLVETLH 420
+ LL + +
Sbjct: 460 EAKLLGVAHQMQ 471
>gi|291528242|emb|CBK93828.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Eubacterium rectale M104/1]
Length = 503
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 206/465 (44%), Gaps = 77/465 (16%)
Query: 9 GAFMEKFVLQPSSSAHQLP--LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
GA + +Q A +L L+G+ AIKD +G +T + + T TA A
Sbjct: 50 GALKKAAEVQAKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKIL--YNFIPTYTAEA 107
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V + G +GKT MDE A E +G NP + VPGGSS GS AV A+ V
Sbjct: 108 VKRLEDAGCVIVGKTNMDEFAMGSTTETSAFGATKNPWNTEHVPGGSSGGSCAAVAAEEV 167
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
F+LG+DTGGS+R P+S+CG+ G +P++ VS G+I S D +G A D
Sbjct: 168 PFALGSDTGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKD-------- 219
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSD--RVTQGLVKSVEKLFGGHIIENVILG 244
+ D ++ + I + D +S+ D + T+ LV V+ + G I LG
Sbjct: 220 -----VTDCATIL---EAIASYDTKDSTSVNRDDLKFTEALVDDVKGMKIG--IPKDYLG 269
Query: 245 DYVKDKVPSLQHFLSEGNKEQ------------EYSIPS--LAALSSAMRLLQRY----- 285
D + +V S ++ K++ EY+IP+ + A + A L R+
Sbjct: 270 DGLDPEVKSAILAAADELKKKGAVVEEFDLGLVEYAIPAYYVIACAEASSNLARFDGVKY 329
Query: 286 -----EFKNNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKT 329
E+ + H + + GP + R+ ++A A + VK
Sbjct: 330 GYRTKEYTDLHNMYKKSRSEGFGPEVKRRIMLGSFVLSSGYYDAYYLKALR------VKA 383
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQ---MDPSALEVFRARAFSL-LSIAGVSGFCQ 385
++ A + +++ P P PKL DP ++++ +++ +++AG+ G
Sbjct: 384 LIKKAFDDAFAKYDVILGPAAPTTAPKLGESLSDP--IQMYLGDIYTISVNLAGLPG--- 438
Query: 386 VSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNTLKEELQR 429
+S+P G+ N LP+ + L+ + ++ + T EL+R
Sbjct: 439 ISLPCGMDKNGLPIGLQLIGDCFKEKNIIRAAYSFEKT--RELKR 481
>gi|409440848|ref|ZP_11267843.1| Amidase [Rhizobium mesoamericanum STM3625]
gi|408747143|emb|CCM79038.1| Amidase [Rhizobium mesoamericanum STM3625]
Length = 454
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 183/410 (44%), Gaps = 38/410 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD+ G T G+ A + A + A V + G SIG T M E A
Sbjct: 72 LDGIPIAWKDLFDIKGRTTTAGSTVLA-SGPVAQADATVVATLEQAGMVSIGCTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ V V A LV ++GTDTGGSVR+PA+
Sbjct: 131 FSGLGINPHYGTPHNPRSSDVPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAALN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ-V 204
GI G++ + GV P+A+S D++G L R Q
Sbjct: 191 GIVGYKATWGRYPMTGVYPLAKSLDSLG-----------------------PLTRTVQDA 227
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
++ + ++ +++PS + +K ++ + +++ + V ++ +EG
Sbjct: 228 VWIDAGMRGAAVPS--IVARPLKGLDIVIPDNVVLDGAEAGVVAAFETAVDWLAAEGASI 285
Query: 265 QEYSIPS----LAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+ IP+ LA +++ L+ F + D+ + R+ +TS
Sbjct: 286 SRFRIPAFDEILALMATYGALVTAEAFALHRERLSGPQAADMDHRVVMRIKLGEKTSLSN 345
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+ +L A + L+GD + PTV P + + ++F A L +
Sbjct: 346 YLAILDAREKLIADVERLVGDS-FVAFPTVAHVAPPIAPLEANDDLFFATNGKTLRNTML 404
Query: 381 SGF---CQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
F C VSIP G D ++PV L A D LL+ + ++ E
Sbjct: 405 GNFLDWCGVSIPCGTGDADMPVGFLLSAMRKRDEALLSAALSAEAVIRGE 454
>gi|402486979|ref|ZP_10833806.1| hypothetical protein RCCGE510_04727 [Rhizobium sp. CCGE 510]
gi|401814071|gb|EJT06406.1| hypothetical protein RCCGE510_04727 [Rhizobium sp. CCGE 510]
Length = 460
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 92/148 (62%), Gaps = 3/148 (2%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FDV+G T G+ A A A V + G +IG+T M E A
Sbjct: 72 LDGIPIAWKDLFDVEGLPTTAGSVVLA-DEKPAKRDAAVVDLLRQAGMVAIGRTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP + D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA+
Sbjct: 131 FSGLGINPHYGTPVNPRSNDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAALN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
GI G++ + + AGV P+A+S D++G
Sbjct: 191 GIIGYKATRGRHAMAGVYPLAKSLDSLG 218
>gi|15897836|ref|NP_342441.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
solfataricus P2]
gi|23821629|sp|Q97ZG1.1|GATA_SULSO RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|13814137|gb|AAK41231.1| Glutamyl-tRNA amidotransferase, subunit A (gatA-2) [Sulfolobus
solfataricus P2]
Length = 478
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 194/432 (44%), Gaps = 81/432 (18%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ AIKD +G T + D+ + A + + GA IGKT MD
Sbjct: 64 LAGVLIAIKDNISTEGIRTTCASKMLEDYIPPYDATV-----IEKLKKEGAVIIGKTNMD 118
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A V+ +LG+DTGGS+R PA+Y
Sbjct: 119 EFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAY 178
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL----QLADDVNL-- 198
IFG +PS+ VS G++ A S + +G A + + L + ++ + A +NL
Sbjct: 179 NAIFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDERDATTINLNL 238
Query: 199 --------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
V+ ++ D L++S P V + +V + G +IE+ LG+
Sbjct: 239 NFELKERSVKNVRIGVLSDILEMSEKPVSGVIKDVVNKLSS--EGALIEDTKLGN----- 291
Query: 251 VPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKPDL 302
EY++P+ + A+S A L RY+ K G+W +
Sbjct: 292 --------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEGNWREVYAKNR 337
Query: 303 GPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVI 347
G + R+ +E A K V+ ++ L L + IL+
Sbjct: 338 GEAFGMEVKRRILLGSFILSAGYYEEFYLKALK------VRNLIKKNLDELFKKYDILLS 391
Query: 348 PTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLL 403
PT+P PPK+ DP R A L + IA ++ +S+P+G + +LP+ + L+
Sbjct: 392 PTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSMPVGFYSDLPIGLQLM 446
Query: 404 AKHGSDGFLLNL 415
K+ SD +L+N+
Sbjct: 447 GKYLSDIYLINI 458
>gi|407974857|ref|ZP_11155765.1| amidase [Nitratireductor indicus C115]
gi|407429940|gb|EKF42616.1| amidase [Nitratireductor indicus C115]
Length = 474
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 181/400 (45%), Gaps = 41/400 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+ L FA KD+F GH+ G G P R S AP + + + GA +G T +D +
Sbjct: 106 LANLPFAFKDVFFAHGHLPGDGTP--YRFPSRGVEQAPLLERLFAAGAIPVGATNLDPFS 163
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
YS GEN YG P NP P+ + GGSSSGS+VAVGA +V F++GTDTGGS+R+PA++CG+
Sbjct: 164 YSTTGENPFYGAPINPLDPELLVGGSSSGSSVAVGAGIVPFAIGTDTGGSIRIPAAFCGV 223
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G++P++ + +G++P++ S D A D ++L RV A
Sbjct: 224 WGWKPTNGLLDASGLVPLSHSHDCPAIVASDARMLRRV---------------------A 262
Query: 208 EDCLQLSSIPSDRVTQGL-VKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL--SEGNKE 264
E + SS + G+ + ++LF D +L FL +
Sbjct: 263 ETLIGKSSPAWRKAESGMRIGIAQELFAASD----------ADTAKALNRFLAAARSGSG 312
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
Q+ ++P LA + ++ YE + + +R+ + + DV
Sbjct: 313 QDVAVPDLALCNGIATVITGYEAARFLHPAFEEMPDAFTGNVRQRLAIGASIARRDYDVA 372
Query: 325 QSVKTELRAA-LSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI---AGV 380
Q +++ L A L+ L ++V P P + + E RA LL
Sbjct: 373 QRIRSRLTADFLAGTLSKCDLIVSPITPRGCYRRKELNGPAESVRALTLELLDFNRWVNS 432
Query: 381 SGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETL 419
G V+IP L ++ VA+ ++ + D LL L
Sbjct: 433 LGLPAVAIPFRLSESGQMVAVQIIGRPYGDLDLLRFAGGL 472
>gi|422680715|ref|ZP_16738986.1| hypothetical protein PSYTB_10263 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331010060|gb|EGH90116.1| hypothetical protein PSYTB_10263 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 457
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTPGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV + V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|291525652|emb|CBK91239.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Eubacterium rectale DSM 17629]
Length = 503
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 206/465 (44%), Gaps = 77/465 (16%)
Query: 9 GAFMEKFVLQPSSSAHQLP--LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
GA + +Q A +L L+G+ AIKD +G +T + + T TA A
Sbjct: 50 GALKKAAEVQAKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKIL--YNFIPTYTAEA 107
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V + G +GKT MDE A E +G NP + VPGGSS GS AV A+ V
Sbjct: 108 VKRLEDAGCVIVGKTNMDEFAMGSTTETSAFGATKNPWNTEHVPGGSSGGSCAAVAAEEV 167
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
F+LG+DTGGS+R P+S+CG+ G +P++ VS G+I S D +G A D
Sbjct: 168 PFALGSDTGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKD-------- 219
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSD--RVTQGLVKSVEKLFGGHIIENVILG 244
+ D ++ + I + D +S+ D + T+ LV V+ + G I LG
Sbjct: 220 -----VTDCATIL---EAIASYDTKDSTSVNRDDLKFTEALVDDVKGMKIG--IPRDYLG 269
Query: 245 DYVKDKVPSLQHFLSEGNKEQ------------EYSIPS--LAALSSAMRLLQRY----- 285
D + +V S ++ K++ EY+IP+ + A + A L R+
Sbjct: 270 DGLDPEVKSAILAAADELKKKGAVVEEFDLGLVEYAIPAYYVIACAEASSNLARFDGVKY 329
Query: 286 -----EFKNNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKT 329
E+ + H + + GP + R+ ++A A + VK
Sbjct: 330 GYRTKEYTDLHNMYKKSRSEGFGPEVKRRIMLGSFVLSSGYYDAYYLKALR------VKA 383
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQ---MDPSALEVFRARAFSL-LSIAGVSGFCQ 385
++ A + +++ P P PKL DP ++++ +++ +++AG+ G
Sbjct: 384 LIKKAFDDAFAKYDVILGPAAPTTAPKLGESLSDP--IQMYLGDIYTISVNLAGLPG--- 438
Query: 386 VSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNTLKEELQR 429
+S+P G+ N LP+ + L+ + ++ + T EL+R
Sbjct: 439 ISLPCGMDKNGLPIGLQLIGDCFKEKNIIRAAYSFEKT--RELKR 481
>gi|227818637|ref|YP_002822608.1| allophanate hydrolase [Sinorhizobium fredii NGR234]
gi|36958892|gb|AAQ87317.1| Allophanate hydrolase [Sinorhizobium fredii NGR234]
gi|227337636|gb|ACP21855.1| predicted amidase [Sinorhizobium fredii NGR234]
Length = 601
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 181/405 (44%), Gaps = 36/405 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G T PD+A A A V + GA +GKT +D+
Sbjct: 67 PLWGIPFAVKDNIDVAGMPTTAACPDYAYL---AERDATVVRLLREAGALVVGKTNLDQF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G Y P N P VPGGSSSGSAVA +V F+LGTDT GS R+PA
Sbjct: 124 ATGLVGVRTPYPAPRNAIDPALVPGGSSSGSAVATAHGIVSFALGTDTAGSGRIPAGLNN 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +PS A+ST GV+P ++ D V FA L +AD + + +
Sbjct: 184 IVGLKPSIGALSTTGVVPACRTLDCVSIFA-------------LAVADAYQIFQVAARPD 230
Query: 207 AEDCLQLSSIPSDRVTQ------GLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
A D P ++ G+ + ++ F G ++ D ++ + SL H + E
Sbjct: 231 ATDSYSRDIAPRGGLSLPPVLKVGVPATADRRFFGDVLMESAYADALQ-MLRSLGHQIVE 289
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDW-VTTVKPDLGPGISERVWEAVR--TS 317
Y+ +L L + +RY + D T+ P ++ ++ + ++
Sbjct: 290 LPFADFYATAAL--LYEGAWVSERYAAVKDFFDANETSFHP-----VTREIYGGAKALSA 342
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
A + +++ L+ ++ L+ ++ +PT P +++++ + AR +
Sbjct: 343 ADAFEGFYALQA-LKRKVAPLIASVDMICVPTAPTHFTRMEVEAEPIRE-NARLGIYTNF 400
Query: 378 AGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ C +++P G D P +++LLA G D +L LH
Sbjct: 401 VNLLDMCGMAVPTGHRSDGRPASVTLLAPAGKDHLTASLAAELHR 445
>gi|422628880|ref|ZP_16694087.1| hypothetical protein PSYPI_03582 [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330937625|gb|EGH41544.1| hypothetical protein PSYPI_03582 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 287
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G RT S A AP+V + G S+GKT + E
Sbjct: 29 PFDGVPIAWKDLFDVAGSVTTAGAA--VRTSLSPALLDAPSVGLLARSGMVSLGKTNLSE 86
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + RVPGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 87 FAYSGLGLNPHFGTPINPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 146
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 147 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 176
>gi|345875921|ref|ZP_08827708.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri LMG
5135]
gi|343968218|gb|EGV36450.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri LMG
5135]
Length = 484
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 187/432 (43%), Gaps = 67/432 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L+ G ++G+T MDE A
Sbjct: 68 LTGVPIAYKDIFCQKGWKSACSSKMLDNFISPYTATV--VQNLLNEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
E YG NP + VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNETSFYGATKNPWNLENVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGLKPTYGVVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMASFD 231
Query: 208 E-DCLQLSSIPSDRVT------QGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
E D L D +GL + K + G + D K ++ ++
Sbjct: 232 ERDSTSLERAKEDYTRDLNQPLKGLKVGLPKEYFGEGMS----ADVQKTVQTAIDLLKAQ 287
Query: 261 GNK-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPD 301
G + + E SIP+ L+SA L RY +F N + T
Sbjct: 288 GAEMVEVSLPQTELSIPAYYVLASAEASTNLSRYDGVRYGHRAEQFGNLEELYSNTRAEG 347
Query: 302 LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
G + R+ ++A AQK+ + V + + AL I++ PT
Sbjct: 348 FGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVANDFQTALQQC----DIILAPTA 401
Query: 351 PGPPPKLQMDPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGS 408
P PKL D + ++++ + +++ ++G +++P G D LP+ + L+ + +
Sbjct: 402 PTAAPKLGSDINDPVQMYLSDIYTI--AVNLAGLPAMTLPAGFSSDGLPIGVQLIGNYFA 459
Query: 409 DGFLLNLVETLH 420
+ LL + +
Sbjct: 460 EAKLLGVAHQMQ 471
>gi|167821278|ref|ZP_02452958.1| indole acetimide hydrolase [Burkholderia pseudomallei 91]
gi|167916382|ref|ZP_02503473.1| indole acetimide hydrolase [Burkholderia pseudomallei 112]
Length = 447
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 48 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 105
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 106 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 164
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 165 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 219
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 220 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 271
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 272 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 329
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 330 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 387
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 388 RVIRQTGPATLGGVPSVSIPAGLSKHTGMPVGLMLEGPAGNDRRLLAIAREVERLLAR 445
>gi|424884582|ref|ZP_18308197.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393178281|gb|EJC78321.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 456
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 177/402 (44%), Gaps = 44/402 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD++D++G VT G+ A + A A V + G ++G+T M E A
Sbjct: 72 LDGIPIAWKDLYDIEGLVTTAGSVVLA-ADAPAKRDAAVVNLLRQAGMIAVGRTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 131 FSGLGINPHYGTPVNPRGSDLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-QLADDVNLVRPSQV 204
GI G++ + + GV P+A+S D++G + + + + + A D+ + RP Q
Sbjct: 191 GIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRNVRDAVWIDAAMRGRTAPDI-VERPLQG 249
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ + L +I D G+V + E +L+ G +
Sbjct: 250 L---ELLVPENIVFDGAEPGVVGAFEA---------------------ALERLQQAGARV 285
Query: 265 QEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
IP A + L+ RY F +H + + R +T+
Sbjct: 286 SRAVIP---AFNEIFDLMTRYGPLVTAEAFALHHQRLAGPDADRMDHRVVMRTRLGAKTT 342
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
+ L A + L+GD ++ PTV P + E+F A L
Sbjct: 343 LADYLAILEARGRLIADVERLVGDR-LIAFPTVAHVAPPIAPLEEDDELFFATNNKTLRN 401
Query: 378 AGVSGF---CQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNL 415
+ F C VSIP G + +PV + L A D LL +
Sbjct: 402 TALGNFLDWCGVSIPCGTGEAGVPVGLLLSATANRDEALLGI 443
>gi|158335190|ref|YP_001516362.1| amidase [Acaryochloris marina MBIC11017]
gi|158305431|gb|ABW27048.1| amidase [Acaryochloris marina MBIC11017]
Length = 457
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 182/406 (44%), Gaps = 36/406 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD+ G VT G+ ++ AT A AV + + GA +G MDE
Sbjct: 66 PLAGVPFAVKNLFDIAGTVTLAGS-KINQSQPPATQDATAVARLKAAGAILVGALNMDEY 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYG NP P R+ GGSS GSA AV LV +LG+DT GS+RVPAS CG
Sbjct: 125 AYGFVTINHHYGVTPNPHDPTRMSGGSSGGSAAAVAVGLVPLTLGSDTNGSIRVPASLCG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF+P++ +S AGV + S D +G FA + + V LQ +D + V +
Sbjct: 185 VYGFKPTYGRLSRAGVYLFSSSLDHIGPFARSVEDIALAFEV-LQGSDPRDPVCTDRPPV 243
Query: 207 AEDC------LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
A D +++ +I +D +G+ +V + DKV S
Sbjct: 244 APDKSGDMTGIRV-AIATDHFARGMTSTVAQAL---------------DKVSSALQV--- 284
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
Q ++P A +A L+ E H + T D P +R
Sbjct: 285 ---TQTVTLPESARSRAAAYLITASEGSQLHLQRLQTRLQDFDPATRDRFVAGAMMPNSW 341
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP-----KLQMDPSALEVFRARAFSLL 375
Q + R + + +++ PT P P P +++D + + F
Sbjct: 342 YLQAQRFRRWYRDQVREIFKTVDLIIAPTTPCPAPLIDQTTMELDGQTVPIRPHLGFYTQ 401
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ + G +S+P+ L LPV I L+A+ + + TL +
Sbjct: 402 PLSFI-GLPVLSVPIFLPGELPVGIQLIARPYDENTIFKAAVTLES 446
>gi|425465376|ref|ZP_18844685.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9809]
gi|389832377|emb|CCI24026.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9809]
Length = 443
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 174/402 (43%), Gaps = 38/402 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD++G VT G+ R H A A A+ + + GA +G T MDE A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP P RV GGSS GSA AV A LV +LG+DT GSVRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATANPLDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQVI 205
G +P+ VS G+ S D +G+F+ + + + + + L +N + ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLNGLEGVKIA 246
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A+D Q + P V + + E+L +
Sbjct: 247 LADDYFQQGAEPE--VIEAVTAIAERL-----------------------------GVTK 275
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ +IP A ++ ++ E N H + T D P +R + Q
Sbjct: 276 KITIPETARARASAYIITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQ 335
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGVS 381
+ R L + + I++ PT+P P L ++ ++ + R
Sbjct: 336 RFRRWYRDRLREIFSEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPFSFI 395
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L + L L
Sbjct: 396 GLPALSLPIKRPSQLPLGLQIIAAPDREDLILRVARVLEEML 437
>gi|326315597|ref|YP_004233269.1| amidase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372433|gb|ADX44702.1| Amidase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 457
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 188/410 (45%), Gaps = 40/410 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD+FDV G VT G+ A T AA AV + + GA +G+T M E
Sbjct: 74 PLAGLPVSVKDLFDVRGQVTRAGSAVLADTGPAAHDAV-AVARLRAAGAVLLGRTNMSEF 132
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N H+GTP NP RV GGSSSG+A V L +LGTDTGGS+R+P+++CG
Sbjct: 133 AFSGLGLNPHHGTPANPRDAGRVTGGSSSGAAATVALDLAAAALGTDTGGSIRIPSAFCG 192
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL--VRPSQV 204
+ GF+P+ V AG P+++S D++G A + VL D + RP
Sbjct: 193 LTGFKPTARRVPLAGAYPLSRSLDSIGPLARSVDCCAILDAVLSGEGSDADPAGARPLA- 251
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
++L + D V GL V F +L+ + G +
Sbjct: 252 -----GMRLGVV-QDLVMDGLEPEVAAAFES-----------------ALRRLSAAGARI 288
Query: 265 QEYSIPSLAAL---SSAMRLLQRYEFKNNHG---DWVTTVKPDLGPGISERVWEAVRT-S 317
+ + P L AL ++A L+ ++ + D T + D P +++R +
Sbjct: 289 ERVAFPELHALPRINAAGGLIAAEAWQVHRARLVDASTAARYD--PRVAQRTRRGESILA 346
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP---KLQMDPSALEVFRARAFSL 374
A IDV Q + L+AA LG ++PTV P L+ D + A
Sbjct: 347 ADYIDV-QDARARLQAAAQERLGHLDAWLMPTVAVRAPLRGPLEQDDARFFATNALVLRN 405
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
S+ C +S+P LPV +S+ HG+D +L + + L+
Sbjct: 406 TSVINFLDGCALSLPCEAPGELPVGLSVSGLHGADARILQVGRAVEACLR 455
>gi|365899622|ref|ZP_09437513.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3843]
gi|365419583|emb|CCE10055.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3843]
Length = 458
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 177/402 (44%), Gaps = 27/402 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV G T G+ R A A + + + GA +G M E
Sbjct: 65 PLAGVPFAVKNLFDVKGLATRAGS-KINRDLPPAARDATLIERMEAAGAVLVGALNMGEY 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP R+ GGSS GS AVG +LV +LG+DT GS+RVP+S+CG
Sbjct: 124 AYDFTGENVHDGPSRNPHDATRMSGGSSGGSGSAVGGRLVPLALGSDTNGSIRVPSSFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P S D +G FA + L LA D Q
Sbjct: 184 IFGLKPTYGRLSRARSFPFVASLDHLGPFARSVED--------LALAYDA-----MQGPD 230
Query: 207 AEDCLQLSSIP---SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+D S +P + + QG+ L GGH +++ + + ++ N
Sbjct: 231 PDDAACTSRVPEPVTPLLWQGISGLRVALAGGHFQKHLF-----PEAIEAVGRVAKALNA 285
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ +P A +A ++ E + H D + T D P + +R+ A +D
Sbjct: 286 TEVIEVPEAARARAAAYVISTTEGASLHLDRLRTRAHDFDPAVRDRLIAGAMIPAPLVDR 345
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE--VFRARAFSLLSIAGVS 381
Q + RA + L +L+ P P PKL L+ RA + +S
Sbjct: 346 AQKFRRWYRAQVLELFKQVDLLIAPATPCIAPKLGQATFVLDGVELPVRANIGIHTQPIS 405
Query: 382 --GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
G V++P+ L +P+ + L+A + L + L
Sbjct: 406 FIGLPVVAVPVPL-SPMPIGVQLIAAPWREDIALRVAHALQE 446
>gi|354598223|ref|ZP_09016240.1| Amidase [Brenneria sp. EniD312]
gi|353676158|gb|EHD22191.1| Amidase [Brenneria sp. EniD312]
Length = 449
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 96/151 (63%), Gaps = 3/151 (1%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ +IKD+FDV G T G+ A AA+ A V +L G +GKT M E A
Sbjct: 70 LDGVPVSIKDLFDVAGEPTAAGSRVLAAAPPAASHAA-VVARLLQAGVVVVGKTNMTEFA 128
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
YS G N HYGTP NP D R+PGGSSSG+AVAV + ++G+DTGGSVR+PA++C
Sbjct: 129 YSGLGINPHYGTPANPWDRDARRIPGGSSSGAAVAVADGMCFGAVGSDTGGSVRIPAAFC 188
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G+ G++P+ + AG++P++ S D++G A
Sbjct: 189 GLTGYKPTARRIDDAGLLPLSPSLDSIGVIA 219
>gi|218531927|ref|YP_002422743.1| allophanate hydrolase [Methylobacterium extorquens CM4]
gi|218524230|gb|ACK84815.1| allophanate hydrolase [Methylobacterium extorquens CM4]
Length = 611
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 178/411 (43%), Gaps = 29/411 (7%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L P A++ PL G+ FA+KD DV G T PD+A T A TA AV +L+ GA
Sbjct: 58 LGPFDPANK-PLWGVPFAVKDNVDVAGLPTTAACPDFAYTPQA---TALAVERLLAAGAI 113
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+GKT +D+ A + G Y P N P VPGGSSSGSAVAV LV F+LGTDT G
Sbjct: 114 LVGKTNLDQFATGLVGVRTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAG 173
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S RVPA I G +PS +VS GV+P ++ DT+ FA + V R++
Sbjct: 174 SGRVPAGLNNIVGLKPSLGSVSGRGVVPACRTLDTLSVFAGTVTEADTVFRIMAGYDPQD 233
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
R V L P RV G+ + +F G + D
Sbjct: 234 PYSRALPVPPRPGALP----PGLRV--GVPDAAGLIFAGDALSAAAFDGARADLHTVTGA 287
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
+ + +++ L L + + +RY+ ++ L P + A
Sbjct: 288 AATAVDLAPFFAVAGL--LYAGPWVAERYQAIRG---FIEERPEALHPTTRAIIGAATGH 342
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDP----SALEVFRAR 370
SA ELR A A+ +LV+PT P P L DP S L +
Sbjct: 343 SAADAFAGLYRLAELRRATEAVWRGIDVLVVPTYPRPRRVADLAADPVGPNSELGTY-TN 401
Query: 371 AFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
+LL + C +++P D P ++L+A G+DG + L LH
Sbjct: 402 FVNLLDL------CALAVPGRFRTDGFPSGVTLIAPRGADGLIAELGARLH 446
>gi|424778152|ref|ZP_18205103.1| amidase [Alcaligenes sp. HPC1271]
gi|422886980|gb|EKU29391.1| amidase [Alcaligenes sp. HPC1271]
Length = 408
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 180/403 (44%), Gaps = 32/403 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
+ GL ++K++ D+ G +T G + A A V +L GA IG T M E A
Sbjct: 26 VEGLPMSVKNLHDIAGCIT-LGGSAVLKDAEPAEQNATIVERLLRAGAILIGSTNMTEFA 84
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP + D R+PGGSSSG+ VAV + FS+GTDTGGS+R+P+++
Sbjct: 85 FSGLGINPHYGTPRSVWDRDNARIPGGSSSGAGVAVAQGMSVFSIGTDTGGSIRIPSAFN 144
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+P+ V + G +P+++S D+ G A + V +L V + P
Sbjct: 145 GLTGFKPTAERVPSEGTMPLSRSLDSNGPLAASVECCAIVDSILTD-QPYVPVATP---- 199
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A D L+L+ +P V G+ ++V F D+ +L +G +
Sbjct: 200 -ALDTLRLA-VPKTFVFDGIDETVRAAF---------------DRAIAL--LREQGAVVE 240
Query: 266 EYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
E ++P L R E + H D + + P ++ R+
Sbjct: 241 EINLPEFDQLPQINRKGGFVCAEAWSVHRDTLQSKGEQYDPRVASRILRGKDIDCADYIE 300
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGF 383
Q + +A+ + L + +++PTVP P++ + EV+ A +L + F
Sbjct: 301 LQDTRQAWISAVESRLERYDAVLMPTVPVVAPRIADLKESDEVYFATNGLVLRNPTLINF 360
Query: 384 ---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
C +S+P D PV + + A D LL + + L
Sbjct: 361 LDGCALSLPCHAADEAPVGLMVAAPAYHDEHLLAVGSAIERVL 403
>gi|413963272|ref|ZP_11402499.1| amidase [Burkholderia sp. SJ98]
gi|413929104|gb|EKS68392.1| amidase [Burkholderia sp. SJ98]
Length = 459
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 189/408 (46%), Gaps = 35/408 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +IKD+FDV+G VT G+ A ++ A++ A V + GA +G+T M E
Sbjct: 74 PLAGIPVSIKDLFDVEGQVTRAGSKALA-DNAPASADAVTVARLRRAGAVIVGRTNMSEF 132
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGS------SSGSAVAVGAKLVDFSLGTDTGGSVRV 140
A+S G N HYGTP +P + VPG + SSG+A +V + +LGTDTGGS+R+
Sbjct: 133 AFSGLGLNPHYGTPRSPWRAN-VPGDARIAGGSSSGAAASVADGMAAVALGTDTGGSIRI 191
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA+ CG+ GF+P+ S + G +P++++ D+ G V R+L V R
Sbjct: 192 PAALCGLTGFKPTASRIPKQGGVPLSKTLDSFGPIGVSVACCALVDRILAGRDPGVPATR 251
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P + + +L + ++ VT G+ SV + G V+D + L E
Sbjct: 252 PLEGV------RLGVL-TNYVTDGVEASVASAVAAAVNHLAAAGALVEDVRFAPLDRLPE 304
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA-VRTSAQ 319
N+ +I + Y + H + D P + R+ A ++A
Sbjct: 305 INRYPLVAI-------------EAYAW---HRKLMAERGADYDPRVLARLQRAEAASAAD 348
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF-RARAFSLLSIA 378
ID+C++ + AA + L ++ PTVP PP++ S + F R A L +
Sbjct: 349 YIDLCEARAAMIEAARTTLWQRFDAILCPTVPVLPPRIADLESDDDAFTRTNALILRNPT 408
Query: 379 GVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ C +S+P PV + L SD LL++ + L+
Sbjct: 409 AFNFLDACALSLPCHPRGEAPVGLMLAGAPNSDDTLLSIGRAVEAVLE 456
>gi|300718461|ref|YP_003743264.1| amidase [Erwinia billingiae Eb661]
gi|299064297|emb|CAX61417.1| Amidase [Erwinia billingiae Eb661]
Length = 448
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 180/406 (44%), Gaps = 54/406 (13%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGN---PDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PL G+ IKD+ G + PD S +T TAPAV +L GA GKT +
Sbjct: 70 PLQGMPLGIKDLLHWRGTPCSASSRQLPD-----SRSTHTAPAVTRLLQHGAVIAGKTQL 124
Query: 84 DEMAYSINGENKHYGTPTNP--CAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
E A+ G N+ GTP NP C RVPGGSSSGSAVAV A LV ++GTDTGGSVR+P
Sbjct: 125 VEFAFGGWGINQSAGTPWNPWDCDVHRVPGGSSSGSAVAVAAGLVPAAIGTDTGGSVRIP 184
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A+ G+ G +P+ + +S G IP++ + D++G L D L+
Sbjct: 185 AALNGLVGLKPTQNRISREGCIPLSTTLDSIG--------------PLTHTVADAELIYR 230
Query: 202 S-----QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
S Q + D L+++ I D + G I+ I+ K + +
Sbjct: 231 SMSGDTQRLAVADTLKVAFIEPDTL-------------GAAIDPEIVAALEKTQRRLSEA 277
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
+S + +S L+A S + + + + H + +T+ + P +E++
Sbjct: 278 GISVTRIKLPFSWTGLSARSGEIISAEAWAW---HREMMTSHRDRYNPLTAEKLLHGAAI 334
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPT--VPGPPPKLQMDPSALEVFRARAFSL 374
+ + + + + L+ D IL++PT + P + A RA +
Sbjct: 335 NKESFEGLLRQREQHIGLFHELMDDWDILLMPTLAITACPVDEVNEQQATLALLTRAVNY 394
Query: 375 LSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETL 419
L C +++P+ L + +P+ L+A + + LL + L
Sbjct: 395 LD------GCAITLPVALSSEGMPIGAQLVANYHHESQLLAMAHRL 434
>gi|196231388|ref|ZP_03130247.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chthoniobacter
flavus Ellin428]
gi|196224724|gb|EDY19235.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Chthoniobacter
flavus Ellin428]
Length = 483
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 184/432 (42%), Gaps = 56/432 (12%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ AIKD+ +V G + S +T + + + GA G+T +DE
Sbjct: 62 LPLGGVPIAIKDVINVTGEPCTAASKILLGYRSNYDATV--IRKLRAAGAIPFGRTNLDE 119
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + EN +G NP RVPGGSS GSA V + SLG+DTGGS+R PA+ C
Sbjct: 120 FAMGSSTENSAFGRTNNPWDTSRVPGGSSGGSAAVVASHEAFASLGSDTGGSIRQPAALC 179
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA-----DDVNLVR 200
G G +P++ VS G+I A S D +G F K + G +L ++ D +L
Sbjct: 180 GCVGLKPTYGRVSRFGLIAFASSLDQIGPFT---KTVRDAGLLLNVISGRDPQDSTSLDE 236
Query: 201 PSQVIFAEDCLQLSSI----PSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQ 255
P A+ L + P + +G+ V+ I LG + D +P+ +
Sbjct: 237 PVPDYTAQLGRDLKGVRLGLPREYFIEGVDPQVDSAVRAAIKHYESLGAEIVDVSLPNTE 296
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGD-------WVTTVKPDLGPGISE 308
H + Y I + A S+ + + + D + T + GP +
Sbjct: 297 HAVG------VYYIIATAEASANLARFDGVRYGHRAPDPTGLLDQYGRTREEGFGPEVKR 350
Query: 309 RV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
R+ ++A AQK V+T +R + +V PT P P K
Sbjct: 351 RIILGTYVLSSGYYDAYYLRAQK------VRTLIRDDFTKAFEKCDAIVCPTSPEPAFKA 404
Query: 358 ---QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD----NLPVAISLLAKHGSDG 410
DP L+++ A F++ A ++G C +S+P G + LP+ + +L K +
Sbjct: 405 GDRSDDP--LKMYLADIFTI--AANLAGICGISVPCGFANVDGRQLPIGLQILGKPFGEA 460
Query: 411 FLLNLVETLHNT 422
LL + + +
Sbjct: 461 QLLQIADAYEQS 472
>gi|238923549|ref|YP_002937065.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Eubacterium rectale
ATCC 33656]
gi|259647215|sp|C4ZHB9.1|GATA_EUBR3 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|238875224|gb|ACR74931.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Eubacterium rectale
ATCC 33656]
Length = 503
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 205/465 (44%), Gaps = 77/465 (16%)
Query: 9 GAFMEKFVLQPSSSAHQLP--LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
GA + +Q A +L L+G+ AIKD +G +T + + T TA A
Sbjct: 50 GALKKAAEVQAKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKIL--YNFIPTYTAEA 107
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V + G +GKT MDE A E +G NP + VPGGSS GS AV A+ V
Sbjct: 108 VKRLEDAGCVIVGKTNMDEFAMGSTTETSAFGATKNPWNTEHVPGGSSGGSCAAVAAEEV 167
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
F+LG+DTGGS+R P+S+CG+ G +P++ VS G+I S D +G A D
Sbjct: 168 PFALGSDTGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKD-------- 219
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSD--RVTQGLVKSVEKLFGGHIIENVILG 244
D ++ + I + D +S+ D + T+ LV V+ + G I LG
Sbjct: 220 ------VTDCAIIL--EAIASYDTKDSTSVNRDDLKFTEALVDDVKGMKIG--IPKDYLG 269
Query: 245 DYVKDKVPSLQHFLSEGNKEQ------------EYSIPS--LAALSSAMRLLQRY----- 285
D + +V S ++ K++ EY+IP+ + A + A L R+
Sbjct: 270 DGLDPEVKSAILAAADELKKKGAVVEEFDLGLVEYAIPAYYVIACAEASSNLARFDGVKY 329
Query: 286 -----EFKNNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKT 329
E+ + H + + GP + R+ ++A A + VK
Sbjct: 330 GYRTKEYTDLHNMYKKSRSEGFGPEVKRRIMLGSFVLSSGYYDAYYLKALR------VKA 383
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQM---DPSALEVFRARAFSL-LSIAGVSGFCQ 385
++ A + +++ P P PKL DP ++++ +++ +++AG+ G
Sbjct: 384 LIKKAFDDAFAKYDVILGPAAPTTAPKLGESLSDP--IQMYLGDIYTISVNLAGLPG--- 438
Query: 386 VSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNTLKEELQR 429
+S+P G+ N LP+ + L+ + ++ + T EL+R
Sbjct: 439 ISLPCGMDKNGLPIGLQLIGDCFKEKNIIRAAYSFEKT--RELKR 481
>gi|29833239|ref|NP_827873.1| allophanate hydrolase [Streptomyces avermitilis MA-4680]
gi|29610361|dbj|BAC74408.1| putative amidase family protein [Streptomyces avermitilis MA-4680]
Length = 550
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 175/409 (42%), Gaps = 31/409 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
++ +LPL+G FA+K DV G T G P +A A APAV + + GA +G
Sbjct: 44 AAGQRLPLAGRLFAVKGNIDVHGLATTAGCPAYAYLPEA---DAPAVARLRAAGAIVLGT 100
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T +D+ A + G YG P R+ GGSS+GSAVAV +VDF+LGTDT GS RV
Sbjct: 101 TNLDQFATGLVGTRSPYGAVRGAYDPARISGGSSAGSAVAVALGIVDFALGTDTAGSGRV 160
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++ GI G +P+ V T G +P S D V FA + L + L LA
Sbjct: 161 PAAFNGIVGLKPTRGLVPTTGTVPACASLDCVTVFA---RTLPEAEQALAHLASPPGRDL 217
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P A +++ P ++ G + E G+ + V +H ++
Sbjct: 218 PPLPQRAPGPWRVAVPPLPQL-------------GELDEG--WGEAYEAAV---EHLVAA 259
Query: 261 GNKEQEYSI----PSLAALSSAMRLLQRYEFKNNHGD-WVTTVKPDLGPGISERVWEAVR 315
G + + + A L + +RY + D ++ L P ++ + A
Sbjct: 260 GVSVRTIDLSPFTEAAAMLYEGAFVAERYTAVGSFVDKLISEGGAGLDPTVAGIITRARD 319
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
A ++ Q LR A LGD L++PT PG P ++ L AR
Sbjct: 320 IPAHRLFADQERLATLRTRALAELGDADALLLPTTPGHPTLAEVAADPLGA-NARLGRFT 378
Query: 376 SIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ + V+ P GL LP + L+ +DG L + L L
Sbjct: 379 NSTNLFDLAAVAAPAGLTPAQLPFGVMLIGPAFTDGRLARIAALLQPQL 427
>gi|298368771|ref|ZP_06980089.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp. oral
taxon 014 str. F0314]
gi|298282774|gb|EFI24261.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp. oral
taxon 014 str. F0314]
Length = 485
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 185/425 (43%), Gaps = 67/425 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + G+ S T+T V +L+ G ++G+T MDE A
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACGSKMLDNFVSPYTATV--VQNLLNEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
E YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMASFD 231
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHII--ENVILGDYVK-DKVPSLQHFL----SE 260
E S +R + + ++K G I G+ D +LQ+ + ++
Sbjct: 232 ER----DSTSLERSKEDYTRDLDKPLKGMKIGLPKEYFGEGADADVQAALQNVINLLKAQ 287
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRY----------EFKNNHGDWVTTVKPD 301
G + E S+P A A + A L RY +F + + T
Sbjct: 288 GAETIEVSLPQTALSIPAYYVLASAEASTNLSRYDGVRYGHRATQFSDLEEMYSNTRAEG 347
Query: 302 LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
G + R+ ++A AQK+ + V + + A + ++ PT
Sbjct: 348 FGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVANDFQTAFAQC----DFILAPTA 401
Query: 351 PGPPPKLQMD-PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGS 408
P PKL D ++++ + +++ ++G +++P G N LP+ + + H S
Sbjct: 402 PTAAPKLGSDIHDPVQMYLSDIYTI--AVNLAGLPALTLPAGFSGNGLPIGVQFIGNHFS 459
Query: 409 DGFLL 413
+ +L
Sbjct: 460 EAKIL 464
>gi|344173791|emb|CCA88973.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
syzygii R24]
Length = 448
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 184/405 (45%), Gaps = 37/405 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ A AATS A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAH-QPAATSDAAAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+P+++C +
Sbjct: 132 FSGLGLNPHYGTPRMPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFCAL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V AG +P++ S D+ G LA+ V+ + +
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGG-----------------PLANSVDCCAIVDAVLS 234
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L ++P + GL + + G +++ + + + V L+H G + +
Sbjct: 235 GQTLDTDAVPLAGLRLGLTRD----YVGADLDDTVTTAFER-AVARLEH---AGARIVRF 286
Query: 268 SIPSLAAL-----SSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
P L L + + + + H + + ++ R+ + SA
Sbjct: 287 DFPELLRLPEINGGGGLPAAEAWAWHRPH---LARAEAQYDHRVAARIRRGEQMSAAAYL 343
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFSLL--SIAG 379
+ + + AA LG+ ++PTV PP++ ++ + FRA A L S+
Sbjct: 344 DVMAARERMIAAARKRLGNIDAWLMPTVAIVPPEVAPLEADDAQFFRANALVLRNPSVIN 403
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C +++P+ LPV +SL D +L + + L+
Sbjct: 404 FLDGCALTLPVHAAGELPVGLSLCGLADDDARILRVGRAVEAALR 448
>gi|367478147|ref|ZP_09477468.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 285]
gi|365269536|emb|CCD89936.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 285]
Length = 475
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 167/371 (45%), Gaps = 33/371 (8%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQL-----------PLSGLTFAIKDIFDVDGHVTGFG 49
+A+RD +F + V + + A + PL+G+ FA+K++FDV+G T G
Sbjct: 37 IAARDGVLNSFTDITVERARTKARAVDADIAAGKPVGPLAGVPFAVKNLFDVEGLPTRAG 96
Query: 50 NPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRV 109
+ R + A+ A + + S GA +G M E AY GEN H G NP P R+
Sbjct: 97 S-KINRDRAPASRDATLIERMESAGAVLVGALNMGEYAYDFTGENVHDGPSRNPHDPSRM 155
Query: 110 PGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSF 169
GGSS GS AVG LV +LG+DT GS+RVP+S+CGIFG +P++ +S A P S
Sbjct: 156 SGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCGIFGLKPTYGRLSRARSFPFVMSL 215
Query: 170 DTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIP---SDRVTQGLV 226
D +G FA L LA DV Q ++D + P S ++QG+
Sbjct: 216 DHLGPFARSVDD--------LALAYDV-----MQGPDSDDAACTARAPEPVSSLLSQGIG 262
Query: 227 KSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYE 286
L GGH +N L D V + L Q +P A +A ++ E
Sbjct: 263 DLRIALAGGHFQKN--LFPEAADAVSRVAGAL---KVTQVIEVPEAARARAAAYVISTTE 317
Query: 287 FKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILV 346
+ H D + D P + +R+ A +D Q + RA + L +L+
Sbjct: 318 GASLHLDRLRKQPQDFDPAVRDRLIAGAMIPAPMVDRAQKFRRWYRAQVLELFKSVDVLI 377
Query: 347 IPTVPGPPPKL 357
P P PKL
Sbjct: 378 APATPCIAPKL 388
>gi|53723142|ref|YP_112127.1| indole acetimide hydrolase [Burkholderia pseudomallei K96243]
gi|76818487|ref|YP_336391.1| indole acetimide hydrolase [Burkholderia pseudomallei 1710b]
gi|254264727|ref|ZP_04955592.1| amidase family protein [Burkholderia pseudomallei 1710a]
gi|418397471|ref|ZP_12971159.1| indole acetimide hydrolase [Burkholderia pseudomallei 354a]
gi|418556974|ref|ZP_13121580.1| indole acetimide hydrolase [Burkholderia pseudomallei 354e]
gi|52213556|emb|CAH39609.1| putative indole acetamide hydrolase [Burkholderia pseudomallei
K96243]
gi|76582960|gb|ABA52434.1| indole acetamide hydrolase [Burkholderia pseudomallei 1710b]
gi|254215729|gb|EET05114.1| amidase family protein [Burkholderia pseudomallei 1710a]
gi|385365882|gb|EIF71536.1| indole acetimide hydrolase [Burkholderia pseudomallei 354e]
gi|385368600|gb|EIF74040.1| indole acetimide hydrolase [Burkholderia pseudomallei 354a]
Length = 467
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 68 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 125
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 126 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 184
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 185 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 239
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 240 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 291
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 292 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 349
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 350 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 407
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 408 RVIRQTGPATLGGVPSVSIPAGLSKHTGMPVGLMLEGPAGNDRRLLAIAREVERLLAR 465
>gi|167829616|ref|ZP_02461087.1| indole acetimide hydrolase [Burkholderia pseudomallei 9]
gi|226193919|ref|ZP_03789520.1| amidase family protein [Burkholderia pseudomallei Pakistan 9]
gi|225933864|gb|EEH29850.1| amidase family protein [Burkholderia pseudomallei Pakistan 9]
Length = 442
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 43 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 100
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 101 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 159
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 160 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 214
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 215 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 266
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 267 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 324
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 325 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 382
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 383 RVIRQTGPATLGGVPSVSIPAGLSKHTGMPVGLMLEGPAGNDRRLLAIAREVERLLAR 440
>gi|254185711|ref|ZP_04892229.1| amidase family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157933397|gb|EDO89067.1| amidase family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 454
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 55 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 112
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 113 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 171
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 172 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 226
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 227 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 278
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 279 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 336
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 337 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 394
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 395 RVIRQTGPATLGGVPSVSIPAGLSKHTGMPVGLMLEGPAGNDRRLLAIAREVERLLAR 452
>gi|237508407|ref|ZP_04521122.1| indole acetimide hydrolase [Burkholderia pseudomallei MSHR346]
gi|235000612|gb|EEP50036.1| indole acetimide hydrolase [Burkholderia pseudomallei MSHR346]
Length = 553
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 184/416 (44%), Gaps = 33/416 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 154 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 211
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 212 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 270
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 271 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 325
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 326 PAPVALA--GLRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 377
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 378 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 435
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 436 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVIDSGHDLPSDAAYALFT 493
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 494 RVIRQTGPATLGGMPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLL 549
>gi|402826255|ref|ZP_10875469.1| amidase [Sphingomonas sp. LH128]
gi|402260200|gb|EJU10349.1| amidase [Sphingomonas sp. LH128]
Length = 451
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 173/399 (43%), Gaps = 43/399 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ + +KD+FD+ G T G+ + + A S A AV + + GA + MDE
Sbjct: 64 PLAGVLYGVKDLFDLQGLPTTAGSTIYV-DAAPARSDAEAVARLKAAGAICLATLNMDEF 122
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N YGT NP P R+ GGSS GSA V A L+ F+LG+DT GS+RVPAS CG
Sbjct: 123 AYGFATINAAYGTTRNPHDPSRLAGGSSGGSAAVVAAGLLAFALGSDTNGSIRVPASLCG 182
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G +P+ + AGV P A+SFD +G F +D+ LV QV+
Sbjct: 183 LYGLKPTQEGLPLAGVFPFAESFDDIGPFTRS--------------VEDMALV--WQVLA 226
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ P+ R + + GG EN + L +
Sbjct: 227 GRE-------PASRSEFRIAR-----LGGRFRENA--------QGEQLAAIDAIAPDAPL 266
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A SA ++ YE H + P + +R+ + Q+
Sbjct: 267 IELPEIARARSAAFIITAYEGGTLHRQALAENAMGFDPQVRDRLLAGALLPETLYEEAQA 326
Query: 327 VKTELRAALSALLGDHGILVIPTVP--GPP---PKLQMDPSALEVFRARAFSLLSIAGVS 381
+ E RA + AL+ D+ +L+ P P PP P++ +D AL RA +
Sbjct: 327 FRAEYRARIEALVADYDVLLAPATPTFAPPIADPRILID-GALSPARADLGIHTQPITFT 385
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
+++PL LP+ + L+ G + L L
Sbjct: 386 ALPSLAVPLYRPGMLPIGLQLIGGPGREPDLFAFAAMLE 424
>gi|374578535|ref|ZP_09651631.1| allophanate hydrolase [Bradyrhizobium sp. WSM471]
gi|374426856|gb|EHR06389.1| allophanate hydrolase [Bradyrhizobium sp. WSM471]
Length = 606
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 178/423 (42%), Gaps = 26/423 (6%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWAR--THSAATSTAPAV 67
A E L + A LPL G+ +KD D G T P ++ TH + AV
Sbjct: 56 AITEAEKLATRADAASLPLYGVPVVVKDNIDALGFPTTAACPAFSYLPTHDST-----AV 110
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+ + GA IGKT +D+ A + G YG P N D +PGGSSSGSA AVGA LV
Sbjct: 111 ARLRAAGAIIIGKTNLDQFATGLVGVRSPYGIPRNAIREDLIPGGSSSGSATAVGAGLVP 170
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW--DPKILNRV 185
SLGTDT GS RVPA I G +PS +STAG++P ++ D + FA D L
Sbjct: 171 LSLGTDTAGSGRVPAMLNNIVGLKPSLGMISTAGLVPACRTLDCISVFALTVDDAALALS 230
Query: 186 GRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
AD + RP I + +P++ + G+ + + +F G D
Sbjct: 231 VMAGPDQADPFSRDRPLGAI--------TPLPAN-LRLGVPRGGQLIFFGDKKAEAAYAD 281
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG 305
+K + ++ L E + E Y L L + +RY D + + + P
Sbjct: 282 ALK-RWTAIGATLVEFDLEPFYETARL--LYEGPWVAERYLVIR---DLLASAPDAIHPV 335
Query: 306 ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE 365
E R +A LR + LV+PT P Q+ + +E
Sbjct: 336 TREITVAGARLTAADTFSALYRLQGLRKIAERTFTNIDALVLPTAPTAYTTAQVLANPIE 395
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+R + + + C +++P + D +P I+LLA G D L ++ H K
Sbjct: 396 -LNSRLGTYTNFVNLLDLCGLAVPAAMRADGIPFGITLLAPTGHDALLASIGRVFHADTK 454
Query: 425 EEL 427
L
Sbjct: 455 LTL 457
>gi|66047165|ref|YP_237006.1| hypothetical protein Psyr_3938 [Pseudomonas syringae pv. syringae
B728a]
gi|63257872|gb|AAY38968.1| Amidase [Pseudomonas syringae pv. syringae B728a]
Length = 457
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|320334835|ref|YP_004171546.1| amidase [Deinococcus maricopensis DSM 21211]
gi|319756124|gb|ADV67881.1| Amidase [Deinococcus maricopensis DSM 21211]
Length = 388
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
+GA+ + P A PL+ LTF+ KD++ V G G + R A + +P V
Sbjct: 6 FGAWAYRPA-TPLRGAPGGPLADLTFSAKDLYGVPGWPLGGSS----RAALPAVAPSPLV 60
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+ + GAT +GKT + E+A + G N GT NP RV GGSSSG+AV+V VD
Sbjct: 61 AHLRALGATLVGKTHLHEVALGVTGANAFGGT-RNPLDATRVAGGSSSGAAVSVATGEVD 119
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPS--HSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
F+LGTDTGGS+RVPA++CG+ GF+P+ H+A T GV+P++ + D G A D +++ RV
Sbjct: 120 FALGTDTGGSIRVPAAWCGVVGFKPTKGHAAWPTDGVLPLSLTCDHAGPLARDVQVVARV 179
>gi|422405004|ref|ZP_16482052.1| hypothetical protein Pgy4_14141, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330879198|gb|EGH13347.1| hypothetical protein Pgy4_14141 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 325
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 91/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 74 PFDGVLIAWKDLFDVAGSVTTAGAA--VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 131
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV + V ++GTDT GS+RVPA+
Sbjct: 132 FAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAA 191
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 192 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 221
>gi|167851097|ref|ZP_02476605.1| indole acetimide hydrolase [Burkholderia pseudomallei B7210]
gi|403524113|ref|YP_006659682.1| indole acetimide hydrolase [Burkholderia pseudomallei BPC006]
gi|403079180|gb|AFR20759.1| indole acetimide hydrolase [Burkholderia pseudomallei BPC006]
Length = 442
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 43 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 100
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 101 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 159
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 160 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 214
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 215 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 266
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 267 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 324
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 325 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 382
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H ++PV + L G+D LL + + L
Sbjct: 383 RVIRQTGPATLGGVPSVSIPAGLSKHTSVPVGLMLEGPAGNDRRLLAIAREVERLLAR 440
>gi|422675326|ref|ZP_16734671.1| hypothetical protein PSYAR_21412 [Pseudomonas syringae pv. aceris
str. M302273]
gi|330973045|gb|EGH73111.1| hypothetical protein PSYAR_21412 [Pseudomonas syringae pv. aceris
str. M302273]
Length = 457
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GFR + S GV P+A + D+VG
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVG 219
>gi|242313159|ref|ZP_04812176.1| amidase family protein [Burkholderia pseudomallei 1106b]
gi|242136398|gb|EES22801.1| amidase family protein, partial [Burkholderia pseudomallei 1106b]
Length = 500
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 101 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 158
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 159 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 217
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 218 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 272
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 273 PAPVALA--GLRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 324
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 325 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 382
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 383 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 440
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H ++PV + L G+D LL + + L
Sbjct: 441 RVIRQTGPATLGGVPSVSIPAGLSKHTSVPVGLMLEGPAGNDRRLLAIAREVERLLAR 498
>gi|217967553|ref|YP_002353059.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dictyoglomus
turgidum DSM 6724]
gi|217336652|gb|ACK42445.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dictyoglomus
turgidum DSM 6724]
Length = 483
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 191/428 (44%), Gaps = 64/428 (14%)
Query: 25 QLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
+LPL G+ AIKD I D T + A + + GA IGKT +
Sbjct: 60 KLPLYGVPIAIKDNILTKDIRTTCASK---ILENFIPPYDATVIKRLKENGAIIIGKTNL 116
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + EN +G NP +RVPGGSS GSA V A V SLG+DTGGS+R+PAS
Sbjct: 117 DEFAMGSSCENSAFGPTKNPWDIERVPGGSSGGSAACVSAGEVPVSLGSDTGGSIRLPAS 176
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+ G+ G +P++ VS G++ A S D +G F GR + +D+ +V Q
Sbjct: 177 FTGVIGLKPTYGLVSRFGLVAFASSLDQIGPF----------GRTV----EDIAIVL--Q 220
Query: 204 VIFAEDCLQLSSIPSD--RVTQGLVKSV--------EKLFGGHIIENVILGDYVKDKVPS 253
VI D + +S P + + L KSV ++L+ + E V++ + +K S
Sbjct: 221 VIAGHDPMDSTSSPYEIPNYLESLGKSVKDWKVGIPKELWQKGVSEEVLI---ILEK--S 275
Query: 254 LQHFLSEGNKEQEYSIPSLA---------ALSSAMRLLQRYE-FKNNHGDW-----VTTV 298
F G K +E S+PSL + S A L RY+ K + D+ ++
Sbjct: 276 FDVFKEMGVKVEEISLPSLEYALPVYYIISTSEASSNLARYDGVKYGYRDFWAEDLISMY 335
Query: 299 KPDLGPGISERVWEAV-----RTSAQKIDV----CQSVKTELRAALSALLGDHGILVIPT 349
K G G V + SA D V+ +R I+ PT
Sbjct: 336 KQTRGKGFGSEVKRRIILGTYALSAGYYDAYYLKATKVRRLIRMEFEEAFKKVDIIASPT 395
Query: 350 VPGPPPKL-QMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHG 407
P P KL + L+++ ++ +++AG+ +S+P G ++NLPV I ++
Sbjct: 396 SPVLPFKLGERISDPLQMYLTDIMTIPVNLAGIPA---ISMPAGFYNNLPVGIQFMSPFF 452
Query: 408 SDGFLLNL 415
++ LL
Sbjct: 453 TEDRLLQF 460
>gi|390440116|ref|ZP_10228468.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis sp. T1-4]
gi|389836482|emb|CCI32592.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis sp. T1-4]
Length = 443
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 175/402 (43%), Gaps = 38/402 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD++G VT G+ R H A A A+ + + GA +G T MDE A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQPLEAAGAVLVGATNMDEYA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP P RV GGSS GSA AV A LV +LG+DT GSVRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQVI 205
G +P+ VS G+ S D +G+F+ + + + + + L +N + ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSDNVADMAAIWSLFAKNNLKAPLNGLEGVKIA 246
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A+D Q + P V + + E+L +
Sbjct: 247 LADDYFQQGAEPE--VIEAVTAIAERL-----------------------------GVTK 275
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ +IP +A ++ E N H + T D P +R + Q
Sbjct: 276 KITIPETVRARAAAYIITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQ 335
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGVS 381
+ R L + + I++ PT+P P+L ++ ++ + R
Sbjct: 336 RFRRWYRDRLREIFSEVDIILTPTIPCIAPQLGVEKMIIDGQELLIRPNLGRFTQPFSFI 395
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L++ L L
Sbjct: 396 GLPALSLPIKRSSRLPLGLQIIAAPDREDLILSVARVLEEML 437
>gi|422303654|ref|ZP_16391005.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9806]
gi|389791410|emb|CCI12836.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9806]
Length = 438
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 175/403 (43%), Gaps = 38/403 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD+ G VT G+ R H AA A A+ + + GA +G T MDE
Sbjct: 67 PLAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAVGAVLVGATNMDEY 125
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP P RV GGSS GSA AV A LV +LG+DT GSVRVPA+ CG
Sbjct: 126 AYGFVTENAHYGATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCG 185
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQV 204
+ G +P+ VS G+ S D G+F+ + + + + + L +N + ++
Sbjct: 186 VVGLKPTFGRVSRQGLFLFVSSLDHPGFFSGNVADMAAIWSLFAKNNLKASLNGLEGVKI 245
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
A+D Q + P V + + E+L
Sbjct: 246 ALADDYFQQGAEPE--VFESVTAIAERL-----------------------------GVS 274
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
Q+ +IP A +A ++ E N H + T D P +R +
Sbjct: 275 QKITIPETARARAAAYIITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQA 334
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGV 380
Q + R L + + I++ PT+P P L ++ ++ + R
Sbjct: 335 QRFRRWYRNRLREIFSEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPFSF 394
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L++ L L
Sbjct: 395 IGLPALSLPIKRPSQLPLGLQIIAAPDREDLILSVARVLEEML 437
>gi|440224690|ref|YP_007338086.1| putative amidase [Rhizobium tropici CIAT 899]
gi|440043562|gb|AGB75540.1| putative amidase [Rhizobium tropici CIAT 899]
Length = 461
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 92/148 (62%), Gaps = 3/148 (2%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+F + G T G+ A A V A+ + G ++G+ M E A
Sbjct: 72 LDGIPVAWKDLFAIAGLPTTAGSIVLADAAPAQDDAD-VVRALQAAGMVAVGRVNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP A D R+PGGSSSGSAVAV A LV ++GTDTGGSVR+P+++
Sbjct: 131 FSGIGLNPHYGTPLNPLATDVPRIPGGSSSGSAVAVAAGLVPVAIGTDTGGSVRIPSAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ G++ SH S AGV P++ S D++G
Sbjct: 191 GLVGYKASHGRYSMAGVFPLSTSLDSLG 218
>gi|300712846|ref|YP_003738658.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus
jeotgali B3]
gi|448295437|ref|ZP_21485505.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus
jeotgali B3]
gi|299126530|gb|ADJ16867.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus
jeotgali B3]
gi|445584374|gb|ELY38697.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halalkalicoccus
jeotgali B3]
Length = 474
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 183/430 (42%), Gaps = 52/430 (12%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D +Y A ++ + +P + PLSGL+F +KD V G G+ + T A
Sbjct: 57 DDEYNALLDVYD-EPRQRRTEGPLSGLSFVLKDNIAVKGLRMTCGS---KILETVPTIDA 112
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
A+ +L G + +GK MD A+ G G NP DR+PGG+SSG VAV A
Sbjct: 113 TALNRLLDAGGSVVGKANMDAFAFGPGGLWSERGRVRNPIDADRIPGGTSSGCGVAVAAG 172
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
L D LG+DTGGSVR PA+ CG+ G +P+H VS G + S DT+G A D + R
Sbjct: 173 LADVGLGSDTGGSVRSPAACCGVVGIKPTHGLVSRYGFVENVPSADTIGPLARDVETAAR 232
Query: 185 VGRVLL------QLADDVNLVRPSQVIFAEDCLQLSSI---PSDRVTQGLVKSVEKLFGG 235
V + +N+V ++ I + D LQ+ + P D ++ + +++ +L
Sbjct: 233 VLEAIRGPDVHDPKTSAINVVPLNRNIESFDSLQIGVLELEPHD-ISAPVTEAIAELAAD 291
Query: 236 HIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWV 295
E+ + V S+ L + E+ YSI S A + L R F G
Sbjct: 292 LDAESGV-------SVGSVN--LDMEDIEEAYSIISGAEFA----WLLRQSFAQRGG--- 335
Query: 296 TTVKPDL-----GPGISERV--------WEAVRTSAQKIDVCQSVKTELRAALSALLGDH 342
P++ G +++ + + T + + Q + L
Sbjct: 336 VPTPPEMISLVDGEALNDHIIGRLLPGAYLDALTDGRAYALAQEQVVAFKHTLKTYFERF 395
Query: 343 GILVIPTVPGPPPK---LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVA 399
+L+ PT+ PPK L+ A+ FSL VS+P D LPV+
Sbjct: 396 DVLLTPTLRTLPPKPEQLRDSEGGFNYTIAKQFSLAETPA------VSVPFTERDGLPVS 449
Query: 400 ISLLAKHGSD 409
LLA D
Sbjct: 450 AQLLAPQFED 459
>gi|226830794|ref|YP_001076907.2| indole acetimide hydrolase [Burkholderia pseudomallei 1106a]
gi|210148329|gb|ABN94853.2| amidase family protein [Burkholderia pseudomallei 1106a]
Length = 467
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 68 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 125
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 126 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 184
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 185 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 239
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 240 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 291
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 292 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 349
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 350 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 407
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H ++PV + L G+D LL + + L
Sbjct: 408 RVIRQTGPATLGGVPSVSIPAGLSKHTSVPVGLMLEGPAGNDRRLLAIAREVERLLAR 465
>gi|270308501|ref|YP_003330559.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase
[Dehalococcoides sp. VS]
gi|270154393|gb|ACZ62231.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase
[Dehalococcoides sp. VS]
Length = 486
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 174/423 (41%), Gaps = 41/423 (9%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H PL+G+ A+KD+ G T + + A V + GA +GKT M
Sbjct: 67 HIRPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAEEGAVLLGKTNM 124
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + EN + T NP +VPGGSS GSA V A FSLG+DTGGS+R PAS
Sbjct: 125 DEFAMGSSTENSAFFTTRNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPAS 184
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+C + G +PS+ VS G++ A S D +G F D V + D + P
Sbjct: 185 FCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKDVLDCALVMNAIAGFDDRDSTSVPQT 244
Query: 204 VIFAEDCLQLS------SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
V CL +P + +Q + + + + LG S+ H
Sbjct: 245 VPDFSSCLDGDIKGFKLGVPKEYFSQNMRADIAEKINDALSVLSGLG-------ASVDHE 297
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYE-------FKNNHGDWVTTVK---PDLGPGIS 307
+S + ++ + A S A L RY+ + W K GP +
Sbjct: 298 VSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGPEVK 357
Query: 308 ERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPP----PKLQ 358
R+ SA D Q V+T + + + L+ PT P P KL
Sbjct: 358 RRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEKYDALITPTTPNLPFSIGEKLS 417
Query: 359 MDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
DP E++ ++ ++IAG+ +SIP G D LPV + ++ K +D ++ +
Sbjct: 418 -DP--FEMYMCDTCTIPINIAGLPA---ISIPAGFVDGLPVGLQIIGKPFADQTIMRIAH 471
Query: 418 TLH 420
Sbjct: 472 AFQ 474
>gi|429743346|ref|ZP_19276911.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria sp. oral taxon 020 str. F0370]
gi|429165781|gb|EKY07815.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria sp. oral taxon 020 str. F0370]
Length = 483
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 185/431 (42%), Gaps = 65/431 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQNLLDQGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN +YG NP VPGGSS GSA + A+L SLG+DTGGS+R PAS+CGI
Sbjct: 126 MGSANENSYYGATRNPWNTAHVPGGSSGGSAAVIAARLAPASLGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G+I A S D G A Q A+D ++ + F
Sbjct: 186 TGLKPTYGTVSRFGMIAYASSLDQAGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 208 E-DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS-LQHFLS----EG 261
E D L D T+ L + ++ L G + GD + V + LQ+ + G
Sbjct: 232 ERDSTSLERENED-YTRDLNRPLKGLKIG--LPKEYFGDGCEADVKTALQNTIDLLRGMG 288
Query: 262 NKEQEYSIPSLA---------ALSSAMRLLQRY----------EFKNNHGDWVTTVKPDL 302
+ E S+P A A + A L RY EF N + T
Sbjct: 289 AETVEVSLPQTALSIPAYYVLASAEASTNLSRYDGVRYGHRAAEFANLEEMYANTRAEGF 348
Query: 303 GPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP 351
G + R+ ++A AQK+ + V + + A + +++ PT P
Sbjct: 349 GSEVKRRIMIGTYVLSHGYYDAYYIKAQKLR--RLVANDFQTAFAGC----DLILGPTAP 402
Query: 352 GPPPKLQMDPSALEVFRARAFSLLSIA-GVSGFCQVSIPLGLHDN-LPVAISLLAKHGSD 409
P Q+ + +A + +IA ++G +S+P G N LP+ + L+ H S+
Sbjct: 403 SSAP--QIGSHGGDPVQAYLSDIYTIAVNLAGLPALSLPAGFCRNGLPIGVQLIGNHFSE 460
Query: 410 GFLLNLVETLH 420
LLN +
Sbjct: 461 ARLLNAAHQIQ 471
>gi|410697813|gb|AFV76881.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Thermus oshimai JL-2]
Length = 434
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 179/413 (43%), Gaps = 57/413 (13%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGN-------PDWARTHSAATSTAPAVLAVLSGGATSIG 79
PL GL +KD+F V G T G P+ AR AV + GA
Sbjct: 64 PLHGLPLTVKDLFPVRGMPTRAGTRAPLPPLPEEAR----------AVERLREAGALLFA 113
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT M E+A I GEN G N P R GGSS GSAVAV + SLG+DTGGS+R
Sbjct: 114 KTNMHEIALGITGENPWTGPVRNALDPTRQAGGSSGGSAVAVALGIGLASLGSDTGGSIR 173
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+PA++ G+ GF+PS+ VS G +P+++S D G A + + + +L + + L
Sbjct: 174 IPAAFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPIAKTVRDAHFLTEIL--AGEAIPLE 231
Query: 200 RPSQVIFAEDCLQLSSIPSD----RVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQ 255
P F +P D R+ G+ K+ ++L + +P L+
Sbjct: 232 GPQNPTF--------GVPLDFLEGRLGVGVRKAFQRLL---------------EDLPGLR 268
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
+ +E S+P +A R L RYE H + P + + E ++
Sbjct: 269 ------AEVREVSLPLRSAYEVYTR-LTRYEAARIHEKALKEHPEGFSPQVRLALEEGLK 321
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE---VFRARAF 372
+ + + + LR L+ L L++PT P P P L + LE AF
Sbjct: 322 LTEKDYRDAVAEREALRLELAKALRGVDALLLPTQPLPAPPLGTEVVELESGPKSHREAF 381
Query: 373 SLLSIA-GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
L++ + G +++ + +PV + ++ +G DG +L + L L+
Sbjct: 382 ITLTLPFSLLGVPTLTLTFARVEGMPVGVQVVGPYGEDGRVLAIGGWLEARLR 434
>gi|425457005|ref|ZP_18836711.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9807]
gi|389801772|emb|CCI19114.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9807]
Length = 443
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 178/402 (44%), Gaps = 38/402 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD+ G VT G+ R H AA A A+ + + GA +G T MDE A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NPC P RV GGSS GSA AV A LV +LG+DT GSVRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATPNPCDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQVI 205
G +P+ VS G+ S D +G+F+ + + + + + L ++ + ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLSGLEGVKIA 246
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A+D Q + P V + V ++ + FG V K+
Sbjct: 247 LADDYFQQGAEPE--VFEA-VTAIAERFG------------VTKKI-------------- 277
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+IP A +A ++ E N H + T D P +R + Q
Sbjct: 278 --TIPETARARAAAYIITAAEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQ 335
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGVS 381
+ R L + + I++ PT+P P L ++ ++ + R
Sbjct: 336 RFRRWYRDRLREIFTEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPFSFI 395
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L + L L
Sbjct: 396 GLPALSLPIKRPSQLPLGLQIIAAPDREDLILRVARVLEEML 437
>gi|332530839|ref|ZP_08406765.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332039751|gb|EGI76151.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 442
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 180/396 (45%), Gaps = 46/396 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA--ATSTAPAVLAVLSGGATSIGKTIMD 84
PL+GL+ ++KD+F+V T G+ H A A S + AV + + GA IG+T M
Sbjct: 62 PLAGLSVSVKDLFNVRDQTTAAGS---LVLHQAPVAQSDSTAVARLRAAGAAFIGRTNMS 118
Query: 85 EMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E A+S G N H+GTP+NP D R+PGGSSSG+AV+V LG+DTGGS+R+PA
Sbjct: 119 EFAFSGVGINPHHGTPSNPAYTDQPRIPGGSSSGAAVSVAIGASFIGLGSDTGGSIRIPA 178
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ G+ GF+ + V T G +P++ + DTV I V +L V P
Sbjct: 179 ALQGLVGFKSTARLVPTDGALPLSSTLDTVC------AITRSVRDAILAHEILSARVVPR 232
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLSEG 261
DC ++P + L V + F + LG VKD +P L
Sbjct: 233 LKKTLGDC--RFAVPRTLMLDDLEPPVARAFDRALQTLRSLGAQVKDITLPEL------- 283
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHG---DWVTTVKPDLGPGISERVWEAVRTSA 318
E+ +I S S+A E G D ++ + G G+S W
Sbjct: 284 --EELSAINSTGGFSAAESYAWHRELLMTQGTLYDPRVKLRMERGAGMS--AW------- 332
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALE---VFRARAFSL 374
Q I++ Q+ +R SA+ G + L+ PTVP P + Q+ P FR L
Sbjct: 333 QYIELTQARHDWIRRMTSAIEG-YDALLSPTVPMLAPTIAQVAPGPERDDAFFRVNGLLL 391
Query: 375 L--SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGS 408
S+ + C +S+P + PV + L HG+
Sbjct: 392 RNPSVVNMLDGCAISLPCQAPGDAPVGLMLW--HGA 425
>gi|435850549|ref|YP_007312135.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Methanomethylovorans hollandica DSM 15978]
gi|433661179|gb|AGB48605.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Methanomethylovorans hollandica DSM 15978]
Length = 475
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 182/452 (40%), Gaps = 84/452 (18%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVT--------GFGNPDWARTHSAATSTAPAVLAVLSGGA 75
H PL+G+ AIKD G T G+ P A + + GA
Sbjct: 57 HNGPLAGIPIAIKDNISTKGISTTCSSKILQGYVPP----------YDAHIIERLKDAGA 106
Query: 76 TSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTG 135
+GKT MDE A + E+ YG NP +RVPGGSS GSA V A S+G+DTG
Sbjct: 107 IILGKTNMDEFAMGTSTESSCYGPTLNPWDMERVPGGSSGGSAAVVAAGEAPISVGSDTG 166
Query: 136 GSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADD 195
GSVR PA++CG+ G +P++ +S G+I A S L ++G + ++D
Sbjct: 167 GSVRCPAAFCGVVGLKPTYGTISRYGLISYANS-------------LEQIGPLATCVSDI 213
Query: 196 VNLVRPSQVIFAEDCLQLSSIPSDRVTQ-GLVKSVEKL--------FGGHI---IENVIL 243
L+ VI D +SI ++ V + L V L FG I +EN +
Sbjct: 214 ATLM---DVIGGHDARDSTSIKTETVYKDALADDVSGLKIGVPAEYFGAGIDPAVENSVW 270
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPS---------LAALSSAMRLL-----QRYEFKN 289
++Q F G ++ S+P + A+S A L RY ++N
Sbjct: 271 --------DAIQLFEEMGASWEQVSLPHTSYALAAYYIIAMSEASSNLARFDGTRYGYRN 322
Query: 290 NHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV---------CQSVKTELRAALSALLG 340
+W G V + + V+T ++
Sbjct: 323 EGENWHVMASRTRAEGFGAEVKRRILLGTYALSAGYHDKYYLKALKVRTLVKQDFDLAFK 382
Query: 341 DHGILVIPTVPGPPPKLQ---MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLP 397
+ L+ PT+P P KL DP AL + +++AGV +S+P G D LP
Sbjct: 383 EFDCLITPTMPTPAFKLGEKVEDPLALYLADVNTVP-INLAGVP---SISLPCGFTDGLP 438
Query: 398 VAISLLAKHGSDGFLLNLVETLHNTLKEELQR 429
+ + ++ KH + +L + + +R
Sbjct: 439 IGLQIIGKHFDEATILKAAYSFEQNTEHHTRR 470
>gi|167899727|ref|ZP_02487128.1| indole acetimide hydrolase [Burkholderia pseudomallei 7894]
gi|167924241|ref|ZP_02511332.1| indole acetimide hydrolase [Burkholderia pseudomallei BCC215]
Length = 447
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 48 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 105
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 106 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 164
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 165 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 219
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 220 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 271
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 272 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 329
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 330 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 387
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 388 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 445
>gi|358062323|ref|ZP_09148969.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
hathewayi WAL-18680]
gi|356699452|gb|EHI60966.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
hathewayi WAL-18680]
Length = 506
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 197/442 (44%), Gaps = 73/442 (16%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ AIKD +G +T + + + TA AV + GA +GKT MDE
Sbjct: 70 PLAGVPVAIKDNLCTEGLLTTCAS--RILENFVPSYTAEAVRNLEKAGAVILGKTNMDEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E YG NP + VPGGSS GS AV A+ ++LG+DTGGS+R P+SYCG
Sbjct: 128 AMGSTTETSAYGVTRNPWNLEHVPGGSSGGSCAAVAAEECFYALGSDTGGSIRQPSSYCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G +P++ VS G++ S D +G A D + D ++ +VI
Sbjct: 188 VVGIKPTYGTVSRYGLVAYGSSLDQIGPIAKD-------------VTDCATIL---EVIS 231
Query: 207 AEDCLQLSSIPSD--RVTQGLVKSVEKLFGG----HIIENVILGDYVKDKV-PSLQHFLS 259
+ D +S+ D + T LV V+ + G + IE + G V+D + + F
Sbjct: 232 SYDNKDSTSVKRDDYQFTSALVDDVKGMRIGIPRDYFIEGLDSG--VRDAILAAADTFRK 289
Query: 260 EGNKEQ-------EYSIPS--LAALSSAMRLLQRY----------EFKNNHGDWVTTVKP 300
+G + EY++P+ + A + A L R+ E++ H + +
Sbjct: 290 KGAVVEEFDLGLVEYAVPAYYVIATAEASSNLSRFDGVKYGHRAKEYEGLHSMYKKSRSE 349
Query: 301 DLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
GP + R+ ++A A K K ++ A ++ +++ P
Sbjct: 350 GFGPEVKRRIMLGSFVLSSGYYDAYYLKALK------TKALIKKAFDRAFENYDVILAPV 403
Query: 350 VPGPPPKLQ---MDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDN-LPVAISLLA 404
P PKL DP ++++ A +++ +++AG+ G +++P G N LP+ + ++
Sbjct: 404 APTTAPKLGASLTDP--MKMYLADIYTISVNLAGLPG---MTVPCGKDKNGLPIGLQIIG 458
Query: 405 KHGSDGFLLNLVETLHNTLKEE 426
+ ++ T T E
Sbjct: 459 NCFDEKIVIRAGYTFEQTRTYE 480
>gi|374365839|ref|ZP_09623925.1| copper-translocating P-type ATPase [Cupriavidus basilensis OR16]
gi|373102493|gb|EHP43528.1| copper-translocating P-type ATPase [Cupriavidus basilensis OR16]
Length = 954
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWART--HSAATSTAPAVLAVLSGGATSIGKTIMD 84
PLSGL ++KD+FDV G VT G AR A + A A+ + + GA +G+T M
Sbjct: 59 PLSGLPISVKDLFDVQGDVTRAG----ARVLPEQVAAADAAAIARLRAAGAVFVGRTNMT 114
Query: 85 EMAYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E AYS G N HYGTP NP A R+PGGSSSG+AV+V + ++G+DTGGS R+PA
Sbjct: 115 EFAYSGVGINPHYGTPRNPFERAVGRIPGGSSSGAAVSVTDGMAVAAIGSDTGGSCRIPA 174
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
+ CGI GF+P+ V G +P++ S+D++G A + RV+ D RP
Sbjct: 175 ALCGIVGFKPTARRVPLQGTVPLSPSYDSIGCLARTVACCAALDRVMADEPDGPVAARP 233
>gi|167725148|ref|ZP_02408384.1| indole acetimide hydrolase [Burkholderia pseudomallei DM98]
Length = 442
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 43 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLCFDATRNATAVQQLLDAGAVPLGK 100
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 101 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 159
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 160 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 214
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 215 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 266
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 267 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 324
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 325 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 382
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 383 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 440
>gi|418544495|ref|ZP_13109780.1| indole acetimide hydrolase [Burkholderia pseudomallei 1258a]
gi|418551341|ref|ZP_13116259.1| indole acetimide hydrolase [Burkholderia pseudomallei 1258b]
gi|385348248|gb|EIF54878.1| indole acetimide hydrolase [Burkholderia pseudomallei 1258b]
gi|385348676|gb|EIF55275.1| indole acetimide hydrolase [Burkholderia pseudomallei 1258a]
Length = 467
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 183/418 (43%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 68 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 125
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 126 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 184
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV ++ + DTVG A L + VL A +
Sbjct: 185 PAAFCGVAGLRPTPRRYSTEGVFALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 239
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 240 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 291
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 292 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 349
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 350 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 407
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 408 RVIRQTGPATLGGVPSVSIPAGLSKHTGMPVGLMLEGPAGNDRRLLAIAREVERLLAR 465
>gi|440742154|ref|ZP_20921483.1| hypothetical protein A988_02191 [Pseudomonas syringae BRIP39023]
gi|440377977|gb|ELQ14611.1| hypothetical protein A988_02191 [Pseudomonas syringae BRIP39023]
Length = 457
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 184/417 (44%), Gaps = 54/417 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTH-SAATSTAPAVLAVLSGGATSIGKTIMDE 85
P G+ A KD+FDV G VT G R + S A AP+V + G S+GKT + E
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGA--AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSE 129
Query: 86 MAYSINGENKHYGTPTNPCA--PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
AYS G N H+GTP NP + R+PGGSSSGSAVAV V ++GTDT GS+RVPA+
Sbjct: 130 FAYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAA 189
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
G+ GFR + S GV P+A + D+VG VR +
Sbjct: 190 LNGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS--------------------VRDAL 229
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
VI +D L S PS + + L L ++E+ + V+D + L
Sbjct: 230 VI--DDLLCARSKPSSLIPRSLAGQ-RFLLDQAVLEDERVTPAVRDNLLRAVEALRASGA 286
Query: 264 EQEYSIPSLAALSSAMRLLQRY-------EFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
E + A + + L Q++ F + + L P + +R+ A
Sbjct: 287 LIE--VKPCQAFQATLLLTQQHGWLGAAEAFALHQALLDSDAASQLDPRVRKRLEAARSM 344
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP--GPP--PKLQMD----PSALEVFR 368
A + + + L+ L+ L D +L+ PTV PP P L+ D + L R
Sbjct: 345 PASLLVNLYAARERLQEQLTLEL-DGALLITPTVAHVAPPLAPLLKDDDLFVQTNLATLR 403
Query: 369 -ARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
SLL+++G VS+P G LP + L A G D LL T+ + +
Sbjct: 404 LTMPGSLLNMSG------VSLPSGRDASGLPTGLLLSAPAGEDARLLRAALTVESLI 454
>gi|217422358|ref|ZP_03453861.1| amidase family protein [Burkholderia pseudomallei 576]
gi|217394589|gb|EEC34608.1| amidase family protein [Burkholderia pseudomallei 576]
Length = 551
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 184/416 (44%), Gaps = 33/416 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 152 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 209
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 210 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 268
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 269 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 323
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 324 PAPVALA--GLRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 375
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 376 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 433
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 434 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 491
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 492 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLL 547
>gi|86751165|ref|YP_487661.1| allophanate hydrolase [Rhodopseudomonas palustris HaA2]
gi|86574193|gb|ABD08750.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 599
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 178/412 (43%), Gaps = 50/412 (12%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ A+KD DV G T P +A A STA A L + GA IGKT +D+
Sbjct: 62 LPLYGVPVAVKDNIDVAGLPTTAACPAFAY-QPAQDSTAVAKLR--AAGAIIIGKTNLDQ 118
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG P N D VPGGSSSGSAVAVGA LV SLGTDT GS RVPA
Sbjct: 119 FATGLVGVRSPYGIPRNAMRADLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLN 178
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRVGRVLLQLADDVNLVRPS 202
I G +PS +ST G++P ++ D + FA D I RV D + RP
Sbjct: 179 NIVGLKPSLGLISTTGLVPACRTLDCISVFALTVDDAMIALRVMGT-PDATDPYSRARP- 236
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+S++P DR G+ + + F G D +LQ + S G
Sbjct: 237 -------IAPMSAMP-DRPRLGVPRPDQLQFFGDQQSEQAYAD-------ALQRWTSLGA 281
Query: 263 KEQEYSIPSLAALSSAMRLL-------QRY----EFKNNHGDWVTTVKPDLGPGISERVW 311
+ E + A L RLL +RY E + D + V + G
Sbjct: 282 ELIEIDV---APLYETARLLYDGPWVAERYLAIRELIDATPDALHPVTRQITLGGKAISA 338
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM--DPSALEVFRA 369
+ ++ + + AA+ A LV+PT P Q+ DP L +
Sbjct: 339 ADTFAALYRLQALRKLAEPAFAAIDA-------LVLPTAPTAYTVEQVLADPVTLN---S 388
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
R + + + C ++IP + D +P ++LLA G D L +L H
Sbjct: 389 RLGTYTNFVNLLDLCGLAIPASIRADGIPFGVTLLAPGGRDAELASLGRMFH 440
>gi|241764756|ref|ZP_04762765.1| Amidase [Acidovorax delafieldii 2AN]
gi|241365746|gb|EER60418.1| Amidase [Acidovorax delafieldii 2AN]
Length = 448
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 191/421 (45%), Gaps = 51/421 (12%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL+GL ++KD+FD+ G T G+ A + A PAV + + G IG+T M E
Sbjct: 59 LPLAGLAVSVKDLFDIAGQPTTAGSTVLAGA-APAQQDCPAVARLRAAGGMVIGRTNMVE 117
Query: 86 MAYSINGENKHYGTPTN--------PCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
A+S G N H+GTP P AP R+PGGSSSG+AV+V LG+DTGGS
Sbjct: 118 FAFSGVGVNPHFGTPAAWDGRFGALPGAP-RIPGGSSSGAAVSVATGAAFVGLGSDTGGS 176
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R+PA+ GI GF+ + V TAG IP++ + DT A + + V V+ ++
Sbjct: 177 IRIPAALNGIVGFKNTARLVPTAGAIPLSTTLDTA--CAMTRSVRDAV--VVHEVLAARR 232
Query: 198 LVR-PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
+ R P+ + F ++PS L +V + F +L
Sbjct: 233 VTRSPAPLRFWR-----LAVPSTTFLDNLDATVAQAFSR-----------------TLDA 270
Query: 257 FLSEGNKEQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWE-A 313
G +E ++P L A L E H + P + R+ A
Sbjct: 271 LRRAGAHIEEIALPLTEELGPMQARGGLSAAESHAWHRPLLARQASQYDPRVRSRIERGA 330
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSA---LEVFRA 369
+A ID+ Q+ + A + A L + L+ PTVP P + ++ P + E FR
Sbjct: 331 TMAAADYIDLLQA-RQHWIARMEAALAPYDALLSPTVPMVAPTIAEVAPGSERDAEFFRV 389
Query: 370 RAFSLLSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGS--DGFLLNLVETLHNTLKE 425
A L + + V+ C +S+P + LPV L+ HG+ D +LN+ + L++
Sbjct: 390 NALLLRNTSVVNMLDGCALSLPCHVAGELPV--GLMVWHGAMHDDAVLNVSLQIERILQK 447
Query: 426 E 426
+
Sbjct: 448 Q 448
>gi|325261862|ref|ZP_08128600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5]
gi|324033316|gb|EGB94593.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5]
Length = 491
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 196/429 (45%), Gaps = 71/429 (16%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGN---PDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PL+G+ A+KD ++G +T + D+ + TA AV+ + GA IGKT M
Sbjct: 70 PLAGVPVAVKDNLCIEGQLTTCSSRILSDFKPVY-----TAEAVMNLQKAGAVIIGKTNM 124
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A E YG NP P VPGGSS GS AV A+ ++LG+DTGGS+R P+S
Sbjct: 125 DEFAMGSTTETSFYGPTKNPHNPAHVPGGSSGGSCAAVAAQECWYALGSDTGGSIRQPSS 184
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA----DDVNLV 199
+CG+ G +P++ VS G+I S D +G A D ++ V+ +A D V
Sbjct: 185 FCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPVAKD---VSDCAAVMEAIASHDPKDSTSV 241
Query: 200 RPSQVIFA----EDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
+ F +D L IP+D + +GL K V+ + D +K++ +
Sbjct: 242 KRKDYDFCSALVDDVKGLKIGIPADYMGEGLDKEVKDAV-------LKAADVLKERGAVV 294
Query: 255 QHF-LSEGNKEQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPD 301
+ F LS +Y+IP+ ++SA L+R+ ++ H + T
Sbjct: 295 ETFDLS----LVQYAIPAYYVIASAEASSNLERFDGVKYGYRTQDYDGLHNMYKKTRSEG 350
Query: 302 LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
G + R+ ++A A + K ++ A ++ +++ P
Sbjct: 351 FGAEVKRRIMLGSFVLSSGYYDAYYLKALR------TKALIKQAFDRAFENYDVILGPAA 404
Query: 351 PGPPPKLQM---DPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDN-LPVAISLLAK 405
P P+L DP L+++ +++ +++AG+ G +S+P+G LP+ + L+A
Sbjct: 405 PTTAPELGKSLSDP--LKMYLGDIYTVAVNLAGLPG---MSVPVGKDSRGLPIGMQLIAS 459
Query: 406 HGSDGFLLN 414
+ LL
Sbjct: 460 CFQEKTLLR 468
>gi|241518431|ref|YP_002979059.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862844|gb|ACS60508.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 447
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 96/154 (62%), Gaps = 5/154 (3%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A+KD+ D+ G VT G+ + R + A A V ++ G SIGKT +
Sbjct: 60 PLSAFDGVPIAVKDLLDIAGTVTTAGS-EIRRNLAPAREDAEVVSSIHGVGLISIGKTNL 118
Query: 84 DEMAYSINGENKHYGTPTNPCAPD-RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E A+S G N H+GTP AP+ RVPGGSSSGSA+AV +V ++G+DT GS+RVPA
Sbjct: 119 SEFAFSGLGINPHFGTPIPGYAPEQRVPGGSSSGSAIAVERGVVLAAIGSDTAGSIRVPA 178
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
++ G+ GFRPS GV P+A SFDT+G A
Sbjct: 179 AFNGLHGFRPSTGRYPMRGVHPLASSFDTLGPIA 212
>gi|134278756|ref|ZP_01765470.1| amidase family protein [Burkholderia pseudomallei 305]
gi|134250540|gb|EBA50620.1| amidase family protein [Burkholderia pseudomallei 305]
Length = 558
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 159 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 216
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 217 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 275
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV+ ++ + DTVG A L + VL A +
Sbjct: 276 PAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 330
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 331 PAPVALA--GLRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 382
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 383 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 440
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 441 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 498
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 499 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 556
>gi|354594428|ref|ZP_09012467.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Commensalibacter intestini A911]
gi|353672104|gb|EHD13804.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Commensalibacter intestini A911]
Length = 449
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 178/393 (45%), Gaps = 38/393 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ F +KD+FDV G VT G+ ++ ++ A A + + + GA + MDE
Sbjct: 66 PLVGVPFGVKDLFDVKGEVTTAGSKLLSQ-NNPANQDAKVIQRLCAAGAIPVATLNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY +N+H+G NP R GGSS GSA +VG ++ FSLG+DT GS+RVPAS+CG
Sbjct: 125 AYGFVTDNEHHGMTHNPHDFSRFAGGSSGGSAASVGGGILSFSLGSDTNGSIRVPASFCG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP++ + GV P A+SFD +G F + L V V+ ++ + +
Sbjct: 185 VWGIRPTYGVLPMQGVYPFAESFDRIGPFCQSIEDLKTVFNVMAEVTTNTS--------- 235
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
SI S R+ Q L E+ D +D + ++Q + +K+ +
Sbjct: 236 ------FPSISSLRIGQ-LAGWFER-------------DVDQDILDAIQEIVRCFSKQGK 275
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P + + +A L+ E H + T + P ER+ +
Sbjct: 276 IDLPHIEQVRAASYLMTASEGGKLHLPNLRTKPMEYDPATRERLMAGALLPVSSYLKAKE 335
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV----FRARA-FSLLSIAGVS 381
++ + L + ++ +L+ P V P Q+D + V AR + +
Sbjct: 336 IQFWFQQYLDNIFKEYDLLIAPAVGSIAP--QIDNPVVFVDGKPVSARVNLGIYTQPFSM 393
Query: 382 GFCQV-SIPLGLHDNLPVAISLLAKHGSDGFLL 413
C V S+P+ LP+ + L+AK + L
Sbjct: 394 SHCPVLSVPIHRDGKLPIGLQLIAKPHQEQLLF 426
>gi|92118200|ref|YP_577929.1| amidase [Nitrobacter hamburgensis X14]
gi|91801094|gb|ABE63469.1| Amidase [Nitrobacter hamburgensis X14]
Length = 449
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 180/411 (43%), Gaps = 45/411 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P +G+ +IKD+FD+ G V+ G+ AA AP V + G IG+T M E
Sbjct: 70 PFAGIPVSIKDLFDIKGQVSRAGSRALDDAPPAAND-APVVARLRRAGFVVIGRTNMTEF 128
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP N D VPGGSSSG+AV++ + +LGTDTGGS R+PA+Y
Sbjct: 129 AYSGLGINPHYGTPKNRWQRDVGHVPGGSSSGAAVSITDGMAHGALGTDTGGSCRIPAAY 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CGI G++P+ + G +P++ + D+ G A + VL + + V P V
Sbjct: 189 CGIVGYKPTARRIPLDGGVPLSVTLDSYGPIARSVGCCAAMDAVLAD--EPIAPVVPRPV 246
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLF---------GGHIIENVILGDYVKDKVPSLQ 255
L+L ++P+ + L +V + F G +IE + + ++ +
Sbjct: 247 ----KGLRL-AMPTTVMLDDLSSAVARAFEHALDRLANAGAVIERIAVPEFAE------- 294
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
++ N +S A A+ + ++ E + P + R+
Sbjct: 295 --VAARNVGGGFSAAESWAWHRAL-IAKKAELYD--------------PRVISRIRHGES 337
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL 375
SA +V+ + A + + L+ PTV PP + +A SL
Sbjct: 338 LSAADYVDLLAVRRAIIAGFERRVAPYDALIAPTVAITPPVIADLAHDAAYAKANMLSLR 397
Query: 376 SIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ A ++ C +S+P PV + L A GSD + L + ++
Sbjct: 398 NCALINILDGCAISLPCHREGEAPVGLMLAAAGGSDRRIFELAAGVEPIVR 448
>gi|357033090|ref|ZP_09095022.1| amidase [Gluconobacter morbifer G707]
gi|356413450|gb|EHH67105.1| amidase [Gluconobacter morbifer G707]
Length = 445
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 174/400 (43%), Gaps = 41/400 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F IKD+FDV G VT G+ A + AT A V +++ GA + T MDE A
Sbjct: 71 LAGVPFGIKDLFDVRGQVTTAGSKVLA-DNPPATEDAVLVARLIAAGAIPVALTNMDEFA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y +N H+G NP APD + GGSS GSA V A+L LG+DT GS+RVPAS CGI
Sbjct: 130 YGFATDNAHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPASLCGI 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R + + G P S DTVG F D + ++ A
Sbjct: 190 WGLRATQGRLPVKGSYPFVASLDTVGPF-----------------GDSASGLKTCFEALA 232
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
L+ ++ R+ + GG EN + ++ + L L N E+
Sbjct: 233 GTTLEPVTVGELRIGR---------LGGWFAEN--MSAPMQAAIDGLASAL---NVERTV 278
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+P +A +A ++ E H + + D P + +R+ A I +
Sbjct: 279 DVPEVARARAAAFVISASEGAGLHLERLRRRAQDYDPAVRDRLLAGALLPATLIFQAHRL 338
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV------FRARAFSLLSIAGVS 381
+ RA + D IL+ P V G P+ D +EV RA ++
Sbjct: 339 RNWFRARMHEAFSDTDILIAPAVVGESPRF--DQPLIEVGGEKVSARANLGFYTQPLTLA 396
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
GF +++PL + LP+ L+A+ G + L L E L
Sbjct: 397 GFPVLTVPLDV-PGLPLGAQLVARPGREDQLFALGEALEQ 435
>gi|86750696|ref|YP_487192.1| amidase [Rhodopseudomonas palustris HaA2]
gi|86573724|gb|ABD08281.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 449
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 171/404 (42%), Gaps = 31/404 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P +G+ +IKD+FD+ G VT G+ + A APAV + G IG+T M E
Sbjct: 70 PYAGIPVSIKDLFDIRGQVTRAGSRAL-DDNPPAEDDAPAVARLRRAGFVVIGRTNMTEF 128
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP + D VPGGSSSG+AV+V + LGTDTGGS R+PA++
Sbjct: 129 AYSGIGINPHYGTPKSAYGRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRIPAAF 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
GI G++PS V G +P++ S D++G A + VL
Sbjct: 189 NGIVGYKPSQQRVPRDGAVPLSFSLDSIGPLARSVACCAVLDAVLAD------------- 235
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
E+ + L+ P +GL +V ++ + + + +L+ G
Sbjct: 236 ---EEIVPLAPRP----LKGLRLAVPTTVALDELDEAVRLAFER----ALKALAGHGAII 284
Query: 265 QEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
++ +P ++ SA L E H + P + ER+ SA
Sbjct: 285 EKIEVPEFNDVAPLSAKGGLTAAESYAWHRYLIVAQGDVYDPRVRERILRGESQSAADYV 344
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLSIAGV 380
+ + L A + L + +V+PT PP + D A A ++ +
Sbjct: 345 DTITARKSLIARATTRLAPYDAVVMPTTANTPPAIADLADDKAFTKANLLALRNCTLINM 404
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C +S+P PV + + +G+D + + + L+
Sbjct: 405 IDGCAISLPCHQDGEAPVGLMVAGVNGADRDVFEVAAGVEAVLR 448
>gi|254194391|ref|ZP_04900823.1| amidase family protein [Burkholderia pseudomallei S13]
gi|254300773|ref|ZP_04968217.1| amidase family protein [Burkholderia pseudomallei 406e]
gi|157811006|gb|EDO88176.1| amidase family protein [Burkholderia pseudomallei 406e]
gi|169651142|gb|EDS83835.1| amidase family protein [Burkholderia pseudomallei S13]
Length = 454
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 183/418 (43%), Gaps = 33/418 (7%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+S +LPL+G+ F IKD T +P A AT A AV +L GA +GK
Sbjct: 55 ASGRRLPLAGVPFVIKDNLFTADMPTRAASP--ALLGFDATRNATAVQQLLDAGAVPLGK 112
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
M E+A+ I N ++G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+
Sbjct: 113 ANMHELAFGITSANGYFGAVRNPHDPARIAGGSSGGTACAVAAGIA-FGLGTDTGGSVRI 171
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
PA++CG+ G RP+ ST GV ++ + DTVG A L + VL A +
Sbjct: 172 PAAFCGVAGLRPTPRRYSTEGVFALSPTRDTVGPIAHGIDDLLLLDAVLTGDAGE----- 226
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI--LGDYVKDKVPSLQHFL 258
P+ V A L++ +P GL +V +L E + L D +P H L
Sbjct: 227 PAPVALAG--LRV-GVPDAPYFDGLDPAVAEL-----TERALAALTDAGARLIPLAAHAL 278
Query: 259 SEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
E ++ + I AL+ R +R + ++V + D + + +A +S
Sbjct: 279 HEADEACGFPIAGFEALAYWRRFSAERLDLP--FAEFVARLGSDDVRHLFRMLIDAPPSS 336
Query: 318 ---AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A IDV QS A D + +PTV P + + A
Sbjct: 337 DAYAAAIDVLQSTVRWYDQAFHRTGVD--CIALPTVQCDAPLVTDSGHDLPSDAAYALFT 394
Query: 370 RAFSLLSIAGVSGFCQVSIPLGL--HDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
R A + G VSIP GL H +PV + L G+D LL + + L
Sbjct: 395 RVIRQTGPATLGGVPSVSIPAGLSKHTGVPVGLMLEGPAGNDRRLLAIAREVERLLAR 452
>gi|335038649|ref|ZP_08531871.1| Amidase [Caldalkalibacillus thermarum TA2.A1]
gi|334181460|gb|EGL84003.1| Amidase [Caldalkalibacillus thermarum TA2.A1]
Length = 488
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 187/421 (44%), Gaps = 34/421 (8%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST--APAVLAVLSGGATSI 78
S ++ PL G+ AIKDI VT G ++ H S+ A V + G
Sbjct: 81 SGNYRGPLHGIPMAIKDIIYFANEVTTMG----SKIHQNFKSSYDATVVKKLTQAGVIFT 136
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GK + E A+ N H+G NP +R+ GGSS GS VA + + +L TDTGGS+
Sbjct: 137 GKLNLHEYAWGATNNNPHFGPCRNPWDVERISGGSSGGSGVAPASHMTIAALRTDTGGSI 196
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R+P+S+CGI G +P+H VS G P+A S D +G K VL +A +
Sbjct: 197 RIPSSFCGIVGLKPTHGLVSKYGCFPLAWSLDHIGPMT---KTAKDAAYVLEAIA-GYDP 252
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGG----HIIENV--ILGDYVKDKVP 252
P+ + ++P+ + ++ L SV+ L G + NV + V++ +
Sbjct: 253 KDPTSI----------NVPTPKYSEELTGSVKGLRIGINEEYFFNNVDSEVEKTVRNAIL 302
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
SL+ EG + ++P+L A + E H + + + D G + +
Sbjct: 303 SLE---KEGAVIETVNVPALQYAEYAEMITIISEASTIHHNNLIAREEDFGDDVRFLLKL 359
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL---EV-FR 368
SA Q ++ +L + +L+ PT+P PPK+ D L EV F
Sbjct: 360 GEIPSAVDYLQAQQIRLQLDREFKEMFNKVDVLITPTLPFLPPKIGQDTVLLNGNEVNFL 419
Query: 369 ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQ 428
++G V++P G ++LPV + ++ +G +LN+ +T L EL+
Sbjct: 420 DHIIRFTGPFNLTGLPAVTVPCGFVNDLPVGMQIVGPAFQEGRILNVADTFEK-LHPELK 478
Query: 429 R 429
R
Sbjct: 479 R 479
>gi|343083167|ref|YP_004772462.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cyclobacterium
marinum DSM 745]
gi|342351701|gb|AEL24231.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Cyclobacterium
marinum DSM 745]
Length = 477
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 189/411 (45%), Gaps = 59/411 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ IKD+ + H + + S T TA V ++ A IG+ DE
Sbjct: 68 LAGMVIGIKDVLCYNEHESNASSKILEGFESQFTGTA--VQRLIDEDAIIIGRLNCDEFG 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ EN +G N RVPGGSS GSAVAV A L SLGTDTGGSVR PA++ G+
Sbjct: 126 MGSSNENSVHGKVLNAIDETRVPGGSSGGSAVAVQANLCTVSLGTDTGGSVRQPAAFTGV 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA--DD---------- 195
G +P++S VS G+I A SFDT+G F+ + K VL +A DD
Sbjct: 186 IGIKPTYSRVSRFGLIAYASSFDTIGVFSNNVK---DNALVLETMAGPDDYDSTSSRKPV 242
Query: 196 ------VNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLF-GGHIIE--NVILGDY 246
++ +P+++ + ++ + ++ + + + +EKL GH +E N L DY
Sbjct: 243 PAYSKLLHFDKPAKIAYLKETVHSEALQPE-IKANTLNVLEKLKEEGHKVEEVNFPLLDY 301
Query: 247 V---------KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT 297
V + +L F +G K Y P+ L S +L + F G+ V
Sbjct: 302 VLPTYYILTTAEASSNLSRF--DGVK-YGYRTPNAHNLESMYKLTRSEGF----GEEVKR 354
Query: 298 VKPDLGPGI-SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
+ LG + S ++A T AQK V+ ++ LL + +V+PT P K
Sbjct: 355 -RIMLGTFVLSASYYDAYFTKAQK------VRKLIKDYTEDLLTKYDYIVLPTTPSTAFK 407
Query: 357 L---QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLL 403
DP A+ + F++ A VSG +SIP G D LP+ + ++
Sbjct: 408 FGEHSNDPVAM--YLEDLFTVQ--ASVSGVPSISIPNGKDDKGLPIGLQIM 454
>gi|284045816|ref|YP_003396156.1| amidase [Conexibacter woesei DSM 14684]
gi|283950037|gb|ADB52781.1| Amidase [Conexibacter woesei DSM 14684]
Length = 416
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Query: 9 GAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVL 68
GA ++ S + PL+G+T A+KD+ V G G G+ R +A ++
Sbjct: 34 GADLDAARSTARSRSATRPLAGITVAVKDLVAVAGQPLGAGSA--VRADAAPEPADAPIV 91
Query: 69 AVLSG-GATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
A L GAT +G + E A+ + G N GTP NP A +PGGSSSGSAVAV
Sbjct: 92 ARLRACGATIVGLVTLHEFAFGVTGLNAWAGTPENPRAAGCIPGGSSSGSAVAVADGSAR 151
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAV-STAGVIPMAQSFDTVGWFA 176
++GTDTGGSVR+PA+ CG+ GF+PS S T GV P+A S DTVG A
Sbjct: 152 VAIGTDTGGSVRIPAALCGVAGFKPSGSTTYPTTGVFPLAPSLDTVGTLA 201
>gi|166365160|ref|YP_001657433.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis
aeruginosa NIES-843]
gi|166087533|dbj|BAG02241.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis
aeruginosa NIES-843]
Length = 438
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 174/402 (43%), Gaps = 38/402 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD++G VT G+ R H A A A+ + + GA +G T MDE A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP P RV GGSS GSA AV A LV +LG+DT GSVRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATANPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQVI 205
G +P+ VS G+ S D +G+F+ + + + + + L +N + ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWGLFAKNNLKAPLNGLEGVKIA 246
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A+D Q + P V + ++ E+L +
Sbjct: 247 LADDYFQQGAEPE--VIESVIAIAERL-----------------------------GVTK 275
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ +IP +A ++ E N H + T D P +R + Q
Sbjct: 276 KITIPETVRARAAAYIITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQ 335
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGVS 381
+ R L + + I++ PT+P P L ++ ++ + R
Sbjct: 336 RFRRWYRDRLREIFSEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPFSFI 395
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L + L L
Sbjct: 396 GLPALSLPIKRPSQLPLGLQIIAAPDREELILRVARVLEEML 437
>gi|434397558|ref|YP_007131562.1| amidohydrolase, AtzE family [Stanieria cyanosphaera PCC 7437]
gi|428268655|gb|AFZ34596.1| amidohydrolase, AtzE family [Stanieria cyanosphaera PCC 7437]
Length = 457
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 177/415 (42%), Gaps = 54/415 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FDV G +T + +S A A A+ + GA +G MDE A
Sbjct: 66 LAGVPFAVKNLFDVQG-ITTLAGSKINQDNSPAQEDATAIALLKQAGAILVGTLNMDEYA 124
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP R+ GGSS GSA AV A LV +LG+DT GS+RVPA+ CG+
Sbjct: 125 YGFVTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCGV 184
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+GF+P++ +S AGV S D +G FA VR +F
Sbjct: 185 YGFKPTYGRLSRAGVFLFVSSLDHIGCFARS--------------------VRDVAAVF- 223
Query: 208 EDCLQLSSIPSDRV-TQGLVKSVEKLFGGHI--IENVILGDYVKDK--------VPSLQH 256
D LQ + P D V T ++ G I + I GDY + + V ++
Sbjct: 224 -DVLQ-GADPKDPVCTHKPIQPCLSQLEGEIDHLRIAIAGDYFQQEAEPEALEVVATVAQ 281
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
L N Q +IP +A L+ E N H + + D P +R
Sbjct: 282 AL---NVRQTITIPESDRAKAAAYLITASEGANLHLHNLKSRPQDFDPATRDRFLAGALI 338
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFR----- 368
A Q + R L + +++ PT P PKL +M EV
Sbjct: 339 PASWYIQAQRFRRWYRHQLQQIFQQVDLILAPTTPCVAPKLGQTKMIIGGEEVLVRPNLG 398
Query: 369 --ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ FSL+ G +S+P+ LP+ + ++A + +L + L N
Sbjct: 399 RFTQPFSLI------GLPVLSVPVLGSKKLPLGVQIIAAPYQELLILRVAHFLEN 447
>gi|410658048|ref|YP_006910419.1| Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln)
amidotransferase subunit A [Dehalobacter sp. DCA]
gi|410661037|ref|YP_006913408.1| Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln)
amidotransferase subunit A [Dehalobacter sp. CF]
gi|409020403|gb|AFV02434.1| Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln)
amidotransferase subunit A [Dehalobacter sp. DCA]
gi|409023393|gb|AFV05423.1| Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln)
amidotransferase subunit A [Dehalobacter sp. CF]
Length = 487
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 181/415 (43%), Gaps = 50/415 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFG-------NPDWARTHSAATSTAPAVLAVLSGGATSIG 79
PL GL A+KD +G T G NP + +A T A AVL +G
Sbjct: 69 PLEGLPMAMKDNMCTEGIPTTCGSRILENFNPPY---DAAVTERLKAAGAVL------LG 119
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
K MDE A + EN Y NP + VPGGSS GSA V A+ V F+LG+DTGGS+R
Sbjct: 120 KLNMDEFAMGSSTENSGYHPTANPWDLESVPGGSSGGSAACVAAREVPFALGSDTGGSIR 179
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADD 195
PA++CG+ G +P++ AVS G++ A S D +G + + +LN + + +
Sbjct: 180 QPAAFCGVVGLKPTYGAVSRYGLVAFASSLDQIGPLTTNVRDNALVLNAIAGHDPKDSTS 239
Query: 196 VNLVRPSQVIFAEDCLQ--LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS 253
V V+P F E+ ++ IP + GL V ++ I LG ++ S
Sbjct: 240 VPFVKPDYTQFLENNVKGLKIGIPDEYFASGLNSDVAEVIQKAIRTFESLGAEIER--CS 297
Query: 254 LQHFLSEGNKEQEYSIPSL-----AALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGI 306
L H E+++P+ A SS + RY ++ D + K G
Sbjct: 298 LPH--------TEFAMPAYYIIAPAECSSNLARYDGVRYGYRAEADDMIEMFKKTREKGF 349
Query: 307 SERVWEAVRTSAQKIDV---------CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ V + + Q V+T ++ + +L+ PT P K+
Sbjct: 350 GQEVKRRIMLGTYALSSGYYDAYYLKAQKVRTLIKQDFDRAFEKYDVLLSPTAPTTAYKI 409
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFL 412
L ++ +++ ++G +S+P G D +PV + L++KH +G L
Sbjct: 410 GEKSDPLAMYMGDVYTI--PVNLAGLPAISVPAGFVDGMPVGMQLISKHFEEGTL 462
>gi|326478735|gb|EGE02745.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton equinum CBS
127.97]
Length = 627
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 176/431 (40%), Gaps = 62/431 (14%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q PL+G+ +KDIF+V G T GN W + + AA TA AV ++ GA +GK
Sbjct: 203 QKPLAGVRLGVKDIFNVKGLKTSNGNRAWYQLYPAANRTAIAVQNLIDAGAVVVGKMKTS 262
Query: 85 EMAYSINGENK-----HYGTPTNPCAPD-RVPGGSSSGSAVAVGAK-LVDFSLGTDTGGS 137
+ A NGE Y P NP + PG SS+G A A +D +LG+DTGGS
Sbjct: 263 QFA---NGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEAAYPWLDIALGSDTGGS 319
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R P+ G+FG RPSH VS G +P+A FDT G A DPK+ + L +
Sbjct: 320 IRSPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPKLWAAAAKALYGANIKMT 379
Query: 198 LVRPSQVIFAE---------DCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYV 247
PS ++ D L L I DRV + L VE G +
Sbjct: 380 KSYPSHILAVGFPTKPKSDLDVLLLGFI--DRVARFLSARVEVFDVAAAWAATYPRGSPL 437
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
V + LS KEQ L R F +H P + P
Sbjct: 438 AAIVNNTYEILSA--KEQAR--------------LVRDVFYADHAAAHGGRLPHVNPAPL 481
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHG--------ILVIPTVPGPPPKLQM 359
R W S I ++ KT + + G +L +P +P P +
Sbjct: 482 NR-WALGDNSKATIAEAEANKTRFTNWFNRTILPSGNTSCSEKLLLYVPRIPVPNYRGTY 540
Query: 360 DPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGL----------HDNLPVAISLLAKHGS 408
P AL AF+ I+ +SG + IP+G + LPV + ++A
Sbjct: 541 RPGPALP----SAFNTSRISVMSGTPDMVIPIGQVAYRSAVTNHTEYLPVTVDIMAAKSC 596
Query: 409 DGFLLNLVETL 419
DG L +L+E L
Sbjct: 597 DGMLFSLIEDL 607
>gi|219849410|ref|YP_002463843.1| amidase [Chloroflexus aggregans DSM 9485]
gi|219543669|gb|ACL25407.1| Amidase [Chloroflexus aggregans DSM 9485]
Length = 473
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 170/396 (42%), Gaps = 35/396 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+FDV G+ T G+ R AT A V + + GA IGKT M E
Sbjct: 89 PLHGVPVAVKDLFDVAGYPTAAGS--RIRADVMATIDATVVERLRAAGAIVIGKTRMSEF 146
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS N HYG NP R GGSSSGS VA +V +LGTDTGGS+R+PA++CG
Sbjct: 147 AYSPGSNNAHYGPTANPYDRQRDSGGSSSGSGVATATGMVFAALGTDTGGSIRIPAAHCG 206
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P+H VS AG ++ S D G + V L L+ L P
Sbjct: 207 IVGLKPTHGRVSLAGGFTLSWSLDHAG------PMTRSVADAALMLS---VLAGPDP--- 254
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIEN-------VILGDYVKDKVPSLQHFLS 259
D L P D GLV V L G + + +V +
Sbjct: 255 -RDPRTLRPAP-DFTGGGLVAGVRNLRVGLLTADGSGQPMAEAAELAAMQRVADV--LAG 310
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
+G +P L AL + L E H W+ T D G + R+ A S
Sbjct: 311 QGAIVIPLELPELEALRLLNQALLAMEAAALHLPWLRTRLDDYGEFMRHRILAAFIYSPV 370
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
+ Q + R ++ L + +L+ PTVPGP P L + S
Sbjct: 371 DVTRVQQARAIFRRRVATRLAEVDLLITPTVPGPVPALGVPTPT---------SFTGPWN 421
Query: 380 VSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLN 414
G+ +S+P L D LP A+ L+A+ ++ LL
Sbjct: 422 FLGWPALSLPAMLGADGLPRAVQLVARPWNEPLLLR 457
>gi|440738016|ref|ZP_20917565.1| amidase [Pseudomonas fluorescens BRIP34879]
gi|440381490|gb|ELQ18018.1| amidase [Pseudomonas fluorescens BRIP34879]
Length = 374
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 187/396 (47%), Gaps = 43/396 (10%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G T +KD D+ G T + + A + A V A+L G +GKT + E+A+
Sbjct: 14 GPTVMVKDTIDIAGLPT-RASSQALDDAAPAAAHAEVVQALLDKGCRLVGKTSLHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
G N GT NP P R+PGGSSSGSA AV A L DFSLGTDTGGSVR+PA CG+FG
Sbjct: 73 TTGINHWVGTAPNPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIPACCCGVFG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS-QVIFAE 208
F+P+ +S GV+P S D VG FA L L + + P+ Q + A
Sbjct: 133 FKPTFGRISRRGVMPTHSSLDCVGPFAAS----------LPMLVTAMQAIDPTFQPVAAP 182
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS 268
+L + SV+ G +++VI ++PS + +
Sbjct: 183 AAPRLG-----------IVSVQ---AGAAVQHVIDAAIADSRLPS-----------ETLT 217
Query: 269 IPSL-AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+PSL AA + M ++ R F + G + T K +G I+ R+ A T++ + + V
Sbjct: 218 LPSLKAAYEAGMVVINRETF-DACGHLLDTGK--VGADIAARLAAAGNTTSAALAQAEQV 274
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
+ + A + A L +LV+PT+P P L V AF + +SG +S
Sbjct: 275 RAQFSAEVDAALQQVDVLVLPTMPDFPLTLAEATDTQAVLGMTAF--VRPFNLSGHPALS 332
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
IPL + LPV + L+ G+D LL + L L
Sbjct: 333 IPLASAEGLPVGLQLVGGKGTDEQLLAIAGRLLERL 368
>gi|326405249|ref|YP_004285331.1| putative amidase [Acidiphilium multivorum AIU301]
gi|325052111|dbj|BAJ82449.1| putative amidase [Acidiphilium multivorum AIU301]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 173/395 (43%), Gaps = 37/395 (9%)
Query: 12 MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 71
M + + PS P +G+ A+KD+FD+ G T G+ A AA APA+ +
Sbjct: 65 MRRAGMAPS------PWAGIPIAVKDLFDMAGQETRAGSKVLAGCGPAAQD-APAIARLR 117
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFS 129
G IG+T M E AYS G N HYGTP + R+PGGSSSGSAVAV A +
Sbjct: 118 RMGFVPIGRTNMTEFAYSGIGTNPHYGTPPARWRREERRIPGGSSSGSAVAVAAGMAHAG 177
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+GTDTGGS R+PA + + GF+P+ + GV+P++ S D+VG A VG
Sbjct: 178 IGTDTGGSCRIPAVFNDLVGFKPTARRIPREGVVPLSSSLDSVGPLA------RSVG--C 229
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L D + P + P+ GL +V + +++ + +
Sbjct: 230 CALLDSIMAGTP------------EAPPAPAELAGLRLAVPRDVALDTLDDEVAAGFDA- 276
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
+L+ + G + + ++P A ++ +A L E H + P +
Sbjct: 277 ---ALRRLSAAGARIETIAMPEFAEVAKLNARGGLTAAESHAWHRPLLARGAEAYDPRVL 333
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALE 365
R+ SA + + +L A A L H L++PTV PP++ D +A
Sbjct: 334 VRLRRGAELSAADYIDLLAGRADLVARARARLAPHDALLMPTVAILPPRIADLDDDAAFT 393
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAI 400
R ++ + C +S+PL PV +
Sbjct: 394 AANLRVLRNPTLINMIDGCAISLPLNAPGAAPVGL 428
>gi|148261754|ref|YP_001235881.1| amidase [Acidiphilium cryptum JF-5]
gi|146403435|gb|ABQ31962.1| Amidase [Acidiphilium cryptum JF-5]
Length = 453
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 173/395 (43%), Gaps = 37/395 (9%)
Query: 12 MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 71
M + + PS P +G+ A+KD+FD+ G T G+ A AA APA+ +
Sbjct: 65 MRRAGMAPS------PWAGIPIAVKDLFDMAGQETRAGSKVLAGCGPAAQD-APAIARLR 117
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFS 129
G IG+T M E AYS G N HYGTP + R+PGGSSSGSAVAV A +
Sbjct: 118 RMGFVPIGRTNMTEFAYSGIGTNPHYGTPPARWRREERRIPGGSSSGSAVAVAAGMAHAG 177
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+GTDTGGS R+PA + + GF+P+ + GV+P++ S D+VG A VG
Sbjct: 178 IGTDTGGSCRIPAVFNDLVGFKPTARRIPREGVVPLSSSLDSVGPLA------RSVG--C 229
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L D + P + P+ GL +V + +++ + +
Sbjct: 230 CALLDSIMAGTP------------EAPPAPAELAGLRLAVPRDVALDTLDDEVAAGFDA- 276
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
+L+ + G + + ++P A ++ +A L E H + P +
Sbjct: 277 ---ALRRLSAAGARIETIAMPEFAEVAKLNARGGLTAAESHAWHRPLLARGAEAYDPRVL 333
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALE 365
R+ SA + + +L A A L H L++PTV PP++ D +A
Sbjct: 334 VRLRRGAELSAADYIDLLAGRADLVARARARLAPHDALLMPTVAILPPRIADLDDDAAFT 393
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAI 400
R ++ + C +S+PL PV +
Sbjct: 394 AANLRVLRNPTLINMIDGCAISLPLNAPGAAPVGL 428
>gi|326470556|gb|EGD94565.1| glutamyl-tRNA(Gln) amidotransferase [Trichophyton tonsurans CBS
112818]
Length = 627
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 176/431 (40%), Gaps = 62/431 (14%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
Q PL+G+ +KDIF+V G T GN W + + AA TA AV ++ GA +GK
Sbjct: 203 QKPLAGVRLGVKDIFNVKGLKTSNGNRAWYQLYPAANRTAIAVQNLIDAGAVVVGKMKTS 262
Query: 85 EMAYSINGENK-----HYGTPTNPCAPD-RVPGGSSSGSAVAVGAK-LVDFSLGTDTGGS 137
+ A NGE Y P NP + PG SS+G A A +D +LG+DTGGS
Sbjct: 263 QFA---NGETATADWVDYHAPFNPRGDGYQDPGSSSAGCAAGEAAYPWLDIALGSDTGGS 319
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
+R P+ G+FG RPSH VS G +P+A FDT G A DPK+ + L +
Sbjct: 320 IRSPSQLQGLFGNRPSHGLVSLEGAMPLAPQFDTAGLIARDPKLWAAAAKALYGANIKMT 379
Query: 198 LVRPSQVIFAE---------DCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYV 247
PS ++ D L L I DRV + L VE G +
Sbjct: 380 KSYPSHILAVGFPTKPKSDLDVLLLGFI--DRVARFLSARVEVFDVAAAWAATYPRGSPL 437
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
V + LS KEQ L R F +H P + P
Sbjct: 438 AAIVNNTYEILSA--KEQAR--------------LVRDVFYADHAAAHGGRLPHVNPAPL 481
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHG--------ILVIPTVPGPPPKLQM 359
R W S I ++ KT + + G +L +P +P P +
Sbjct: 482 NR-WALGDNSKATIAEAEANKTRFTNWFNRTILPSGNTSCSEKLLLYVPRIPVPNYRGTY 540
Query: 360 DPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGL----------HDNLPVAISLLAKHGS 408
P AL AF+ I+ +SG + IP+G + LPV + ++A
Sbjct: 541 RPGPALP----SAFNTSRISVMSGTPDMVIPIGQVAYRSAVTNHTEYLPVTVDIMAAKSC 596
Query: 409 DGFLLNLVETL 419
DG L +L+E L
Sbjct: 597 DGMLFSLIEDL 607
>gi|393770985|ref|ZP_10359461.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Novosphingobium sp. Rr 2-17]
gi|392723641|gb|EIZ81030.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Novosphingobium sp. Rr 2-17]
Length = 450
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 163/389 (41%), Gaps = 44/389 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ F +KD+FDV G T G+ + A AV + + GA + MDE
Sbjct: 66 PLAGVPFGVKDLFDVAGLPTTAGSTIYTDAAPALADAQ-AVARLCAAGAVLVATLNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N YGT NP P R+ GGSS GSA V A L+ FSLG+DT GSVRVPAS G
Sbjct: 125 AYGFATINAAYGTTRNPHDPSRLSGGSSGGSAAVVAAGLLPFSLGSDTNGSVRVPASLTG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+G +PSH+ + GV P A+SFD +G FA + + VL
Sbjct: 185 TYGLKPSHADLPLGGVFPFAESFDDIGHFANSAADMTLIWEVL----------------- 227
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVE-KLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
S R + ++ GG EN + L E
Sbjct: 228 -----------SGREAKCELQDFRIARLGGRFRENAEADQIAAIDAIAPAAPLIE----- 271
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+P +A SA L+ YE H + + P + +R+ + Q
Sbjct: 272 ---LPEIARARSAAFLITAYEGGALHREALAADPMRFDPQVRDRLLAGALLPDELYAEAQ 328
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP-----SALEVFRARAFSLLSIAGV 380
+ + E RA + AL+ D+ +L+ P P P L DP AL RA
Sbjct: 329 AFRAEYRARIEALVADYDVLLAPATPTVAP-LVSDPRILIDGALSPARADLGIHTQPISF 387
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
+G +S+PL LP+ + L+ + G +
Sbjct: 388 TGLPSLSVPLYRPGKLPIGLQLIGRPGGE 416
>gi|365883609|ref|ZP_09422745.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 375]
gi|365287897|emb|CCD95276.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 375]
Length = 475
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 153/334 (45%), Gaps = 22/334 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV G T G+ R AA A + + + GA +G M E
Sbjct: 74 PLAGVPFAVKNLFDVQGLPTRAGS-RINRDRPAAMRDAALIERMEAAGAVLVGALNMGEY 132
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP P R+ GGSS GS AVG LV +LG+DT GS+RVP+S+CG
Sbjct: 133 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCG 192
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P S D +G FA + L LA DV Q
Sbjct: 193 IFGLKPTYGRLSRARSFPFVMSLDHLGPFARSVED--------LALAYDV-----MQGPD 239
Query: 207 AEDCLQLSSIP---SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+D + P S ++QGL L GGH +N+ + ++ +
Sbjct: 240 PDDAACTARAPQPVSGLLSQGLEGLRIALAGGHFQKNLF-----PEAAEAVSRVAAALKV 294
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ +P A +A ++ E + H D + T D P + +R+ A +D
Sbjct: 295 TEVIEVPEAARARAAAYVISTTEGASLHLDRLRTRPGDFDPAVRDRLIAGAMIPAPMVDR 354
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
Q + RA + L +L+ P P PK+
Sbjct: 355 AQKFRRWYRAQVLELFKSVDVLIAPATPCIAPKI 388
>gi|254428707|ref|ZP_05042414.1| allophanate hydrolase [Alcanivorax sp. DG881]
gi|196194876|gb|EDX89835.1| allophanate hydrolase [Alcanivorax sp. DG881]
Length = 599
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 180/404 (44%), Gaps = 47/404 (11%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ FA+KD DV G T PD+A T A A AV + GA +GKT +D+
Sbjct: 60 LPLYGIPFAVKDNIDVAGMPTTAACPDFAYTPEA---DATAVRLLRKAGAIVVGKTNLDQ 116
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG NP PD + GGSSSGSA AV LV FSLGTDT GS RVPA++
Sbjct: 117 FATGLVGTRSPYGEVPNPFNPDYLSGGSSSGSATAVSLGLVPFSLGTDTAGSGRVPAAFT 176
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G +P+ A+ST GV+P ++ D V FA +V RV+ Q +D RP+
Sbjct: 177 NTVGLKPTRGAISTHGVVPACRTLDCVSIFALSVDDAQQVYRVIGQFDNDDAYSRPAPAS 236
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
Q + +P+ R T G+ K + GD + L E EQ
Sbjct: 237 ------QTTGLPA-RPTLGIPKDLP-----------WFGDTQAKQ-------LWEQQLEQ 271
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVT---TV-------KPD-LGPGISERVWEAV 314
I L + + + LQ G WV TV PD L P I + + A
Sbjct: 272 VKQIADLVTVDTMV--LQDAAALLYQGPWVAERFTVTESLLQQNPDALLPVIRDILEPAA 329
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK--LQMDPSALEVFRARAF 372
+A Q L+ AL+ L++PT PG + +Q DP L ++
Sbjct: 330 TLTAADGFRAQYQLAALKRQSDALMETVDALLLPTTPGIYTRAAVQADPITLN---SQLG 386
Query: 373 SLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNL 415
+ + + C +++P G D LP ++L+A D L +
Sbjct: 387 TWTNFVNLLDLCALALPGGFREDGLPGGVTLIAPAWQDHALADF 430
>gi|161870226|ref|YP_001599396.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis 053442]
gi|189045255|sp|A9M003.1|GATA_NEIM0 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|161595779|gb|ABX73439.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis
053442]
Length = 481
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 188/422 (44%), Gaps = 62/422 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S+ T+T V +L G ++G+T MDE A
Sbjct: 68 LTGIPVAYKDIFCQTGWRSACASKMLDNFISSYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF- 206
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL----SEGN 262
+D L D T+ L + ++ L G E G+ D + +LQ+ + ++G
Sbjct: 232 PKDSTSLEREKED-YTRDLNQPLKGLKIGLPKEYFGEGNSA-DVLTALQNTIDLLKAQGA 289
Query: 263 K-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPDLG 303
+ + + SIP+ L+SA L RY +F + + T G
Sbjct: 290 ELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFG 349
Query: 304 PGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
+ R+ ++A AQK+ + + + +++ PT P
Sbjct: 350 SEVKRRIMIGTYVLSHGYYDAYYLKAQKL------RRLVADDFQTVFARCDLILAPTAPT 403
Query: 353 PPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGF 411
PK+ D S +E + + +++ ++G +++P G LPV + L+ + ++
Sbjct: 404 AAPKIGADSSPVETYLSDIYTI--AVNLAGLPALTLPAGFSGGGLPVGVQLIGNYFAEAR 461
Query: 412 LL 413
+L
Sbjct: 462 IL 463
>gi|316935070|ref|YP_004110052.1| amidase [Rhodopseudomonas palustris DX-1]
gi|315602784|gb|ADU45319.1| Amidase [Rhodopseudomonas palustris DX-1]
Length = 449
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 180/412 (43%), Gaps = 33/412 (8%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
++ A P +G+ +IKD+FD+ G VT G+ + A S APAV + G IG
Sbjct: 63 AAKAAPSPFAGIPISIKDLFDIKGQVTRAGSRAL-DDNPPADSDAPAVARLRRAGFVVIG 121
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
++ M E AYS G N HYGTP D VPGGSSSG+AV+V + LGTDTGGS
Sbjct: 122 RSNMTEFAYSGIGINPHYGTPKAAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGS 181
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN 197
R+PA++ GI G++PS V G +P++ S D++G A + +L
Sbjct: 182 CRIPAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARSVACCATLDAILADQPVGPL 241
Query: 198 LVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
+ RP + + ++P+ GL +V F D+ +L+
Sbjct: 242 IARPPKGM-------RIAVPTTVALDGLDAAVTAAF---------------DR--ALKTL 277
Query: 258 LSEGNKEQEYSIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA-V 314
S G ++ +P A ++ A E H + P + ER+
Sbjct: 278 TSHGAIIEKIEVPEFAEVAPLGAKGGFAAAESYAWHRFLIVAQGDVYDPRVRERILRGET 337
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
+++A +D+ + K+ L A SA L + + +PT P + +A +L
Sbjct: 338 QSAADYVDLVNARKS-LIARASARLAPYDAVAMPTTAIAAPTIAELADDKAFTKANLLTL 396
Query: 375 LSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ ++ C +S+P P+ + L +G+D + + L ++
Sbjct: 397 RNCTLINMIDGCAISLPCHQDGVPPIGLMLAGVNGADREIFEVAAGLEAVIR 448
>gi|424878940|ref|ZP_18302575.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392519611|gb|EIW44342.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 447
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A+KD+ D+ G VT G+ + R A A V ++ G SIGKT +
Sbjct: 60 PLSAFDGVPIAVKDLLDIAGTVTTAGS-EIRRNLPPAREDAEVVSSIHGVGLISIGKTNL 118
Query: 84 DEMAYSINGENKHYGTPTNPCAPD-RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
E A+S G N H+GTP AP+ RVPGGSSSGSA+AV +V ++G+DT GS+RVPA
Sbjct: 119 SEFAFSGLGINPHFGTPIPGYAPEQRVPGGSSSGSAIAVERGVVLAAIGSDTAGSIRVPA 178
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
++ G+ GFRPS GV P+A SFDT+G A
Sbjct: 179 AFNGLHGFRPSTGRYPMRGVHPLASSFDTLGPIA 212
>gi|229584745|ref|YP_002843247.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus M.16.27]
gi|228019795|gb|ACP55202.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus M.16.27]
Length = 474
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 196/434 (45%), Gaps = 85/434 (19%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ AIKD G T + D+ + A + + GA +GKT MD
Sbjct: 60 LAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATV-----IEKLKKEGAVIVGKTNMD 114
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A V+ +LG+DTGGS+R PA+Y
Sbjct: 115 EFAMGSTTETSYFGPTRNPWNLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAY 174
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD------DVNL 198
FG +PS+ VS G++ A S + +G A + + L + ++ D D++L
Sbjct: 175 NATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTLDLSL 234
Query: 199 --------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV-EKLFG-GHIIENVILGDYVK 248
V+ ++ D L++S P G++K V +KL G +IE+ LG+
Sbjct: 235 NFEFKEQNVKSVRIGILSDILEMSEKP----VSGVIKDVIDKLSSEGALIEDTKLGN--- 287
Query: 249 DKVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKP 300
EY++P+ + A+S A L RY+ K G+W
Sbjct: 288 ----------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEGNWREVYAK 331
Query: 301 DLGPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
+ G + R+ +E A K V+ ++ +L L + IL
Sbjct: 332 NRGEAFGIEVKRRILLGSFILSAGYYEEFYLKALK------VRNLIKKSLDELFTKYDIL 385
Query: 346 VIPTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAIS 401
V PT+P PPK+ DP R A L + IA ++ +S+P G +++LP+ +
Sbjct: 386 VSPTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSLPAGFYNDLPIGLQ 440
Query: 402 LLAKHGSDGFLLNL 415
L+ K+ SD +L+N+
Sbjct: 441 LMGKYLSDIYLINI 454
>gi|227830229|ref|YP_002832009.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus L.S.2.15]
gi|229579044|ref|YP_002837442.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus Y.G.57.14]
gi|385773211|ref|YP_005645777.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
islandicus HVE10/4]
gi|385775845|ref|YP_005648413.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
islandicus REY15A]
gi|227456677|gb|ACP35364.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus L.S.2.15]
gi|228009758|gb|ACP45520.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus Y.G.57.14]
gi|323474593|gb|ADX85199.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus REY15A]
gi|323477325|gb|ADX82563.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus HVE10/4]
Length = 474
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 196/434 (45%), Gaps = 85/434 (19%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ AIKD G T + D+ + A + + GA +GKT MD
Sbjct: 60 LAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATV-----IEKLKKEGAVIVGKTNMD 114
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A V+ +LG+DTGGS+R PA+Y
Sbjct: 115 EFAMGSTTETSYFGPTRNPWNLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAY 174
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD------DVNL 198
FG +PS+ VS G++ A S + +G A + + L + ++ D D++L
Sbjct: 175 NATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTIDLSL 234
Query: 199 --------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV-EKLFG-GHIIENVILGDYVK 248
V+ ++ D L++S P G++K V +KL G +IE+ LG+
Sbjct: 235 NFEFKEQNVKSVRIGILSDILEMSEKP----VSGVIKDVIDKLSSEGALIEDTKLGN--- 287
Query: 249 DKVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKP 300
EY++P+ + A+S A L RY+ K G+W
Sbjct: 288 ----------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEGNWREVYAK 331
Query: 301 DLGPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
+ G + R+ +E A K V+ ++ +L L + IL
Sbjct: 332 NRGEAFGIEVKRRILLGSFILSAGYYEEFYLKALK------VRNLIKKSLDELFKKYDIL 385
Query: 346 VIPTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAIS 401
V PT+P PPK+ DP R A L + IA ++ +S+P G +++LP+ +
Sbjct: 386 VSPTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSLPAGFYNDLPIGLQ 440
Query: 402 LLAKHGSDGFLLNL 415
L+ K+ SD +L+N+
Sbjct: 441 LMGKYLSDIYLINI 454
>gi|268682309|ref|ZP_06149171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID332]
gi|268622593|gb|EEZ54993.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID332]
Length = 481
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 184/444 (41%), Gaps = 92/444 (20%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGVPVAYKDIFCQTGWCSACASKMLDNFISPYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK---- 263
S +R + + ++K G VK +P + + SEGN
Sbjct: 232 PK----DSTSFEREKEDYTRDLDKPLKG-----------VKIGLP--KEYFSEGNSTDVQ 274
Query: 264 -----------------------EQEYSIPSLAALSSAM--RLLQRY----------EFK 288
+ + SIP+ L+SA L RY +F
Sbjct: 275 TALQNTIDLLKAQGAEPVEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFG 334
Query: 289 NNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSA 337
+ + T G + R+ ++A AQK+ + V + + A +
Sbjct: 335 DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVADDFQTAFAR 392
Query: 338 LLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNL 396
+++ PT P PK+ D S +E + + +++ ++G +++P G L
Sbjct: 393 C----DLILAPTAPSAAPKIGADTSPVETYLSDIYTI--AVNLAGLPALTLPAGFSGGGL 446
Query: 397 PVAISLLAKHGSDGFLLNLVETLH 420
PV + L+ + ++ +L +
Sbjct: 447 PVGVQLVGNYFAEAKILGAAHQIQ 470
>gi|163846950|ref|YP_001634994.1| amidase [Chloroflexus aurantiacus J-10-fl]
gi|222524774|ref|YP_002569245.1| amidase [Chloroflexus sp. Y-400-fl]
gi|163668239|gb|ABY34605.1| Amidase [Chloroflexus aurantiacus J-10-fl]
gi|222448653|gb|ACM52919.1| Amidase [Chloroflexus sp. Y-400-fl]
Length = 528
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 182/402 (45%), Gaps = 41/402 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+FDV G+ T G+ R A+S + V + + GA IGKT M E
Sbjct: 144 PLHGVPIAVKDLFDVAGYPTAAGS--RIRAGVMASSDSTVVARLRAAGAIIIGKTRMSEF 201
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AYS N HYG NP P+R GGSSSGSAVAV + ++GTDTGGS+R+PA++CG
Sbjct: 202 AYSPGSNNAHYGPTANPYHPERDSGGSSSGSAVAVSTVMAYAAIGTDTGGSIRIPAAHCG 261
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA----DDVNLVRPS 202
I G +P+H VS AG P++ S D G A + + +L +A D +RP
Sbjct: 262 IVGLKPTHGRVSLAGGFPLSWSLDHAGPLA---RSVADAAVILQAIAGPDPRDHRTLRPE 318
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK--VPSLQHFLSE 260
S GL+ ++++ G + + G + D + ++Q
Sbjct: 319 ---------------SPFAVSGLLDYIDQVRIGLLTADGS-GQAITDAAGLAAMQRVADA 362
Query: 261 GNKEQEYSIPSLAALSSAMRLLQ----RYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
+ IP A+RLL E H W+ + + G + +R+ A
Sbjct: 363 LAERGATVIPIEVPELEALRLLNPALLAIEAAALHLPWLRSRLDEYGEFMRQRILAAFIY 422
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
S Q + LR ++ L +L+ P PGP P L + P+ S
Sbjct: 423 SPVDAVRVQQARANLRRRVAERLAGIDVLITPVTPGPAPALGV-PTPT--------SFTG 473
Query: 377 IAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVE 417
G+ +S+P G +N LP A L+A+ + LL + +
Sbjct: 474 PWNFLGWPALSLPTGREENGLPRAAQLIARPWCESLLLRVAQ 515
>gi|284997652|ref|YP_003419419.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
islandicus L.D.8.5]
gi|284445547|gb|ADB87049.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus L.D.8.5]
Length = 474
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 196/434 (45%), Gaps = 85/434 (19%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ AIKD G T + D+ + A + + GA +GKT MD
Sbjct: 60 LAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATV-----IEKLKKEGAVIVGKTNMD 114
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A V+ +LG+DTGGS+R PA+Y
Sbjct: 115 EFAMGSTTETSYFGPTRNPWNLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAY 174
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD------DVNL 198
FG +PS+ VS G++ A S + +G A + + L + ++ D D++L
Sbjct: 175 NATFGLKPSYGKVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTIDLSL 234
Query: 199 --------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV-EKLFG-GHIIENVILGDYVK 248
V+ ++ D L++S P G++K V +KL G +IE+ LG+
Sbjct: 235 NFEFKEQNVKSVRIGILSDILEMSEKP----VSGVIKDVIDKLSSEGALIEDTKLGN--- 287
Query: 249 DKVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKP 300
EY++P+ + A+S A L RY+ K G+W
Sbjct: 288 ----------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEGNWREVYAK 331
Query: 301 DLGPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
+ G + R+ +E A K V+ ++ +L L + IL
Sbjct: 332 NRGEAFGIEVKRRILLGSFILSAGYYEEFYLKALK------VRNLIKKSLDELFKKYDIL 385
Query: 346 VIPTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAIS 401
V PT+P PPK+ DP R A L + IA ++ +S+P G +++LP+ +
Sbjct: 386 VSPTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSLPAGFYNDLPIGLQ 440
Query: 402 LLAKHGSDGFLLNL 415
L+ K+ SD +L+N+
Sbjct: 441 LMGKYLSDIYLINI 454
>gi|350571846|ref|ZP_08940162.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
wadsworthii 9715]
gi|349791031|gb|EGZ44924.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
wadsworthii 9715]
Length = 484
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 187/432 (43%), Gaps = 67/432 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L+ G ++G+T MDE A
Sbjct: 68 LTGVPIAYKDIFCQKGWKSACSSKMLDNFISPYTATV--VQNLLNEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
E YG NP + VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNETSFYGATQNPWNLENVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGLKPTYGVVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMASFD 231
Query: 208 E-DCLQLSSIPSDRVT------QGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
E D L D +GL + K + G + D K ++ ++
Sbjct: 232 ERDSTSLERAKEDYTRDLNQPLKGLKVGLPKEYFGEGMS----ADVQKTVQTAIDLLKAQ 287
Query: 261 GNK-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPD 301
G + + E SIP+ L+SA L RY +F N + T
Sbjct: 288 GAEMVEVSLPQTELSIPAYYVLASAEASTNLSRYDGVRYGHRAEQFGNLEELYSNTRAEG 347
Query: 302 LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
G + R+ ++A AQK+ + V + + AL I++ PT
Sbjct: 348 FGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVANDFQTALQQC----DIILAPTA 401
Query: 351 PGPPPKLQMDPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGS 408
P PKL D + ++++ + +++ ++G +++P G + LP+ + L+ + +
Sbjct: 402 PTAAPKLGSDINDPVQMYLSDIYTI--AVNLAGLPAMTLPAGFSSEGLPIGVQLIGNYFA 459
Query: 409 DGFLLNLVETLH 420
+ LL + +
Sbjct: 460 EAKLLGVAHQMQ 471
>gi|332797085|ref|YP_004458585.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Acidianus hospitalis
W1]
gi|332694820|gb|AEE94287.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Acidianus
hospitalis W1]
Length = 472
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 194/441 (43%), Gaps = 83/441 (18%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ A+KD+ G T + D+ + A + + + GA +GKT MD
Sbjct: 60 LAGVLIAVKDVISTKGIRTTCASKMLSDYIPPYDATV-----IEKLKNEGAVILGKTNMD 114
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A VD +LG+DTGGS+R PA++
Sbjct: 115 EFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGYVDLALGSDTGGSIRAPAAF 174
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD-DVNLVRPS- 202
FG +PS+ VS G+I A S + +G A + + L + ++ D D ++ S
Sbjct: 175 TATFGLKPSYGTVSRYGLIAYANSLEQIGPMAKNAEDLGLLYSIIAGEDDKDATTIKYSV 234
Query: 203 ------------QVIFAEDCLQLSSIPSDRVTQGLVKS-VEKLFG-GHIIENVILGDYVK 248
++ D L++ SD+ ++++ ++KL G IIE LG
Sbjct: 235 DNPPGEIPIKGIKIGVLSDILEM----SDKSVVNVIRTAIDKLSSEGAIIEETKLG---- 286
Query: 249 DKVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKP 300
EY++P+ + A+S A L RY+ K+ G+W+ T
Sbjct: 287 ---------------YAEYALPAYYIIAMSEASSNLARYDGVRYGYSKHFEGNWIETFSK 331
Query: 301 DLGPGISERV---------------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
+ G G V +E A K V+ ++ +L L + +L
Sbjct: 332 NRGEGFGMEVKRRILLGSFILSAGYYEEYYIKALK------VRRLIKNSLDQLFSKYDVL 385
Query: 346 VIPTVPGPPPKLQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISL 402
+ PT+P PPK+ DP + IA ++ +SIP G ++NLPV + +
Sbjct: 386 LSPTMPVLPPKIGEVINDPIKMYAMDVNTV----IANLAAIPAISIPAGFYNNLPVGLQM 441
Query: 403 LAKHGSDGFLLNLVETLHNTL 423
+ ++ SD L+ + + L
Sbjct: 442 MGRYLSDTMLIGISINIEKIL 462
>gi|229582205|ref|YP_002840604.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus Y.N.15.51]
gi|228012921|gb|ACP48682.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus Y.N.15.51]
Length = 474
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 179/385 (46%), Gaps = 77/385 (20%)
Query: 74 GATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTD 133
GA +GKT MDE A E ++G NP +R PGGSS GS A+ A V+ +LG+D
Sbjct: 104 GAVIVGKTNMDEFAMGSTTETSYFGPTRNPWNLERTPGGSSGGSGAALAAGYVELALGSD 163
Query: 134 TGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA 193
TGGS+R PA+Y FG +PS+ VS G++ A S + +G A + + L + ++
Sbjct: 164 TGGSIRAPAAYNATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPD 223
Query: 194 D------DVNL--------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV-EKLFG-GHI 237
D D++L V+ ++ D L++S P G++K V +KL G +
Sbjct: 224 DKDATTIDLSLNFEFKEQNVKSVRIGILSDILEMSEKP----VSGVIKDVIDKLSSEGAL 279
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKN 289
IE+ LG+ EY++P+ + A+S A L RY+ K
Sbjct: 280 IEDTKLGN-------------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKY 320
Query: 290 NHGDWVTTVKPDLGPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAA 334
G+W + G + R+ +E A K VK ++ +
Sbjct: 321 MEGNWREVYAKNRGEAFGIEVKRRILLGSFILSAGYYEEFYLKALK------VKNLIKKS 374
Query: 335 LSALLGDHGILVIPTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPL 390
L L + ILV PT+P PPK+ DP R A L + IA ++ +S+P
Sbjct: 375 LDELFKKYDILVSPTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSLPA 429
Query: 391 GLHDNLPVAISLLAKHGSDGFLLNL 415
G +++LP+ + L+ K+ SD +L+N+
Sbjct: 430 GFYNDLPIGLQLMGKYLSDIYLINI 454
>gi|227827542|ref|YP_002829322.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus M.14.25]
gi|238619699|ref|YP_002914525.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus M.16.4]
gi|227459338|gb|ACP38024.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus M.14.25]
gi|238380769|gb|ACR41857.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus M.16.4]
Length = 474
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 196/434 (45%), Gaps = 85/434 (19%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ AIKD G T + D+ + A + + GA +GKT MD
Sbjct: 60 LAGILIAIKDNISTKGIRTTCASKMLEDYIPPYDATV-----IEKLKKEGAVIVGKTNMD 114
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A V+ +LG+DTGGS+R PA+Y
Sbjct: 115 EFAMGSTTETSYFGPTRNPWNLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAY 174
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD------DVNL 198
FG +PS+ VS G++ A S + +G A + + L + ++ D D++L
Sbjct: 175 NATFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTLDLSL 234
Query: 199 --------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV-EKLFG-GHIIENVILGDYVK 248
V+ ++ D L++S P G++K V +KL G +IE+ LG+
Sbjct: 235 NFEFKEQNVKSVRIGILSDILEMSEKP----VSGVIKDVIDKLSSEGALIEDTKLGN--- 287
Query: 249 DKVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKP 300
EY++P+ + A+S A L RY+ K G+W
Sbjct: 288 ----------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEGNWREVYAK 331
Query: 301 DLGPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGIL 345
+ G + R+ +E A K V+ ++ +L L + IL
Sbjct: 332 NRGEAFGIEVKRRILLGSFILSAGYYEEFYLKALK------VRNLIKKSLDELFTKYDIL 385
Query: 346 VIPTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAIS 401
V PT+P PPK+ DP R A L + IA ++ +S+P G +++LP+ +
Sbjct: 386 VSPTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSLPAGFYNDLPIGLQ 440
Query: 402 LLAKHGSDGFLLNL 415
L+ K+ SD +L+N+
Sbjct: 441 LMGKYLSDIYLINI 454
>gi|251788510|ref|YP_003003231.1| amidase [Dickeya zeae Ech1591]
gi|247537131|gb|ACT05752.1| amidohydrolase, AtzE family [Dickeya zeae Ech1591]
Length = 470
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 170/389 (43%), Gaps = 37/389 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ +A+K++FDV G T G +++ AA A AV + + GA G MD A
Sbjct: 71 LAGVPYAVKNLFDVAGETTLAGARLFSQ-RPAAAQDAFAVRQLQAQGALLSGLLNMDAYA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP R+ GGSS GSA AV A LV+FSLG+DT GS+RVPAS CGI
Sbjct: 130 YGFTTENSHYGATRNPHDLTRIAGGSSGGSAAAVAAGLVNFSLGSDTNGSIRVPASLCGI 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG +P+ +S G P S D +G A + DD+ LV
Sbjct: 190 FGLKPTFGRLSRQGTQPFVGSLDHIGPLA--------------RSVDDLALV-------- 227
Query: 208 EDCLQLSSIPSDRVT--QGLVKSVEKLFGGHIIENVILGDYV-----KDKVPSLQHFLSE 260
D LQ P+DR Q L +V L + + +LG Y + ++Q
Sbjct: 228 YDVLQ-GRDPADRFQADQPLRSTVPSLADAAPLRSRVLGGYFAQWCDEQATAAVQQVADA 286
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
N + + + + A +A +L E N + + P ER+ A
Sbjct: 287 LNADHDVILDNAALARTAAFILSASEGGNQYLPALHDTPDQFEPLSRERLLAGAMIPAAW 346
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPP-----PKLQMDPSALEVFRARAFSLL 375
Q + R + AL D +L+ P P P ++++ + L + RA L
Sbjct: 347 YVQAQRFRDHFRREVLALFNDTDLLIAPATPCPATPIGQETMRINHTDLPI-RASMGMLT 405
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLA 404
G V++PL LP+ + L+A
Sbjct: 406 QPISFVGLPVVTVPLATAGGLPIGVQLIA 434
>gi|421557454|ref|ZP_16003359.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 80179]
gi|402335092|gb|EJU70367.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 80179]
Length = 481
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 187/421 (44%), Gaps = 60/421 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGIPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLVRPSQ 203
G +P++ VS G++ A SFD G A + +LN + D +L R
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAG--FDPKDSTSLEREK- 242
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG-------GHIIENVILGDYVKDKVPSLQH 256
ED + + P V GL K + FG ++N I D +K + L
Sbjct: 243 ----EDYTRDLNQPLKGVKIGLPK---EYFGEGNSADVQTALQNTI--DLLKTQGAEL-- 291
Query: 257 FLSEGNKEQEYSIPSLAALSSAM--RLLQRY----------EFKNNHGDWVTTVKPDLGP 304
+ + + SIP+ L+SA L RY +F + + T G
Sbjct: 292 -VEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFGS 350
Query: 305 GISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP 353
+ R+ ++A AQK+ + V + + A + +++ PT P
Sbjct: 351 EVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVADDFQTAFARC----DLILAPTAPTA 404
Query: 354 PPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFL 412
PK+ D S +E + + +++ ++G +++P G LP+ + L+ + ++ +
Sbjct: 405 APKIGADASPVETYLSDIYTI--AVNLAGLPALTLPAGFSGGGLPIGVQLIGNYFAEAKI 462
Query: 413 L 413
L
Sbjct: 463 L 463
>gi|345019955|ref|ZP_08783568.1| glutamyl-tRNA(gln) amidotransferase subunit a [Ornithinibacillus
scapharcae TW25]
Length = 463
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 182/419 (43%), Gaps = 56/419 (13%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ IKD + G T G+ +A + A V +L G+ +GK M E+
Sbjct: 71 PLHGIPIGIKDNYATKGIRTTDGSKLFA--NFIPEQNATTVKKLLGAGSIMLGKQNMHEL 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A G N +YGT NP +PGGSSSG A ++ A L + G+DT GS+R+PA+ CG
Sbjct: 129 AAGSTGTNPYYGTTRNPWNIRYMPGGSSSGGAASLAAGLAVLTTGSDTFGSIRLPAAMCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW------------------DPKILN-RVGR 187
++G +P++ +ST GVIP A S DT G A DP L+ R+
Sbjct: 189 VYGLKPTYGLISTFGVIPTAWSLDTAGPMARSVSDLALMLQYMAGFDGKDPASLDVRIPN 248
Query: 188 VLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
+ L +N V+ IP+ + +GL V+KLF
Sbjct: 249 YMKNLHKGMNGVK-------------IGIPTYYL-RGLDPDVDKLF-------------- 280
Query: 248 KDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGIS 307
+ + +L+ G + +E IP L + A + E H +W+ D I
Sbjct: 281 QQAIHTLRRL---GAEIKEMEIPELEMATYAGYAIVTGEASTFHYEWLKEYSEDYSVDIR 337
Query: 308 ERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD--PSALE 365
T+A + Q + ++ AL D IL+ PTVP P + D LE
Sbjct: 338 SFFLSGALTAAPQYVRAQQARRKMVKALKQAFSDVDILLGPTVPMTTPAYREDWIEQNLE 397
Query: 366 VFRARAFSLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
V R ++ + ++G +S+P+GL LPV + + H S+ L + + NT+
Sbjct: 398 VVR-KSMPFTAPINLTGIPSLSVPMGLDQRGLPVGMQFMGNHLSEALLFQIGKAWENTV 455
>gi|424891426|ref|ZP_18315009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393185421|gb|EJC85457.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 456
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 92/148 (62%), Gaps = 3/148 (2%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FD++G T G+ A + A A V + G ++G+T M E A
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLA-GEAPARHDAAVVGLLRQAGMIAVGRTNMSEFA 130
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP D R+PGGSSSG+ VAV A LV ++GTDTGGSVR+PA++
Sbjct: 131 FSGLGINPHYGTPVNPRGADLPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAFN 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
GI G++ + + GV P+A+S D++G
Sbjct: 191 GIVGYKATRGRHAMEGVYPLAKSLDSLG 218
>gi|94310811|ref|YP_584021.1| amidase [Cupriavidus metallidurans CH34]
gi|93354663|gb|ABF08752.1| putative amidase [Cupriavidus metallidurans CH34]
Length = 450
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 166/383 (43%), Gaps = 33/383 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD++D+ G VT + A V + + GA IG+T M E
Sbjct: 66 PLAGLPVSVKDLYDIAGEVTRAASAARQDAAPATADAT-VVARLRAAGAALIGRTNMTEF 124
Query: 87 AYSINGENKHYGTPTNPC--APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N H+GTP NPC + R+PGGSSSG+AV+V LG+DTGGS+R+PA+
Sbjct: 125 AFSGVGINPHFGTPVNPCDSSVARIPGGSSSGAAVSVAIGTAVAGLGSDTGGSIRIPAAL 184
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CGI GF+P+ V G P++ + DT A V V+ DV + +
Sbjct: 185 CGIVGFKPTSRRVPLTGAFPLSYTLDTACAMARTLTDCIAVDSVIA----DVPFIPQMK- 239
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLSEGNK 263
A + L +IP V L + V K F I G ++ +P L L+ N
Sbjct: 240 --ASTAIHL-AIPRQLVLDDLDEPVSKAFDRAIGRLSAAGVRIEHVDMPELTE-LASLNA 295
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+S P A A+ + R + P + R+ SA
Sbjct: 296 AGGFSAPESYAHHRALLAIHRDLYD---------------PRVVTRIERGAAMSAADYIA 340
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVP--GPPPKLQMDPSALEVFRARAFSLLSIAGVS 381
+ + A + A + +V PTVP PP ++ L FR L + + +
Sbjct: 341 LHRARLDWIARMEARMAPFDAVVCPTVPMVAPPIAPLVEDDTL-FFRTNGLLLRNTSAFN 399
Query: 382 GF--CQVSIPLGLHDNLPVAISL 402
C VS+P D LPV + L
Sbjct: 400 FLDGCSVSLPCHAPDELPVGLML 422
>gi|146343580|ref|YP_001208628.1| amidase [Bradyrhizobium sp. ORS 278]
gi|146196386|emb|CAL80413.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 278]
Length = 475
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 155/334 (46%), Gaps = 22/334 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV T G+ R + A + + + + GA +G M E
Sbjct: 74 PLAGVPFAVKNLFDVADLPTRAGS-KINRDRAPAPRDSTLIERMEAAGAVLVGALNMGEY 132
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP P R+ GGSS GS AVG LV +LG+DT GS+RVP+S+CG
Sbjct: 133 AYDFTGENIHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCG 192
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P S D +G FA + L LA DV Q
Sbjct: 193 IFGLKPTYGRLSRARSFPFVMSLDHLGPFARSVED--------LALAYDV-----MQGPD 239
Query: 207 AEDCLQLSSIP---SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
++D S P S +++QGL + GGH +N+ + ++ ++
Sbjct: 240 SDDAACTSRAPEPVSGQLSQGLDGLRIAIAGGHFQKNLF-----PEAAEAVSRVVAALKV 294
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
Q +P A +A ++ E + H D + T D P + +R+ A +D
Sbjct: 295 TQVIEVPEAARARAAAYVISTTEGASLHLDRLRTRPDDFDPAVRDRLIAGAMIPAPMVDR 354
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
Q + RA + L +L+ P P PKL
Sbjct: 355 AQKFRRWYRAKVLELFRSVDVLIAPATPCVAPKL 388
>gi|407773411|ref|ZP_11120712.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Thalassospira profundimaris WP0211]
gi|407283875|gb|EKF09403.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Thalassospira profundimaris WP0211]
Length = 427
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 197/422 (46%), Gaps = 40/422 (9%)
Query: 4 RDSDYGAFMEKFVLQPSSSAHQL-------PLSGLTFAIKDIFDVDGHVTGFGNPDWART 56
+D + F + +L+ ++ A Q L+G+ ++KD++D G T + + +
Sbjct: 22 KDKIFTEFDSERILKAAAEAEQYCAQNPGAALAGMLVSVKDLYDEAGIATTAAS-ELLKG 80
Query: 57 HSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSG 116
+ A + + V + + GA G+T + E AYS G N HYGTP N D +PGGS+SG
Sbjct: 81 CAPAEADSECVRRIKAAGAIPFGRTTLSEFAYSGVGLNPHYGTPGNIFDADGIPGGSTSG 140
Query: 117 SAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+ V +VD +LGTDTGGS+R+P++ G++G +PS +V AG+ P+A+SFDT G A
Sbjct: 141 GGLTVAHGIVDLALGTDTGGSIRIPSAINGLYGIKPSRLSVPGAGIHPLAKSFDTPGPLA 200
Query: 177 WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH 236
D + R VL D+ + P A L++ +P + GL V+ F
Sbjct: 201 GDLETAIRAFEVLT----DITVTPPED---AAKSLRI-GVPMNAFVDGLDDRVKADFA-- 250
Query: 237 IIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVT 296
++ +KD G++ E +A + ++L +E +
Sbjct: 251 -----MICAKLKDA----------GHELIEIDFDFIAKNAILNKMLVSFEAHRIYAKDFA 295
Query: 297 TVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
++ P + R+ A S+ ++ + +T++ + + D +++ PT+P PK
Sbjct: 296 KLETVGDPRVLSRMKFADTLSSDEVIDAYAKRTDIVSMFGTTMADVDVMIAPTLPRMAPK 355
Query: 357 L---QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNL-PVAISLLAKHGSDGFL 412
+ + D L R L++ C +S+P+ + + P A+ + A HG D +
Sbjct: 356 IAEVEADFDNLNALMLRNTGYLNLVDA---CAMSMPVQIKGEVAPAALMIGAPHGHDQAI 412
Query: 413 LN 414
L
Sbjct: 413 LT 414
>gi|294085577|ref|YP_003552337.1| glutamyl/aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Candidatus Puniceispirillum marinum IMCC1322]
gi|292665152|gb|ADE40253.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Candidatus Puniceispirillum marinum IMCC1322]
Length = 460
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 182/416 (43%), Gaps = 54/416 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P +G++ +IKD+FDV G VT G+ A + A A V + G IG+T M E
Sbjct: 80 PFAGVSLSIKDLFDVAGDVTKAGSILLADS-PPAKKDATIVARLRQAGFILIGRTNMTEF 138
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD----FSLGTDTGGSVRVPA 142
A+S G N HYG P +P DR G + GS+ + D S+G+DTGGS R PA
Sbjct: 139 AFSGLGMNVHYGNPLSPY--DRKTGRVAGGSSSGSAVSVSDNMAAISIGSDTGGSTRAPA 196
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
SYCGI G +PS + + + GV P++ SFD G ++ + ++ V S
Sbjct: 197 SYCGIVGLKPSTARMPSDGVFPLSPSFDAAGPMGNSVACVSIIDSIM------AGGVGVS 250
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+ F D L+L +IP + + L V F I D ++D G
Sbjct: 251 ETPFNPDGLRL-AIPDGYLMENLDAEVATAFDAAI-------DRLRDA----------GV 292
Query: 263 KEQEYSIPSLAAL--SSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVW-------- 311
Q+ + +L A+ S+ + + E H W+ + + D P I R+
Sbjct: 293 HVQKIRLDALEAMRPSNNTKSIVSAEAYAVHRQWLESDQSDKYDPFIGHRLRGGADILAA 352
Query: 312 EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARA 371
+ + ++ VC ++K + R LV+PT PG P + P+ + A
Sbjct: 353 DYIAMFEKRDTVCHNIKMQTRG--------FDALVLPTTPGIAPAINAMPTRDKQLEMNA 404
Query: 372 FSLLSIAGVSGFCQ---VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
SL + A +S + +SIP PV +SL+ D LL + E L ++
Sbjct: 405 RSLRNTA-ISNYLDRPTISIPCHKSGTAPVGLSLMGSRHHDRRLLAIAEGLEAIIR 459
>gi|46133813|ref|XP_389222.1| hypothetical protein FG09046.1 [Gibberella zeae PH-1]
Length = 669
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL IKD+FD+ G T FG+ W T TA AV ++ GA +GK + E
Sbjct: 182 PLAGLRIGIKDLFDMKGVKTSFGSKAWYDMSKIKTETAIAVQKLIDAGAIIVGKNKLSEF 241
Query: 87 AYS--INGENKHYGTPTNPCAPD-RVPGGSSSGSAVAVGA-KLVDFSLGTDTGGSVRVPA 142
A++ E+ Y P NP + P SS GSA AV + +D SLG+DTGGS+R PA
Sbjct: 242 AFAGMFVTEHIDYLLPVNPRGDGYQSPSDSSGGSAAAVASYDWLDASLGSDTGGSIRGPA 301
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNL-- 198
S G+ G RP+ AV+ G +P++ S DT G DP++ R+ +VL +L D L
Sbjct: 302 STNGVHGGRPTQDAVNLTGALPLSVSMDTAGILVRDPRMWARINKVLYDDELEDYDELPS 361
Query: 199 ---VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLF 233
V PS +D L+ S + QG++ + K+
Sbjct: 362 EIFVDPSTKSEIQD-LERKSTQAAEAVQGVLDGLSKIL 398
>gi|378827806|ref|YP_005190538.1| putative amidase [Sinorhizobium fredii HH103]
gi|365180858|emb|CCE97713.1| putative amidase [Sinorhizobium fredii HH103]
Length = 435
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 34/405 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL +IKD+FDV G T G+ RT A++ A V + + GA IGKT M E
Sbjct: 56 PLDGLIVSIKDLFDVAGEPTLAGS-ILRRTAPPASADATVVRRLRAAGAVIIGKTHMTEF 114
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G N HY P N P VPGGSSSG+ V+V + ++G+DTGGSVR+PA+ G
Sbjct: 115 AFTAVGLNPHYPVPGNAVDPMLVPGGSSSGAGVSVAEGTSEIAIGSDTGGSVRIPAALHG 174
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V G P++ S D++G A L +AD ++
Sbjct: 175 LVGFKPTARRVPLDGAFPLSPSLDSIGPLA-------------LSVAD---CAAADAIMA 218
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
E L+ +P +T G+ K I+ + D K SLQ G E
Sbjct: 219 GETPEPLTPLPVGGLTLGIPKG--------ILLKELAPDIAKAFEASLQRLSRAGASLAE 270
Query: 267 YSIPSLAAL---SSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ I L A ++A+ L E H DW+ + P + + + ++
Sbjct: 271 FEIDDLLARFAEATAIGSLASLEASRIHADWLVDDTAPVDPRVKSPLRRRLAVPDAALET 330
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL----SIAG 379
+ L A+ L ++++PT P P ++ + +R R LL +A
Sbjct: 331 LLQTRRALARAMDERLARFDLVLLPTTPIPAVRIASVEQDKQQYR-RVEDLLLRNTEVAN 389
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+++P+ LP + L+ ++G+D LL + ++ L+
Sbjct: 390 QFDLTAITLPMP-GTALPAGLMLMGRNGADRALLRVAASVECLLQ 433
>gi|297539390|ref|YP_003675159.1| allophanate hydrolase [Methylotenera versatilis 301]
gi|297258737|gb|ADI30582.1| allophanate hydrolase [Methylotenera versatilis 301]
Length = 457
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
S S LPL G+ FAIKD D+ G T P++A T +A V ++ GA IG
Sbjct: 57 SKSIADLPLYGVPFAIKDNIDLAGIPTTAACPEYAYI---PTVSATVVQKLIDAGAIPIG 113
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT +D+ A + G YG N PD + GGSS+GSAV+V + FSLGTDT GS R
Sbjct: 114 KTNLDQFATGLVGTRSPYGACQNSFNPDYISGGSSAGSAVSVALGMASFSLGTDTAGSGR 173
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
VPAS+ + G +PS +ST+GV+P ++ D V FA
Sbjct: 174 VPASFNNLVGHKPSCGLLSTSGVVPACRTLDCVSIFA 210
>gi|148254039|ref|YP_001238624.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp.
BTAi1]
gi|146406212|gb|ABQ34718.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Bradyrhizobium sp. BTAi1]
Length = 471
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAA 60
+A RD + L P+ LPL G+ F++KD D G T P ++ +A
Sbjct: 49 VADRDGLLARARQLEALTPAQR-EALPLWGIPFSVKDCIDAAGFATTSACPGFSYLPAA- 106
Query: 61 TSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVA 120
+P+V +L+ GA IGKT MD+ A + G YG NP +PGGSSSG+AV+
Sbjct: 107 --NSPSVERLLAAGAILIGKTNMDQFATGLVGTRSPYGVARNPFDAAYIPGGSSSGAAVS 164
Query: 121 VGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
V + LV +LGTDTGGS RVPA++ I G +P+ +S AG +P +S +TV FA
Sbjct: 165 VASGLVSVALGTDTGGSGRVPAAFNNIVGLKPTRGLISGAGTVPACRSIETVSIFA 220
>gi|300311162|ref|YP_003775254.1| amidase [Herbaspirillum seropedicae SmR1]
gi|300073947|gb|ADJ63346.1| amidase family protein [Herbaspirillum seropedicae SmR1]
Length = 450
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 190/402 (47%), Gaps = 42/402 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ ++KD+FDV G T G+ R A++ A V +L GA IGKT M E
Sbjct: 68 PLEGVPVSVKDLFDVAGETTLAGSVVL-RGKPVASAHAAVVQNLLKAGAILIGKTNMTEF 126
Query: 87 AYSINGENKHYGTPTNPCAPD----RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
AYS G N HYGTP N + R+PGGSSSG+A++V + ++G+DTGGSVR+P+
Sbjct: 127 AYSGLGINPHYGTPQNAWERNIEGGRIPGGSSSGAAISVTDGMAFAAVGSDTGGSVRIPS 186
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPS 202
+ G+ GF+P+ + VS GV+P++ D++G A + + VL L P
Sbjct: 187 ALNGLTGFKPTAARVSMQGVLPLSAYLDSIGPLAVSVQCCAIMDAVLAGEDYVAVLAHPL 246
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY-VKDKVPSLQHFLSEG 261
+ L+L + P++ V G+ +V + + + + G V+ +VP+
Sbjct: 247 R------GLRLLA-PTNVVLDGMDDTVGQAYRTALGKLAAAGAMIVEAEVPAFN------ 293
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-----RT 316
+LAA+++ + W + + G +RV + +
Sbjct: 294 ---------ALAAINAKGGFTAAEAYA-----WHRALIAENAAGYDQRVVSRILRGKDMS 339
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLS 376
+A +DV + + A + A L + LV+PTVP P++ ++ + + +L
Sbjct: 340 AADLLDVLHA-RPRWIAQVEAQLAGYDALVMPTVPIVAPRIAELQASDDAYYGANGKMLR 398
Query: 377 IAGVSGF---CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
+ F C +S+P + PV +SL A G D LL++
Sbjct: 399 NPTLINFLDGCALSLPCHAPGSAPVGLSLAACGGQDKRLLSI 440
>gi|265983701|ref|ZP_06096436.1| amidase [Brucella sp. 83/13]
gi|306838702|ref|ZP_07471537.1| amidase [Brucella sp. NF 2653]
gi|264662293|gb|EEZ32554.1| amidase [Brucella sp. 83/13]
gi|306406189|gb|EFM62433.1| amidase [Brucella sp. NF 2653]
Length = 445
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G +IKD+FDV G T G+ R A A V + + GA IGKT M E
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGSV-VRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEF 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+ G
Sbjct: 111 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVG 173
+ GF+P+ + G P+A S D+VG
Sbjct: 171 LVGFKPTARRIPLEGAFPLAPSLDSVG 197
>gi|187927611|ref|YP_001898098.1| amidase [Ralstonia pickettii 12J]
gi|187724501|gb|ACD25666.1| Amidase [Ralstonia pickettii 12J]
Length = 452
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 185/405 (45%), Gaps = 33/405 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ A AT+ A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALA-DQPRATTDAAAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+P+++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFCNL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V G +P++ S D+ G A V VL + +
Sbjct: 192 TGFKPTARRVPMTGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGESGN------------ 239
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D +++P GL + + F G ++N + + + +++ G +
Sbjct: 240 -DAFDTTAVP----LAGLRFGITQDFVGADLDNTVAVAFER----AVERLERAGAHIVRF 290
Query: 268 SIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK-IDVC 324
P L L ++ E H + + P ++ R+ + SA IDV
Sbjct: 291 EFPELLQLPEINSGGGFSAAESWAWHRSLLARAEVQYDPRVATRIRRGEQMSAAAYIDVI 350
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLL--SIAG 379
+ + AA LG+ ++PTV PP+ L++D + + FR A +L S+
Sbjct: 351 NARARMI-AAARKRLGNFDAWLMPTVAIVPPEVAPLEVDDA--QFFRINALTLRNPSVIN 407
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
C +++P+ + LPV +SL D +L + + L+
Sbjct: 408 FLDGCALTLPVHVAGELPVGLSLCGLANDDARILRVGRAVEAALR 452
>gi|408393181|gb|EKJ72447.1| hypothetical protein FPSE_07328 [Fusarium pseudograminearum CS3096]
Length = 649
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL IKD+FD+ G T FGN W T TA AV ++ GA +GK + E
Sbjct: 171 PLAGLRIGIKDLFDMKGVKTSFGNKAWYDMSKVKTETAIAVQKLIDAGAVIVGKNKLSEF 230
Query: 87 AYS--INGENKHYGTPTNPCAPD-RVPGGSSSGSAVAVGA-KLVDFSLGTDTGGSVRVPA 142
A++ E+ Y P NP + P SS GSA AV + +D SLG+DTGGS+R PA
Sbjct: 231 AFAGMFVTEHIDYLLPVNPRGDGYQSPSDSSGGSAAAVASYDWLDASLGSDTGGSIRGPA 290
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
S G+ G RP+ AV+ G +P++ S DT G DP++ R+ +VL
Sbjct: 291 STNGVHGGRPTQDAVNLTGALPLSVSMDTAGIIVRDPRMWARINKVL 337
>gi|421563556|ref|ZP_16009375.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2795]
gi|421907086|ref|ZP_16336974.1| aspartyl-tRNA amidotransferase subunit A [Neisseria meningitidis
alpha704]
gi|393292050|emb|CCI72947.1| aspartyl-tRNA amidotransferase subunit A [Neisseria meningitidis
alpha704]
gi|402341252|gb|EJU76439.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2795]
Length = 481
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 189/442 (42%), Gaps = 76/442 (17%)
Query: 13 EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS 72
+K + Q ++SA L+G+ A KDIF G + + S T+T V +L
Sbjct: 57 DKRIAQGNASA----LTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQNLLD 110
Query: 73 GGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGT 132
G ++G+T MDE A EN YG NP P+ VPGGSS GSA V A+L +LG+
Sbjct: 111 EGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGS 170
Query: 133 DTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA---------------W 177
DTGGS+R PAS+CGI G +P++ VS G++ A SFD G A +
Sbjct: 171 DTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAMAGF 230
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI 237
DPK + R D+N I +P + +G V+
Sbjct: 231 DPKDSTSLEREKEDYTRDLNQPLKGMKI---------GLPKEYFGEGNSADVQT-----A 276
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRL--LQRY---------- 285
++N I D +K + L + + + SIP+ L+SA L RY
Sbjct: 277 LQNTI--DLLKTQGAEL---VEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAA 331
Query: 286 EFKNNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKID--VCQSVKTELR 332
+F + + T G + R+ ++A AQK+ V +T
Sbjct: 332 QFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQT--- 388
Query: 333 AALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGL 392
+ +++ PT P P++ D S +E + + +++ ++G +++P G
Sbjct: 389 -----VFARCDLILAPTAPTAAPRIGADASPVETYLSDIYTI--AVNLAGLPALTLPAGF 441
Query: 393 H-DNLPVAISLLAKHGSDGFLL 413
LP+ + L+ + ++ +L
Sbjct: 442 SGGGLPIGVQLIGNYFAEAKIL 463
>gi|57233937|ref|YP_182046.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dehalococcoides
ethenogenes 195]
gi|109829686|sp|Q3Z6V3.1|GATA_DEHE1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|57224385|gb|AAW39442.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides
ethenogenes 195]
Length = 486
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 175/426 (41%), Gaps = 47/426 (11%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H PL+G+ A+KD+ G T + + A V + GA +GKT M
Sbjct: 67 HIRPLTGIPMALKDVLCTKGIRTTCSS--RMLENFVPPYNAHVVDKLAEEGAVLLGKTNM 124
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + EN + T NP +VPGGSS GSA V A FSLG+DTGGS+R PAS
Sbjct: 125 DEFAMGSSTENSAFFTTHNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPAS 184
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+C + G +PS+ VS G++ A S D +G F D V + D + P
Sbjct: 185 FCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKDVLDCALVMNAIAGFDDRDSTSVPQT 244
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
CL D +G V K + H + I + + D + L +
Sbjct: 245 APDFSSCL-------DGDIKGFKLGVPKEYFSHNMRADI-AEKINDALGVLSGL--GASV 294
Query: 264 EQEYSIPS---------LAALSSAMRLLQRYE-------FKNNHGDWVTTVK---PDLGP 304
++E S+P + A S A L RY+ + W K GP
Sbjct: 295 DREVSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGP 354
Query: 305 GISERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPP----P 355
+ R+ SA D Q V+T + + + L+ PT P P
Sbjct: 355 EVKRRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEKYDALITPTTPNLPFSIGE 414
Query: 356 KLQMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
KL DP E++ ++ ++IAG+ +SIP G D LPV + ++ K +D ++
Sbjct: 415 KLS-DP--FEMYMCDTCTIPINIAGLPA---ISIPAGFVDGLPVGLQIIGKPFADQTIMR 468
Query: 415 LVETLH 420
+
Sbjct: 469 IAHAFQ 474
>gi|399018160|ref|ZP_10720345.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398101946|gb|EJL92143.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 390
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
D+ + A + +F L SG T AIKD D+ G T G + A A
Sbjct: 10 DNAHNALVARF---------HLGGSGPTVAIKDCIDIQGMQT-RGGSAALADAAPAAVHA 59
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V +L G K M E+AY + G N GTP NP P R+PGGSSSG A AVGA
Sbjct: 60 DVVRRLLDAGWQITAKANMHELAYGMTGINDWSGTPLNPQDPARMPGGSSSGCAAAVGAG 119
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
LVD ++G+DTGGS+R+PA+ CG+ GF+PS VS +G P + D VG FA
Sbjct: 120 LVDVAIGSDTGGSIRLPAACCGVIGFKPSFGRVSRSGAYPQHSTLDCVGPFA 171
>gi|302387682|ref|YP_003823504.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
saccharolyticum WM1]
gi|302198310|gb|ADL05881.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium
saccharolyticum WM1]
Length = 498
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 174/396 (43%), Gaps = 65/396 (16%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PL+G+ A+KD + G T G+ D+ ++ TA AV + GA +GKT M
Sbjct: 73 PLAGVPVAVKDNICIQGMKTTCGSKILSDFVPSY-----TASAVENLKKAGAVILGKTNM 127
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A E YG NP PD VPGGSS GS AV A ++LG+DTGGS+R PAS
Sbjct: 128 DEFAMGSTTETSAYGVTRNPWNPDHVPGGSSGGSCAAVAAAECFYALGSDTGGSIRQPAS 187
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD-DVNLVRPS 202
+CG+ G +P++ +S G+I S D +G A D + VL + D V +
Sbjct: 188 FCGVTGLKPTYGTISRYGLIAYGSSLDQIGPVAKDVTDCAAILEVLASHDEKDSTSVERN 247
Query: 203 QVIFA----EDCLQLS-SIPSDRVTQGLVKSVEK---------LFGGHIIENVILGDYVK 248
F ED + IP+D + QGL V++ + G I+E LG V+
Sbjct: 248 DCDFTQALKEDVKGMRIGIPADYLGQGLDPEVKEAVLKAAGVLVEKGAIVETFDLG-MVE 306
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRL------LQRYEFKNNHGDWVTTVKPDL 302
+P+ Y I S A S+ R + +++ HG + +
Sbjct: 307 YAIPAY------------YVIASAEASSNLSRFDGVKYGYRAKDYEGLHGMYKKSRSQGF 354
Query: 303 GPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP 351
GP + R+ ++A A + K ++ A + +++ P P
Sbjct: 355 GPEVKRRIMLGSFVLSSGYYDAYYLKALR------TKALIKKAFDQAFSVYDVILGPASP 408
Query: 352 GPPPKLQ---MDPSALEVFRARAFSL-LSIAGVSGF 383
PKL DP L+++ +++ +++AG+ G
Sbjct: 409 STAPKLGESLSDP--LKMYLGDIYTISVNLAGLPGL 442
>gi|146303538|ref|YP_001190854.1| amidase [Metallosphaera sedula DSM 5348]
gi|145701788|gb|ABP94930.1| Amidase [Metallosphaera sedula DSM 5348]
Length = 388
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 177/416 (42%), Gaps = 40/416 (9%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+S Y AF+ ++ PL+GLTF +KD+ + G T G+ + A
Sbjct: 9 NSQYNAFITLHEMR----GRDGPLTGLTFGVKDVIETSGVRTTAGS--RILLDNVPKRNA 62
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V +LS G T +GKT E A + G NP DR+ GGSS GSAVAV
Sbjct: 63 LIVDRILSMGGTILGKTNTHEFAVGATNTSSVAGPARNPRDRDRISGGSSGGSAVAVALN 122
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+VD +GTDTGGSVR+PAS CG+ GF+PS+ +GVIP + S DT+G+ D + L
Sbjct: 123 MVDVGVGTDTGGSVRIPASLCGVIGFKPSYGLFPMSGVIPFSWSLDTLGFLTRDHETL-- 180
Query: 185 VGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
RVL+ L AE P R G+ +
Sbjct: 181 -WRVLVALTP------------AEGKKAYVRSPRTRPRVGV---------------FLFD 212
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSS-AMRLLQRYEFKNNHGDWVTTVKPDLG 303
D KD + + + + ++P++ A R++ E + H W+ + +
Sbjct: 213 DSTKDLLEKAMEYFPQA---RPVNLPNMIRYGRWARRVIATSEGASYHLTWLRSKEEMYF 269
Query: 304 PGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSA 363
P + + + + SA ++ + ++ D +++ PT P PK+
Sbjct: 270 PDVRDILKSGLSISAVDYVNALRLRKLILEEYMSVFKDVDVILSPTTRIPAPKISEVQGR 329
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ FR + + + G +SIP D LP+ + + + DG +L + +
Sbjct: 330 EKEFREDLVANTELFNLVGAPSISIPFFERDGLPLGLMISGEPYKDGVVLEVARQI 385
>gi|421596163|ref|ZP_16040046.1| allophanate hydrolase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271723|gb|EJZ35520.1| allophanate hydrolase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 257
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
+ A LPL G+ A+KD D G T P ++ T T A AV + + GA IGK
Sbjct: 62 ADAASLPLYGVPVAVKDNIDALGFPTTAACPAFSYTP---TRDATAVARLRAAGAIIIGK 118
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T +D+ A + G YG P N D VPGGSSSGSAVAVGA LV SLGTDT GS RV
Sbjct: 119 TNLDQFATGLVGVRSPYGIPRNSIRDDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRV 178
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
PA I G +PS +ST G++P ++ D + FA
Sbjct: 179 PAMLNNIVGLKPSLGMISTTGLVPACRTLDCISVFAL 215
>gi|423696671|ref|ZP_17671161.1| amidase family protein [Pseudomonas fluorescens Q8r1-96]
gi|388003770|gb|EIK65097.1| amidase family protein [Pseudomonas fluorescens Q8r1-96]
Length = 461
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 92/158 (58%), Gaps = 8/158 (5%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
QP+S L G+ A KD+FDV G T G R + A A V + G S
Sbjct: 72 QPASK-----LDGVPVAWKDMFDVAGSPTTAGAA-VRRDITPALLDANVVGLLAKAGMVS 125
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTG 135
+GKT + E AYS G N H+GTP NP D R+PGGSSSGSAVAV A +V ++GTDT
Sbjct: 126 VGKTNLSEFAYSGLGLNPHFGTPHNPVGLDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTA 185
Query: 136 GSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
GS+R+PA++ G+ G R S S GV P+A + D+VG
Sbjct: 186 GSIRIPAAFNGLVGVRSSCRRYSREGVFPLAHTLDSVG 223
>gi|289548231|ref|YP_003473219.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Thermocrinis
albus DSM 14484]
gi|289181848|gb|ADC89092.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermocrinis albus
DSM 14484]
Length = 482
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 189/428 (44%), Gaps = 68/428 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD +V+G T + + + A + + GA +GKT MDE
Sbjct: 66 PLYGIPVAVKDNINVEGTRTTCASR--ILENYVSPYDAEVIRRLKEAGAIVVGKTNMDEF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + E + NP RVPGGSS GSAVAV SLG+DTGGS+R PAS+CG
Sbjct: 124 AMGSSTEYSAFFPTRNPWDTGRVPGGSSGGSAVAVAVLSAPLSLGSDTGGSIRQPASFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G +P++ VS G++ A S D +G FA + +D+ L+ +VI
Sbjct: 184 VLGLKPTYGRVSRYGLVAFASSLDQIGPFA--------------RRTEDMALIL--EVIS 227
Query: 207 AEDCLQLSSIPSD--RVTQGLVKSVEKLFGG--HIIENVILGDYVKDKVPSLQHFLSEGN 262
D +S P + R T+ + K ++ L G + + VK+ + +L +
Sbjct: 228 GYDPKDSTSAPKEVPRYTEEIKKDIKGLKVGVPREFTEYPVEEGVKEIFDNFLRWLEKNG 287
Query: 263 KE--------QEYSIPS--LAALSSAMRLLQRY----------EFKNNHGDWVTTVKPDL 302
E +YSIP+ + A S A L RY ++ + + T
Sbjct: 288 CEVTEVSLPHVKYSIPAYYVIAPSEASSNLARYDGVRYGYRAKDYNSIEELYAKTRDEGF 347
Query: 303 GPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP 351
GP + R+ ++A A K V+ +R ++V PT P
Sbjct: 348 GPEVKRRILLGTFALSAGYYDAYYLKAMK------VRALIRRDFEEAFRKVDLIVSPTSP 401
Query: 352 G---PPPKLQMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHG 407
P + DP ++++ + F++ +++A + G +SIP G+ + LPV + L+ K
Sbjct: 402 TVAFPFGERTQDP--IQMYLSDIFTVSVNLANLPG---LSIPAGMWNGLPVGVQLIGKAF 456
Query: 408 SDGFLLNL 415
+ LL +
Sbjct: 457 DEALLLRV 464
>gi|408381173|ref|ZP_11178723.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanobacterium
formicicum DSM 3637]
gi|407816438|gb|EKF87000.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanobacterium
formicicum DSM 3637]
Length = 475
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 199/419 (47%), Gaps = 63/419 (15%)
Query: 28 LSGLTFAIKDIFDV-DGHVTGFGNPDWART--HSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ IK +V D H+T +RT + + A V + + IG T MD
Sbjct: 83 LAGMVVGIKSNINVEDFHITA-----ASRTLENYQGSYDATVVSRIKAEDGIIIGMTNMD 137
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A + E +G NP AP R+PGGSS GSA A+ A + D +LG+DTGGS+R PAS+
Sbjct: 138 EFAAGSSTETSFFGHTDNPAAPGRIPGGSSGGSAAAIAAGMCDLALGSDTGGSIRNPASH 197
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-------------- 190
CG+ GF+P++ AVS G++ +A SFD +G F+ D + + V+
Sbjct: 198 CGVMGFKPTYGAVSRQGLLDLAMSFDQIGPFSRDASGIALMLEVIAGEDRRECTTIDWNV 257
Query: 191 -----QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
+ D N ++ ++ ++ +S P + + + +++ G ++E + D
Sbjct: 258 PEFTSSITDPENALKGMKLGVVKEFFDVSDGPIVNIIEDRINQMQEA-GAEVVE--LSFD 314
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV------- 298
Y+K +P+ Y + + SA R +Y+ + +G+ + V
Sbjct: 315 YLKLCLPT-------------YYLINYVEFFSATR---KYDGR-KYGERIEEVCGEEVLR 357
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
+ +G IS++ + S + + ++ +R ++ LL D +LV PTVP P KL
Sbjct: 358 RIQMGSYISQKEF-----SGKYYNKALQARSLIRKEITGLLKDVDVLVGPTVPKLPHKL- 411
Query: 359 MDPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
++LE A+ +L+ IA ++G S P G + +PV + AK D ++ L+
Sbjct: 412 --GTSLEPMEMYAYDILTVIANLAGIPAASTPAGDVNGIPVGMQFQAKPLDDEKIVQLM 468
>gi|306842156|ref|ZP_07474825.1| amidase [Brucella sp. BO2]
gi|306287743|gb|EFM59174.1| amidase [Brucella sp. BO2]
Length = 471
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G +IKD+FDV G T G+ R A A V + + GA IGKT M E
Sbjct: 78 PLDGRIVSIKDLFDVAGEPTLAGSV-VRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEF 136
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+ G
Sbjct: 137 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 196
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVG 173
+ GF+P+ + G P+A S D+VG
Sbjct: 197 LVGFKPTARRIPLEGAFPLAPSLDSVG 223
>gi|384429834|ref|YP_005639195.1| glu-trnAgln amidotransferase a subunit [Xanthomonas campestris pv.
raphani 756C]
gi|341938938|gb|AEL09077.1| glu-trnAgln amidotransferase a subunit [Xanthomonas campestris pv.
raphani 756C]
Length = 486
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 168/399 (42%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS-GGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R SA + AV+ LS GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAA--LRAQSAPATRDAAVVQRLSDAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N+HYGT NP + GGSS GSA AV A V F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNEHYGTTANPHDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+H + GV P + D VG FA L RV V+
Sbjct: 226 VYGLRPTHGTLPLEGVFPFVDALDVVGPFATSVADLRRVYEVM----------------- 268
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ S+ + R+ Q GG N+ + L L+
Sbjct: 269 HGHPVPACSVETLRIAQ---------LGGWFQRNLD-----PELEAGLGTLLTAIGSTTI 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H + ++T P +R+ ++ A + Q
Sbjct: 315 MELPDAERARAAAFVLTAAEGGHRHRNALSTQAAQFDPATRDRLLAGLQLPASAVADAQQ 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ L +L+ P PG P++ + ++ A + L I G++
Sbjct: 375 FAHWFARAMRMLWDRVDVLIAPATPGVAPRIDQESIIIDGLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|328543589|ref|YP_004303698.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum
SL003B-26A1]
gi|326413334|gb|ADZ70397.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum
SL003B-26A1]
Length = 607
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 185/403 (45%), Gaps = 36/403 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G T PD+ H A +T A L + GA +GKT +D+
Sbjct: 87 PLWGVPFAVKDNIDVAGMPTTAACPDYL-YHPAEDATVVARLK--AAGAIVVGKTNLDQF 143
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G Y P N P VPGGSSSGSAVAV +V FSLGTDT GS RVPA+
Sbjct: 144 ATGLVGVRSPYPIPRNAVDPALVPGGSSSGSAVAVAQGIVTFSLGTDTAGSGRVPAALND 203
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW--DPKILNRVGRVLLQLADDVNLVRPSQV 204
+ G +PS ++S GV+P ++ DTV FA + AD + RP+
Sbjct: 204 LVGLKPSLGSLSATGVVPACRTLDTVSIFAHTVEDAYAAFAVAAAHDPADAYSRHRPAG- 262
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
L++ P+ R+ G+ ++ ++ F G ++ + D + + + E + E
Sbjct: 263 -------PLAAWPA-RLAVGVPRADQRRFFGDAVQADSYTATLAD-IAARGAEIVEIDFE 313
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTSAQK--- 320
Y +L L + +RY + +P+ L P + A + SA
Sbjct: 314 PFYETAAL--LYEGAWVAERYAAIRT----IMETRPEILHPTTRLIIGGAAKLSAADAFA 367
Query: 321 -IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF--RARAFSLLSI 377
+ +++K ++ L+AL L +PT+P + +D A + +R + +
Sbjct: 368 GLYRLEALKRQVEPVLAAL----DCLCVPTIPC---FVSLDEIAADPVTPNSRLGTYTNF 420
Query: 378 AGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ C +++P+ D P ++LLA G DGFL L +
Sbjct: 421 VNLLDLCGIAVPVARRRDGRPGNVTLLAAAGRDGFLAGLARAI 463
>gi|381150586|ref|ZP_09862455.1| allophanate hydrolase [Methylomicrobium album BG8]
gi|380882558|gb|EIC28435.1| allophanate hydrolase [Methylomicrobium album BG8]
Length = 602
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
Y A +E+ S +LPL G+ FAIKD D+ G T P +A +A V
Sbjct: 59 YAAALER------KSPDELPLYGIPFAIKDNIDLAGLETTAACPSFAYRPE---KSAFVV 109
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
+++ GA IGKT +D+ A + G YG N D + GGSSSGSAVAV LV
Sbjct: 110 QRLIAAGAIPIGKTNLDQFATGLVGTRSPYGICRNAFDADYIAGGSSSGSAVAVAKGLVS 169
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
F+LGTDT GS RVPA++ + G +PS +S +GV+P QS D V FA + RV +
Sbjct: 170 FALGTDTAGSGRVPAAFNNLVGVKPSRGLLSASGVVPACQSLDCVSIFALSAQDAERVLQ 229
Query: 188 VLLQLADDVNL-VRP 201
V Q D ++L RP
Sbjct: 230 V-AQAYDRLDLYARP 243
>gi|398920559|ref|ZP_10659373.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398167734|gb|EJM55775.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 374
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G AIKD D+ GH T G+ +A AAT A V A+L G +GKT + E+A+
Sbjct: 13 NGKRVAIKDSIDIAGHPTRSGSRAFADA-PAATKNAEVVDAILDAGWQIVGKTNLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CGI
Sbjct: 72 GVTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G +P++ VS G P+ S D VG FA
Sbjct: 132 GLKPTYGRVSRIGAHPLESSLDCVGPFA 159
>gi|62289541|ref|YP_221334.1| amidase [Brucella abortus bv. 1 str. 9-941]
gi|82699470|ref|YP_414044.1| amidase [Brucella melitensis biovar Abortus 2308]
gi|161511133|ref|NP_540277.2| amidase [Brucella melitensis bv. 1 str. 16M]
gi|189023798|ref|YP_001934566.1| amidase [Brucella abortus S19]
gi|237815038|ref|ZP_04594036.1| Indoleacetamide hydrolase [Brucella abortus str. 2308 A]
gi|260545702|ref|ZP_05821443.1| amidase [Brucella abortus NCTC 8038]
gi|260757562|ref|ZP_05869910.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260761387|ref|ZP_05873730.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|376273692|ref|YP_005152270.1| amidase [Brucella abortus A13334]
gi|384444672|ref|YP_005603391.1| Indoleacetamide hydrolase [Brucella melitensis NI]
gi|423167280|ref|ZP_17153983.1| hypothetical protein M17_00970 [Brucella abortus bv. 1 str. NI435a]
gi|423170343|ref|ZP_17157018.1| hypothetical protein M19_00876 [Brucella abortus bv. 1 str. NI474]
gi|423173577|ref|ZP_17160248.1| hypothetical protein M1A_00975 [Brucella abortus bv. 1 str. NI486]
gi|423177137|ref|ZP_17163783.1| hypothetical protein M1E_01379 [Brucella abortus bv. 1 str. NI488]
gi|423179774|ref|ZP_17166415.1| hypothetical protein M1G_00874 [Brucella abortus bv. 1 str. NI010]
gi|423182906|ref|ZP_17169543.1| hypothetical protein M1I_00875 [Brucella abortus bv. 1 str. NI016]
gi|423186152|ref|ZP_17172766.1| hypothetical protein M1K_00970 [Brucella abortus bv. 1 str. NI021]
gi|423189291|ref|ZP_17175901.1| hypothetical protein M1M_00973 [Brucella abortus bv. 1 str. NI259]
gi|62195673|gb|AAX73973.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615571|emb|CAJ10554.1| Amidase:ATP/GTP-binding site motif A (P-loop) [Brucella melitensis
biovar Abortus 2308]
gi|189019370|gb|ACD72092.1| Amidase [Brucella abortus S19]
gi|237789875|gb|EEP64085.1| Indoleacetamide hydrolase [Brucella abortus str. 2308 A]
gi|260097109|gb|EEW80984.1| amidase [Brucella abortus NCTC 8038]
gi|260667880|gb|EEX54820.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260671819|gb|EEX58640.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|349742668|gb|AEQ08211.1| Indoleacetamide hydrolase [Brucella melitensis NI]
gi|363401298|gb|AEW18268.1| amidase [Brucella abortus A13334]
gi|374541269|gb|EHR12765.1| hypothetical protein M19_00876 [Brucella abortus bv. 1 str. NI474]
gi|374541703|gb|EHR13197.1| hypothetical protein M17_00970 [Brucella abortus bv. 1 str. NI435a]
gi|374541817|gb|EHR13308.1| hypothetical protein M1A_00975 [Brucella abortus bv. 1 str. NI486]
gi|374549619|gb|EHR21061.1| hypothetical protein M1G_00874 [Brucella abortus bv. 1 str. NI010]
gi|374550138|gb|EHR21577.1| hypothetical protein M1I_00875 [Brucella abortus bv. 1 str. NI016]
gi|374551782|gb|EHR23212.1| hypothetical protein M1E_01379 [Brucella abortus bv. 1 str. NI488]
gi|374557834|gb|EHR29229.1| hypothetical protein M1M_00973 [Brucella abortus bv. 1 str. NI259]
gi|374559540|gb|EHR30928.1| hypothetical protein M1K_00970 [Brucella abortus bv. 1 str. NI021]
Length = 438
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL G +IKD+FDV G T G+ H A + A++ + + GA IGKT M
Sbjct: 45 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 101
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 102 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 161
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GF+P+ + G P+A S D+VG
Sbjct: 162 NGLVGFKPTARRIPLEGAFPLAPSLDSVG 190
>gi|325105976|ref|YP_004275630.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pedobacter
saltans DSM 12145]
gi|324974824|gb|ADY53808.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Pedobacter saltans DSM 12145]
Length = 493
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 197/445 (44%), Gaps = 50/445 (11%)
Query: 6 SDYGAFMEKFVLQPSSSAHQL----------PLSGLTFAIKDIFDVDGHVTGFGNPDWAR 55
SD AF+E F + A + L+G+ IKD GH +
Sbjct: 57 SDLNAFLEVFSEESIQKAEIIQEKIINGTAGKLAGMVIGIKDNISYKGHKISAASKML-- 114
Query: 56 THSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSS 115
+ A +A V +L+ A IG+ DE A + E ++G N ++V GGSS
Sbjct: 115 ENYTAVYSATVVDRLLAEDAIIIGRLNCDEFAMGASNETSYFGPVKNFANRNKVSGGSSG 174
Query: 116 GSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF 175
GSAVAV A + SLGTDTGGS+R PA++CG+ G +P++S VS GVI A SFD VG
Sbjct: 175 GSAVAVQANMCLASLGTDTGGSIRQPAAFCGVIGIKPTYSRVSRYGVIAYASSFDQVGPI 234
Query: 176 AWDPKILNRVGRVLLQLADDVNLVR--------------PSQVIFAEDCLQLSSIPSD-- 219
+ + VL ++ N+ P ++ + E+ L + +
Sbjct: 235 TRSVEDAALLLEVLAGRDENDNISSGKAVPEYSRFSKNTPKKIAYIEETLNSEGLDPEIK 294
Query: 220 RVTQGLVKSVEKLFGGHIIENVILG--DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSS 277
R +G ++ ++ L GHI+E V DYV L S N + +
Sbjct: 295 RNIEGQIEKLKVL--GHIVEPVSFKYLDYVVAAYYILTTAESSSNLSRYDGVHFGYRSEK 352
Query: 278 AMRLLQRYEFKNNHGDWVTTVKPDLGPG---ISERVWEAVRTSAQKIDVCQSVKTELRAA 334
A L Y+ + G + VK + G +S ++A AQK V+ ++
Sbjct: 353 ATDLESTYKLSRSEG-FGEEVKRRIMLGTFVLSAGYYDAYYARAQK------VRRLIKEK 405
Query: 335 LSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLG 391
+ +L ++ ++ PT PGP + + DP LE + A F++ IA ++G +S+P G
Sbjct: 406 MEEILDNYDFVLTPTTPGPAFDIGAKKTDP--LEAYLADIFTV--IASLTGLPAISVPCG 461
Query: 392 -LHDNLPVAISLLAKHGSDGFLLNL 415
+ LP+ I + K + LL+
Sbjct: 462 TTEEGLPIGIQFIGKSFEEDKLLSF 486
>gi|225627080|ref|ZP_03785118.1| Indoleacetamide hydrolase [Brucella ceti str. Cudo]
gi|340790211|ref|YP_004755676.1| amidase [Brucella pinnipedialis B2/94]
gi|17983355|gb|AAL52541.1| glutamyl-tRNA(gln) amidotransferase subunit a [Brucella melitensis
bv. 1 str. 16M]
gi|225617915|gb|EEH14959.1| Indoleacetamide hydrolase [Brucella ceti str. Cudo]
gi|340558670|gb|AEK53908.1| amidase [Brucella pinnipedialis B2/94]
Length = 471
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL G +IKD+FDV G T G+ H A + A++ + + GA IGKT M
Sbjct: 78 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 134
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 135 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 194
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GF+P+ + G P+A S D+VG
Sbjct: 195 NGLVGFKPTARRIPLEGAFPLAPSLDSVG 223
>gi|261218573|ref|ZP_05932854.1| amidase [Brucella ceti M13/05/1]
gi|261320578|ref|ZP_05959775.1| amidase [Brucella ceti M644/93/1]
gi|260923662|gb|EEX90230.1| amidase [Brucella ceti M13/05/1]
gi|261293268|gb|EEX96764.1| amidase [Brucella ceti M644/93/1]
Length = 445
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL G +IKD+FDV G T G+ H A + A++ + + GA IGKT M
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 168
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GF+P+ + G P+A S D+VG
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG 197
>gi|149916148|ref|ZP_01904670.1| hypothetical protein RAZWK3B_10832 [Roseobacter sp. AzwK-3b]
gi|149810003|gb|EDM69852.1| hypothetical protein RAZWK3B_10832 [Roseobacter sp. AzwK-3b]
Length = 450
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 182/404 (45%), Gaps = 49/404 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A KD+FD+ G VT G RT + A + AP + G S G M E
Sbjct: 67 PLDGVPVAWKDLFDLKGRVTTAGAI-VTRTDTPAKADAPVIATAHRAGMISTGTVNMTEF 125
Query: 87 AYSINGENKHYGTPTNPCAPD---RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
A+S G N HYGTP N AP R PGGSSSGS V V A +V S+GTDTGGSVR+PAS
Sbjct: 126 AFSGIGLNPHYGTPRNVHAPTGQRRSPGGSSSGSGVVVSAGIVPISIGTDTGGSVRIPAS 185
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRVGRVLLQLADDVNLVR 200
+ G+ G++ S GV P+A+S DT+G A D + + V R D +
Sbjct: 186 FNGVVGYKTSSGRYPMDGVYPLAKSLDTIGPLAHTVADCALFDAVLR-----GKDTPEAQ 240
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P+ V D L IP + GL SV F ++ +
Sbjct: 241 PADV----DGLSF-IIPDEIFLDGLAPSVAANFNA-----------------TVDRLETA 278
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE---RVWEAVR-- 315
G + + S+P L+ L+ L+ + F + GP ++ RV +R
Sbjct: 279 GARIKRISLPELSELTD---LIVEHGFLAGAEALALHRERVCGPAAAQMDARVVRRIRLA 335
Query: 316 --TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV-FRARAF 372
SA + + Q +T + A+ +A +G I++ PT +++ + EV FR
Sbjct: 336 ESMSAVDVLLLQQARTRMMASTAARIG-RSIVLCPTTATTAMEIEPLEADQEVFFRHNGL 394
Query: 373 SL--LSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLL 413
+L S+ +C VSIP G D +P L A G D LL
Sbjct: 395 ALRNTSLGNFLDWCGVSIPNGTDADGMPTGFLLSAPTGQDTALL 438
>gi|158312532|ref|YP_001505040.1| amidase [Frankia sp. EAN1pec]
gi|158107937|gb|ABW10134.1| Amidase [Frankia sp. EAN1pec]
Length = 523
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 186/414 (44%), Gaps = 40/414 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL FA+KD D+ G T G PD++R + TAPAV +L+ GA +GKT +D+
Sbjct: 104 PLFGLPFAVKDNIDIAGLPTTAGCPDFSRLPA---GTAPAVARLLAAGAVCVGKTNLDQF 160
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A ++G YG P +P P + GGSSSGS VAV LV F++GTDT GS RVPA+
Sbjct: 161 ATGLSGTRSPYGIPASPFDPYMIAGGSSSGSGVAVADGLVTFAVGTDTAGSGRVPAALTN 220
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR--PSQV 204
G +PS VST GV+P +S D FA RV V+ ++ R P
Sbjct: 221 TVGLKPSRGLVSTRGVVPACRSLDCPSVFALSVPDAYRVLSVMSGYDEEDPYSRRFPGLG 280
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKL-FGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
A + P V + V ++L F G + G V L++G
Sbjct: 281 SPAPGGAPRTGAPRTEVPRIGVPRADQLDFLGDAGAAAVFGVGV--------DLLADGGA 332
Query: 264 E-QEYSI-PSLAA---LSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR--- 315
E E + P L A L L +RY ++ TV PD GP ++ V +R
Sbjct: 333 EVTEIDLGPFLEAGTLLYGGPWLAERYAAVEA---FLQTV-PDAGP--ADPVHPVIRAVL 386
Query: 316 ------TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA 369
T A+ ++ R+A + D ++V+PTVP ++D + R
Sbjct: 387 EPGAGITGAEVFRGLTRLRALRRSAERTWV-DVDMVVVPTVPT---TYRIDAMLADPIRL 442
Query: 370 RAF--SLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
A + A + V++P+G LP ++LLA G D L E LH
Sbjct: 443 NANLGRYTTFANLLDLAAVAVPVGFAAGLPFGVTLLAPAGGDELLAAPAELLHR 496
>gi|91773613|ref|YP_566305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanococcoides
burtonii DSM 6242]
gi|121684282|sp|Q12VH1.1|GATA_METBU RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|91712628|gb|ABE52555.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Methanococcoides
burtonii DSM 6242]
Length = 475
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 187/429 (43%), Gaps = 44/429 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVT--------GFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
PL+G+ AIKD G T G+ P A + + GA I
Sbjct: 60 PLAGVPIAIKDNISTKGLATTCSSKILEGYVPP----------YDAHVIERLKEAGAVII 109
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT MDE A + E+ YG NP +RVPGGSS GSA V A SLG+DTGGSV
Sbjct: 110 GKTNMDEFAMGTSTESSCYGVTLNPWDHERVPGGSSGGSAAVVAAGEAPISLGSDTGGSV 169
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLAD 194
R PA++CG+ G +P++ AVS G+I A S + +G A + +++ +G + +
Sbjct: 170 RCPAAFCGVVGLKPTYGAVSRYGLISYANSLEQIGPMATCVEDIAAVMDVIGGYDARDST 229
Query: 195 DVNLVRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIE-NVILGDYVKDKVP 252
++ Q +D L +P + +G+ E I + + + K +P
Sbjct: 230 SIDKKIDHQAALIDDVKGLKIGVPDEYFGEGVDSGTENAVWDAINKYEEMDASWEKVSMP 289
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLL-QRYEFKNNHGDW----VTTVKPDLGPGIS 307
+ ++ L+ Y+I A S+ R RY +N+ +W T + G +
Sbjct: 290 NTKYALA-----AYYTIAMSEASSNLARFDGTRYGPRNDGENWHVMASKTRAENFGKEVQ 344
Query: 308 ERVW---EAVRTSAQKIDVCQS--VKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDP 361
R+ A+ Q ++ V+T ++ + +L+ PT+P P K+ +M
Sbjct: 345 RRILLGTYALSAGYQDKYYLKALQVRTLVKQDFDRAFANFDVLMAPTMPLPAFKIGEMVE 404
Query: 362 SALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
L + ++ +++AGV C +S+P G D LPV + ++ H + L+ +
Sbjct: 405 DPLSQYLIDVNTVPMNLAGVP--C-ISVPCGSSDGLPVGLQIIGNHFDEAALIRAAYSFE 461
Query: 421 NTLKEELQR 429
R
Sbjct: 462 KNTDHHKAR 470
>gi|161618549|ref|YP_001592436.1| amidase [Brucella canis ATCC 23365]
gi|225852103|ref|YP_002732336.1| amidase [Brucella melitensis ATCC 23457]
gi|256264387|ref|ZP_05466919.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|260563637|ref|ZP_05834123.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260566837|ref|ZP_05837307.1| amidase [Brucella suis bv. 4 str. 40]
gi|261213589|ref|ZP_05927870.1| amidase [Brucella abortus bv. 3 str. Tulya]
gi|261221781|ref|ZP_05936062.1| amidase [Brucella ceti B1/94]
gi|261315204|ref|ZP_05954401.1| amidase [Brucella pinnipedialis M163/99/10]
gi|261317239|ref|ZP_05956436.1| amidase [Brucella pinnipedialis B2/94]
gi|261324697|ref|ZP_05963894.1| amidase [Brucella neotomae 5K33]
gi|261751907|ref|ZP_05995616.1| amidase [Brucella suis bv. 5 str. 513]
gi|261757795|ref|ZP_06001504.1| amidase [Brucella sp. F5/99]
gi|265988278|ref|ZP_06100835.1| amidase [Brucella pinnipedialis M292/94/1]
gi|265990694|ref|ZP_06103251.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994526|ref|ZP_06107083.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|265997745|ref|ZP_06110302.1| amidase [Brucella ceti M490/95/1]
gi|294851944|ref|ZP_06792617.1| aspartyl-tRNA(Asn)/glutamyl-tRNA amidotransferase subunit A
[Brucella sp. NVSL 07-0026]
gi|376274673|ref|YP_005115112.1| indoleacetamide hydrolase [Brucella canis HSK A52141]
gi|384210955|ref|YP_005600037.1| indoleacetamide hydrolase [Brucella melitensis M5-90]
gi|384408051|ref|YP_005596672.1| amidase [Brucella melitensis M28]
gi|161335360|gb|ABX61665.1| Indoleacetamide hydrolase [Brucella canis ATCC 23365]
gi|225640468|gb|ACO00382.1| Indoleacetamide hydrolase [Brucella melitensis ATCC 23457]
gi|260153653|gb|EEW88745.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260156355|gb|EEW91435.1| amidase [Brucella suis bv. 4 str. 40]
gi|260915196|gb|EEX82057.1| amidase [Brucella abortus bv. 3 str. Tulya]
gi|260920365|gb|EEX87018.1| amidase [Brucella ceti B1/94]
gi|261296462|gb|EEX99958.1| amidase [Brucella pinnipedialis B2/94]
gi|261300677|gb|EEY04174.1| amidase [Brucella neotomae 5K33]
gi|261304230|gb|EEY07727.1| amidase [Brucella pinnipedialis M163/99/10]
gi|261737779|gb|EEY25775.1| amidase [Brucella sp. F5/99]
gi|261741660|gb|EEY29586.1| amidase [Brucella suis bv. 5 str. 513]
gi|262552213|gb|EEZ08203.1| amidase [Brucella ceti M490/95/1]
gi|262765639|gb|EEZ11428.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|263001478|gb|EEZ14053.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094681|gb|EEZ18460.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|264660475|gb|EEZ30736.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294820533|gb|EFG37532.1| aspartyl-tRNA(Asn)/glutamyl-tRNA amidotransferase subunit A
[Brucella sp. NVSL 07-0026]
gi|326408598|gb|ADZ65663.1| amidase [Brucella melitensis M28]
gi|326538318|gb|ADZ86533.1| indoleacetamide hydrolase [Brucella melitensis M5-90]
gi|363403240|gb|AEW13535.1| Indoleacetamide hydrolase [Brucella canis HSK A52141]
Length = 445
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL G +IKD+FDV G T G+ H A + A++ + + GA IGKT M
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 168
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GF+P+ + G P+A S D+VG
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG 197
>gi|398835571|ref|ZP_10592932.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398216147|gb|EJN02703.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 459
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 180/402 (44%), Gaps = 36/402 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A KD+FD G T G+ W R A + A V G IGKT + E
Sbjct: 70 PLDGVPIAWKDLFDAQGTPTTAGSALW-RNAPPAFADAQLVARAARAGLVCIGKTNLSEF 128
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N HYGTP N P RVPGGSSSGSA+AV +V ++GTDT GS+RVPA+
Sbjct: 129 AFSGLGINAHYGTPVNTLHPGAARVPGGSSSGSALAVALGIVPLAMGTDTAGSIRVPAAL 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLAD-DVNLVRPSQ 203
G+ GF+ S + + GV ++++ D +G A D + VL ++ DV V P
Sbjct: 189 NGVVGFKSSSARYAFGGVTGLSETLDCLGPIARDVADCLALDPVLRGMSPVDVLAVAPGD 248
Query: 204 VIFAEDCLQLSSIPSD-----RVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
A + +++ + P D RVT G+ ++ E+ I+ V S +
Sbjct: 249 --GALEGIRIRA-PRDVLDDARVTPGVRRNTERALDALQRAGAIVDARPLQAVSSTFELI 305
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG-PGISERVWEAVRTS 317
+ + +L AL LLQ + T ++ G P ER E +
Sbjct: 306 A-----TRGWLGALEALERYRNLLQTSDAARIDARVRTRLQAANGFP--PERHAELM--- 355
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI 377
AQ+ + ++K EL A LV+P+V P L S+ E F + L +
Sbjct: 356 AQRWQLMAALKDELAGA---------ALVMPSVAHEAPLLAQVESSPEAFADTNLATLRL 406
Query: 378 AGVSGFCQ---VSIPLGLH-DNLPVAISLLAKHGSDGFLLNL 415
+ F +S+P+ D LP + L G D LL L
Sbjct: 407 TMLGSFLDLTALSLPISSDGDTLPTGLQLALPCGQDQALLTL 448
>gi|297623399|ref|YP_003704833.1| amidase [Truepera radiovictrix DSM 17093]
gi|297164579|gb|ADI14290.1| Amidase [Truepera radiovictrix DSM 17093]
Length = 437
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+ D G VT G AA PA + + GA +GKT M E+
Sbjct: 66 PLQGVPLALKDLMDTRGEVTAAGAKVLLERPPAAQDC-PAAERLAAAGAVFLGKTTMTEL 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N H+GTP N P R+PGGSSSGSAVAV + L ++G+DTGGSVR+PA++
Sbjct: 125 AFSGLGLNPHFGTPPNARDPSRIPGGSSSGSAVAVASGLACAAIGSDTGGSVRIPAAFNN 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVG 173
+ G + + AV AG +P++ + DT+G
Sbjct: 185 LVGLKTTDGAVPMAGCVPLSTTLDTLG 211
>gi|416407874|ref|ZP_11688328.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Crocosphaera watsonii WH 0003]
gi|357260813|gb|EHJ10162.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Crocosphaera watsonii WH 0003]
Length = 455
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 176/407 (43%), Gaps = 34/407 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD++G +T G+ + +S AT A A+ + + GA +G MDE A
Sbjct: 71 LTGVPFAVKNLFDIEGIITLAGS-KINKENSPATEDATAIKKLKAAGAILVGALNMDEYA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP R+ GGSS GSA AV A LV FSLG+DT GS+RVPA+ CG+
Sbjct: 130 YGFVTENSHYGATPNPHDLSRISGGSSGGSAAAVAASLVPFSLGSDTNGSIRVPAALCGV 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNLVRPSQVI 205
FG +P++ +S AG + S D +G F + + + VL D V P Q+
Sbjct: 190 FGLKPTYGRLSRAGTFLFSNSLDHIGGFTRSVRDMAAIFDVLQGEDQDDPVCTYLPPQLC 249
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-----KVPSLQHFLSE 260
F D++ G+ G I + GDY ++ + +++
Sbjct: 250 F------------DKLNDGI--------DGLTI--AVAGDYFQEGAETAALEAVETIAKL 287
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
N ++ SIP +A ++ E N H + + + D P +R
Sbjct: 288 LNTKEIISIPEAHRARAAAYIITACEGSNFHLENLRSRPQDFDPATRDRFLAGAFIPNTW 347
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLS 376
Q + R + + +++ PT P L + + + R
Sbjct: 348 YIQAQRFRRWYRDQVKEIFQKVDVIIAPTTPCVATTLGQEKMMINGEEILIRPNLGRFTQ 407
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G VS P+ + LP+ + L+A + +L + L L
Sbjct: 408 PLSFIGLPVVSFPILRANKLPLGVQLIAAPYQELKILQVAACLEEKL 454
>gi|21229770|ref|NP_635687.1| amidase [Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66766646|ref|YP_241408.1| amidase [Xanthomonas campestris pv. campestris str. 8004]
gi|21111262|gb|AAM39611.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66571978|gb|AAY47388.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
campestris str. 8004]
Length = 486
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 167/399 (41%), Gaps = 38/399 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS-GGATSIGKTIMDEM 86
L+G+ F +KD+FDV G VT G R SA + AV+ LS GA +G MDE
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAA--LRAQSAPATRDAAVVQRLSDAGAVLVGTANMDEF 165
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYGT NP + GGSS GSA AV A V F+LG+DT GS+RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCG 225
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G RP+H + GV P + D VG FA L RV V+
Sbjct: 226 VYGLRPTHGTLPLQGVFPFVDALDVVGPFATSVADLRRVYEVM----------------- 268
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ S+ + R+ Q GG N+ + L L+
Sbjct: 269 HGHPVPACSVETLRIAQ---------LGGWFQRNLD-----PELEAGLGTLLTAIGSTTI 314
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +L E + H + ++T P +R+ ++ A + Q
Sbjct: 315 MELPDAERARAAAFVLTAAEGGHRHRNALSTQAAQFDPATRDRLLAGLQLPASAVADAQQ 374
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
A+ L +L+ P PG P++ + ++ A + L I G++
Sbjct: 375 FAHWFARAMRTLWDRVDVLIAPATPGVAPRIDQESIIIDGLPVSARANLGIFTQPLGLAA 434
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
++ PL LP+ + L+A G + L L L
Sbjct: 435 CPVLAAPLPRPGRLPLGVQLIAAPGREDRLFALAAQLER 473
>gi|167840789|ref|ZP_02467473.1| indole acetimide hydrolase [Burkholderia thailandensis MSMB43]
gi|424906843|ref|ZP_18330338.1| indole acetimide hydrolase [Burkholderia thailandensis MSMB43]
gi|390927849|gb|EIP85256.1| indole acetimide hydrolase [Burkholderia thailandensis MSMB43]
Length = 467
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
+LPL+G+ F IKD T +P A +AT A AV +L GA +GK M
Sbjct: 71 RRLPLAGVPFVIKDNLFTADMPTHAASP--ALLGFSATRNATAVQQLLDAGAVPLGKANM 128
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
E+A+ I N H+G NP P R+ GGSS G+A AV A + F LGTDTGGSVR+PA+
Sbjct: 129 HELAFGITSANGHFGAVRNPHDPARIAGGSSGGTACAVAAG-IPFGLGTDTGGSVRIPAA 187
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+CG+ G RP+ ST GV+ ++ + DTVG A
Sbjct: 188 FCGVAGLRPTPRRYSTEGVLALSPTRDTVGPIA 220
>gi|39934478|ref|NP_946754.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009]
gi|39648327|emb|CAE26847.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopseudomonas
palustris CGA009]
Length = 608
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 178/399 (44%), Gaps = 23/399 (5%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G T P +A T S TA AV +L GA IGKT +D+
Sbjct: 71 PLWGIPFAVKDNIDVAGLPTTAACPGFASTPS---ETAFAVQRLLDAGAVLIGKTNLDQF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G Y P N P VPGGSSSGSAV V LV F+LGTDT GS RVPA+
Sbjct: 128 ATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVVVAHGLVTFALGTDTAGSGRVPAALNN 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +PS +VS+ G++P ++ DT+ FA + V V+ + RP
Sbjct: 188 IVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVADAHAVYGVIAAFDREDPWSRP----H 243
Query: 207 AEDCLQLSSI-PSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A +L+++ P R+ GL + F + V D + + +
Sbjct: 244 AGAPARLNALSPGLRI--GLPNPASRKFADDLESEHAFDLAVADLATVVPGPVRAVDLTP 301
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ + SL L S + +RY+ + V P+L ++ ++ + +
Sbjct: 302 LFDVASL--LYSGPWVAERYQAIRH----VIETTPELLHPVTRKIIGSASAFSAADAFGG 355
Query: 326 SVK-TELRAALSALLGDHGILVIPTVPGPP--PKLQMDPSALEVFRARAFSLLSIAGVSG 382
+ ELR A A+ +L++PT P P L+ DP + + + +
Sbjct: 356 LYRLAELRHAADAIWSSVDVLMVPTYPRPRTIADLESDPIGPN---SELGTYTNFVNLLD 412
Query: 383 FCQVSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLH 420
C +++P D+ P ++L+A G D L L LH
Sbjct: 413 LCALAVPGRFRDDGFPSGVTLIAPAGHDDLLAVLGGRLH 451
>gi|340778538|ref|ZP_08698481.1| amidase [Acetobacter aceti NBRC 14818]
Length = 429
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 150/334 (44%), Gaps = 39/334 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F +KD+FD++G VT G+ + AT A V +++ GA + MDE A
Sbjct: 68 LAGVPFGVKDLFDMEGLVTTAGSV-VLNGNPPATQDAAVVQRLVAAGAIPVATLNMDEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y + EN HYGT NP D + GGSS GSA +V A L+ F+LG+DT GS+RVPAS CG+
Sbjct: 127 YGFSTENAHYGTTRNPRNTDCLAGGSSGGSAASVAAGLLPFALGSDTNGSIRVPASLCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL----LQLADDVNLVRPSQ 203
+G RP+ + GV P S DTVG FA L RV + L+ +DV +R ++
Sbjct: 187 WGLRPTQGLLPLDGVYPFVASLDTVGPFAGTVTDLQRVFEAMNGHALEEIEDVRSLRIAR 246
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+ GG +++V + D + + F
Sbjct: 247 L-----------------------------GGWFLQDV--DPAILDGIDRILAFF---GS 272
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+E + +A ++ L+ E N H + D P +R+ + +
Sbjct: 273 HKEVDLAEVARARASAFLISAAEGGNLHLPRLRKTPMDYDPATRDRLIAGAMLPSAAVVQ 332
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ R L L +L+ P PGP P++
Sbjct: 333 AHRFRNWFRTGLHELFEQVDVLLAPATPGPAPRI 366
>gi|385674392|ref|ZP_10048320.1| enantiomer-selective amidase [Amycolatopsis sp. ATCC 39116]
Length = 438
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 191/406 (47%), Gaps = 65/406 (16%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+ DV G T G+ + T AT+ A V + + GA +GKT E+
Sbjct: 85 PLHGVPVAVKDVIDVRGLPTTAGSRQF--TDHVATADADCVRRLRAAGAIVLGKTATHEI 142
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ G+ G NP P R+ GGSSSGSA AV A +V +LGTDTGGSVR+PA+ CG
Sbjct: 143 AFGPTGDRAANGPARNPYDPGRMTGGSSSGSAAAVAAGVVPLALGTDTGGSVRIPAACCG 202
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRVGRVLLQLADDVNLVRPSQ 203
I G +P+H A+ST GV+P+A S DTVG A D ++L V V+ +P
Sbjct: 203 IVGLKPTHGALSTHGVLPLAPSLDTVGPLARTAADARLLWTV----------VSGAKPGN 252
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+++ +P D + P + + E +
Sbjct: 253 -----KTSRVAWLPP--------------------------DTIHPTAPEVTATVRERLR 281
Query: 264 E-QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERV--------WEA 313
+ E +P AL +A +Q E H + + +PDL G + +R+ WE
Sbjct: 282 DLDEVVVPQAEALRAAYAAIQGSEAYAVHAERLAD-RPDLFGDEVRDRLRAGGEVRGWEY 340
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFS 373
VR + ++ ++R + LL +HGI +PT P P P L S + RA S
Sbjct: 341 VR--------ARELRDQVRGEVLDLLREHGIFALPTTPLPAPPLDARTSDVGDVRAALLS 392
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
L S V G +S+P GL LPV + L+ GS+ LL + E L
Sbjct: 393 LTSPWSVLGLPALSVPAGLVGELPVGLQLVGPPGSEHDLLTIAEHL 438
>gi|440752298|ref|ZP_20931501.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
TAIHU98]
gi|440176791|gb|ELP56064.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
TAIHU98]
Length = 443
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 173/402 (43%), Gaps = 38/402 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD+ G VT G+ R H AA A A+ + + GA +G T MDE A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HY NP P RV GGSS GSA AV A LV +LG+DT GSVRVPA+ CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQVI 205
G +P+ VS G+ S D +G+F+ + + + + + L +N + ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLNGLEGVKIA 246
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A+D Q + P V + + E+L Q
Sbjct: 247 LADDYFQQGAEPE--VIEAVTAIAERL-----------------------------GVSQ 275
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ +IP A +A ++ E N H + T D P +R + Q
Sbjct: 276 KITIPETARARAAAYIITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQ 335
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGVS 381
+ R L + + I++ PT+P P L ++ ++ + R
Sbjct: 336 RFRRWYRDRLREIFAEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPFSFI 395
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L + L L
Sbjct: 396 GLPALSLPIKRPSQLPLGLQIIAAPDREDLILRVARVLEEML 437
>gi|398956909|ref|ZP_10677027.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM33]
gi|398149211|gb|EJM37865.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM33]
Length = 374
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G AIKD D+ GH T G+ +A AAT A V A+L G +GKT + E+A+
Sbjct: 13 NGKRVAIKDSIDIAGHPTRSGSRAFADA-PAATKNAEVVDAILDAGWQIVGKTNLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CGI
Sbjct: 72 GVTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G +P++ VS G P+ S D VG FA
Sbjct: 132 GLKPTYGRVSRIGAHPLESSLDCVGPFA 159
>gi|288960643|ref|YP_003450983.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
gi|288912951|dbj|BAI74439.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
Length = 469
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+K++FD+ G T G+ R AT+ A + + + GA +G M E
Sbjct: 72 PLAGVPVAVKNLFDIGGLPTRAGS-RINRDRPPATADAVLLRRLTAAGAVLVGGLNMGEY 130
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP P R+ GGSSSG A A L SLG+DT GS+RVP+S+CG
Sbjct: 131 AYDFTGENAHDGACRNPHDPSRMAGGSSSGCGAATAAGLAPLSLGSDTNGSIRVPSSFCG 190
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
IFG +P++ ++ G P S D +G FA
Sbjct: 191 IFGLKPTYGRLTRHGSFPFCDSLDHLGPFA 220
>gi|414341820|ref|YP_006983341.1| amidase [Gluconobacter oxydans H24]
gi|411027155|gb|AFW00410.1| amidase [Gluconobacter oxydans H24]
Length = 444
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 171/388 (44%), Gaps = 41/388 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ F IKD+FDV G VT G+ A AT A V ++ GA + T MDE A
Sbjct: 71 LAGVPFGIKDLFDVAGQVTTAGSKVLA-NDPPATRDAALVARLIDAGAIPVALTNMDEFA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y +N H+G NP APD + GGSS GSA V A+L LG+DT GS+RVPAS CGI
Sbjct: 130 YGFATDNAHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPASLCGI 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G R + + G P S DTVG F AD +R F
Sbjct: 190 WGLRATQGRLPVEGSYPFVASLDTVGPF-----------------ADSAGGLR---ACF- 228
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
E +Q + P D G +K V +L GG EN + + D V +L L Q
Sbjct: 229 EALVQAENAPVD---VGALK-VARL-GGWFAEN--MSAPMSDAVSALGTRL---GATQTV 278
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+P +A ++ ++ E H + T + P + +R+ A I +
Sbjct: 279 ELPEVARARASAFVISASEGAALHLHRLRTQAQNYDPAVRDRLLAGALLPASLIFQAHRL 338
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV------FRARAFSLLSIAGVS 381
+ RA + D IL+ P V G P+ D +EV RA ++
Sbjct: 339 RNWFRARMHEAFADADILLAPAVVGEAPRF--DQPLIEVGGKMVSARANLGLYTQPLTLA 396
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSD 409
GF +++P+ LP+ L+A+ G +
Sbjct: 397 GFPVLTVPMKTA-GLPLGAQLIARPGRE 423
>gi|338971598|ref|ZP_08626983.1| amidase [Bradyrhizobiaceae bacterium SG-6C]
gi|338235158|gb|EGP10263.1| amidase [Bradyrhizobiaceae bacterium SG-6C]
Length = 383
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 151/333 (45%), Gaps = 40/333 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWA-RTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
PLS L A+KD +V+G G+ +A RT TA AV + GA +G T D
Sbjct: 13 PLSDLRVAVKDNIEVEGLAFTAGHRLYAMRT---GQRTASAVRKLEDAGAFVVGTTFTDS 69
Query: 86 MAYSINGENKHYGTP--TNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
+ + TP NP GGSS GSAVAV + +GTDT GS+R+PA+
Sbjct: 70 GGFGVT-------TPAVVNPIDAAVTAGGSSGGSAVAVARGFAELGIGTDTAGSIRIPAA 122
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
CG++GF+PS+ V GV P++ SFD VG A K L+ + R +++ D
Sbjct: 123 CCGLYGFKPSYGLVPLDGVWPLSTSFDHVGLLA---KTLDELDRASMEMMD--------- 170
Query: 204 VIFAEDCLQLSSIPSD-RVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
+QLSS+P D RV G V+ F +I + +++ G+
Sbjct: 171 -----ASMQLSSLPKDARVMIG-VECESPAFRDPVI--------CQRLNEAIERLAETGH 216
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+P A ++ E +G+ + LGP + + SA+ I
Sbjct: 217 SIVPVDLPDRETCMRAHGVITLLEAARTYGELLPAEMGMLGPAAIRALRSSESISAEDIR 276
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPP 355
++ T++RA ++ L +L++PT+ G PP
Sbjct: 277 AAKAHLTKIRAHMNELFEAVDMLLVPTLAGRPP 309
>gi|113477617|ref|YP_723678.1| amidase [Trichodesmium erythraeum IMS101]
gi|110168665|gb|ABG53205.1| Amidase [Trichodesmium erythraeum IMS101]
Length = 462
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 178/397 (44%), Gaps = 20/397 (5%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K+++D+ G T G A + AT A AV + GA +G MDE A
Sbjct: 73 LAGIPFAVKNLYDIAGLTTLAGAKINAE-NPPATQDATAVTKLKKAGAILVGALNMDEYA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP R+ GGSS SA AV A LV +LG+DT GS+RVPAS CG+
Sbjct: 132 YGFVTENSHYGATPNPHDLSRISGGSSGASAAAVAAGLVPITLGSDTNGSIRVPASLCGV 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FGF+P++ +S AGV A S D VG FA + + V + LQ +D + V +
Sbjct: 192 FGFKPTYGRLSRAGVFLFASSLDNVGPFARSVRDIATVYDI-LQGSDTRDPVCTKRS--P 248
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
E CL ++ Q + + GH + G+ + +++ Q
Sbjct: 249 ESCLP-------QLKQDIKDLRIAIADGHFAQG---GE--PEVFTAVEQVAEVLGVTQRV 296
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
+IP +A ++ E N H D + D P +R A Q
Sbjct: 297 TIPEADRARAAAYIITAAEGANLHLDNLRIRPQDFDPATRDRFLAGALIPADWYIQAQRF 356
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKL---QMDPSALEVFRARAFSLLSIA-GVSGF 383
+ ++++ + D I++ PT P P L +M + EV L + G
Sbjct: 357 RRWYQSSVKEIFNDVDIILAPTTPCIAPLLGAEKMTINGEEVLVRPNLGLYTQPLSFIGL 416
Query: 384 CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
+S+P+ + LP+ + ++A ++ +L + L
Sbjct: 417 PVLSVPIRRINGLPLGVQIIAAPYNEALVLQVAAVLE 453
>gi|288961382|ref|YP_003451721.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
gi|288913690|dbj|BAI75177.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
Length = 437
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 183/407 (44%), Gaps = 39/407 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G ++K +FDV G T G+ R AA A AV + + GA +G+T M E
Sbjct: 60 PLDGRILSVKALFDVAGDTTAAGS-AILRGQPAAMRDARAVARLRAAGAVIVGRTHMTEF 118
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYG P NP RVPGGSSSG+ ++V + + +LG+DTGGS+R+PA+ G
Sbjct: 119 AFSAVGINPHYGNPGNPRDRSRVPGGSSSGAVISVVDGMAEIALGSDTGGSLRIPAALSG 178
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRVGRVLLQLADDVNLVRPSQ 203
GF+PS + G P++ + D +G A D +L+ + LAD+ P+
Sbjct: 179 AVGFKPSSGRLPAEGAFPLSPTLDVIGPIATTVADAALLDSI------LADE----PPAP 228
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
Q +P R+ G+ +V F + D++ + +++G+
Sbjct: 229 FAPLPVAGQSFLVPRGRLFDGIEPAVAAAFEAGL-----------DRLRAAGAHIADGSI 277
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ E +LA L + + E D + P R+ + A D
Sbjct: 278 DAELD--ALAELDR-IGVFTAIELAATLADLGVAALDGIDPKTRARIEAGGKAPAA--DY 332
Query: 324 CQSVKTELRAALSALLGD----HGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLSI 377
+ ++ RAAL L+ + H +L++PTVP P + ++ +A +
Sbjct: 333 VRMLRR--RAALIRLMDERLTRHPVLLLPTVPLTAPAIADVLEDAAFHRVNLALLRNTRV 390
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
A + +S+PL LPV + + + G D LL + L + L+
Sbjct: 391 ANLFDLPAISLPLP-SPGLPVGLMAMGRRGGDRSLLGIAAGLESALR 436
>gi|398932709|ref|ZP_10665708.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM48]
gi|398161711|gb|EJM49937.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM48]
Length = 451
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 180/400 (45%), Gaps = 44/400 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD D HVT +G+ +A + A V + GA +GKT+ E
Sbjct: 79 PLHGIPVAVKDNIDTFDHVTTYGSAHFAGFKP--SRDALCVQRLREAGAVIVGKTLTHEF 136
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY G+ G NP + GGSS+GSA AV + +V +LGTDTGGS+R+PA+ C
Sbjct: 137 AYGPTGDRSLQGAARNPWDARCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAALCA 196
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA---WDPKILNRV--GRVLLQLADDVNLVRP 201
+ GF+PS ++V GV P+A S D VG A D ++L V GRV A+ RP
Sbjct: 197 VVGFKPSFASVPLEGVFPLASSLDHVGPIANHVEDARLLFEVVAGRVCAPEANP----RP 252
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+V + +T G V+ + + + Q E
Sbjct: 253 LRVGW--------------ITTGSFGPVD-------------AELNRQAYQAAQQLFGEA 285
Query: 262 NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKI 321
++ P A + + +LQR E + H + + + ER+ + +
Sbjct: 286 LQDTAELEPLAAGMKDTLLVLQRAEAFDLHAERMQDAPHKFEQEVRERLELSGEVRGWQY 345
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPP-----KLQMDPSALEVFRARAFSLLS 376
Q+ + + A++ L + LV P+VP P ++++ ++V RA S S
Sbjct: 346 IRAQASQARFKVAMARLFESYDFLVSPSVPITAPAVDAREVRIGDQDIDV-RAALLSHTS 404
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
++G +S+P+GL +PV + ++ G D LL ++
Sbjct: 405 AWNLTGLPAISLPVGLVRGMPVGLQVIGAAGEDDRLLRVM 444
>gi|15806856|ref|NP_295579.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Deinococcus
radiodurans R1]
gi|39931640|sp|Q9RTA9.1|GATA_DEIRA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|6459633|gb|AAF11407.1|AE002025_6 glutamyl-tRNA(Gln) amidotransferase, subunit A [Deinococcus
radiodurans R1]
Length = 482
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
+ LPL+G+ +KD +V G T G+ A S T+TA L GA +GK
Sbjct: 61 AGETLPLAGVPIVVKDNINVTGTRTTCGSRMLANYVSPYTATAAQKLQ--GAGAVIVGKA 118
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE A + E+ G NP +RVPGGSS GSAVAV A + SLG+DTGGSVR P
Sbjct: 119 NMDEFAMGSSTESSASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQP 178
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
A+ CG++GF+P++ VS G++ A S D +G FA
Sbjct: 179 AALCGVYGFKPTYGRVSRYGLVAYASSLDQIGPFA 213
>gi|288960642|ref|YP_003450982.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
gi|288912950|dbj|BAI74438.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
Length = 608
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ FA+KD DV G T P++ T + + V +L GA +GK +D+
Sbjct: 80 LPLYGVPFAVKDNIDVAGLPTTAACPEYTYTATDTATA---VQRLLDAGAILVGKANLDQ 136
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG NP P VPGGSSSGSAVAV + LV F+LGTDT GS RVPA++
Sbjct: 137 FATGLVGVRSPYGVARNPIDPLCVPGGSSSGSAVAVASGLVGFALGTDTAGSGRVPAAFT 196
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
I G +P+ VSTAGV+P +S D V FA
Sbjct: 197 NIVGLKPTKGLVSTAGVVPACRSLDCVSVFA 227
>gi|91978265|ref|YP_570924.1| allophanate hydrolase [Rhodopseudomonas palustris BisB5]
gi|91684721|gb|ABE41023.1| Amidase [Rhodopseudomonas palustris BisB5]
Length = 599
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ A+KD DV G T P +A S ++ AV + + GA IGKT +D+
Sbjct: 62 LPLYGVPVAVKDNIDVAGLPTTAACPAFAYRPSKDST---AVARLRAAGAIVIGKTNLDQ 118
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG P N PD VPGGSSSGSAVAV A LV SLGTDT GS RVPA
Sbjct: 119 FATGLVGVRSPYGIPRNAMRPDLVPGGSSSGSAVAVAAGLVPLSLGTDTAGSGRVPAMLN 178
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
I G +PS +ST G++P ++ D + FA
Sbjct: 179 NIVGLKPSLGLISTTGLVPACRTLDCISVFA 209
>gi|167573883|ref|ZP_02366757.1| pyrazinamidase/nicotinamidase [Burkholderia oklahomensis C6786]
Length = 375
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 166/381 (43%), Gaps = 37/381 (9%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G T AIKD D+ GH T + A A A V VL G GK M E+A+
Sbjct: 14 GPTIAIKDTIDIAGHRTTGASRALADAPPA-ERHAEVVERVLDAGWRIAGKANMHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N + GTP NP P R+PGGSSSGSA VG VD +LGTDTGGS+R PA+ CG+ G
Sbjct: 73 MTGINDYTGTPVNPQDPARIPGGSSSGSASLVGLGRVDAALGTDTGGSIRGPAACCGVIG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ VS GV P+ + D VG FA D L V L D ++ P A
Sbjct: 133 LKPTFGRVSRRGVAPVDTTLDCVGPFARDVATLVAV-MAALAPGFDASVASPQ---LAAC 188
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
+ + SD + +VE+ G +
Sbjct: 189 RVAIVETDSDAAIR---AAVERAAG------------------------QADCAATPLRL 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
LAA A + E G +V + K LG I R+ A T+A ++D + V+
Sbjct: 222 DDLAAAFDAGLAVINAETSRAFGRFVGSGK--LGADIDARLRVAATTTADQLDTAERVRA 279
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIP 389
A + LG +LV+PT+P P L V SL+ +SG +S+P
Sbjct: 280 RFTAQVDRALGTADVLVLPTLPALPITLDEARGGASVIAMS--SLIRPFNLSGHPALSLP 337
Query: 390 LGLHDN-LPVAISLLAKHGSD 409
L L + L + ++ + G+D
Sbjct: 338 LPLAGSPLKAGLQIVGRKGAD 358
>gi|67925167|ref|ZP_00518538.1| Amidase [Crocosphaera watsonii WH 8501]
gi|67852993|gb|EAM48381.1| Amidase [Crocosphaera watsonii WH 8501]
Length = 455
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 176/407 (43%), Gaps = 34/407 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD++G +T G+ + +S AT A A+ + + GA +G MDE A
Sbjct: 71 LTGVPFAVKNLFDIEGIITLAGS-KINKENSPATEDATAIKKLKAAGAILVGALNMDEYA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP R+ GGSS GSA AV A LV FSLG+DT GS+RVPA+ CG+
Sbjct: 130 YGFVTENSHYGATPNPHDLSRISGGSSGGSAAAVAASLVPFSLGSDTNGSIRVPAALCGV 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNLVRPSQVI 205
FG +P++ +S AG + S D +G F + + + VL D V P Q+
Sbjct: 190 FGLKPTYGRLSRAGTFLFSNSLDHIGGFTRSVRDMAAIFDVLQGEDQDDPVCTSLPPQLC 249
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-----KVPSLQHFLSE 260
F D++ G+ G I + GDY ++ + +++
Sbjct: 250 F------------DKLNDGI--------DGLTI--AVAGDYFQEGAETAALEAVETIAKL 287
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
N ++ SIP +A ++ E N H + + + D P +R
Sbjct: 288 LNTKEIISIPEAHRARAAAYIITACEGSNFHLENLRSRPQDFDPATRDRFLAGAFIPNTW 347
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLS 376
Q + R + + +++ PT P L + + + R
Sbjct: 348 YIQAQRFRRWYRDQVKEIFQKVDVIIAPTTPCVATTLGQEKMMINGEEILIRPNLGRFTQ 407
Query: 377 IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G VS P+ + LP+ + L+A + +L + L L
Sbjct: 408 PLSFIGLPVVSFPILRANKLPLGVQLIAAPYQELKILQVAACLEEKL 454
>gi|198283059|ref|YP_002219380.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666192|ref|YP_002425270.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247580|gb|ACH83173.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518405|gb|ACK78991.1| amidohydrolase, AtzE family [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 465
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 152/339 (44%), Gaps = 32/339 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD+ G +T G+ R + A + A AV + + GA +G M E
Sbjct: 73 PLAGVPFAVKNLFDLQGEITLAGS-KINRKDALAVADATAVRRLTAAGAVLVGALNMGEY 131
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN HYG NP R+ GGSS GS AV A +V +LG+DT GS+RVP+S CG
Sbjct: 132 AYDFTGENIHYGPSRNPHDRLRMTGGSSGGSGAAVAAGMVPIALGSDTNGSIRVPSSLCG 191
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S AG P S D VG A R + LA
Sbjct: 192 IFGLKPTYGRLSRAGAFPFCPSLDHVGPLA----------RSVADLA------------L 229
Query: 207 AEDCLQ----LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG- 261
A D +Q + +DR T+ + S+ G I + G +++ + + L+
Sbjct: 230 AYDAMQGADAADPVCADRATEPVSGSLADGVAGLKIA-IAAGYFMQQATSAAEQALARVA 288
Query: 262 ---NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
N IP A +A L+ E N H D + D P + +R+ A
Sbjct: 289 AALNVTDLVEIPGTAQARAAAYLITNAESSNLHLDRLRHHAADYDPDVRDRMLAGTLLPA 348
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
Q + RA + + + +L+ P P P +
Sbjct: 349 SWNIQAQRFRRWYRAEVLKVFARYDLLLAPATPMSAPAI 387
>gi|445420878|ref|ZP_21435700.1| amidase [Acinetobacter sp. WC-743]
gi|444758445|gb|ELW82945.1| amidase [Acinetobacter sp. WC-743]
Length = 448
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A KD+FDV G VT G+ + H+ A A V+ + G ++GKT +
Sbjct: 61 PLSLFDGVPIAWKDLFDVQGTVTTAGSKNREH-HAVAQQDADGVMQLTRMGMVNLGKTNL 119
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
E AYS G N H+GTP N P +PGGSSSG+A +VG K+V S+GTDT GS+R+PAS
Sbjct: 120 TEFAYSGLGLNPHFGTPKNVVDPRCIPGGSSSGAATSVGQKIVPISMGTDTAGSIRIPAS 179
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
+ G+ G+R S S S GV P+A S D+VG
Sbjct: 180 FNGLVGYRSSSSRYSKKGVFPLAASLDSVG 209
>gi|167566878|ref|ZP_02359794.1| indole acetimide hydrolase [Burkholderia oklahomensis EO147]
Length = 467
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 93/165 (56%), Gaps = 21/165 (12%)
Query: 21 SSAHQLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSA--------ATSTAPAVLAVL 71
+S +LPL+G+ F IKD +F D TH+A AT A V +L
Sbjct: 68 ASGRKLPLAGVPFVIKDNLFTAD-----------MPTHAASPALLGFNATRNATTVQQLL 116
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLG 131
GA +GK M E+A+ I N H+G NP P R+ GGSS G+A AV A + F LG
Sbjct: 117 DAGAVPLGKANMHELAFGITSANGHFGAVRNPHDPARIAGGSSGGTASAVAAG-IPFGLG 175
Query: 132 TDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
TDTGGSVR+PA++CG+ G RP+ ST GV+ ++ + DTVG A
Sbjct: 176 TDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGTIA 220
>gi|353558702|sp|C4YRY0.1|GATA_CANAW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
mitochondrial; Short=Glu-AdT subunit A
gi|238882845|gb|EEQ46483.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 450
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 200/451 (44%), Gaps = 60/451 (13%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
+ + + V++P++S PLSG T+ +KD T + + S +T +
Sbjct: 21 WNSLISDLVVEPTNSTG--PLSGTTYIVKDNIATSHGYTTAASKILSNYESPFNATIIDL 78
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
L+ S G+ IGK+ +DE N ++ TNP +VPGGSS GSA +V K+
Sbjct: 79 LS--SNGSKLIGKSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCS 136
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
FS+GTDTGGSVR+PASYC +FGF+P++ +S GVIP AQ+ DTVG + I+ RV
Sbjct: 137 FSIGTDTGGSVRLPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYD 196
Query: 188 VLLQLADDVNLVRPSQV-----IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
VL + D P +V ++ L + +P + V + L V + +
Sbjct: 197 VLNKYDDKDPTCLPEEVRQKIPTTKKETLTI-GVPHEFVLKELSADVRESW--------- 246
Query: 243 LGDYVKDKVPSLQHFLSEGN-KEQEYSIPS---LAALSSAMRLLQ----RYEFKNNHG-- 292
+Y K+ L H + + K + ++PS LA +A L + RY + N
Sbjct: 247 --EYALSKICKLGHLVKPISIKTIKKALPSYYTLATAEAASNLSRYDSIRYGYNTNESVN 304
Query: 293 ---DWVTTVKPD-LGPGISERV----WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGI 344
+ + T + D G + R+ + S ++ EL A S++ + +
Sbjct: 305 SPIELIATNRSDGFGSEVQRRILLGNYTLSSDSGDHYLRATQIREELCAEFSSIFNNSHV 364
Query: 345 LVIPTVPGPPPKLQMDPSAL-------EVFRARAFSLLSI---------AGVSGFCQVSI 388
L+ L M P++ E A + L+ A ++G +S+
Sbjct: 365 LLQDEQSSDKVDLIMAPTSTSTAPTWDEFVSANEKNFLNSYVNDVLTVPASLAGIPAISV 424
Query: 389 PLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
P+ + I L+ + G D +L L + +
Sbjct: 425 PVN-----GIGIQLMGQFGDDDLVLQLADQI 450
>gi|380485130|emb|CCF39556.1| glutamyl-tRNA(Gln) amidotransferase [Colletotrichum higginsianum]
Length = 642
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 10/172 (5%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
+ PL+G+ +KDI+D+ G TG GN W + A+ TAPAV A++ GA +GK
Sbjct: 210 ERPLAGVRLGVKDIYDISGIKTGNGNRAWYNLYPPASQTAPAVQALIDAGAVVVGKVKTA 269
Query: 85 EMAYSINGENKH-----YGTPTNPCAPD-RVPGGSSSGSAVAVGA-KLVDFSLGTDTGGS 137
+ A NGE + Y +P NP + P SS+G+ +V + + +D +LG+DTGGS
Sbjct: 270 QFA---NGEFANADWIDYHSPFNPRGDGYQDPNFSSAGAGASVASYEWLDIALGSDTGGS 326
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+R PA G++G RPSH AVS +P+A FDT G A DP +L VL
Sbjct: 327 IRGPARVQGLYGLRPSHGAVSLNHTLPLAPEFDTAGLVARDPALLRNASAVL 378
>gi|374632201|ref|ZP_09704575.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Metallosphaera yellowstonensis MK1]
gi|373526031|gb|EHP70811.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Metallosphaera yellowstonensis MK1]
Length = 389
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 186/400 (46%), Gaps = 46/400 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PLSGLTF IKDI + G T G+ ++ + A V VL G T +GKT E
Sbjct: 25 PLSGLTFGIKDIIETAGIRTTAGSR--ILSNYVPKNDAWVVKRVLELGGTILGKTNTHEF 82
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G NP P+R+ GGSS GSAVAVG +VD +GTDTGGSVR+PAS CG
Sbjct: 83 AVGATNTSSIAGPARNPRDPERISGGSSGGSAVAVGLGIVDVGVGTDTGGSVRIPASLCG 142
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G++P+ + +GVIP + + DT+G+ D ++L RV +V V +V
Sbjct: 143 VIGYKPTTGILPKSGVIPFSWTLDTIGFLTRDFEVLWRV-------VVNVTPVETRKVFM 195
Query: 207 AEDCLQLSS----IPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
++ ++ + D V+ L VE+ FG D VK +P+L+ EG
Sbjct: 196 SKGGTKIRAGLFMFGEDEVSVKLRDRVEE-FG---------LDIVKVSLPNLEK---EGG 242
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
K + R + E + H DW+ + + P + E + + +A +D
Sbjct: 243 KVR--------------RTIAVSEGASYHMDWLNSRAQEYFPDVREVLSSGLSVTA--VD 286
Query: 323 VCQSVKTELRAALSALLG---DHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAG 379
S++ R L +G D +++ PT PK+ + FR + + +
Sbjct: 287 YINSLRKR-RLLLEEYVGVFKDVDVVLSPTTKMVAPKIHDVLGKEKEFRDKLVGITELFN 345
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ G +SIP + LPV + + DG +L++ + L
Sbjct: 346 LVGAPSISIPFLELEGLPVGLMVSGPPYRDGTVLDVAKYL 385
>gi|392978453|ref|YP_006477041.1| amidase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392324386|gb|AFM59339.1| amidase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 465
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 150/325 (46%), Gaps = 16/325 (4%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +A+K++FDV GH T G +++ SAA++ + AV + S G G MD
Sbjct: 70 PLAGVPYAVKNLFDVAGHTTLAGAELFSK-RSAASADSFAVRQLRSAGGLLSGMVNMDAY 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP R+ GGSS GSA AV A+LV FSLGTDT GS+RVPAS CG
Sbjct: 129 AYGFTTENSHYGATRNPHDLTRIAGGSSGGSAAAVAARLVHFSLGTDTNGSIRVPASLCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G +P+ +S +G P S D +G FA L V LQ D + P Q
Sbjct: 189 IYGLKPTFGRLSRSGSHPFVASLDHIGPFARRVCDLASVYDA-LQGRDTCD---PFQ--- 241
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
AE + + DR GL +V GG+ + D ++ V + L + ++E
Sbjct: 242 AESSREQTRPLLDRGLDGLRCAV---LGGYF--STWCNDDAREAVARVARAL---DVQEE 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
P SA ++ E N + + P ER+ + Q
Sbjct: 294 LQFPDAELARSAAFIISASEGGNQYLPSLRREPARFEPHSRERLLAGAMIPSAWYIQAQR 353
Query: 327 VKTELRAALSALLGDHGILVIPTVP 351
+ R A AL +L+ P P
Sbjct: 354 FRAHARQACKALFEQADVLIAPATP 378
>gi|336121521|ref|YP_004576296.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanothermococcus
okinawensis IH1]
gi|334856042|gb|AEH06518.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Methanothermococcus
okinawensis IH1]
Length = 431
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 190/408 (46%), Gaps = 33/408 (8%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + PL G AIK +V+G+ + S+ +T V + S G
Sbjct: 36 LEKNEKLKNKPLYGKLIAIKSNINVNGYTISCASKTLENYVSSYDATV--VKKIKSQGGL 93
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG T MDE A +GE +YG NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 94 VIGMTNMDEFACGSSGETSYYGATKNPNAEDRIPGGSSSGSAAAVAADLCDMALGSDTGG 153
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRVGRVLLQLA 193
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G A D +L V + L ++
Sbjct: 154 SIRNPASHCGVVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDAFVLTNVIKG-LDIS 212
Query: 194 DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKD--- 249
D + P + +I + ++ G+VK + I + G + KD
Sbjct: 213 DSTTVDTPK--------FEKKNIENYKI--GIVKEFMDVSDEKIRNKIEEGIEVFKDLGC 262
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQR---YEFKNNHGDWVTTVKPDLGPGI 306
K+ L + ++ Y I + S+ + R Y + G+ V + +G I
Sbjct: 263 KIVELNYNYTDLALPTYYLINYVEFFSATRKYDGRRYGYPIEEVCGEEVLR-RILIGKHI 321
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV 366
SE+ + S + + ++ + L + ++ PTVP P K+ + + +E+
Sbjct: 322 SEKEF-----SGKYYKKALQARRLMKMEMLKLFKEVDVIASPTVPKLPHKIGEELTPMEM 376
Query: 367 FRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
+ A+ +L++ + G C + G + +PV + + K D +L
Sbjct: 377 Y---AYDVLTVPTNICGMCAGVVKCGDINGIPVGLQIQGKPFDDEKVL 421
>gi|171682542|ref|XP_001906214.1| hypothetical protein [Podospora anserina S mat+]
gi|170941230|emb|CAP66880.1| unnamed protein product [Podospora anserina S mat+]
Length = 601
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 80/132 (60%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD +D++G+ T G+P+ S +T+ V + + GA +GK M E
Sbjct: 183 PLDGVPTAVKDEYDMEGYSTTLGSPNVYADSSTNKTTSWCVQQIEAAGALILGKLSMHEF 242
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
G N HYGTP NP + GGSSSG+A AV A L+ LG+D GGS+R+P+S CG
Sbjct: 243 GLDTTGNNPHYGTPRNPHNSNYYTGGSSSGTAYAVAAGLIPIGLGSDGGGSIRIPSSLCG 302
Query: 147 IFGFRPSHSAVS 158
I+G +P+H +S
Sbjct: 303 IYGLKPTHGRLS 314
>gi|383792009|ref|YP_005476583.1| amidase [Spirochaeta africana DSM 8902]
gi|383108543|gb|AFG38876.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Spirochaeta africana DSM 8902]
Length = 493
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 191/417 (45%), Gaps = 42/417 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL F +KD V G G+ A S + TA V +LS GA +GKT MDE
Sbjct: 77 LAGLPFGVKDNIAVQGQPLSCGSRMLAGLQSPYSGTA--VERLLSAGAVVVGKTNMDEFG 134
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN G NP RV GGSS GSA AV A LV F+LG+DTGGSVR PA +CG+
Sbjct: 135 MGSATENSALGETVNPWDSQRVAGGSSGGSAAAVAAGLVPFALGSDTGGSVRQPAGFCGV 194
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
+G +P++ AVS G++ A S + +G F D +++ V V+ + + A
Sbjct: 195 YGLKPTYGAVSRYGLVAYASSLEVIGVFTRDLELMRTVFSVIRGSDGRDQTTIDWEAVAA 254
Query: 208 E---DCLQLSSIPSDRVTQGLVKSVEKLFG---------GHIIENVILGD-------YVK 248
E +L+ I D GL V + +G G+ I+ + L Y
Sbjct: 255 ELKPAPRRLAFIAGD---AGLQPDVARTYGQMRERARDCGYEIQEIDLATLAYAVPAYYT 311
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
L+ N + P A S + L+++ GD V ++ LG +
Sbjct: 312 IATAEASANLARYNGVRYGHRPVFA--ESPVELMRKSR-TEGFGDEV-KLRIMLGTYVLR 367
Query: 309 RVWE-AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSAL 364
++ AQ+I +T+L L++L LV+P P PP K +++D A
Sbjct: 368 SGFQDQFYVRAQRI------RTKLYQELASLFSGAQGLVLPVFPSPPFKRGGVELD--AF 419
Query: 365 EVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ + F+ L A +SG + P G D LP+ + ++ HGSD LL+++ L +
Sbjct: 420 QQKQGDRFTTL--ANLSGCPACAFPAGTVDGLPIGMQIMGPHGSDERLLDIIAELRD 474
>gi|148553669|ref|YP_001261251.1| amidase [Sphingomonas wittichii RW1]
gi|148498859|gb|ABQ67113.1| Amidase [Sphingomonas wittichii RW1]
Length = 382
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 11 FMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAV 70
F+E+F +L +G T A+KD D+ G T G+ + AA A V A+
Sbjct: 19 FVERF---------ELGGAGPTVAVKDCIDIAGKRTSVGSEALSEAPPAAAHAA-VVAAL 68
Query: 71 LSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSL 130
++GGA +GKT M E AY + G N+ GTP NP P +PGGSSSGSA AV A LV+ ++
Sbjct: 69 IAGGARIVGKTNMHEFAYGVTGVNRWLGTPVNPNYPGLIPGGSSSGSAAAVAAGLVEIAI 128
Query: 131 GTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL 190
GTDTGGS+R+PA+ CG+FG +PS VS G IP S D VG FA D +
Sbjct: 129 GTDTGGSIRMPATCCGVFGLKPSFGRVSREGCIPADSSLDCVGPFARD----------VA 178
Query: 191 QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
+ + L+ P+ V P+ R + VE I E V
Sbjct: 179 GIETAMALIDPTFV------------PAGRPASVRIGWVESSADAEIAEAV--------- 217
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
L G +P L A + E + GD V P +G + R+
Sbjct: 218 ---LAELRRSGADVVPVDLPGLGQAFEAGITIMAAEAWSTFGDLVE--DPRIGADVRARL 272
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRAR 370
A + SA ++ + V+T AA+ L L +P +P PP L A + R
Sbjct: 273 LGASKVSAAQLAEAEKVRTRFVAAVDQALAGVDALALPALPALPPALDDLGDAARMLRLT 332
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSD 409
SL+ VSG ++IPL P+AI L+ + D
Sbjct: 333 --SLIRPFNVSGHPALAIPLA---GRPIAIQLVGRRNDD 366
>gi|225025269|ref|ZP_03714461.1| hypothetical protein EIKCOROL_02166 [Eikenella corrodens ATCC
23834]
gi|224942027|gb|EEG23236.1| hypothetical protein EIKCOROL_02166 [Eikenella corrodens ATCC
23834]
Length = 482
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 183/425 (43%), Gaps = 67/425 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + G+ S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACGSKMLDNFVSPYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
E YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMASFD 231
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHII--ENVILGDYVK-DKVPSLQHFL----SE 260
E S +R + + + K G I G+ D +LQ+ + ++
Sbjct: 232 ER----DSTSLERSKEDYTRDLNKPLKGMKIGLPKEYFGEGADADVQAALQNVIDLLKAQ 287
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRY----------EFKNNHGDWVTTVKPD 301
G + E S+P A A + A L RY +F + + T
Sbjct: 288 GAETIEVSMPQTALSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYSNTRAEG 347
Query: 302 LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
G + R+ ++A AQK+ + V + + A + ++ PT
Sbjct: 348 FGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVANDFQTAFAQC----DFILAPTA 401
Query: 351 PGPPPKLQMD-PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGS 408
P PKL D ++++ + +++ ++G +++P G + LP+ + + H S
Sbjct: 402 PTAAPKLGSDIHDPVQMYLSDIYTI--AVNLAGLPALTLPAGFSSSGLPIGVQFIGNHFS 459
Query: 409 DGFLL 413
+ +L
Sbjct: 460 ETKIL 464
>gi|15920693|ref|NP_376362.1| enantiomer-selective amidase [Sulfolobus tokodaii str. 7]
gi|15621476|dbj|BAB65471.1| amidase [Sulfolobus tokodaii str. 7]
Length = 396
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 164/397 (41%), Gaps = 42/397 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L L F IKDI G T G+ + A V +L+ G IGKT E A
Sbjct: 29 LRDLKFGIKDIILTKGVRTTAGSKILK--DFIPSENAYIVDKILAEGGEIIGKTNTHEFA 86
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ G NP P+R+ GGSS GSAVAV LVD +GTDTGGSVR+PAS CG+
Sbjct: 87 IGATNTSSLIGPAKNPYDPERISGGSSGGSAVAVALGLVDVGIGTDTGGSVRIPASLCGV 146
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P++ + T GVIP + +FDT+G+ LA D++L+R + A
Sbjct: 147 IGFKPTYGIIPTDGVIPFSWTFDTIGF-----------------LAKDISLIRRTIEALA 189
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK-----VPSLQHFLSEGN 262
E+ + S R T GL + GDY K + L +
Sbjct: 190 ENKIPFISYSKRRPTLGLF---------------LFGDYETSKALEPVINKLSSYFDLVQ 234
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
E E I + + L + + H + K + + + E + A
Sbjct: 235 IENELLIKHSRIVRKTIALAEASSY---HMKYYDKYKDLYSSDVRKLIEEGFKILATDYV 291
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
++ L ++ L+ PT PK+Q +R + I G
Sbjct: 292 NSLRIRKVLLEEYFSIFKKIDALISPTTRIVAPKIQEVIGNELKYRDSLIANTEIFNTLG 351
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+SIP+ ++LPV + + + DG +L++ E +
Sbjct: 352 APSISIPVTKLNDLPVGLMISGEPYKDGTVLDIAEEI 388
>gi|365886411|ref|ZP_09425343.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3809]
gi|365338081|emb|CCD97874.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3809]
Length = 466
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 176/400 (44%), Gaps = 23/400 (5%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV G T G+ R + A+ A + + + GA +G M E
Sbjct: 65 PLAGVPFAVKNLFDVAGLPTRAGS-RINRDRTPASRDATLIERMEAAGAVLVGALNMGEY 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP P R+ GGSS GS AVG LV +LG+DT GS+RVP+S+CG
Sbjct: 124 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPVALGSDTNGSIRVPSSFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P S D +G FA R L D + P
Sbjct: 184 IFGLKPTYGRLSRARSFPFVMSLDHLGPFA-------RSVEDLALAYDAMQGPDPDDAA- 235
Query: 207 AEDCLQLSSIP-SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
C P S+ ++QGL + GGH +N+ + ++ + Q
Sbjct: 236 ---CTARGPEPVSNLLSQGLGDLRIAIAGGHFQKNLF-----PEAAEAVSQVATALKLTQ 287
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+P A +A ++ E + H D + D P + +R+ A +D Q
Sbjct: 288 VIDVPEAARARAAAYVISTTEGASLHLDRLRQRPQDFDPAVRDRLIAGAMIPAPMVDRAQ 347
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE--VFRARAFSLLSIAGVS-- 381
+ RA + L +L+ P P PKL L+ RA + +S
Sbjct: 348 KFRRWYRAQVLELFKSVDVLIAPATPCIAPKLGQATFVLDGVELPVRANIGIHTQPISFI 407
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
G V++P+ L + +P+ + ++A + L + L
Sbjct: 408 GLPVVAVPIPL-EPMPIGVQIIAAPWCEHVALRVAHALQQ 446
>gi|340516027|gb|EGR46278.1| predicted protein [Trichoderma reesei QM6a]
Length = 718
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ FA+KD DV G VT R AT+TAPA+ +L GA +GK +D++
Sbjct: 322 PLFGIPFAVKDNIDVKGVVT---TAACDRFAYTATATAPAIQHLLDAGAIYVGKLNLDQL 378
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + G YG P + + GGSSSG AVAV A LV F++GTDT GSVR+PA++ G
Sbjct: 379 ATGLTGCRSPYGIPHSYHSEKHASGGSSSGCAVAVAAGLVSFAIGTDTAGSVRIPAAFNG 438
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 191
I GF+P+ +S GV+P QS DT+G FA + +V V+ Q
Sbjct: 439 IVGFKPTKGTISARGVVPACQSLDTMGIFARSVEEARQVWYVMDQ 483
>gi|383774984|ref|YP_005454053.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium sp. S23321]
gi|381363111|dbj|BAL79941.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium sp. S23321]
Length = 464
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 179/403 (44%), Gaps = 29/403 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV G T G+ R + A A + + + GA +G M E
Sbjct: 71 PLAGVPFAVKNLFDVAGLPTRAGS-KINRDRAPAERDATLIERMEAAGAVLVGALNMGEY 129
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP R+ GGSS GS AVG LV +LG+DT GS+RVP+S+CG
Sbjct: 130 AYDFTGENIHDGPSRNPHDTTRMSGGSSGGSGSAVGGALVPIALGSDTNGSIRVPSSFCG 189
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P SFD +G FA R + LA + + Q
Sbjct: 190 IFGLKPTYGRLSRARSFPFVASFDHLGPFA----------RSVTDLALAYDAM---QGPD 236
Query: 207 AED--CLQLSSIPSDRVTQGLVKSVE-KLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
A+D C P+ + V + + GG+ +NV + V ++ N
Sbjct: 237 ADDAACTTRGLEPTTPLLANPVSDLRIAIAGGYFQKNVF-----PEAVEAVSRVAKALNA 291
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ +P A +A ++ E + H D + D P + +R+ A +D
Sbjct: 292 TRVVEVPEAARARAAAYVISTTEGASLHLDRLRKRPSDFDPAVRDRLIAGAMVPAPLVDR 351
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRARAFSLLSIA 378
Q + RA L+ L +L+ P P PKL +D L V I+
Sbjct: 352 AQKFRRWYRAQLAQLFRSVDVLIAPATPCTAPKLGQVNFNLDGVELPVRANIGIHTQPIS 411
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ G V++P+ L + LP+ + ++A + L + L
Sbjct: 412 FI-GLPVVAVPVPL-EPLPIGVQIIAAPWREDIALRVAYALEK 452
>gi|337280584|ref|YP_004620056.1| amidase [Ramlibacter tataouinensis TTB310]
gi|334731661|gb|AEG94037.1| amidase-like protein [Ramlibacter tataouinensis TTB310]
Length = 466
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+KD+ +++G + G+ W AT TA +++ G +GKT E
Sbjct: 76 PLHGIPIALKDLVELEGKMVTGGSEVWKTRR--ATRTATLAQKLIAQGMIVLGKTHTVEF 133
Query: 87 AYSINGENKHYGTPTNP--CAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A G N GTP NP A R PGGSSSGSAVAV A L +++GTDTGGSVR+PAS+
Sbjct: 134 AMGGWGTNSLRGTPWNPWDMARARTPGGSSSGSAVAVAAGLAPWAVGTDTGGSVRMPASW 193
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
CGI G + + VST GV+P++ + DT G
Sbjct: 194 CGITGLKTTIGRVSTHGVLPLSPTLDTPG 222
>gi|307725600|ref|YP_003908813.1| Amidase [Burkholderia sp. CCGE1003]
gi|307586125|gb|ADN59522.1| Amidase [Burkholderia sp. CCGE1003]
Length = 470
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 187/424 (44%), Gaps = 67/424 (15%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A KD+FDV G VT G+ + R + AT AP V A G IGKT + E A
Sbjct: 83 LDGVPIAWKDLFDVAGSVTTAGSALY-RERAPATGDAPLVAAAARAGLVCIGKTNLSEFA 141
Query: 88 YSINGENKHYGTPTNPC-------APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
YS G N H+GTP NP RVPGGSSSG+AVAV +V ++GTDT GS+RV
Sbjct: 142 YSGLGLNPHFGTPFNPAFDASVADGGHRVPGGSSSGAAVAVATGVVPIAVGTDTAGSIRV 201
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRV--GRVLLQLADD 195
PA++ G+ G+R S + + G+I ++QS DT G A D + V GR L + DD
Sbjct: 202 PAAFNGLVGYRASRARYAQQGMIGLSQSADTCGPLARSVADCAAFDAVVGGRDLHRALDD 261
Query: 196 VNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLF-GGHIIENVILG--DYVKDKVP 252
+ Q QL ++ V ++ V +L G ++ V +G D D +
Sbjct: 262 LR----GQRFVVPTGWQLRFAVTEAVGADFMRFVARLSDAGARVDEVKVGAFDAACDLIA 317
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
+ F S + +RY + D I +RV
Sbjct: 318 TRGWFGS-------------------LEAFERYR---------RVLDSDAAACIDQRVRT 349
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHG------ILVIPTVPGPPPK---LQMDPSA 363
+ S DV S EL A + L+G G L++PTVP P+ L+ DP
Sbjct: 350 RLEMSR---DVPASRLAELLEARARLIGQFGAELGDATLLLPTVPHVAPECAPLEADP-- 404
Query: 364 LEVFRARAFSLLSIAGVSGFCQV---SIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETL 419
E F + LS+ F ++P G LP ++ L+ D L+ L T+
Sbjct: 405 -ERFARVNLATLSMTMPGSFLDTPAFAMPAGADAAGLPTSVQLMRAQNDDDALIALALTV 463
Query: 420 HNTL 423
T+
Sbjct: 464 ERTV 467
>gi|218439121|ref|YP_002377450.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424]
gi|218171849|gb|ACK70582.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424]
Length = 457
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 175/411 (42%), Gaps = 40/411 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD+ G VT G+ + +S A A A+ + GA +G MDE
Sbjct: 70 PLAGVPFAVKNLFDIAGVVTLAGS-KINQDNSPAIREATALSRLKKAGAILVGALNMDEY 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP R+ GGSS GSA AV LV FSLG+DT GS+RVPA++CG
Sbjct: 129 AYGFVTENSHYGATPNPLDITRISGGSSGGSAAAVAGDLVTFSLGSDTNGSIRVPAAFCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++GF+P++ +S AG + S D +G FA VR IF
Sbjct: 189 LYGFKPTYGRLSRAGTFLFSSSLDHIGPFARS--------------------VRDIATIF 228
Query: 207 AEDCLQLSSIPSDRVTQGLV--KSVEKLFGGHIIENV---ILGDYVK-----DKVPSLQH 256
D LQ P D V + +L G IE V I DY + + +++
Sbjct: 229 --DLLQ-GEDPRDPVCTKRPPHPCLPELDAG--IEGVRIAIADDYFSEGAEPEALKAVEA 283
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRT 316
+Q +IP +A ++ E N H + T D P +R
Sbjct: 284 IAELLGVKQRITIPQADRARAAAYIITASEGSNLHLANLKTRLQDFDPATRDRFLAGALI 343
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAF 372
A Q + R L + I++ PT P P + + + V R
Sbjct: 344 PADWYIQAQRFRRWYRDRLREVFQQVDIILAPTTPCVAPAIGQEKITIAGEEIVIRPNLG 403
Query: 373 SLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S P+ +LP+ + L+A + +L + + L + L
Sbjct: 404 RFTQPLSFVGLPVLSFPIKQPKSLPLGVQLIAAPYQEATILKVAKFLEDQL 454
>gi|452953149|gb|EME58572.1| amidase [Amycolatopsis decaplanina DSM 44594]
Length = 429
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 185/429 (43%), Gaps = 73/429 (17%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWA----RTHSAATSTAPAVLAVLSGGATSIGKTIM 83
L+G+ +KD V G G P A R H++ V ++ GA IGK M
Sbjct: 39 LAGVPLVVKDNIHVAGMPNTAGTPALANHVPREHASV------VRRLIDAGAIVIGKASM 92
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
E+A+ I + G N P R GGSS G+AVAV A +V LGTDTGGSVR+PA+
Sbjct: 93 HELAFGITCDTTPLGPVRNARDPSRFAGGSSGGTAVAVAAGIVPAGLGTDTGGSVRIPAA 152
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA--DDVNLVRP 201
G+ GFRP+ + G+ P++ + DT G A R + LA D V
Sbjct: 153 LNGVCGFRPTTGRYPSDGMTPLSGTRDTAGPIA----------RTVTDLALLDAVLAGEE 202
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI------------IENVILGDYVKD 249
+ + ++L +P +T L VE+L+ + I++ L ++V D
Sbjct: 203 PRPLIGISPIRL-GVPHGFLTGDLAGEVEELWEAALTRLRAAGVTLVPIDDTPLAEHVAD 261
Query: 250 K-VPSLQHFLSEGNKE--QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ +P + H G + EY +P + S RL++ + + +V P +GPG+
Sbjct: 262 QGMPLVIHEAGTGLRSYLAEY-VP----MVSFERLVREVAAADVRAIFAESVVPGVGPGV 316
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGI--LVIPTVPGPPPKLQMDPSAL 364
E + +T LR A S + + GI L PT P D SA+
Sbjct: 317 YE--------------AALATRTALRHAYSKIFDESGIDALAFPTT----PATAQDFSAV 358
Query: 365 EVF--RARAFSLLSI-------AGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLN 414
E F R RA V+GF +++P+G LP ++L G D LL
Sbjct: 359 EKFVHRGRAVPTFPTFIRNCQPGSVAGFPGLTVPMGRARGGLPAGLALDGASGEDRKLLA 418
Query: 415 LVETLHNTL 423
+ ++ L
Sbjct: 419 VGASVERVL 427
>gi|403050049|ref|ZP_10904533.1| hypothetical protein AberL1_00550 [Acinetobacter bereziniae LMG
1003]
Length = 448
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Query: 27 PLS---GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
PLS G+ A KD+FDV G VT G+ H+ A A V+ + G ++GKT +
Sbjct: 61 PLSLFDGVPIAWKDLFDVQGTVTTAGSKTRVH-HAVAQQDADGVMQLTRMGMVNLGKTNL 119
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
E AYS G N H+GTP N P +PGGSSSG+A +VG K+V S+GTDT GS+R+PAS
Sbjct: 120 TEFAYSGLGLNPHFGTPKNVVDPRCIPGGSSSGAATSVGQKIVPISMGTDTAGSIRIPAS 179
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
+ G+ G+R S S S GV P+A S D+VG
Sbjct: 180 FNGLVGYRSSSSRYSKKGVFPLAASLDSVG 209
>gi|325003669|ref|ZP_08124781.1| Amidase [Pseudonocardia sp. P1]
Length = 485
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 185/427 (43%), Gaps = 36/427 (8%)
Query: 3 SRDSDYGAFMEKFVLQPSSSAHQL-PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
S DSD + + S+ H++ PL G+ A+KD V T G+ A A
Sbjct: 56 SVDSDDALAVARASETMISAGHRIGPLHGVPVALKDNVSVRDKPTTAGSAILADHRPAED 115
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
+T L S GA +GKT M E A+ N HYG TNP R+PGGSS GS VAV
Sbjct: 116 ATVTRRLR--SAGAIIVGKTNMHEFAWGGTSANPHYGFVTNPWDTGRMPGGSSGGSGVAV 173
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
+ +LGTDTGGS+R+PA+ GI G RP+ VS AGVIP+A S DTVG A
Sbjct: 174 ATRACFGALGTDTGGSIRLPAALNGITGLRPTIGRVSNAGVIPLAWSMDTVGPMA----- 228
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGG---HII 238
+ A D ++ + D S +DR + + + G II
Sbjct: 229 ---------RTAADCAVM--FTALAGHDPADAGS--ADRAGEDYSRDLGAGLDGLRVGII 275
Query: 239 ENVILGDYVKDKV-----PSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGD 293
E L +V+ V +L ++ G + E SI + SA ++ E H
Sbjct: 276 EGYSL-HHVQPAVDKALRAALDVLVAGGARTSEVSIADIEGNISAQLTVEACEPSTYHQR 334
Query: 294 WVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGP 353
W+ D G + + A + Q +T LR+ A L +LV PT+P
Sbjct: 335 WLRERPDDYGDDVRLLLEAGEMLPATQYLQAQRYRTLLRSQTLAALSRVDLLVCPTLPFT 394
Query: 354 PPKL-----QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHG 407
L ++DP E + + ++G +S+P G D LP+ + L+ +
Sbjct: 395 ATPLGEVTVEIDPGRAEDMLSAIMQFTGLPSLTGLPAISVPCGFDDAGLPIGMQLIGRPF 454
Query: 408 SDGFLLN 414
++ LL
Sbjct: 455 AESTLLR 461
>gi|269127198|ref|YP_003300568.1| amidase [Thermomonospora curvata DSM 43183]
gi|268312156|gb|ACY98530.1| Amidase [Thermomonospora curvata DSM 43183]
Length = 445
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ A+K++ DV G G+G+ +A AT+ A AV + + GA +G T E
Sbjct: 73 PLFGVPVAVKELIDVAGAEIGYGSRAFA--GRIATADAEAVRRLRAAGAIVVGVTRSPEF 130
Query: 87 AYSINGENKHYGTP-TNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S++G + P NP P R PGGSSSGSAVAV V +LGTDT GS+R+PA+ C
Sbjct: 131 GWSLSGRDAASPAPVANPWDPARDPGGSSSGSAVAVATGTVCLALGTDTAGSIRMPAALC 190
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
G++GF+P+ AVS GV +++SFD VG A P+ L
Sbjct: 191 GVWGFKPTRGAVSDRGVRLLSRSFDHVGPLAGTPRDLQ 228
>gi|163842852|ref|YP_001627256.1| amidase [Brucella suis ATCC 23445]
gi|163673575|gb|ABY37686.1| Indoleacetamide hydrolase [Brucella suis ATCC 23445]
Length = 445
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL G +IKD+FDV G T G+ H A + A++ + + GA IGKT M
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+P +
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPVAL 168
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GF+P+ + G P+A S D+VG
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG 197
>gi|160936243|ref|ZP_02083616.1| hypothetical protein CLOBOL_01139 [Clostridium bolteae ATCC
BAA-613]
gi|158441053|gb|EDP18777.1| hypothetical protein CLOBOL_01139 [Clostridium bolteae ATCC
BAA-613]
Length = 506
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 186/419 (44%), Gaps = 73/419 (17%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ AIKD G T + + T TA AV + GA +GKT MDE
Sbjct: 70 PLAGVPVAIKDNMCTKGMRTTCSSRILG--NFIPTYTAQAVSNLEQAGAVILGKTNMDEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E +G NP + VPGGSS GS AV A ++LG+DTGGS+R P+S+CG
Sbjct: 128 AMGSTTETSAFGVTRNPWNLEHVPGGSSGGSCAAVAAGECFYALGSDTGGSIRQPSSFCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G +P++ VS G+I S D +G A D ++ VL LA + + S +
Sbjct: 188 VTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKD---VSDCAAVLEVLAS--HDPKDSTSME 242
Query: 207 AEDCLQLSSIPSDRVTQGLVKSV-EKLFGGHIIENVILGDYVKDKVPSLQHFLSEGN--- 262
DC S++ D +G+ + E FG + + VKD V L E
Sbjct: 243 RRDCDFTSALSED--VRGMRIGIPESYFGQGLDQE------VKDAVLEAARVLGEKGAIV 294
Query: 263 -----KEQEYSIPSLAALSS--AMRLLQRY----------EFKNNHGDWVTTVKPDLGPG 305
K EY+IP+ ++S A L R+ E++ H + + GP
Sbjct: 295 ETFDLKLAEYAIPAYYVIASAEASSNLSRFDGVKYGYRAPEYEGLHSMYKKSRSLGFGPE 354
Query: 306 ISERVW----------------EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
+ R+ +A+RT A +K E A ++ + +++ P
Sbjct: 355 VKRRIMLGSFVLSSGYYDAYYLKALRTKAL-------IKKEFDRAFAS----YDVILAPA 403
Query: 350 VPGPPPKLQM---DPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDN-LPVAISLL 403
P P+L DP L+++ +++ +++AG+ G +S+P GL LP+ + L+
Sbjct: 404 APSTAPRLGQSLGDP--LKMYLGDIYTISVNLAGLPG---ISLPCGLDSKGLPIGLQLI 457
>gi|75676462|ref|YP_318883.1| amidase [Nitrobacter winogradskyi Nb-255]
gi|74421332|gb|ABA05531.1| amidase [Nitrobacter winogradskyi Nb-255]
Length = 449
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P +G+ +IKD+FDV G V+ G+ AA AP V + G IG+T M E
Sbjct: 70 PYAGIPVSIKDLFDVRGQVSRAGSLALKDAPPAAKD-APVVARLRRAGFVVIGRTNMTEF 128
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AYS G N HYGTP N D VPGGSSSG+AV++ + +LGTDTGGS R+PA+Y
Sbjct: 129 AYSGLGINPHYGTPKNGWRRDVGHVPGGSSSGAAVSITDGMAHGALGTDTGGSCRIPAAY 188
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
CGI G++P+ + G +P++ + D+ G A
Sbjct: 189 CGIVGYKPTARRIPLDGGVPLSVTLDSYGPIA 220
>gi|288818754|ref|YP_003433102.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Hydrogenobacter
thermophilus TK-6]
gi|384129504|ref|YP_005512117.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Hydrogenobacter
thermophilus TK-6]
gi|288788154|dbj|BAI69901.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Hydrogenobacter
thermophilus TK-6]
gi|308752341|gb|ADO45824.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Hydrogenobacter
thermophilus TK-6]
Length = 480
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 188/437 (43%), Gaps = 68/437 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ AIKD +V G T G+ S +T L GA +GKT MDE
Sbjct: 65 PLFGIPVAIKDNINVRGLPTTCGSKMLENYVSPYDATVIERLK--RAGALIVGKTNMDEF 122
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + E + NP +RVPGGSS GSA V SLG+DTGGS+R PAS+CG
Sbjct: 123 AMGSSTEYSAFFPTRNPWDLERVPGGSSGGSAACVAVLSAPVSLGSDTGGSIRQPASFCG 182
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G +P++ VS G++ A S D +G F + +DV L+ +VI
Sbjct: 183 VIGLKPTYGRVSRYGLVAFASSLDQIGPFG--------------RRTEDVALLM--EVIS 226
Query: 207 AEDCLQ--LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
ED +S+P + T+ + K ++ L G + + D ++ + S FL E + +
Sbjct: 227 GEDPKDSTCASLPVPKYTEEIRKDIKGLKVG-VPKEFFEFDVQREVLESFNAFLKELDAQ 285
Query: 265 Q-----------EYSIPS--LAALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
+Y+IP+ + A S A L RY+ + + + T
Sbjct: 286 GCVIEEVSLPHIKYAIPAYYVIAPSEASSNLARYDGVRYGYRAKAYSDLFEMYAKTRDEG 345
Query: 302 LGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
G + R+ ++A A K+ +K + A + +L PT
Sbjct: 346 FGQEVKRRIMIGTFALSSGYYDAYYLKAMKVRAL--IKRDFEKAFKKV----DMLACPTT 399
Query: 351 PGPPPKL---QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHG 407
P KL DP ++++ + F++ ++G +S+P+G LPV L+ K
Sbjct: 400 PTVAFKLGEKTQDP--IQMYLSDIFTV--SVNLAGLPAISLPIGFALGLPVGGQLIGKPF 455
Query: 408 SDGFLLNLVETLHNTLK 424
+G LL + +T K
Sbjct: 456 DEGTLLKVSYLWEHTYK 472
>gi|367476638|ref|ZP_09476014.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 285]
gi|365271051|emb|CCD88482.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 285]
Length = 450
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 188/412 (45%), Gaps = 35/412 (8%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
++A P +G+ +IKD+FD+ G VT G+ + A AV + G IG+
Sbjct: 65 ANAAPSPYAGIPVSIKDLFDIKGQVTRAGSRALEDSAPADADAP-AVARLRKAGFVVIGR 123
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
T M E AYS G N HYGTP + D VPGGSSSG+AV+V ++ +LGTDTGGS
Sbjct: 124 TNMTEFAYSGIGINPHYGTPKSAWKRDIGYVPGGSSSGAAVSVVDRMAYGALGTDTGGSC 183
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R+PA++ GI G++P+ S V G +P++ + D+ G A N VG + D V
Sbjct: 184 RIPAAFNGIVGYKPTQSRVPLDGGVPLSTTLDSFGPLA------NTVG--CCAVLDSVLA 235
Query: 199 VRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
P + + A L ++P+ V L + + F + D + + Q
Sbjct: 236 DEPIRPLVARPVKGLRLAVPTTVVLDELDAVITETF-----------ERALDTL-ARQGA 283
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERV--WEAV 314
L E + E+ + + + Y + ++ T K D+ P +S R+ EA+
Sbjct: 284 LIERIEFPEFLDVGIIGMKGGFAAAESYAWHR----FLLTAKGDVYDPRVSVRIARGEAI 339
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA--RAF 372
T I++ + ++ ++ A +A + + LV+PT PP + R RA
Sbjct: 340 -TVPDYIEMLNARRSLVKRA-AARIAPYDALVMPTTANAPPAIADLADDAAFARENIRAL 397
Query: 373 SLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ + C +S+P H +PV + L G D LL + + ++
Sbjct: 398 RNCTFINMIDGCAISLPAHRHGEVPVGLMLAQSGGHDRKLLEIAAGVEGVVR 449
>gi|284997770|ref|YP_003419537.1| amidase [Sulfolobus islandicus L.D.8.5]
gi|284445665|gb|ADB87167.1| Amidase [Sulfolobus islandicus L.D.8.5]
Length = 397
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 182/426 (42%), Gaps = 45/426 (10%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+S Y AF+ ++ + L +TF IKD+ G T G+ + A
Sbjct: 7 NSKYNAFITLHNIEENDKGK---LKDVTFGIKDVILTKGIRTTAGS--RILENYVPQKNA 61
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V A+L G IGKT E A + G NP P+R+ GGSS GSAVAV
Sbjct: 62 YVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVNPERISGGSSGGSAVAVKLD 121
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP-KILN 183
++D +GTDTGGSVR+P+S CG+ GF+P+ + T GVIP + S DTVG D +L
Sbjct: 122 MIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLR 181
Query: 184 RVGRVLL-QLADDVNL----VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII 238
RV +L V + RP +F D +++S I L+K + +
Sbjct: 182 RVFDAILPNEKKKVEIAKLRTRPRLGLFLFDEMEVSRI--------LLKEIYAKLSSYF- 232
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
D V+ +P L+ + S+ + SLA SS H DW+T
Sbjct: 233 ------DIVEVDLPLLRQYGSKTRRTI-----SLAEASSY------------HKDWITEN 269
Query: 299 KPDLGPGISERVWEAVRTSAQK-IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ + ++ SA ID + + + + L + ++ PT PK+
Sbjct: 270 SNKYFKDTYTLLLDGMKISATDYIDAIRYRRVLIEEYIK-LFKNIDFILSPTTKIVAPKI 328
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
S FR + + V G +SIP + LPV + + + DG LL + E
Sbjct: 329 SDVLSNPLQFREYLIANTELFNVVGAPSISIPFSTLNELPVGLMISGELYKDGDLLEVTE 388
Query: 418 TLHNTL 423
+ N +
Sbjct: 389 YILNVV 394
>gi|220923651|ref|YP_002498953.1| amidase [Methylobacterium nodulans ORS 2060]
gi|219948258|gb|ACL58650.1| Amidase [Methylobacterium nodulans ORS 2060]
Length = 427
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 169/410 (41%), Gaps = 47/410 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ +IKD+FDV G T G+ R A AP V + GA IGKT M E
Sbjct: 51 PLDGVIVSIKDLFDVAGEPTTAGSA-IRRKAVPAAQDAPVVARLRRAGAVIIGKTNMSEF 109
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N H+GTP N P R+PGGSSSG+ V+V D ++GTDTGGS+R+PA+ G
Sbjct: 110 AFSGLGLNPHWGTPGNAADPTRIPGGSSSGAGVSVALGTSDIAIGTDTGGSIRIPAALNG 169
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL----------LQLADDV 196
+ GF+P+ V AG P++ S D++G A + VL + L D+
Sbjct: 170 VVGFKPTARRVPLAGAFPLSPSLDSIGPLARSVQACADADTVLSGEEFGPLRPVAL-RDL 228
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVPSLQ 255
+ P ++F E T +V ++ E G E+V + D D + L
Sbjct: 229 RVGVPRGLLFTE-------------TDPMVAQAFEAALGRLGTESVRISDIALDDL--LA 273
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
S+ E H DW+ + P + R+
Sbjct: 274 RMAEATAAAPVASV----------------EAAEIHADWIDAEEAAFDPRVHARISRGRT 317
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIP--TVPGPPPKLQMDPSALEVFRARAFS 373
+A + EL A L +L +P +P P + A
Sbjct: 318 VTAGTYIRMMRARAELIRACDDRLAGIDLLALPATAIPAVPIAAMAEDEAFTRTNLLMLR 377
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ + VS+PL LPV + LLA+HG D LL + + L
Sbjct: 378 NTMVGNLFDLTGVSLPLP-GQALPVGLMLLARHGQDRRLLEIAAAVEARL 426
>gi|421850265|ref|ZP_16283229.1| amidase [Acetobacter pasteurianus NBRC 101655]
gi|371458925|dbj|GAB28432.1| amidase [Acetobacter pasteurianus NBRC 101655]
Length = 453
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 196/427 (45%), Gaps = 49/427 (11%)
Query: 12 MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 71
M+K Q + + PL+GL ++KD+FD G T G+ A A+ APA+ +
Sbjct: 59 MDKLRCQGQAPS---PLAGLPISVKDLFDEAGSTTRAGSMVLADAPPASMD-APAIARLK 114
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFS 129
G SIG+T M E A+S G N H+GTP NP D R+PGGSSSG+AV+V +
Sbjct: 115 QAGLISIGRTTMTEFAFSGIGINPHFGTPANPWRRDEKRIPGGSSSGAAVSVSDNMAFVG 174
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF------AWDPKILN 183
+G+DTGGS R+PA+ G+ G++P+ S +ST G +P++ + D++G W L
Sbjct: 175 IGSDTGGSCRIPAALTGLVGYKPTSSRISTQGTVPLSSTLDSIGSIGRTVACCWAADSLM 234
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVIL 243
G V +Q D R + LS+ + + + + E G VIL
Sbjct: 235 ATGTVRIQ---DAPTGRDGHTLRLG---ILSTSVMEDMDETAAHTWEDCLGRLSRNGVIL 288
Query: 244 GDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLG 303
+ + + S+G P+ +L+ LL+ T +
Sbjct: 289 ETFTCPPLTEIPKANSKGG------FPAAESLAWHQHLLE-------------TRRSVYD 329
Query: 304 PGISERVWEAV-RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDP 361
P + +R+ +T+ I + QS +R A + ++ + +++PTVP PK+ M+
Sbjct: 330 PFVLQRILRGYEQTAVDYIALLQSRAKLIRQA-ADIMNHYDAVILPTVPIIAPKINDMND 388
Query: 362 SALEVFRARAFSLL-----SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+A R A +LL +IA C +S+P PV + ++ +H D L ++
Sbjct: 389 NA----RYVATNLLLLRNTTIANFLDLCAISLPCHHAGEAPVGLMVMGRHAEDCDLFHIA 444
Query: 417 ETLHNTL 423
L L
Sbjct: 445 AQLERIL 451
>gi|239826826|ref|YP_002949450.1| amidase [Geobacillus sp. WCH70]
gi|239807119|gb|ACS24184.1| Amidase [Geobacillus sp. WCH70]
Length = 470
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 180/419 (42%), Gaps = 35/419 (8%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
S ++ PL G+ AIKD + G+ + +T L+ GA GK
Sbjct: 66 SGNYRGPLHGIPVAIKDNIYIANETATMGSKIHRNFQPSYHATVVEKLS--EAGAVFPGK 123
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
+ E A+ N H+G NP +R+ GGSS GS VA A + SLGTDTGGS+R+
Sbjct: 124 LNLHEYAWGATNNNPHFGPVRNPWDTERISGGSSGGSGVATAAHMTIASLGTDTGGSIRI 183
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVR 200
P+S+CGI G +P+H VS G P+A S D +G K + VL
Sbjct: 184 PSSFCGIVGLKPTHGLVSKYGCFPLAWSLDHIGPMT---KTVEDAAYVL----------- 229
Query: 201 PSQVIFAEDCLQLSSI--PSDRVTQGLVKSVEKLFGG---HIIENV--ILGDYVKDKVPS 253
+ I D +SI P+ R + L +SV+ + G + +NV + VK+ + S
Sbjct: 230 --EAIAGYDPKDPTSIDAPTARYSTQLTESVKGVKIGIEPYFFDNVDAEVEKAVKNAISS 287
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA 313
L+ EG + IP+L A + E H + + D G + +
Sbjct: 288 LER---EGAIVETVRIPTLQYAQYAEMITIISEANAIHHHNLVEREEDFGDDVRFLLKLG 344
Query: 314 VRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSAL---EV-FRA 369
SA Q ++ +L + +++ PT+P PPK+ D L EV F
Sbjct: 345 EIPSAVDYLQAQQIRLQLDREFMEIFNKVDVIITPTLPLLPPKIGQDTVLLNGKEVNFLD 404
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV---ETLHNTLKE 425
++G V++P G LPV + ++ +G +LN+ E LH LK+
Sbjct: 405 HIIRFTGPFNLTGLPAVTVPCGFAKELPVGMQIVGPAFGEGKILNVADVFEKLHPELKQ 463
>gi|378578474|ref|ZP_09827149.1| amidase [Pantoea stewartii subsp. stewartii DC283]
gi|377818754|gb|EHU01835.1| amidase [Pantoea stewartii subsp. stewartii DC283]
Length = 466
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 168/390 (43%), Gaps = 38/390 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +A+K++FDV G+ T G + R AT A A+ + GA G MD
Sbjct: 70 PLAGIPYAVKNLFDVQGYTTLAGARLF-RQRPTATRDAFAITQLQQAGALLSGMVNMDAY 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP R+ GGSS GSA AV A LV FSLGTDT GS+RVPAS CG
Sbjct: 129 AYGFTTENTHYGATHNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P+ +S +G P S D +G FA RV DD+ LV
Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPFA------RRV--------DDLALV------- 227
Query: 207 AEDCLQ----LSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY----VKDKVPSLQHFL 258
D LQ + +DR + ++ G + +LG + D + Q +
Sbjct: 228 -YDLLQGHDSTDAFQADRPLAATLPQLKN--GAQDLRCAVLGGFFSTWCNDDARAAQLQV 284
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERVWEAVRTS 317
++ + Q+ + + A L+ + + NH +PDL P ER+
Sbjct: 285 AQALQAQDDVVIAEAELARSAAFIMTASEGGNHYLPALRQQPDLFEPHSRERLLAGAMLP 344
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFS 373
A Q + + + L + +L+ P P P + + A+ +A
Sbjct: 345 AAWYVQAQRFRRHFQQQVVPLFAQYDVLIAPATPCSAPLIGQETIAINGQNLPTKASMGM 404
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLL 403
L G ++P+ LP+ + L+
Sbjct: 405 LTQPISFLGLPVCTVPMTTASGLPIGVQLI 434
>gi|355672862|ref|ZP_09058583.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
citroniae WAL-17108]
gi|354814889|gb|EHE99487.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
citroniae WAL-17108]
Length = 495
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 187/418 (44%), Gaps = 71/418 (16%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD G T + + R T TA AV + GA +GKT MDE
Sbjct: 70 PLAGVPMAVKDNMCTKGLRTTC-SSNILRNF-IPTYTAQAVSNLEQAGAVILGKTNMDEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E +G NP + VPGGSS GS AV A ++LG+DTGGS+R P+S+CG
Sbjct: 128 AMGSTTETSAFGVTRNPWNTEHVPGGSSGGSCAAVAAGECFYALGSDTGGSIRQPSSFCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNLVRPS-- 202
+ G +P++ VS G+I S D +G A D + VL D +L R
Sbjct: 188 VAGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVADCAAILEVLASHDTKDSTSLERKDCD 247
Query: 203 -QVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVIL--GDYVKDKVPSLQHFL 258
ED + IP + QGL + V ++ +L D +K+K ++ F
Sbjct: 248 FTAALKEDVKGMRIGIPEPYLGQGLDREV---------KDAVLRAADVLKEKGAVVETF- 297
Query: 259 SEGNKEQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPDLGPGI 306
+ +Y+IP+ ++SA L R+ E++ H + + GP +
Sbjct: 298 --DLQLVDYAIPAYYVIASAEASSNLSRFDGVKYGYRTPEYEGLHSMYKKSRSEGFGPEV 355
Query: 307 SERVW----------------EAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTV 350
R+ +A+RT A +K E A S ++ +++ P
Sbjct: 356 KRRIMLGSFVLSSGYYDAYYLKALRTKAL-------IKKEFDQAFS----NYDVILAPAS 404
Query: 351 PGPPPKLQ---MDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDN-LPVAISLL 403
PG P+L DP L+++ +++ +++AG+ G +++P G+ LP+ + L+
Sbjct: 405 PGTAPRLGESLKDP--LKMYLGDIYTISVNLAGLPG---ITVPCGMDSKGLPIGLQLI 457
>gi|354566978|ref|ZP_08986149.1| amidohydrolase, AtzE family [Fischerella sp. JSC-11]
gi|353544637|gb|EHC14091.1| amidohydrolase, AtzE family [Fischerella sp. JSC-11]
Length = 463
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 177/403 (43%), Gaps = 29/403 (7%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FDV G +T +S AT A AV + G +G MDE A
Sbjct: 71 LAGVPFAVKNLFDVAG-ITTLAGAKINAENSPATQDATAVARLKQAGGILVGALNMDEYA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP +RV GGSS GSA AV A LV +LG+DT GS+RVPA+ CG+
Sbjct: 130 YGFVTENSHYGATHNPHDLNRVAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCGV 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FGF+P++ +S AGV + SFD +G FA + + V V LQ D+ + V
Sbjct: 190 FGFKPTYGRLSRAGVALFSSSFDHIGPFARSVRDIATVFDV-LQGEDERDPV-------- 240
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYV-----KDKVPSLQHFLSEGN 262
C + P G+ S++ + G I I GDY + + ++Q +
Sbjct: 241 --C---TKRPPVETRHGV--SLQNIDG---IRIAIAGDYFCKGANLEALAAVQKVADALH 290
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+ SIP +A ++ E N H + + D P +R +
Sbjct: 291 VTEYVSIPEAHRARAAAFVITACEGANLHLEKLRQRPQDFDPATRDRFLAGALIPSHWYM 350
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIA 378
Q ++ R + + I++ PT P P + L+ + R
Sbjct: 351 QAQRFRSWFRDRVREVFEKVDIIIAPTTPISAPLIGQQTMILDGEEILVRPHLGLFTQPL 410
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
G +S+P+ + LP+ + L+A + +L + L
Sbjct: 411 SFIGLPVLSVPIQRTNALPLGVQLIAAPYHEALILQVASVLET 453
>gi|227830345|ref|YP_002832125.1| amidase [Sulfolobus islandicus L.S.2.15]
gi|227456793|gb|ACP35480.1| Amidase [Sulfolobus islandicus L.S.2.15]
Length = 397
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 182/426 (42%), Gaps = 45/426 (10%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+S Y AF+ ++ + L +TF IKD+ G T G+ + A
Sbjct: 7 NSKYNAFITLHNIEENDKGK---LKDVTFGIKDVILTKGIRTTAGS--RILENYVPQKNA 61
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V A+L G IGKT E A + G NP P+R+ GGSS GSAVAV
Sbjct: 62 YVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVDPERISGGSSGGSAVAVKLD 121
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP-KILN 183
++D +GTDTGGSVR+P+S CG+ GF+P+ + T GVIP + S DTVG D +L
Sbjct: 122 MIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLR 181
Query: 184 RVGRVLL-QLADDVNL----VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII 238
RV +L V + RP +F D +++S I L+K + +
Sbjct: 182 RVFDAILPNEKKKVEIAKLRTRPRLGLFLFDEMEVSRI--------LLKEIYAKLSSYF- 232
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
D V+ +P L+ + S+ + SLA SS H DW+T
Sbjct: 233 ------DIVEVDLPLLRQYGSKTRRTI-----SLAEASSY------------HKDWITEN 269
Query: 299 KPDLGPGISERVWEAVRTSAQK-IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ + ++ SA ID + + + + L + ++ PT PK+
Sbjct: 270 SNKYFKDTYTLLLDGMKISATDYIDAIRYRRVLIEEYIK-LFKNIDFILSPTTKIVAPKI 328
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
S FR + + V G +SIP + LPV + + + DG LL + E
Sbjct: 329 SDVLSNPLQFREYLIANTELFNVVGAPSISIPFSTLNELPVGLMISGELYKDGDLLEVTE 388
Query: 418 TLHNTL 423
+ N +
Sbjct: 389 YILNVV 394
>gi|387901671|ref|YP_006332010.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Burkholderia sp. KJ006]
gi|387576563|gb|AFJ85279.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Burkholderia sp. KJ006]
Length = 458
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 178/426 (41%), Gaps = 68/426 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNP--DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
PL+G+ ++KD+FDV G VT G+ D A A + A AV + GA +G+T M
Sbjct: 73 PLAGIPVSVKDLFDVAGQVTRAGSRVLDGA---PPAQADAVAVARLRRAGAVLVGRTNMS 129
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGS------SSGSAVAVGAKLVDFSLGTDTGGSV 138
E A+S G N H+GTP +P D VPG + SSG+A +V + +LGTDTGGS+
Sbjct: 130 EFAFSGLGLNPHFGTPRSPYRRD-VPGDARIAGGSSSGAAASVADGMAAVALGTDTGGSI 188
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R+PA+ CG+ GF+P+ S + T G +P++ + D+ G V RVL L V
Sbjct: 189 RIPAALCGLTGFKPTASRIPTGGAVPLSTTLDSFGPIGLTVACCALVDRVLAGLEPHVPA 248
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG---DYVKD------ 249
RP +E V LG +YV D
Sbjct: 249 ARP------------------------------------LEGVRLGVLTNYVTDGVDADV 272
Query: 250 ---KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPG 305
SL+H + G + P+L L R E H + + P
Sbjct: 273 AAALDASLKHLEAAGAIVSDVRFPALDTLPDVNRFGFSPIEAYAWHRPLLAQHRDRYDPR 332
Query: 306 ISERVWEAVRTSAQK-IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDP 361
+ R+ + SA +D+ + L A + LV PTVP PP+ L+ D
Sbjct: 333 VLARILKGEPASAADYLDLLAARAAMLDEAARTVWSRFDALVAPTVPIVPPRIADLEADD 392
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL---VET 418
+A A + C +S+P PV + L A D LL + VE
Sbjct: 393 AAFAHTNALVLRNPAAFNFLDACALSLPCQPRGAAPVGLMLAAAPHRDDALLAIGQAVEA 452
Query: 419 LHNTLK 424
+ NT++
Sbjct: 453 VLNTIR 458
>gi|347534738|ref|YP_004841408.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504794|gb|AEN99476.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 482
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 173/382 (45%), Gaps = 68/382 (17%)
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
A V + + GA +GKT MDE A + EN + T NP D VPGGSS GSA V A
Sbjct: 102 ATVVEKLKAAGAVFVGKTNMDEFAMGSSTENSAFATTRNPWNLDTVPGGSSGGSAATVSA 161
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
V SLG+DTGGS+R PA++ G+ G +P++ VS G+I SFD +G F + K
Sbjct: 162 GQVLASLGSDTGGSIRQPAAFTGVVGMKPTYGRVSRWGLIAFGSSFDQIGPFTRNVK--- 218
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAED----CLQLSSIPS-----DRVTQGLVKSVEKLFG 234
D+ +L+ VI D L +P D+ +GL ++ K F
Sbjct: 219 ----------DNAHLL---NVIAGHDEHDATSSLKEVPDFAEGIDQGVKGLKIALPKEF- 264
Query: 235 GHIIENVILGDYVKDKV-----PSLQHFLSEGNKEQEYSIPS---------LAALSSAMR 280
LGD VK ++ + + + S G +E S+P+ + A S A
Sbjct: 265 --------LGDGVKPEIKEAIQKAAETYKSLGATVEEVSLPNTKYGVMAYYVLASSEASS 316
Query: 281 LLQRY----------EFKNNHGDWVTTVKPDLGPGISERVWEAVRT-SAQKIDV----CQ 325
L+R+ E KN +V T G + R+ + SA D
Sbjct: 317 NLERFDGIRYGFRAPEVKNLEDLYVKTRSEGFGDEVKRRIMIGTFSLSAGSFDKYFKQAA 376
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPS-ALEVFRARAFSL-LSIAGVSGF 383
V+T++ + D+ +++ PT K+ + S +E++ A ++ +++AG+ G
Sbjct: 377 KVRTKIINDFQKVFKDYDLIMTPTATSTAFKIGEESSDPMEMYLNDALTIPVNLAGLPG- 435
Query: 384 CQVSIPLGLHDNLPVAISLLAK 405
+S+P G + LP+ + L+ +
Sbjct: 436 --MSLPAGFSNGLPIGLQLIGR 455
>gi|239616733|ref|YP_002940055.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Kosmotoga olearia
TBF 19.5.1]
gi|239505564|gb|ACR79051.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Kosmotoga olearia
TBF 19.5.1]
Length = 475
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 198/438 (45%), Gaps = 37/438 (8%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+ + AF E + P ++ + PL+G+ +A+KD G T G+ + S +T
Sbjct: 34 NDELNAFTE-IIPDPDRTSGEGPLNGIPYALKDNILARGTKTTCGSKILSNYKSVYDATV 92
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
L GA +GKT MDE A + E +G NP +RVPGGSS GSA AV A
Sbjct: 93 TKRLR--DSGAILMGKTNMDEFAMGSSTEFSAFGPSKNPWDANRVPGGSSGGSAAAVAAG 150
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
LV F+LG+DTGGS+R PA++CG+ G++PS+ VS G++ A S D +G
Sbjct: 151 LVPFALGSDTGGSIRQPAAFCGVVGYKPSYGLVSRYGLVAFASSLDQIGPITRCVDDAVE 210
Query: 185 VGRVLLQL-ADDVNLVRPSQVIFAEDCLQLS----SIPSDRVTQ-GLVKSVEKLF----- 233
V +V++ DD + E+ L+ ++P + + GL +SV+++F
Sbjct: 211 VAKVIIGFDPDDSTTIEHPLNFENEEPKDLTGLKFALPGEMIEYPGLQESVKEVFIKMVE 270
Query: 234 ----GGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKN 289
G I+E V +PSL++ ++ S + +R QR +
Sbjct: 271 SIEKAGGIVEKV--------SIPSLKYVVATYYLIAPGEASSNLSRYDGIRYGQRKD--A 320
Query: 290 NHGDWVTTVKPDLGPG--ISERVWEAVRT-SAQKIDVCQSVKTELRAALSA----LLGDH 342
+ + V D G G + R+ T SA D +R +S +L +
Sbjct: 321 DRYEEVVNQSRDFGFGDEVKRRILLGTFTLSAAYYDAYYRKALRVRKLISKEINEILSKY 380
Query: 343 GILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISL 402
++ PT P PK+ L + +++ A ++G +S+P G ++ LPV +
Sbjct: 381 DFVINPTSPIVAPKIGEISDPLTYYLMDIYTI--PANLAGLPAISLPAGAYEGLPVGFQM 438
Query: 403 LAKHGSDGFLLNLVETLH 420
+A+ D +LN L
Sbjct: 439 MARRFEDVRMLNTARILE 456
>gi|347761916|ref|YP_004869477.1| amidase [Gluconacetobacter xylinus NBRC 3288]
gi|347580886|dbj|BAK85107.1| amidase [Gluconacetobacter xylinus NBRC 3288]
Length = 456
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 169/399 (42%), Gaps = 37/399 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ F +KD+FDV G VT G+ R + AT A V + + GA + MDE
Sbjct: 73 PLAGVPFGVKDLFDVCGEVTTAGS-IVLRDNLPATQDATVVARLRAAGAVPVATLNMDEF 131
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY + EN H GT NP P R+ GGSS GSA +V A ++ F+LG+DT GS+RVP++ CG
Sbjct: 132 AYGFSTENAHTGTTRNPHDPTRLVGGSSGGSAASVAAGMLPFTLGSDTNGSIRVPSALCG 191
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G +P++ + GV P S D VG A + L V I
Sbjct: 192 VWGIKPTYGQMPLQGVYPFVASLDVVGPMAVTVQDLQAV-----------------YTIM 234
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A L L ++ RV + GG N+ + L ++ +
Sbjct: 235 AGRSLTLPAVGDVRVAR---------LGGWFAHNI-----SAEMAAGLDGVMAHLGSGRV 280
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A ++ L+ E N H + P R+ A Q
Sbjct: 281 IELPEVARARASAFLISAAEGGNLHLPRLRLRSMQYDPATRSRLMAGAILPAATFVQAQR 340
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVSG 382
+ RA + L +L+ PT G P++ L+ A + L I ++G
Sbjct: 341 FRRWFRAQVHEALAQADVLIAPTTVGIAPRIDQPTIMLDGKSVSARANLGIFTQPISLTG 400
Query: 383 FCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+++PL + D +P+ I L+ G + L + L
Sbjct: 401 LPVLAVPLAV-DGMPLGIQLVGAPGGEDRLFAVAAELQR 438
>gi|194292556|ref|YP_002008463.1| amidase [Cupriavidus taiwanensis LMG 19424]
gi|193226460|emb|CAQ72409.1| putative amidase [Cupriavidus taiwanensis LMG 19424]
Length = 451
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ F +K++ DV GH T G A+ AAT A AV A+ + GA + MDE
Sbjct: 69 PLAGVPFVVKNLLDVRGHATLAGAAPRAQ-EPAATRHADAVEALAAAGAVPVALASMDEY 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A GEN G NP P R+ GGSS+G+A V A +V F LG+DT GS+R PA++CG
Sbjct: 128 ACGATGENVIGGPVRNPLDPARITGGSSAGTAALVAAGVVPFGLGSDTNGSIRAPAAFCG 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
I+G RP+ +S AG +P AQS DTVG A
Sbjct: 188 IWGLRPTTGRLSLAGCVPYAQSLDTVGPMA 217
>gi|420255074|ref|ZP_14758031.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398046943|gb|EJL39524.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 466
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 186/413 (45%), Gaps = 43/413 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ ++KD+FD++G VT G+ A + ATS APAV + GA +G+T M E
Sbjct: 82 PLAGIPVSVKDLFDIEGQVTRAGSKVLAGA-APATSDAPAVARLKRAGAVIVGRTNMSEF 140
Query: 87 AYSINGENKHYGTPTNPC-----APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
A+S G N HYG P +P +RV GGSSSG+A +V + +LG+DTGGS+R+P
Sbjct: 141 AFSGLGLNPHYGNPLSPYRRGVKGDERVSGGSSSGAAASVADGMAAVALGSDTGGSLRIP 200
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A+ CG+ GF+P+ V G +P++ + D G V R+L L
Sbjct: 201 AALCGLTGFKPTADRVPKQGGVPLSPTLDAFGPIGATVACCALVDRILAGLE-------- 252
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+P+ R +G+ V H + + I + + +L+H + G
Sbjct: 253 ------------PVVPAARRLEGVRLGVLN----HYVTDDIEPEVAQAYDAALKHLEAAG 296
Query: 262 NKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTSAQ 319
+ L L++ R E H + T + P + R+ + T+A
Sbjct: 297 AIVSDVRFAPLDRLATINRFGFSPIEAYAWHRPLLETQRDAYDPRVLTRILKGQPATAAD 356
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLLS 376
+D+ + + A + +V PTVP PP+ L D A FRA L +
Sbjct: 357 YLDLLAE-RAAMLAEARTMWQRFDAVVAPTVPIVPPRVAGLVDDDEAF--FRANGLVLRN 413
Query: 377 IAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL---VETLHNTLK 424
+ + C +S+P PV + L A +D LL + VE + NT++
Sbjct: 414 PSAFNFLDACAISLPCHPRGGAPVGLMLAAAPHADDALLGIGRAVEAVLNTIR 466
>gi|410479584|ref|YP_006767221.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Leptospirillum
ferriphilum ML-04]
gi|206603870|gb|EDZ40350.1| Glutamyl-tRNA(Gln) amidotransferase A subunit/Amidase
[Leptospirillum sp. Group II '5-way CG']
gi|406774836|gb|AFS54261.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Leptospirillum
ferriphilum ML-04]
Length = 492
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 177/433 (40%), Gaps = 65/433 (15%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
P G AIKD V T + A +T V +L GA +GKT MDE
Sbjct: 69 PFYGYPVAIKDNLHVRDLPTTCASRMLANFRPVENATV--VDRLLEAGAIVLGKTNMDEF 126
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN G NP RVPGGSS GSAVAV A + +LG+DTGGS+R PA++CG
Sbjct: 127 AMGSSTENSAMGVTRNPWDLRRVPGGSSGGSAVAVAADMAPMALGSDTGGSIRQPAAFCG 186
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G +P++ +S G++ + S D +G FA + + + +LL D
Sbjct: 187 VLGLKPTYGRISRYGLVAFSSSLDQIGPFARHAE--DALEMMLLLSGPD----------- 233
Query: 207 AEDCLQLSSIPSD------RVTQGLVKSVEKLFGGHIIENVILG--DYVKD--------- 249
D S PS+ R QG V + + F G ++ + G + KD
Sbjct: 234 GRDMTVESRDPSEMARDFGRKVQGTVIGMPEEFFGDGLDPAVAGSLERAKDVLAAAGAVF 293
Query: 250 ---KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYE----------FKNNHGDWVT 296
++PS Q+ + ++ + A S A L RY+ KN +
Sbjct: 294 RPIRLPSAQYGI---------NVYYIIATSEAASNLSRYDGVRYGYRSLKAKNIRDLYTH 344
Query: 297 TVKPDLGPGISERVWEAVRTSA-----QKIDVCQSVKTELRAALSALLGDHGILVIPTVP 351
T + GP + R+ + Q Q V+ +R + ++ PT P
Sbjct: 345 TRQEGFGPEVKRRILLGTFALSAGYQDQYYRKAQQVQALIREEFDRAFHEVDVIFAPTTP 404
Query: 352 GPP---PKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGS 408
PP + DP A+ + S ++AG+ S P + LPV L+ S
Sbjct: 405 TPPFLFGEKVSDPLAMYLSDIYTIS-ANLAGLPALSAPSWP--TPEGLPVGAQLIGPAWS 461
Query: 409 DGFLLNLVETLHN 421
+G LL L L
Sbjct: 462 EGRLLRLAAILEE 474
>gi|386857372|ref|YP_006261549.1| Glutamyl-tRNA amidotransferase subunit A [Deinococcus gobiensis
I-0]
gi|380000901|gb|AFD26091.1| Glutamyl-tRNA amidotransferase subunit A [Deinococcus gobiensis
I-0]
Length = 445
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 181/435 (41%), Gaps = 59/435 (13%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S LPL+G+ +KD +V G T G+ A S T+TA L L GA +GK
Sbjct: 20 SGEALPLAGVPVIVKDNINVTGTATTCGSRILANYVSPYTATAAQRL--LDAGAVIVGKA 77
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE A + E+ G NP RVPGGSS GSAVAV A L SLG+DTGGSVR P
Sbjct: 78 NMDEFAMGSSTESSASGPTLNPWDQGRVPGGSSGGSAVAVAAGLTPVSLGSDTGGSVRQP 137
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A+ G++G +P++ VS G++ A S D +G FA R L L + V P
Sbjct: 138 AALTGVYGLKPTYGRVSRYGLVAYASSLDQIGPFA-------RSAEDLALLMNVVAGYDP 190
Query: 202 SQVIFAEDCLQLSSIPSDRV-----TQGL-VKSVEKLFGGHI--IENVILGDYVKDKVPS 253
D L + P+ R +GL V + + GG+ +E + +
Sbjct: 191 ------RDATSLEAPPAFRAGTPDDLRGLRVGVIRESLGGNTPGVEAALNA--------T 236
Query: 254 LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDW------VTTVKPDL----- 302
L+ G E S+PSL +A L+ E +N + + PDL
Sbjct: 237 LEALRGAGAAVGEVSLPSLRHAIAAYYLIAMPEASSNLARFDGMVYGARSAAPDLTGSMT 296
Query: 303 -------GPGISERVWEAVRT-SAQKIDVCQSVKTELRAALS----ALLGDHGILVIPTV 350
G + R+ S+ D S +R +S A G + +LV PT
Sbjct: 297 LTREQGFGREVQRRIMIGTYALSSGYYDAYYSKAMRVRRLISDEFTAAFGGYDVLVTPTS 356
Query: 351 PGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD----NLPVAISLLAKH 406
P P + S A +++ ++G +S+P G LPV + +A
Sbjct: 357 PFPAFRRGEKTSDPLAMYAADVDTVAV-NLAGLPALSVPAGFETVDGVRLPVGVQFIAPA 415
Query: 407 GSDGFLLNLVETLHN 421
D L+ L L
Sbjct: 416 LHDERLVALAGGLEG 430
>gi|374999327|ref|YP_004974825.1| Putative Glu-tRNA amidotransferase [Azospirillum lipoferum 4B]
gi|357426752|emb|CBS89683.1| Putative Glu-tRNA amidotransferase [Azospirillum lipoferum 4B]
Length = 444
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 174/399 (43%), Gaps = 25/399 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G ++K +FDV G +T G+ +A AV + + GA +G+T M E
Sbjct: 67 PLDGRIVSVKALFDVAGDITAAGSAILRGRPAARRDAR-AVARLRAAGAVIVGRTHMTEF 125
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+S G N HYG P NP RVPGGSSSG+ ++V + + ++G+DTGGS+R+PA+ G
Sbjct: 126 AFSAVGINPHYGNPGNPRDRSRVPGGSSSGAVISVVEGMAEIAVGSDTGGSLRIPAALSG 185
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
GF+P+ +S G P++ S D +G A +AD L ++
Sbjct: 186 AVGFKPTAGRLSAEGAFPLSPSLDAIGPIAS-------------TVADAALL---DSIVS 229
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
D L+ +P Q + +LF G + D++ + + EG+ + E
Sbjct: 230 DSDPAPLAPLPV--AGQSFLVPRWRLFDGIEPAVAAAFEAALDRLRAAGAQIIEGSIDAE 287
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+LA L + + E + T + P R+ RT A Q
Sbjct: 288 LD--ALADLDR-IGVFTAIELAATLAELGITALDGIDPKTRARIEAGGRTPAADYVRMQR 344
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQ--MDPSALEVFRARAFSLLSIAGVSGFC 384
+ +L + L H +L++PTVP P + ++ +A IA +
Sbjct: 345 RRADLIRLMDERLARHPVLLLPTVPLTAPTIADVLEDAAFHRVNLLLLRNTRIANLFDLP 404
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+S+P+ LPV + + + GSD LL + L L
Sbjct: 405 AISLPVP-SAGLPVGLMAMGRRGSDRSLLGIAAGLEAVL 442
>gi|398872498|ref|ZP_10627788.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM74]
gi|398202532|gb|EJM89374.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM74]
Length = 382
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G AIKD D+ GH T G+ +A AA A V A+L G +GKT + E+A+
Sbjct: 13 NGKRVAIKDSIDIAGHPTRSGSRAFADA-PAAMKNAEVVDAILDAGWQIVGKTNLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CGI
Sbjct: 72 GVTGINDWTGTPINPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G +P++ VS G P+ S D VG FA
Sbjct: 132 GLKPTYGRVSRVGAHPLESSLDCVGPFA 159
>gi|218295557|ref|ZP_03496370.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermus aquaticus
Y51MC23]
gi|218244189|gb|EED10715.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Thermus aquaticus
Y51MC23]
Length = 471
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 193/445 (43%), Gaps = 62/445 (13%)
Query: 5 DSDYGAFM---EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
D AF+ E+ + + LPL+GL A+KD G T G+
Sbjct: 32 DPGLKAFLTLNERLLEEARRVERDLPLAGLLVAVKDNIATKGLRTTAGSRLLENFVPPYD 91
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
+TA A L + GA +GKT +DE + E+ + NP P RVPGGSS GSA AV
Sbjct: 92 ATAVARLK--AQGALVLGKTNLDEFGMGSSTEHSAFFPSKNPFDPSRVPGGSSGGSAAAV 149
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
A L +LG+DTGGSVR PAS+CG++G +P++ VS G++ A S + +G A
Sbjct: 150 AADLAPLALGSDTGGSVRQPASFCGVYGLKPTYGRVSRFGLVAYASSLEGIGPMA----- 204
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
R R L L D + + P D L P R + L + + L G + E
Sbjct: 205 --RSVRDLALLMDAMAGLDPM------DATSLDLPP--RFQEALEEPLPPLRLGVVREG- 253
Query: 242 ILGDYVKDKVPSLQHFLSE--------GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGD 293
+ P ++ L E G + +E S PSL +A +L E +N
Sbjct: 254 -----LSGNSPGVERALEEALGVFQGLGLRVKEVSWPSLPLALAAYYILAPAEASSNLAR 308
Query: 294 WVTTVKPDLGPGISERVWEAVRTSAQKI------------------------DVCQSVKT 329
+ T+ G E VW+ V + + + Q+ +
Sbjct: 309 YDGTLFGTRAEG--EEVWQVVEATRARFGLEVKRRVLVGTFVLSSGYYEAYYERAQAFRA 366
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIP 389
L+A AL + +L++PT P P L P L ++R +++ A ++G +S+P
Sbjct: 367 RLKAEARALFQEVDLLLLPTTPHPAFPLGGRPDPLAMYREDLYTV--GANLTGLPALSLP 424
Query: 390 LGLHDNLPVAISLLAKHGSDGFLLN 414
G +LPV + LLA G D LL
Sbjct: 425 AGFEGHLPVGLQLLAPWGKDELLLR 449
>gi|39934847|ref|NP_947123.1| amidase [Rhodopseudomonas palustris CGA009]
gi|39648697|emb|CAE27219.1| putative Glu-tRNA amidotransferase [Rhodopseudomonas palustris
CGA009]
Length = 452
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
++ A P +G+ +IKD+FD+ G VT G+ + A S APAV + G IG
Sbjct: 66 AAKAAPSPFAGIPISIKDLFDIKGQVTRAGSRAL-DDNPPADSDAPAVARLRRAGFVVIG 124
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
++ M E AYS G N HYGTP + VPGGSSSG+AV+V + LGTDTGGS
Sbjct: 125 RSNMTEFAYSGIGINPHYGTPKAAYRRNVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGS 184
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
R+PA++ GI G++PS V G +P++ S D++G A
Sbjct: 185 CRIPAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLA 223
>gi|258543145|ref|YP_003188578.1| amidase [Acetobacter pasteurianus IFO 3283-01]
gi|384043067|ref|YP_005481811.1| amidase [Acetobacter pasteurianus IFO 3283-12]
gi|384051584|ref|YP_005478647.1| amidase [Acetobacter pasteurianus IFO 3283-03]
gi|384054691|ref|YP_005487785.1| amidase [Acetobacter pasteurianus IFO 3283-07]
gi|384057926|ref|YP_005490593.1| amidase [Acetobacter pasteurianus IFO 3283-22]
gi|384060567|ref|YP_005499695.1| amidase [Acetobacter pasteurianus IFO 3283-26]
gi|384063859|ref|YP_005484501.1| amidase [Acetobacter pasteurianus IFO 3283-32]
gi|384119868|ref|YP_005502492.1| amidase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256634223|dbj|BAI00199.1| amidase [Acetobacter pasteurianus IFO 3283-01]
gi|256637283|dbj|BAI03252.1| amidase [Acetobacter pasteurianus IFO 3283-03]
gi|256640335|dbj|BAI06297.1| amidase [Acetobacter pasteurianus IFO 3283-07]
gi|256643392|dbj|BAI09347.1| amidase [Acetobacter pasteurianus IFO 3283-22]
gi|256646447|dbj|BAI12395.1| amidase [Acetobacter pasteurianus IFO 3283-26]
gi|256649500|dbj|BAI15441.1| amidase [Acetobacter pasteurianus IFO 3283-32]
gi|256652486|dbj|BAI18420.1| amidase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655544|dbj|BAI21471.1| amidase [Acetobacter pasteurianus IFO 3283-12]
Length = 453
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 46/412 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD+FD G T G+ A A+ APA+ + G SIG+T M E
Sbjct: 71 PLAGLPISVKDLFDEAGSTTRAGSMVLADA-PPASMDAPAIARLKQAGLISIGRTTMTEF 129
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N H+GTP NP D R+PGGSSSG+AV+V + +G+DTGGS R+PA+
Sbjct: 130 AFSGIGINPHFGTPANPWRRDEKRIPGGSSSGAAVSVSDNMAFVGIGSDTGGSCRIPAAL 189
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
G+ G++P+ S +ST G +P++ + D++G +GR V +
Sbjct: 190 TGLVGYKPTSSRISTQGTVPLSSTLDSIG----------SIGRT-------VACCWAADS 232
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKE 264
+ A +++ P+ R L ++ ++ D + + + LS ++
Sbjct: 233 LMATGTIRIQDAPTGRDGHTLRLG--------MLSTSVMEDMDETVAHTWEDCLSRLSRN 284
Query: 265 ----QEYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTS 317
+ ++ P L + A E H + T + P + +R+ +T+
Sbjct: 285 GVILETFTCPPLTEIPKANSKGGFPAAESLAWHQHLLETRRSVYDPFVLQRILRGYEQTA 344
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-MDPSALEVFRARAFSLL- 375
I + QS +R A + ++ + +++PTVP PK+ M+ +A R A +LL
Sbjct: 345 VDYIALLQSRAKLIRQA-ADIMNHYDAVILPTVPIIAPKINDMNDNA----RYVATNLLL 399
Query: 376 ----SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+IA C +S+P PV + ++ +H D L ++ L L
Sbjct: 400 LRNTTIANFLDLCAISLPCHHAGEAPVGLMVMGRHAEDCDLFHIAAQLERIL 451
>gi|17228513|ref|NP_485061.1| amidase [Nostoc sp. PCC 7120]
gi|17130364|dbj|BAB72975.1| Glu-tRNA(Gln) amidotransferase subunit A [Nostoc sp. PCC 7120]
Length = 464
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 176/407 (43%), Gaps = 40/407 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD+ G T G A + A+ A AV + GA +G MDE A
Sbjct: 67 LAGVPFAVKNLFDIAGLTTLAGAKINAE-NPPASRDATAVAKLKQAGAVLVGALNMDEYA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP RV GGSS GSA AV A LV FSLG+DT GS+RVPA+ CG+
Sbjct: 126 YGFVTENSHYGATHNPQDLQRVAGGSSGGSAAAVAAGLVTFSLGSDTNGSIRVPAALCGV 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV-----LLQLADDVNLVRPS 202
FGF+P++ +S AGV + SFD +G FA VG + +LQ DD + +
Sbjct: 186 FGFKPTYGRLSRAGVALFSSSFDHIGPFA------RSVGDIATIFDILQGEDDRDPI--- 236
Query: 203 QVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS-----LQHF 257
C Q P++ L + + I I DY + S +Q
Sbjct: 237 -------CTQR---PANPTLPQLNQDISH------IRIAIADDYFQKGATSAALAAVQEV 280
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
+ N ++P +A ++ E N H D + T D P +R
Sbjct: 281 ANALNVTNYVTLPEAHRARAAAFVITASEGANLHLDKLRTRPQDFDPATRDRFLAGALIP 340
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFS 373
+ Q + R + + + +++ PT P P + L+ + R
Sbjct: 341 SNWYIQAQRFRQWYRDRIREVFQNVDVILAPTTPITAPLIGQQTMILDGEEILVRPHLGL 400
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
G +S+P+ + LP+ + L+A ++ +L + L
Sbjct: 401 FTQPLSFIGLPVLSVPIQCPNALPLGVQLIAAPYNEALILQVAAVLE 447
>gi|358635180|dbj|BAL22477.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Azoarcus sp. KH32C]
Length = 488
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A KD+F +G +T G+ ++ + A V + + GA ++GKT MDE
Sbjct: 67 PLTGIPLAHKDVFCTEGLLTTCGSK--MLSNFVSPYDAHVVSLLKTAGAVTLGKTNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN HYG NP R+PGGSS GSAVAV A+L + GTDTGGSVR PA++ G
Sbjct: 125 AMGSSNENSHYGPVKNPWDTTRIPGGSSGGSAVAVAARLAPIATGTDTGGSVRQPAAHTG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF 175
+ G +P++ VS G+I A S D G F
Sbjct: 185 VTGIKPTYGIVSRYGMIAYASSLDQGGAF 213
>gi|58039746|ref|YP_191710.1| amidase [Gluconobacter oxydans 621H]
gi|58002160|gb|AAW61054.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconobacter
oxydans 621H]
Length = 395
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 172/401 (42%), Gaps = 41/401 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ F IKD+FDV G +T G+ A AT A V +++GGA I T MDE
Sbjct: 21 PLAGVPFGIKDLFDVRGEITTAGSKVLA-NDPPATQDATLVAHMIAGGAIPIALTNMDEF 79
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N HYG NP AP+R+ GGSS GSA V A++ LG+DT GS+RVPAS CG
Sbjct: 80 AYGFATINAHYGNTRNPHAPERLAGGSSGGSAAGVAARMFSIGLGSDTNGSIRVPASLCG 139
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G R + +S G P S DTVG F AD ++
Sbjct: 140 IWGLRATQGRLSVEGSYPFVPSLDTVGPF-----------------ADSAGGLKACFEAL 182
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
L + S R+ + GG EN + ++ + +L L + +
Sbjct: 183 CARSLTDVDVGSLRIAR---------LGGWFGEN--MSAPMQTAIDTLSMALGATDVVE- 230
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A +A ++ E H + T D P + +R+ + I
Sbjct: 231 --LPEVARARAAAFVISASEGAGQHLGRLRTQAADYDPAVRDRLLAGALLPSTLIFQAHR 288
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV------FRARAFSLLSIAGV 380
++ R + IL+ P + G P+ D +E+ RA +
Sbjct: 289 LRHWFRDRMHEAFAKTDILLAPALVGEAPRF--DQPEIEIGGKMVSARANLGLYTQPLTL 346
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+GF +++P+ + LP+ L+A+ G + L L E L
Sbjct: 347 AGFPVLTVPMKV-PGLPLGAQLIARPGREDQLFALAEKLET 386
>gi|398897016|ref|ZP_10647903.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM55]
gi|398177449|gb|EJM65129.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM55]
Length = 373
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+G AIKD D+ G+ T G+ +A AA+ A V A+L+ G +GKT + E+A+
Sbjct: 13 NGKRVAIKDSIDIAGYPTCSGSRAFADA-PAASKNAEVVDAILNAGWQIVGKTNLHELAF 71
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
+ G N GTP NP APDRVPGGSSSGSA AV A L D ++GTDTGGSVRVPA+ CG+
Sbjct: 72 GVTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGVA 131
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G +P++ VS G P+A S D VG FA
Sbjct: 132 GLKPTYGRVSRVGAHPLASSLDCVGPFA 159
>gi|427731640|ref|YP_007077877.1| amidohydrolase, AtzE family [Nostoc sp. PCC 7524]
gi|427367559|gb|AFY50280.1| amidohydrolase, AtzE family [Nostoc sp. PCC 7524]
Length = 469
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 178/405 (43%), Gaps = 36/405 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD+ G T G+ A + AT A A+ + GA +G MDE A
Sbjct: 67 LAGVPFAVKNLFDIAGLTTLAGSKINAE-NPPATQDATAITKLKQAGAILVGTLNMDEYA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP +RV GGSS GSA AV A LV F+LG+DT GS+RVPA CG+
Sbjct: 126 YGFVTENFHYGATHNPHDLERVAGGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPAGLCGV 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV---RPSQV 204
FGF+P++ +S AGV + S D +G FA + + V + LQ D+ + V RP ++
Sbjct: 186 FGFKPTYGRLSRAGVALFSSSLDHIGPFARSVRDIATVFDI-LQGEDNCDPVCSKRPPEL 244
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK-----DKVPSLQHFLS 259
+ + +S I RV I GDY + + ++Q
Sbjct: 245 VLPQLNQDISGI---RVA-------------------IAGDYFATGADPEALAAVQKVAE 282
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
+ ++ ++P +A ++ E N H D + + D P +R
Sbjct: 283 ALDVDEYVTLPEAHRARAAAFVITACEGANLHLDKLRSRPQDFDPATRDRFLAGALIPNY 342
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLL 375
Q + R + + +++ PT P P + L+ + R
Sbjct: 343 WYLQAQRFRRWYRDCIREVFQQVDVILAPTTPISAPLINQQTMTLDGEEILVRPHLGLFT 402
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
G +S+P+ + LP+ + L+ ++ +L + L
Sbjct: 403 QPLSFIGLPVLSVPIQRSNTLPLGVQLIGAPYNEALILRVASVLE 447
>gi|420254354|ref|ZP_14757362.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398049279|gb|EJL41709.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 379
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 191/409 (46%), Gaps = 58/409 (14%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+ +F L +A G T AIKD DV G+ T G A + A V
Sbjct: 3 AFISEFTLSADPAAQ-----GPTIAIKDSIDVAGYPT-TGASRSLADAPPAAAHAEVVQR 56
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L G GKT M E+A+ + G N + GTP NP R+PGGSSSGSA AVGAKLVD +
Sbjct: 57 LLDAGWRITGKTNMHELAFGMTGINDYTGTPVNPQDTARIPGGSSSGSASAVGAKLVDAA 116
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDTGGS+R PA+ CG+ G +P+ VS G +P + D VG F D +
Sbjct: 117 LGTDTGGSIRGPAACCGVIGLKPTFGRVSRKGAVPRESTLDCVGPFTRD----------I 166
Query: 190 LQLADDVNLVRPS------QVIFAEDCLQLSSIPSD-RVTQGLVKSVE-KLFGGHIIENV 241
L D + + P+ + A + + S+ +D + QG+ ++V+ F IE
Sbjct: 167 ATLVDAMAAIAPTFDTNAAKRANAGANVAIVSVDADAAIRQGVARAVQIAAFASRAIEL- 225
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
D++K+ + + L+ N E + L V T K
Sbjct: 226 ---DHLKE---AFEAGLAVINVETARAFAHL----------------------VETRK-- 255
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
LG + R+ AV+T+ ++D + + AA+ L + +LV+PT+P P ++
Sbjct: 256 LGADVDARLRVAVQTTQAQLDAAEHARRAFTAAVDRALENADVLVLPTLPTLPITIEAAR 315
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSD 409
+ V SL+ +SG +S+P+ + + + + ++ + G+D
Sbjct: 316 NGTPVLTMS--SLIRPFNLSGHPALSLPIPIEGSPMKAGLQIVGRKGAD 362
>gi|256369013|ref|YP_003106521.1| amidase [Brucella microti CCM 4915]
gi|255999173|gb|ACU47572.1| amidase [Brucella microti CCM 4915]
Length = 471
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL G +IKD+FDV G T G+ H A + A++ + + GA IGKT M
Sbjct: 78 PLDGRIVSIKDLFDVAGEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 134
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A++ G N HYG P N P R+PGGSSSG+AV+V + ++ +DTGGSVR+PA+
Sbjct: 135 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAISSDTGGSVRIPAAL 194
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GF+P+ + G P+A S D+VG
Sbjct: 195 NGLVGFKPTARRIPLEGAFPLAPSLDSVG 223
>gi|410670530|ref|YP_006922901.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanolobus
psychrophilus R15]
gi|409169658|gb|AFV23533.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanolobus
psychrophilus R15]
Length = 475
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 167/379 (44%), Gaps = 32/379 (8%)
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLG 131
+ GA +GKT MDE A + E+ YG NP RVPGGSS GSA V A SLG
Sbjct: 103 AAGAVILGKTNMDEFAMGTSTESSCYGPTLNPWDTGRVPGGSSGGSAAVVAAGEAPLSLG 162
Query: 132 TDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL-- 189
+DTGGSVR PA++CG+ G +P++ AVS G+I A S + +G A + + V+
Sbjct: 163 SDTGGSVRCPAAFCGVVGLKPTYGAVSRYGLISYANSLEQIGPMATTVADIAILMDVIGG 222
Query: 190 LQLADDVNLVRPSQVI--FAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILG-D 245
D ++ + + + +D L +P + +G+ + V+K I + +G
Sbjct: 223 YDHRDSTSIKKENTYVDSLKDDVKGLKIGVPEEYFGEGIDEGVKKAVWDAIGKYEDMGAS 282
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLG 303
+ K +P ++ L+ Y I +++ SS + RY + W
Sbjct: 283 WKKVSMPHTKYALA------SYYIIAMSEASSNLARFDGTRYGLRVEGETWHIMASKTRA 336
Query: 304 PGISERVWEAVRTSAQKIDV---------CQSVKTELRAALSALLGDHGILVIPTVPGPP 354
G E V + + V+T ++ L D +L+ PT+P P
Sbjct: 337 QGFGEEVKRRILLGTYALSAGYHDKYYLKALKVRTLVKQDFDRALTDVDVLMAPTMPTPA 396
Query: 355 PKLQM---DPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDG 410
K+ DP L ++ A ++ +++AGV +S+P G D LPV + ++ K +
Sbjct: 397 FKIGEKIDDP--LSLYLADVNTVPVNLAGVP---SISVPCGFADGLPVGLQIIGKPFDEN 451
Query: 411 FLLNLVETLHNTLKEELQR 429
+L + +R
Sbjct: 452 TILQAAYSFEQNTDHHTKR 470
>gi|390566658|ref|ZP_10247014.1| amidase [Burkholderia terrae BS001]
gi|389941367|gb|EIN03140.1| amidase [Burkholderia terrae BS001]
Length = 466
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 185/413 (44%), Gaps = 43/413 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ ++KD+FD++G VT G+ A + ATS APAV + GA IG+T M E
Sbjct: 82 PLAGIPVSVKDLFDIEGQVTRAGSKVLANA-APATSDAPAVARLKRAGAVIIGRTNMSEF 140
Query: 87 AYSINGENKHYGTPTNPC-----APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
A+S G N HYG P +P +RV GGSSSG+A +V + +LG+DTGGS+R+P
Sbjct: 141 AFSGLGLNPHYGNPLSPYRRGVKGDERVSGGSSSGAAASVADGMAAVALGSDTGGSLRIP 200
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A+ CG+ GF+P+ V G +P++ + D G V R+L L
Sbjct: 201 AALCGLTGFKPTADRVPKQGGVPLSPTLDAFGPIGATVACCALVDRILAGLE-------- 252
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
+PS R +G+ V H + + + + + +L+H + G
Sbjct: 253 ------------PVVPSARRLEGVRLGVLN----HYVTDDVEPEVAQAYDTALKHLEAAG 296
Query: 262 NKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV-RTSAQ 319
+ L L++ R E H + + P + R+ + T+A
Sbjct: 297 AIVSDVRFAPLDRLATINRFGFSPIEAYAWHRPLLEAQRDAYDPRVLTRILKGQPATAAD 356
Query: 320 KIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLLS 376
+D+ + + A + +V PTVP PP+ L D A FRA L +
Sbjct: 357 YLDLLAE-RAAMLAEARTMWQRFDAVVAPTVPIVPPRVAGLVDDDEAF--FRANGLVLRN 413
Query: 377 IAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL---VETLHNTLK 424
+ + C +S+P PV + L A +D LL + VE + NT++
Sbjct: 414 PSAFNFLDACAISLPCHPRGGAPVGLMLAAAPHADDALLGIGRAVEAVLNTIR 466
>gi|429215234|ref|ZP_19206396.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas sp. M1]
gi|428154461|gb|EKX01012.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas sp. M1]
Length = 448
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 181/410 (44%), Gaps = 59/410 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ AIKDIFDV G T G+ R A + A V A+ + G ++GKT + E+A
Sbjct: 64 LDGIPLAIKDIFDVRGSRTLAGSLTR-REVPPAQADAAVVAALRANGMIALGKTNLSELA 122
Query: 88 YSINGENKHYGTPTN--PCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N H+GTPT P R PGGSS+GSAVAV +V +LG+DTGGSVRVPA++
Sbjct: 123 FSGLGLNPHFGTPTPDFPGVEPRAPGGSSAGSAVAVQRGIVSAALGSDTGGSVRVPAAFN 182
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+ S GV P+A+S D++G I VG
Sbjct: 183 GLAGFKSSPERYPMVGVHPLARSLDSLG------PIARTVG------------------- 217
Query: 206 FAEDCLQLSSIPSDRVTQGL---VKSVEKLFGGH-IIENVILGD-----YVKDKVPSLQH 256
DC+ L D +GL + L G +IE IL D V+ +L
Sbjct: 218 ---DCVLL-----DAAMRGLRAPLIEAAPLAGSRLVIEAGILDDGGIEPAVRCNFLTLMR 269
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG-------ISER 309
L E+ LAA++ +L+ R + W GP +S R
Sbjct: 270 HLQAQGARLEWR--RLAAVAEVRQLIPRDGWLGAIEGWDFLKDLVSGPQGGVIDHRVSSR 327
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP--GPP-PKLQMDPSALEV 366
+ A AQ++ ++ + L A++A L D L +PTV PP L+ D +
Sbjct: 328 LRSAADIPAQRVAAIRAARQRLLQAIAAEL-DGAFLAMPTVRHVAPPLAPLERDDALFAT 386
Query: 367 FRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNL 415
SL I V+IP G+ LP + + A G D +L L
Sbjct: 387 TNMATLSLTMIGSFLNMPGVAIPSGVDPQGLPTSALISAVQGRDDEVLAL 436
>gi|261754565|ref|ZP_05998274.1| amidase [Brucella suis bv. 3 str. 686]
gi|261744318|gb|EEY32244.1| amidase [Brucella suis bv. 3 str. 686]
Length = 445
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA--VLSGGATSIGKTIMD 84
PL G +IKD+FDV T G+ H A + A++ + + GA IGKT M
Sbjct: 52 PLDGRIVSIKDLFDVASEPTLAGS---VVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMT 108
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A++ G N HYG P N P R+PGGSSSG+AV+V + ++G+DTGGSVR+PA+
Sbjct: 109 EFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAAL 168
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
G+ GF+P+ + G P+A S D+VG
Sbjct: 169 NGLVGFKPTARRIPLEGAFPLAPSLDSVG 197
>gi|395005219|ref|ZP_10389111.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
gi|394316799|gb|EJE53500.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
Length = 444
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 186/412 (45%), Gaps = 39/412 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL ++KD+FD+ G T G+ A + AA +PAV + + GA+ IG+T M E
Sbjct: 60 PLAGLAVSVKDLFDIAGQATTAGSTALAGS-PAAQQDSPAVARLRAAGASLIGRTNMVEF 118
Query: 87 AYSINGENKHYGTPTNPCA-------PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
A+S G N H+GTP A RVPGGSSSG+AV+V LG+DTGGS+R
Sbjct: 119 AFSGVGVNPHFGTPAAWDARFGALPGEARVPGGSSSGAAVSVATGAAFVGLGSDTGGSIR 178
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+PA+ GI GF+ + V T G +P++ + DT + R R + + + ++
Sbjct: 179 IPAALNGIVGFKNTQRLVPTTGAVPLSTTLDTA-------CAMTRSVRDAILVHELLSAT 231
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
R ++ +L ++P+ G+ +V + F + G + D + L
Sbjct: 232 RVTRSPAPLAGYRL-AVPTTLFLDGMDATVARAFERTLATLRSAGARI-DTIA-----LP 284
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQ 319
E ++ Y A + LL K +H D V+ + G + WE +
Sbjct: 285 EAAQQPAYGFSPPEAYAWHRELL---AAKGDHYD--PRVRARIEKGATLAAWEYI----A 335
Query: 320 KIDVCQSVKTELRAAL---SALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL-- 374
+ + ++ + + AA+ ALL + PT+ P + D E FR L
Sbjct: 336 LVGMRRAWQERMHAAIDGYDALLSPTVPITAPTIASVAPGSERDE---EFFRVNTLLLRN 392
Query: 375 LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
S+ + C +S+P + LPV + + D +LN + L+E+
Sbjct: 393 TSLVNLLDGCALSLPCHVQGELPVGLMVWQGAMRDDGVLNASLQIEKALQEK 444
>gi|386397044|ref|ZP_10081822.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
gi|385737670|gb|EIG57866.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
Length = 468
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 198/429 (46%), Gaps = 41/429 (9%)
Query: 13 EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS 72
E+ P++ ++PL G+ F +KD DV G+ T G P++A A V +L
Sbjct: 64 EELASLPAAVRAKMPLYGVPFVVKDNIDVVGYDTTAGCPEYAYRPE---RNAFVVDRLLE 120
Query: 73 GGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGT 132
GA + K +D+ A + G YG P NP + D + GGSSSGS VA+ K FSLGT
Sbjct: 121 AGAILVAKANLDQFATGLTGMRSVYGFPQNPYSADHIVGGSSSGSGVAIACKTAHFSLGT 180
Query: 133 DTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL 192
DT GS R+PA + GI+GFRPS +S GV+P + D+ F P L R+++
Sbjct: 181 DTAGSGRIPAGFLGIYGFRPSGGVLSNTGVVPSGRMLDSCSVFCRWPDDL----RLVMSA 236
Query: 193 ADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP 252
A + P F+++ L D V G++ E+ F G + + +++
Sbjct: 237 AGVYDAADP----FSKEVLGRRKAFKDPVV-GIIDPKEEYFLGDAEAKRVYAAGI-ERLR 290
Query: 253 SLQHFLSEGNKEQEYSI------PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
L + + + + E I P L A +A +L + + G + VK L
Sbjct: 291 GLGYSIEQIDYEPFAEISDMTYKPELMAERAA--VLGPFIEAHPEGTYSPVVKAALVNST 348
Query: 307 SERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG--PPPKLQMDPSAL 364
R +A + ++ ++ + ++ + + +L +PT P +++ DP+
Sbjct: 349 DCRAVDAYKILHRRTELAREIELGTWSRVD-------MLALPTAPTIHKRSEVERDPA-- 399
Query: 365 EVFRARAFSL-LSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
+ + + L ++ A G +S+P G+ D LP + + + G DG L+++ ++
Sbjct: 400 --YASTSLGLFVNFAPHLGIPALSVPNGMRRDGLPSGLMFVGREGDDGLLVDIAQSF--- 454
Query: 423 LKEELQRMS 431
ELQ +S
Sbjct: 455 --AELQSVS 461
>gi|167573942|ref|ZP_02366816.1| indole acetimide hydrolase [Burkholderia oklahomensis C6786]
Length = 467
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 21/165 (12%)
Query: 21 SSAHQLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSA--------ATSTAPAVLAVL 71
+ +LPL+G+ F IKD +F D TH+A AT A V +L
Sbjct: 68 AGGRKLPLAGVPFVIKDNLFTAD-----------MPTHAASPALLGFNATRNATTVQQLL 116
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLG 131
GA +GK M E+A+ I N H+G NP P R+ GGSS G+A AV A + F LG
Sbjct: 117 DAGAVPLGKANMHELAFGITSANGHFGAVRNPHDPARIAGGSSGGTASAVAAG-IPFGLG 175
Query: 132 TDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
TDTGGSVR+PA++CG+ G RP+ ST GV+ ++ + DTVG A
Sbjct: 176 TDTGGSVRIPAAFCGVAGLRPTPRRYSTEGVLALSPTRDTVGTIA 220
>gi|260221605|emb|CBA30337.1| hypothetical protein Csp_C23040 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 623
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL G+ FAIKD D+ G T G PD+A +A V +L GA +IGKT +D+
Sbjct: 88 LPLWGIPFAIKDNIDLAGVPTTAGCPDYAYI---PEQSATVVQRLLDAGAIAIGKTNLDQ 144
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A +NG YG N P V GGSS+GSAV+V V FSLGTDT GS RVPA +
Sbjct: 145 FATGLNGSRSPYGACLNSHNPGFVSGGSSAGSAVSVALGQVSFSLGTDTAGSGRVPAGFN 204
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+ G +PS +ST GV+P ++ D V FA
Sbjct: 205 HLVGLKPSLGLLSTHGVVPACRTLDVVSIFA 235
>gi|171185088|ref|YP_001794007.1| amidase [Pyrobaculum neutrophilum V24Sta]
gi|170934300|gb|ACB39561.1| Amidase [Pyrobaculum neutrophilum V24Sta]
Length = 403
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 108/211 (51%), Gaps = 24/211 (11%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ A+KD +V G T G P + + TAP V +LS GA +GKT M E+A
Sbjct: 43 LCGVALAVKDNIEVAGMPTTNGAPYMKKM---SDRTAPVVKTLLSEGAVVVGKTNMHELA 99
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
N H+G NP P R+ GGSS GSA AV D +GTDTGGSVR+PA+ CG+
Sbjct: 100 LGATNVNPHFGPAKNPHDPGRITGGSSGGSAGAVAVGAADLGIGTDTGGSVRIPAALCGV 159
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFA--------------WDPKILNRVGR----VL 189
G++P + + T GV+P+AQS D VG+ A W P+ L R R VL
Sbjct: 160 VGYKPPYGKIPTEGVLPLAQSLDHVGFLARTVKELVDVLSAVGWAPRGLQRPKRFRFAVL 219
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDR 220
L +++ V + F L SI +R
Sbjct: 220 LGISEPTRYVEKA---FWRAVAALESIGGER 247
>gi|116695356|ref|YP_840932.1| amidotransferase subunit A [Ralstonia eutropha H16]
gi|113529855|emb|CAJ96202.1| amidotransferase subunit A [Ralstonia eutropha H16]
Length = 458
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 185/415 (44%), Gaps = 56/415 (13%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL GL A+KD+ D G T +G+ + AA A V ++ GA IGKT E
Sbjct: 64 PLEGLPIAVKDLIDTKGMETRYGSAAYLGHVPAAD--AEIVKTLVERGAIIIGKTTTHEF 121
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A+ + + +G NP R+PGGSS G+A A+ + +GTDTGGSVR+PA+ CG
Sbjct: 122 AWGVTTASARFGDTLNPLDHTRIPGGSSGGAAAAIAHGAIMAGVGTDTGGSVRIPAALCG 181
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ--- 203
+ G++P+ +ST GV P+A + D VG +V VLL LAD V++ P
Sbjct: 182 VVGYKPTLGTLSTRGVFPLAPTCDHVGLLG------EQVDDVLL-LADAVDIKVPESDAW 234
Query: 204 ------VIFAEDCLQLS---SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSL 254
VI + LS ++P D G +K + ++F + L D V S+
Sbjct: 235 LSARLGVIRDIAPVPLSPEIAVPFD----GAMKRLAQVFSCVNVSTSGLFDAVFGAFASI 290
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV 314
L EG E F+ N D ++T P +R+ A
Sbjct: 291 --VLIEGGIEH---------------------FRRNDWDRIST---HYNPETVDRLKRAE 324
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF----RAR 370
+ Q + + A L ++ LV+PT P P L ++ + R
Sbjct: 325 TMDLRAYAAAQQARRDFTARLHKVMSTVDYLVLPTCPCTAPHLDAGTVSIGAWTGTVREA 384
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ + V+GF +SIPL + +LP A+ ++AK G DG LL + + + L+
Sbjct: 385 LMTYTAPFNVAGFPAISIPLATGERSLPAALQIVAKPGDDGALLQIAQQMELMLR 439
>gi|302881723|ref|XP_003039772.1| hypothetical protein NECHADRAFT_72189 [Nectria haematococca mpVI
77-13-4]
gi|256720639|gb|EEU34059.1| hypothetical protein NECHADRAFT_72189 [Nectria haematococca mpVI
77-13-4]
Length = 621
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGN-PDWARTHSAATS-TAPAVLAVLSGGATSIGKTIMD 84
PL G+ +IKD +D DG+ T G+ D+A + TS T+ AV + GA IGK M
Sbjct: 186 PLDGIPSSIKDDYDYDGYATSLGSVNDYAEEAADGTSSTSWAVRKLEESGAIIIGKLHMH 245
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E G N H+GTP NP P GGSSSG A AV + ++ +LG+D GGS+R+PASY
Sbjct: 246 EYGLDTTGNNPHHGTPPNPYNPKYYTGGSSSGPAYAVSSGIIPLALGSDGGGSIRIPASY 305
Query: 145 CGIFGFRPSHSAVS 158
C +FG +P+H+ ++
Sbjct: 306 CSLFGLKPTHNRIT 319
>gi|390572286|ref|ZP_10252506.1| Amidase [Burkholderia terrae BS001]
gi|389935770|gb|EIM97678.1| Amidase [Burkholderia terrae BS001]
Length = 379
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 191/409 (46%), Gaps = 58/409 (14%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+ +F L +A G T AIKD DV G+ T G A + A V
Sbjct: 3 AFISEFTLSADPAAQ-----GPTIAIKDSIDVAGYPT-TGASRSLADAPPAAAHAEVVQR 56
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L G GKT M E+A+ + G N + GTP NP R+PGGSSSGSA AVGAKLVD +
Sbjct: 57 LLDAGWRITGKTNMHELAFGMTGINDYTGTPVNPQDAARIPGGSSSGSASAVGAKLVDAA 116
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDTGGS+R PA+ CG+ G +P+ VS G +P + D VG F D +
Sbjct: 117 LGTDTGGSIRGPAACCGVIGLKPTFGRVSRKGAVPRESTLDCVGPFTRD----------I 166
Query: 190 LQLADDVNLVRP------SQVIFAEDCLQLSSIPSD-RVTQGLVKSVEKL-FGGHIIENV 241
L D + + P ++ + A + + S+ +D + QG+ ++V+ F IE
Sbjct: 167 ATLVDAMAAIAPAFDTNAAKRVNASANVAIVSVDADAAIRQGVERAVQIAGFASRAIEL- 225
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
D++K+ + + L+ N E + L V T K
Sbjct: 226 ---DHLKE---AFEAGLAVINVETARAFAHL----------------------VETGK-- 255
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDP 361
LG + R+ A +T+ ++D + + AA+ L + +LV+PT+P P ++
Sbjct: 256 LGADVDARLRVAAQTTQAQLDAAEHARRAFTAAVDRALENADVLVLPTLPTLPITIEAAR 315
Query: 362 SALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDN-LPVAISLLAKHGSD 409
+ V SL+ +SG +S+P+ + + + + L+ + G+D
Sbjct: 316 NGTPVLTMS--SLIRPFNLSGHPALSLPIPIEGSPMKAGLQLVGRKGAD 362
>gi|148252308|ref|YP_001236893.1| amidase [Bradyrhizobium sp. BTAi1]
gi|146404481|gb|ABQ32987.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. BTAi1]
Length = 475
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 179/404 (44%), Gaps = 31/404 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV+G T G+ R + A A + + + GA +G M E
Sbjct: 74 PLAGVPFAVKNLFDVEGLPTRAGS-KINRDRAPAARDATLIARMEAAGAVLVGALNMGEY 132
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP P R+ GGSS GS AVG LV +LG+DT GS+RVP+S+CG
Sbjct: 133 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCG 192
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P S D +G FA + +D+ L +
Sbjct: 193 IFGLKPTYGRLSRARSFPFVMSLDHLGPFA--------------RSVEDLALAYDAMQGP 238
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVE----KLFGGHIIENVILGDYVKDKVPSLQHFLSEGN 262
D ++ P++ V+ L + ++ L GGH N+ + ++E
Sbjct: 239 DPDDAACTTRPAEPVSGLLSQELDGLRIGLAGGHFQTNLFPEAAEAVARVAAALKVTE-- 296
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
+P A +A ++ E + H D + T D P + +R+ A +D
Sbjct: 297 ---VIEVPEAARARAAAYVISTTEGASLHLDRLRTRPHDFDPAVRDRLIAGAMIPAPLVD 353
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRARAFSLLSI 377
Q + RA + L +L+ P P PKL +D L V I
Sbjct: 354 RAQKFRRWYRAKVLELFTSVDVLIAPATPCIAPKLGQATFMLDGVELPVRANIGIHTQPI 413
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
+ + G V++P+ L + +P+ + ++A + L + L
Sbjct: 414 SFI-GLPVVAVPIPL-EPMPIGVQIIAAPWCEHVALRVAHALQQ 455
>gi|377820136|ref|YP_004976507.1| amidase [Burkholderia sp. YI23]
gi|357934971|gb|AET88530.1| amidase [Burkholderia sp. YI23]
Length = 461
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 186/408 (45%), Gaps = 35/408 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +IKD+FD++G VT G+ A A V + GA +G+T M E
Sbjct: 74 PLAGIPVSIKDLFDIEGQVTRAGSKALADAPPARADAV-TVARLRRAGAVIVGRTNMSEF 132
Query: 87 AYSINGENKHYGTPTNPCAPD-------RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
A+S G N HYGTP +P D R+ GGSSSG+A +V + +LGTDTGGS+R
Sbjct: 133 AFSGLGLNPHYGTPRSPWRADPADDGDARIAGGSSSGAAASVADGMAAVALGTDTGGSIR 192
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+PA+ CG+ GF+P+ S + G +P++++ D+ G V R+L V
Sbjct: 193 IPAALCGLTGFKPTASRIPKQGGVPLSKTLDSFGPIGVSVACCALVDRILAGRDPGVPAT 252
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
RP D ++L + ++ VT G+ V + G V+D + L
Sbjct: 253 RPL------DGVRLGVL-TNYVTDGVETPVATAVAAAVNHLAAAGALVEDVRFAPLDRLP 305
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEA-VRTSA 318
E N+ Y + ++ A + +L+ HG D P + R+ A ++A
Sbjct: 306 EINR---YPLVAIEAYAWHRKLMA------EHGG-------DYDPRVLARLTRAEAASAA 349
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF-RARAFSLLSI 377
ID+C++ + A + L +V PTVP PP++ S + F R A L +
Sbjct: 350 DYIDLCEARAAMIEEARTTLWQRFDAIVCPTVPVLPPRIADLASDDDAFTRVNALILRNP 409
Query: 378 AGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+ C +S+P PV + L SD LL++ + L
Sbjct: 410 TAFNFLDACALSLPCHPRGAAPVGLMLAGAPHSDDALLSIGRAVEAVL 457
>gi|227823710|ref|YP_002827683.1| amidase [Sinorhizobium fredii NGR234]
gi|227342712|gb|ACP26930.1| putative Glu-tRNA amidotransferase [Sinorhizobium fredii NGR234]
Length = 435
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 180/404 (44%), Gaps = 30/404 (7%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G +IKD+FD+ G T G+ R A++ A V + + GA IGKT M E
Sbjct: 56 PLDGRIVSIKDLFDIAGEPTLAGS-IIRRMAPPASADATIVRRLRAAGAVIIGKTHMTEF 114
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G N HY P N P +PGGSSSG+ V+V D ++G+DTGGSVR+PA+ G
Sbjct: 115 AFTAVGLNPHYPVPGNAVDPMLIPGGSSSGAGVSVAEGTSDIAIGSDTGGSVRIPAALQG 174
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V G P++ S D++G A L +AD V+
Sbjct: 175 LVGFKPTARRVPLDGAFPLSPSLDSIGPLA-------------LSVAD---CALADAVMA 218
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ L+ +P D + G+ K V ++E + D K LQ G + E
Sbjct: 219 GDRPEPLTPLPVDGLKLGIPKGV-------LLEE-LAPDVAKAFEAGLQRLSRAGARLAE 270
Query: 267 YSIPSLAAL---SSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
I L A ++A+ L E H DW+ + + P + + + ++
Sbjct: 271 LEIDDLLARFAEATAIGSLAGLEASRIHADWLVDDEAPVDPRVKSPLRRRLAVPDTALEN 330
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDPSALEVFRARAFSLLSIAGVSG 382
+ L A+ L ++++PT P P ++ ++ E R L + +
Sbjct: 331 LLKTRHALARAMDGRLAPFDLVLLPTTPIPAVRIAAVEEDKREYRRIEGLLLRNTEVANQ 390
Query: 383 FCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
F +I L + LP + L+ ++G+D LL L + L+E
Sbjct: 391 FDLTAITLPMPGAALPAGLMLMGRNGTDRTLLRLAACVERLLQE 434
>gi|337266223|ref|YP_004610278.1| Amidase [Mesorhizobium opportunistum WSM2075]
gi|336026533|gb|AEH86184.1| Amidase [Mesorhizobium opportunistum WSM2075]
Length = 431
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 180/412 (43%), Gaps = 49/412 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G ++KD+FDV G T G+ +T A+ A V + GA IGKT M E
Sbjct: 52 PLDGTIVSVKDLFDVAGEPTTAGSL-MRKTAMPASRDAATVSRLRQAGAVIIGKTNMTEF 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G+N HYGTP N R+PGGSSSG+ V+VG + S+G+DTGGSVR+PAS G
Sbjct: 111 AFTAIGDNMHYGTPGNAVDASRIPGGSSSGAGVSVGEATSEISIGSDTGGSVRIPASLNG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V G P++ + D++G A R ++Q A V+
Sbjct: 171 VVGFKPTARRVPLTGAFPLSATLDSIGPLA----------RTVVQCAA------ADAVMA 214
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ- 265
+L+ IP + G+ + V+ GD + + +H L G EQ
Sbjct: 215 GNMPAELAPIPLSGLRIGIPR------------GVLFGDTESEVAAAFEHCL--GKIEQA 260
Query: 266 --EYSIPSLAALSSAMRLLQR------YEFKNNHGDWVTT-VKPDLGPGISERVWEAVRT 316
+ S+ L MR + E H DW+ T + P +S + A
Sbjct: 261 DARLADMSIDDLLGEMRAATKRGSIAAMEGAEIHADWLATGASVPVDPHVSGPLSRAAAI 320
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL- 375
+ L AA+ L +L +PT P P + E R LL
Sbjct: 321 PTPVYIRALRRRAALVAAMDERLTSFDVLALPTTPVTAPSIVSMAENAE-LRDHIEGLLL 379
Query: 376 ---SIAGVSGFCQVSIPL-GLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+A C +S+P+ G+ LP + L+A++G D LL + + L
Sbjct: 380 RNTQVANQFDLCAISLPMPGM--TLPAGLMLVARNGHDRRLLRIAAEVERLL 429
>gi|408377409|ref|ZP_11175010.1| allophanate hydrolase [Agrobacterium albertimagni AOL15]
gi|407748400|gb|EKF59915.1| allophanate hydrolase [Agrobacterium albertimagni AOL15]
Length = 600
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
+ PL G+ FA+KD +V G T PD+ AAT+ A V + + GA IGKT +
Sbjct: 64 QERPLYGIPFAVKDNINVAGMPTTCACPDF---EYAATADAFVVAKLKAAGALPIGKTNL 120
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
D+ A + G Y P N P VPGGSSSGSAVAV +V F+LGTDT GS RVPA+
Sbjct: 121 DQFATGLVGIRSPYTIPRNAIDPSIVPGGSSSGSAVAVARGIVPFALGTDTAGSGRVPAA 180
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
I G +P+ +S G++P ++ DT+ FA
Sbjct: 181 LNNIVGLKPTLGTLSATGMVPACRTLDTISIFA 213
>gi|365880052|ref|ZP_09419438.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 375]
gi|365291934|emb|CCD91969.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 375]
Length = 450
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 188/412 (45%), Gaps = 35/412 (8%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGK 80
++A P +G+ +IKD+FD+ G VT G+ + A AV + G IG+
Sbjct: 65 ANAAPSPYAGIPVSIKDLFDIKGQVTRAGSRALEDSAPADADAP-AVARLRKAGFVVIGR 123
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
T M E AYS G N HYGTP + D VPGGSSSG+AV+V ++ +LGTDTGGS
Sbjct: 124 TNMTEFAYSGIGINPHYGTPKSAWKRDVGYVPGGSSSGAAVSVVDRMAYGALGTDTGGSC 183
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNL 198
R+PA++ GI G++P+ S V G +P++ + D+ G A N V + D V
Sbjct: 184 RIPAAFNGITGYKPTQSRVPLDGGVPLSTTLDSFGPLA------NTVA--CCAVLDSVLA 235
Query: 199 VRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF 257
P + + A L ++P+ V L V + F +E + + +++ F
Sbjct: 236 DEPIRPLVARPVKGLRLAVPTTVVLDELDAEVAQTF-ERALETLARQGALIERI-EFPEF 293
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERV--WEAV 314
L G + + + Y + ++ T K D+ P +S R+ EA+
Sbjct: 294 LDVG----------IIGIKGGFAAAESYAWHR----FLLTAKGDVYDPRVSVRIARGEAI 339
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSL 374
T I++ + ++ ++ A +A + + LV+PT PPK+ R SL
Sbjct: 340 -TVPDYIEMLNARRSLVKRA-AARIAPYDALVMPTTANAPPKIADLADDAAFARENIRSL 397
Query: 375 LSIAGVSGF--CQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ ++ C +S+P H +PV + L D LL + + ++
Sbjct: 398 RNCTFINMIDGCAISLPAHRHGEVPVGLMLAQSGVQDRKLLEIAAGVEGVVR 449
>gi|404402418|ref|ZP_10994002.1| amidase [Pseudomonas fuscovaginae UPB0736]
Length = 374
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 192/405 (47%), Gaps = 59/405 (14%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP-------AVLAVLSGGATSIGKT 81
+G T +KD DV G VT R S A +TAP V A+L G + KT
Sbjct: 13 NGPTVMVKDTIDVAGLVT--------RASSQALNTAPPASAHAEVVQALLDKGCHLVAKT 64
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
+ E+A+ G N GT NP P R+PGGSSSGSA AV A L DF+LGTDTGGSVRVP
Sbjct: 65 SLHELAFGTTGINHWTGTAPNPRFPGRIPGGSSSGSAAAVAAGLADFTLGTDTGGSVRVP 124
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
A CG+FGF+P+ VS GV+P S D VG FA +L + A D
Sbjct: 125 ACCCGVFGFKPTFGRVSRRGVMPARSSLDCVGPFAASLPML-----ITAMQAIDATF--- 176
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG 261
Q + + +L + D +V++ +I+ V+ G G
Sbjct: 177 -QPVSVQQQPRLGVLTVDASA-----TVQR-----VIDAVVAG---------------SG 210
Query: 262 NKEQEYSIPSL-AALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
S+PS AA ++ M ++ R F + G + + + +G I+ R+ A T+A+
Sbjct: 211 LPTHSISLPSFDAAYAAGMVVINRETF-DACGHLLESGQ--VGADIASRLAAAGTTTAEA 267
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGV 380
+ + V+ + + A L +L++PT+P P ++ V F + +
Sbjct: 268 LANAEQVREQFTFEVDAALRQVDVLLLPTMPDFPLRIADAADTQAVLGMTRF--VRPFNL 325
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL----NLVETLHN 421
SG ++IPLG + LPV + L+ G+D +L +L+E L++
Sbjct: 326 SGHPALNIPLGSAEGLPVGLQLVGAKGADEQVLAIAGHLLERLYS 370
>gi|229579162|ref|YP_002837560.1| amidase [Sulfolobus islandicus Y.G.57.14]
gi|229582083|ref|YP_002840482.1| amidase [Sulfolobus islandicus Y.N.15.51]
gi|228009876|gb|ACP45638.1| Amidase [Sulfolobus islandicus Y.G.57.14]
gi|228012799|gb|ACP48560.1| Amidase [Sulfolobus islandicus Y.N.15.51]
Length = 397
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 180/426 (42%), Gaps = 45/426 (10%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+S Y AF+ ++ + L +TF IKD+ G T G+ + A
Sbjct: 7 NSKYNAFITLHNIEENDKGK---LKDVTFGIKDVILTKGIRTTAGS--RILENYVPQKNA 61
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V A+L G IGKT E A + G NP P+R+ GGSS GSAVAV
Sbjct: 62 YVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVNPERISGGSSGGSAVAVKLD 121
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP-KILN 183
++D +GTDTGGSVR+P+S CG+ GF+P+ + T GVIP + S DTVG D +L
Sbjct: 122 MIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLR 181
Query: 184 RVGRVLL-QLADDVNL----VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII 238
RV +L V + RP +F D +++S I L+K + +
Sbjct: 182 RVFDAILPNEKKKVEIAKLRTRPRLGLFLFDEMEVSRI--------LLKEIYAKLSSYF- 232
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
D V+ +P L+ + S+ + SLA SS H DW+T
Sbjct: 233 ------DIVEVDLPLLRQYGSKTRRTI-----SLAEASSY------------HKDWITEN 269
Query: 299 KPDLGPGISERVWEAVRTSAQK-IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ + ++ SA ID + + + + IL PT PK+
Sbjct: 270 SNKYFKDTYTLLLDGMKISATDYIDAIRYRRVLIEEYIKVFKNIDFILS-PTTKIVAPKI 328
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
S FR + + V G +SIP + LPV + + + DG LL + E
Sbjct: 329 SDVLSNPLQFREYLIANTELFNVVGAPSISIPFSTLNELPVGLMISGELYKDGDLLEVTE 388
Query: 418 TLHNTL 423
+ N +
Sbjct: 389 YILNVV 394
>gi|333916534|ref|YP_004490266.1| Amidase [Delftia sp. Cs1-4]
gi|333746734|gb|AEF91911.1| Amidase [Delftia sp. Cs1-4]
Length = 498
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 92/170 (54%), Gaps = 17/170 (10%)
Query: 19 PSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
P+ + QLPL+GL +KD + G G P A H AP+V +L+ GA +
Sbjct: 80 PADARAQLPLAGLPIVVKDNINTRGLPNTAGTP--ALEHFIPWDNAPSVQRLLNAGAIVL 137
Query: 79 GKTIMDEMAYSINGEN--KHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
GK M E+A+ I N H G NP P R+PGGSS G+A A+ A++V LGTDTGG
Sbjct: 138 GKANMHELAFGITSTNLAPHAGPVRNPYDPSRIPGGSSGGTAAAIAARIVPAGLGTDTGG 197
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAG----------VIPMAQSFDTVGWFA 176
S R+PA+ GI GFRPS V G V+P++ + DTVG A
Sbjct: 198 STRIPAALTGIAGFRPS---VGNGGASRRYHDPNAVVPISHTRDTVGPMA 244
>gi|126459486|ref|YP_001055764.1| amidase [Pyrobaculum calidifontis JCM 11548]
gi|126249207|gb|ABO08298.1| Amidase [Pyrobaculum calidifontis JCM 11548]
Length = 400
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL A+KD +V G G P R AT TAP V A+++ GA IGKT M E+A
Sbjct: 41 LCGLAVAVKDNIEVAGMPITNGAPYMRRV---ATETAPVVAALMAEGAVVIGKTNMHELA 97
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
N H+G NP P R+ GGSS GSA AV + D LGTDTGGSVR+PA+ CG+
Sbjct: 98 LGATNINPHFGPTRNPHDPTRITGGSSGGSAGAVAIGVADVGLGTDTGGSVRIPAALCGV 157
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 185
G++P + + T GV+P+AQS D VG L RV
Sbjct: 158 VGYKPPYGKLPTRGVLPLAQSLDHVGLITRSVDDLVRV 195
>gi|329113538|ref|ZP_08242319.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
gi|326697363|gb|EGE49023.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Acetobacter pomorum
DM001]
Length = 451
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 188/441 (42%), Gaps = 54/441 (12%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQL-----------PLSGLTFAIKDIFDVDGHVTGFG 49
+ ++D+D F + AH++ PL+G+ F +KD+FD+ GHVT G
Sbjct: 32 LRTQDNDIRCVTHIFADKALQQAHKIDAMRQAGQTLPPLAGVPFGVKDLFDIAGHVTTAG 91
Query: 50 NPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRV 109
+ R A A V + + GA + MDE AY N HYGT NP R+
Sbjct: 92 S-IVLRNTPPAQKDAAIVQRLKAAGAIPVATLNMDEFAYGFATVNAHYGTTHNPHDLARM 150
Query: 110 PGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSF 169
GGSS GSA AV A + F+LG+DT GS+R+PAS CG++G +P+ + AG P + S
Sbjct: 151 AGGSSGGSAAAVAAGFLPFALGSDTNGSIRIPASLCGVWGIKPTFGRLPRAGAYPFSASL 210
Query: 170 DTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSV 229
D VG FA L V+ D ++ P + D L++S +
Sbjct: 211 DVVGSFASSLDDLITTFYVM-----DGSIPAPEPAV---DTLRISRL------------- 249
Query: 230 EKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKN 289
GG N+ V +L + +P +A+ +A L+ E N
Sbjct: 250 ----GGWFASNL-----SPTLVTALNRVCASLKNSSTVELPEVASARAASFLITAAEGGN 300
Query: 290 NHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPT 349
H + + P +R+ + Q + R + + +L+ PT
Sbjct: 301 LHLSRLRKQAEEYDPATRDRLIAGALLPSSTYLQAQRFRNWFRQKIHEIFQKTDVLIAPT 360
Query: 350 VPGPPPKLQMDPSAL---EVFRARA----FSL-LSIAGVSGFCQVSIPLGLHDNLPVAIS 401
V G P L +P+ + + ARA F+ LS+ G+ C +PL +LP+ +
Sbjct: 361 VMGEAPLLD-EPTIMVDGKPVSARANLGLFTQPLSLPGLPVLC---LPLKNTGSLPLGLQ 416
Query: 402 LLAKHGSDGFLLNLVETLHNT 422
L+A G + L ++ L +
Sbjct: 417 LVAAPGQEAALFSVARALKKS 437
>gi|227827649|ref|YP_002829429.1| amidase [Sulfolobus islandicus M.14.25]
gi|229584853|ref|YP_002843355.1| amidase [Sulfolobus islandicus M.16.27]
gi|238619817|ref|YP_002914643.1| amidase [Sulfolobus islandicus M.16.4]
gi|385773319|ref|YP_005645885.1| amidase [Sulfolobus islandicus HVE10/4]
gi|385775951|ref|YP_005648519.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus REY15A]
gi|227459445|gb|ACP38131.1| Amidase [Sulfolobus islandicus M.14.25]
gi|228019903|gb|ACP55310.1| Amidase [Sulfolobus islandicus M.16.27]
gi|238380887|gb|ACR41975.1| Amidase [Sulfolobus islandicus M.16.4]
gi|323474699|gb|ADX85305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Sulfolobus
islandicus REY15A]
gi|323477433|gb|ADX82671.1| amidase [Sulfolobus islandicus HVE10/4]
Length = 397
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 180/426 (42%), Gaps = 45/426 (10%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+S Y AF+ ++ + L +TF IKD+ G T G+ + A
Sbjct: 7 NSKYNAFITLHNIEENDKGK---LKDVTFGIKDVILTKGIRTTAGS--RILENYVPQKNA 61
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V A+L G IGKT E A + G NP P+R+ GGSS GSAVAV
Sbjct: 62 YVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPIDPERISGGSSGGSAVAVKLD 121
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP-KILN 183
++D +GTDTGGSVR+P+S CG+ GF+P+ + T GVIP + S DTVG D +L
Sbjct: 122 MIDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLR 181
Query: 184 RVGRVLL-QLADDVNL----VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII 238
RV +L V + RP +F D +++S I L+K + +
Sbjct: 182 RVFDAILPNEKKKVEIAKLRTRPRLGLFLFDEMEVSRI--------LLKEIYAKLSSYF- 232
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
D V+ +P L+ + S+ + SLA SS H DW+T
Sbjct: 233 ------DIVEVDLPLLRQYGSKTRRTI-----SLAEASSY------------HKDWITEN 269
Query: 299 KPDLGPGISERVWEAVRTSAQK-IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ + ++ SA ID + + + + IL PT PK+
Sbjct: 270 SDKYFKDTYTLLLDGMKISATDYIDAIRYRRVLIEEYIKVFKNIDFILS-PTTKIVAPKI 328
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
S FR + + V G +SIP + LPV + + + DG LL + E
Sbjct: 329 SDVLSNPLQFREYLIANTELFNVVGAPSISIPFSTLNELPVGLMISGELYKDGDLLEVTE 388
Query: 418 TLHNTL 423
+ N +
Sbjct: 389 YILNVV 394
>gi|163855151|ref|YP_001629449.1| amidase [Bordetella petrii DSM 12804]
gi|163258879|emb|CAP41178.1| putative amidase [Bordetella petrii]
Length = 538
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 165/370 (44%), Gaps = 54/370 (14%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ IKD+FD G V G+G P R + A + A V + + GA +G M E
Sbjct: 128 PLHGMPVGIKDMFDRQGRVAGWGTP-LRRDSAPADADATVVARLRAAGAVVLGVQHMAEF 186
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A S G N YG NP RV GGSSSG+A++V A V ++G+DTGGSVR+PA+ CG
Sbjct: 187 AMSPTGWNASYGPGRNPWDTGRVSGGSSSGAAMSVAAGHVPLAIGSDTGGSVRLPAALCG 246
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G +P+ +S AG +P++ S D +G AW ++ R L AD + PS
Sbjct: 247 LTGLKPTQHRISVAGAMPLSPSLDCIGPLAWSAELCGHACRALAG-ADAAD---PS---- 298
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP---SLQHFLSEGNK 263
CL + + + + + L +V + +D P +++ L E +
Sbjct: 299 ---CLH-APVVAGQPPRRLRVAVPRW---------------RDDDPMSGAMRQALDEAVR 339
Query: 264 EQEYSIPSLAALSSAMRLLQR----------YEFKNNHGDWVTTVKPDLGPGISERVWEA 313
+ A++S LLQR E H W+ G + R+
Sbjct: 340 ALRDAGVECVAVASPYPLLQRAGQLASIVLAVEAAAMHQRWLRERADGYGRQVRRRIARG 399
Query: 314 VRTSAQKIDVCQSVKTE---LRAALSALLGDHGILVIPTVPGPPPK----LQMDPSALEV 366
+ +D C +++ LR L LG+ L++P P P+ L D LE
Sbjct: 400 LLVPG--VDYCNALRLRGPFLRRHLRETLGEADALLLPCTPDVAPRVDDTLGDDQGRLE- 456
Query: 367 FRARAFSLLS 376
R F+LLS
Sbjct: 457 ---REFALLS 463
>gi|148557083|ref|YP_001264665.1| amidase [Sphingomonas wittichii RW1]
gi|148502273|gb|ABQ70527.1| Amidase [Sphingomonas wittichii RW1]
Length = 377
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 183/404 (45%), Gaps = 60/404 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
+ G A+KD DV G TG G+ A T A + A V VL G +GKT+M E+A
Sbjct: 14 VRGPRVAVKDCIDVAGTRTGCGSRALAETEPA-SGHARVVRQVLDAGGHLVGKTVMHELA 72
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ + G N GTP NP P +PGGSSSGSA AV A D +LGTDTGGS+R+PA+ CGI
Sbjct: 73 FGVTGINHWAGTPANPAMPGHIPGGSSSGSAAAVAAGEADVALGTDTGGSIRMPAACCGI 132
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +PS V GV P A S D VG A + ++ + + L D ++ + F
Sbjct: 133 IGLKPSFGLVGRQGVHPAASSLDCVGPMA---RTMDDIIWTMEALVDGFHVPPSPHLRFG 189
Query: 208 E---DC-LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
DC +L+S+ + V + + +++ + + L ++ + H L+ G
Sbjct: 190 ALDVDCDSRLASMVAAAVPAAIPMTSQRMAEAY---DAGLSIISRETFAAFGHLLATGRV 246
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ + A L+ A R+ DW EAVR +
Sbjct: 247 GADVA----ARLADAARV----------DDWQLARA------------EAVRAA------ 274
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAF----SLLSIAG 379
R + LL ILV+PT+P PP+L++ RA+A SL+
Sbjct: 275 -------FRTEIDRLLQRVDILVLPTLPAFPPRLEL------AARAKALVTMTSLVRPFN 321
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
+SG +++P+ L + L+ +HG DG L + + L
Sbjct: 322 LSGHPALTLPVVAGPGLVAGLQLVGRHGEDGLLCAAGRRIEHAL 365
>gi|148274008|ref|YP_001223569.1| allophanate hydrolase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831938|emb|CAN02909.1| conserved hypothetical protein, putative amidase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 597
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 191/421 (45%), Gaps = 50/421 (11%)
Query: 13 EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLS 72
++ QP+ S LPL+G A+KD DV G T P A T APAV +
Sbjct: 60 DRIARQPAGS---LPLAGWLIAVKDNIDVAGMPTTAACPSAATTPE---DDAPAVARLRE 113
Query: 73 GGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGT 132
GA +GKT +D+ A + G YG + PDR+ GGSSSGSAVAV LVD +LGT
Sbjct: 114 AGALVLGKTNLDQFATGLVGTRSPYGAVRHATRPDRISGGSSSGSAVAVALGLVDVALGT 173
Query: 133 DTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL 192
DT GS RVPA+ G+ G +P+ V GV+P +S+DTV A D R V++
Sbjct: 174 DTAGSGRVPAALHGLVGIKPTLGLVPATGVVPACRSYDTVSVLAADLATAQRALAVMVGT 233
Query: 193 --ADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGL--------VKSVEKLF-GGHIIENV 241
AD + PS A + + +P+D L +VE++ G ++E +
Sbjct: 234 DPADPASRDWPSTTRLAPRGVPVIGVPADGDLAPLSPGARAAFAAAVERMRDSGAVVETI 293
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
LG +++ + L EG E R E G V PD
Sbjct: 294 DLGPFLRAAL-----LLYEGALVAE-----------------RCEAA---GASVLADAPD 328
Query: 302 LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALL---GD--HGI--LVIPTVPGPP 354
L P ++ V A+ A ++ +++ LR A A+ GD GI L++PT P
Sbjct: 329 LDPTVAGIVRAALGIPAHRLVEDRALLERLRVAACAVFDAPGDARRGIDALLLPTTTEHP 388
Query: 355 PKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
++ + V AR + + + C V++P G D P +SL+A +D +L+
Sbjct: 389 TLAEVAAEPVAV-NARLGTYTNFVNLFDLCAVAVPAGEADGSPFGVSLVAPAFADQVVLD 447
Query: 415 L 415
L
Sbjct: 448 L 448
>gi|68467733|ref|XP_722025.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
gi|46443972|gb|EAL03250.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
Length = 450
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 202/454 (44%), Gaps = 66/454 (14%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSAATSTAPA 66
+ + + V++P++S PLSG T+ +KD I G+ T ++ S S A
Sbjct: 21 WNSLISDLVVEPTNSTG--PLSGTTYIVKDNIATSHGYTTAA-----SKILSNYESPFNA 73
Query: 67 VLAVL--SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
++ L S G+ IGK+ +DE N ++ TNP +VPGGSS GSA +V K
Sbjct: 74 MIIDLLSSNGSKLIGKSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGK 133
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+ FS+GTDTGGSVR+PASYC +FGF+P++ +S GVIP AQ+ DTVG + I+ R
Sbjct: 134 MCSFSIGTDTGGSVRLPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKR 193
Query: 185 VGRVLLQLADDVNLVRPSQV-----IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE 239
V VL + D P +V ++ L + +P + V + L V + +
Sbjct: 194 VYDVLNKYDDKDPTCLPEEVRQKIPTTKKETLTI-GVPHEFVLKELSADVRESW------ 246
Query: 240 NVILGDYVKDKVPSLQHFLSEGN-KEQEYSIPSLAALSSAMRL--LQRY----------E 286
+Y K L H + + K + ++PS L++A L RY E
Sbjct: 247 -----EYALSKTCKLGHLVKPISIKTIKKALPSYYTLATAEAASNLSRYDGIRYGYNTNE 301
Query: 287 FKNNHGDWVTTVKPD-LGPGISERV----WEAVRTSAQKIDVCQSVKTELRAALSALLGD 341
N+ + + T + D G + R+ + S ++ EL A S++ +
Sbjct: 302 LVNSPIELIATNRSDGFGSEVQRRILLGNYTLSSDSGDHYLRATQIREELCAEFSSIFNN 361
Query: 342 HGILVIPTVPGPPPKLQMDPSAL-------EVFRARAFSLLSI---------AGVSGFCQ 385
+L+ L M P++ E A + L+ A ++G
Sbjct: 362 SHVLLQDEQSSDKVDLIMAPTSTSTAPTWDEFVSANEKNFLNSYVNDVLTVPASLAGIPA 421
Query: 386 VSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+S+P+ + I L+ + G D +L L + +
Sbjct: 422 ISVPVN-----GIGIQLMGQFGDDDLVLQLADQI 450
>gi|94984867|ref|YP_604231.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Deinococcus
geothermalis DSM 11300]
gi|166217666|sp|Q1J0C2.1|GATA_DEIGD RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|94555148|gb|ABF45062.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Deinococcus
geothermalis DSM 11300]
Length = 483
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
+ LPL+G+ +KD +V G T G+ A S +TA V + GA IGK
Sbjct: 61 AGETLPLAGVPIVVKDNLNVIGTRTTCGSRILANYVSPYDATA--VERLTGAGAVIIGKA 118
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE A + E+ +G NP +RVPGGSS GSAVAV A L +LG+DTGGSVR P
Sbjct: 119 NMDEFAMGSSTESSAWGPTLNPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQP 178
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
A++ GI+G +P++ VS G++ A S D +G FA
Sbjct: 179 AAFTGIYGLKPTYGRVSRYGLVAYASSLDQIGPFA 213
>gi|87120475|ref|ZP_01076369.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinomonas sp.
MED121]
gi|86164118|gb|EAQ65389.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Marinomonas sp.
MED121]
Length = 486
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 179/429 (41%), Gaps = 44/429 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A KD+F +G T + + ST A L GA +GKT MDE
Sbjct: 67 PLAGIPIAHKDLFCTNGIKTTCASKMLSNFVPPYESTVTAKLE--QAGAIMLGKTNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN H+G NP D VPGGSS GSAVAV A + + GTDTGGS+R PAS+CG
Sbjct: 125 AMGSSNENSHFGLVKNPWNTDLVPGGSSGGSAVAVAAGMAVATTGTDTGGSIRQPASFCG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P++ VS G+I A S D G A R L + + P
Sbjct: 185 ITGLKPTYGRVSRFGMIAYASSLDQAGPMA-------RSAEDCAHLMNAIAGFDPQDSTS 237
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
AE Q D+ GL + K + G +E + D ++ V + G K ++
Sbjct: 238 AEVETQDYLTNLDQPLTGLTIGLPKEYFGEGLEQGV-ADAIRQAVSEFEKL---GAKIKD 293
Query: 267 YSIPSLA---------ALSSAMRLLQRYE-FKNNH-----GDWVTTVKPDLGPGISERVW 311
S+P+L A S A L R++ + H D + G S+ V
Sbjct: 294 ISLPNLKLSIPAYYVIAPSEASSNLSRFDGVRYGHRCDEPKDLIDMYTRSRAEGFSKEVQ 353
Query: 312 EAVRTSAQKID---------VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---QM 359
+ + + Q ++ ++ L + +++ P P +
Sbjct: 354 KRIMVGTYALSEGYYDAYYLKAQRIRRLIKQDFVNALNEVDVIMGPVAPTTAFAIGSKTD 413
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
DP A+ + S+ ++G +SIP G + +PV + ++ + ++ LLN+
Sbjct: 414 DPVAMYLEDIYTLSV----NLAGIPAMSIPAGFSNKMPVGLQIMGDYFTEAKLLNIAHQF 469
Query: 420 HNTLKEELQ 428
LQ
Sbjct: 470 QQHTDWHLQ 478
>gi|72383822|ref|YP_293176.1| amidase [Ralstonia eutropha JMP134]
gi|72123165|gb|AAZ65319.1| Amidase [Ralstonia eutropha JMP134]
Length = 468
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 185/419 (44%), Gaps = 62/419 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L GL A+KD+ D G T +G+ A + A V ++ GA IGKT E A
Sbjct: 81 LEGLPIAVKDMIDTRGLETRYGSS--AYVGHVPDTDADVVRTLVDQGAIVIGKTTTHEFA 138
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ + ++ +G NP R PGGSS G+A A+ A V LGTDTGGSVR+PA+ CGI
Sbjct: 139 WGVTTSSEAFGDTLNPLDRSRTPGGSSGGAAAAIAAGAVAAGLGTDTGGSVRIPAALCGI 198
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVN-LVRPSQVIF 206
GF+P+ A+ST G+ P+A + D G +L Q DD+ L R S +
Sbjct: 199 AGFKPTLGALSTRGIFPLAPTLDHPG--------------LLGQGVDDITVLARASGIDI 244
Query: 207 AEDCLQLSS----------IPSD----RVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP 252
E LS+ +P D + V+ + LF ++ L D V D
Sbjct: 245 PESDAWLSARLGVLAYVPPVPPDTAVFSASAHAVRMLRTLFTCEYVDPADLFDGVYDAFA 304
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWE 312
++ L+EG+ E S R+ Y + T + DL +S R +
Sbjct: 305 AI--VLTEGSVEHFRR-------SDEARMAAHYSEE-------TRQRLDLAKAMSLRDYA 348
Query: 313 AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVF----R 368
Q + R L A++ + LV+PT PPKL + +++ + R
Sbjct: 349 R----------AQQTRHRFRHRLKAMMTELDYLVLPTCACLPPKLDANVASIGAWSGTVR 398
Query: 369 ARAFSLLSIAGVSGFCQVSIPL-GLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
+ + V+GF +SIPL LP A+ ++A G DG LL + + ++++
Sbjct: 399 QALMTYTAPFNVAGFPAISIPLWSAGCALPAAMQIVAHPGDDGALLKIAAEIERMVRDD 457
>gi|401763106|ref|YP_006578113.1| amidase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174640|gb|AFP69489.1| amidase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 465
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 176/409 (43%), Gaps = 38/409 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +A+K++FDV GH T G +++ +AAT + AV + S G G MD
Sbjct: 70 PLAGVPYAVKNLFDVAGHTTLAGAELFSQRPAAATDSF-AVRQLRSAGGLLTGMVNMDAY 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP R+ GGSS GSA AV A LV FSLGTDT GS+RVPAS CG
Sbjct: 129 AYGFTTENSHYGATHNPHDLTRIAGGSSGGSAAAVAAGLVHFSLGTDTNGSIRVPASLCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G +P+ +S +G P S D +G FA R + LA + ++
Sbjct: 189 IYGLKPTFGRLSRSGSHPFVASLDHIGPFA----------RRVCDLASVYDALQGRDT-- 236
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDY--------VKDKVPSLQHFL 258
D Q ++R + +E+ G + +LG Y +D V + L
Sbjct: 237 -RDGFQ-----AERSREETRPLLERGLDG--LRCAVLGGYFTTWCDTEARDAVARVAKSL 288
Query: 259 SEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
+ ++E P SA + E N + + P ER+ +
Sbjct: 289 ---DVQEELQFPDAGLARSAAFITSASEGGNQYLPALRREPERFEPHSRERLLAGAMIPS 345
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK-----LQMDPSALEVFRARAFS 373
Q + + R A +AL +L+ P P + ++++ L + RA
Sbjct: 346 AWYIQAQRFRAQARQAFNALFEQADVLIAPATPRSATRIGEQTMEINGQPLPI-RASMGM 404
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNT 422
L G ++PL +P+ + L+A ++ L + L +
Sbjct: 405 LTQPISFLGLPVTTVPLRTARGMPIGLQLIAAPFNEQACLRVARVLEES 453
>gi|456352215|dbj|BAM86660.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A [Agromonas
oligotrophica S58]
Length = 466
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 153/334 (45%), Gaps = 22/334 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV+G T G+ R A A + + + GA +G M E
Sbjct: 65 PLAGVPFAVKNLFDVEGLPTRAGS-KINRDRPPAARDATLIARMETAGAVLVGALNMGEY 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP P R+ GGSS GS AVG LV +LG+DT GS+RVP+S+CG
Sbjct: 124 AYDFTGENVHDGPSRNPHDPTRMSGGSSGGSGSAVGGGLVPLALGSDTNGSIRVPSSFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P S D +G FA + L LA D Q
Sbjct: 184 IFGLKPTYGRLSRARSFPFVASLDHLGPFARSVED--------LALAYDA-----MQGPD 230
Query: 207 AED--CLQLSSIP-SDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
+D C + P S ++QGL + GGH +++ + ++ +
Sbjct: 231 PDDGACTTRAPEPVSGLLSQGLDGLRIAVAGGHFQKHLF-----PEAAEAVTRVATALRA 285
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+ +P A +A ++ E + H D + T D P + +R+ A +D
Sbjct: 286 TEVVEVPEAARARAAAYVISTTEGASLHLDRLRTRPNDFDPAVRDRLIAGAMIPAPMVDR 345
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
Q + RA + L +L+ P P PKL
Sbjct: 346 AQKFRRWYRAQVLELFKSVDVLIAPATPCVAPKL 379
>gi|456356560|dbj|BAM91005.1| amidase [Agromonas oligotrophica S58]
Length = 450
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 21 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA-ATSTAPAVLAVLSGGATSIG 79
++A P +G+ ++KD+FD+ G VT G+ A SA A + AP V + G IG
Sbjct: 65 ANAAPSPFAGIPVSVKDLFDIKGQVTRAGS--RALEDSAPADADAPVVARLRRAGFVVIG 122
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
+T M E AYS G N HYGTP + D VPGGSSSG+AV+V ++ +LGTDTGGS
Sbjct: 123 RTNMTEFAYSGIGINPHYGTPKSAWKRDIGHVPGGSSSGAAVSVVDRMAYGALGTDTGGS 182
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
R+PA++ GI G++P+ + V G +P++ + D+ G A
Sbjct: 183 CRIPAAFNGIVGYKPTQARVPLDGGVPLSTTLDSFGPLA 221
>gi|387904813|ref|YP_006335151.1| Indoleacetamide hydrolase [Burkholderia sp. KJ006]
gi|387579705|gb|AFJ88420.1| Indoleacetamide hydrolase [Burkholderia sp. KJ006]
Length = 572
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTI 82
LPL+G+ F IKD D T +P + TH A T V +L GA +GK
Sbjct: 177 LPLAGVPFVIKDNLDTADLPTLGASPAVNGYRATHDALT-----VRRLLDAGAVPLGKAN 231
Query: 83 MDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPA 142
M E+A+ I N+ +G NP P R+ GGSS G+A V A + F LGTDTGGSVR+PA
Sbjct: 232 MHELAFGITSGNRQFGAVGNPHDPRRIAGGSSGGTAAVVAAG-IPFGLGTDTGGSVRIPA 290
Query: 143 SYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
++CG++G RPS S+ GV+ ++ + DTVG A
Sbjct: 291 AFCGVYGLRPSAQRYSSHGVLSLSHTRDTVGPIA 324
>gi|271501785|ref|YP_003334811.1| amidohydrolase, AtzE family [Dickeya dadantii Ech586]
gi|270345340|gb|ACZ78105.1| amidohydrolase, AtzE family [Dickeya dadantii Ech586]
Length = 470
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 167/389 (42%), Gaps = 37/389 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ +A+K++FDV G T G +++ + AT A AV + + GA G MD A
Sbjct: 71 LAGVPYAVKNLFDVAGETTLAGARLFSQ-RAPATQDAFAVRQLQAQGALLSGLLNMDAYA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP R+ GGSS GSA AV A LV+FSLG+DT GS+RVPAS CGI
Sbjct: 130 YGFTTENTHYGATCNPHDVTRIAGGSSGGSAAAVAAGLVNFSLGSDTNGSIRVPASLCGI 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
FG +P+ +S G P S D +G A + DD+ LV
Sbjct: 190 FGLKPTFGRLSRQGTQPFVGSLDHIGPLA--------------RSIDDLALV-------- 227
Query: 208 EDCLQLSSIPSDRVT--QGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG---- 261
D LQ P+DR Q L +V L + + +LG Y
Sbjct: 228 YDVLQ-GRDPADRFQADQSLRSTVPSLSETAPLRSRVLGGYFAQWCDEQAAAAVRQVADA 286
Query: 262 -NKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
N + E ++ + +A +L E N + + P ER+ A
Sbjct: 287 LNADSEVTLDNAVLARTAAFILSASEGGNQYLPALQATPEQFEPLSRERLLAGAMIPAAW 346
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPP-----PKLQMDPSALEVFRARAFSLL 375
Q + R + AL D +L+ P P P ++++ + L + RA L
Sbjct: 347 YVQAQRFRDHFRREVLALFNDTDLLIAPATPCPATPIGQETMRINHTDLPI-RASMGMLT 405
Query: 376 SIAGVSGFCQVSIPLGLHDNLPVAISLLA 404
G V++PL LP+ + L+A
Sbjct: 406 QPISFVGLPVVTVPLVTASGLPIGVQLIA 434
>gi|333918269|ref|YP_004491850.1| putative glutamyl-tRNA(Gln) amidotransferase [Amycolicicoccus
subflavus DQS3-9A1]
gi|333480490|gb|AEF39050.1| putative glutamyl-tRNA(Gln) amidotransferase [Amycolicicoccus
subflavus DQS3-9A1]
Length = 518
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 178/405 (43%), Gaps = 32/405 (7%)
Query: 26 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
LPL+G FA+KD DV G T P++A T +A V ++ GA +GK +D+
Sbjct: 5 LPLAGTVFAVKDNIDVAGLPTTAACPEFAYTPE---RSATGVQRLVDAGAIVLGKANLDQ 61
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
A + G YG N P+R+ GGSSSGSAVAV + DF+LGTDT GS RVPA+
Sbjct: 62 FATGLVGTRSPYGACRNAHHPERIAGGSSSGSAVAVALGIADFALGTDTAGSGRVPAALN 121
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA-----DDVNLVR 200
GI G + + + T GV+P S+D + FA P + + V RV+ +A D +
Sbjct: 122 GIVGIKATLGLIPTDGVVPACPSYDCLTAFA--PALADAV-RVMRTMAGPSPRDPASRPW 178
Query: 201 PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
P+ A +IPS + L + F +++ G V + FLS
Sbjct: 179 PTDARLAAPVTPHVAIPSQKDLTLLSHEARECFAAAVMQLEAAGARVSTI--EISPFLSA 236
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+ ++ + +RY + G++VT + +A + +
Sbjct: 237 ARLLYDGAL-----------VAERYA---SFGEFVTGGGVTADASVQRIAADAKHVTGAQ 282
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPGPP--PKLQMDPSALEVFRARAFSLLSIA 378
+ Q ++ ALL +++PT P P ++ DP + + L++
Sbjct: 283 LARDQQQLRAVKLQTQALLDGFDAMLLPTAPTHPTLAEVAADPLGVNAMMGTYTNFLNLL 342
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
++ V++P G D +S++ + D +++ + T+
Sbjct: 343 DMAA---VAVPAGEADGGLFGVSVVTRAFDDQAAIDIASAITGTV 384
>gi|433773088|ref|YP_007303555.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
gi|433665103|gb|AGB44179.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
Length = 443
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 188/413 (45%), Gaps = 37/413 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G +IKD+FDV G T G+ +T + A A V + GA IGKT M E
Sbjct: 52 PLDGTIVSIKDLFDVAGEPTTAGSL-MRKTAAPAQRDAAIVSRLRQAGAVVIGKTNMTEF 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G+N HYGTP N R+PGGSSSG+ V+VG D S+G+DTGGS+R+PA+ G
Sbjct: 111 AFTAIGDNMHYGTPGNAVDASRIPGGSSSGAGVSVGEGTSDISIGSDTGGSIRIPAALNG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V +G P++ + D+VG LA V++ + +
Sbjct: 171 VVGFKPTARRVPLSGTFPLSGTLDSVG-----------------PLARTVSICAAADAVM 213
Query: 207 A-EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A E +L +IP + G+ + V LFG E +Y K+ G
Sbjct: 214 AGEAPKELVAIPLAGLRIGIPRGV--LFGDTEGEVGSAFEYCLGKIE------QAGAHIT 265
Query: 266 EYSIPSLAA-LSSAMRL--LQRYEFKNNHGDWVTT-VKPDLGPGISERVWEAVRTSAQKI 321
+ SI + A L +A R + E H DW+ T + P +S + A
Sbjct: 266 DLSIDDMIADLRAATRRGSIAAMEGAEVHADWLATGASVPVDPHVSGPLSRAALLPTPVY 325
Query: 322 DVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLL----SI 377
+ L AA+ L +L +P P P + E R R LL +
Sbjct: 326 IRALRRRAALAAAMDERLASVDVLALPATPVTAPAIASMAEDAE-LRDRTEGLLLRNTQV 384
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEELQRM 430
A C +S+P+ +LP+ + L+A++G D LL + ++ L + QR+
Sbjct: 385 ANQFDLCAISLPMP-GPSLPMGLMLVARNGHDRHLLRIAVSVERLLGVDRQRV 436
>gi|307725904|ref|YP_003909117.1| Amidase [Burkholderia sp. CCGE1003]
gi|307586429|gb|ADN59826.1| Amidase [Burkholderia sp. CCGE1003]
Length = 380
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 181/401 (45%), Gaps = 42/401 (10%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+++F L + A T AIKD D+ G+ T + A AT A V
Sbjct: 3 AFLQEFDLVAHARA-----DAPTIAIKDSIDIAGYATTAASRALADA-PPATRHADVVQR 56
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L G GKT M E+A+ + G N GTP NP R+PGGSSSGSA AVG +LVD +
Sbjct: 57 LLDAGWRITGKTNMHELAFGMTGINDFCGTPRNPQDAARIPGGSSSGSASAVGLRLVDAA 116
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDTGGSVR PA+ CG+ G +P+ VS GV P + D VG FA D +
Sbjct: 117 LGTDTGGSVRGPAACCGVIGLKPTFGRVSREGVAPRITTLDCVGPFARD----------M 166
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
+ D + + PS Q + D L ++ + I N + V+
Sbjct: 167 NTIVDVMQAIDPS--------FQHNRARGD--AANLRIAMPDVEADDAIRNAVAAAVVRS 216
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
+ S L+ ++ LA +++ E G V + K LG I R
Sbjct: 217 GLSSRNVRLA---AMRDAFTAGLAVINA--------ETWRAFGHLVDSGK--LGADIEAR 263
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA 369
+ A T+A +D + ++ + ++L +LV+PT+P P ++ + V
Sbjct: 264 LRTAANTTASDLDSAERIRRAFTDEVDSVLQHADVLVLPTMPSVPITIEAARAGNSVIAM 323
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSD 409
SL+ +SG +++P+ + +L + ++ + G D
Sbjct: 324 S--SLIRPFNLSGHPALTLPVSIEGTSLKAGLQIVGRKGED 362
>gi|295701185|ref|YP_003610186.1| amidase [Burkholderia sp. CCGE1002]
gi|295441508|gb|ADG20675.1| Amidase [Burkholderia sp. CCGE1002]
Length = 447
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 180/416 (43%), Gaps = 20/416 (4%)
Query: 12 MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 71
++ +P+ PL G+ F++KD G G P AT A V +
Sbjct: 47 LDAHFARPNDVLKGAPLYGIPFSLKDNICASGFPVTAGTP--GMEGCIATRDAIIVRKLK 104
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLG 131
S GA GK M E+++ I N +GT NP AP + GGSS G A AV A +V ++G
Sbjct: 105 SLGAVVAGKNNMHELSFGITSVNPRWGTVGNPTAPGYLAGGSSGGCAAAVAAGIVPIAIG 164
Query: 132 TDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ 191
TDTGGSVR+PA++CGI GFRP+ S+AG+IP++++ D+ P +L R + L
Sbjct: 165 TDTGGSVRIPAAFCGIVGFRPTSGHWSSAGIIPVSRTKDS-------PGLLTRTAKDALM 217
Query: 192 LADDVNL-VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
+ + ++ RP C +P+ + L + V K H I +I + +
Sbjct: 218 IHELLSTGTRPPAKQIRTPCRI--GLPAS-MWSNLNEDVRK-HCWHAITRLIRAGF--EC 271
Query: 251 VPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERV 310
V +++ N+ ++IP R L + + N ++ + I
Sbjct: 272 VDLDDSAVADLNRIGTFTIPVYEFFMDFPRTLLSFGWANRINAIFDNIRDEAVRNIVHSN 331
Query: 311 WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGI--LVIPTVPGPPPKLQMDPSALEVFR 368
A SA LR + L G+ L PTVP P D E+F
Sbjct: 332 LSAQLISAADYSFAIQNVGLLRQQMKNLFTTQGVDFLAYPTVPCSVPHCS-DAGRPELF- 389
Query: 369 ARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+ +A + V++P+ LPV +SL A G D LL + ++ + L
Sbjct: 390 SEVIRNTDLASNAAMPSVTLPVAPDGALPVGLSLDAPRGQDRRLLTMATSVEDVLN 445
>gi|319781387|ref|YP_004140863.1| amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167275|gb|ADV10813.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 431
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 184/413 (44%), Gaps = 51/413 (12%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G +IKD+ DV G T G+ RT + A V + GA IGKT M E
Sbjct: 52 PLDGTIVSIKDLLDVAGEPTRAGSL-MLRTTAPPLRDAVIVSRLRQAGAVIIGKTNMTEF 110
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A++ G+N+H+GTP N R+PGGSSSG+ V+VG + S+G+DTGGS+R+PAS G
Sbjct: 111 AFTAIGDNQHFGTPGNAVDASRIPGGSSSGAGVSVGEGTSEISIGSDTGGSIRIPASLNG 170
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ GF+P+ V AG P++ + D++G A R + Q A
Sbjct: 171 VVGFKPTARRVPLAGAFPLSATLDSIGPLA----------RTVAQCA------------- 207
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI-IENVILGDYVKDKVPS-----LQHFLSE 260
A D + +P+ + L G I I +L + +D+V + L
Sbjct: 208 AADAVMAGEVPT-------ALTPIALAGLRIGIPRGVLFEETEDEVATAFDRCLGKIEQT 260
Query: 261 GNKEQEYSIPSLAA-LSSAMRL--LQRYEFKNNHGDWVTT-VKPDLGPGISERVWEAVRT 316
G + ++ SI L A L +A + + E H DW+ T + P +S + A
Sbjct: 261 GARIEDLSIDDLLADLRAATKRGSIAAMEGAEVHADWLATGASVPVDPHVSGPLSRAAML 320
Query: 317 SAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL--QMDPSALEVFRARAFSL 374
+T L AA+ L +L +PT P P + D + L R R L
Sbjct: 321 PTPVYIRAMRRRTALAAAMDERLSSVDVLALPTTPVTAPTIVSMSDDAGL---RDRTEGL 377
Query: 375 L----SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
L +A C +S+P+ LP + L+A++G D LL + + L
Sbjct: 378 LLRNTQVANQFDLCAISLPMP-GTQLPAGLMLVARNGHDQRLLRIAAEVEQLL 429
>gi|167566815|ref|ZP_02359731.1| pyrazinamidase/nicotinamidase [Burkholderia oklahomensis EO147]
Length = 375
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 168/386 (43%), Gaps = 47/386 (12%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G T AIKD D+ GH T + A A A V VL G GK M E+A+
Sbjct: 14 GPTIAIKDTIDIAGHRTTGASRALADAPPA-ERHAEVVERVLDAGWRIAGKANMHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N + GTP NP P R+PGGSSSGSA VG VD +LGTDTGGS+R PA+ CG+ G
Sbjct: 73 MTGINDYTGTPVNPQDPARIPGGSSSGSASLVGLGRVDAALGTDTGGSIRGPAACCGVIG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ VS GV P+ + D VG FA D L V L D
Sbjct: 133 LKPTFGRVSRRGVAPVDTTLDCVGPFARDVATLVAVMAALAPGFD--------------- 177
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYS- 268
+S+ S ++ V VE D +++ + + + +
Sbjct: 178 ----ASVASPQLAACRVAIVE-----------------TDSDAAIRAAVERAAGQADCAA 216
Query: 269 ----IPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+ LAA A + E G +V + K LG I R+ A T+A ++D
Sbjct: 217 TPLRLDDLAAAFDAGLAVINAETSRAFGRFVGSGK--LGADIDARLRVAATTTADQLDTA 274
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFC 384
+ V+ A + L +LV+PT+P P L V SL+ +SG
Sbjct: 275 ERVRARFTAQVDRALDTADVLVLPTLPALPITLDEARGGASVIAMS--SLIRPFNLSGHP 332
Query: 385 QVSIPLGLHDN-LPVAISLLAKHGSD 409
+S+PL L + L + ++ + G+D
Sbjct: 333 ALSLPLPLAGSPLKAGLQIVGRKGAD 358
>gi|389871093|ref|YP_006378512.1| amidase [Advenella kashmirensis WT001]
gi|388536342|gb|AFK61530.1| amidase [Advenella kashmirensis WT001]
Length = 461
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 191/400 (47%), Gaps = 40/400 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ IKD+ D++G +T G+ W S TA AV + + GA IGKT E A
Sbjct: 72 LDGIPLGIKDLCDIEGTITACGSRQWETRTS--NQTADAVHRLRAHGAVIIGKTHTVEFA 129
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+ G N GTP NP + RVPGGSSSGS VAV A LV +LGTDTGGSVR+PA+
Sbjct: 130 FGGWGTNALLGTPRNPWDRNLHRVPGGSSSGSGVAVAAGLVPGALGTDTGGSVRIPAALN 189
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV------ 199
GI G + + A++ GV P++++ D+VG + + ADD L+
Sbjct: 190 GITGLKTTVGAINADGVYPLSRTLDSVG--------------PMTRTADDAALLLQALTH 235
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSV-EKLFGGHIIENVILGDYVKDKVPSLQHFL 258
P Q + + L+ +D + + V + E +G + V LG +D V ++
Sbjct: 236 APGQTV--QSMTYLAQDNADDLARVRVCVLPEDDYGVQVQRAVRLGS--RDMVRMVEMAG 291
Query: 259 SEGNKEQ-EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTS 317
+ +E +S A+S +L+ ++ H D++ GP + +R+ S
Sbjct: 292 ATIVREAPPFSFEQ--AMSDCGKLIAAEGWR-VHKDYIQDPSQHFGPFVRDRLMAGKSIS 348
Query: 318 AQKIDVCQSVKTELRAALSALLGDHGILVIPTVP-GPPPKLQMDPSALEVFRARAFSLLS 376
+ +++A + + D L++PT P GP P Q+D S + F
Sbjct: 349 DMQYQDLLGAHLKVQAVWTQWMADKDALLLPTTPFGPIPLAQVDESGTPLGYFTRF---- 404
Query: 377 IAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNL 415
+ V+G C +++P G NLPV++ L K G + LL +
Sbjct: 405 VNWVNG-CALALPAGFDQTNLPVSVQLAGKAGDELMLLRI 443
>gi|397691701|ref|YP_006528955.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Melioribacter
roseus P3M]
gi|395813193|gb|AFN75942.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Melioribacter
roseus P3M]
Length = 476
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 197/430 (45%), Gaps = 60/430 (13%)
Query: 28 LSGLTFAIKDIFDVDGH-VTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
L+G+ +IKD+ + +T N + A TA AV ++ A IGKT DE
Sbjct: 67 LAGMVISIKDVLSIKNRPMTCSSN---ILKNYEAVYTATAVQKLIDEDAIIIGKTNCDEF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN +G NP +RVPGGSS GSAV+V A L D SLGTDTGGS+R PA++CG
Sbjct: 124 AMGSSNENSAFGIVRNPHDKERVPGGSSGGSAVSVAAGLCDASLGTDTGGSIRQPAAFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G +P++ VS G+ A SFDT+G FA L+ + +L L+ SQ I
Sbjct: 184 VYGLKPTYGRVSRYGLTAFASSFDTIGPFANS---LDDIALILSVLSGKDPKDSTSQDI- 239
Query: 207 AEDCLQLSSIPSDRVTQGLVK-----SVEKLFGGHIIE------NVILGDYVKDKVPSLQ 255
L + +++T G+ K S E I E N++ D + K SL
Sbjct: 240 ETPSFDLINDAREKITVGIPKEYLNPSSEGGLDPEIKEAVENQINLLKKDGYEVKEISLP 299
Query: 256 HFLSEGNKEQEYSIPSLAALSSAM--RLLQRY---------EFKNNHGDWVTTVKPD-LG 303
H EY+I + L++A L RY + NN D T + + G
Sbjct: 300 H--------TEYAIATYYILTTAEASSNLSRYDGAHYGYRSDKANNLFDMYTESRTEGFG 351
Query: 304 PGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
+ R+ ++A AQK V+ L+ I++ PT P
Sbjct: 352 EEVKRRIMLGTYVLSAGYYDAYYRKAQK------VRRLLKEDFDKAFDQVDIILTPTTPT 405
Query: 353 PPPKL-QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDG 410
K+ + L+++ + F+ + A ++G +++P+G + D +P+ + L+A H +
Sbjct: 406 VAFKIGEKSADPLQMYLSDIFT--TPANLAGIPGINVPIGKNSDGMPIGLQLMANHFEER 463
Query: 411 FLLNLVETLH 420
LL + L
Sbjct: 464 KLLRFAKRLE 473
>gi|289192270|ref|YP_003458211.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
sp. FS406-22]
gi|288938720|gb|ADC69475.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
sp. FS406-22]
Length = 434
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 186/419 (44%), Gaps = 53/419 (12%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ A + PL G +K +V+G+ + + A A + + G
Sbjct: 38 LEKDEKAKKKPLYGKLIVVKANINVEGYTISCASKTLE--NYIAPYDATVIEKIKENGGL 95
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG MDE A +GE +YG NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 96 IIGIANMDEFACGSSGETSYYGPTKNPRAKDRIPGGSSSGSAAAVAADLCDMALGSDTGG 155
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G L + A+D
Sbjct: 156 SIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGP--------------LTKTAEDA 201
Query: 197 NLVRPSQVIFAEDCLQLSSIPS----DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP 252
L+ + +I +D +++ + R +G V K F + + ++DK+
Sbjct: 202 LLL--TNIIKGKDLRDTTTVETKPFEKRDIKGFKVGVVKEFMD------VADEKIRDKIE 253
Query: 253 S-LQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD---LGPGISE 308
++ F G + E S + L+ EF + +T + D G I E
Sbjct: 254 KGIEVFKDLGCEIVELSYKYVDLALPTYYLINYVEF------FSSTRRYDGRRYGYKIEE 307
Query: 309 RVWEAVRTS-------AQKIDVCQSVKTELRA------ALSALLGDHGILVIPTVPGPPP 355
E V +QK + K LRA + ++ D I+V TVP P
Sbjct: 308 VCGEEVLRRIMIGSMISQKEYSGKYYKNALRARNLMKNEMIKIMKDVDIIVGATVPKLPH 367
Query: 356 KLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
KL + +E++ ++L A + G C +P G + +PV + + K D +L+
Sbjct: 368 KLGEKLTPMEMYSYDVLTVL--ANICGLCAGVVPCGDINGIPVGLQIQGKPFEDEKVLS 424
>gi|427422336|ref|ZP_18912519.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Leptolyngbya sp. PCC 7375]
gi|425758213|gb|EKU99067.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Leptolyngbya sp. PCC 7375]
Length = 467
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 175/402 (43%), Gaps = 60/402 (14%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD+ G VT G+ + +S AT A AV + + GA +G MDE
Sbjct: 72 PLAGVPFAVKNLFDIAGTVTLAGS-KINQANSPATQDATAVARLKAAGAILVGALNMDEY 130
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N+HYG NP R+ GGSS GSA AV A LV +LG+DT GS+RVPA+ CG
Sbjct: 131 AYGFVTVNEHYGATPNPHDLTRISGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCG 190
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF------------------AWDPKILNRVGRV 188
++G +P++ +S AG + S D +G F A DP NR +
Sbjct: 191 VYGLKPTYGRLSRAGAFLFSSSLDHIGPFGRSVADVANTFQVLQGPDARDPICTNR-PEI 249
Query: 189 LLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
+L L+ D +R +I +D +G+ +V +
Sbjct: 250 ILDLSGDRAGIR-------------IAIATDHFAKGMAPTVAQAL--------------- 281
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
DKV + N + +IP A +A L+ E H + T D +
Sbjct: 282 DKVATAL------NVTRTMTIPEAARARAAAYLITASEGSQLHLSRLQTQPQDFDSATCD 335
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPP-----KLQMDPSA 363
R + Q + R + L ++V PT P P P +++D
Sbjct: 336 RFLAGALIPSSWYIQAQRFRRWYRDQVRELFKTVDLIVAPTTPCPAPLIEQTTMELDGET 395
Query: 364 LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAK 405
+ V F ++ + G +S+P+ L LPV + L+A+
Sbjct: 396 VLVRPHLGFYTQPLSFI-GLPVLSVPVHLPGELPVGVQLIAR 436
>gi|221201235|ref|ZP_03574275.1| amidase family protein [Burkholderia multivorans CGD2M]
gi|221206311|ref|ZP_03579324.1| amidase family protein [Burkholderia multivorans CGD2]
gi|221213592|ref|ZP_03586566.1| amidase family protein [Burkholderia multivorans CGD1]
gi|421471664|ref|ZP_15919933.1| amidase [Burkholderia multivorans ATCC BAA-247]
gi|221166381|gb|EED98853.1| amidase family protein [Burkholderia multivorans CGD1]
gi|221173620|gb|EEE06054.1| amidase family protein [Burkholderia multivorans CGD2]
gi|221179085|gb|EEE11492.1| amidase family protein [Burkholderia multivorans CGD2M]
gi|400224968|gb|EJO55162.1| amidase [Burkholderia multivorans ATCC BAA-247]
Length = 458
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 182/431 (42%), Gaps = 78/431 (18%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAP-------AVLAVLSGGATSIG 79
PL+G+ +IKD+FDV G VT R S AP AV + GA +G
Sbjct: 73 PLAGIPVSIKDLFDVAGQVT--------RAGSRVLDDAPPARADAVAVARLRRAGAVLVG 124
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGS------SSGSAVAVGAKLVDFSLGTD 133
+T M E A+S G N H+GTP +P D VPG + SSG+A +V + +LGTD
Sbjct: 125 RTNMSEFAFSGLGLNPHFGTPASPYRRD-VPGDARIAGGSSSGAAASVADGMAAVALGTD 183
Query: 134 TGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLA 193
TGGS+R+PA+ CG+ GF+P+ S V T G +P++ + D+ G
Sbjct: 184 TGGSIRIPAALCGLTGFKPTASRVPTQGGVPLSTTLDSFG-------------------- 223
Query: 194 DDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG---DYVKDK 250
P V A C L DR+ GL SV +E V LG +YV D
Sbjct: 224 -------PIGVTVA--CCAL----VDRMLAGLEPSVP---AARPLEGVRLGVLTNYVTDG 267
Query: 251 V---------PSLQHFLSEGNKEQEYSIPSLAALSSAMRL-LQRYEFKNNHGDWVTTVKP 300
V +L+H + G E +L L R E H + +
Sbjct: 268 VDADVAAALDTALKHLEAAGAIVTEVRFSALDRLPDINRFGFSPIEAYAWHRPLLAEHRD 327
Query: 301 DLGPGISERVWEAV-RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK--- 356
P + R+ + T+A +D+ + + L A + LV PTVP PP+
Sbjct: 328 RYDPRVLTRILKGEPATAADYLDLLAARRAMLDEAAHTVWARFDALVAPTVPIVPPRIAE 387
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL- 415
L+ D +A A S C +S+P D PV + L A D LL +
Sbjct: 388 LETDDAAFTRTNALILRNPSAFNFLDACALSLPCHPRDGAPVGLMLAAAPHRDDALLAIG 447
Query: 416 --VETLHNTLK 424
VE + NT++
Sbjct: 448 QSVEAVLNTIR 458
>gi|425434498|ref|ZP_18814967.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9432]
gi|389676042|emb|CCH94914.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9432]
Length = 443
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 172/405 (42%), Gaps = 44/405 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD+ G VT G+ R H AA A A+ + + GA +G T MDE A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HY NP P R+ GGSS GSA AV A LV +LG+DT GSVRVPA+ CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P+ VS G+ S D G+F +D+V + +FA
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHPGFF-----------------SDNVADMAAIWSLFA 229
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK-----DKVPSLQHFLSEGN 262
++ L+ L G ++ + DY + + + ++
Sbjct: 230 KNNLK-----------------APLSGLEGVKIALADDYFQQGAELEVIEAVTAIAERLG 272
Query: 263 KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKID 322
Q+ +IP A +A ++ E N H + T D P +R +
Sbjct: 273 VSQKITIPETARARAAAYIITASEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYL 332
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIA 378
Q + R L + + I++ PT+P P L ++ ++ + R
Sbjct: 333 QAQRFRRWYRDRLREIFAEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPF 392
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L + L L
Sbjct: 393 SFIGLPALSLPIKRPSQLPLGLQIIAAPDREDLILRVARVLEEML 437
>gi|15669349|ref|NP_248154.1| aspartyl/glutamyl-tRNA amidotransferase subunit A
[Methanocaldococcus jannaschii DSM 2661]
gi|2492836|sp|Q58560.1|GATA_METJA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|1500015|gb|AAB99163.1| amidase [Methanocaldococcus jannaschii DSM 2661]
Length = 434
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 194/417 (46%), Gaps = 49/417 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ A + PL G +K +V+G+ + + A A + + G
Sbjct: 38 LEKDEKAKKKPLYGKIIVVKANINVEGYTISCASKTLE--NYIAPYDATVIEKIKENGGL 95
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG MDE A +GE ++G NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 96 IIGIANMDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVSADLCDMALGSDTGG 155
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G L + A+D
Sbjct: 156 SIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGP--------------LTKTAEDA 201
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD-YVKDKV-PSL 254
L+ + +I +D +++ + + K ++ G + E + + D ++DKV ++
Sbjct: 202 LLL--TNIIKGKDLRDTTTVETKPFEK---KDIKGFKVGVVKEFMDVADEKIRDKVEKAI 256
Query: 255 QHFLSEGNKEQE-------------YSIPSLAALSSAMRLLQR---YEFKNNHGDWVTTV 298
+ F G + E Y I + SS R R Y+ + G+ V
Sbjct: 257 EVFKDLGCEIVELSYKYVDLALPTYYLINYVEFFSSTRRYDGRRYGYKIEEVCGEEVLR- 315
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
+ +G IS++ + S + + +R + ++ D I+V TVP P KL
Sbjct: 316 RIMIGSMISQKEY-----SGKYYKNALKARNLMRNEMIKIMKDVDIIVGATVPKLPHKLG 370
Query: 359 MDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
+ +E++ ++ +L++ A + G C +P G + +PV + + K D +L+
Sbjct: 371 EKLTPMEMY---SYDVLTVPANICGLCAGVVPCGDINGIPVGLQIQGKPFEDEKVLS 424
>gi|256811327|ref|YP_003128696.1| aspartyl/glutamyl-tRNA amidotransferase subunit A
[Methanocaldococcus fervens AG86]
gi|256794527|gb|ACV25196.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
fervens AG86]
Length = 434
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 37/411 (9%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ A + PL G A+K +V+ + + + A A + + G
Sbjct: 38 LEKDEKAKKKPLYGKIIAVKANINVEDYTISCASKTLE--NYVAPYDATVIEKIKENGGL 95
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG MDE A +GE ++G NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 96 IIGIANMDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVAADLCDMALGSDTGG 155
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G L + A+D
Sbjct: 156 SIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGP--------------LTKTAEDA 201
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPS-LQ 255
L+ + VI +D +++ ++ + +K + +E + + ++DK+ + ++
Sbjct: 202 LLL--TNVIKGKDVRDTTTVETEEFVKRDIKGFKVGVVKEFME--VTDEKIRDKIENGIE 257
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEF-----KNNHGDWVTTVKPDLGPGISERV 310
F G + E S + L+ EF + + + ++ G + R+
Sbjct: 258 VFKDLGCEIVELSYKYIDLALPTYYLINYVEFFSATRRYDGRKYGYKIEEVCGEEVLRRI 317
Query: 311 WEAVRTSAQKIDVCQSVKTELRA------ALSALLGDHGILVIPTVPGPPPKLQMDPSAL 364
S QK + K L+A + ++ D I+V TVP P KL + +
Sbjct: 318 MIGSMIS-QKEYSGKYYKNALKARNLMKNEMIKIMKDVDIIVGATVPKLPHKLGEKLTPM 376
Query: 365 EVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
E++ ++ +L++ A + G C +P G + +PV + + K D +L+
Sbjct: 377 EMY---SYDVLTVPANICGLCAGVVPCGDINGIPVGLQIQGKPFEDEKVLS 424
>gi|84515677|ref|ZP_01003038.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Loktanella
vestfoldensis SKA53]
gi|84510119|gb|EAQ06575.1| Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A [Loktanella
vestfoldensis SKA53]
Length = 462
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 86/151 (56%), Gaps = 10/151 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNP-DWARTHSAATSTAPAVLAVLSGGATSIGKTIMDE 85
PL GL A+KDI D +G T G D R T A V + + GA +GKT+ E
Sbjct: 82 PLHGLPVALKDIIDTNGIPTENGTIIDKGRV---PTEDAVIVRKLKAAGAYVMGKTVTTE 138
Query: 86 MAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+AY G+ + NP PD PGGSS GSA AVGA +V ++GT TGGSV PA+YC
Sbjct: 139 LAYVAPGKTR------NPVNPDHTPGGSSQGSAAAVGAAMVPLAIGTQTGGSVIRPAAYC 192
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
G+ GF+PS + G++ + S DTVG FA
Sbjct: 193 GVVGFKPSFGMIPRTGILSQSPSLDTVGVFA 223
>gi|27376152|ref|NP_767681.1| amidase [Bradyrhizobium japonicum USDA 110]
gi|27349291|dbj|BAC46306.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA
110]
Length = 458
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 178/412 (43%), Gaps = 47/412 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FDV G T G+ R + A A + + + GA +G M E
Sbjct: 65 PLAGVPFAVKNLFDVAGLPTRAGS-KINRDLAPAKRDATLIERLEAAGAVLVGALNMGEY 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY GEN H G NP R+ GGSS GS AVG LV +LG+DT GS+RVP+S+CG
Sbjct: 124 AYDFTGENIHDGPSRNPHDTTRMSGGSSGGSGSAVGGALVPIALGSDTNGSIRVPSSFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
IFG +P++ +S A P SFD +G FA R + LA
Sbjct: 184 IFGLKPTYGRLSRARSFPFVASFDHLGPFA----------RTVTDLA------------L 221
Query: 207 AEDCLQ-LSSIPSDRVTQGLVKSVEKL-----------FGGHIIENVILGDYVKDKVPSL 254
A D +Q + + T+GL +V L GG+ +NV + V ++
Sbjct: 222 AYDAMQGPDAGDAACTTRGLEPTVPLLANPVSDLRIAIAGGYFQKNVF-----PEAVEAV 276
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV 314
Q +P A +A ++ E + H D + D P + +R+
Sbjct: 277 SRVAKALGATQIVEVPEAARARAAAYVISTTEGASLHLDRLRKRPNDFDPAVRDRLIAGA 336
Query: 315 RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL-----QMDPSALEVFRA 369
A +D Q + RA S + +L+ P P PKL +D L V
Sbjct: 337 MVPAPLVDRAQKFRRWYRAQFSEIFKSVDVLLAPATPCTAPKLGQVNFNLDGVELPVRAN 396
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
I+ + G V++P+ L + LP+ + ++A + L + TL
Sbjct: 397 IGIHTQPISFI-GLPVVAVPVPL-EPLPIGVQIIAAPWREDIALRVAHTLER 446
>gi|430375723|ref|ZP_19430126.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella
macacae 0408225]
gi|429540954|gb|ELA08982.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Moraxella
macacae 0408225]
Length = 503
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 195/432 (45%), Gaps = 45/432 (10%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
S +AH PL+G+ A KDIF+ G +T G+ A + A A V + G ++G
Sbjct: 65 SGNAH--PLTGIPIAHKDIFNTQGILTTCGSKMLA--NYVAPYDATIVTKCNNAGLVTLG 120
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT MDE A + E+ ++G NP A D VPGGSS GSA AV L + G+DTGGS+R
Sbjct: 121 KTSMDEFAMGSDNESSYFGAVHNPWALDYVPGGSSGGSAAAVAGGLAPLATGSDTGGSIR 180
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL-ADDVNL 198
PAS+CG+ G +P++ VS G+I A SFD G F + + ++ A D
Sbjct: 181 QPASFCGLTGIKPTYGRVSRFGMIAYASSFDQAGSFGKSAQDCAYLLEIMSGFDAKDSTC 240
Query: 199 VRPSQVIFAEDCLQLSSIPSDRVTQGLV-KSVEKLFGGHIIENVILGDYVKDKVP----- 252
V S + D S D ++GL K ++ L G + + G ++D V
Sbjct: 241 VNKSVPTWTADLANKSLASKDLTSKGLENKPLQGLRIG--VPSEYFGAGLQDDVKTVINQ 298
Query: 253 SLQHFLSEG---------NKEQEYSIPSLAALSSAMRLLQRY---------EFKNNHGDW 294
SLQ + G N E + L A + A L RY E + D
Sbjct: 299 SLQQYEQLGATLVDVHLTNPEITLAAYYLLAPAEASSNLSRYDGVRFGYRCENPTDLTDL 358
Query: 295 VTTVKPD-LGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHG-------ILV 346
T + + G + R+ + T A C + + + +L D ++
Sbjct: 359 YTRSRSEGFGAEVQRRIL--MGTYALSAGYCDAYYVKAQKVRRLILNDFNHAFDACDVIA 416
Query: 347 IPTVPGPPPKLQMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAK 405
PT P P K+ + E++ +++ +++AG+ +S P+G + LPV + L+ K
Sbjct: 417 TPTAPTPAYKIGASLTPSEIYMGDVYTIGVNLAGLPA---LSHPVGFVNGLPVGLQLIGK 473
Query: 406 HGSDGFLLNLVE 417
H ++ L +L +
Sbjct: 474 HWTESELFHLAD 485
>gi|182415392|ref|YP_001820458.1| amidase [Opitutus terrae PB90-1]
gi|177842606|gb|ACB76858.1| Amidase [Opitutus terrae PB90-1]
Length = 422
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 86/149 (57%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ F +KD+FDV G T G+ + V + GA GKT + E
Sbjct: 64 PLGGVPFFLKDLFDVVGQPTAAGSSFLPEVRPMPAHDSAIVEKMRQNGAVLAGKTQLHEF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY I GEN H G +P P R GGSSSGSA V A++ ++GTDTGGS+RVPA++CG
Sbjct: 124 AYGITGENPHRGDCEHPHFPGRTSGGSSSGSAALVAAEITPLAIGTDTGGSIRVPAAFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWF 175
++GFR + A +P+A SFDT GWF
Sbjct: 184 LYGFRQTPRDPLIADAVPLAPSFDTAGWF 212
>gi|288961290|ref|YP_003451629.1| amidase [Azospirillum sp. B510]
gi|288913598|dbj|BAI75085.1| amidase [Azospirillum sp. B510]
Length = 393
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 186/399 (46%), Gaps = 47/399 (11%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
+ S LP + T AIKD D+ G T G+ A AA V +L+ G +G
Sbjct: 22 NGSGGTLPTALPTVAIKDTIDIAGTPTRAGSRSLADAAPAAGHAE-VVGNLLASGWRIVG 80
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT M E+A+ G N+ GT NP P VPGGSSSGSA AV A L D ++GTDTGGSVR
Sbjct: 81 KTTMHELAFGTTGINRWAGTAPNPRFPAFVPGGSSSGSAAAVAAGLADAAIGTDTGGSVR 140
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
+PA+ CG+FG +P+ VS GV+P S D VG FA D +
Sbjct: 141 IPAACCGVFGLKPTFGRVSRHGVMPAETSLDCVGPFAAD-------------------MD 181
Query: 200 RPSQVIFAEDCLQLSSIPS-DRVTQGLV--KSVEKLFGGHIIENVILGDYVKDKVPSLQH 256
R S + A D +P+ D VT GL+ +S + GG + V+ V
Sbjct: 182 RLSACMAAID-PTFGPLPAIDGVTIGLLDPESAGDVDGG-------IAAAVRAAV----- 228
Query: 257 FLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDL-GPGISERVWEAVR 315
G+ + +LA + +A V+ L G ++ R+ A R
Sbjct: 229 ----GSSDLPVEPVALAGMRAAFEAGLSVINVETWAACAALVETGLVGEDVAVRLRNAAR 284
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL--QMDPSALEVFRARAFS 373
T+A+ + ++V+ A + ALL ++ +PT+ GPPP + D S L R +
Sbjct: 285 TTAEDLARAEAVRAAFTAEVDALLARVAVIALPTMAGPPPLVADAGDTSRL----VRMTT 340
Query: 374 LLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFL 412
L+ +SG ++IPL D P ++ L+A G+D L
Sbjct: 341 LVRPFNLSGHPAIAIPLAAVDGAPASLQLVAAKGADELL 379
>gi|68468052|ref|XP_721865.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
gi|74591701|sp|Q5AK64.1|GATA_CANAL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
mitochondrial; Short=Glu-AdT subunit A
gi|46443807|gb|EAL03086.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
Length = 450
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 10/200 (5%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSAATSTAPA 66
+ + + V++P++S PLSG T+ +KD I G+ T ++ S S A
Sbjct: 21 WNSLISDLVVEPTNSTG--PLSGTTYIVKDNIATSHGYTTAA-----SKILSNYESPFNA 73
Query: 67 VLAVL--SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
++ L S G+ IGK+ +DE N ++ TNP +VPGGSS GSA +V K
Sbjct: 74 MIIDLLSSNGSKLIGKSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGK 133
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+ FS+GTDTGGSVR+PASYC +FGF+P++ +S GVIP AQ+ DTVG + I+ R
Sbjct: 134 MCSFSIGTDTGGSVRLPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKR 193
Query: 185 VGRVLLQLADDVNLVRPSQV 204
V VL + D P +V
Sbjct: 194 VYDVLNKYDDKDPTCLPEEV 213
>gi|300864621|ref|ZP_07109479.1| amidase [Oscillatoria sp. PCC 6506]
gi|300337370|emb|CBN54627.1| amidase [Oscillatoria sp. PCC 6506]
Length = 463
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 174/402 (43%), Gaps = 26/402 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ FA+K++FD+ G VT + ATS A V + GA +G MDE
Sbjct: 73 PLAGVPFAVKNLFDIAG-VTTLAGAKINQETPPATSDATLVTRLKQAGAILVGAQNMDEY 131
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN HYG NP RV GGSS GSA AV LV SLG+DT GS+RVP++ CG
Sbjct: 132 AYGFVTENSHYGPTRNPHDTTRVAGGSSGGSAAAVAGGLVPLSLGSDTNGSIRVPSALCG 191
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNLVRPSQV 204
IFG +P++ +S AG P S D VG FA + + V +L AD V RP ++
Sbjct: 192 IFGLKPTYGRLSRAGAYPFVGSLDHVGPFARSVRDIAAVYDILQGSDPADPVCTNRPPEL 251
Query: 205 IFAEDCL-QLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
CL QLS R +GL +V + E + + +++ N
Sbjct: 252 -----CLPQLS-----RGIEGLRIAVADGYFAQGAE--------PEALAAVETVARALNC 293
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDV 323
+IP +A ++ E N H + + D P +R A
Sbjct: 294 TATVTIPEAHRARAAAFVITACEGANLHLANLRSRPQDFDPATRDRFLAGALIPATWYIQ 353
Query: 324 CQSVKTELRAALSALLGDHGILVIPTVP--GPPPKLQMDPSALE--VFRARAFSLLSIAG 379
Q + R + + + I++ P P PP L+ A E V R
Sbjct: 354 AQRFRQWYRDRVREIFQNVDIILAPATPICAPPIGLEKMTIAGEEVVIRPNLGIFTQPLS 413
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
G S+P+ + LP+ + ++A ++ +L + L +
Sbjct: 414 FIGLPIASVPIQRPNALPLGVQIIAAPYNEALILRVAAMLES 455
>gi|121607823|ref|YP_995630.1| amidase [Verminephrobacter eiseniae EF01-2]
gi|121552463|gb|ABM56612.1| Amidase [Verminephrobacter eiseniae EF01-2]
Length = 576
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 190/428 (44%), Gaps = 50/428 (11%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWA-RTHSAATSTAPAVL 68
A++E+F QP + PL+GL FAIKD D G T P++A R AT V
Sbjct: 11 AWIERFA-QPLAGRSTGPLAGLRFAIKDNIDALGWPTTAACPEFAYRPREHAT----VVR 65
Query: 69 AVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDF 128
+L GA+ +GKT +D+ A +NG YG N D V GGSSSGSA V VDF
Sbjct: 66 KLLDAGASLVGKTNLDQFACGLNGTRSPYGAVPNAFHADYVSGGSSSGSAYVVATGQVDF 125
Query: 129 SLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRV 188
+LGTDT GS RVPA I G +PS +S GV+P AQS D V FA + RV
Sbjct: 126 ALGTDTAGSGRVPAGLNNIVGIKPSRGLLSARGVVPAAQSVDCVSIFARTVAMAARV--- 182
Query: 189 LLQLADDVNLVRPSQVIFAEDCLQLSSIP-SDRVTQGLVKSVEKLFGGHIIENVILGDYV 247
LQ+A + P LQL+S P R GL +E FG +
Sbjct: 183 -LQVAQGPDAQDPY-----SRTLQLASQPFGHRFRFGLPDPLE-FFGDQAAQAAFAQAVQ 235
Query: 248 K-DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGI 306
+ + + L Q ++ +AL A R F + H D
Sbjct: 236 RLSAIGGVAVALDYRPLAQAAALLYESAL-VAERYAALRPFFDAHED------------- 281
Query: 307 SERVWEAVRTSAQK------IDVCQSVKTELRAALS---ALLGDHGILVIPTVPG--PPP 355
RV E VR+ + D+C + +T+L+A AL +L++PT P
Sbjct: 282 --RVMEPVRSIIARGRGFGAADLC-AAQTQLQACAQQARALWAGMDVLLVPTAPTHYTIA 338
Query: 356 KLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLN 414
+Q DP AL + + +++ + +++P + D LP I+L+ GSD L
Sbjct: 339 AMQADPVALNSHLGQYTNFVNLL---DYAAIAVPSSIRPDGLPFGITLIGPCGSDWPLAE 395
Query: 415 LVETLHNT 422
L + H+
Sbjct: 396 LGQRYHHA 403
>gi|89900773|ref|YP_523244.1| amidase [Rhodoferax ferrireducens T118]
gi|89345510|gb|ABD69713.1| Amidase [Rhodoferax ferrireducens T118]
Length = 469
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 188/413 (45%), Gaps = 44/413 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+GL +IKD+FDV G T G+ + + A +PAV + GA +G+T M E
Sbjct: 87 PLAGLAVSIKDLFDVAGQTTCAGSVVL-KDNPPAEQDSPAVARLRRAGAAFMGRTHMVEF 145
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
A+S G N H+GTP NPC+ D R+PGGSSSG+ V+V LG+DTGGS+R+PA+
Sbjct: 146 AFSGVGTNPHFGTPVNPCSTDVPRIPGGSSSGAGVSVATGAAFIGLGSDTGGSIRIPAAL 205
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
GI GF+ + V T G +P++ + DTV + +L Q + R S
Sbjct: 206 NGIVGFKSTARLVPTQGALPLSTTLDTVCAMTRSVRDAMLAHELLAQR----QVTRSSAP 261
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLF-----GGHIIENVILGDYVKDKVPSLQHFLS 259
+ A ++ D + + ++ ++ G +E V L + + LQ +
Sbjct: 262 LAAYRLAVARTLMQDELDDTVSRAWQRTLATLRRAGAQVEEVNLTE-----IGQLQSIQA 316
Query: 260 EGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA- 318
G SLAA S + R + N + P ++ R+ SA
Sbjct: 317 AG---------SLAAAES--YVWHRQLLERNAAAY--------DPRVASRIQRGASMSAY 357
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVP-GPPPKLQMDPS-ALEVFRARAFSLL- 375
I + + + + SAL G +L PTVP PP ++ P A + R +LL
Sbjct: 358 DYITLLRERQRWISQMASALQGFDAVLS-PTVPIVAPPMAELAPGLARDAAFLRVNALLL 416
Query: 376 ---SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
S+ + C +S+P D LPV + + A D +LN+ + L++
Sbjct: 417 RNPSVVNMLDGCALSLPCQTADELPVGLMVWAGALRDDTVLNIALQIERILQK 469
>gi|258514076|ref|YP_003190298.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Desulfotomaculum
acetoxidans DSM 771]
gi|257777781|gb|ACV61675.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Desulfotomaculum
acetoxidans DSM 771]
Length = 485
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 182/422 (43%), Gaps = 44/422 (10%)
Query: 27 PLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGG-ATSIGKTIMD 84
PLSG+ A+KD I D T H+ V+ L A +GKT MD
Sbjct: 70 PLSGIPVAVKDNICTKDVRTTCASKI----LHNFVPPYNATVMEKLEANQAVLLGKTNMD 125
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A + EN Y NP +RV GGSS GSA + A SLG+DTGGS+R PA+
Sbjct: 126 EFAMGSSTENSAYFVTKNPWNIERVTGGSSGGSAAVIAAGEAVCSLGSDTGGSIRQPAAL 185
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLVR 200
CG+ G +P++ AVS G++ A S D +G F D +LN + + + +
Sbjct: 186 CGVVGMKPTYGAVSRYGLVAFASSLDQIGPFTRDVADCAIMLNAICGYDPKDSTSAKVGV 245
Query: 201 PSQVIF-AEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL 258
P F D L +P + + +G+ V K I + + LG V++ V L H
Sbjct: 246 PDYTSFLINDVKGLKIGVPKEYMAEGIEPEVRKAIEAAIEKFIELGAEVEETV--LPH-- 301
Query: 259 SEGNKEQEYSIPSLAALSSA-----------MRLLQRYEFKNNHGD-WVTTVKPDLGPGI 306
+Y++P+ ++ A +R R E N D ++ T G +
Sbjct: 302 ------TDYALPTYYIIAPAEASSNLARYDGVRYGHRTEEPENIVDMFMRTRSEGFGEEV 355
Query: 307 SERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPPPKL--QM 359
R+ SA D V+T + L + +L+ PT P K+ ++
Sbjct: 356 KRRIMLGTYALSAGYYDAYYLKALKVRTLIMQDLERAFAKYDVLLSPTTPSVAFKMGEKI 415
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
D S ++++ + +L A ++G +S+P G NLPV + L+ K +G LL T
Sbjct: 416 D-SPIQMYLSDICTL--SANLAGIPAMSLPAGFVGNLPVGMQLMGKPFDEGMLLRFAYTF 472
Query: 420 HN 421
Sbjct: 473 EQ 474
>gi|121999140|ref|YP_001003927.1| allophanate hydrolase [Halorhodospira halophila SL1]
gi|121590545|gb|ABM63125.1| Amidase [Halorhodospira halophila SL1]
Length = 596
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Query: 25 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
+LPL G+ FAIKD D+ G T G PD+A T ++A V ++ GA +GKT +D
Sbjct: 62 ELPLYGVPFAIKDNIDLAGVPTTAGCPDYAYTPE---TSAFVVQRLIDAGAVPVGKTNLD 118
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
+ A + G YG N D + GGSSSGSA+A V F+LGTDT GS RVPA++
Sbjct: 119 QFATGLVGTRSPYGACPNAFHRDYIAGGSSSGSALATALGQVPFALGTDTAGSGRVPAAF 178
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+ G +P+ +ST GV+P +S DTV FA
Sbjct: 179 NNLIGLKPTCGRLSTRGVVPACRSLDTVSIFA 210
>gi|440683839|ref|YP_007158634.1| amidohydrolase, AtzE family [Anabaena cylindrica PCC 7122]
gi|428680958|gb|AFZ59724.1| amidohydrolase, AtzE family [Anabaena cylindrica PCC 7122]
Length = 458
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 173/416 (41%), Gaps = 58/416 (13%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L G+ FA+K++FD+ G T G+ A + AT A A+ + GA +G MDE A
Sbjct: 67 LCGVPFAVKNLFDIAGLTTLAGSKINAE-NPPATEDATAITRLKKSGAVLVGALNMDEYA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYGT NP RV GGSS GSA AV LV +LG+DT GS+RVPA+ CG+
Sbjct: 126 YGFVTENAHYGTTHNPHDLQRVAGGSSGGSAAAVAGGLVPLTLGSDTNGSIRVPAALCGV 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAW------------------DPKILNR-VGRV 188
FGF+P++ +S AGV + S D +G FA DP R R
Sbjct: 186 FGFKPTYGRLSRAGVKLFSSSLDHIGHFATSVRDIATIFDVLQGEDGKDPICTKRPAERS 245
Query: 189 LLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
LLQ+ +D++ +R + A+D +S P
Sbjct: 246 LLQINNDISHLR---IAIADDYFTQNSTP------------------------------- 271
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISE 308
+ + ++Q N Q +IP +A ++ E N H + + + D +
Sbjct: 272 EALAAVQKVAKALNITQYVNIPEADIARAAAFVITACEGANLHLEKLKSRPQDFDVATRD 331
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE--- 365
R Q + R + + + I++ PT P P + L+
Sbjct: 332 RFLAGALIPGSWYIQAQRFRRWYRDQIREIFQNLDIIIAPTTPITSPLIGQQTMILDSEE 391
Query: 366 -VFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
+ R G +S+P+ ++LP+ + L+A ++ +L + L
Sbjct: 392 ILVRPHLGLFTQPLSFIGLPVLSVPIQNQNSLPLGVQLIAAPDNEVLILQIAAVLE 447
>gi|339485824|ref|YP_004700352.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Pseudomonas
putida S16]
gi|338836667|gb|AEJ11472.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Pseudomonas putida S16]
Length = 475
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 91/160 (56%), Gaps = 8/160 (5%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
Q +S H PL G+ AIKD+F++DG G+ A+ + TA AV + GA
Sbjct: 65 QRASGIHLGPLHGIPLAIKDLFEIDGQAITGGSV--AQQPRVSRVTATAVQRLERAGAII 122
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDR----VPGGSSSGSAVAVGAKLVDFSLGTD 133
+GKT E A+ G N GTP NP DR PGGSSSGSAVAV + L +LGTD
Sbjct: 123 LGKTHTVEFAFGGWGTNAVMGTPWNPW--DRNVHHAPGGSSSGSAVAVASGLASAALGTD 180
Query: 134 TGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVG 173
TGGSVR+PA CG+ G + + +S G+I + S D+VG
Sbjct: 181 TGGSVRIPAGMCGLVGLKTTRGLISRHGLIELCPSLDSVG 220
>gi|399067086|ref|ZP_10748729.1| amidohydrolase, AtzE family [Novosphingobium sp. AP12]
gi|398027245|gb|EJL20801.1| amidohydrolase, AtzE family [Novosphingobium sp. AP12]
Length = 452
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 177/399 (44%), Gaps = 42/399 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ + +KD+FD+ G T G+ +A A AV + + GA + MDE
Sbjct: 66 PLAGVPYGVKDLFDLAGLPTTAGSTLYADAAPALADAE-AVARLKAAGAVVVATLNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY N YGT NP R+ GGSS GSA V A L+ F+LG+DT GS+RVPAS G
Sbjct: 125 AYGFATINAAYGTTRNPHDIARLAGGSSGGSAAVVAAGLLPFALGSDTNGSIRVPASLTG 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G +P++ + AGV P A+SFD +G F + +D+ LV QV+
Sbjct: 185 VYGLKPTNRDLPLAGVFPFAESFDDIGPFT--------------RSVEDMELV--WQVLA 228
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
+ P R+ + GG EN D++ ++ ++ G E
Sbjct: 229 GREVAPTGKAP--RLAR---------LGGRFRENAD-----ADQLAAIDA-IAPGAPLVE 271
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+P +A SA L+ YE H + + P + +R+ Q+
Sbjct: 272 --LPEIARARSAAFLITAYEGGTLHREALAADAMAFDPQVRDRLLAGALLPDALYAEAQA 329
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPP-----PKLQMDPSALEVFRARAFSLLSIAGVS 381
+ E RA + AL+ D+ +L+ P P P++++D A+ RA +
Sbjct: 330 FRAEYRARIEALVADYDVLLAPATPTTAPLVEDPRIEID-GAMSAARADLGIHTQPISFT 388
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
G +++PL LP+ + L+ G + L TL
Sbjct: 389 GLPSLAVPLYRPGKLPIGLQLIGGPGREADLFAFAATLE 427
>gi|393765714|ref|ZP_10354275.1| amidase [Methylobacterium sp. GXF4]
gi|392728950|gb|EIZ86254.1| amidase [Methylobacterium sp. GXF4]
Length = 463
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ +KD+ D++G +T G+ A A TA +++ G +GKT E
Sbjct: 73 PLHGVPVVLKDLIDLEGRITMGGSA--AHRARRAERTATIARRLIAQGMIVLGKTHTVEF 130
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AY G N+H GTP NP P+ R PGGSSSG+ VAV A++ + +GTDTGGSVR+PAS+
Sbjct: 131 AYGGWGTNQHLGTPWNPWDPETQRTPGGSSSGTGVAVAARMAPWGIGTDTGGSVRLPASF 190
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
CG+ G + + VST G++P++ + DT G A
Sbjct: 191 CGLTGLKVTVGRVSTWGIVPLSTTLDTPGPLA 222
>gi|374705054|ref|ZP_09711924.1| Amidase [Pseudomonas sp. S9]
Length = 380
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
GL AIKD D+ G T G+ + AT A V A+L+ G +GKT M E+A+
Sbjct: 14 GLRVAIKDSIDIAGQPTRAGSRALENV-TPATRHAAVVEAILAAGWHIVGKTNMHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N GT NP AP RVPGGSSSGSA AVGA LVD +LGTDTGGSVRVPA+ CG+FG
Sbjct: 73 VTGINSWTGTALNPQAPSRVPGGSSSGSAAAVGAGLVDVALGTDTGGSVRVPAACCGVFG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFA 176
+P + VS GV P + D VG FA
Sbjct: 133 LKPKFAMVSREGVYPALTTLDCVGPFA 159
>gi|349687022|ref|ZP_08898164.1| amidase [Gluconacetobacter oboediens 174Bp2]
Length = 457
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 169/400 (42%), Gaps = 38/400 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ F +KD+FDV G VT G+ R + AT A V + + GA + MDE
Sbjct: 73 PLAGVPFGVKDLFDVRGEVTTAGS-IVLRDNLPATRDAEVVERLRAAGAVPVATLNMDEF 131
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY + EN H GT NP P R+ GGSS GSA +V A L+ F+LG+DT GS+RVP+S CG
Sbjct: 132 AYGFSTENAHTGTTRNPHDPARLAGGSSGGSAASVAAGLLPFTLGSDTNGSIRVPSSLCG 191
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
++G +P++ + GV P S D VG +AD V +R I
Sbjct: 192 VWGLKPTYGQMPLRGVYPFVASLDVVG-----------------PMADTVEDLRAVYGIM 234
Query: 207 AEDC-LQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A + + RV + GG EN+ + + ++ ++
Sbjct: 235 AGGLHMGEPDVGDVRVAR---------LGGWFAENI-----SPELAAGIDRVMAHLGHDR 280
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+P +A ++ L+ E N H + P R+ A Q
Sbjct: 281 VIELPEVARARASAFLISAAEGGNLHLPRLRRRAMQYDPATRGRLMAGAMLPAATFVQAQ 340
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI----AGVS 381
+ R + A L + +LV PT G P++ + A + L I ++
Sbjct: 341 RFRRWFRGHVHAALANADVLVAPTTVGVAPRIDQPSITVNGRTVSARANLGIFTQPISLA 400
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
G ++ PL + D LP I L+ G + L + L
Sbjct: 401 GLPVLAAPLAV-DGLPQGIQLIGAPGGEAKLFAVAAELQR 439
>gi|384221023|ref|YP_005612189.1| hypothetical protein BJ6T_73540 [Bradyrhizobium japonicum USDA 6]
gi|354959922|dbj|BAL12601.1| hypothetical protein BJ6T_73540 [Bradyrhizobium japonicum USDA 6]
Length = 488
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 192/422 (45%), Gaps = 43/422 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G+ +KD + G T G A H A AV A+ GA GK + EM
Sbjct: 84 PLLGVPLGVKDSYLTKGLPTSLGVEGLA--HFVPREDADAVRAIKGAGALVFGKNNLVEM 141
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
+Y + G N YG NP A DRV GGSSSGSA +V A LV SLG DT GS+RVPAS+CG
Sbjct: 142 SYGLTGHNARYGQVKNPHARDRVSGGSSSGSAASVAAGLVPASLGGDTVGSIRVPASFCG 201
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW---DPKILNRV--GRVLLQLADDVNLVRP 201
+ GF+P+ GV P++ + DT G FA D ++++V G + +D ++
Sbjct: 202 VVGFKPTTGRWPRRGVAPISHTLDTTGVFARSVEDCILVDQVVTGEQAAESSDGGYGLKG 261
Query: 202 SQVIFA-EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
+++ FA L+L + + +V+ ++ G I+E V LGD V
Sbjct: 262 ARLAFAPRQFLELVDSEVETRFREVVRRLQDA-GAEIVE-VDLGDDFNSLV--------- 310
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAV------ 314
+ + I + + L+R++ +KP L + W +
Sbjct: 311 --QTATWGIFAHETMGEISEFLRRHDIPTTFEAIYEGLKPQL-----RQAWGHIVLPGGA 363
Query: 315 -RTSAQKIDVCQSV-KTELRAALSALLGDHGILVI--PTVPGPPPKLQMDPS----ALEV 366
TSA+ V + E++ L+ HG LVI PT P P ++ + EV
Sbjct: 364 GATSAEAYQTALDVSRPEIQRRLNTAFVSHGALVILQPTTPRTAPLIEEQATVHIAGQEV 423
Query: 367 FR-ARAFSLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
A A LS + V G VS+P+GL LP+ + L A GSD LLNL + L
Sbjct: 424 SDLALANHTLSASSV-GLPGVSLPVGLSRAGLPIGLELDAPLGSDRGLLNLARGIERILG 482
Query: 425 EE 426
E
Sbjct: 483 AE 484
>gi|332797954|ref|YP_004459454.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidianus
hospitalis W1]
gi|332695689|gb|AEE95156.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Acidianus
hospitalis W1]
Length = 393
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 179/419 (42%), Gaps = 41/419 (9%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAAT 61
+S Y AF+ + + L GLTF IKDI G T G+ D+ +A
Sbjct: 7 NSKYDAFI---TIDEIKGRDKGKLKGLTFGIKDIILTKGIKTTAGSKILKDYIPNRNAWI 63
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
V +L G T +GKT E A + G NP P+R+ GGSS GSAVAV
Sbjct: 64 -----VDKILEEGGTIVGKTNTHEFAIGATNTSSIAGPARNPYDPERISGGSSGGSAVAV 118
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
K+VD +GTDTGGS+R+PAS CG+ GF+P+ + GVIP + + DT+G+ D
Sbjct: 119 ALKMVDVGVGTDTGGSIRIPASLCGVIGFKPTTGIIPIDGVIPFSWTLDTIGFITRDIPT 178
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
L RV ++ + + LV + P+ + ++ + F
Sbjct: 179 LRRVLDAVIPIENKHVLVSKVRTRPRLGVFLFKDDPASNSLKSILNKLSSYF-------- 230
Query: 242 ILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD 301
D + ++ L+ F S ++ AL+ E + H DW+ +
Sbjct: 231 ---DLIDLRLNFLEGFGS--------NVRGTIALA---------EGSSYHRDWIESTPGM 270
Query: 302 LGPGISERVWEAVRTSA-QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
P + E + + ++ A ID ++ + + A I + PT P PK+
Sbjct: 271 YFPDVKELLMQGLQIRAIDYIDALRARRVIFEEYVRAFDSVDAI-ISPTTKIPAPKISEV 329
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ +R S + + +S+P+ ++LP+ + + DG +L++ E +
Sbjct: 330 VGREKEYRKLLVSNTELFNLVNAPSISLPVSKVNDLPIGLMVSGLPYEDGIILDIAEKI 388
>gi|365969874|ref|YP_004951435.1| glutamyl-tRNA(Gln) amidotransferase subunit A 2 [Enterobacter
cloacae EcWSU1]
gi|365748787|gb|AEW73014.1| Glutamyl-tRNA(Gln) amidotransferase subunit A 2 [Enterobacter
cloacae EcWSU1]
Length = 465
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 171/400 (42%), Gaps = 24/400 (6%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +A+K++FDV GH T G +++ AT+ + AV + S G G MD
Sbjct: 70 PLAGIPYAVKNLFDVAGHTTLAGAELFSQ-RPPATADSFAVRQLRSAGGLLSGMVNMDAY 128
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
AY EN +YG NP R+ GGSS GSA AV A LV FSLGTDT GS+RVPAS CG
Sbjct: 129 AYGFTTENSYYGATRNPHDVTRIAGGSSGGSAAAVAAGLVHFSLGTDTNGSIRVPASLCG 188
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I+G +P+ +S AG P S D +G FA RV L + D + S
Sbjct: 189 IYGLKPTFGRLSRAGSHPFVASLDHIGPFA------RRVSD-LASVYDALQGRDTSDGFQ 241
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
AE + + DR GL +V GG+ + ++D V + L + ++
Sbjct: 242 AESSREQTRPLLDRGLDGLRCAV---LGGYF--STWCDSDMRDAVARVAKAL---DVQET 293
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
P SA ++ E N + + P ER+ + Q
Sbjct: 294 LQFPDAELARSAAFIISASEGGNQYLPALRREPGRFEPHSRERLLAGAMIPSAWYIQAQR 353
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEV------FRARAFSLLSIAGV 380
+T+ R A AL +L+ P P Q+ +E+ RA L
Sbjct: 354 FRTQARQAFKALFAQADVLIAPATPR--CATQIGEEIMEINGQPLPVRASMGMLTQPISF 411
Query: 381 SGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
G ++PL PV + L+A ++ L + L
Sbjct: 412 LGLPVTTVPLRTAQGAPVGLQLIAAPFNEQACLRVARVLE 451
>gi|319792155|ref|YP_004153795.1| amidase [Variovorax paradoxus EPS]
gi|315594618|gb|ADU35684.1| Amidase [Variovorax paradoxus EPS]
Length = 449
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 164/393 (41%), Gaps = 42/393 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL ++KD++DV G T G+ A A AV + + GA +GKT M E A
Sbjct: 71 LAGLPVSVKDLYDVAGETTMAGSA-VCEGEPPAARDAVAVARLRTQGAAIVGKTNMTEFA 129
Query: 88 YSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYC 145
+S G N HYGTP NP R+PGGSSSG+AV+V L LG+DTGGS+R+PA+ C
Sbjct: 130 FSGVGINPHYGTPHNPADAGMPRIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAALC 189
Query: 146 GIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVI 205
G+ GF+ + S V G +A+S DTV A
Sbjct: 190 GLVGFKSTQSRVPRTGAFELARSLDTVCAMARS--------------------------- 222
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVP-----SLQHFLSE 260
EDCL + +D +V+ + ++ D ++ V S+Q +
Sbjct: 223 -VEDCLVADAAIAD--VPLVVRRRPLRGLRLAVPRTLMFDSIETPVARAFERSVQALSAA 279
Query: 261 GNKEQEYSIPSLAALSS--AMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA 318
G + + ++ LA ++S A E H + + ++ R+ A
Sbjct: 280 GAEVVDITLAELAEIASINAPGGFSPIEASAVHRERFAAKREGFDSRVAARIALGTEVRA 339
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIA 378
V Q + + + L L+ PTVP P + F+A L +
Sbjct: 340 ADYIVMQDHRRDWIGRVGHALEGFDALICPTVPIIAPPIASLAEDAAFFQANGLLLRNTF 399
Query: 379 GVSGF--CQVSIPLGLHDNLPVAISLLAKHGSD 409
++ C S+P D LPV + L + G D
Sbjct: 400 AINFLDGCAFSLPCHAPDELPVGLMLSSVRGDD 432
>gi|329296928|ref|ZP_08254264.1| amidase [Plautia stali symbiont]
Length = 465
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 164/384 (42%), Gaps = 26/384 (6%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ +A+K++FDV GH T G ++ A A AV + GA G MD A
Sbjct: 71 LAGIPYAVKNLFDVAGHSTLAGASLFSE-RPVAQQDAWAVSKLQQSGALLSGMLNMDAYA 129
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HYG NP RV GGSS GSA AV A LV FSLGTDT GS+RVPAS CGI
Sbjct: 130 YGFTTENTHYGATRNPRDLSRVAGGSSGGSAAAVAAGLVHFSLGTDTNGSIRVPASLCGI 189
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL--QLADDVNLVRPSQVI 205
FG +P+ +S +G P S D +G FA + L+ V L +D RP++++
Sbjct: 190 FGLKPTFGRLSRSGSHPFVASLDHIGPFARSVEDLSLVYDALQGGDASDAFQAARPAELV 249
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK-VPSLQHFLSEGNKE 264
SDR++ G K + GG D+ D ++ S
Sbjct: 250 ------------SDRLSAGSEKLRSAVLGG------FFADWCSDDARAAVAVAASALGAA 291
Query: 265 QEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVC 324
+E ++P SA ++ E N++ + T P ER+ A
Sbjct: 292 EEVTLPQDELARSAAFIMTAAEGGNHYLPALRTQPERFEPNSRERLLAGAMLPAAWYVQA 351
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGV 380
Q + + + L + +L+ P P L + + RA L
Sbjct: 352 QRFRRHFQQQVLPLFDHYDVLIAPATPCTATTLGQETIHINGQDLPTRASMGMLTQPISF 411
Query: 381 SGFCQVSIPLGLHDNLPVAISLLA 404
G S+PL LP+ + L+A
Sbjct: 412 LGLPVCSVPLLTASGLPIGLQLIA 435
>gi|338973624|ref|ZP_08628987.1| amidase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233219|gb|EGP08346.1| amidase [Bradyrhizobiaceae bacterium SG-6C]
Length = 471
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 183/411 (44%), Gaps = 31/411 (7%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
SS PL+G+ FA+K++FDV G T G+ R + ++ A + + + GA +G
Sbjct: 71 SSGGRAGPLAGVPFAVKNLFDVSGVSTRAGS-KINRDLAPSSRDAALIDRIEAAGAVLVG 129
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
M E AY GEN H G NP R+ GGSS GS AVG LV +LG+DT GS+R
Sbjct: 130 ALNMGEYAYDFTGENAHDGPSRNPHDLTRMSGGSSGGSGSAVGGGLVPLALGSDTNGSIR 189
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
VP+S+CGIFG +P++ +S A P SFD +G FA + L LA DV
Sbjct: 190 VPSSFCGIFGLKPTYGRLSRARTFPFVASFDHLGPFARSTRD--------LALAYDV--- 238
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKL----FGGHIIENVILGDYVKDKVPSLQ 255
Q A+D + P + T L + ++ L GG+ EN L + V +
Sbjct: 239 --MQGPDADDP-ACADRPIEATTPSLARGIDGLRIAVAGGYFKEN--LTPEAMEAVARVA 293
Query: 256 HFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVR 315
LS E IP A +A ++ E + H D + T D P + +R+
Sbjct: 294 KALS---VTAEVEIPEAARARAAAFVITTSEAASLHLDRLRTRPQDFDPAVRDRLIAGAM 350
Query: 316 TSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ-----MDPSALEVFRAR 370
+ +D Q + R + L +++ P P PK+ +D L V
Sbjct: 351 VPSVFVDRAQKFRRWYREQVLELFKSVDVILAPATPCIAPKIGQATFVLDGVELPVRPNI 410
Query: 371 AFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
I+ + G V++P+ L D +PV + ++A + L + L
Sbjct: 411 GIHTQPISFI-GLPVVAVPVPL-DPMPVGVQVIAAPWREDVALRVAYALEQ 459
>gi|414157981|ref|ZP_11414275.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sp.
F0441]
gi|410870526|gb|EKS18483.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Streptococcus sp.
F0441]
Length = 488
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 186/434 (42%), Gaps = 54/434 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSG+ A+KD DG +T + +TA V + G +GKT MDE A
Sbjct: 69 LSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATA--VANAKTKGMIVVGKTNMDEFA 126
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+GE +YG N +VPGGSSSGSAVAV + V SLG+DTGGS+R PA++ G+
Sbjct: 127 MGGSGETSYYGATKNAWDHSKVPGGSSSGSAVAVASGQVRLSLGSDTGGSIRQPAAFNGV 186
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLVRPSQ 203
G +P++ VS G+I S D +G FA K +LN + ++D +
Sbjct: 187 VGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIA------SEDAKDSTSAP 240
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
V A+ S I D +G+ ++ K + G I+ + +K + +HF G
Sbjct: 241 VRIADFT---SKIGHD--IKGMKIALPKEYLGEGIDPEVKETIIK----AAKHFEKLGAI 291
Query: 264 EQEYSIPS---------LAALSSAMRLLQRY----------EFKNNHGDWVTTVKPDLGP 304
+E S+P + A S A LQR+ + N +V + G
Sbjct: 292 VEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDASNLDEIYVNSRSQGFGE 351
Query: 305 GISERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPP---PK 356
+ R+ + S+ D V+T + + D+ +++ PT P
Sbjct: 352 EVKRRIMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAYDLDS 411
Query: 357 LQMDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
L DP A+ + LL+I ++G +SIP G LPV + L+ S+ + +
Sbjct: 412 LNHDPVAMYL-----ADLLTIPVNLAGLPGISIPAGFSQGLPVGLQLIGPKYSEETIYQV 466
Query: 416 VETLHNTLKEELQR 429
T Q+
Sbjct: 467 AAAFEATTDYHKQQ 480
>gi|311103247|ref|YP_003976100.1| amidase [Achromobacter xylosoxidans A8]
gi|310757936|gb|ADP13385.1| amidase family protein 1 [Achromobacter xylosoxidans A8]
Length = 449
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 168/413 (40%), Gaps = 35/413 (8%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ +K FDV G T G+ AA A V A+ GA + + M E
Sbjct: 60 PLAGMVLGVKACFDVRGWTTHAGS-QVLADAPAARRDAALVQALRRAGAVLLAQNNMTEF 118
Query: 87 AYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
AY G N +GTP +P D RV GGSSSG AVAV +V +L +DT GS R+PA++
Sbjct: 119 AYGALGLNARFGTPLSPLMADVPRVAGGSSSGGAVAVAQGMVSLALASDTSGSARIPAAF 178
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
CG+ GF+PS AG++ ++ +FD G A D V +VL D + P
Sbjct: 179 CGVAGFKPSRGRYEDAGMMYLSPTFDVPGIIAADAAQCLLVDKVLAPW--DAAMPAPG-- 234
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLF--GGHIIENVILGDYVKDKVPSLQHFLSEGN 262
QG K+F H+ E+++ + + L+ + G
Sbjct: 235 -----------------VQGATPLASKVFVVPDHV-EDLLEPEVRRAFAAWLECLMDAGA 276
Query: 263 KEQEYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK 320
+ S+P LA R + + H + P + R+ + A
Sbjct: 277 ALRRESMPCLALAGKVARDGGIIAADAYALHASCLAADAARYDPRVGPRMLLGAQVPAHA 336
Query: 321 IDVCQSVKTELRAALSALLGDHGILVIPTVPG-PPPKLQMDPSALEVFR-ARAFSLLSIA 378
Q +LR + ++ PTVP PPP Q+D + RAFSL A
Sbjct: 337 YIAAQRRLADLRREYDRAIAGADAVLTPTVPMLPPPVAQLDDDDSYLRENGRAFSLTEFA 396
Query: 379 GVSGFCQVSIPLGLHDNLPVAISLLAK--HGSDGFLLNLVETLHNTLKEELQR 429
+SIP H A+ L+A G D LL + + L +R
Sbjct: 397 NRLDLPSISIP--GHRAAKQAVGLMATGLRGGDRALLLAAAQIEDALGSASRR 447
>gi|421853481|ref|ZP_16286153.1| amidase [Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
gi|371478286|dbj|GAB31356.1| amidase [Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
Length = 453
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 194/432 (44%), Gaps = 59/432 (13%)
Query: 12 MEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVL 71
M+K Q + + P++GL ++KD+FD G T G+ A A+ APA+ +
Sbjct: 59 MDKLRCQGQAPS---PVAGLPISVKDLFDEVGSTTRAGSMVLADA-PPASMDAPAIARLK 114
Query: 72 SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPD--RVPGGSSSGSAVAVGAKLVDFS 129
G SIG+T M E A+S G N H+GTP NP D R+PGGSSSG+AV+V +
Sbjct: 115 QAGLISIGRTTMTEFAFSGIGINPHFGTPANPWRRDEKRIPGGSSSGAAVSVSDNMAFVG 174
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
+G+DTGGS R+PA+ G+ GF+P+ +ST G +P++ + D++G +GR
Sbjct: 175 IGSDTGGSCRIPAALTGLVGFKPTARRISTQGTVPLSSTLDSIG----------SIGRT- 223
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
V + + A +++ P+ R GH + IL V +
Sbjct: 224 ------VACCWAADSLMATGTVRIQDAPTGR-------------DGHTLRLGILSTSVME 264
Query: 250 KVPS---------LQHFLSEGNKEQEYSIPSLAALSSAMRL--LQRYEFKNNHGDWVTTV 298
+ + L G + ++ P L + A E H + T
Sbjct: 265 DMDNTVAHTWEGCLGRLSRNGVILETFTCPPLTEIPKANSKGGFPAAESFAWHQHLLETR 324
Query: 299 KPDLGPGISERVWEAV-RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ P + +R+ +T+ I + QS +R A + ++ + +++PTVP PK+
Sbjct: 325 RSVYDPFVLQRILRGYEQTAVDYIALLQSRAKLIRQA-ADIMNHYDAVILPTVPIIAPKI 383
Query: 358 Q-MDPSALEVFRARAFSLL-----SIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGF 411
M+ +A R A +LL +IA C +S+P PV + ++ +H D
Sbjct: 384 NDMNDNA----RYVATNLLLLRNTTIANFLDLCAISLPCHHAGEAPVGLMVMGRHAEDCD 439
Query: 412 LLNLVETLHNTL 423
L ++ L L
Sbjct: 440 LFHIAAQLERIL 451
>gi|424779211|ref|ZP_18206142.1| amidase [Alcaligenes sp. HPC1271]
gi|422885936|gb|EKU28369.1| amidase [Alcaligenes sp. HPC1271]
Length = 388
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 180/395 (45%), Gaps = 52/395 (13%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSA--ATSTAPAVLAVLSGGATSIGKTIMD 84
PL+GL+F +KD+ DV G T +G A +A A A V + GA ++GKT+
Sbjct: 35 PLAGLSFGVKDVLDVQGMPTCYG----AHFPNALPAERDAACVALLRQAGAIALGKTVTA 90
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E AY+ G + NP + PGGSSSGSA AV A +VDF+LGT TGGS+ PA++
Sbjct: 91 EFAYAAPGPTR------NPLNLEHTPGGSSSGSAAAVAAGMVDFALGTQTGGSMMRPAAF 144
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQV 204
GI GF+PS AV +G+ + S DT+G+F+ D +L RV VL L D S+V
Sbjct: 145 TGILGFKPSFGAVHRSGLFLLCDSLDTIGYFSRDLSVLRRVATVLQGLPD-------SRV 197
Query: 205 IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEG-NK 263
A L +T + ++E+ +H +G +
Sbjct: 198 PTAPRIGVLDGKDLGPITPAALAALEQ---------------------GCEHLEQQGAHL 236
Query: 264 EQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPD-LGPGISERVWEAVRTSAQKID 322
E+ + P L L + YE + V PD L P + + + + A
Sbjct: 237 ERLPADPQLKELLILQGQIMAYEMARSLLP-VWQASPDALRPITVQAIKQGLELPAADYH 295
Query: 323 VCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSG 382
Q+ + +L+ G L+ P PGP P +D + + R +SLL G
Sbjct: 296 AWQARRRQLQTEWQERYGHFDALLTPAAPGPAP-YGLDSTGSSILN-RPWSLL------G 347
Query: 383 FCQVSIPL-GLHDNLPVAISLLAKHGSDGFLLNLV 416
+ +S+P G + LP+ + L+ + D LL+L
Sbjct: 348 WPTLSLPAPGQNSPLPLGLQLIGQPHQDAALLDLA 382
>gi|172062550|ref|YP_001810201.1| amidase [Burkholderia ambifaria MC40-6]
gi|171995067|gb|ACB65985.1| Amidase [Burkholderia ambifaria MC40-6]
Length = 374
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 169/381 (44%), Gaps = 37/381 (9%)
Query: 30 GLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYS 89
G T AIKD D+ GH T + A AA A V +L G GK M E+A+
Sbjct: 14 GPTIAIKDTIDIAGHPTRAASRALADAPPAARH-ADVVRLLLDAGWQIAGKANMHELAFG 72
Query: 90 INGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFG 149
+ G N GTP NP P R+PGGSSSGSA VG +VD +LGTDTGGS+R PA+ CG+ G
Sbjct: 73 MTGINDTTGTPVNPQDPLRIPGGSSSGSASLVGLGVVDAALGTDTGGSIRGPAACCGVAG 132
Query: 150 FRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAED 209
+P+ VS GV P + D VG FA D ++ + V+ +A + R + +
Sbjct: 133 LKPTFGRVSRRGVAPADTTLDCVGPFARD---VDTLAAVMAAIAPGFDRARAAAPV---- 185
Query: 210 CLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSI 269
G I +V++ + G + +E +
Sbjct: 186 ------------------------AGCTIAHVVVDADAAIAAALDTALRASGLRVREAVL 221
Query: 270 PSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSVKT 329
L A +A + E G V T K LG + R+ A T+ ++ ++V+
Sbjct: 222 DELPAAFAAGLAVINAETSRAFGHLVATGK--LGADLDARLRTAATTTPAALEEAEAVRA 279
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIP 389
A + A L +LV+PT+P P LQ + V SL+ +SG +S+P
Sbjct: 280 RFTAQVDAALEHADVLVLPTLPALPITLQQARDGVSVIAMS--SLIRPFNLSGHPALSLP 337
Query: 390 LGLH-DNLPVAISLLAKHGSD 409
L L L + ++ + G+D
Sbjct: 338 LPLAGTRLKAGLQIVGRKGAD 358
>gi|388568361|ref|ZP_10154780.1| amidase [Hydrogenophaga sp. PBC]
gi|388264406|gb|EIK89977.1| amidase [Hydrogenophaga sp. PBC]
Length = 562
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 187/420 (44%), Gaps = 52/420 (12%)
Query: 18 QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATS 77
QP + + PL GL FA+KD DV T P + RT A + A V +L GAT
Sbjct: 17 QPLRTREEGPLKGLRFAVKDNIDVQTWPTTAACPAFERT---APAHATVVQRLLDAGATL 73
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
GKT +D+ A +NG YG N P V GGSSSGSAV V VDFSLGTDT GS
Sbjct: 74 DGKTNLDQFACGLNGTRSPYGPVPNAFDPTLVSGGSSSGSAVVVARGEVDFSLGTDTAGS 133
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ-LADD- 195
RVPA I G +PS +S GV+P AQS D V FA + + RV Q +A D
Sbjct: 134 GRVPAGLNNIVGLKPSRGLISAHGVLPAAQSLDCVSIFA---RTVGLAARVFAQAVAHDP 190
Query: 196 ----------VNLVRPSQVIFA-EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
V P+ F D L PS + ++ ++ G I
Sbjct: 191 QDPYSRELPLVTTPWPAGFRFGVPDDLSACDAPSRAAFERAIEQLKAQGG-----TPITF 245
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGP 304
DY Q F + E ++ +A +A+R F + D + V +G
Sbjct: 246 DY--------QPFAEIADLLYESAL--VAERYAAIRRF----FDEHEADVIEPVHGIVGR 291
Query: 305 GISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP--GPPPKLQMDPS 362
G R + A ++ + Q++ RAA + ++V+PT+P +Q DP
Sbjct: 292 G---RAYSAADWCEAQVRL-QALSQRARAAWKGM----DVMVVPTMPIHASIADMQADPV 343
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLLNLVETLHN 421
AL R + + + + +S+P GL D LP ++L+A G D L+ L + LH+
Sbjct: 344 ALN---RRLGAYTNFVNLLDYAALSVPTGLRSDALPFGVTLIAAAGMDWPLIELGQRLHH 400
>gi|443646845|ref|ZP_21129523.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
DIANCHI905]
gi|159028871|emb|CAO90676.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335674|gb|ELS50138.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
DIANCHI905]
Length = 439
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 172/402 (42%), Gaps = 38/402 (9%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ FA+K++FD+ G VT G+ R H AA A A+ + + GA +G T MDE A
Sbjct: 64 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAARQDAIAIQTLEAAGAVLVGATNMDEYA 122
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
Y EN HY NP P R+ GGSS GSA AV A LV +LG+DT GSVRVPA+ CG+
Sbjct: 123 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 182
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQ--LADDVNLVRPSQVI 205
G +P+ VS G+ S D G+F+ + + + + + L ++ + ++
Sbjct: 183 VGLKPTFGRVSRQGLFLFVSSLDHPGFFSDNVADMAAIWSLFAKNNLKAPLSGLEGVKIA 242
Query: 206 FAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQ 265
A+D Q + P V + + E+L +
Sbjct: 243 LADDYFQQGAEPE--VFEAVTAIAERL-----------------------------GVTK 271
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQ 325
+ +IP A +A ++ E N H + T D P +R + Q
Sbjct: 272 KITIPETARARAAAYIISAAEGANWHLPRLQTRLEDFDPATRDRFLAGALIPSSWYLQAQ 331
Query: 326 SVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALE----VFRARAFSLLSIAGVS 381
+ R L + + I++ PT+P P L ++ ++ + R
Sbjct: 332 RFRRWYRDRLREIFAEVDIILTPTIPCIAPPLGVEKMIIDGQELLIRPNLGRFTQPFSFI 391
Query: 382 GFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTL 423
G +S+P+ LP+ + ++A + +L + L L
Sbjct: 392 GLPALSLPIKRPSQLPLGLQIIAAPDREDLILRVARVLEEML 433
>gi|15897667|ref|NP_342272.1| glutamyl-tRNA amidotransferase subunit A [Sulfolobus solfataricus
P2]
gi|284174992|ref|ZP_06388961.1| glutamyl-tRNA amidotransferase, subunit A (gatA-1) [Sulfolobus
solfataricus 98/2]
gi|384434281|ref|YP_005643639.1| amidase [Sulfolobus solfataricus 98/2]
gi|6015711|emb|CAB57538.1| glutamyl-tRNA amidotransferase, subunit A [Sulfolobus solfataricus
P2]
gi|13813938|gb|AAK41062.1| Glutamyl-tRNA amidotransferase, subunit A (gatA-1) [Sulfolobus
solfataricus P2]
gi|261602435|gb|ACX92038.1| Amidase [Sulfolobus solfataricus 98/2]
Length = 398
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 182/426 (42%), Gaps = 44/426 (10%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTA 64
+S Y AF+ ++ + +L +TF IKD+ T G+ + A
Sbjct: 7 NSKYNAFITLHTIEEGNDKGKL--KDVTFGIKDVILTKDVRTTAGS--RVLENYVPQRNA 62
Query: 65 PAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
V A+L G IGKT E A + G NP P+R+ GGSS GSAVAV
Sbjct: 63 YVVDAILREGGKIIGKTNTHEFALGATNTSSIGGPARNPVDPERISGGSSGGSAVAVKLD 122
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDP-KILN 183
+VD +GTDTGGSVR+P+S CG+ GF+P+ + GVIP + S DTVG D ++L
Sbjct: 123 MVDVGIGTDTGGSVRIPSSLCGVIGFKPTTGLIPNDGVIPFSWSLDTVGIIVKDNIRLLR 182
Query: 184 RVGRVLL----QLADDVNL-VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHII 238
RV V+L + + L RP +F D +++S I L+K + H
Sbjct: 183 RVFDVVLPNEKRKVEIAKLRTRPRLGLFLFDDMEVSRI--------LLKDIYAKLSSHF- 233
Query: 239 ENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
D V+ +P L+ + G+K + R + E + H DW++
Sbjct: 234 ------DIVEVDLPLLRQY---GSKTR--------------RTISLAEAASYHKDWISEY 270
Query: 299 KPDLGPGISERVWEAVRTSAQK-IDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ + ++ SA ID + + + + IL PT P++
Sbjct: 271 SDKYFKDTYTLLLDGMKISATDYIDALRHRRVLIEEYVKVFKNIDFILS-PTTKIVAPRI 329
Query: 358 QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVE 417
S FR + + V G +S+P ++LP + + + DG LL + E
Sbjct: 330 SDVISNPLQFREYLIANTELFNVVGAPSISVPFSTLNDLPAGLMISGELYKDGDLLEVAE 389
Query: 418 TLHNTL 423
+ N +
Sbjct: 390 YILNIV 395
>gi|413961019|ref|ZP_11400248.1| amidase [Burkholderia sp. SJ98]
gi|413931733|gb|EKS71019.1| amidase [Burkholderia sp. SJ98]
Length = 380
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 185/415 (44%), Gaps = 42/415 (10%)
Query: 10 AFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLA 69
AF+++F L ++A T AIKD D+ G+ T + A A A V
Sbjct: 3 AFLQQFDLATHAAA-----DAPTIAIKDSIDIAGYPTTAASRALADAPPAPRH-AQVVQR 56
Query: 70 VLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFS 129
+L G K M E+A+ + G N GTP NP P R+PGGSSSGSA AVG LVD +
Sbjct: 57 LLDAGWRITAKANMHELAFGMTGLNDFSGTPVNPQDPARIPGGSSSGSASAVGLGLVDAA 116
Query: 130 LGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL 189
LGTDTGGSVR PA+ CG+ G +P+ VS GV P S D VG FA + +N V V+
Sbjct: 117 LGTDTGGSVRCPAACCGVIGLKPTFGRVSREGVAPRQTSLDCVGPFARE---MNTVIDVM 173
Query: 190 LQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD 249
L + R + + A R+ + +V + G V
Sbjct: 174 LAIDPSFQGGRARRDVTAIRVALPDVQAEGRIRDAVASAVAR--SGLASRAV-------- 223
Query: 250 KVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISER 309
++ S+Q + G LA +++ E G V + K LGP I R
Sbjct: 224 QLESIQDAFTAG----------LAVINA--------ETWRAFGHLVGSGK--LGPDILAR 263
Query: 310 VWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRA 369
+ A T ++D + ++ + + +L D +L++PT+P P ++ + V
Sbjct: 264 LSAAANTPVSELDAAERIRRDFTDEVDRVLADADVLILPTMPSLPITIEAARAGTPVIAM 323
Query: 370 RAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGFLLNLVETLHNTL 423
SL+ +SG +++P+ + +L + ++ + G D + + L L
Sbjct: 324 S--SLIRPFNLSGHPALTLPVPVEGASLKAGLQIVGRKGDDETVCAVAAYLEAML 376
>gi|241662116|ref|YP_002980476.1| amidase [Ralstonia pickettii 12D]
gi|240864143|gb|ACS61804.1| Amidase [Ralstonia pickettii 12D]
Length = 453
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 182/406 (44%), Gaps = 33/406 (8%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL +IKD+FDV G VT G+ A AT+ A AV + + GA +G+T M E A
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALA-DQPRATADAAAVARLRAAGAVLLGRTNMSEFA 131
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+S G N HYGTP P R GGS+SG AV V + +LGTDTGGS+R+P+++C +
Sbjct: 132 FSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFCNL 191
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
GF+P+ V G +P++ S D+ G A V VL + +
Sbjct: 192 TGFKPTARRVPMTGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGESGN------------ 239
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEY 267
D +++P GL V + + G ++N + + + +++ G +
Sbjct: 240 -DAFDTAAVP----LAGLRFGVTQDYVGADLDNTVAVAFER----AVERLERAGAHIVRF 290
Query: 268 SIPSLAALS--SAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQK-IDVC 324
P L L ++ E H + + P ++ R+ + SA IDV
Sbjct: 291 EFPELLQLPEINSGGGFSAAESWAWHRSLLARAEAQYDPRVATRIRRGEQMSAAAYIDVI 350
Query: 325 QSVKTELRAALSALLGDHGILVIPTVPGPPPK---LQMDPSALEVFRARAFSLL--SIAG 379
+ + AA LG ++PTV PP+ L+ D +A FR A +L S+
Sbjct: 351 NARARMI-AAARKRLGHFDAWLMPTVAIVPPEVAPLEADDAAF--FRVNALALRNPSVIN 407
Query: 380 VSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
C +++P+ LPV +SL D +L + + L+
Sbjct: 408 FLDGCALTLPVHAAGELPVGLSLCGLANDDARILRVGRAVEAALRR 453
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,093,615,996
Number of Sequences: 23463169
Number of extensions: 305489666
Number of successful extensions: 847642
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13237
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 821397
Number of HSP's gapped (non-prelim): 18454
length of query: 431
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 286
effective length of database: 8,957,035,862
effective search space: 2561712256532
effective search space used: 2561712256532
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)