BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044301
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74362|ESF2_SCHPO Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=esf2 PE=1 SV=1
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 8/98 (8%)
Query: 4 GKQEELNEKNSKHSKSKKKQRL--LEEAAKADQR-GICYLSRIPPHMDPVKLRQILSQYG 60
G + EL+E+ +K++ S KK L +E+ KA +R G+ YLSRIPP+M P KLRQILSQYG
Sbjct: 87 GSENELDEETTKNANSIKKISLEEVEKQRKAIKRSGVIYLSRIPPYMAPNKLRQILSQYG 146
Query: 61 EIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGY 98
+I R+YL PE + KR R R+GG + + EG+
Sbjct: 147 KIGRVYLTPESSA-----KRAQRLRNGGNKRVMYEEGW 179
>sp|Q59YL9|ESF2_CANAL Pre-rRNA-processing protein ESF2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=ESF2 PE=3 SV=2
Length = 320
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Query: 25 LLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRK 84
L +E + + G+CYLSR+PP+M P KLR +LS++GEI R++L PEDPS V KR
Sbjct: 113 LAKEQKRIKRTGVCYLSRVPPYMKPAKLRSVLSRFGEIDRLFLKPEDPS--VYHKRV--- 167
Query: 85 RDGGFQDQGFSEGYKQKVQQ 104
+ GG + + F+EG+ + V +
Sbjct: 168 KYGGNKKKNFTEGWIEFVNK 187
>sp|Q2GZQ4|ESF2_CHAGB Pre-rRNA-processing protein ESF2 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=ESF2 PE=3 SV=2
Length = 332
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 17 SKSKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRV 76
SK K+ L+ A + G+ YLSRIPP M P KLR +L YG+I RI+L PEDP+
Sbjct: 102 SKPLAKKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGKINRIFLTPEDPTEHT 161
Query: 77 LRKRENRKRDGGFQDQGFSEGYKQKVQQ 104
R R+GG + + F+EG+ + V++
Sbjct: 162 -----RRVRNGGNKKRSFTEGWVEFVKK 184
>sp|Q4HZ47|ESF2_GIBZE Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ESF2 PE=3
SV=1
Length = 321
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 17 SKSKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRV 76
+++ K+ L+ A + G+ YLSRIPP M P KLR +L YG I RI+LAPEDP++
Sbjct: 99 TRTLTKKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGTINRIFLAPEDPASHA 158
Query: 77 LRKRENRKRDGGFQDQGFSEGY 98
R R GG + + ++EG+
Sbjct: 159 RRVRA-----GGNKKRSYTEGW 175
>sp|Q7S8W7|ESF2_NEUCR Pre-rRNA-processing protein esf-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=esf-2 PE=3 SV=1
Length = 340
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 19 SKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLR 78
+KK + EEA K + G+ Y+SR+PP M P KLR +L YG++ RI+LAPEDP
Sbjct: 109 TKKNLIVTEEAIK--KSGVVYISRVPPFMTPAKLRSLLEPYGKLNRIFLAPEDPVA---- 162
Query: 79 KRENRKRDGGFQDQGFSEGYKQKVQQ 104
R R R GG + + F+EG+ + V++
Sbjct: 163 -RRKRIRSGGNKKKMFTEGWIEFVKK 187
>sp|Q6BSS5|ESF2_DEBHA Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ESF2 PE=3 SV=2
Length = 303
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 23 QRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKREN 82
++L +E K + G+CYLS+IPP+M P KLR +LS++G+I R++L PED ST
Sbjct: 83 EQLAKEQKKIKKTGVCYLSKIPPYMKPAKLRSVLSRFGKIDRLFLKPEDNSTYT-----K 137
Query: 83 RKRDGGFQDQGFSEGY 98
R + GG + + ++ G+
Sbjct: 138 RVKYGGNKKKNYTAGW 153
>sp|A3LVD5|ESF2_PICST Pre-rRNA-processing protein ESF2 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=ESF2 PE=3 SV=2
Length = 347
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 1 MEEGKQEELNEKNSKHSKSKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYG 60
+E G + +E+ + K ++L +E + + G+CYLSRIPP+M P LR ILS++G
Sbjct: 111 IEVGDVDSTSERKNGKIKKLTSRQLQKEQKRIKRTGVCYLSRIPPYMKPATLRSILSRFG 170
Query: 61 EIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQKVQQ 104
+I R++L PED + R + GG + + F+EG+ + V +
Sbjct: 171 KIDRLFLKPEDSAI-----YHKRVKYGGNKKKNFTEGWVEFVNK 209
>sp|Q6CFT1|ESF2_YARLI Pre-rRNA-processing protein ESF2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=ESF2 PE=3 SV=1
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 17 SKSKKKQRLLEEAAKADQR----GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDP 72
+K+K K EE K +++ G+ Y SRIPP MDP KLR +L ++G + RIYL PEDP
Sbjct: 103 TKAKTKPMTKEEIEKHNKKIAKTGVVYFSRIPPLMDPGKLRMLLQRFGIVDRIYLVPEDP 162
Query: 73 STRVLRKRENRKRDGGFQDQGFSEGYKQ 100
+ +R R GG + ++EG+ +
Sbjct: 163 KAQAVRIRH-----GGNRALAYTEGWAE 185
>sp|Q6FWS2|ESF2_CANGA Pre-rRNA-processing protein ESF2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ESF2 PE=3 SV=1
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
G+ YLSRIPP+M P K+RQILS++GEI R++L ED + K + R R GG + +
Sbjct: 114 GVVYLSRIPPYMKPAKMRQILSRFGEIDRLFLKREDEA-----KHKQRTRGGGNKKIMYE 168
Query: 96 EGY 98
EG+
Sbjct: 169 EGW 171
>sp|Q6CSP8|ESF2_KLULA Pre-rRNA-processing protein ESF2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=ESF2 PE=3 SV=1
Length = 293
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
G+ YLSR+PP+M P KLRQIL+++GE+ R++L E+ K + R + GG + F
Sbjct: 91 GVVYLSRVPPYMKPAKLRQILTRFGEVDRLFLKREEE-----HKHQQRVKSGGNKKTMFE 145
Query: 96 EGY 98
EG+
Sbjct: 146 EGW 148
>sp|Q0UM32|ESF2_PHANO Pre-rRNA-processing protein ESF2 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=ESF2 PE=3 SV=1
Length = 326
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 29 AAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGG 88
A K D+ G+ YLSR+PP M P LR +L+ YG + +I+L PE ++R R R GG
Sbjct: 111 APKKDKSGVIYLSRVPPFMKPTVLRSLLTPYGAVGKIFLTPEPAASRT-----QRLRGGG 165
Query: 89 FQDQGFSEGY 98
+ + F +G+
Sbjct: 166 TRRKLFLDGW 175
>sp|P53743|ESF2_YEAST Pre-rRNA-processing protein ESF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ESF2 PE=1 SV=1
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
G+ Y S IPP+M P K+RQIL+++GE+ R++L ED +K + R + GG + +
Sbjct: 114 GVVYFSSIPPYMKPAKMRQILTRFGEVDRLFLKKEDD-----QKYKQRVKGGGNKKNKYE 168
Query: 96 EGYKQKVQQ 104
EG+ + +++
Sbjct: 169 EGWAEFIRK 177
>sp|Q75DA3|ESF2_ASHGO Pre-rRNA-processing protein ESF2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ESF2
PE=3 SV=1
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFS 95
G+ YLS+IPP+M P K+RQILS++G++ R++L ED + R + GG + F
Sbjct: 116 GVVYLSKIPPYMKPAKMRQILSRFGDLDRLFLKREDEHS-----HRQRVKGGGNKKVMFR 170
Query: 96 EGYKQKVQQ 104
EG+ + +++
Sbjct: 171 EGWAEFIRK 179
>sp|Q4KLM5|ABT1_RAT Activator of basal transcription 1 OS=Rattus norvegicus GN=Abt1
PE=1 SV=1
Length = 268
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTR 75
GI YL +PP P+ +R +LS YGE+ R++ EDP R
Sbjct: 47 GIVYLGHVPPRFRPLHVRNLLSVYGEVGRVFFQAEDPFVR 86
>sp|A1DIN9|ESF2_NEOFI Pre-rRNA-processing protein esf2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=esf2
PE=3 SV=1
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 31 KADQRGICYLSRIPPHMDPVKLRQILSQ--YGEIQRIYLAPEDPSTRVLRKRENRKR 85
K ++ G+ YLS +PP++ P L+ +L +G I +++L PE PS R+R N+++
Sbjct: 144 KKNKTGVIYLSSLPPYLKPFALKSMLETRGFGPITKVFLTPEVPSNSAPRRRSNKRK 200
>sp|Q4WZJ0|ESF2_ASPFU Pre-rRNA-processing protein esf2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=esf2
PE=3 SV=2
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 31 KADQRGICYLSRIPPHMDPVKLRQILSQ--YGEIQRIYLAPEDPSTRVLRKRENRKR 85
K ++ G+ YLS +PP++ P L+ +L +G I +++L PE PS R+R N+++
Sbjct: 144 KKNKTGVIYLSSLPPYLKPFALKSMLETRGFGPITKVFLTPEVPSNSAPRRRSNKRK 200
>sp|Q54BL2|EFS2_DICDI Putative pre-rRNA-processing protein esf2 OS=Dictyostelium
discoideum GN=esf2 PE=3 SV=1
Length = 296
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 12/66 (18%)
Query: 33 DQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQ 92
+ +GI YLS IP M P KL+Q+L++YG++ R++L R +R+N + D
Sbjct: 107 ENKGIIYLSTIPSRMKPAKLKQLLAKYGKVTRMHLV------RANVERKNHRND------ 154
Query: 93 GFSEGY 98
F EG+
Sbjct: 155 MFKEGW 160
>sp|Q148M8|ABT1_BOVIN Activator of basal transcription 1 OS=Bos taurus GN=ABT1 PE=2
SV=1
Length = 275
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPED 71
GI YL IPP P+ +R +LS YGE+ R++ ED
Sbjct: 46 GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAED 81
>sp|Q5R9Y3|ABT1_PONAB Activator of basal transcription 1 OS=Pongo abelii GN=ABT1 PE=2
SV=1
Length = 272
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPED 71
GI YL IPP P+ +R +LS YGE+ R++ ED
Sbjct: 46 GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAED 81
>sp|Q9ULW3|ABT1_HUMAN Activator of basal transcription 1 OS=Homo sapiens GN=ABT1 PE=1
SV=1
Length = 272
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPED 71
GI YL IPP P+ +R +LS YGE+ R++ ED
Sbjct: 46 GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAED 81
>sp|Q9QYL7|ABT1_MOUSE Activator of basal transcription 1 OS=Mus musculus GN=Abt1 PE=2
SV=1
Length = 269
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPED 71
GI YL +PP P+ +R +LS YGE+ R++ ED
Sbjct: 48 GIVYLGHVPPRFRPLHVRNLLSAYGEVGRVFFQAED 83
>sp|A1C807|ESF2_ASPCL Pre-rRNA-processing protein esf2 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=esf2 PE=3 SV=1
Length = 368
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 31 KADQRGICYLSRIPPHMDPVKLRQILSQYG--EIQRIYLAPEDPSTRVLRKRENRKR 85
K ++ G+ YLS +PP++ P L+ +L G I +++L PE PS R+R N+++
Sbjct: 143 KKNKTGVVYLSSLPPYLKPFALKSMLETRGFEPITKVFLTPEVPSAAGPRRRSNKRK 199
>sp|A2QJZ4|ESF2_ASPNC Pre-rRNA-processing protein esf2 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=esf2 PE=3 SV=1
Length = 304
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 10 NEKNSKHSKSKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILS--QYGEIQRIYL 67
E +K S SKK ++A K ++ G+ Y S +PP++ P L+ +L +G I R++L
Sbjct: 79 TEVEAKKSTSKKPLDKAKKAPKKNKTGVIYFSSLPPYLKPFALKNLLETRSFGPITRVFL 138
Query: 68 APEDPSTRVLRKRENRKRDGGFQDQGFSEGY 98
+PE R+R N+++ +S+G+
Sbjct: 139 SPEVRPASAPRRRSNKRKT-------YSDGW 162
>sp|P0CL96|ESF2_CRYNJ Pre-rRNA-processing protein ESF2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ESF2 PE=3 SV=1
Length = 266
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIY 66
GI ++SR+PP M P K+R ++ ++G+I ++Y
Sbjct: 66 GIVFISRVPPGMTPQKIRHLMGRWGDIGKVY 96
>sp|P0CL97|ESF2_CRYNB Pre-rRNA-processing protein ESF2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ESF2 PE=3
SV=1
Length = 266
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYGEIQRIY 66
GI ++SR+PP M P K+R ++ ++G+I ++Y
Sbjct: 66 GIVFISRVPPGMTPQKIRHLMGRWGDIGKVY 96
>sp|Q2UB17|ESF2_ASPOR Pre-rRNA-processing protein esf2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=esf2 PE=3 SV=1
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 31 KADQRGICYLSRIPPHMDPVKLRQILS--QYGEIQRIYLAPEDPSTRVLRKRENRKR 85
K ++ G+ YLS +PP++ P L+ +L +G I +++L+P R+R N+++
Sbjct: 122 KKNKTGVVYLSSLPPYLKPFALKSMLEARSFGPITKVFLSPSVRPASAPRRRSNKRK 178
>sp|Q1DJR2|ESF2_COCIM Pre-rRNA-processing protein ESF2 OS=Coccidioides immitis (strain
RS) GN=ESF2 PE=3 SV=1
Length = 356
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQ--YGEIQRIYLAPEDPSTRVLRKRENRKR 85
G+ Y S +PP++ P L+ +L +G I +I+L P S+ KR N++R
Sbjct: 146 GVIYFSSLPPYLKPFALKSLLIARGFGPITKIFLTPSVQSSSA-GKRSNKRR 196
>sp|B4MM23|SHEP_DROWI Protein alan shepard OS=Drosophila willistoni GN=shep PE=3 SV=2
Length = 581
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +LS+YG++ STR+LR ++ + GF
Sbjct: 319 YIANLPPHFKETDLEAMLSKYGQVV---------STRILRDQQMNSKGVGF 360
>sp|B4HUE4|SHEP_DROSE Protein alan shepard OS=Drosophila sechellia GN=shep PE=3 SV=1
Length = 579
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +LS+YG++ STR+LR ++ + GF
Sbjct: 313 YIANLPPHFKETDLEAMLSKYGQVV---------STRILRDQQMNSKGVGF 354
>sp|B3NGA1|SHEP_DROER Protein alan shepard OS=Drosophila erecta GN=shep PE=3 SV=1
Length = 582
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +LS+YG++ STR+LR ++ + GF
Sbjct: 313 YIANLPPHFKETDLEAMLSKYGQVV---------STRILRDQQMNSKGVGF 354
>sp|Q8MSV2|SHEP_DROME Protein alan shepard OS=Drosophila melanogaster GN=shep PE=1 SV=1
Length = 578
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +LS+YG++ STR+LR ++ + GF
Sbjct: 313 YIANLPPHFKETDLEAMLSKYGQVV---------STRILRDQQMNSKGVGF 354
>sp|B4QRJ0|SHEP_DROSI Protein alan shepard OS=Drosophila simulans GN=shep PE=3 SV=1
Length = 576
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +LS+YG++ STR+LR ++ + GF
Sbjct: 311 YIANLPPHFKETDLEAMLSKYGQVV---------STRILRDQQMNSKGVGF 352
>sp|B4PIS2|SHEP_DROYA Protein alan shepard OS=Drosophila yakuba GN=shep PE=3 SV=1
Length = 582
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +LS+YG++ STR+LR ++ + GF
Sbjct: 313 YIANLPPHFKETDLEAMLSKYGQVV---------STRILRDQQMNSKGVGF 354
>sp|Q5AWM5|ESF2_EMENI Pre-rRNA-processing protein esf2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=esf2 PE=3 SV=1
Length = 346
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 36 GICYLSRIPPHMDPVKLRQILSQYG--EIQRIYLAPEDPSTRVLRKRENRKR 85
G+ Y S +PP++ P L+ +L G I +++L P R+R N+++
Sbjct: 136 GVVYFSSLPPYLKPFALKSLLETRGFKPITKVFLTPAVRPPSAPRRRSNKRK 187
>sp|B3M3R5|SHEP_DROAN Protein alan shepard OS=Drosophila ananassae GN=shep PE=3 SV=2
Length = 597
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +LS+YG++ STR+LR ++ + GF
Sbjct: 327 YIANLPPHYKETDLEAMLSKYGQVV---------STRILRDQQMNSKGVGF 368
>sp|B4IX08|SHEP_DROGR Protein alan shepard OS=Drosophila grimshawi GN=shep PE=3 SV=1
Length = 609
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +L++YG++ STR+LR ++ + GF
Sbjct: 339 YIANLPPHFKETDLEAMLAKYGQVV---------STRILRDQQMNSKGVGF 380
>sp|B4LFQ9|SHEP_DROVI Protein alan shepard OS=Drosophila virilis GN=shep PE=3 SV=2
Length = 595
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGF 89
Y++ +PPH L +L++YG++ STR+LR ++ + GF
Sbjct: 325 YIANLPPHFKETDLEAMLAKYGQVV---------STRILRDQQMNSKGVGF 366
>sp|P53927|NOP15_YEAST Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOP15 PE=1 SV=1
Length = 220
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 9 LNEKNSKHSKSKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYLA 68
LN K + K K ++ LEE + GI Y+SR+P +L + +Q+G+++ + LA
Sbjct: 69 LNPKKQANEKKSKDKKTLEEYS-----GIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLA 123
>sp|Q6DIQ1|GL1D1_XENTR Glycosyltransferase 1 domain-containing protein 1 OS=Xenopus
tropicalis GN=glt1d1 PE=2 SV=1
Length = 345
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 38 CYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEG 97
YL+ I P +DPV +++ ++ EI +YL E P + + + KR + SEG
Sbjct: 196 VYLAIIGPMVDPVFTKEVENKLEEIDGVYLIKEIPQSDL---QAVIKRSFALVNSSLSEG 252
Query: 98 YKQKVQQESQTHP-----ELPGSEQVTK 120
+ + ++PG+ + K
Sbjct: 253 MSAAILEAMDLEVPVLARDIPGNSAIIK 280
>sp|Q05AT9|U1SBP_XENLA U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Xenopus
laevis GN=snrnp35 PE=2 SV=1
Length = 272
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 38 CYLSRIPPHMDPVKLRQILSQYGEIQRIYLA 68
++SR+ P KL+++ S+YG+I+RI L
Sbjct: 53 LFVSRLSPQTTEEKLKEVFSRYGDIKRIRLV 83
>sp|Q8T6J1|ABCA6_DICDI ABC transporter A family member 6 OS=Dictyostelium discoideum
GN=abcA6 PE=3 SV=1
Length = 1631
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 2 EEGKQEELNEKNSKHSKSKKKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQI---LSQ 58
E G E++N S +K++ L A + I +L + MDPV RQ+ L +
Sbjct: 612 EVGLAEKMNAPAGSLSGGQKRKLCLGIAFIGRSK-IIFLDEVTSGMDPVSRRQVWDFLLK 670
Query: 59 YGEIQRI-----YLAPED-PSTRVLRKRENRKRDGG---FQDQGFSEGYKQKVQQESQTH 109
Y + + I YL D R+ + + R G F F +GY ++ +
Sbjct: 671 YKKGKTIILTTHYLEEADYLGDRIAIISQGKLRCDGTSLFLKNRFGQGYLLTCNKKLENA 730
Query: 110 PELPGSEQVTKVIRHF-PQKQPVTDNAAPSKSRLSKDILA 148
+ QV++ I++F P +TD+ A RL + L+
Sbjct: 731 SNGFNTNQVSEFIKNFIPGASILTDSGAELSYRLPTESLS 770
>sp|Q4KMD3|U1SBP_DANRE U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Danio
rerio GN=snrnp35 PE=2 SV=1
Length = 208
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 7/42 (16%)
Query: 34 QRGIC-------YLSRIPPHMDPVKLRQILSQYGEIQRIYLA 68
RG+C +++R+ P KLR + S++G+I+R+ L
Sbjct: 41 NRGVCGDPDLTLFVARLNPQTTEEKLRDVFSKFGDIRRLRLV 82
>sp|Q0JGS5|EAR1_ORYSJ Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica
GN=PLA2 PE=2 SV=1
Length = 683
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 45 PHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQKVQQ 104
P M +LR+I YG+++ + + PS + + + R D + E + +++
Sbjct: 231 PAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKELFGRRLVV 290
Query: 105 ESQTHPELPGSEQVTKVIRHFPQKQPVTDNAAPSKSRL 142
E T P LPG + R QP+ AP+ RL
Sbjct: 291 E-YTRPSLPGPRR-----RGHVSHQPL----APTPPRL 318
>sp|A2WY46|EAR1_ORYSI Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2
PE=2 SV=1
Length = 680
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 45 PHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQKVQQ 104
P M +LR+I YG+++ + + PS + + + R D + E + +++
Sbjct: 231 PAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRALHELNGKELFGRRLVV 290
Query: 105 ESQTHPELPG 114
E T P LPG
Sbjct: 291 E-YTRPSLPG 299
>sp|Q6DGU5|S2546_DANRE Solute carrier family 25 member 46 OS=Danio rerio GN=slc25a46 PE=2
SV=1
Length = 405
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 78 RKRENRKRDGGFQDQGFSEGYKQKVQQESQTHPELPGSEQVTKVIRHFPQKQP 130
R RE+ GG+ + F+ +Q T P++PGS + HF + P
Sbjct: 15 RGREDPAFSGGYSGRSFNNSSSSDLQNWVTTPPDIPGSRNL-----HFDDRTP 62
>sp|P0C198|CHK1_USTMA Serine/threonine-protein kinase CHK1 OS=Ustilago maydis (strain 521
/ FGSC 9021) GN=CHK1 PE=3 SV=1
Length = 662
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 10/76 (13%)
Query: 67 LAPEDPSTRVLRKRENRKRDGGFQDQGFSEGYKQKVQQESQTHPELPGSEQVTKVIRHFP 126
A +D S R+ + R F GY LPG+ Q T+ + HF
Sbjct: 436 FASDDMSRRLAMSQHISSRRAEFSTTASGSGYDMA----------LPGASQFTQALNHFT 485
Query: 127 QKQPVTDNAAPSKSRL 142
Q + +T A S L
Sbjct: 486 QFEALTHVAGTGSSHL 501
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 40 LSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKR---ENRKRDGGFQDQGF-S 95
+ IPPHM L +L+QYG ++ D T V+ R +++ R+ + GF
Sbjct: 85 IRNIPPHMQWEVLDGLLAQYGTVESCEQVNTDTETAVVNVRYGAKDQAREAMDKLNGFLM 144
Query: 96 EGYKQKV 102
E Y KV
Sbjct: 145 ENYALKV 151
>sp|B4KX02|SHEP_DROMO Protein alan shepard OS=Drosophila mojavensis GN=shep PE=3 SV=1
Length = 592
Score = 30.0 bits (66), Expect = 5.3, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 39 YLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEGY 98
Y++ +PPH L +L+++G++ STR+LR ++ + GF E
Sbjct: 322 YIANLPPHFKETDLEAMLAKFGQVV---------STRILRDQQMNSKGVGFARMESREKC 372
Query: 99 KQKVQ 103
+Q +Q
Sbjct: 373 EQIIQ 377
>sp|Q6NZN1|PPRC1_MOUSE Peroxisome proliferator-activated receptor gamma coactivator-related
protein 1 OS=Mus musculus GN=Pprc1 PE=1 SV=1
Length = 1644
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 21 KKQRLLEEAAKADQRGICYLSRIPPHMDPVKLRQILSQYGEIQRIYL 67
++QR+L++ ++R + ++ +IP M +L+Q S +GEI+ +
Sbjct: 1508 QRQRVLQKERAIEERRVVFIGKIPGRMTRSELKQRFSVFGEIEECTI 1554
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 40 LSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVL--------RKRENRKRDGGFQD 91
+ IPPH+ L +L+QYG ++ D T V+ + R+ ++ GFQ
Sbjct: 85 IRNIPPHLQWEVLDSLLAQYGTVENCEQVNTDTETAVVNVTYGNKDQARQAIEKLNGFQL 144
Query: 92 QGFS 95
+ +S
Sbjct: 145 ENYS 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,928,797
Number of Sequences: 539616
Number of extensions: 2327816
Number of successful extensions: 7667
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 7592
Number of HSP's gapped (non-prelim): 138
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)