BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044294
(431 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FR37|AMI1_ARATH Amidase 1 OS=Arabidopsis thaliana GN=AMI1 PE=1 SV=1
Length = 425
Score = 577 bits (1487), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/419 (68%), Positives = 348/419 (83%), Gaps = 5/419 (1%)
Query: 5 DSDYGAFMEKFVLQPSSSAHQLP-LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATST 63
++D+GAF+EK + P+S++ P L GLTFAIKDIFDV+G VTGFGNPDW RTHSAATST
Sbjct: 4 NNDFGAFIEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATST 63
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
AP V ++L GAT++G TIMDEMAYSINGEN HYGTP NP A DRVPGGSSSGSAVAV A
Sbjct: 64 APVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAA 123
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
+LVDFS+GTDTGGSVRVPASYCGIFGFRPSH AVST G+ PMAQSFDTVGWFA D L
Sbjct: 124 RLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATLK 183
Query: 184 RVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGH-IIENVI 242
RVG VLLQ +N + PSQ+I A+DC +L S+P D + Q LV SVEK FGG+ +++ V
Sbjct: 184 RVGCVLLQ-QHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKKVN 242
Query: 243 LGDYVKDKVPSLQHFLSEGN--KEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKP 300
LG+Y+ VPSL+HF++ + +QE+ IPSL ALSS+MRLLQR+EFK NHG W+++VKP
Sbjct: 243 LGEYIGQNVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRHEFKINHGAWISSVKP 302
Query: 301 DLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMD 360
+ GPGISER+ EA+RTS +KID C+SVK+EL ALS LLG+ G+LVIPTVPGPPP LQ +
Sbjct: 303 EFGPGISERIEEAIRTSDEKIDHCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQAN 362
Query: 361 PSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
+ALE FR+RAFSLLSIAGVSGFCQVSIPLGLH+NLPV++SL+AK+GSDGFLL+LV++L
Sbjct: 363 VAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFLLSLVDSL 421
>sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana
GN=OM64 PE=1 SV=1
Length = 603
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 278/430 (64%), Gaps = 7/430 (1%)
Query: 2 ASRDSDYGAFMEKFVL----QPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTH 57
A R+ D+GAF+++F L P A + LSGLTF+I D FDV ++TGFG P W +TH
Sbjct: 41 ALREEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTH 100
Query: 58 SAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGS 117
AA TA V +L GAT +GKTIMDE+ + I GENKHYGTP NP PD VPGG SSGS
Sbjct: 101 EAAEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGS 160
Query: 118 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAW 177
AV+VGA+LVDFSLG DT G VRVPA++CGI GFRPS VS+ GV+P +QS +TVGWFA
Sbjct: 161 AVSVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFAS 220
Query: 178 DPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHI 237
DP +L +VG LL L+ V R +IFA+D +LS IP + Q + K++E L G
Sbjct: 221 DPSVLCQVGHALLNLS-AVTHRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSGYKT 279
Query: 238 IENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTT 297
++V +G YV VPSL F + K Q S +L ALSS M +QR+EFK NH +W T
Sbjct: 280 PKHVNVGQYVASNVPSLAEFCEQSGKSQN-SASTLRALSSVMLAIQRHEFKTNHEEWWQT 338
Query: 298 VKPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
K LGP S V A+++ + I VK E+RA + +LL + GILVIPTV PPP+L
Sbjct: 339 CKSFLGPRFSNDVVTALKSKNESIKSLYRVKNEMRATIQSLLKEDGILVIPTVADPPPRL 398
Query: 358 QMDPS-ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+ +L F R ++L IA +SG CQV+IPLG H + P+++SLL +G D FLL+
Sbjct: 399 NTKRNKSLNEFLDRTYALSCIASMSGCCQVTIPLGEHGDRPISVSLLTYYGGDKFLLDTT 458
Query: 417 ETLHNTLKEE 426
++ +L+++
Sbjct: 459 LDVYASLQDQ 468
>sp|Q9LVH5|OE64C_ARATH Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana
GN=OEP64 PE=1 SV=1
Length = 589
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 277/399 (69%), Gaps = 6/399 (1%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
+GLTFA+ D+FD+ G+VTGFG+PDW RTH AA+ST+P V ++ GGAT +GKT++DE A+
Sbjct: 59 TGLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAF 118
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
SI+GENKHY +PTNP AP R+PGG+ SG+AVAV VDF+LG DT G VRVPA YCG+
Sbjct: 119 SISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVL 178
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQL--ADDVNLVRPSQVIF 206
GF+ S+ A+S G+IP++ S D+VGWFA DP L RVG VLLQL A N P Q+I
Sbjct: 179 GFKSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRN---PRQIIL 235
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQE 266
A+DC QL IP DR+TQ + KS EKLFG ++++ L Y + KVPSL+ F +
Sbjct: 236 ADDCFQLLKIPVDRITQVVTKSAEKLFGRQLLKHQNLETYFETKVPSLKEF-ARTKAIAN 294
Query: 267 YSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQS 326
+ + L++ M+LLQR+EF NHGDW+ TVKP + P I +V E + ++ + +
Sbjct: 295 TKVSTSRLLANVMQLLQRHEFLQNHGDWINTVKPAIDPVILSQVCENPELTNEETENLNA 354
Query: 327 VKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQV 386
++ E R A+ +LL D GILVIPT+P PPKL E ++ RA SLLSIA +SG CQV
Sbjct: 355 IRNETRVAIGSLLKDDGILVIPTLPAVPPKLGSKEITSEDYQNRASSLLSIASISGCCQV 414
Query: 387 SIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKE 425
++PLG H+ P+++S + +HG D FLL+ V+T++ +L+E
Sbjct: 415 TVPLGHHEKCPISVSFIGRHGGDRFLLDTVQTMYPSLQE 453
>sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64 OS=Pisum
sativum GN=TOC64 PE=1 SV=1
Length = 593
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/399 (52%), Positives = 287/399 (71%), Gaps = 4/399 (1%)
Query: 29 SGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY 88
S L FAI DIFD++GHV+ FG+P+WARTH A+STA AV A++ GAT IG T++DE+AY
Sbjct: 62 SSLNFAISDIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAY 121
Query: 89 SINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIF 148
I+GENKH+GTPTNP P+RVPGGSSSG+AVAV A VDFSLG DT G VRVPA +CGI
Sbjct: 122 GISGENKHFGTPTNPAVPNRVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGIL 181
Query: 149 GFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFAE 208
GFRPSH AVS G+IP++ S DTVGWFA DP +L RVG +LLQ A V P Q+I A+
Sbjct: 182 GFRPSHGAVSHVGIIPVSTSLDTVGWFAKDPDVLRRVGHILLQ-APFVMQRNPRQIIIAD 240
Query: 209 DCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHF-LSEGNKEQEY 267
DC Q ++P DR +Q ++K+ EKLFG +++++ DY+ KV SL+ + + N +
Sbjct: 241 DCFQHLNVPLDRTSQVVIKATEKLFGKQVLKHINFEDYISSKVSSLKACSIQKSNGVLKS 300
Query: 268 SIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPGISERVWEAVRTSAQKIDVCQSV 327
S SL L++ M+ LQR+EF++ H +W++ VKPDL P +S ++ E S +I+ +SV
Sbjct: 301 S--SLKLLANVMQSLQRHEFEHTHSEWMSIVKPDLHPAVSAQLHEKFEVSELEIENSKSV 358
Query: 328 KTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVS 387
++ELR A+++LL D G+LVIPTV PPPKL +++RA SLLSIA +SG CQV+
Sbjct: 359 RSELRVAVNSLLKDEGVLVIPTVADPPPKLGGKEFLSHDYQSRALSLLSIASISGCCQVT 418
Query: 388 IPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLKEE 426
+PLG D PV++SL+A+HG D FLL+ ++T++ L+E+
Sbjct: 419 VPLGFFDKNPVSVSLIARHGGDRFLLDTLKTMYTVLQEQ 457
>sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=gatA PE=3 SV=1
Length = 476
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 190/430 (44%), Gaps = 40/430 (9%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H+ PL+G+ AIKD V G G+ A + +LS GA +GKT M
Sbjct: 58 HEGPLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLSAGAVILGKTNM 115
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + E H+G NP +RVPGGSS GSA V A F+LG+DTGGSVR PAS
Sbjct: 116 DEFAMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAS 175
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLV 199
+CG+ G +P++ AVS GV+ A S + VG A + + +++ + + + ++
Sbjct: 176 FCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAVLMDVIAGYDRRDSTSIDSK 235
Query: 200 RPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSLQHF 257
Q +D L +P + +G+ VEK I + LG + + +P +++
Sbjct: 236 TEYQKALVDDVKGLKIGVPKEFFGEGIHPDVEKAVWDAIHKCESLGATWEEVSMPHIKYA 295
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVWEAV- 314
L+ Y I +++ SS + RY F+ +W V G V +
Sbjct: 296 LA------SYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKRRIL 349
Query: 315 ------------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---M 359
+ + + V VK + ALS + +L+ PT+P P K+
Sbjct: 350 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKV----DLLMAPTMPNPAFKIGEKIE 405
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
DP L + +++AGV +S+P G D LP+ + ++ K + +L T
Sbjct: 406 DPLTLYLSDINTCP-INLAGVP---SISVPCGFTDGLPIGLQIMGKPFDEETVLRAAYTF 461
Query: 420 HNTLKEELQR 429
+R
Sbjct: 462 EKNTDYHTKR 471
>sp|Q8THJ1|GATA_METAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=gatA PE=3 SV=1
Length = 476
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 190/430 (44%), Gaps = 40/430 (9%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H+ PL+G+ AIKD V G G+ A + +L GA +GKT +
Sbjct: 58 HEGPLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLDAGAVILGKTNL 115
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + E +YG NP +RVPGGSS GSA V A F+LG+DTGGSVR PA+
Sbjct: 116 DEFAMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAA 175
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLV 199
+CG+ G +P++ AVS GV+ A S + VG A + + +++ + + + ++
Sbjct: 176 FCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDIAILMDVIAGYDRRDSTSIDSK 235
Query: 200 RPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHF 257
Q +D L +P + +G+ VEK I + LG ++ +P++ +
Sbjct: 236 TEYQKALVDDVKGLKIGVPKEFFGEGIHPGVEKAVWNAIHKFESLGATRQEVSMPNINYA 295
Query: 258 LSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVWEAV- 314
L+ Y I +++ SS + RY F+ N +W V G V +
Sbjct: 296 LA------SYYIIAMSEASSNLARFDGTRYGFRANGENWHAMVSKTRAEGFGTEVKRRIL 349
Query: 315 ------------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ---M 359
+ + + V VK + ALS + +L+ PT+P P ++
Sbjct: 350 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSTV----DLLMAPTMPNPAFRIGEKIE 405
Query: 360 DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
DP L + +++AGV VS+P G D LPV + ++ K + +L T
Sbjct: 406 DPLTLYLSDVNTCP-INLAGVP---SVSVPCGFTDGLPVGLQIMGKPFDEPTVLRAAYTF 461
Query: 420 HNTLKEELQR 429
+R
Sbjct: 462 EKNTDYHTKR 471
>sp|Q46E35|GATA_METBF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1
Length = 475
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 192/433 (44%), Gaps = 46/433 (10%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGK 80
H PL+G+ AIKD V G G+ D+ +A + +L+ GA +GK
Sbjct: 57 HNGPLAGVPIAIKDNISVVGLPNSCGSKILEDYIPPFNAYV-----IEKLLAAGAVILGK 111
Query: 81 TIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRV 140
T MDE A + E ++G NP +RVPGGSS GSA V A F+LG+DTGGSVR
Sbjct: 112 TNMDEFAMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRC 171
Query: 141 PASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDV 196
PA++CG+ G +P++ AVS GV+ A S + VG A + +++ + + + +
Sbjct: 172 PAAFCGVVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDIAVLMDVIAGYDRKDSTSI 231
Query: 197 NLVRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIENVILG-DYVKDKVPSL 254
+ Q ED L +P + +G+ VEK I + LG + + +P +
Sbjct: 232 DSKTEYQKALIEDVKGLKIGVPKEFFGEGIHPDVEKAVWNAIHKCEDLGASWEEVSMPHI 291
Query: 255 QHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGDWVTTVKPDLGPGISERVWE 312
++ L+ Y I +++ SS + RY ++ + +W V G V
Sbjct: 292 KYALA------SYYIIAMSEASSNLARFDGTRYGYRASGENWHAMVSKTRAEGFGTEVKR 345
Query: 313 AV-------------RTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ- 358
+ + + + V VK + ALS + +L+ PT+P P K+
Sbjct: 346 RILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKV----DVLMAPTMPNPAFKIGE 401
Query: 359 --MDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
DP L + +++AGV +S+P G D LP+ + ++ K + +L
Sbjct: 402 KIEDPLTLYLSDVNTCP-INLAGVP---SLSVPCGFTDGLPIGLQIMGKPFDEPAVLRAA 457
Query: 417 ETLHNTLKEELQR 429
T +R
Sbjct: 458 YTFEQNTDYHTKR 470
>sp|Q2NHN5|GATA_METST Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=gatA PE=3 SV=1
Length = 455
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 210/464 (45%), Gaps = 80/464 (17%)
Query: 1 MASRDSDYGAFMEKFVLQPSSSAHQL-----------PLSGLTFAIKDIFDVDGHVTGFG 49
+ ++ D AF++ + + +A + L+GL IK +V+ +
Sbjct: 28 IEEKNDDINAFVQLDIEKARKTAEDIDKRIKNNEETGKLAGLVIGIKSNINVEDFIISAA 87
Query: 50 NPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRV 109
+P + + +T + +L IG T MDE A + E YG NP AP +
Sbjct: 88 SPTLKNYYGSYNATV--INRILDEDGVIIGLTNMDEFAAGSSTETSMYGPTNNPKAPGHI 145
Query: 110 PGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSF 169
PGGSS GSA A+ A + D +LG+DTGGS+R PAS+CG+ GF+P++ VS G++ +A S
Sbjct: 146 PGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGVMGFKPTYGMVSRQGLLDLAMSL 205
Query: 170 DTVGWFA------------------WDPKILNRVGRVLLQLADDVNLVRPSQVIFAEDCL 211
D +G FA +D +N+ L+ D N Q I
Sbjct: 206 DQIGPFANDTTGIGLMLNVICGYDPYDTTTINKQPEDFLK--DTTNSTLEGQTIGV--VK 261
Query: 212 QLSSIPSDRVTQGLVKSVEKL--FGGHI----IENVILGDYVKDKVPSLQHFLSEGNKEQ 265
+ I D++T + KS++ + G I E++ LG +P+
Sbjct: 262 EFMDITDDKITSQINKSIDDMTSLGAEIKELSFEDINLG------LPT------------ 303
Query: 266 EYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV-------KPDLGPGISERVWEAVRTSA 318
Y + + SA R +Y+ + +G+ + V + ++G IS++ + S
Sbjct: 304 -YYLINYVEFFSATR---KYDGR-KYGERIEEVCGAEVARRIEIGSYISQKEF-----SG 353
Query: 319 QKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI- 377
+ + ++ +R + LL D ++ PTVP P K+ + ++++ A+ +L++
Sbjct: 354 KYYNKALQARSLIRNEFNELLNDVDVIAGPTVPKLPHKIGEEIETMDMY---AYDVLTVL 410
Query: 378 AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
A ++G S+ GL DN+PV + L AK D +L+ + L N
Sbjct: 411 ANITGIPASSMNSGLVDNIPVGLQLQAKPEDDHKILSTMSALEN 454
>sp|Q73Q68|GATA_TREDE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema
denticola (strain ATCC 35405 / CIP 103919 / DSM 14222)
GN=gatA PE=3 SV=1
Length = 485
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 187/425 (44%), Gaps = 43/425 (10%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
S + PL GL A+KD + G + + + A A + +L GA +G+
Sbjct: 68 SFDEKPLLGLPIAVKDNISMAGKLCTCCSRSLQGYY--APYNATVIDRLLEAGAVLMGRI 125
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE+A + E YG NP R PGGSS GSA V FSLGT+TGGSVR+P
Sbjct: 126 NMDELAMGSSTEFSCYGPSRNPVDRARTPGGSSGGSAAVVAGNQAPFSLGTETGGSVRLP 185
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRP 201
ASYCGI+G +P++ S GV+ + S D VG F + + +G ++ D+ +
Sbjct: 186 ASYCGIYGLKPTYGLFSRYGVVAFSSSLDQVGLFGKEAADI-ALGLAVMAGKDEKD--ET 242
Query: 202 SQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE- 260
S+ L+LS+ + + L ++ K F + L VK L +L++
Sbjct: 243 SEEADFSSLLKLSAYSKEEIAS-LKIAIPKEF----LNTQGLDQEVKQVFDELCAWLTKN 297
Query: 261 GNKEQEYSIPSLA---------ALSSAMRLLQRYE----------FKNNHGDWVTTVKPD 301
G K +E SIP L A+S A L R + K N ++ T
Sbjct: 298 GAKLEEVSIPVLEASIPTYYTLAISEAASNLSRIDGIRFGLRKDTGKGNDELYIQTRSEG 357
Query: 302 LGPGISERVWE-----AVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
GP + R+ + S + +V+ ++ ++ +L + ++ PT P P K
Sbjct: 358 FGPEVKRRIITGNYVLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFK 417
Query: 357 LQM---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFL 412
L DP A+ + + F+ + ++ +S+P G LPV I K S+ +
Sbjct: 418 LNEKVDDPIAM--YLSDLFT--TFVNLARIPSLSVPAGKTKAGLPVGIQFCGKKFSEDRI 473
Query: 413 LNLVE 417
L L +
Sbjct: 474 LKLAK 478
>sp|Q9JTZ5|GATA_NEIMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=gatA PE=3 SV=1
Length = 481
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 190/422 (45%), Gaps = 62/422 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGIPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQKLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF- 206
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL----SEGN 262
+D L D T+ L + ++ L G E G+ D + +LQ+ + ++G
Sbjct: 232 PKDSTSLEREKED-YTRDLNQPLKGLKIGLPKEYFGEGNSA-DVLTALQNTIDLLKAQGA 289
Query: 263 K-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPDLG 303
+ + + SIP+ L+SA L RY +F + + T G
Sbjct: 290 ELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFSDLEEMYGKTRAEGFG 349
Query: 304 PGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
+ R+ ++A AQK+ + V + + A + +++ PT P
Sbjct: 350 SEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVADDFQTAFARC----DLILAPTAPS 403
Query: 353 PPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD-NLPVAISLLAKHGSDGF 411
PK+ D S +E + + +++ ++G +++P G LP+ + L+ + S+
Sbjct: 404 AAPKIGADASPVETYLSDIYTI--AVNLAGLPALTLPAGFSSGGLPIGVQLIGNYFSEAK 461
Query: 412 LL 413
+L
Sbjct: 462 IL 463
>sp|Q97ZG1|GATA_SULSO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=gatA-2 PE=3 SV=1
Length = 478
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 194/432 (44%), Gaps = 81/432 (18%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNP---DWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
L+G+ AIKD +G T + D+ + A + + GA IGKT MD
Sbjct: 64 LAGVLIAIKDNISTEGIRTTCASKMLEDYIPPYDATV-----IEKLKKEGAVIIGKTNMD 118
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A V+ +LG+DTGGS+R PA+Y
Sbjct: 119 EFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAY 178
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL----QLADDVNL-- 198
IFG +PS+ VS G++ A S + +G A + + L + ++ + A +NL
Sbjct: 179 NAIFGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDERDATTINLNL 238
Query: 199 --------VRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDK 250
V+ ++ D L++S P V + +V + G +IE+ LG+
Sbjct: 239 NFELKERSVKNVRIGVLSDILEMSEKPVSGVIKDVVNKLSS--EGALIEDTKLGN----- 291
Query: 251 VPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKPDL 302
EY++P+ + A+S A L RY+ K G+W +
Sbjct: 292 --------------AEYALPAYYIIAMSEASSNLARYDGVRYGYSKYMEGNWREVYAKNR 337
Query: 303 GPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVI 347
G + R+ +E A K V+ ++ L L + IL+
Sbjct: 338 GEAFGMEVKRRILLGSFILSAGYYEEFYLKALK------VRNLIKKNLDELFKKYDILLS 391
Query: 348 PTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLL 403
PT+P PPK+ DP R A L + IA ++ +S+P+G + +LP+ + L+
Sbjct: 392 PTMPILPPKIGEVINDP-----VRMYAMDLNTVIANLAAIPALSMPVGFYSDLPIGLQLM 446
Query: 404 AKHGSDGFLLNL 415
K+ SD +L+N+
Sbjct: 447 GKYLSDIYLINI 458
>sp|C4ZHB9|GATA_EUBR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium
rectale (strain ATCC 33656 / VPI 0990) GN=gatA PE=3 SV=1
Length = 503
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 205/465 (44%), Gaps = 77/465 (16%)
Query: 9 GAFMEKFVLQPSSSAHQLP--LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPA 66
GA + +Q A +L L+G+ AIKD +G +T + + T TA A
Sbjct: 50 GALKKAAEVQAKIDAGELKGALAGVPVAIKDNMCTEGLLTTCSSKIL--YNFIPTYTAEA 107
Query: 67 VLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLV 126
V + G +GKT MDE A E +G NP + VPGGSS GS AV A+ V
Sbjct: 108 VKRLEDAGCVIVGKTNMDEFAMGSTTETSAFGATKNPWNTEHVPGGSSGGSCAAVAAEEV 167
Query: 127 DFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 186
F+LG+DTGGS+R P+S+CG+ G +P++ VS G+I S D +G A D
Sbjct: 168 PFALGSDTGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKD-------- 219
Query: 187 RVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSD--RVTQGLVKSVEKLFGGHIIENVILG 244
D ++ + I + D +S+ D + T+ LV V+ + G I LG
Sbjct: 220 ------VTDCAIIL--EAIASYDTKDSTSVNRDDLKFTEALVDDVKGMKIG--IPKDYLG 269
Query: 245 DYVKDKVPSLQHFLSEGNKEQ------------EYSIPS--LAALSSAMRLLQRY----- 285
D + +V S ++ K++ EY+IP+ + A + A L R+
Sbjct: 270 DGLDPEVKSAILAAADELKKKGAVVEEFDLGLVEYAIPAYYVIACAEASSNLARFDGVKY 329
Query: 286 -----EFKNNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKT 329
E+ + H + + GP + R+ ++A A + VK
Sbjct: 330 GYRTKEYTDLHNMYKKSRSEGFGPEVKRRIMLGSFVLSSGYYDAYYLKALR------VKA 383
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQM---DPSALEVFRARAFSL-LSIAGVSGFCQ 385
++ A + +++ P P PKL DP ++++ +++ +++AG+ G
Sbjct: 384 LIKKAFDDAFAKYDVILGPAAPTTAPKLGESLSDP--IQMYLGDIYTISVNLAGLPG--- 438
Query: 386 VSIPLGLHDN-LPVAISLLAKHGSDGFLLNLVETLHNTLKEELQR 429
+S+P G+ N LP+ + L+ + ++ + T EL+R
Sbjct: 439 ISLPCGMDKNGLPIGLQLIGDCFKEKNIIRAAYSFEKT--RELKR 481
>sp|A1KUH8|GATA_NEIMF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup C / serotype 2a (strain ATCC
700532 / FAM18) GN=gatA PE=3 SV=1
Length = 481
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 187/418 (44%), Gaps = 54/418 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLVRPSQ 203
G +P++ VS G++ A SFD G A + +LN + D +L R
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAEDCAILLNAI--TGFDPKDSTSLEREK- 242
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQ----HFLS 259
ED + + P V GL K + FG +V+ +++ + L+ +
Sbjct: 243 ----EDYTRDLNQPLKGVKIGLPK---EYFGEGNSADVLTA--LQNTIDLLKAQGAELIE 293
Query: 260 EGNKEQEYSIPSLAALSSAM--RLLQRY----------EFKNNHGDWVTTVKPDLGPGIS 307
+ + SIP+ L+SA L RY +F + + T G +
Sbjct: 294 VSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFGSEVK 353
Query: 308 ERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
R+ ++A AQK+ + V + + A + +++ PT P PK
Sbjct: 354 RRIMIGTYVLSHGYYDAYYLKAQKLR--RLVADDFQTAFARC----DLILAPTAPTAAPK 407
Query: 357 LQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGFLL 413
+ D S +E + + +++ ++G +++P G LPV + L+ + ++ +L
Sbjct: 408 IGADASPVETYLSDIYTI--AVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKIL 463
>sp|A9M003|GATA_NEIM0 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup C (strain 053442) GN=gatA PE=3
SV=1
Length = 481
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 188/422 (44%), Gaps = 62/422 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S+ T+T V +L G ++G+T MDE A
Sbjct: 68 LTGIPVAYKDIFCQTGWRSACASKMLDNFISSYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF- 206
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL----SEGN 262
+D L D T+ L + ++ L G E G+ D + +LQ+ + ++G
Sbjct: 232 PKDSTSLEREKED-YTRDLNQPLKGLKIGLPKEYFGEGNSA-DVLTALQNTIDLLKAQGA 289
Query: 263 K-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPDLG 303
+ + + SIP+ L+SA L RY +F + + T G
Sbjct: 290 ELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFGDLEEMYGKTRAEGFG 349
Query: 304 PGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
+ R+ ++A AQK+ + + + +++ PT P
Sbjct: 350 SEVKRRIMIGTYVLSHGYYDAYYLKAQKL------RRLVADDFQTVFARCDLILAPTAPT 403
Query: 353 PPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGF 411
PK+ D S +E + + +++ ++G +++P G LPV + L+ + ++
Sbjct: 404 AAPKIGADSSPVETYLSDIYTI--AVNLAGLPALTLPAGFSGGGLPVGVQLIGNYFAEAR 461
Query: 412 LL 413
+L
Sbjct: 462 IL 463
>sp|A5FQ07|GATA_DEHSB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain BAV1) GN=gatA PE=3 SV=1
Length = 486
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 174/420 (41%), Gaps = 41/420 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD+ G T + + A V + GA +GKT MDE
Sbjct: 70 PLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN Y T NP D+VPGGSS GSA V A FSLG+DTGGS+R PAS+C
Sbjct: 128 AMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCS 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G++PS+ VS G++ A S D +G F D V + D + P V
Sbjct: 188 VTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAGFDDRDSTSVPQTVPD 247
Query: 207 AEDCLQLS------SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
L + +P + +Q + + + + LG + D+ SL H
Sbjct: 248 FSSGLDGNIKGFKLGVPKEYFSQNMRPDITEKINDALGVLSGLGASI-DREVSLPH---- 302
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYE-------FKNNHGDWVTTVK---PDLGPGISERV 310
++ + A S A L RY+ + W K GP + R+
Sbjct: 303 --TPYALAVYYILAPSEASANLSRYDGVKYGYSYNPTENMWEAMEKTRAKGFGPEVKRRI 360
Query: 311 WEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPP----PKLQMDP 361
SA D Q V+T + + + L+ PT P P KL DP
Sbjct: 361 MIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEKYDALITPTTPNLPFSIGEKLN-DP 419
Query: 362 SALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
E++ ++ ++IAG+ VSIP G D LPV + ++ K +D + +
Sbjct: 420 --FEMYMCDTCTIPINIAGLPA---VSIPAGFVDGLPVGLQIIGKPFADQTTMRIAHAFQ 474
>sp|Q3Z6V3|GATA_DEHE1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
ethenogenes (strain 195) GN=gatA PE=3 SV=1
Length = 486
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 175/426 (41%), Gaps = 47/426 (11%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
H PL+G+ A+KD+ G T + + A V + GA +GKT M
Sbjct: 67 HIRPLTGIPMALKDVLCTKGIRTTCSS--RMLENFVPPYNAHVVDKLAEEGAVLLGKTNM 124
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + EN + T NP +VPGGSS GSA V A FSLG+DTGGS+R PAS
Sbjct: 125 DEFAMGSSTENSAFFTTHNPWNTAKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPAS 184
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
+C + G +PS+ VS G++ A S D +G F D V + D + P
Sbjct: 185 FCSVTGLKPSYGMVSRYGLVAFASSLDQIGPFTKDVLDCALVMNAIAGFDDRDSTSVPQT 244
Query: 204 VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK 263
CL D +G V K + H + I + + D + L +
Sbjct: 245 APDFSSCL-------DGDIKGFKLGVPKEYFSHNMRADI-AEKINDALGVLSGL--GASV 294
Query: 264 EQEYSIPS---------LAALSSAMRLLQRYE-------FKNNHGDWVTTVK---PDLGP 304
++E S+P + A S A L RY+ + W K GP
Sbjct: 295 DREVSLPHTPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGP 354
Query: 305 GISERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPP----P 355
+ R+ SA D Q V+T + + + L+ PT P P
Sbjct: 355 EVKRRIMIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEKYDALITPTTPNLPFSIGE 414
Query: 356 KLQMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
KL DP E++ ++ ++IAG+ +SIP G D LPV + ++ K +D ++
Sbjct: 415 KLS-DP--FEMYMCDTCTIPINIAGLPA---ISIPAGFVDGLPVGLQIIGKPFADQTIMR 468
Query: 415 LVETLH 420
+
Sbjct: 469 IAHAFQ 474
>sp|Q3ZYM5|GATA_DEHSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain CBDB1) GN=gatA PE=3 SV=1
Length = 486
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 179/432 (41%), Gaps = 43/432 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD+ G T + + A V + GA +GKT MDE
Sbjct: 70 PLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDEF 127
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN Y T NP D+VPGGSS GSA V A FSLG+DTGGS+R PAS+C
Sbjct: 128 AMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFCS 187
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
+ G++PS+ VS G++ A S D +G F D V + D + P V
Sbjct: 188 VTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDAMDCALVMNAIAGFDDRDSTSVPQTVPD 247
Query: 207 AEDCLQLS------SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE 260
L + +P + +Q + + + + LG + D+ SL H
Sbjct: 248 FNSGLDGNIKGFKLGVPKEYFSQNMRPDITEKINDALGVLSGLGASI-DREVSLPH---- 302
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYE-------FKNNHGDWVTTVK---PDLGPGISERV 310
++ + A S A L RY+ + W K G + R+
Sbjct: 303 --TPYALAVYYILAPSEASANLSRYDGVKYGYSYNQTENMWEAMEKTRAKGFGSEVKRRI 360
Query: 311 WEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPP----PKLQMDP 361
SA D Q V+T + + + L+ PT P P KL DP
Sbjct: 361 MIGTYALSAGYYDAWYVKAQKVRTLISQEFNNAFEKYDALITPTTPNLPFSIGEKLN-DP 419
Query: 362 SALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
E++ ++ ++IAG+ VSIP G D LPV + ++ K +D ++ +
Sbjct: 420 --FEMYMCDTCTIPINIAGLPA---VSIPAGFVDGLPVGLQIIGKPFADQTIMRIAHAFQ 474
Query: 421 --NTLKEELQRM 430
T +E R+
Sbjct: 475 CATTWHKETPRL 486
>sp|B4RM85|GATA_NEIG2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
gonorrhoeae (strain NCCP11945) GN=gatA PE=3 SV=1
Length = 481
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 184/444 (41%), Gaps = 92/444 (20%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGVPVAYKDIFCQTGWRSACASKMLDNFVSPYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNK---- 263
S +R + + ++K G VK +P + + SEGN
Sbjct: 232 PK----DSTSFEREKEDYTRDLDKPLKG-----------VKIGLP--KEYFSEGNSTDVQ 274
Query: 264 -----------------------EQEYSIPSLAALSSAM--RLLQRY----------EFK 288
+ + SIP+ L+SA L RY +F
Sbjct: 275 TALQNTIDLLKAQGAEPVEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFG 334
Query: 289 NNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSA 337
+ + T G + R+ ++A AQK+ + V + + A +
Sbjct: 335 DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVADDFQTAFAR 392
Query: 338 LLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNL 396
+++ PT P PK+ D S +E + + +++ ++G +++P G L
Sbjct: 393 C----DLILAPTAPSAAPKIGADTSPVETYLSDIYTI--AVNLAGLPALTLPAGFSGGGL 446
Query: 397 PVAISLLAKHGSDGFLLNLVETLH 420
PV + L+ + ++ +L +
Sbjct: 447 PVGVQLVGNYFAEAKILGAAHQIQ 470
>sp|Q12VH1|GATA_METBU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcoides
burtonii (strain DSM 6242) GN=gatA PE=3 SV=1
Length = 475
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 187/429 (43%), Gaps = 44/429 (10%)
Query: 27 PLSGLTFAIKDIFDVDGHVT--------GFGNPDWARTHSAATSTAPAVLAVLSGGATSI 78
PL+G+ AIKD G T G+ P A + + GA I
Sbjct: 60 PLAGVPIAIKDNISTKGLATTCSSKILEGYVPP----------YDAHVIERLKEAGAVII 109
Query: 79 GKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSV 138
GKT MDE A + E+ YG NP +RVPGGSS GSA V A SLG+DTGGSV
Sbjct: 110 GKTNMDEFAMGTSTESSCYGVTLNPWDHERVPGGSSGGSAAVVAAGEAPISLGSDTGGSV 169
Query: 139 RVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLAD 194
R PA++CG+ G +P++ AVS G+I A S + +G A + +++ +G + +
Sbjct: 170 RCPAAFCGVVGLKPTYGAVSRYGLISYANSLEQIGPMATCVEDIAAVMDVIGGYDARDST 229
Query: 195 DVNLVRPSQVIFAEDCLQLS-SIPSDRVTQGLVKSVEKLFGGHIIE-NVILGDYVKDKVP 252
++ Q +D L +P + +G+ E I + + + K +P
Sbjct: 230 SIDKKIDHQAALIDDVKGLKIGVPDEYFGEGVDSGTENAVWDAINKYEEMDASWEKVSMP 289
Query: 253 SLQHFLSEGNKEQEYSIPSLAALSSAMRLL-QRYEFKNNHGDW----VTTVKPDLGPGIS 307
+ ++ L+ Y+I A S+ R RY +N+ +W T + G +
Sbjct: 290 NTKYALA-----AYYTIAMSEASSNLARFDGTRYGPRNDGENWHVMASKTRAENFGKEVQ 344
Query: 308 ERVW---EAVRTSAQKIDVCQS--VKTELRAALSALLGDHGILVIPTVPGPPPKL-QMDP 361
R+ A+ Q ++ V+T ++ + +L+ PT+P P K+ +M
Sbjct: 345 RRILLGTYALSAGYQDKYYLKALQVRTLVKQDFDRAFANFDVLMAPTMPLPAFKIGEMVE 404
Query: 362 SALEVFRARAFSL-LSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLH 420
L + ++ +++AGV C +S+P G D LPV + ++ H + L+ +
Sbjct: 405 DPLSQYLIDVNTVPMNLAGVP--C-ISVPCGSSDGLPVGLQIIGNHFDEAALIRAAYSFE 461
Query: 421 NTLKEELQR 429
R
Sbjct: 462 KNTDHHKAR 470
>sp|Q9RTA9|GATA_DEIRA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=gatA PE=3 SV=1
Length = 482
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
+ LPL+G+ +KD +V G T G+ A S T+TA L GA +GK
Sbjct: 61 AGETLPLAGVPIVVKDNINVTGTRTTCGSRMLANYVSPYTATAAQKLQ--GAGAVIVGKA 118
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE A + E+ G NP +RVPGGSS GSAVAV A + SLG+DTGGSVR P
Sbjct: 119 NMDEFAMGSSTESSASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQP 178
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
A+ CG++GF+P++ VS G++ A S D +G FA
Sbjct: 179 AALCGVYGFKPTYGRVSRYGLVAYASSLDQIGPFA 213
>sp|Q5F8U8|GATA_NEIG1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gatA PE=3
SV=1
Length = 481
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 185/452 (40%), Gaps = 108/452 (23%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT--------STAPAVLAVLSGGATSIG 79
L+G+ A KDIF G W R+ A+ TA V +L G ++G
Sbjct: 68 LTGVPVAYKDIFCQTG---------W-RSACASKMLDNFIFPYTATVVQNLLDEGMVTLG 117
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
+T MDE A EN YG NP P+ VPGGSS GSA V A+L +LG+DTGGS+R
Sbjct: 118 RTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIR 177
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
PAS+CGI G +P++ VS G++ A SFD G A Q A+D ++
Sbjct: 178 QPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMA--------------QTAEDCAIL 223
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLS 259
+ F S +R + + ++K G VK +P + + S
Sbjct: 224 LNAMAGFDPK----DSTSFEREKEDYTRDLDKPLKG-----------VKIGLP--KEYFS 266
Query: 260 EGNK---------------------------EQEYSIPSLAALSSAM--RLLQRY----- 285
EGN + + SIP+ L+SA L RY
Sbjct: 267 EGNSTDVQTALQNTIDLLKAQGAELVEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRY 326
Query: 286 -----EFKNNHGDWVTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKT 329
+F + + T G + R+ ++A AQK+ + V
Sbjct: 327 GHRAAQFGDLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVAD 384
Query: 330 ELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIP 389
+ + A + +++ PT P PK+ D S +E + + +++ ++G +++P
Sbjct: 385 DFQTAFARC----DLILAPTAPSAAPKIGADTSPVETYLSDIYTI--AVNLAGLPALTLP 438
Query: 390 LGLH-DNLPVAISLLAKHGSDGFLLNLVETLH 420
G LPV + L+ + ++ +L +
Sbjct: 439 AGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQ 470
>sp|Q1IUE4|GATA_KORVE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Koribacter
versatilis (strain Ellin345) GN=gatA PE=3 SV=1
Length = 480
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 183/429 (42%), Gaps = 55/429 (12%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+GL AIKD+ G T G+ A A V + + GA +GKT DE A
Sbjct: 71 LAGLPVAIKDVISTKGVRTTAGSKIL--EEFIAPYDATVVQKLEAAGAVILGKTNCDEFA 128
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ EN YG NP RVPGGSS GSA V A SLG+DTGGS+R PAS+CG+
Sbjct: 129 MGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGV 188
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIFA 207
G P++ VS G+I A S D +G FA D K ++L++ + P A
Sbjct: 189 VGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVKD----AAIMLEV---IAGRDPMDATSA 241
Query: 208 EDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKV-PSLQHFLSEGNK--- 263
E + S + +G+ V K + G ++ VK V S+Q+ G +
Sbjct: 242 EVAVPKYSDEIGKPVRGMKIGVAKEYFGEGLDP-----EVKASVEASIQNLAKAGAEIIE 296
Query: 264 ----EQEYSIPS--LAALSSAMRLLQRY----------EFKNNHGDWVTTVKPDLGPGIS 307
+Y+IP+ L A + A L R+ E K + + G +
Sbjct: 297 VSLPHTKYAIPTYYLVATAEASSNLARFDGVRYSHRSKEAKTLSEMYRKSRDEGFGAEVK 356
Query: 308 ERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPK 356
R+ ++A AQK V+T L +V PT P P K
Sbjct: 357 RRIILGTYALSAGYYDAYYLKAQK------VRTLLAQDFDEAFAKVDAIVTPTTPTPAFK 410
Query: 357 L-QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLG-LHDNLPVAISLLAKHGSDGFLLN 414
L + L ++ A F++ A + G +S+P G D LP+ + + AKH + ++
Sbjct: 411 LGEKADDPLAMYLADIFTV--TADLVGIPGISVPCGSSKDGLPIGLQVFAKHFQEATMIR 468
Query: 415 LVETLHNTL 423
+ + + L
Sbjct: 469 VAHAVEHAL 477
>sp|C4YRY0|GATA_CANAW Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Candida albicans (strain WO-1) GN=HER2 PE=3 SV=1
Length = 450
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 200/451 (44%), Gaps = 60/451 (13%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAV 67
+ + + V++P++S PLSG T+ +KD T + + S +T +
Sbjct: 21 WNSLISDLVVEPTNSTG--PLSGTTYIVKDNIATSHGYTTAASKILSNYESPFNATIIDL 78
Query: 68 LAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVD 127
L+ S G+ IGK+ +DE N ++ TNP +VPGGSS GSA +V K+
Sbjct: 79 LS--SNGSKLIGKSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCS 136
Query: 128 FSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGR 187
FS+GTDTGGSVR+PASYC +FGF+P++ +S GVIP AQ+ DTVG + I+ RV
Sbjct: 137 FSIGTDTGGSVRLPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYD 196
Query: 188 VLLQLADDVNLVRPSQV-----IFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVI 242
VL + D P +V ++ L + +P + V + L V + +
Sbjct: 197 VLNKYDDKDPTCLPEEVRQKIPTTKKETLTI-GVPHEFVLKELSADVRESW--------- 246
Query: 243 LGDYVKDKVPSLQHFLSEGN-KEQEYSIPS---LAALSSAMRLLQ----RYEFKNNHG-- 292
+Y K+ L H + + K + ++PS LA +A L + RY + N
Sbjct: 247 --EYALSKICKLGHLVKPISIKTIKKALPSYYTLATAEAASNLSRYDSIRYGYNTNESVN 304
Query: 293 ---DWVTTVKPD-LGPGISERV----WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGI 344
+ + T + D G + R+ + S ++ EL A S++ + +
Sbjct: 305 SPIELIATNRSDGFGSEVQRRILLGNYTLSSDSGDHYLRATQIREELCAEFSSIFNNSHV 364
Query: 345 LVIPTVPGPPPKLQMDPSAL-------EVFRARAFSLLSI---------AGVSGFCQVSI 388
L+ L M P++ E A + L+ A ++G +S+
Sbjct: 365 LLQDEQSSDKVDLIMAPTSTSTAPTWDEFVSANEKNFLNSYVNDVLTVPASLAGIPAISV 424
Query: 389 PLGLHDNLPVAISLLAKHGSDGFLLNLVETL 419
P+ + I L+ + G D +L L + +
Sbjct: 425 PVN-----GIGIQLMGQFGDDDLVLQLADQI 450
>sp|Q9JYZ9|GATA_NEIMB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup B (strain MC58) GN=gatA PE=3 SV=1
Length = 481
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 189/422 (44%), Gaps = 62/422 (14%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ A KDIF G + + S T+T V +L G ++G+T MDE A
Sbjct: 68 LTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATV--VQNLLDEGMVTLGRTNMDEFA 125
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
EN YG NP + VPGGSS GSA V A+L +LG+DTGGS+R PAS+CGI
Sbjct: 126 MGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF- 206
G +P++ VS G++ A SFD G A Q A+D ++ + F
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQTGPMA--------------QTAEDCAILLNAMAGFD 231
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFL----SEGN 262
+D L D T+ L + ++ L G E G+ D + +LQ+ + ++G
Sbjct: 232 PKDSTSLEREKED-YTRDLNQPLKGLKIGLPKEYFGEGNSA-DVLTALQNTIDLLKAQGA 289
Query: 263 K-------EQEYSIPSLAALSSAMRL--LQRY----------EFKNNHGDWVTTVKPDLG 303
+ + + SIP+ L+SA L RY +F + + T G
Sbjct: 290 ELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFG 349
Query: 304 PGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPG 352
+ R+ ++A AQK+ + V + + A + +++ PT P
Sbjct: 350 SEVKRRIMIGTYVLSHGYYDAYYLKAQKLR--RLVADDFQTAFARC----DLILAPTAPT 403
Query: 353 PPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-DNLPVAISLLAKHGSDGF 411
PK+ D S +E + + +++ ++G +++P G LPV + L+ + ++
Sbjct: 404 AAPKIGADASPVETYLSDIYTI--AVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAK 461
Query: 412 LL 413
+L
Sbjct: 462 IL 463
>sp|Q1J0C2|GATA_DEIGD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1
Length = 483
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 22 SAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKT 81
+ LPL+G+ +KD +V G T G+ A S +TA V + GA IGK
Sbjct: 61 AGETLPLAGVPIVVKDNLNVIGTRTTCGSRILANYVSPYDATA--VERLTGAGAVIIGKA 118
Query: 82 IMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVP 141
MDE A + E+ +G NP +RVPGGSS GSAVAV A L +LG+DTGGSVR P
Sbjct: 119 NMDEFAMGSSTESSAWGPTLNPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQP 178
Query: 142 ASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFA 176
A++ GI+G +P++ VS G++ A S D +G FA
Sbjct: 179 AAFTGIYGLKPTYGRVSRYGLVAYASSLDQIGPFA 213
>sp|C1D1L2|GATA_DEIDV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gatA
PE=3 SV=1
Length = 487
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 179/434 (41%), Gaps = 62/434 (14%)
Query: 24 HQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIM 83
LPL+G+ +KD +V G T G+ A S T+TA L + GA +GK M
Sbjct: 63 EALPLAGVPVIVKDNINVSGTRTTCGSRILATYVSPYTATAAQRL--IDAGAVIVGKANM 120
Query: 84 DEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPAS 143
DE A + E+ G NP RVPGGSS GSAVAV A L SLG+DTGGSVR PA+
Sbjct: 121 DEFAMGSSTESSASGPTLNPWDLSRVPGGSSGGSAVAVAANLTPVSLGSDTGGSVRQPAA 180
Query: 144 YCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQ 203
G++G +P++ VS G++ A S D +G FA A D+ L+
Sbjct: 181 LTGVYGLKPTYGRVSRYGLVAYASSLDQIGPFARS--------------AADLALLM--N 224
Query: 204 VIFAEDCLQLSSIPS-DRVTQGLVKSVEKLFGGHIIENVILGDYVKDKV--PSLQHFLSE 260
V+ D +S+ + R G + ++ L G I E++ D +L+ +
Sbjct: 225 VVAGHDPRDATSLEAPARFQAGAPEDLKGLRVGVIRESLGGNTSAVDAALNTTLEALRAG 284
Query: 261 GNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTVKPDLGPG--------------- 305
G E SIP L+ +A L+ E +N + V PG
Sbjct: 285 GATTGEVSIPDLSHAIAAYYLIAMPEASSNLARYDGMVYGQRAPGSDVSEVMTLTREHGF 344
Query: 306 --------------ISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVP 351
+S ++A + A K V+ + S ++ +LV PT P
Sbjct: 345 GREVQRRIMIGTYALSSGYYDAYYSKAMK------VRRLIAQEFSRAFQEYDVLVTPTSP 398
Query: 352 GPPPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLH-----DNLPVAISLLAKH 406
P + S A +++ ++G +SIP G LPV + +A
Sbjct: 399 FPAFRRGEKTSDPLAMYAADVDTVAV-NLAGLPAISIPAGFDLAEGGVRLPVGVQFIAPA 457
Query: 407 GSDGFLLNLVETLH 420
D L+ L L
Sbjct: 458 LKDELLVQLAGALE 471
>sp|Q58560|GATA_METJA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=gatA PE=3 SV=1
Length = 434
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 194/417 (46%), Gaps = 49/417 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ A + PL G +K +V+G+ + + A A + + G
Sbjct: 38 LEKDEKAKKKPLYGKIIVVKANINVEGYTISCASKTLE--NYIAPYDATVIEKIKENGGL 95
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG MDE A +GE ++G NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 96 IIGIANMDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVSADLCDMALGSDTGG 155
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R PAS+CG+ GF+PS+ VS G+ +A SFD +G L + A+D
Sbjct: 156 SIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGP--------------LTKTAEDA 201
Query: 197 NLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD-YVKDKV-PSL 254
L+ + +I +D +++ + + K ++ G + E + + D ++DKV ++
Sbjct: 202 LLL--TNIIKGKDLRDTTTVETKPFEK---KDIKGFKVGVVKEFMDVADEKIRDKVEKAI 256
Query: 255 QHFLSEGNKEQE-------------YSIPSLAALSSAMRLLQR---YEFKNNHGDWVTTV 298
+ F G + E Y I + SS R R Y+ + G+ V
Sbjct: 257 EVFKDLGCEIVELSYKYVDLALPTYYLINYVEFFSSTRRYDGRRYGYKIEEVCGEEVLR- 315
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
+ +G IS++ + S + + +R + ++ D I+V TVP P KL
Sbjct: 316 RIMIGSMISQKEY-----SGKYYKNALKARNLMRNEMIKIMKDVDIIVGATVPKLPHKLG 370
Query: 359 MDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLN 414
+ +E++ ++ +L++ A + G C +P G + +PV + + K D +L+
Sbjct: 371 EKLTPMEMY---SYDVLTVPANICGLCAGVVPCGDINGIPVGLQIQGKPFEDEKVLS 424
>sp|Q5AK64|GATA_CANAL Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=HER2 PE=3 SV=1
Length = 450
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 10/200 (5%)
Query: 8 YGAFMEKFVLQPSSSAHQLPLSGLTFAIKD-IFDVDGHVTGFGNPDWARTHSAATSTAPA 66
+ + + V++P++S PLSG T+ +KD I G+ T ++ S S A
Sbjct: 21 WNSLISDLVVEPTNSTG--PLSGTTYIVKDNIATSHGYTTAA-----SKILSNYESPFNA 73
Query: 67 VLAVL--SGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAK 124
++ L S G+ IGK+ +DE N ++ TNP +VPGGSS GSA +V K
Sbjct: 74 MIIDLLSSNGSKLIGKSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGK 133
Query: 125 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNR 184
+ FS+GTDTGGSVR+PASYC +FGF+P++ +S GVIP AQ+ DTVG + I+ R
Sbjct: 134 MCSFSIGTDTGGSVRLPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKR 193
Query: 185 VGRVLLQLADDVNLVRPSQV 204
V VL + D P +V
Sbjct: 194 VYDVLNKYDDKDPTCLPEEV 213
>sp|Q5WVW0|GATA_LEGPL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Lens) GN=gatA PE=3 SV=1
Length = 483
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 187/411 (45%), Gaps = 38/411 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD+F T + A A A V GA IGKT MDE
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN ++G+ NP +RVPGGSS GSA AV LV F++G+DTGGS+R PA++CG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P++ VS G++ A S D G FA + L + + D + +VI
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGF-DSKDSTSADRVI- 241
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE----GN 262
D P D++ GL F + + + D + D V ++ +E
Sbjct: 242 -PDYSTEIKKPVDKIRIGLPSC---FFQPQVEKGI--QDAIHDAVKLFENLGAEIIEIDL 295
Query: 263 KEQEYSIPS--LAALSSAMRLLQRYE-FKNNHG--------DWVTTVKPD-LGPGISERV 310
K Q +P + A + A L RY+ + H + +T + + G + R+
Sbjct: 296 KLQPLWVPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRI 355
Query: 311 WEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM---DPS 362
S+ D Q V+ +R L +L +++ PT P KL DP
Sbjct: 356 LTGTHVLSSGFFDAYYLHAQKVRRLIRDELITILNSVDVILGPTTPTTAFKLGEKIDDP- 414
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
++ + A F++ A ++G +SIP G + LP+ + L+ KH S+ LL
Sbjct: 415 -IQNYLADVFTV--AANLAGLPAISIPTGFENKLPIGLQLMGKHFSENRLL 462
>sp|Q6LX43|GATA_METMP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain S2 / LL) GN=gatA PE=3 SV=1
Length = 431
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 185/404 (45%), Gaps = 47/404 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + + PL G A+K +V G+ + + T A V + S GA
Sbjct: 36 LEKNDTLKNKPLYGKIVAVKSNINVKGYKISCASKTLEKY--VGTYDATVVKKLRSQGAL 93
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+G T MDE A +GE YG NP A DR+PGGSSSGSA AV A L D ++G+DTGG
Sbjct: 94 IVGMTNMDEFAGGSSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGG 153
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRVGRVLLQLA 193
S+R PAS+CGI GF+PS+ VS G+ +A SFD +G A D +L + + +
Sbjct: 154 SIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKG-IDRS 212
Query: 194 DDVNLVRPSQVIFAEDCL---------QLSSIPSDRVTQGLVKSVE--KLFGGHIIENVI 242
D +L P F + + + + +++ + K +E K G I++ +
Sbjct: 213 DSTSLETPK---FEKKDISNYKIGVVKEFMDVTDEKIRNEIEKGIEVFKDMGCKIVD--L 267
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLL--QRY-EFKNNHGDWVTTVK 299
Y+ +P+ Y + + SA R +RY EF +
Sbjct: 268 SYKYIDLALPT-------------YYLINYVEFFSATRKYDGRRYGEFIEEACGEEVLRR 314
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
+G ISE+ + + + + +S+K E+ L ++V PTVP P KL
Sbjct: 315 ILIGKHISEQEFSG-KYYKKALQARKSMKKEML----GLFNSADLIVGPTVPKLPHKLGE 369
Query: 360 DPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISL 402
D S +E++ A+ +L++ + G C + G +PV + +
Sbjct: 370 DVSPMEMY---AYDVLTVPTNICGICSGVVRCGNISGVPVGLQI 410
>sp|O27540|GATA_METTH Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=gatA PE=3 SV=1
Length = 454
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 178/363 (49%), Gaps = 49/363 (13%)
Query: 78 IGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGS 137
IG T MDE A + E +G NP AP R+PGGSS GSA AV A + D +LG+DTGGS
Sbjct: 117 IGMTNMDEFAAGSSTETSFFGPTDNPAAPGRIPGGSSGGSAAAVAAGMCDLALGSDTGGS 176
Query: 138 VRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVL-------- 189
+R PAS+CG+ GF+P++ AVS G++ +A SFD +G A D ++ V+
Sbjct: 177 IRNPASHCGVMGFKPTYGAVSRQGLLDLAMSFDQIGPLAADVSGISLALDVISGYDPADP 236
Query: 190 --LQLADDVNLVRPSQ---VIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILG 244
L + D+ + R + V + L+++ D V QG + ++E G I+E + G
Sbjct: 237 TTLDSSPDLEVERELKGLRVGVVREFLEVTDEAIDEVIQGKLGAMED-EGAEIVE-LDFG 294
Query: 245 DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV------ 298
Y+ +P+ Y + + SA R +Y+ + +G + V
Sbjct: 295 -YIDLCLPT-------------YYLINYVEFFSATR---KYDGR-KYGHRIEDVCGSEVL 336
Query: 299 -KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL 357
+ +G IS++ S + ++ +R ++ LL I+ PTVP P L
Sbjct: 337 RRIHMGSYISQK-----ELSGKYYKRALQARSLIRREITGLLSHVDIIAGPTVPKLPHTL 391
Query: 358 QMDPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLV 416
+ +E++ A+ +L+ IA ++G SIP G +PV + L AK G DG +++ +
Sbjct: 392 GEELEPMEMY---AYDVLTVIANLAGIPAASIPAGDVGGVPVGLQLQAKPGDDGMIVSAM 448
Query: 417 ETL 419
+
Sbjct: 449 REI 451
>sp|A5ICP2|GATA_LEGPC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Corby) GN=gatA PE=3 SV=1
Length = 483
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 181/411 (44%), Gaps = 38/411 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD+F T + A A A V GA IGKT MDE
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN ++G+ NP +RVPGGSS GSA AV LV F++G+DTGGS+R PA++CG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P++ VS G++ A S D G FA + L + + D + +VI
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGF-DSKDSTSVDRVI- 241
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE----GN 262
D P D++ GL F + + + D + D V ++ +E
Sbjct: 242 -PDYSAEIKKPVDKIRIGLPSC---FFQPQVEKGI--QDAIHDAVKLFENLGAEIIEIDL 295
Query: 263 KEQEYSIPS--LAALSSAMRLLQRYE-FKNNH-----GDWVTTVKPDLGPGISERVWEAV 314
K Q +P + A + A L RY+ + H + + G V +
Sbjct: 296 KLQPLWVPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRI 355
Query: 315 RTSAQKIDV---------CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM---DPS 362
T + Q V+ +R L L +++ PT P KL DP
Sbjct: 356 LTGTHVLSTGFFNAYYLHAQKVRRLIRDELITTLNSVDVIIGPTTPTTAFKLGEKINDP- 414
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
++ + A F++ A ++G +SIP G + LP+ + L+ KH S+ LL
Sbjct: 415 -IQNYLADVFTV--AANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>sp|Q5X4H5|GATA_LEGPA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Paris) GN=gatA PE=3 SV=1
Length = 483
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 185/417 (44%), Gaps = 50/417 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD+F T + A A A V GA IGKT MDE
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN ++G+ NP +RVPGGSS GSA AV LV F++G+DTGGS+R PA++CG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFA---------------WDPKILNRVGRVLLQ 191
I G +P++ VS G++ A S D G FA +D K V RV+
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVIPD 243
Query: 192 LADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKV 251
+ ++ I C + ++ Q + + KLF EN LG + +
Sbjct: 244 YSAEIKKPVDKIRIGLPSCFFQPQV--EKGIQDAIHNAVKLF-----EN--LGAEIIEID 294
Query: 252 PSLQHFLSEGNKEQEYSIPSLAALSS------AMRLLQRYEFKNNHGDWVTTVKPD-LGP 304
LQ F Y + + A SS +R R + + + +T + + G
Sbjct: 295 LKLQPFWVPC-----YYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGN 349
Query: 305 GISERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
+ R+ S+ D Q V+ +R L L +++ PT P KL
Sbjct: 350 EVKRRILTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLGE 409
Query: 360 ---DPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
DP ++ + A F++ A ++G +SIP G + LP+ + L+ KH S+ LL
Sbjct: 410 KINDP--IQNYLADVFTV--AANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>sp|Q971U6|GATA_SULTO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=gatA PE=3 SV=2
Length = 472
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 197/441 (44%), Gaps = 84/441 (19%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGN---PDWARTHSAATSTAPAVLAVLSGGATSIGKTIMD 84
LSG+ AIKD G T + D+ + A + + GA +GKT MD
Sbjct: 61 LSGILIAIKDNISTKGIRTTCASRMLEDYVPPYDATV-----IEKLKQEGAVILGKTNMD 115
Query: 85 EMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASY 144
E A E ++G NP +R PGGSS GS A+ A +VD +LG+DTGGS+R PA+Y
Sbjct: 116 EFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGIVDIALGSDTGGSIRAPAAY 175
Query: 145 CGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLL-------------- 190
+FG +PS+ VS G++ A S + +G A + + L + ++
Sbjct: 176 NAVFGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLALLYSIISGDDPKDATTIHFEP 235
Query: 191 QLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFG-GHIIENVILGDYVKD 249
Q+ + V L + ++ +D ++ S P V +++KL G II+ V LG
Sbjct: 236 QVPEKVEL-KDVKIAVLKDIVEASDKP---VVSIFNSTLDKLSSEGAIIKEVNLG----- 286
Query: 250 KVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQRYE------FKNNHGDWVTTVKPD 301
EY++P+ + A+S A L R++ K + G+W T +
Sbjct: 287 --------------YAEYALPAYYIIAMSEASSNLARFDGVRYGYSKYSEGNWRETFAKN 332
Query: 302 LGPG----ISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILV 346
G G + R+ +E A KI + ++ + +L + ++
Sbjct: 333 RGEGFGIEVKRRILLGSFILSAGYYEEFYIKALKI------RRLIKDNVDNILKEFDLIA 386
Query: 347 IPTVPGPPPKL---QMDPSALEVFRARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISL 402
PT+P PPK+ DP + A L + IA ++G +S P G ++NLP+ + L
Sbjct: 387 SPTMPILPPKIGEVVEDP-----IKMYAMDLNTVIANLAGVPALSQPAGFYNNLPIGLQL 441
Query: 403 LAKHGSDGFLLNLVETLHNTL 423
+ ++ SD +++ + + L
Sbjct: 442 MGRYLSDYYIMAISAKIEKVL 462
>sp|A4FW11|GATA_METM5 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=gatA PE=3
SV=1
Length = 431
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 184/404 (45%), Gaps = 47/404 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + PL G A+K +V G+ + + T A V + S GA
Sbjct: 36 LEKNDDLKNKPLYGKIVAVKSNINVKGYKISCASKTLEKY--VGTYDATVVKKLRSQGAL 93
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+G T MDE A +GE YG NP A DR+PGGSSSGSA AV A L D ++G+DTGG
Sbjct: 94 IVGMTNMDEFAGGSSGETSCYGPTKNPAALDRIPGGSSSGSAAAVAADLCDMAIGSDTGG 153
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRVGRVLLQLA 193
S+R PAS+CGI GF+PS+ VS G+ +A SFD +G A D +L + + +
Sbjct: 154 SIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKG-IDRS 212
Query: 194 DDVNLVRPSQVIFAEDCL---------QLSSIPSDRVTQGLVKSVE--KLFGGHIIENVI 242
D +L P F + + + + +++ + K +E K G I++ +
Sbjct: 213 DSTSLETPK---FEKKDISNYKVGVVKEFMDVTDEKIRNEIEKGIEVFKDMGCKIVD--L 267
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLL--QRY-EFKNNHGDWVTTVK 299
Y+ +P+ Y + + SA R +RY EF +
Sbjct: 268 SYKYIDLALPT-------------YYLINYVEFFSATRKYDGRRYGEFIEEACGEEVLRR 314
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
+G ISE+ + + + + +S+K E+ L ++V PTVP P KL
Sbjct: 315 ILIGKHISEQEFSG-KYYKKALQARKSMKKEML----GLFNSADLIVGPTVPKLPHKLGE 369
Query: 360 DPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISL 402
D S +E++ A+ +L++ + G C + G +PV + +
Sbjct: 370 DLSPMEMY---AYDVLTVPTNICGICSGVVRCGNISGVPVGLQI 410
>sp|C1F857|GATA_ACIC5 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=gatA PE=3 SV=1
Length = 476
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 191/435 (43%), Gaps = 62/435 (14%)
Query: 25 QLPLSGLTFAIKDIFDVDGH--------VTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
+LP+ G+ F IKD+ V+G + G+ P TA AV ++ GA
Sbjct: 66 KLPMGGVPFGIKDVLTVEGMPATASSKILEGYRPP----------YTATAVQRLIDAGAV 115
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+GK DE A + EN YG NP A DRVPGGSS GSA AV A + +LGTDTGG
Sbjct: 116 LVGKLNCDEFAMGSSNENSAYGPVKNPRALDRVPGGSSGGSAAAVAANMAVATLGTDTGG 175
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDV 196
S+R PAS+CG+ G P++ VS G+I A S D VG FA + V V+ D
Sbjct: 176 SIRQPASFCGVVGVLPTYGRVSRYGLIAFASSLDRVGPFAHTVRDAAEVLGVI--AGHDP 233
Query: 197 NLVRPSQVIFAEDCLQLSS--------IPSDRVTQGLVKSVEKLFGGHIIENVILGDYVK 248
S V + +L + +P++ +GL V++ G I + G VK
Sbjct: 234 MDATSSSVPVPDYTEKLDAGVKGLRLGVPAEYFAEGLDPEVKRAVEGTIEQLRAAGAEVK 293
Query: 249 DKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ-------RYEFKNNHGDWVTTV--- 298
SL H Y+IP+ +++A RY + + + +
Sbjct: 294 PI--SLPH--------TPYAIPTYYVIATAEASANLARFDGVRYGLRAPEANTLAAMYRQ 343
Query: 299 KPDLGPG--ISERVWEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVP 351
DLG G + R+ SA D Q V+ L + +V PT P
Sbjct: 344 TRDLGFGAEVKRRILLGTYVLSAGYYDAYYKKAQQVRRLLAQDFLRAFEEVDAIVTPTAP 403
Query: 352 GPPPKL-QMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGL-HDNLPVAISLLAKHGSD 409
P KL + L ++ A +++ A ++G C S+P G + LP+ I +L +H +
Sbjct: 404 TPAFKLGEKSDDPLSMYLADIYTV--TANLAGICGASVPCGTSREGLPIGIQILGRHFDE 461
Query: 410 GFLLNL---VETLHN 421
+L + VE+L
Sbjct: 462 ATVLRVGQAVESLQK 476
>sp|A6VH97|GATA_METM7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=gatA PE=3
SV=1
Length = 431
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 186/404 (46%), Gaps = 47/404 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + + PL G A+K +V G+ + + T A V + S GA
Sbjct: 36 LEKNDALKNKPLYGKIVAVKSNINVKGYKISCASKTL--DNYIGTYDATVVKKLRSQGAL 93
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+G T MDE A +GE ++G NP A DR+PGGSSSGSA AV A L D ++G+DTGG
Sbjct: 94 IVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGG 153
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRVGRVLLQLA 193
S+R PAS+CGI GF+PS+ VS G+ +A SFD +G A D +L + + +
Sbjct: 154 SIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKG-IDRS 212
Query: 194 DDVNLVRPSQVIFAEDCL---------QLSSIPSDRVTQGLVKSVE--KLFGGHIIENVI 242
D +L P F + + + + +++ + K +E K G I++ +
Sbjct: 213 DSTSLETPK---FEKKDISNYKVGVVKEFMDVTDEKIRNEIEKGIEVFKDMGCKIVD--L 267
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLL--QRY-EFKNNHGDWVTTVK 299
Y+ +P+ Y + + SA R +RY EF +
Sbjct: 268 SYKYIDLALPT-------------YYLINYVEFFSATRKYDGRRYGEFIEEACGEEVLRR 314
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
+G ISE+ + + + + +S+K E+ L ++V PTVP P KL
Sbjct: 315 ILIGKHISEQEFSG-KYYKKALQARKSMKKEML----GLFNSADLIVGPTVPKLPHKLGE 369
Query: 360 DPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISL 402
+ S +E++ A+ +L++ + G C + G +PV + +
Sbjct: 370 NLSPMEMY---AYDVLTVPTNICGICSGVVRCGNISGVPVGLQI 410
>sp|Q4J965|GATA_SULAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=gatA PE=3 SV=1
Length = 476
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 183/400 (45%), Gaps = 65/400 (16%)
Query: 64 APAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGA 123
A V + S GA IGKT MDE A E ++G NP +R PGGSS GS +
Sbjct: 95 ATVVEKLKSEGAVIIGKTNMDEFAMGSTTETSYFGPTKNPWDLERTPGGSSGGSGAVLAG 154
Query: 124 KLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILN 183
+V+ +LG+DTGGS+R PA++ G+FG +PS+ VS G+I A S + +G A + + L
Sbjct: 155 GIVELALGSDTGGSIRAPAAFNGVFGLKPSYGTVSRYGLIAYANSLEQIGPMAKNAEDLE 214
Query: 184 RVGRVL----LQLADDVNL--------------VRPSQVIFAEDCLQLSSIPSDRVTQGL 225
+ V+ + A +++ ++ ++ +D L+ S P VT
Sbjct: 215 LLYDVIAGEDWRDATTISINKNEYKRDGSSKVDLKNIKIAVLKDILEASEKP---VTSAF 271
Query: 226 VKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSEGNKEQEYSIPS--LAALSSAMRLLQ 283
+ ++KL + E V + DY++ K+ EY++P+ + A+S A L
Sbjct: 272 NEILDKL----VSEGVSI-DYIEFKLA-------------EYALPAYYIIAMSEASSNLA 313
Query: 284 RYE------FKNNHGDWVTTVKPDLGPGISERVWEAVRTSA---------QKIDVCQSVK 328
R++ + G W T + G G V + + Q V+
Sbjct: 314 RFDGVRYGYSAHYDGIWKDTYGKNRGEGFGIEVKRRIMLGSFILSAGYYEQYYIKALKVR 373
Query: 329 TELRAALSALLGDHGILVIPTVPGPPPKLQM---DPSALEVFRARAFSLLS-IAGVSGFC 384
++ + +L + + PT+P PPKL DP + A L + IA ++G
Sbjct: 374 RLIKDEIDRILKQYDFIASPTMPIIPPKLGEVVGDP-----LKMYAMDLNTVIANLAGVP 428
Query: 385 QVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHNTLK 424
+S P+G ++NLP+ + L+ + SD L+N+ + + K
Sbjct: 429 ALSQPIGFYNNLPIGLQLMGSYLSDYKLINISKNIEKISK 468
>sp|Q2FQM9|GATA_METHJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1
Length = 431
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 194/440 (44%), Gaps = 56/440 (12%)
Query: 12 MEKFVLQPSSSAHQL------------PLSGLTFAIKDIFDVDGHVT--------GFGNP 51
M+K P S H PLSG+T A+KD G T G+ P
Sbjct: 1 MKKLTFHPDDSVHAFITTIPEVTYGDGPLSGVTVAVKDNISTKGIETTCASKILKGYIPP 60
Query: 52 DWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPG 111
A V + + GA +GKT MDE EN YG NP RVPG
Sbjct: 61 ----------YDAHVVTLLKNAGAAIVGKTNMDEFGMGTTTENSAYGPTLNPLDHQRVPG 110
Query: 112 GSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDT 171
GSS GSA AV A LVD ++G+DTGGS+R PA++CGI G +P++ VS G+I A S +
Sbjct: 111 GSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAFCGIVGLKPTYGRVSRFGLIAYANSLEQ 170
Query: 172 VGWFAWDPKILNRVGRVLL--QLADDVNLVRPSQVIFAEDCLQLS-SIPSDRVTQGLVKS 228
+G A D + L+ + V+ D ++ +P + D L +P + +G+ +
Sbjct: 171 IGPMARDVQTLSNLYSVIAGHDSRDATSVDKPYKHNPVSDITGLKIGVPDEFFGEGVNPN 230
Query: 229 VEKLFGGHIIENVILG-DYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RY 285
V ++ I +G V +PS+++ LS Y + + SS + RY
Sbjct: 231 VAEVVRQAIDTLESMGATAVPCTIPSMKYALS------AYYVTCTSEASSNLARFDGVRY 284
Query: 286 -----EFKNNHGDWVTTVKPDLGPGISERVWEAVRTSA-----QKIDVCQSVKTELRAAL 335
K+ H + K G + R+ + A + Q+ + +R
Sbjct: 285 GPAVGTLKSWHDAYSEQRKAGFGKEVRRRIILGTFSLAAGYYGRYYQKAQTARQMVRDDF 344
Query: 336 SALLGDHGILVIPTVPGPPPKLQMDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHD 394
+ D ++ PT+P KL L+++ + +L++ A ++G +S+P G +
Sbjct: 345 ERIFRDVDVIAGPTMPDIAFKLGEKSDPLQMYLS---DILTVPANLAGVPALSVPCGKIN 401
Query: 395 NLPVAISLLAKHGSDGFLLN 414
++PV + L+ ++ D +++
Sbjct: 402 SMPVGLQLIGRYFEDERIID 421
>sp|A9A9F2|GATA_METM6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=gatA PE=3
SV=1
Length = 431
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 181/404 (44%), Gaps = 47/404 (11%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + PL G A+K +V G+ + + T A V + GA
Sbjct: 36 LEKNDYLKNKPLYGKIVAVKSNINVKGYKISCASKTLEKY--TGTYDATVVKKLRLQGAL 93
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
+G T MDE A +GE ++G NP A DR+PGGSSSGSA AV A L D ++G+DTGG
Sbjct: 94 IVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGG 153
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRVGRVLLQLA 193
S+R PAS+CGI GF+PS+ VS G+ +A SFD +G A D +L + + +
Sbjct: 154 SIRNPASHCGIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKG-IDRS 212
Query: 194 DDVNLVRPSQVIFAEDCL---------QLSSIPSDRVTQGLVKSVE--KLFGGHIIENVI 242
D +L P F + + + + +++ + K +E K G I++ +
Sbjct: 213 DSTSLETPK---FEKKDISNYKVGVVKEFMDVTDEKIRNEIEKGIEVFKDMGCKIVD--L 267
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLL--QRY-EFKNNHGDWVTTVK 299
Y+ +P+ Y + + SA R +RY EF +
Sbjct: 268 SYKYIDLALPT-------------YYLINYVEFFSATRKYDGRRYGEFIEEACGEEVLRR 314
Query: 300 PDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM 359
+G ISE+ + S + + ++ + L ++V PTVP P KL
Sbjct: 315 ILIGKHISEQEF-----SGKYYKKALQARKAMKKEMLGLFNSADLIVGPTVPKLPHKLGE 369
Query: 360 DPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISL 402
D S +E++ A+ +L++ + G C + G +PV + +
Sbjct: 370 DLSPMEMY---AYDVLTVPTNICGICSGVVRCGNIQGVPVGLQI 410
>sp|A6UQF6|GATA_METVS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatA
PE=3 SV=1
Length = 431
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 185/405 (45%), Gaps = 49/405 (12%)
Query: 17 LQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGAT 76
L+ + L G A+K +V+G+ + + T A + + S GA
Sbjct: 36 LEKNEKLKNKSLYGKIIAVKSNINVEGYKISCASKTL--DNYTGTYDATVIKKLRSEGAL 93
Query: 77 SIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGG 136
IG T MDE A +GE +YG NP A DR+PGGSSSGSA AV A L D +LG+DTGG
Sbjct: 94 IIGMTNMDEFASGSSGETSYYGPTKNPKALDRIPGGSSSGSAAAVSADLCDMALGSDTGG 153
Query: 137 SVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWF---AWDPKILNRVGRVLLQLA 193
S+R PAS+CG+ GF+P++ VS G+ +A SFD +G A D L V + L L+
Sbjct: 154 SIRNPASHCGVVGFKPTYGVVSRQGLCDLAMSFDQIGPLTKTAEDSLNLTNVIKG-LDLS 212
Query: 194 DDVNLVRPSQVIFAEDCL---------QLSSIPSDRVTQGLVKSVE--KLFGGHIIENVI 242
+ +L P F + + + + +++ + K +E + G I++ +
Sbjct: 213 NTTSLKTPK---FEKKEIKDYKIGVVREFMDVTDEKIRNEIEKGIEVFRDLGCEIVD--L 267
Query: 243 LGDYVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEF----KNNHGDWVTTV 298
Y+ +P+ Y + + SA R F + G+ V
Sbjct: 268 SYKYIDLALPT-------------YYLINYVEFYSATRKYDGRRFGEVIEEACGEEVLR- 313
Query: 299 KPDLGPGISERVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQ 358
+ +G ISE+ + S + + E++ + L ++V PTVP P K+
Sbjct: 314 RILIGKHISEQEF-----SGKYYKKALQARKEMKKEMIGLFNSVDLIVGPTVPKLPHKIG 368
Query: 359 MDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAISL 402
+ S +E++ A+ +L++ + G C + G + +PV + +
Sbjct: 369 EELSPMEMY---AYDVLTVLTNICGICSGVVGCGNINGIPVGLQI 410
>sp|B8D125|GATA_HALOH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halothermothrix
orenii (strain H 168 / OCM 544 / DSM 9562) GN=gatA PE=3
SV=1
Length = 477
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 194/444 (43%), Gaps = 74/444 (16%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
L+G+ AIKD G T + +T V + G ++GKT MDE A
Sbjct: 63 LAGIPLAIKDNISTRGIKTTCSSKILNNYKPPYDATV--VKRLKEEGGITLGKTNMDEFA 120
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ EN + NP D PGGSS GSA AV A +LG+DTGGS+R PA++CG+
Sbjct: 121 MGSSTENSGFYPTHNPWNLDHAPGGSSGGSAAAVAAGEAPGALGSDTGGSIRQPAAFCGV 180
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFA---------------WDPKILNRVGR----V 188
G +P++ VS G++ A S D +G DP V R
Sbjct: 181 VGLKPTYGCVSRYGLVAFASSLDQIGPITKDVTDSALLLNVISGHDPMDSTSVDREKEDY 240
Query: 189 LLQLADDVNLVR---PSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGD 245
L DDV ++ P + L +S D+V VK +EK G I+E V L
Sbjct: 241 TTYLKDDVKGMKIGLPEEYF----SLDFNSEVKDKVMSA-VKELEK--AGAIVEEVSL-- 291
Query: 246 YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQ--RYEFKNNHGD-----WVTTV 298
P++++ L+ Y I + A SS + RY +++ +GD + T
Sbjct: 292 ------PNIEYALA------AYYIIAPAEASSNLARYDGVRYGYRSENGDSVRSMFTNTR 339
Query: 299 KPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVI 347
G + R+ ++A AQK V+T ++ + D+ +L+
Sbjct: 340 SEGFGDEVKRRIMLGTYVLSSGYYDAFYLKAQK------VRTLIKEDFERVFKDYDVLIS 393
Query: 348 PTVPGPPPKLQMDPSALEVFRARAFSL-LSIAGVSGFCQVSIPLGLH-DNLPVAISLLAK 405
PT P KL LE++++ F++ ++IAG+ +S+P G +NLP+ + ++
Sbjct: 394 PTTPTTAFKLGEMTDPLEMYQSDVFTVPVNIAGIPA---ISVPCGFDSNNLPIGLQIMGP 450
Query: 406 HGSDGFLLNLVETLHNTLKEELQR 429
H +G +L TL L + +R
Sbjct: 451 HFGEGKILQTAYTLEQALNMKTKR 474
>sp|A5UMN0|GATA_METS3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=gatA PE=3
SV=1
Length = 456
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 194/414 (46%), Gaps = 45/414 (10%)
Query: 28 LSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMA 87
LSGL F IK +V+ ++ + + +T + +L+ +G T MDE A
Sbjct: 66 LSGLVFGIKANINVEDYIISAASKTLDNYFGSYNATV--IDKILAQDGIILGITNMDEFA 123
Query: 88 YSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGI 147
+ E +G NP AP R+PGGSS GSA AV A++ D +LG+DTGGS+R PAS+CG+
Sbjct: 124 AGSSTETSCFGPTQNPAAPGRIPGGSSGGSAAAVAAEMCDIALGSDTGGSIRNPASHCGV 183
Query: 148 FGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK----ILNRVGRVLLQLADDVNLVRPSQ 203
GF+P++ AVS G++ ++ S D +G + D LN + ++ RP
Sbjct: 184 VGFKPTYGAVSRQGLLDLSMSLDQIGPLSNDTSGIALALNAISDYDETECTTLHGKRPDF 243
Query: 204 VIFAED----------CLQLSSIPSDRVTQGLVKSVEKLF--GGHIIENVILGDYVKDKV 251
E+ C + + + + K++ KL G ++E + D + +
Sbjct: 244 TSALEEKSLEGMKIAVCKEFIDVTDAEINVAVNKAIHKLVEAGAELVE--VSFDNIDLCL 301
Query: 252 PSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQR---YEFKNNHGDWVTTVKPDLGPGISE 308
P+ Y I + S+ + R Y ++ G+ V + ++G IS+
Sbjct: 302 PTY------------YLINYVEFFSATRKYDGRDYGYRIEDVCGEEVLR-RIEIGSYISQ 348
Query: 309 RVWEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQMDPSALEVFR 368
+ + S + ++ +R ++A+L + ++V PTVP P K+ + + +E++
Sbjct: 349 KEY-----SGKFYKKALQARSLIRDEINAMLENVDLIVGPTVPKLPHKIGDELTPMEMY- 402
Query: 369 ARAFSLLS-IAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNLVETLHN 421
A+ +L+ IA ++G SI G D +PV + + AK D ++ + N
Sbjct: 403 --AYDVLTVIANLAGIPAGSIKAGEVDGIPVGLQIQAKPLDDLKIIKAMSVFEN 454
>sp|Q5ZUQ7|GATA_LEGPH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=gatA PE=3 SV=1
Length = 483
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 186/411 (45%), Gaps = 38/411 (9%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL+G+ A+KD+F T + A A A V GA IGKT MDE
Sbjct: 66 PLTGIPMALKDLFCTKRLNTTCASKMLANFQ--APYDATIVTKFKQNGAIIIGKTNMDEF 123
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A + EN ++G+ NP +RV GGSS GSA AV LV F++G+DTGGS+R PA++CG
Sbjct: 124 AMGSSNENSYFGSVKNPWDRERVSGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFCG 183
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLVRPSQVIF 206
I G +P++ VS G++ A S D G FA + L + + D + +VI
Sbjct: 184 ISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAGF-DSKDSTSVDRVI- 241
Query: 207 AEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKDKVPSLQHFLSE----GN 262
D P D++ GL F + + + D + D V ++ +E
Sbjct: 242 -PDYSAEIKNPVDKIRIGLPSC---FFQPQVEKGI--QDAIHDAVKLFENLGAEIIEIDL 295
Query: 263 KEQEYSIPS--LAALSSAMRLLQRYE-FKNNHG--------DWVTTVKPD-LGPGISERV 310
K Q +P + A + A L RY+ + H + +T + + G + R+
Sbjct: 296 KLQPLWVPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRI 355
Query: 311 WEAVRT-SAQKIDV----CQSVKTELRAALSALLGDHGILVIPTVPGPPPKLQM---DPS 362
S+ D Q V+ +R L L +++ PT P KL DP
Sbjct: 356 LTGTHVLSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLGEKIDDP- 414
Query: 363 ALEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLL 413
++ + A F++ A ++G VSIP G + LP+ + L++KH S+ LL
Sbjct: 415 -IQNYLADVFTV--AANLAGLPAVSIPTGFENKLPIGLQLMSKHFSENRLL 462
>sp|Q9LCX3|GATA_THET8 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gatA
PE=1 SV=2
Length = 471
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 196/440 (44%), Gaps = 52/440 (11%)
Query: 5 DSDYGAFM---EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
D GAF+ E+ + + + LPL+GL A+KD G T G+
Sbjct: 32 DPGLGAFLSLNERLLEEAEAVDPGLPLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYE 91
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
+TA A L L GA +GKT +DE + E+ + NP PDRVPGGSS GSA A+
Sbjct: 92 ATAVARLKAL--GALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAAL 149
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
A L +LG+DTGGSVR PA++CG++G +P++ VS G+I A S D +G A
Sbjct: 150 AADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMA----- 204
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
R R L L D P D L P R + L + L G ++
Sbjct: 205 --RSVRDLALLMDAAAGPDPL------DATSLDLPP--RFQEALEGPLPPLRLG-VVREA 253
Query: 242 ILGD---YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
+ G+ + +L+ F G +E S PSL +A +L E +N + T+
Sbjct: 254 LAGNSPGVERALEEALKVFRELGLSVREVSWPSLPQALAAYYILAPAEASSNLARYDGTL 313
Query: 299 KPDLGPGIS-ERVWEAVRT-----SAQKIDV----------------CQSVKTELRAALS 336
G E + EA R +++ V Q+ + L+A
Sbjct: 314 YGRRAAGEEVEGMMEATRALFGLEVKRRVLVGTFVLSSGYYEAYYGRAQAFRRRLKAEAQ 373
Query: 337 ALLGDHGILVIPTVPGP--PPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSIPLGLHD 394
AL + +L++PT P P P + DP L ++R +++ A ++G +S P G
Sbjct: 374 ALFREVDLLLLPTTPHPAFPFGARRDP--LAMYREDLYTV--GANLTGLPALSFPAGFEG 429
Query: 395 NLPVAISLLAKHGSDGFLLN 414
+LPV + LLA G D LL
Sbjct: 430 HLPVGLQLLAPWGEDERLLR 449
>sp|Q4ZNS7|GATA_PSEU2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
syringae pv. syringae (strain B728a) GN=gatA PE=1 SV=1
Length = 483
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 187/419 (44%), Gaps = 50/419 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G A KD+F G T G+ + A A V + S G ++GKT MDE
Sbjct: 67 PLLGAPLAHKDLFCTQGIRTSCGS--LMLDNFKAPYDATVVSRLASAGTVTLGKTNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E+ HYG NP + VPGGSS GSA AV A+L+ + GTDTGGS+R PA+
Sbjct: 125 AMGSANESSHYGAVKNPWNLECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTN 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK--ILNRVGRVLLQLADDVNLVRPSQV 204
+ G +P++ VS G+I A S D G A + L G D ++ P
Sbjct: 185 LTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSIDEPVPD 244
Query: 205 IFAEDCLQLS----SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLS 259
A L +P + + GL + +L + E LG VK+ +P+LQH +
Sbjct: 245 YSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVRELEKLGAIVKEVSLPNLQHAIP 304
Query: 260 EGNKEQEYSIPSLAALSSAM------RLLQRYEFKNNHGDWVTTVKPD-LGPGISERV-- 310
Y + + A SS + R R E + D + + GP + R+
Sbjct: 305 ------AYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358
Query: 311 ---------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---Q 358
++A AQKI + +K + A + D +++ PT P P K+
Sbjct: 359 GAYALSAGYYDAYYLQAQKIR--RLIKNDFMNAFA----DVDVILGPTTPNPAWKIGAKT 412
Query: 359 MDPSA--LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
DP A LE F +++ A ++G +S+P G D LPV + LLA + +G LLN+
Sbjct: 413 HDPIAEYLEDF----YTI--TANLAGLPGLSMPAGFVDGLPVGVQLLAPYFQEGRLLNV 465
>sp|Q72L58|GATA_THET2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=gatA PE=3 SV=1
Length = 471
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 196/446 (43%), Gaps = 64/446 (14%)
Query: 5 DSDYGAFM---EKFVLQPSSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAAT 61
D GAF+ E+ + + + LPL+GL A+KD G T G+
Sbjct: 32 DPGLGAFLSLNERLLEEAEAVDPGLPLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYE 91
Query: 62 STAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAV 121
+TA A L L GA +GKT +DE + E+ + NP PDRVPGGSS GSA A+
Sbjct: 92 ATAVARLKAL--GALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAAL 149
Query: 122 GAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKI 181
A L +LG+DTGGSVR PA++CG++G +P++ VS G+I A S D +G A
Sbjct: 150 AADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMA----- 204
Query: 182 LNRVGRVLLQLADDVNLVRPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIENV 241
R R L L D V P D L P R + L + L G ++
Sbjct: 205 --RSVRDLALLMDAVAGPDPL------DATSLDLPP--RFQEALEGPLPPLRLG-VVREA 253
Query: 242 ILGD---YVKDKVPSLQHFLSEGNKEQEYSIPSLAALSSAMRLLQRYEFKNNHGDWVTTV 298
+ G+ + +L+ F G +E S PSL +A +L E +N + T+
Sbjct: 254 LAGNSPGVERALEEALKVFRELGLSVREVSWPSLPQALAAYYILAPAEASSNLARYDGTL 313
Query: 299 -----------------KPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTE 330
+ G + RV +EA A Q+ +
Sbjct: 314 YGRRAEGEEVEGMMEATRALFGLEVKRRVLVGTFVLSSGYYEAYYGRA------QAFRRR 367
Query: 331 LRAALSALLGDHGILVIPTVPGP--PPKLQMDPSALEVFRARAFSLLSIAGVSGFCQVSI 388
L+A AL + +L++PT P P P + DP L ++R +++ A ++G +S
Sbjct: 368 LKAEAQALFREVDLLLLPTTPHPAFPFGARRDP--LAMYREDLYTV--GANLTGLPALSF 423
Query: 389 PLGLHDNLPVAISLLAKHGSDGFLLN 414
P G +LPV + LLA G D LL
Sbjct: 424 PAGFEGHLPVGLQLLAPWGEDERLLR 449
>sp|Q87WR9|GATA_PSESM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=gatA PE=3 SV=1
Length = 483
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 188/419 (44%), Gaps = 50/419 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G A KD+F G T G+ + +T + LA S G ++GKT MDE
Sbjct: 67 PLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLA--SAGTVTLGKTNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E+ HYG NP + VPGGSS GSA AV A+L+ + GTDTGGS+R PA+
Sbjct: 125 AMGSANESSHYGAVKNPWNLECVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTN 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK--ILNRVGRVLLQLADDVNLVRPSQV 204
+ G +P++ VS G+I A S D G A + L G D ++ P
Sbjct: 185 LTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSIDEPVPD 244
Query: 205 IFAEDCLQLS----SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLS 259
A L +P + + GL + +L + E LG VK +P+LQH +
Sbjct: 245 YSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAIVKQVSLPNLQHAIP 304
Query: 260 EGNKEQEYSIPSLAALSSAM------RLLQRYEFKNNHGDWVTTVKPD-LGPGISERV-- 310
Y + + A SS + R R E + D + + GP + R+
Sbjct: 305 ------AYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358
Query: 311 ---------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---Q 358
++A AQKI + +K + +A + + +++ PT P P K+
Sbjct: 359 GAYALSAGYYDAYYLQAQKIR--RLIKNDFMSAFAEV----DVILGPTTPNPAWKIGAKT 412
Query: 359 MDPSA--LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
DP A LE F +++ A ++G +S+P G D LPV + LLA + +G LLN+
Sbjct: 413 HDPIAQYLEDF----YTI--TANLAGLPGLSMPAGFVDGLPVGVQLLAPYFQEGRLLNV 465
>sp|O66610|GATA_AQUAE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Aquifex aeolicus
(strain VF5) GN=gatA PE=1 SV=1
Length = 478
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 190/434 (43%), Gaps = 66/434 (15%)
Query: 20 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIG 79
S +LPL G+ A+KD V+G T + + A A + + GA +G
Sbjct: 56 SLKERELPLFGIPIAVKDNILVEGEKTTCASK--ILENFVAPYDATVIERLKKAGALIVG 113
Query: 80 KTIMDEMAYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVR 139
KT +DE A + E + NP +RVPGGSS GSA +V SLG+DTGGS+R
Sbjct: 114 KTNLDEFAMGSSTEYSAFFPTKNPWDLERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIR 173
Query: 140 VPASYCGIFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPKILNRVGRVLLQLADDVNLV 199
PAS+CG+ G +P++ VS G++ A S D +G F + +DV LV
Sbjct: 174 QPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFG--------------RRTEDVALV 219
Query: 200 RPSQVIFAEDCLQLSSIPSDRVTQGLVKSVEKLFGGHIIE--NVILGDYVKDKVPSLQHF 257
+ E + +P ++ + K V+ L G E L VK+ + ++F
Sbjct: 220 LEVISGWDEKDSTSAKVPVPEWSEEVKKEVKGLKIGLPKEFFEYELQPQVKE---AFENF 276
Query: 258 LSEGNKE-----------QEYSIPS--LAALSSAMRLLQRY----------EFKNNHGDW 294
+ E KE +YSIP+ + A S A L RY E+K+ +
Sbjct: 277 IKELEKEGFEIKEVSLPHVKYSIPTYYIIAPSEASSNLARYDGVRYGYRAKEYKDIFEMY 336
Query: 295 VTTVKPDLGPGISERV-----------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHG 343
T GP + R+ ++A AQK V + + + A +
Sbjct: 337 ARTRDEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQK--VRRLITNDFLKAFEEV----D 390
Query: 344 ILVIPTVPGPPPKL-QMDPSALEVFRARAFSLLSI-AGVSGFCQVSIPLGLHDNLPVAIS 401
++ PT P P K + + +E++ + +L++ A ++G +SIP+ D LPV
Sbjct: 391 VIASPTTPTLPFKFGERLENPIEMYLS---DILTVPANLAGLPAISIPIAWKDGLPVGGQ 447
Query: 402 LLAKHGSDGFLLNL 415
L+ KH + LL +
Sbjct: 448 LIGKHWDETTLLQI 461
>sp|Q48E92|GATA_PSE14 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=gatA PE=3 SV=1
Length = 483
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 188/419 (44%), Gaps = 50/419 (11%)
Query: 27 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEM 86
PL G A KD+F G T G+ + +T + LA S G ++GKT MDE
Sbjct: 67 PLLGAPLAHKDLFCTQGIRTSCGSRMLDNFKAPYDATVVSKLA--SAGTVTLGKTNMDEF 124
Query: 87 AYSINGENKHYGTPTNPCAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCG 146
A E+ HYG NP VPGGSS GSA AV A+L+ + GTDTGGS+R PA+
Sbjct: 125 AMGSANESSHYGAVKNPWNLQCVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPAALTN 184
Query: 147 IFGFRPSHSAVSTAGVIPMAQSFDTVGWFAWDPK--ILNRVGRVLLQLADDVNLVRPSQV 204
+ G +P++ VS G+I A S D G A + L G D ++ P
Sbjct: 185 LTGLKPTYGRVSRWGMIAYASSLDQAGPMARTAEDCALLLQGMAGFDPQDSTSIDEPVPD 244
Query: 205 IFAEDCLQLS----SIPSDRVTQGLVKSVEKLFGGHIIENVILGDYVKD-KVPSLQHFLS 259
A L +P + + GL + +L + E LG VK+ +P+LQH +
Sbjct: 245 YSASLNTSLKGLRIGVPKEYFSAGLDPRIAQLVHESVKELEKLGAVVKEVSLPNLQHAIP 304
Query: 260 EGNKEQEYSIPSLAALSSAM------RLLQRYEFKNNHGDWVTTVKPD-LGPGISERV-- 310
Y + + A SS + R R E + D + + GP + R+
Sbjct: 305 ------AYYVIAPAEASSNLSRFDGVRFGYRCEDPKDLTDLYKRSRAEGFGPEVQRRIMV 358
Query: 311 ---------WEAVRTSAQKIDVCQSVKTELRAALSALLGDHGILVIPTVPGPPPKL---Q 358
++A AQKI + +K + +A + + +++ PT P P K+
Sbjct: 359 GAYALSAGYYDAYYLQAQKIR--RLIKNDFMSAFAEV----DVILGPTTPNPAWKIGAKT 412
Query: 359 MDPSA--LEVFRARAFSLLSIAGVSGFCQVSIPLGLHDNLPVAISLLAKHGSDGFLLNL 415
DP A LE F +++ A ++G +S+P G D LPV + LLA + +G LLN+
Sbjct: 413 NDPIAEYLEDF----YTI--TANLAGLPGLSMPAGFVDGLPVGVQLLAPYFQEGRLLNV 465
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,952,597
Number of Sequences: 539616
Number of extensions: 7106917
Number of successful extensions: 19755
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 18404
Number of HSP's gapped (non-prelim): 954
length of query: 431
length of database: 191,569,459
effective HSP length: 120
effective length of query: 311
effective length of database: 126,815,539
effective search space: 39439632629
effective search space used: 39439632629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)