Your job contains 1 sequence.
>044301
MEEGKQEELNEKNSKHSKSKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYG
EIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQKVQQESQTHPELPGSEQVTK
VIRHFPQKQPVTDNAAPSKSRLSKDILAGVFGGP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044301
(154 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102594 - symbol:AT3G56510 species:3702 "Arabi... 252 1.5e-21 1
CGD|CAL0002361 - symbol:orf19.3161 species:5476 "Candida ... 179 1.7e-15 2
POMBASE|SPBC28E12.05 - symbol:esf2 "U3 snoRNP-associated ... 174 7.9e-13 1
UNIPROTKB|F1RQ93 - symbol:LOC100156526 "Uncharacterized p... 122 9.6e-10 2
UNIPROTKB|G4N0U5 - symbol:MGG_05815 "Pre-rRNA-processing ... 146 9.9e-10 1
UNIPROTKB|Q9ULW3 - symbol:ABT1 "Activator of basal transc... 115 1.1e-09 2
UNIPROTKB|J9P2J3 - symbol:ABT1 "Uncharacterized protein" ... 122 1.7e-09 2
SGD|S000005337 - symbol:ESF2 "Essential nucleolar protein... 138 6.7e-09 1
FB|FBgn0052708 - symbol:CG32708 species:7227 "Drosophila ... 132 1.4e-08 1
UNIPROTKB|Q148M8 - symbol:ABT1 "Activator of basal transc... 111 1.8e-08 2
MGI|MGI:1353636 - symbol:Abt1 "activator of basal transcr... 110 4.2e-08 2
ZFIN|ZDB-GENE-050522-127 - symbol:abt1 "activator of basa... 130 4.7e-08 1
RGD|1310785 - symbol:Abt1 "activator of basal transcripti... 121 3.4e-07 1
DICTYBASE|DDB_G0293576 - symbol:esf2 "U3 snoRNP-associate... 101 0.00042 1
>TAIR|locus:2102594 [details] [associations]
symbol:AT3G56510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0017025 "TBP-class protein binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 SMART:SM00360 EMBL:CP002686
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG332037
HOGENOM:HOG000242500 KO:K14785 EMBL:BT010761 EMBL:BT011791
EMBL:AK228191 IPI:IPI00528350 RefSeq:NP_001030873.1
RefSeq:NP_191210.2 UniGene:At.34931 ProteinModelPortal:Q6NM71
SMR:Q6NM71 STRING:Q6NM71 PaxDb:Q6NM71 PRIDE:Q6NM71 ProMEX:Q6NM71
EnsemblPlants:AT3G56510.1 EnsemblPlants:AT3G56510.2 GeneID:824818
KEGG:ath:AT3G56510 TAIR:At3g56510 InParanoid:Q6NM71 OMA:SIENETS
PhylomeDB:Q6NM71 ProtClustDB:CLSN2680425 Genevestigator:Q6NM71
Uniprot:Q6NM71
Length = 257
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/118 (44%), Positives = 76/118 (64%)
Query: 2 EEGKQEELNEXXXXXXXXXXXQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGE 61
E+ +E + ++LL+EA+KAD RG+CYLSRIPPHMD V+LR IL+QYGE
Sbjct: 16 EKESKETMKSQKADRKKKKLKEKLLKEASKADNRGVCYLSRIPPHMDHVRLRHILAQYGE 75
Query: 62 IQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQKVQQE-SQTHPELPGSEQV 118
+ RIYLAPED +V +RKR GGF+ Q FSEG+ + ++ ++ ++ EQ+
Sbjct: 76 LGRIYLAPEDSEAQV-----HRKRAGGFRGQRFSEGWVEFAKKSVAKRVADMLNGEQI 128
>CGD|CAL0002361 [details] [associations]
symbol:orf19.3161 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0034462 "small-subunit
processome assembly" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0001671 "ATPase activator activity" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG332037 KO:K14785 EMBL:AACQ01000100 EMBL:AACQ01000097
GO:GO:0006364 RefSeq:XP_714579.1 RefSeq:XP_714709.1
ProteinModelPortal:Q59YL9 STRING:Q59YL9 GeneID:3643622
GeneID:3643746 KEGG:cal:CaO19.10670 KEGG:cal:CaO19.3161
Uniprot:Q59YL9
Length = 320
Score = 179 (68.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 23 QRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKREN 82
+ L +E + + G+CYLSR+PP+M P KLR +LS++GEI R++L PEDPS V KR
Sbjct: 111 KELAKEQKRIKRTGVCYLSRVPPYMKPAKLRSVLSRFGEIDRLFLKPEDPS--VYHKRV- 167
Query: 83 RKRDGGFQDQGFSEGYKQKVQQ 104
+ GG + + F+EG+ + V +
Sbjct: 168 --KYGGNKKKNFTEGWIEFVNK 187
Score = 36 (17.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 6/34 (17%), Positives = 19/34 (55%)
Query: 101 KVQQESQTHPELPGSEQVTKVIRHFPQKQPVTDN 134
++ Q+ + + + + +K+I + +K+ TD+
Sbjct: 246 EISQQQKLNKSFVSNVEKSKMIANIQKKRKTTDD 279
>POMBASE|SPBC28E12.05 [details] [associations]
symbol:esf2 "U3 snoRNP-associated protein Esf2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 PomBase:SPBC28E12.05 GO:GO:0005730
GO:GO:0000166 EMBL:CU329671 Gene3D:3.30.70.330
GenomeReviews:CU329671_GR GO:GO:0003723 eggNOG:NOG332037
HOGENOM:HOG000242500 KO:K14785 HSSP:P40343 GO:GO:0006364
OrthoDB:EOG40VZZV PIR:T40042 RefSeq:NP_595758.1
ProteinModelPortal:O74362 STRING:O74362 EnsemblFungi:SPBC28E12.05.1
GeneID:2540503 KEGG:spo:SPBC28E12.05 OMA:ENAARES NextBio:20801630
Uniprot:O74362
Length = 334
Score = 174 (66.3 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 46/119 (38%), Positives = 69/119 (57%)
Query: 4 GKQEELNEXXXXXXXXXXXQRL--LEEAAKADQR-GICYLSRIPPHMDPVKLRQILSQYG 60
G + EL+E L +E+ KA +R G+ YLSRIPP+M P KLRQILSQYG
Sbjct: 87 GSENELDEETTKNANSIKKISLEEVEKQRKAIKRSGVIYLSRIPPYMAPNKLRQILSQYG 146
Query: 61 EIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQ-KVQQESQTHPELPGSEQV 118
+I R+YL PE + KR R R+GG + + EG+ + + ++ +++ EL + Q+
Sbjct: 147 KIGRVYLTPESSA-----KRAQRLRNGGNKRVMYEEGWIEFESKRVAKSVAELLNTNQI 200
>UNIPROTKB|F1RQ93 [details] [associations]
symbol:LOC100156526 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
GeneTree:ENSGT00390000002062 KO:K14785 OMA:HVPPRFR EMBL:CU469443
EMBL:CU469442 RefSeq:XP_001926341.2 RefSeq:XP_001928444.1
Ensembl:ENSSSCT00000001251 Ensembl:ENSSSCT00000001258
GeneID:100153723 GeneID:100156526 KEGG:ssc:100153723
KEGG:ssc:100156526 Uniprot:F1RQ93
Length = 272
Score = 122 (48.0 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
GI YL IPP P+ +R +LS YGE+ R++ PED R +K GG + +S
Sbjct: 43 GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQPEDGFVRRKKKAAAASTTGGKKRSKYS 102
Query: 96 EGYKQ 100
+ Y +
Sbjct: 103 KDYTE 107
Score = 40 (19.1 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 136 APSKSRLSKDILAGVFGGP 154
A ++R ++ +LA +FG P
Sbjct: 239 AEEQARSNRGLLARIFGAP 257
>UNIPROTKB|G4N0U5 [details] [associations]
symbol:MGG_05815 "Pre-rRNA-processing protein ESF2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 EMBL:CM001233 Gene3D:3.30.70.330
GO:GO:0003676 KO:K14785 RefSeq:XP_003712130.1
ProteinModelPortal:G4N0U5 EnsemblFungi:MGG_05815T0 GeneID:2684160
KEGG:mgr:MGG_05815 Uniprot:G4N0U5
Length = 330
Score = 146 (56.5 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
G+ YLSRIPP M P KLR +L YG+I RI+L+PEDP R KR R + GG + + F
Sbjct: 128 GVVYLSRIPPFMKPSKLRSLLVPYGKINRIFLSPEDPEAR---KR--RLKAGGNKKRCFV 182
Query: 96 EGY 98
+G+
Sbjct: 183 DGW 185
>UNIPROTKB|Q9ULW3 [details] [associations]
symbol:ABT1 "Activator of basal transcription 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] InterPro:IPR012677 PROSITE:PS50102 GO:GO:0005634
GO:GO:0005730 GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330
GO:GO:0006357 GO:GO:0003723 GO:GO:0005667 GO:GO:0003713 CTD:29777
eggNOG:NOG332037 HOGENOM:HOG000242500 HOVERGEN:HBG057308 KO:K14785
OMA:HVPPRFR OrthoDB:EOG4S1T7W GO:GO:0021522 GO:GO:0006366
EMBL:AB027258 EMBL:AL513548 EMBL:BC048812 EMBL:BC066313
IPI:IPI00002938 RefSeq:NP_037507.1 UniGene:Hs.254406
ProteinModelPortal:Q9ULW3 SMR:Q9ULW3 IntAct:Q9ULW3 STRING:Q9ULW3
PhosphoSite:Q9ULW3 DMDM:74753396 PRIDE:Q9ULW3 DNASU:29777
Ensembl:ENST00000274849 GeneID:29777 KEGG:hsa:29777 UCSC:uc003nii.3
GeneCards:GC06P026597 HGNC:HGNC:17369 neXtProt:NX_Q9ULW3
PharmGKB:PA38451 InParanoid:Q9ULW3 PhylomeDB:Q9ULW3
GenomeRNAi:29777 NextBio:52298 Bgee:Q9ULW3 CleanEx:HS_ABT1
Genevestigator:Q9ULW3 GermOnline:ENSG00000146109 Uniprot:Q9ULW3
Length = 272
Score = 115 (45.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 5 KQEELNEXXXXXXXXXXXQRLLEEAAKADQR----GICYLSRIPPHMDPVKLRQILSQYG 60
+QE L E Q EEAA ++ GI YL IPP P+ +R +LS YG
Sbjct: 12 EQEPL-EGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYG 70
Query: 61 EIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQ 100
E+ R++ ED R +R+++ G + + +++ Y +
Sbjct: 71 EVGRVFFQAED---RFVRRKKKAAAAAGGKKRSYTKDYTE 107
Score = 47 (21.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 136 APSKSRLSKDILAGVFGGP 154
A K+R +K +LA +FG P
Sbjct: 239 AQDKARSNKGLLARIFGAP 257
>UNIPROTKB|J9P2J3 [details] [associations]
symbol:ABT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
GeneTree:ENSGT00390000002062 OMA:HVPPRFR EMBL:AAEX03017609
Ensembl:ENSCAFT00000049560 Uniprot:J9P2J3
Length = 308
Score = 122 (48.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 6 QEELNEXXXXXXXXXXXQRLLEEAA-KADQR---GICYLSRIPPHMDPVKLRQILSQYGE 61
QE L E Q EEAA A +R GI YL +PP P+ +R +LS +GE
Sbjct: 46 QEPL-EGTDQKAEAEEEQEESEEAACGAKKRVVPGIVYLGHLPPRFRPLHVRNLLSAFGE 104
Query: 62 IQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQ 100
+ R++ PED R +K + GG + +S+ Y +
Sbjct: 105 VGRVFFQPEDGFVRRKKKAVSASATGGKKRSKYSKDYTE 143
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 136 APSKSRLSKDILAGVFGGP 154
A ++R ++ +LA +FG P
Sbjct: 275 AKDQARSNRGLLAKIFGAP 293
>SGD|S000005337 [details] [associations]
symbol:ESF2 "Essential nucleolar protein involved in pre-18S
rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA;IDA]
[GO:0001671 "ATPase activator activity" evidence=IDA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0034462
"small-subunit processome assembly" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR012677 PROSITE:PS50102 SGD:S000005337
GO:GO:0005737 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
EMBL:BK006947 GO:GO:0003723 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500 KO:K14785
GO:GO:0001671 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 OMA:PGFKWAD
OrthoDB:EOG40VZZV EMBL:Z71669 PIR:S63385 RefSeq:NP_014452.1
ProteinModelPortal:P53743 SMR:P53743 DIP:DIP-6417N IntAct:P53743
MINT:MINT-618016 STRING:P53743 PaxDb:P53743 PeptideAtlas:P53743
EnsemblFungi:YNR054C GeneID:855790 KEGG:sce:YNR054C CYGD:YNR054c
NextBio:980277 Genevestigator:P53743 GermOnline:YNR054C
GO:GO:0034462 Uniprot:P53743
Length = 316
Score = 138 (53.6 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 23 QRLLEEAAKADQR--GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKR 80
Q + +AAK + G+ Y S IPP+M P K+RQIL+++GE+ R++L ED +K
Sbjct: 99 QLVKSKAAKKSKHKTGVVYFSSIPPYMKPAKMRQILTRFGEVDRLFLKKEDD-----QKY 153
Query: 81 ENRKRDGGFQDQGFSEGYKQKVQQ 104
+ R + GG + + EG+ + +++
Sbjct: 154 KQRVKGGGNKKNKYEEGWAEFIRK 177
>FB|FBgn0052708 [details] [associations]
symbol:CG32708 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0022008 GO:GO:0000166 EMBL:AE014298
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00390000002062
KO:K14785 OrthoDB:EOG4NS1TQ EMBL:BT029073 RefSeq:NP_727306.1
UniGene:Dm.23782 SMR:Q9W394 IntAct:Q9W394 MINT:MINT-926850
STRING:Q9W394 EnsemblMetazoa:FBtr0071286 GeneID:318161
KEGG:dme:Dmel_CG32708 UCSC:CG32708-RA FlyBase:FBgn0052708
InParanoid:Q9W394 OMA:NTIPRDM GenomeRNAi:318161 NextBio:845024
Uniprot:Q9W394
Length = 239
Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 30 AKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
AK + GI Y+S IP HM+ +LR+IL +YG I R+YL PE S+ +K + RKR
Sbjct: 68 AKKRKMGIIYISNIPKHMNVTRLREILGEYGAIGRVYLQPEKLSSAKAKKNK-RKRYNIH 126
Query: 90 QDQGFSEGYKQK 101
+G+ E +K K
Sbjct: 127 FTEGWVE-FKSK 137
>UNIPROTKB|Q148M8 [details] [associations]
symbol:ABT1 "Activator of basal transcription 1"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR012677
PROSITE:PS50102 GO:GO:0005730 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0003723 GO:GO:0005667
EMBL:BC118119 IPI:IPI00702129 RefSeq:NP_001069620.1
UniGene:Bt.24078 STRING:Q148M8 PRIDE:Q148M8
Ensembl:ENSBTAT00000014277 GeneID:539270 KEGG:bta:539270 CTD:29777
eggNOG:NOG332037 GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 InParanoid:Q148M8 KO:K14785 OMA:HVPPRFR
OrthoDB:EOG4S1T7W NextBio:20877889 GO:GO:0021522 GO:GO:0006366
Uniprot:Q148M8
Length = 275
Score = 111 (44.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 27 EEAAKADQR----GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKREN 82
E+AA ++ GI YL IPP P+ +R +LS YGE+ R++ ED + +K
Sbjct: 33 EDAAGGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAEDGFVKRKKKAAA 92
Query: 83 RKRDGGFQDQGFSEGYKQ 100
GG + +S+ Y +
Sbjct: 93 ASAAGGKKRSKYSKDYTE 110
Score = 40 (19.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 136 APSKSRLSKDILAGVFGGP 154
A ++R ++ +LA +FG P
Sbjct: 242 AQDQARSNRGLLAKIFGAP 260
>MGI|MGI:1353636 [details] [associations]
symbol:Abt1 "activator of basal transcription 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=IGI] InterPro:IPR012677
PROSITE:PS50102 MGI:MGI:1353636 GO:GO:0005730 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0003723
GO:GO:0005667 CTD:29777 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 KO:K14785 OMA:HVPPRFR OrthoDB:EOG4S1T7W
GO:GO:0021522 GO:GO:0006366 EMBL:AB021860 EMBL:AK009557
EMBL:AK029222 EMBL:AL714025 EMBL:BC082609 IPI:IPI00471226
RefSeq:NP_038952.1 UniGene:Mm.292094 ProteinModelPortal:Q9QYL7
SMR:Q9QYL7 STRING:Q9QYL7 PhosphoSite:Q9QYL7 PRIDE:Q9QYL7
Ensembl:ENSMUST00000041782 GeneID:30946 KEGG:mmu:30946
UCSC:uc007pto.1 InParanoid:Q0VGU7 NextBio:307402 Bgee:Q9QYL7
CleanEx:MM_ABT1 Genevestigator:Q9QYL7 GermOnline:ENSMUSG00000036376
Uniprot:Q9QYL7
Length = 269
Score = 110 (43.8 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
GI YL +PP P+ +R +LS YGE+ R++ ED + RK++ GG + +S
Sbjct: 48 GIVYLGHVPPRFRPLHVRNLLSAYGEVGRVFFQAEDHFVK--RKKKAAAAAGGKKGAKYS 105
Query: 96 EGYKQ 100
+ Y +
Sbjct: 106 KDYTE 110
Score = 37 (18.1 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 139 KSRLSKDILAGVFGGP 154
++R ++ +LA +FG P
Sbjct: 245 QARSNRGLLAKIFGAP 260
>ZFIN|ZDB-GENE-050522-127 [details] [associations]
symbol:abt1 "activator of basal transcription 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 SMART:SM00360 ZFIN:ZDB-GENE-050522-127
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:29777
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 KO:K14785 OMA:PGFKWAD EMBL:CR457452
EMBL:BC095115 IPI:IPI00607266 RefSeq:NP_001018383.1
UniGene:Dr.84063 STRING:Q503Z6 Ensembl:ENSDART00000064113
GeneID:553568 KEGG:dre:553568 InParanoid:Q503Z6 NextBio:20880307
Uniprot:Q503Z6
Length = 305
Score = 130 (50.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
GI YL IPP M P +R +LS YGEI RI+L PED R ++++ K+ G + F+
Sbjct: 86 GIVYLGHIPPRMRPKHMRNLLSAYGEIGRIFLQPED---RCVKRK---KKKAGCKSSSFT 139
Query: 96 EGY 98
EG+
Sbjct: 140 EGW 142
>RGD|1310785 [details] [associations]
symbol:Abt1 "activator of basal transcription 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=ISO] InterPro:IPR012677
PROSITE:PS50102 RGD:1310785 GO:GO:0005730 GO:GO:0006355
GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 CTD:29777 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 KO:K14785 OMA:HVPPRFR OrthoDB:EOG4S1T7W
EMBL:BC099109 IPI:IPI00366354 RefSeq:NP_001020845.1
UniGene:Rn.16564 STRING:Q4KLM5 PRIDE:Q4KLM5
Ensembl:ENSRNOT00000023649 GeneID:306960 KEGG:rno:306960
UCSC:RGD:1310785 InParanoid:Q4KLM5 NextBio:656746
Genevestigator:Q4KLM5 GermOnline:ENSRNOG00000017585 Uniprot:Q4KLM5
Length = 268
Score = 121 (47.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
GI YL +PP P+ +R +LS YGE+ R++ EDP R RK++ GG + +S
Sbjct: 47 GIVYLGHVPPRFRPLHVRNLLSVYGEVGRVFFQAEDPFVR--RKKKAAAAAGGKKGAKYS 104
Query: 96 EGYKQ 100
+ Y +
Sbjct: 105 KDYTE 109
>DICTYBASE|DDB_G0293576 [details] [associations]
symbol:esf2 "U3 snoRNP-associated protein Esf2"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0293576
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG332037 KO:K14785
EMBL:AAFI02000218 GO:GO:0006364 RefSeq:XP_629017.1
ProteinModelPortal:Q54BL2 STRING:Q54BL2 EnsemblProtists:DDB0266368
GeneID:8629301 KEGG:ddi:DDB_G0293576 OMA:PGFKWAD
ProtClustDB:CLSZ2846560 Uniprot:Q54BL2
Length = 296
Score = 101 (40.6 bits), Expect = 0.00042, P = 0.00042
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 33 DQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRD 86
+ +GI YLS IP M P KL+Q+L++YG++ R++L R +R+N + D
Sbjct: 107 ENKGIIYLSTIPSRMKPAKLKQLLAKYGKVTRMHLV------RANVERKNHRND 154
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.133 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 154 143 0.00091 102 3 11 23 0.38 32
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 543 (58 KB)
Total size of DFA: 121 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.77u 0.09s 15.86t Elapsed: 00:00:00
Total cpu time: 15.77u 0.10s 15.87t Elapsed: 00:00:00
Start: Tue May 21 03:24:50 2013 End: Tue May 21 03:24:50 2013