Query 044302
Match_columns 830
No_of_seqs 725 out of 4972
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 13:18:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044302.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044302hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03210 Resistant to P. syrin 100.0 1.5E-68 3.3E-73 659.5 51.4 649 2-773 424-1100(1153)
2 PLN00113 leucine-rich repeat r 100.0 5.9E-40 1.3E-44 406.3 32.0 498 76-578 32-588 (968)
3 PLN00113 leucine-rich repeat r 100.0 7.5E-38 1.6E-42 387.6 27.5 439 111-558 93-589 (968)
4 KOG4658 Apoptotic ATPase [Sign 100.0 1.7E-32 3.8E-37 321.4 10.7 230 1-283 398-650 (889)
5 KOG4194 Membrane glycoprotein 100.0 1.6E-31 3.5E-36 280.5 5.8 358 184-547 80-446 (873)
6 KOG4194 Membrane glycoprotein 100.0 1.8E-31 3.9E-36 280.1 4.8 388 141-537 54-465 (873)
7 KOG0472 Leucine-rich repeat pr 100.0 2.7E-33 5.8E-38 281.9 -14.0 399 140-552 46-540 (565)
8 KOG0444 Cytoskeletal regulator 100.0 4.6E-31 9.9E-36 278.3 -5.6 362 139-557 7-379 (1255)
9 KOG0472 Leucine-rich repeat pr 99.9 4.2E-31 9.1E-36 266.2 -12.1 389 132-534 84-544 (565)
10 KOG0444 Cytoskeletal regulator 99.9 3.4E-29 7.5E-34 264.2 -4.1 359 112-478 8-377 (1255)
11 PLN03210 Resistant to P. syrin 99.9 2.2E-24 4.8E-29 267.4 27.7 344 201-579 554-911 (1153)
12 KOG0618 Serine/threonine phosp 99.9 8.7E-28 1.9E-32 266.0 -6.8 419 132-572 38-487 (1081)
13 KOG0618 Serine/threonine phosp 99.9 1.6E-26 3.5E-31 255.9 -5.5 413 141-578 23-468 (1081)
14 KOG4237 Extracellular matrix p 99.8 1.8E-20 3.9E-25 189.7 -0.8 282 146-428 53-358 (498)
15 PRK15387 E3 ubiquitin-protein 99.7 2.3E-17 5E-22 190.2 16.0 256 141-453 203-458 (788)
16 PRK15387 E3 ubiquitin-protein 99.7 9.5E-17 2.1E-21 185.2 18.5 256 160-474 201-456 (788)
17 PRK15370 E3 ubiquitin-protein 99.7 1.3E-16 2.7E-21 185.5 12.4 96 371-474 327-426 (754)
18 PRK15370 E3 ubiquitin-protein 99.7 8.7E-17 1.9E-21 186.8 10.6 246 139-429 178-428 (754)
19 KOG4237 Extracellular matrix p 99.7 2.5E-18 5.5E-23 174.3 -3.1 345 111-475 67-476 (498)
20 cd00116 LRR_RI Leucine-rich re 99.5 3.6E-16 7.9E-21 168.8 -2.2 255 297-551 21-318 (319)
21 KOG0617 Ras suppressor protein 99.5 4.2E-16 9.1E-21 140.4 -4.2 156 161-318 34-192 (264)
22 KOG0617 Ras suppressor protein 99.5 4.1E-16 9E-21 140.5 -4.5 179 361-576 25-205 (264)
23 cd00116 LRR_RI Leucine-rich re 99.4 2.8E-14 6E-19 154.1 -0.8 105 370-474 194-318 (319)
24 KOG4658 Apoptotic ATPase [Sign 99.2 1.8E-11 3.8E-16 145.1 6.7 206 221-430 516-731 (889)
25 KOG3207 Beta-tubulin folding c 99.0 5.7E-11 1.2E-15 123.2 0.2 86 462-551 245-337 (505)
26 KOG3207 Beta-tubulin folding c 99.0 7.8E-11 1.7E-15 122.2 0.6 212 319-530 118-339 (505)
27 KOG1259 Nischarin, modulator o 98.9 4.3E-10 9.2E-15 110.9 1.5 201 338-552 206-411 (490)
28 COG4886 Leucine-rich repeat (L 98.9 2.3E-09 5.1E-14 119.2 6.3 190 143-336 97-291 (394)
29 COG4886 Leucine-rich repeat (L 98.8 4.8E-09 1E-13 116.7 8.0 178 227-409 115-294 (394)
30 KOG1259 Nischarin, modulator o 98.8 1E-09 2.2E-14 108.2 2.1 134 180-316 282-416 (490)
31 KOG0532 Leucine-rich repeat (L 98.8 1.6E-10 3.6E-15 123.4 -4.8 168 163-335 78-247 (722)
32 KOG0532 Leucine-rich repeat (L 98.8 3E-10 6.5E-15 121.4 -4.6 189 165-404 55-246 (722)
33 PF14580 LRR_9: Leucine-rich r 98.7 4.5E-09 9.8E-14 100.2 2.1 127 438-579 17-147 (175)
34 KOG1909 Ran GTPase-activating 98.7 6E-10 1.3E-14 112.8 -4.3 242 294-552 25-310 (382)
35 PF14580 LRR_9: Leucine-rich r 98.7 9E-09 2E-13 98.1 3.6 87 172-261 9-97 (175)
36 KOG1909 Ran GTPase-activating 98.7 2.1E-09 4.5E-14 108.9 -2.2 237 274-530 29-311 (382)
37 KOG4341 F-box protein containi 98.5 4E-09 8.8E-14 109.1 -6.5 84 205-288 138-229 (483)
38 PRK15386 type III secretion pr 98.4 1.1E-06 2.4E-11 94.0 11.3 61 368-433 51-111 (426)
39 KOG0531 Protein phosphatase 1, 98.4 4.2E-08 9.1E-13 109.4 -0.8 194 136-334 69-267 (414)
40 PRK15386 type III secretion pr 98.4 1.3E-06 2.9E-11 93.4 9.3 74 388-473 48-122 (426)
41 KOG0531 Protein phosphatase 1, 98.3 9.4E-08 2E-12 106.6 -0.8 190 347-550 73-265 (414)
42 KOG2120 SCF ubiquitin ligase, 98.3 1E-08 2.2E-13 101.4 -7.7 156 370-528 186-349 (419)
43 PLN03150 hypothetical protein; 98.3 1.6E-06 3.5E-11 101.2 8.3 110 442-558 420-533 (623)
44 KOG2120 SCF ubiquitin ligase, 98.2 2.6E-08 5.7E-13 98.6 -6.8 152 182-333 185-349 (419)
45 PLN03150 hypothetical protein; 98.1 3.9E-06 8.4E-11 98.1 7.8 105 394-504 420-527 (623)
46 PF13855 LRR_8: Leucine rich r 98.1 2.9E-06 6.3E-11 66.2 4.1 57 370-426 2-59 (61)
47 PF13855 LRR_8: Leucine rich r 98.1 3.4E-06 7.3E-11 65.9 4.3 61 392-452 1-61 (61)
48 KOG4341 F-box protein containi 98.1 8E-08 1.7E-12 99.7 -6.3 229 201-429 160-414 (483)
49 KOG1859 Leucine-rich repeat pr 98.1 1.6E-07 3.5E-12 103.5 -5.5 128 370-530 165-292 (1096)
50 KOG2982 Uncharacterized conser 98.0 1.6E-06 3.4E-11 86.2 0.6 61 342-402 93-156 (418)
51 KOG1859 Leucine-rich repeat pr 97.9 1.8E-07 3.9E-12 103.1 -8.2 177 134-313 104-293 (1096)
52 KOG2982 Uncharacterized conser 97.8 1.3E-05 2.9E-10 79.8 3.8 205 368-578 70-285 (418)
53 PF12799 LRR_4: Leucine Rich r 97.7 3.2E-05 6.9E-10 55.3 3.0 41 517-558 1-41 (44)
54 COG5238 RNA1 Ran GTPase-activa 97.5 1.2E-05 2.6E-10 79.1 -1.8 94 438-532 212-318 (388)
55 PF12799 LRR_4: Leucine Rich r 97.5 8.8E-05 1.9E-09 53.1 2.7 40 492-533 1-40 (44)
56 COG5238 RNA1 Ran GTPase-activa 97.3 7.7E-05 1.7E-09 73.5 1.0 87 368-454 29-134 (388)
57 KOG1644 U2-associated snRNP A' 97.3 0.00057 1.2E-08 64.9 6.3 56 161-216 43-99 (233)
58 KOG1644 U2-associated snRNP A' 97.2 0.00054 1.2E-08 65.1 5.4 103 180-285 40-150 (233)
59 KOG4579 Leucine-rich repeat (L 97.1 1.7E-05 3.6E-10 70.1 -5.2 57 161-217 54-112 (177)
60 KOG3665 ZYG-1-like serine/thre 97.1 0.00021 4.5E-09 83.5 2.1 130 252-382 122-263 (699)
61 KOG3665 ZYG-1-like serine/thre 96.9 0.0005 1.1E-08 80.4 2.8 154 392-550 122-285 (699)
62 KOG2739 Leucine-rich acidic nu 96.8 0.00073 1.6E-08 67.0 2.8 107 461-576 41-158 (260)
63 KOG1947 Leucine rich repeat pr 96.7 0.00023 5E-09 81.5 -2.2 236 321-576 187-442 (482)
64 KOG4579 Leucine-rich repeat (L 96.6 0.00015 3.3E-09 64.2 -3.5 112 162-275 29-145 (177)
65 KOG1947 Leucine rich repeat pr 96.5 0.00028 6.1E-09 80.8 -3.4 36 465-504 403-439 (482)
66 KOG2123 Uncharacterized conser 95.5 0.00057 1.2E-08 67.8 -5.5 84 462-555 18-103 (388)
67 KOG2123 Uncharacterized conser 95.5 0.00057 1.2E-08 67.8 -5.5 96 138-234 18-123 (388)
68 PF13306 LRR_5: Leucine rich r 95.2 0.071 1.5E-06 48.4 7.6 19 130-148 3-21 (129)
69 KOG2739 Leucine-rich acidic nu 95.1 0.01 2.2E-07 59.1 1.7 63 274-336 64-130 (260)
70 PF13306 LRR_5: Leucine rich r 94.5 0.15 3.3E-06 46.2 7.9 13 342-354 8-20 (129)
71 PF00560 LRR_1: Leucine Rich R 94.2 0.018 3.9E-07 34.2 0.6 20 518-537 1-20 (22)
72 PF00560 LRR_1: Leucine Rich R 93.8 0.035 7.6E-07 32.9 1.3 21 183-203 1-21 (22)
73 PF13504 LRR_7: Leucine rich r 92.4 0.073 1.6E-06 29.3 1.1 13 519-531 3-15 (17)
74 PF13504 LRR_7: Leucine rich r 91.1 0.13 2.7E-06 28.4 1.2 17 540-557 1-17 (17)
75 KOG4308 LRR-containing protein 89.0 0.0021 4.6E-08 72.0 -13.9 117 435-552 167-302 (478)
76 PF07725 LRR_3: Leucine Rich R 87.6 0.5 1.1E-05 27.1 1.9 19 183-201 1-19 (20)
77 KOG0473 Leucine-rich repeat pr 86.7 0.044 9.5E-07 53.5 -4.4 86 130-216 33-122 (326)
78 smart00369 LRR_TYP Leucine-ric 86.5 0.53 1.1E-05 29.1 1.8 21 516-536 1-21 (26)
79 smart00370 LRR Leucine-rich re 86.5 0.53 1.1E-05 29.1 1.8 21 516-536 1-21 (26)
80 KOG4308 LRR-containing protein 85.7 0.0073 1.6E-07 67.7 -12.0 92 438-530 202-303 (478)
81 KOG0473 Leucine-rich repeat pr 85.6 0.022 4.9E-07 55.4 -7.0 80 160-239 42-122 (326)
82 KOG3864 Uncharacterized conser 82.6 0.18 3.9E-06 48.5 -2.3 36 440-475 101-137 (221)
83 smart00369 LRR_TYP Leucine-ric 79.8 1.4 3.1E-05 27.1 1.8 22 439-460 1-22 (26)
84 smart00370 LRR Leucine-rich re 79.8 1.4 3.1E-05 27.1 1.8 22 439-460 1-22 (26)
85 KOG3864 Uncharacterized conser 77.0 0.5 1.1E-05 45.5 -1.3 88 174-261 92-185 (221)
86 smart00364 LRR_BAC Leucine-ric 74.1 2.2 4.7E-05 26.4 1.4 18 517-534 2-19 (26)
87 smart00364 LRR_BAC Leucine-ric 70.7 2.6 5.6E-05 26.1 1.2 16 183-198 3-18 (26)
88 smart00367 LRR_CC Leucine-rich 63.6 5.2 0.00011 24.6 1.6 15 540-554 2-16 (26)
89 smart00365 LRR_SD22 Leucine-ri 60.2 6 0.00013 24.6 1.4 16 182-197 2-17 (26)
90 PF13516 LRR_6: Leucine Rich r 49.8 8.3 0.00018 23.1 0.8 13 517-529 2-14 (24)
91 smart00368 LRR_RI Leucine rich 34.0 34 0.00073 21.5 1.8 14 517-530 2-15 (28)
92 KOG4242 Predicted myosin-I-bin 27.0 2.5E+02 0.0055 31.3 8.0 20 275-294 165-184 (553)
93 KOG3763 mRNA export factor TAP 22.3 35 0.00077 38.4 0.6 17 654-670 440-456 (585)
94 PF05725 FNIP: FNIP Repeat; I 20.5 1.7E+02 0.0037 20.6 3.6 12 157-168 9-20 (44)
No 1
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=100.00 E-value=1.5e-68 Score=659.45 Aligned_cols=649 Identities=30% Similarity=0.481 Sum_probs=463.4
Q ss_pred Ccceecccccch-hhhhhhhhhcccCCCCChHHHHHHhhhcCCCccchhhhhccCcceEEeCCCceehhHHHHHHHHHHH
Q 044302 2 SILQISFDGLQD-SEKKIFLDVACFFKQKNRDYVTKILEGYGFFPVIGIEVLIERSLLTVDDCNTLGMHDLLQELGQLIV 80 (830)
Q Consensus 2 ~iL~lSYd~L~~-~~K~cFl~~a~fp~~~~~~~l~~~w~a~g~~~~~~~~~L~~~~li~~~~~~~v~mHDll~d~a~~i~ 80 (830)
++|++|||+|++ .+|.||+||||||++++++.+..++.++|+-++.+++.|++||||++. .++++||||+||||++|+
T Consensus 424 ~~L~~SYd~L~~~~~k~~Fl~ia~ff~~~~~~~v~~~l~~~~~~~~~~l~~L~~ksLi~~~-~~~~~MHdLl~~~~r~i~ 502 (1153)
T PLN03210 424 KTLRVSYDGLNNKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVR-EDIVEMHSLLQEMGKEIV 502 (1153)
T ss_pred HHHHHhhhccCccchhhhhheehhhcCCCCHHHHHHHHHhcCCCchhChHHHHhcCCEEEc-CCeEEhhhHHHHHHHHHH
Confidence 589999999986 599999999999999999988888888888899999999999999998 689999999999999999
Q ss_pred hhhccCCCCCceecccchhhHHHhhcCcCcccEEEEEeeccCCCccccccChHhhhCCCCCceEEEcCc----------c
Q 044302 81 TRQSLEEPGKRSRLWRQEEVRHVLTKNAGSEVVEGMIIDDHFFPENEMHLSAKAFSLMTNLRLLKIGNV----------Q 150 (830)
Q Consensus 81 ~~e~~~~~~~~~~l~~~~~i~~vl~~~~~~~~v~~i~l~~~~~~~~~~~~~~~~f~~l~~Lr~L~l~~~----------~ 150 (830)
++++ .+|++++++|+++|+++|+..++|++++++|+++.. +.. +..+...+|.+|++|+.|.+..+ +
T Consensus 503 ~~~~-~~~~~r~~l~~~~di~~vl~~~~g~~~v~~i~l~~~-~~~-~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~ 579 (1153)
T PLN03210 503 RAQS-NEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDID-EID-ELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWH 579 (1153)
T ss_pred Hhhc-CCCCcceeEeCHHHHHHHHHhCcccceeeEEEeccC-ccc-eeeecHHHHhcCccccEEEEecccccccccceee
Confidence 9998 799999999999999999999999999999999998 775 78899999999999999999654 3
Q ss_pred cCCCccccccCcceEEEecCCCCCCCCCCCCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCCCCCce
Q 044302 151 LPKGLEYLSNKLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNL 230 (830)
Q Consensus 151 l~~~~~~l~~~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L 230 (830)
+++++..+|.+||+|+|.+|+++.+|..+.+.+|++|+|++|.++.+|.++..+++|+.|+|+++..+..+|+++.+++|
T Consensus 580 lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~L 659 (1153)
T PLN03210 580 LPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNL 659 (1153)
T ss_pred cCcchhhcCcccEEEEecCCCCCCCCCcCCccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCccccCCcc
Confidence 67788899999999999999999999999999999999999999999999999999999999999888889999999999
Q ss_pred eEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccccCCCCCccccceEeeccccc
Q 044302 231 EVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETD 310 (830)
Q Consensus 231 ~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~ 310 (830)
++|++++|..+..+|.+++++++|+.|++++|+.++.+|..+.+++|+.|++++|.....+|.. ..+|+.|++++|.
T Consensus 660 e~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~ 736 (1153)
T PLN03210 660 ETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETA 736 (1153)
T ss_pred cEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCc
Confidence 9999999999999999999999999999999999999999888999999999999888777754 4578889999999
Q ss_pred ccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEEecCCc-ccccCcccC
Q 044302 311 IKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTS-ITEVPSSIE 389 (830)
Q Consensus 311 i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~-i~~l~~~~~ 389 (830)
+..+|..+ .+++|+.|.+.++.... ++..+..++.+ ....+++|+.|+|++|. +..+|.+++
T Consensus 737 i~~lP~~~-~l~~L~~L~l~~~~~~~-l~~~~~~l~~~---------------~~~~~~sL~~L~Ls~n~~l~~lP~si~ 799 (1153)
T PLN03210 737 IEEFPSNL-RLENLDELILCEMKSEK-LWERVQPLTPL---------------MTMLSPSLTRLFLSDIPSLVELPSSIQ 799 (1153)
T ss_pred cccccccc-cccccccccccccchhh-ccccccccchh---------------hhhccccchheeCCCCCCccccChhhh
Confidence 88888654 45666666665543211 00000000000 01113445555555543 335555566
Q ss_pred CCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCcccCCCcccccCCCCcEEE
Q 044302 390 LLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATRRPPCSIFHMKNLKTLS 469 (830)
Q Consensus 390 ~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~~~l~~l~~L~~L~ 469 (830)
++++|+.|+|++|..++.+|..+ .+++|+.|++++|..+..+|.. .++|++|+|++|.+..+|.+
T Consensus 800 ~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~iP~s----------- 864 (1153)
T PLN03210 800 NLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEEVPWW----------- 864 (1153)
T ss_pred CCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCccChHH-----------
Confidence 66666666666666555555544 4556666666666555544432 23444444444444444444
Q ss_pred cCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCC-CCcccCcccCCCCccCEeecc
Q 044302 470 FSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSEN-NFVTLPASISGLFNLEYLKLE 548 (830)
Q Consensus 470 L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n-~l~~lp~~l~~L~~L~~L~L~ 548 (830)
+..+++|+.|+|++| ++..+|..+..+++|+.|+++
T Consensus 865 -------------------------------------------i~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~ 901 (1153)
T PLN03210 865 -------------------------------------------IEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFS 901 (1153)
T ss_pred -------------------------------------------HhcCCCCCEEECCCCCCcCccCcccccccCCCeeecC
Confidence 444444444444442 344555555566677777777
Q ss_pred ccccccccC--CCCCCcceeeccCCcccccccccccccCcccceeeecchhhhcCcchhhhHHHHHHhhhccCCCCcceE
Q 044302 549 DCKRLQSLP--QLPPNVHNVRLNGCASLVTLLGVLRLRKSSWTTIYCIDSLKLLGKNDLATSMLREHLEAVSAPDSKLSI 626 (830)
Q Consensus 549 ~c~~l~~lp--~lp~sL~~L~i~~C~~L~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (830)
+|+.|+.++ ..|.++.. +.++. ...++ ......+.+|.+..+.. . ++.. .....+
T Consensus 902 ~C~~L~~~~l~~~~~~~~~--~~~n~-~~~~p-----~~~~l~f~nC~~L~~~a--------~----l~~~---~~~~~~ 958 (1153)
T PLN03210 902 DCGALTEASWNGSPSEVAM--ATDNI-HSKLP-----STVCINFINCFNLDQEA--------L----LQQQ---SIFKQL 958 (1153)
T ss_pred CCcccccccCCCCchhhhh--hcccc-cccCC-----chhccccccccCCCchh--------h----hccc---ccceEE
Confidence 777665443 22222211 11110 00111 11234567776643100 0 1111 112357
Q ss_pred eeCCCCCCCcccccCCCceEE-EEcCCCCCCCccEEEEEEEEEEeeCCCCCccccccccCccceeeEEeeCCcccceeec
Q 044302 627 VVPGSEIPKWFMYQNEGSSIT-VTRPSYLHNVNKVVGYAVCCVFHVPKHSTGIRRTTWKGHSFLTHLLFCSMDCSSLFYG 705 (830)
Q Consensus 627 ~~pg~~iP~wf~~~~~g~s~~-~~~~~~~~~~~~~~g~~~c~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (830)
++||.++|+||.||+.|++++ |.+|+.|+ ...+.||++|+|+++....+.. ....+.|.|.+.+.......
T Consensus 959 ~l~g~evp~~f~hr~~g~sl~~i~l~~~~~-~~~~~~f~~c~v~~~~~~~~~~-----~~~~~~~~c~~~~~~~~~~~-- 1030 (1153)
T PLN03210 959 ILSGEEVPSYFTHRTTGASLTNIPLLHISP-CQPFFRFRACAVVDSESFFIIS-----VSFDIQVCCRFIDRLGNHFD-- 1030 (1153)
T ss_pred ECCCccCchhccCCcccceeeeeccCCccc-CCCccceEEEEEEecCccccCC-----CceeEEEEEEEECCCCCccc--
Confidence 899999999999999999998 99999888 6789999999999766542111 11245566776542111110
Q ss_pred cccccCCCCCCCCeEEEEEEeccccc----------cc--ccccccceEEEEEeccccCCCCceEEEEeceeEeeccccc
Q 044302 706 IDFRDKFGHRGSDHLWLLFLSRAECD----------EY--KWHFESNHFKLKFANHSAVSNTGLKVKRCGFHPVYKQEVE 773 (830)
Q Consensus 706 ~~~~~~~~~~~sdh~~~~~~~~~~~~----------~~--~~~~~~~~~~~~f~~~~~~~~~~~~vk~cGv~lvy~~~~~ 773 (830)
. ...+|+|+.|....++. +. ......+|+.+.|+.. .....++||+|||+++|+.+..
T Consensus 1031 -----~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~--~~~~~~~~~~cg~~~~~~~~~~ 1100 (1153)
T PLN03210 1031 -----S---PYQPHVFSVTKKGSHLVIFDCCFPLNEDNAPLAELNYDHVDIQFRLT--NKNSQLKLKGCGIRLSEDDSSL 1100 (1153)
T ss_pred -----c---CCCceeEeeeccccceEEecccccccccccchhccCCceeeEEEEEe--cCCCCeEEEeeeEEEeccCCCc
Confidence 0 12455555554422110 00 0112345666766321 1223479999999999966544
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.9e-40 Score=406.34 Aligned_cols=498 Identities=21% Similarity=0.244 Sum_probs=346.0
Q ss_pred HHHHHhhhccCCCCCceecccc-hhhHHHhhcC-cCcccEEEEEeeccCCCccccccChHhhhCCCCCceEEEcCcccCC
Q 044302 76 GQLIVTRQSLEEPGKRSRLWRQ-EEVRHVLTKN-AGSEVVEGMIIDDHFFPENEMHLSAKAFSLMTNLRLLKIGNVQLPK 153 (830)
Q Consensus 76 a~~i~~~e~~~~~~~~~~l~~~-~~i~~vl~~~-~~~~~v~~i~l~~~~~~~~~~~~~~~~f~~l~~Lr~L~l~~~~l~~ 153 (830)
+--.+.++.+.+|+++.+.|+. .+.|.+.... ....+|+.+.+... .+. .. .+.+|..+++|+.|++++|++.+
T Consensus 32 ~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~-~i~--~~-~~~~~~~l~~L~~L~Ls~n~~~~ 107 (968)
T PLN00113 32 ELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGK-NIS--GK-ISSAIFRLPYIQTINLSNNQLSG 107 (968)
T ss_pred HHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCCCCcEEEEEecCC-Ccc--cc-CChHHhCCCCCCEEECCCCccCC
Confidence 3334444555678788888964 3455432111 12347888877765 442 22 25689999999999999998753
Q ss_pred ----CccccccCcceEEEecCCCCCCCCCCCCCCceEEEccCCChh-hcccCCCCCCcccEEEccCCCCCCCCC-CCCCC
Q 044302 154 ----GLEYLSNKLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSRIE-ELWKGIKPLNTLKVMKLSHSENLIKTP-NFIEV 227 (830)
Q Consensus 154 ----~~~~l~~~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~i~-~l~~~~~~l~~L~~L~L~~~~~~~~~~-~~~~l 227 (830)
.+.....+||+|++++|.+....+...+.+|++|+|++|.+. .+|..++.+++|++|+|++|......| .+.++
T Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 187 (968)
T PLN00113 108 PIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNL 187 (968)
T ss_pred cCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhC
Confidence 233223589999999998864333345788999999999887 568788889999999999887655444 58888
Q ss_pred CceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccc-cCcccEEeccCcccccccCCCCCccccceEeec
Q 044302 228 PNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIF-MKSLKTLVLSGCLKLRKFPHVGGSMECLQELFL 306 (830)
Q Consensus 228 ~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L 306 (830)
++|++|++++|.....+|..++++++|++|++++|.....+|..+. +++|++|++++|......|..++++++|+.|++
T Consensus 188 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 267 (968)
T PLN00113 188 TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFL 267 (968)
T ss_pred cCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEEC
Confidence 9999999988877778888888888999999888766667777766 888888888888887778888888888888888
Q ss_pred cccccc-ccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCc-ccCCCCCcEEEecCCccc-c
Q 044302 307 DETDIK-EMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQ-IVGMEGLSELYLDGTSIT-E 383 (830)
Q Consensus 307 ~~~~i~-~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~-~~~l~~L~~L~L~~~~i~-~ 383 (830)
++|.+. .+|..+..+++|+.|++++|.....+|..+..+++|+.|++++|.....+|. +..+++|+.|++++|.+. .
T Consensus 268 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 347 (968)
T PLN00113 268 YQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGE 347 (968)
T ss_pred cCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCc
Confidence 888876 5777788888888888888877777777777777888888877776665554 455677777777777665 4
Q ss_pred cCcccCCCCCccEEecCCccCccccc------------------------ccccCCCCCCEEeccCCCCCCccCcccCCC
Q 044302 384 VPSSIELLPGIELLNLNDCKNLVRLP------------------------RSINGLKALKTLSLSGCCKLENVPDTLGQV 439 (830)
Q Consensus 384 l~~~~~~l~~L~~L~L~~~~~l~~l~------------------------~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l 439 (830)
+|..++.+++|+.|++++|.....+| ..+..+++|+.|++++|.....+|..+..+
T Consensus 348 ~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l 427 (968)
T PLN00113 348 IPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKL 427 (968)
T ss_pred CChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcC
Confidence 56566666666666666665554444 444455556666666655555555566666
Q ss_pred CCccEEecCCCccc-CCCcccccCCCCcEEEcCCCCCCCCCCc------------------cccCCCCCCCCccCeecCC
Q 044302 440 ESLEELDISGTATR-RPPCSIFHMKNLKTLSFSGCNGPPSTAS------------------SLMLPSLSGLCSLTKLDLS 500 (830)
Q Consensus 440 ~~L~~L~L~~n~i~-~l~~~l~~l~~L~~L~L~~~~~~~~~~~------------------~~~l~~l~~l~~L~~L~Ls 500 (830)
++|+.|++++|.+. .++..+..+++|+.|++++|+....... +.....+.++++|+.|+++
T Consensus 428 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls 507 (968)
T PLN00113 428 PLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLS 507 (968)
T ss_pred CCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECc
Confidence 66666666666655 3344445566666666666654321110 0011124556677777777
Q ss_pred CCCCCCCccccccCCCCCCCEEeCCCCCCc-ccCcccCCCCccCEeeccccccccccCCC---CCCcceeeccCCccccc
Q 044302 501 DCGLGEGAILSDIGNLHSLKALYLSENNFV-TLPASISGLFNLEYLKLEDCKRLQSLPQL---PPNVHNVRLNGCASLVT 576 (830)
Q Consensus 501 ~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~-~lp~~l~~L~~L~~L~L~~c~~l~~lp~l---p~sL~~L~i~~C~~L~~ 576 (830)
+|.+. +.+|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|+....+|.. .++|+.|++++|+-...
T Consensus 508 ~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 508 ENKLS-GEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred CCcce-eeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 77775 556777777788888888888777 56777778888888888888766666642 25688888888875555
Q ss_pred cc
Q 044302 577 LL 578 (830)
Q Consensus 577 ~~ 578 (830)
++
T Consensus 587 ~p 588 (968)
T PLN00113 587 LP 588 (968)
T ss_pred CC
Confidence 54
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.5e-38 Score=387.58 Aligned_cols=439 Identities=19% Similarity=0.226 Sum_probs=298.4
Q ss_pred ccEEEEEeeccCCCccccccChHhhhCCCCCceEEEcCcccCCCcc-ccccCcceEEEecCCCC-CCCCCC-CCCCceEE
Q 044302 111 EVVEGMIIDDHFFPENEMHLSAKAFSLMTNLRLLKIGNVQLPKGLE-YLSNKLRLLVWHQYPLK-SLPSNL-QLDKIVEF 187 (830)
Q Consensus 111 ~~v~~i~l~~~~~~~~~~~~~~~~f~~l~~Lr~L~l~~~~l~~~~~-~l~~~Lr~L~l~~~~l~-~lp~~~-~l~~L~~L 187 (830)
..++.+.+... .. ...++...|.++++||+|++++|.+.+.+. ....+|++|++++|.+. .+|..+ .+.+|++|
T Consensus 93 ~~L~~L~Ls~n-~~--~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 169 (968)
T PLN00113 93 PYIQTINLSNN-QL--SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVL 169 (968)
T ss_pred CCCCEEECCCC-cc--CCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEE
Confidence 34666666544 33 235677777788888888888887754321 12246777777777765 456555 67777777
Q ss_pred EccCCChh-hcccCCCCCCcccEEEccCCCCCCCCC-CCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCC
Q 044302 188 EMCYSRIE-ELWKGIKPLNTLKVMKLSHSENLIKTP-NFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSL 265 (830)
Q Consensus 188 ~L~~n~i~-~l~~~~~~l~~L~~L~L~~~~~~~~~~-~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l 265 (830)
+|++|.+. .+|..+.++++|++|+|++|.....+| .+.++++|++|++++|.....+|..++++++|++|++++|...
T Consensus 170 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 249 (968)
T PLN00113 170 DLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLT 249 (968)
T ss_pred ECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceec
Confidence 77777765 456667777777777777776544433 4666777777777766655566666666677777777665544
Q ss_pred ccCCcccc-cCcccEEeccCcccccccCCCCCccccceEeeccccccc-ccccchhcccCCcEEeccCCCCCCCCccccc
Q 044302 266 TTLPGEIF-MKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETDIK-EMPLSIEHLSGLILLTLKYCKNLSSLPVTIS 343 (830)
Q Consensus 266 ~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~i~-~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~ 343 (830)
..+|..+. +++|++|++++|.+....|..+..+++|+.|++++|.+. .+|..+..+++|+.|++++|......|..+.
T Consensus 250 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 329 (968)
T PLN00113 250 GPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALT 329 (968)
T ss_pred cccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHh
Confidence 45555544 666666666666555555555555666666666655554 4455555555555555555555555555555
Q ss_pred cCccCcEEeecCCCCCCcCCc-------------------------ccCCCCCcEEEecCCccc-ccCcccCCCCCccEE
Q 044302 344 SLKCLRTLKLSGCSKLKKFPQ-------------------------IVGMEGLSELYLDGTSIT-EVPSSIELLPGIELL 397 (830)
Q Consensus 344 ~l~~L~~L~L~~~~~~~~~~~-------------------------~~~l~~L~~L~L~~~~i~-~l~~~~~~l~~L~~L 397 (830)
.+++|+.|++++|.....+|. +..+++|+.|++++|.+. .+|..+..+++|+.|
T Consensus 330 ~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L 409 (968)
T PLN00113 330 SLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRV 409 (968)
T ss_pred cCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEE
Confidence 555555555555544443332 333455555555555554 456667788999999
Q ss_pred ecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCccc------------------------
Q 044302 398 NLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATR------------------------ 453 (830)
Q Consensus 398 ~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~------------------------ 453 (830)
++++|.....+|..+..+++|+.|++++|.....++..+..+++|+.|++++|.+.
T Consensus 410 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~ 489 (968)
T PLN00113 410 RLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSG 489 (968)
T ss_pred ECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCC
Confidence 99999988889999999999999999998888777766666666666666666544
Q ss_pred CCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCCCCc-cc
Q 044302 454 RPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFV-TL 532 (830)
Q Consensus 454 ~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~-~l 532 (830)
.+|..+..+++|+.|++++|..... ....+.++++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++. .+
T Consensus 490 ~~~~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 563 (968)
T PLN00113 490 AVPRKLGSLSELMQLKLSENKLSGE-----IPDELSSCKKLVSLDLSHNQLS-GQIPASFSEMPVLSQLDLSQNQLSGEI 563 (968)
T ss_pred ccChhhhhhhccCEEECcCCcceee-----CChHHcCccCCCEEECCCCccc-ccCChhHhCcccCCEEECCCCcccccC
Confidence 3334444555566666666554321 2234788999999999999998 778999999999999999999998 78
Q ss_pred CcccCCCCccCEeeccccccccccCC
Q 044302 533 PASISGLFNLEYLKLEDCKRLQSLPQ 558 (830)
Q Consensus 533 p~~l~~L~~L~~L~L~~c~~l~~lp~ 558 (830)
|..+..+++|+.|++++|+....+|.
T Consensus 564 p~~l~~l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 564 PKNLGNVESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred ChhHhcCcccCEEeccCCcceeeCCC
Confidence 99999999999999999998888885
No 4
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=321.40 Aligned_cols=230 Identities=26% Similarity=0.362 Sum_probs=146.5
Q ss_pred CCcceecccccchhhhhhhhhhcccCCCC--ChHHHHHHhhhcCCC------------ccchhhhhccCcceEEeCC---
Q 044302 1 MSILQISFDGLQDSEKKIFLDVACFFKQK--NRDYVTKILEGYGFF------------PVIGIEVLIERSLLTVDDC--- 63 (830)
Q Consensus 1 ~~iL~lSYd~L~~~~K~cFl~~a~fp~~~--~~~~l~~~w~a~g~~------------~~~~~~~L~~~~li~~~~~--- 63 (830)
++||++|||+||+++|.||||||+||+|| +++.|+.+|+||||+ ++.++.+||.+||++..++
T Consensus 398 ~~iLklSyd~L~~~lK~CFLycalFPED~~I~~e~Li~yWiaEGfi~~~~~~~~~~d~G~~~i~~LV~~~Ll~~~~~~~~ 477 (889)
T KOG4658|consen 398 LPILKLSYDNLPEELKSCFLYCALFPEDYEIKKEKLIEYWIAEGFIDPLDGGETAEDVGYDYIEELVRASLLIEERDEGR 477 (889)
T ss_pred HHhhhccHhhhhHHHHHHHHhhccCCcccccchHHHHHHHHhccCcCccccccchhcchHHHHHHHHHHHHHhhcccccc
Confidence 37899999999999999999999999997 669999999999988 2466888999999997642
Q ss_pred -CceehhHHHHHHHHHHHhhhccCCCCCceecccchhhHHHhhcCcCcccEEEEEeeccCCCccccccChHhhhCCCCCc
Q 044302 64 -NTLGMHDLLQELGQLIVTRQSLEEPGKRSRLWRQEEVRHVLTKNAGSEVVEGMIIDDHFFPENEMHLSAKAFSLMTNLR 142 (830)
Q Consensus 64 -~~v~mHDll~d~a~~i~~~e~~~~~~~~~~l~~~~~i~~vl~~~~~~~~v~~i~l~~~~~~~~~~~~~~~~f~~l~~Lr 142 (830)
.+++|||+|||||.+||++-+.+... . +.-+.. ... +
T Consensus 478 ~~~~kmHDvvRe~al~ias~~~~~~e~---~----------------------iv~~~~-~~~---~------------- 515 (889)
T KOG4658|consen 478 KETVKMHDVVREMALWIASDFGKQEEN---Q----------------------IVSDGV-GLS---E------------- 515 (889)
T ss_pred eeEEEeeHHHHHHHHHHhccccccccc---e----------------------EEECCc-Ccc---c-------------
Confidence 56899999999999999854321100 0 000000 000 0
Q ss_pred eEEEcCcccCCCccccccCcceEEEecCCCCCCCCCCCCCCceEEEccCCC--hhhccc-CCCCCCcccEEEccCCCCCC
Q 044302 143 LLKIGNVQLPKGLEYLSNKLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSR--IEELWK-GIKPLNTLKVMKLSHSENLI 219 (830)
Q Consensus 143 ~L~l~~~~l~~~~~~l~~~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~--i~~l~~-~~~~l~~L~~L~L~~~~~~~ 219 (830)
.+.. .. +...|...+.++.+..++.....+.|+.|-+..|. +..++. .|..++.|++|||++|....
T Consensus 516 --------~~~~-~~-~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~ 585 (889)
T KOG4658|consen 516 --------IPQV-KS-WNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLS 585 (889)
T ss_pred --------cccc-cc-hhheeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccC
Confidence 0000 00 12556666666666666665555566666666664 444433 25556666666666665555
Q ss_pred CCCC-CCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccc-cCcccEEecc
Q 044302 220 KTPN-FIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIF-MKSLKTLVLS 283 (830)
Q Consensus 220 ~~~~-~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~ 283 (830)
.+|. ++.+-+|++|++++ +.+..+|.+++++++|.+|++..+..+..+|.... +.+|++|.+.
T Consensus 586 ~LP~~I~~Li~LryL~L~~-t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~ 650 (889)
T KOG4658|consen 586 KLPSSIGELVHLRYLDLSD-TGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLP 650 (889)
T ss_pred cCChHHhhhhhhhcccccC-CCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEee
Confidence 5443 55566666666665 44556666666666666666665444444444333 5555555544
No 5
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=280.49 Aligned_cols=358 Identities=21% Similarity=0.211 Sum_probs=177.7
Q ss_pred ceEEEccCCChhhc-ccCCCCCCcccEEEccCCCCCCCCCCCCCCC-ceeEEeeeCCcccccccccccCCCCccEEecCC
Q 044302 184 IVEFEMCYSRIEEL-WKGIKPLNTLKVMKLSHSENLIKTPNFIEVP-NLEVLDLEGCTRLREIHSSLVRHNKLILLNLKG 261 (830)
Q Consensus 184 L~~L~L~~n~i~~l-~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~-~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~ 261 (830)
-+.|++++|++.++ +..|.++++|+.+++.+|. +..+|.|+... +|++|+|.+|.....-.+++..++.|+.|+|+.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~-Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNE-LTRIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccch-hhhcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 34444444444443 2234444455555444442 33444444332 255555554333333334444455555555555
Q ss_pred CCCCccCCcccc--cCcccEEeccCcccccccCCCCCccccceEeeccccccccccc-chhcccCCcEEeccCCCCCCCC
Q 044302 262 CTSLTTLPGEIF--MKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETDIKEMPL-SIEHLSGLILLTLKYCKNLSSL 338 (830)
Q Consensus 262 c~~l~~lp~~~~--l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~-~l~~l~~L~~L~L~~~~~~~~~ 338 (830)
+.+..+|...+ -.++++|+|++|.+...-...|.++.+|..|.|+.|.++.+|. .|.++++|+.|+|..|.+...-
T Consensus 159 -N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 159 -NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred -chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 44444444443 2455555555555555555555555555555666666665555 3334555555555555544333
Q ss_pred ccccccCccCcEEeecCCCCCCcCC-cccCCCCCcEEEecCCcccccCc-ccCCCCCccEEecCCccCcccccccccCCC
Q 044302 339 PVTISSLKCLRTLKLSGCSKLKKFP-QIVGMEGLSELYLDGTSITEVPS-SIELLPGIELLNLNDCKNLVRLPRSINGLK 416 (830)
Q Consensus 339 ~~~l~~l~~L~~L~L~~~~~~~~~~-~~~~l~~L~~L~L~~~~i~~l~~-~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~ 416 (830)
..+|..+++|+.|.+..|...+--. .+.++.++++|+|..|++..+.. ++.+++.|+.|+|+.|.+...-++.....+
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 3445555555555555554433222 24455555555555555554433 245555555555555555555555555555
Q ss_pred CCCEEeccCCCCCCccCcccCCCCCccEEecCCCcccCCCcc-cccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccC
Q 044302 417 ALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATRRPPCS-IFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLT 495 (830)
Q Consensus 417 ~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~~~-l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~ 495 (830)
+|++|+|+.|.+...-++.|..+..|++|.|+.|.+..+... +..+++|++|+|+.|.+.... .+ ....|.++++|+
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~I-ED-aa~~f~gl~~Lr 395 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCI-ED-AAVAFNGLPSLR 395 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEE-ec-chhhhccchhhh
Confidence 555555555555555555555555555555555555544332 223555555555555432110 00 112245555555
Q ss_pred eecCCCCCCCCCccccccCCCCCCCEEeCCCCCCcccC-cccCCCCccCEeec
Q 044302 496 KLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFVTLP-ASISGLFNLEYLKL 547 (830)
Q Consensus 496 ~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~~lp-~~l~~L~~L~~L~L 547 (830)
.|++.+|++. ......|.++++|++|+|.+|.|.+|. ..+..+ .|++|.+
T Consensus 396 kL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 396 KLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVM 446 (873)
T ss_pred heeecCceee-ecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhh
Confidence 5555555554 233344555556666666655555543 334444 5555544
No 6
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=280.10 Aligned_cols=388 Identities=20% Similarity=0.190 Sum_probs=290.2
Q ss_pred CceEEEcCcccCCC-----ccccccCcceEEEecCCCCCCCCCC--CCCCceEEEccCCChhhcccCCCCCCcccEEEcc
Q 044302 141 LRLLKIGNVQLPKG-----LEYLSNKLRLLVWHQYPLKSLPSNL--QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLS 213 (830)
Q Consensus 141 Lr~L~l~~~~l~~~-----~~~l~~~Lr~L~l~~~~l~~lp~~~--~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~ 213 (830)
-+.|++++++++.. ...+|..-+.|++++|.+..+...+ ++++|++++|.+|.++.+|.......+|+.|+|.
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLR 133 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeee
Confidence 34566666666532 3445667777888888877775543 7788888888888888888777777778888888
Q ss_pred CCCCCCC-CCCCCCCCceeEEeeeCCccccccc-ccccCCCCccEEecCCCCCCccCCcccc--cCcccEEeccCccccc
Q 044302 214 HSENLIK-TPNFIEVPNLEVLDLEGCTRLREIH-SSLVRHNKLILLNLKGCTSLTTLPGEIF--MKSLKTLVLSGCLKLR 289 (830)
Q Consensus 214 ~~~~~~~-~~~~~~l~~L~~L~L~~~~~l~~~~-~~l~~l~~L~~L~L~~c~~l~~lp~~~~--l~~L~~L~L~~~~~~~ 289 (830)
+|.+... ...+..++.|+.|||+.| .+..++ .++..-.++++|+|++ +.++.+....+ +.+|.+|.|++|.+..
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN-~is~i~~~sfp~~~ni~~L~La~-N~It~l~~~~F~~lnsL~tlkLsrNritt 211 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRN-LISEIPKPSFPAKVNIKKLNLAS-NRITTLETGHFDSLNSLLTLKLSRNRITT 211 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhc-hhhcccCCCCCCCCCceEEeecc-ccccccccccccccchheeeecccCcccc
Confidence 7764332 234777788888888874 444444 3455557788888887 67777766655 7788888888877777
Q ss_pred ccCCCCCccccceEeeccccccccc-ccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCc-ccC
Q 044302 290 KFPHVGGSMECLQELFLDETDIKEM-PLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQ-IVG 367 (830)
Q Consensus 290 ~~~~~~~~l~~L~~L~L~~~~i~~l-~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~-~~~ 367 (830)
..+..|.++++|+.|+|..|.|..+ -..|..+++|+.|.+..|.+...-...|..+.++++|+|..|.....-.. +.+
T Consensus 212 Lp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfg 291 (873)
T KOG4194|consen 212 LPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFG 291 (873)
T ss_pred cCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccc
Confidence 7777777788888888888888766 44778888888888888887777777788888888888888776554433 667
Q ss_pred CCCCcEEEecCCccccc-CcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEe
Q 044302 368 MEGLSELYLDGTSITEV-PSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELD 446 (830)
Q Consensus 368 l~~L~~L~L~~~~i~~l-~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~ 446 (830)
+.+|+.|+|+.|.|..+ ++++...++|+.|+|++|.+...-+..|..+..|++|+|+.|.....-...|..+.+|++|+
T Consensus 292 Lt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~Ld 371 (873)
T KOG4194|consen 292 LTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLD 371 (873)
T ss_pred cchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhc
Confidence 88888888888888866 45577888899999998888887788888888999999998887776667788889999999
Q ss_pred cCCCccc----CCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEE
Q 044302 447 ISGTATR----RPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKAL 522 (830)
Q Consensus 447 L~~n~i~----~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L 522 (830)
|+.|.+. .-...+..+++|+.|.+.||++... .-.+|.+++.|++|+|.+|.|. ...+..|..+ .|+.|
T Consensus 372 Lr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I-----~krAfsgl~~LE~LdL~~Naia-SIq~nAFe~m-~Lk~L 444 (873)
T KOG4194|consen 372 LRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSI-----PKRAFSGLEALEHLDLGDNAIA-SIQPNAFEPM-ELKEL 444 (873)
T ss_pred CcCCeEEEEEecchhhhccchhhhheeecCceeeec-----chhhhccCcccceecCCCCcce-eecccccccc-hhhhh
Confidence 9998876 2223455689999999999885532 2233889999999999999987 5677888888 89888
Q ss_pred eCCC------CCCcccCcccC
Q 044302 523 YLSE------NNFVTLPASIS 537 (830)
Q Consensus 523 ~L~~------n~l~~lp~~l~ 537 (830)
.+.. |++..++.++.
T Consensus 445 v~nSssflCDCql~Wl~qWl~ 465 (873)
T KOG4194|consen 445 VMNSSSFLCDCQLKWLAQWLY 465 (873)
T ss_pred hhcccceEEeccHHHHHHHHH
Confidence 7764 55666665553
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.96 E-value=2.7e-33 Score=281.94 Aligned_cols=399 Identities=26% Similarity=0.313 Sum_probs=235.8
Q ss_pred CCceEEEcCccc---CCCccccccCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcccEEEccCC
Q 044302 140 NLRLLKIGNVQL---PKGLEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHS 215 (830)
Q Consensus 140 ~Lr~L~l~~~~l---~~~~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~ 215 (830)
.|+.|.+++|.+ ..++..++ .|.+|.++.|.+..+|+.+ .+..++.|+.++|++.++|..+..+..|+.++.++|
T Consensus 46 ~l~~lils~N~l~~l~~dl~nL~-~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n 124 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLREDLKNLA-CLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSN 124 (565)
T ss_pred chhhhhhccCchhhccHhhhccc-ceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhcccc
Confidence 344555555543 23444443 5666666666666666555 555666666666666666666666666666666666
Q ss_pred CCCCCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccc-cCcccEEeccCcccccccCCC
Q 044302 216 ENLIKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIF-MKSLKTLVLSGCLKLRKFPHV 294 (830)
Q Consensus 216 ~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~ 294 (830)
.....+++++.+..|+.|+..+ +.+..+|.+++++.+|..|++.+ +.++.+|.... ++.|++|+...| ..+.+|..
T Consensus 125 ~~~el~~~i~~~~~l~dl~~~~-N~i~slp~~~~~~~~l~~l~~~~-n~l~~l~~~~i~m~~L~~ld~~~N-~L~tlP~~ 201 (565)
T KOG0472|consen 125 ELKELPDSIGRLLDLEDLDATN-NQISSLPEDMVNLSKLSKLDLEG-NKLKALPENHIAMKRLKHLDCNSN-LLETLPPE 201 (565)
T ss_pred ceeecCchHHHHhhhhhhhccc-cccccCchHHHHHHHHHHhhccc-cchhhCCHHHHHHHHHHhcccchh-hhhcCChh
Confidence 5555555566666666666555 34455556666666666666665 44444444333 556666655542 34455555
Q ss_pred CCccccceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEE
Q 044302 295 GGSMECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSEL 374 (830)
Q Consensus 295 ~~~l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L 374 (830)
++.+.+|..|++..|++..+| .|.++..|.++.+..|.+..........+++|..|++.+|+.......++.+.+|+.|
T Consensus 202 lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rL 280 (565)
T KOG0472|consen 202 LGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERL 280 (565)
T ss_pred hcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHHHhhhhhhh
Confidence 555666666666666655555 4555555555555544332222222335555555555555433333334455555555
Q ss_pred EecCCcccccCcccCCCCCccEEecCCccCccc---------------c----------------------c-cc---cc
Q 044302 375 YLDGTSITEVPSSIELLPGIELLNLNDCKNLVR---------------L----------------------P-RS---IN 413 (830)
Q Consensus 375 ~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~---------------l----------------------~-~~---~~ 413 (830)
++++|.|+.+|.+++++ .|+.|.+.+|+..+. + + .. ..
T Consensus 281 DlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~ 359 (565)
T KOG0472|consen 281 DLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIY 359 (565)
T ss_pred cccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchh
Confidence 55555555555555555 555555555543210 0 0 00 00
Q ss_pred CCCCCC--------------------------EEeccCCC-----------------------CCCccCcccCCCCCccE
Q 044302 414 GLKALK--------------------------TLSLSGCC-----------------------KLENVPDTLGQVESLEE 444 (830)
Q Consensus 414 ~l~~L~--------------------------~L~L~~~~-----------------------~l~~~~~~l~~l~~L~~ 444 (830)
.+.+.+ ..+++.|+ ....+|..+..+++|..
T Consensus 360 ~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~ 439 (565)
T KOG0472|consen 360 AIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTF 439 (565)
T ss_pred hhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhccee
Confidence 111222 33333332 23334556677888888
Q ss_pred EecCCCcccCCCcccccCCCCcEEEcCCCCCCCCCCccccCCC-CCCCCccCeecCCCCCCCCCccccccCCCCCCCEEe
Q 044302 445 LDISGTATRRPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPS-LSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALY 523 (830)
Q Consensus 445 L~L~~n~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~-l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~ 523 (830)
|++++|.+..+|..++.+..|+.|+++.|+.. .+|. +-.+..|+.+-.++|++. ..-+..+.++.+|..|+
T Consensus 440 L~L~NN~Ln~LP~e~~~lv~Lq~LnlS~NrFr-------~lP~~~y~lq~lEtllas~nqi~-~vd~~~l~nm~nL~tLD 511 (565)
T KOG0472|consen 440 LDLSNNLLNDLPEEMGSLVRLQTLNLSFNRFR-------MLPECLYELQTLETLLASNNQIG-SVDPSGLKNMRNLTTLD 511 (565)
T ss_pred eecccchhhhcchhhhhhhhhheecccccccc-------cchHHHhhHHHHHHHHhcccccc-ccChHHhhhhhhcceec
Confidence 88888888888888888888888888888643 2333 233445667777778886 34445588899999999
Q ss_pred CCCCCCcccCcccCCCCccCEeecccccc
Q 044302 524 LSENNFVTLPASISGLFNLEYLKLEDCKR 552 (830)
Q Consensus 524 L~~n~l~~lp~~l~~L~~L~~L~L~~c~~ 552 (830)
|.+|.+..+|+.++++++|++|+|++||.
T Consensus 512 L~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 512 LQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred cCCCchhhCChhhccccceeEEEecCCcc
Confidence 99999999999999999999999999874
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=4.6e-31 Score=278.31 Aligned_cols=362 Identities=23% Similarity=0.321 Sum_probs=264.9
Q ss_pred CCCceEEEcCcccC-----CCccccccCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcccEEEc
Q 044302 139 TNLRLLKIGNVQLP-----KGLEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKL 212 (830)
Q Consensus 139 ~~Lr~L~l~~~~l~-----~~~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L 212 (830)
+-.|-.++++|.++ ....... .+++|.|....+..+|..+ .+.+|++|.+.+|++.++...+..|+.||.+.+
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt-~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMT-QMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIV 85 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhh-heeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhh
Confidence 44455566666654 3444444 7888888888888888877 788888888888888888888888888888888
Q ss_pred cCCCCC--CCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccc
Q 044302 213 SHSENL--IKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRK 290 (830)
Q Consensus 213 ~~~~~~--~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~ 290 (830)
.+|+.. ..++++-.+..|..|+|++ +.+.++|..+...+++-.|+|++ +++.++|..++
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLSh-NqL~EvP~~LE~AKn~iVLNLS~-N~IetIPn~lf----------------- 146 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSH-NQLREVPTNLEYAKNSIVLNLSY-NNIETIPNSLF----------------- 146 (1255)
T ss_pred hccccccCCCCchhcccccceeeecch-hhhhhcchhhhhhcCcEEEEccc-CccccCCchHH-----------------
Confidence 887632 2345677788888888887 46777788887778888888877 66777775443
Q ss_pred cCCCCCccccceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCC
Q 044302 291 FPHVGGSMECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEG 370 (830)
Q Consensus 291 ~~~~~~~l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~ 370 (830)
.+++.|-.|+|++|.+..+|+.+..+..|++|.|++|+....-...+.++ .+
T Consensus 147 -----inLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsm-----------------------ts 198 (1255)
T KOG0444|consen 147 -----INLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSM-----------------------TS 198 (1255)
T ss_pred -----HhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccc-----------------------hh
Confidence 34444555566666666777777777777777776665432222222233 34
Q ss_pred CcEEEecCCccc--ccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecC
Q 044302 371 LSELYLDGTSIT--EVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDIS 448 (830)
Q Consensus 371 L~~L~L~~~~i~--~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~ 448 (830)
|+.|++++++-+ .+|.++..+.+|..++++.| .+..+|..+-.+++|+.|+|++|.+.+ +....+...+|++|+++
T Consensus 199 L~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N-~Lp~vPecly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlS 276 (1255)
T KOG0444|consen 199 LSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSEN-NLPIVPECLYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLS 276 (1255)
T ss_pred hhhhhcccccchhhcCCCchhhhhhhhhcccccc-CCCcchHHHhhhhhhheeccCcCceee-eeccHHHHhhhhhhccc
Confidence 445555554433 56666666777777777654 345566667777777777777765543 23334556788999999
Q ss_pred CCcccCCCcccccCCCCcEEEcCCCCCCCCCCccccCCC-CCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCC
Q 044302 449 GTATRRPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPS-LSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSEN 527 (830)
Q Consensus 449 ~n~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~-l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n 527 (830)
.|.++.+|..+..+++|+.|.+.+|+..-. .+|+ ++.|..|+.+...+|.+ +..|+.+..++.|+.|.|+.|
T Consensus 277 rNQLt~LP~avcKL~kL~kLy~n~NkL~Fe-----GiPSGIGKL~~Levf~aanN~L--ElVPEglcRC~kL~kL~L~~N 349 (1255)
T KOG0444|consen 277 RNQLTVLPDAVCKLTKLTKLYANNNKLTFE-----GIPSGIGKLIQLEVFHAANNKL--ELVPEGLCRCVKLQKLKLDHN 349 (1255)
T ss_pred cchhccchHHHhhhHHHHHHHhccCccccc-----CCccchhhhhhhHHHHhhcccc--ccCchhhhhhHHHHHhccccc
Confidence 999999999999999999999998886533 3444 88899999999999998 568999999999999999999
Q ss_pred CCcccCcccCCCCccCEeeccccccccccC
Q 044302 528 NFVTLPASISGLFNLEYLKLEDCKRLQSLP 557 (830)
Q Consensus 528 ~l~~lp~~l~~L~~L~~L~L~~c~~l~~lp 557 (830)
.+.++|..|.-|+.|+.|+++.||+|.--|
T Consensus 350 rLiTLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 350 RLITLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred ceeechhhhhhcCCcceeeccCCcCccCCC
Confidence 999999999999999999999999987654
No 9
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.95 E-value=4.2e-31 Score=266.17 Aligned_cols=389 Identities=24% Similarity=0.296 Sum_probs=307.5
Q ss_pred hHhhhCCCCCceEEEcCcccC---CCccccccCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcc
Q 044302 132 AKAFSLMTNLRLLKIGNVQLP---KGLEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTL 207 (830)
Q Consensus 132 ~~~f~~l~~Lr~L~l~~~~l~---~~~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L 207 (830)
+.+...+..++.|+.+.|.+. ..+..++ +|+.|+.+.|.++.+|+.+ .+..|..|+..+|+|.++|.++..+.+|
T Consensus 84 p~aig~l~~l~~l~vs~n~ls~lp~~i~s~~-~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l 162 (565)
T KOG0472|consen 84 PAAIGELEALKSLNVSHNKLSELPEQIGSLI-SLVKLDCSSNELKELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKL 162 (565)
T ss_pred CHHHHHHHHHHHhhcccchHhhccHHHhhhh-hhhhhhccccceeecCchHHHHhhhhhhhccccccccCchHHHHHHHH
Confidence 457777788888888887754 4444554 7888999999999998887 8889999999999999999999999999
Q ss_pred cEEEccCCCCCCCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCccc
Q 044302 208 KVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLK 287 (830)
Q Consensus 208 ~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~ 287 (830)
..+++.+|+....+|+..+++.|++|+... +.++.+|..++.+.+|..|++.. +.+..+|..-.+..|++|+++.|.+
T Consensus 163 ~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~-N~L~tlP~~lg~l~~L~~LyL~~-Nki~~lPef~gcs~L~Elh~g~N~i 240 (565)
T KOG0472|consen 163 SKLDLEGNKLKALPENHIAMKRLKHLDCNS-NLLETLPPELGGLESLELLYLRR-NKIRFLPEFPGCSLLKELHVGENQI 240 (565)
T ss_pred HHhhccccchhhCCHHHHHHHHHHhcccch-hhhhcCChhhcchhhhHHHHhhh-cccccCCCCCccHHHHHHHhcccHH
Confidence 999999998777777777799999999887 57889999999999999999999 7888899544488999999988765
Q ss_pred ccccCCCCCccccceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCC-------
Q 044302 288 LRKFPHVGGSMECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLK------- 360 (830)
Q Consensus 288 ~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~------- 360 (830)
.....+....+++|..|++..|+++++|..+..+++|++|++++|. ...+|.+++++ .|+.|.+.||+.-+
T Consensus 241 ~~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~-is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~ 318 (565)
T KOG0472|consen 241 EMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNND-ISSLPYSLGNL-HLKFLALEGNPLRTIRREIIS 318 (565)
T ss_pred HhhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCc-cccCCcccccc-eeeehhhcCCchHHHHHHHHc
Confidence 4444444558899999999999999999999999999999999876 45677788888 89999888876210
Q ss_pred -----------------------------------cCCcccCCCCCcEEEecCCcccccCcccCCCCC---ccEEecCCc
Q 044302 361 -----------------------------------KFPQIVGMEGLSELYLDGTSITEVPSSIELLPG---IELLNLNDC 402 (830)
Q Consensus 361 -----------------------------------~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~---L~~L~L~~~ 402 (830)
.+|+...+.+.+.|++++-+++.+|..+..-.. ....+++.|
T Consensus 319 ~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskN 398 (565)
T KOG0472|consen 319 KGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKN 398 (565)
T ss_pred ccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccc
Confidence 011112244566666666666666654322111 344444443
Q ss_pred -----------------------cCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCcccCCCccc
Q 044302 403 -----------------------KNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATRRPPCSI 459 (830)
Q Consensus 403 -----------------------~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~~~l 459 (830)
.....+|..+..+++|..|++++| .+..+|..++.+..|+.|+++.|.+..+|..+
T Consensus 399 qL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN-~Ln~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~ 477 (565)
T KOG0472|consen 399 QLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNN-LLNDLPEEMGSLVRLQTLNLSFNRFRMLPECL 477 (565)
T ss_pred hHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccc-hhhhcchhhhhhhhhheecccccccccchHHH
Confidence 334445667788999999999985 67789999999999999999999999999988
Q ss_pred ccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCCCCcccCc
Q 044302 460 FHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFVTLPA 534 (830)
Q Consensus 460 ~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~ 534 (830)
..+..|+.+-.++|+.... ....+.++.+|.+||+.+|.+. .+|..++++++|++|.++||.|. .|.
T Consensus 478 y~lq~lEtllas~nqi~~v-----d~~~l~nm~nL~tLDL~nNdlq--~IPp~LgnmtnL~hLeL~gNpfr-~Pr 544 (565)
T KOG0472|consen 478 YELQTLETLLASNNQIGSV-----DPSGLKNMRNLTTLDLQNNDLQ--QIPPILGNMTNLRHLELDGNPFR-QPR 544 (565)
T ss_pred hhHHHHHHHHhcccccccc-----ChHHhhhhhhcceeccCCCchh--hCChhhccccceeEEEecCCccC-CCH
Confidence 8888888888888875543 2223889999999999999995 49999999999999999999998 553
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=3.4e-29 Score=264.21 Aligned_cols=359 Identities=25% Similarity=0.278 Sum_probs=284.8
Q ss_pred cEEEEEeeccCCCccccccChHhhhCCCCCceEEEcCccc---CCCccccccCcceEEEecCCCCCCCCCC-CCCCceEE
Q 044302 112 VVEGMIIDDHFFPENEMHLSAKAFSLMTNLRLLKIGNVQL---PKGLEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEF 187 (830)
Q Consensus 112 ~v~~i~l~~~~~~~~~~~~~~~~f~~l~~Lr~L~l~~~~l---~~~~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L 187 (830)
.|+++.+... ..+ ...+ +.....|+.++-|.+...++ |+.+..+ .+|.+|.+.+|++.++--.+ .++.|+.+
T Consensus 8 FVrGvDfsgN-DFs-g~~F-P~~v~qMt~~~WLkLnrt~L~~vPeEL~~l-qkLEHLs~~HN~L~~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 8 FVRGVDFSGN-DFS-GDRF-PHDVEQMTQMTWLKLNRTKLEQVPEELSRL-QKLEHLSMAHNQLISVHGELSDLPRLRSV 83 (1255)
T ss_pred eeecccccCC-cCC-CCcC-chhHHHhhheeEEEechhhhhhChHHHHHH-hhhhhhhhhhhhhHhhhhhhccchhhHHH
Confidence 4666655544 221 2223 35567788888888877654 3444444 47888888888887776655 78888888
Q ss_pred EccCCChhh--cccCCCCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCccccccccc-ccCCCCccEEecCCCCC
Q 044302 188 EMCYSRIEE--LWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRLREIHSS-LVRHNKLILLNLKGCTS 264 (830)
Q Consensus 188 ~L~~n~i~~--l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~-l~~l~~L~~L~L~~c~~ 264 (830)
++++|+++. +|..+..+.-|.+|||++|+....+..+...+++-.|+|++| .+..+|.. +.+++.|-.|+|++ +.
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N-~IetIPn~lfinLtDLLfLDLS~-Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYN-NIETIPNSLFINLTDLLFLDLSN-NR 161 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccC-ccccCCchHHHhhHhHhhhcccc-ch
Confidence 888888774 777888888888888888875444556778888888888874 56666655 56788888888888 77
Q ss_pred CccCCcccc-cCcccEEeccCcccccccCCCCCccccceEeeccccccc--ccccchhcccCCcEEeccCCCCCCCCccc
Q 044302 265 LTTLPGEIF-MKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETDIK--EMPLSIEHLSGLILLTLKYCKNLSSLPVT 341 (830)
Q Consensus 265 l~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~i~--~l~~~l~~l~~L~~L~L~~~~~~~~~~~~ 341 (830)
+..+|+.+. +..|++|.|++|+.....-..+..|++|+.|.+++++-+ .+|.++..+.+|..++++.|. +..+|..
T Consensus 162 Le~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~-Lp~vPec 240 (1255)
T KOG0444|consen 162 LEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN-LPIVPEC 240 (1255)
T ss_pred hhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC-CCcchHH
Confidence 888888777 888888888888776554455567788888888888755 788888889999999988764 5677888
Q ss_pred cccCccCcEEeecCCCCCCcCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEecCCccCc-ccccccccCCCCCCE
Q 044302 342 ISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNL-VRLPRSINGLKALKT 420 (830)
Q Consensus 342 l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l-~~l~~~~~~l~~L~~ 420 (830)
+..+++|+.|+|++|.+.+.-.......+|++|+++.|+++.+|..+..+++|+.|.+.+|+.. ..+|+.++.+.+|+.
T Consensus 241 ly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Lev 320 (1255)
T KOG0444|consen 241 LYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEV 320 (1255)
T ss_pred HhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHH
Confidence 8899999999999988776555566678899999999999999999999999999999988865 468999999999999
Q ss_pred EeccCCCCCCccCcccCCCCCccEEecCCCcccCCCcccccCCCCcEEEcCCCCCCCC
Q 044302 421 LSLSGCCKLENVPDTLGQVESLEELDISGTATRRPPCSIFHMKNLKTLSFSGCNGPPS 478 (830)
Q Consensus 421 L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~~~l~~l~~L~~L~L~~~~~~~~ 478 (830)
+...+ +.++.+|+.+..+..|+.|.|+.|.+..+|..+.-++.|+.|++..|+.+..
T Consensus 321 f~aan-N~LElVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVM 377 (1255)
T KOG0444|consen 321 FHAAN-NKLELVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVM 377 (1255)
T ss_pred HHhhc-cccccCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccC
Confidence 99887 4678899999999999999999999999999999999999999999987653
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=2.2e-24 Score=267.42 Aligned_cols=344 Identities=29% Similarity=0.408 Sum_probs=222.7
Q ss_pred CCCCCcccEEEccCCCC------CC-CCCCCCCCC-ceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCccc
Q 044302 201 IKPLNTLKVMKLSHSEN------LI-KTPNFIEVP-NLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEI 272 (830)
Q Consensus 201 ~~~l~~L~~L~L~~~~~------~~-~~~~~~~l~-~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~ 272 (830)
+..+++|+.|.+..+.. .. .+..+..+| +|+.|.+.++ .+..+|..+ ...+|+.|++.+ +.+..++..+
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~-~l~~lP~~f-~~~~L~~L~L~~-s~l~~L~~~~ 630 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKY-PLRCMPSNF-RPENLVKLQMQG-SKLEKLWDGV 630 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCC-CCCCCCCcC-CccCCcEEECcC-cccccccccc
Confidence 45555666665544321 01 112333332 4666666553 345555554 345666666665 3455555544
Q ss_pred c-cCcccEEeccCcccccccCCCCCccccceEeecccc-cccccccchhcccCCcEEeccCCCCCCCCccccccCccCcE
Q 044302 273 F-MKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDET-DIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRT 350 (830)
Q Consensus 273 ~-l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~-~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~ 350 (830)
. +++|+.|+|+++.....+|. ++.+++|+.|+++++ .+..+|..+..+++|+.|++++|..+..+|..+ ++++|+.
T Consensus 631 ~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 631 HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred ccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCE
Confidence 4 66666666666555555543 455666666666654 345677777788888888888888888887765 7888999
Q ss_pred EeecCCCCCCcCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCC
Q 044302 351 LKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLE 430 (830)
Q Consensus 351 L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~ 430 (830)
|++++|..+..+|.. ..+|+.|++++|.+..+|..+ .+++|+.|.+.++..... ...+..++
T Consensus 709 L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~l-~~~~~~l~-------------- 770 (1153)
T PLN03210 709 LNLSGCSRLKSFPDI--STNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKL-WERVQPLT-------------- 770 (1153)
T ss_pred EeCCCCCCccccccc--cCCcCeeecCCCccccccccc-cccccccccccccchhhc-cccccccc--------------
Confidence 999998887777754 468889999999988888765 577888888776543211 11111000
Q ss_pred ccCcccCCCCCccEEecCCCc-ccCCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCcc
Q 044302 431 NVPDTLGQVESLEELDISGTA-TRRPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAI 509 (830)
Q Consensus 431 ~~~~~l~~l~~L~~L~L~~n~-i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~ 509 (830)
+......++|+.|++++|. +..+|..++++++|+.|++++|..... +|...++++|+.|++++|... ..+
T Consensus 771 --~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~------LP~~~~L~sL~~L~Ls~c~~L-~~~ 841 (1153)
T PLN03210 771 --PLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLET------LPTGINLESLESLDLSGCSRL-RTF 841 (1153)
T ss_pred --hhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCe------eCCCCCccccCEEECCCCCcc-ccc
Confidence 0111123456666666553 335666666666666666666654432 333335677777777777543 223
Q ss_pred ccccCCCCCCCEEeCCCCCCcccCcccCCCCccCEeeccccccccccCCCC---CCcceeeccCCcccccccc
Q 044302 510 LSDIGNLHSLKALYLSENNFVTLPASISGLFNLEYLKLEDCKRLQSLPQLP---PNVHNVRLNGCASLVTLLG 579 (830)
Q Consensus 510 ~~~l~~l~~L~~L~L~~n~l~~lp~~l~~L~~L~~L~L~~c~~l~~lp~lp---~sL~~L~i~~C~~L~~~~~ 579 (830)
|. ..++|+.|+|++|.+..+|.++..+++|+.|+|++|+.++.+|..+ ++|+.+++.+|++|+.++.
T Consensus 842 p~---~~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~L~~~~l 911 (1153)
T PLN03210 842 PD---ISTNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGALTEASW 911 (1153)
T ss_pred cc---cccccCEeECCCCCCccChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCcccccccC
Confidence 32 2468999999999999999999999999999999999999998644 4677889999999987653
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.92 E-value=8.7e-28 Score=265.96 Aligned_cols=419 Identities=20% Similarity=0.196 Sum_probs=206.9
Q ss_pred hHhhhCCCCCceEEEcCcccCCC---ccccccCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcc
Q 044302 132 AKAFSLMTNLRLLKIGNVQLPKG---LEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTL 207 (830)
Q Consensus 132 ~~~f~~l~~Lr~L~l~~~~l~~~---~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L 207 (830)
.++..+.-+|+.|++++|++... +..+ .+|+.|.++.|.+..+|... .+.+|++|.|.+|.++.+|.++..+.+|
T Consensus 38 l~~~~~~v~L~~l~lsnn~~~~fp~~it~l-~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n~l~~lP~~~~~lknl 116 (1081)
T KOG0618|consen 38 LEFVEKRVKLKSLDLSNNQISSFPIQITLL-SHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNNRLQSLPASISELKNL 116 (1081)
T ss_pred hHHhhheeeeEEeeccccccccCCchhhhH-HHHhhcccchhhHhhCchhhhhhhcchhheeccchhhcCchhHHhhhcc
Confidence 45555666699999999987543 3444 48999999999999999776 8999999999999999999999999999
Q ss_pred cEEEccCCCCCCCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccc-cCcccEEeccCcc
Q 044302 208 KVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIF-MKSLKTLVLSGCL 286 (830)
Q Consensus 208 ~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~~~~ 286 (830)
++|+++.|.....+..+..+..++.+..++|..+..++... ++.+++..+.....++.++. +.. .|+|..|.
T Consensus 117 ~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~-----ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~ 189 (1081)
T KOG0618|consen 117 QYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTS-----IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNE 189 (1081)
T ss_pred cccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhcccc-----chhhhhhhhhcccchhcchhhhhe--eeecccch
Confidence 99999999866555556666666666666653222222111 33333333222222222222 111 23333332
Q ss_pred cccccCCCCCcc--------------------ccceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCc
Q 044302 287 KLRKFPHVGGSM--------------------ECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLK 346 (830)
Q Consensus 287 ~~~~~~~~~~~l--------------------~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~ 346 (830)
+.. .....+ ++|+.|+.+.|.+..+. .-....+|++++++.+.. ..+|.++..+.
T Consensus 190 ~~~---~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~-~~p~p~nl~~~dis~n~l-~~lp~wi~~~~ 264 (1081)
T KOG0618|consen 190 MEV---LDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLD-VHPVPLNLQYLDISHNNL-SNLPEWIGACA 264 (1081)
T ss_pred hhh---hhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeec-cccccccceeeecchhhh-hcchHHHHhcc
Confidence 220 001111 12222222222222100 001122444444444332 22334444555
Q ss_pred cCcEEeecCCCCCCcCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCC-CCEEeccC
Q 044302 347 CLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKA-LKTLSLSG 425 (830)
Q Consensus 347 ~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~-L~~L~L~~ 425 (830)
+|+.|.+.+|........+....+|+.|.+..|.+..+|.....+..|+.|+|..|......+..+..+.. |+.|+.+.
T Consensus 265 nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~ 344 (1081)
T KOG0618|consen 265 NLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSS 344 (1081)
T ss_pred cceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhh
Confidence 55555554444432222344444455555555555555544444555555555444332222211221211 33333333
Q ss_pred CCCCCccCcccCCCCCccEEecCCCccc-CCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCC
Q 044302 426 CCKLENVPDTLGQVESLEELDISGTATR-RPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGL 504 (830)
Q Consensus 426 ~~~l~~~~~~l~~l~~L~~L~L~~n~i~-~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l 504 (830)
+......-..-..+..|+.|++.+|.++ .....+.++++|+.|+|++|+.... ....+.+++.|++|+||+|.+
T Consensus 345 n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f-----pas~~~kle~LeeL~LSGNkL 419 (1081)
T KOG0618|consen 345 NKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF-----PASKLRKLEELEELNLSGNKL 419 (1081)
T ss_pred ccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC-----CHHHHhchHHhHHHhcccchh
Confidence 2221111111122344555555555544 2223344455555555555543210 111144555555555555555
Q ss_pred CCCccccccCCCCCCCEEeCCCCCCcccCcccCCCCccCEeeccccccccc--cCC-CC-CCcceeeccCCc
Q 044302 505 GEGAILSDIGNLHSLKALYLSENNFVTLPASISGLFNLEYLKLEDCKRLQS--LPQ-LP-PNVHNVRLNGCA 572 (830)
Q Consensus 505 ~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~l~~L~~L~~L~L~~c~~l~~--lp~-lp-~sL~~L~i~~C~ 572 (830)
.. +|..+..++.|+.|...+|++...| .+.+++.|+.+|++.|. |+. +|+ +| +.|++|+++|-+
T Consensus 420 ~~--Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~-L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 420 TT--LPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNN-LSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hh--hhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccch-hhhhhhhhhCCCcccceeeccCCc
Confidence 32 4455555555555555555555555 45555555555555442 221 121 44 455555555543
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-26 Score=255.94 Aligned_cols=413 Identities=22% Similarity=0.225 Sum_probs=307.7
Q ss_pred CceEEEcCcccCC----CccccccCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcccEEEccCC
Q 044302 141 LRLLKIGNVQLPK----GLEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHS 215 (830)
Q Consensus 141 Lr~L~l~~~~l~~----~~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~ 215 (830)
+..|++..|.+-. ....- -+|+.|++++|.+..+|..+ .+.+|+.|+++.|.|..+|....++.+|++++|.+|
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~-v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n 101 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKR-VKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNN 101 (1081)
T ss_pred HHhhhccccccccCchHHhhhe-eeeEEeeccccccccCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccc
Confidence 6666776665422 11111 24889999999999999888 788999999999999999988889999999999988
Q ss_pred CCCCCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccccCCCC
Q 044302 216 ENLIKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRKFPHVG 295 (830)
Q Consensus 216 ~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~~~~~~ 295 (830)
.....+..+..+.+|++|++++ +....+|..+..+..+..+..++|..+..++.. .++.+++..+.....++..+
T Consensus 102 ~l~~lP~~~~~lknl~~LdlS~-N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~----~ik~~~l~~n~l~~~~~~~i 176 (1081)
T KOG0618|consen 102 RLQSLPASISELKNLQYLDLSF-NHFGPIPLVIEVLTAEEELAASNNEKIQRLGQT----SIKKLDLRLNVLGGSFLIDI 176 (1081)
T ss_pred hhhcCchhHHhhhcccccccch-hccCCCchhHHhhhHHHHHhhhcchhhhhhccc----cchhhhhhhhhcccchhcch
Confidence 7555555788899999999998 466778888888888888888886444444432 27777777777777777777
Q ss_pred CccccceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEE
Q 044302 296 GSMECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELY 375 (830)
Q Consensus 296 ~~l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~ 375 (830)
..++. .|++..|.+. ...+..+.+|+.|....+..... .-.-++|+.|+..+|......+ -.-..+|+.++
T Consensus 177 ~~l~~--~ldLr~N~~~--~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~-~p~p~nl~~~d 247 (1081)
T KOG0618|consen 177 YNLTH--QLDLRYNEME--VLDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDV-HPVPLNLQYLD 247 (1081)
T ss_pred hhhhe--eeecccchhh--hhhhhhccchhhhhhhhcccceE----EecCcchheeeeccCcceeecc-ccccccceeee
Confidence 76666 6888888887 33456677777777766654332 2345788899999888773322 23356899999
Q ss_pred ecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCcccCC
Q 044302 376 LDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATRRP 455 (830)
Q Consensus 376 L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l 455 (830)
++.+.+..+|+++..+.+|+.+...+|.. ..+|..+....+|+.|.+..|. ++.+|...+.+.+|++|+|..|.+..+
T Consensus 248 is~n~l~~lp~wi~~~~nle~l~~n~N~l-~~lp~ri~~~~~L~~l~~~~ne-l~yip~~le~~~sL~tLdL~~N~L~~l 325 (1081)
T KOG0618|consen 248 ISHNNLSNLPEWIGACANLEALNANHNRL-VALPLRISRITSLVSLSAAYNE-LEYIPPFLEGLKSLRTLDLQSNNLPSL 325 (1081)
T ss_pred cchhhhhcchHHHHhcccceEecccchhH-HhhHHHHhhhhhHHHHHhhhhh-hhhCCCcccccceeeeeeehhcccccc
Confidence 99999999999999999999999998876 7777777788888888887754 556677777888899999988888877
Q ss_pred Cccccc--------------------------CCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCcc
Q 044302 456 PCSIFH--------------------------MKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAI 509 (830)
Q Consensus 456 ~~~l~~--------------------------l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~ 509 (830)
|..+.. ++.|+.|.+.+|..... .+|.+.++.+|+.|+|++|++.. ..
T Consensus 326 p~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~-----c~p~l~~~~hLKVLhLsyNrL~~-fp 399 (1081)
T KOG0618|consen 326 PDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDS-----CFPVLVNFKHLKVLHLSYNRLNS-FP 399 (1081)
T ss_pred chHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccccc-----chhhhccccceeeeeeccccccc-CC
Confidence 764322 23455556666554433 56678888888888888888852 22
Q ss_pred ccccCCCCCCCEEeCCCCCCcccCcccCCCCccCEeeccccccccccCCCC--CCcceeeccCCccccccc
Q 044302 510 LSDIGNLHSLKALYLSENNFVTLPASISGLFNLEYLKLEDCKRLQSLPQLP--PNVHNVRLNGCASLVTLL 578 (830)
Q Consensus 510 ~~~l~~l~~L~~L~L~~n~l~~lp~~l~~L~~L~~L~L~~c~~l~~lp~lp--~sL~~L~i~~C~~L~~~~ 578 (830)
...+.+++.|+.|+||||.++.+|..+..+..|++|...+| .+.++|++- +.|+.++++ |-.|..+.
T Consensus 400 as~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN-~l~~fPe~~~l~qL~~lDlS-~N~L~~~~ 468 (1081)
T KOG0618|consen 400 ASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSN-QLLSFPELAQLPQLKVLDLS-CNNLSEVT 468 (1081)
T ss_pred HHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCC-ceeechhhhhcCcceEEecc-cchhhhhh
Confidence 34477888888888899888888888888888888888776 567788743 678999884 65555443
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.78 E-value=1.8e-20 Score=189.73 Aligned_cols=282 Identities=21% Similarity=0.182 Sum_probs=205.8
Q ss_pred EcCcccCCCccccccCcceEEEecCCCCCCCCCC--CCCCceEEEccCCChhhc-ccCCCCCCcccEEEccCCCCCCCCC
Q 044302 146 IGNVQLPKGLEYLSNKLRLLVWHQYPLKSLPSNL--QLDKIVEFEMCYSRIEEL-WKGIKPLNTLKVMKLSHSENLIKTP 222 (830)
Q Consensus 146 l~~~~l~~~~~~l~~~Lr~L~l~~~~l~~lp~~~--~l~~L~~L~L~~n~i~~l-~~~~~~l~~L~~L~L~~~~~~~~~~ 222 (830)
.++-.+...+..+|..-..+.|..|.|+.||+.. .+++|+.|||++|.|+.+ |..|+.++.|..|-+.+++.++.+|
T Consensus 53 Cr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~ 132 (498)
T KOG4237|consen 53 CRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLP 132 (498)
T ss_pred ccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhh
Confidence 3444566677788889999999999999999875 899999999999999998 7789999999888888855566655
Q ss_pred --CCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccc--cCcccEEeccCccc-----------
Q 044302 223 --NFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIF--MKSLKTLVLSGCLK----------- 287 (830)
Q Consensus 223 --~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~--l~~L~~L~L~~~~~----------- 287 (830)
.|.++..|+.|.+.-|.........+..+++|..|.+.+ +.++.++...+ +..++++.+..|..
T Consensus 133 k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyD-n~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~ 211 (498)
T KOG4237|consen 133 KGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYD-NKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLAD 211 (498)
T ss_pred hhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccc-hhhhhhccccccchhccchHhhhcCccccccccchhhh
Confidence 499999999999988766666667889999999999999 78888888655 88999998887762
Q ss_pred -ccccCCCCCccccceEeecccccccccccch--hcccCCcEEeccCCCCCCCCc-cccccCccCcEEeecCCCCCCcCC
Q 044302 288 -LRKFPHVGGSMECLQELFLDETDIKEMPLSI--EHLSGLILLTLKYCKNLSSLP-VTISSLKCLRTLKLSGCSKLKKFP 363 (830)
Q Consensus 288 -~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~l--~~l~~L~~L~L~~~~~~~~~~-~~l~~l~~L~~L~L~~~~~~~~~~ 363 (830)
....|..++......-..+.+.++..++..- ..+..+..--.+.|......| ..|..+++|+.|++++|.....-+
T Consensus 212 ~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~ 291 (498)
T KOG4237|consen 212 DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIED 291 (498)
T ss_pred HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhh
Confidence 2223334444444444445555555444311 111222222222332222223 357888888888888887766554
Q ss_pred c-ccCCCCCcEEEecCCcccccCcc-cCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCC
Q 044302 364 Q-IVGMEGLSELYLDGTSITEVPSS-IELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCK 428 (830)
Q Consensus 364 ~-~~~l~~L~~L~L~~~~i~~l~~~-~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~ 428 (830)
. +.+...+++|.|..|++..+... +..+..|+.|+|.+|++....|..|..+.+|.+|++-.|+.
T Consensus 292 ~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 292 GAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred hhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 4 66788888888888888877554 67888888888888888888888888888888888876654
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.74 E-value=2.3e-17 Score=190.21 Aligned_cols=256 Identities=20% Similarity=0.221 Sum_probs=124.5
Q ss_pred CceEEEcCcccCCCccccccCcceEEEecCCCCCCCCCCCCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCC
Q 044302 141 LRLLKIGNVQLPKGLEYLSNKLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIK 220 (830)
Q Consensus 141 Lr~L~l~~~~l~~~~~~l~~~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~ 220 (830)
-..|+++++.+..-+..++.+|+.|.+.+|.++.+|. .+++|++|++++|+|+.+|.. .++|+.|++++|.. ..
T Consensus 203 ~~~LdLs~~~LtsLP~~l~~~L~~L~L~~N~Lt~LP~--lp~~Lk~LdLs~N~LtsLP~l---p~sL~~L~Ls~N~L-~~ 276 (788)
T PRK15387 203 NAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPA--LPPELRTLEVSGNQLTSLPVL---PPGLLELSIFSNPL-TH 276 (788)
T ss_pred CcEEEcCCCCCCcCCcchhcCCCEEEccCCcCCCCCC--CCCCCcEEEecCCccCcccCc---ccccceeeccCCch-hh
Confidence 4456666666554444445566666666666666664 245666666666666666532 24556666666542 22
Q ss_pred CCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccccCCCCCcccc
Q 044302 221 TPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRKFPHVGGSMEC 300 (830)
Q Consensus 221 ~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~~~~~~~~l~~ 300 (830)
+|. ..++|+.|++++| .+..+|.. .++|+.|++++ +.+..+|. ...+|+.|++++|.+. .+|.. ..+
T Consensus 277 Lp~--lp~~L~~L~Ls~N-~Lt~LP~~---p~~L~~LdLS~-N~L~~Lp~--lp~~L~~L~Ls~N~L~-~LP~l---p~~ 343 (788)
T PRK15387 277 LPA--LPSGLCKLWIFGN-QLTSLPVL---PPGLQELSVSD-NQLASLPA--LPSELCKLWAYNNQLT-SLPTL---PSG 343 (788)
T ss_pred hhh--chhhcCEEECcCC-cccccccc---ccccceeECCC-CccccCCC--CcccccccccccCccc-ccccc---ccc
Confidence 222 1244555555553 33444432 24455555555 34444443 1234445555554332 22221 124
Q ss_pred ceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEEecCCc
Q 044302 301 LQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTS 380 (830)
Q Consensus 301 L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~ 380 (830)
|+.|++++|.++.+|.. ..+|+.|++++|... .+|.. ..+|+.|++++|.
T Consensus 344 Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~-------------------------~LP~l--~~~L~~LdLs~N~ 393 (788)
T PRK15387 344 LQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-------------------------SLPAL--PSGLKELIVSGNR 393 (788)
T ss_pred cceEecCCCccCCCCCC---Ccccceehhhccccc-------------------------cCccc--ccccceEEecCCc
Confidence 55555555555554432 123344444443322 22321 1345555555555
Q ss_pred ccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCccc
Q 044302 381 ITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATR 453 (830)
Q Consensus 381 i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~ 453 (830)
++.+|.. .++|+.|++++|... .+|.. ..+|+.|++++|.+. .+|..+..+++|+.|+|++|.+.
T Consensus 394 Lt~LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 394 LTSLPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred ccCCCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCC
Confidence 5554432 234555555555433 23332 234555555555433 45555556666666666666655
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.72 E-value=9.5e-17 Score=185.17 Aligned_cols=256 Identities=21% Similarity=0.257 Sum_probs=146.5
Q ss_pred cCcceEEEecCCCCCCCCCCCCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCc
Q 044302 160 NKLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCT 239 (830)
Q Consensus 160 ~~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~ 239 (830)
+.-..|+++++.++.+|..+. .+|+.|++.+|+++.+|.. .++|++|+|++|+. ..+|.+ .++|+.|++++|
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~-~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~L-tsLP~l--p~sL~~L~Ls~N- 272 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLP-AHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQL-TSLPVL--PPGLLELSIFSN- 272 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchh-cCCCEEEccCCcCCCCCCC---CCCCcEEEecCCcc-CcccCc--ccccceeeccCC-
Confidence 456788999999999998763 4799999999999998853 47888888888853 344432 467788888775
Q ss_pred ccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccccCCCCCccccceEeecccccccccccchh
Q 044302 240 RLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETDIKEMPLSIE 319 (830)
Q Consensus 240 ~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~l~ 319 (830)
.+..+|... .+|+.|++++ +.++.+|. .+++|+.|++++|.+.. +|... .+|+.|.+++|.++.+|..
T Consensus 273 ~L~~Lp~lp---~~L~~L~Ls~-N~Lt~LP~--~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~LP~l-- 340 (788)
T PRK15387 273 PLTHLPALP---SGLCKLWIFG-NQLTSLPV--LPPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTSLPTL-- 340 (788)
T ss_pred chhhhhhch---hhcCEEECcC-Cccccccc--cccccceeECCCCcccc-CCCCc---ccccccccccCcccccccc--
Confidence 345555422 4566677776 45555554 23455555555553332 22211 2334444444444443320
Q ss_pred cccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEec
Q 044302 320 HLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNL 399 (830)
Q Consensus 320 ~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L 399 (830)
..+|+.|++++|... .+|.+ .++|+.|++++|.+..+|.. .++|+.|++
T Consensus 341 -------------------------p~~Lq~LdLS~N~Ls-~LP~l--p~~L~~L~Ls~N~L~~LP~l---~~~L~~LdL 389 (788)
T PRK15387 341 -------------------------PSGLQELSVSDNQLA-SLPTL--PSELYKLWAYNNRLTSLPAL---PSGLKELIV 389 (788)
T ss_pred -------------------------ccccceEecCCCccC-CCCCC--CcccceehhhccccccCccc---ccccceEEe
Confidence 124555555554333 23332 24566677777777766643 245666677
Q ss_pred CCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCcccCCCcccccCCCCcEEEcCCCC
Q 044302 400 NDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATRRPPCSIFHMKNLKTLSFSGCN 474 (830)
Q Consensus 400 ~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~~~l~~l~~L~~L~L~~~~ 474 (830)
++|.+. .+|.. .++|+.|++++|... .+|.. ..+|+.|++++|.++.+|..+..+++|+.|+|++|+
T Consensus 390 s~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 390 SGNRLT-SLPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNP 456 (788)
T ss_pred cCCccc-CCCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCcccccChHHhhccCCCeEECCCCC
Confidence 666543 23332 245566666665433 24432 234555556666555555555555555555555554
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.68 E-value=1.3e-16 Score=185.50 Aligned_cols=96 Identities=22% Similarity=0.310 Sum_probs=46.3
Q ss_pred CcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCC
Q 044302 371 LSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGT 450 (830)
Q Consensus 371 L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n 450 (830)
|+.|++++|.++.+|..+ .++|+.|++++|.+. .+|..+ .++|+.|+|++|... .+|..+. .+|+.|++++|
T Consensus 327 L~~L~Ls~N~Lt~LP~~l--~~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N 398 (754)
T PRK15370 327 LKTLEAGENALTSLPASL--PPELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP--AALQIMQASRN 398 (754)
T ss_pred ceeccccCCccccCChhh--cCcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccC
Confidence 334444444444444332 134555555554332 233322 235555555555433 3343332 35666777777
Q ss_pred cccCCCccccc----CCCCcEEEcCCCC
Q 044302 451 ATRRPPCSIFH----MKNLKTLSFSGCN 474 (830)
Q Consensus 451 ~i~~l~~~l~~----l~~L~~L~L~~~~ 474 (830)
.+..+|..+.. ++++..|++.+|+
T Consensus 399 ~L~~LP~sl~~~~~~~~~l~~L~L~~Np 426 (754)
T PRK15370 399 NLVRLPESLPHFRGEGPQPTRIIVEYNP 426 (754)
T ss_pred CcccCchhHHHHhhcCCCccEEEeeCCC
Confidence 77666654432 3555566666555
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.68 E-value=8.7e-17 Score=186.83 Aligned_cols=246 Identities=19% Similarity=0.248 Sum_probs=141.2
Q ss_pred CCCceEEEcCcccCCCccccccCcceEEEecCCCCCCCCCCCCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCC
Q 044302 139 TNLRLLKIGNVQLPKGLEYLSNKLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENL 218 (830)
Q Consensus 139 ~~Lr~L~l~~~~l~~~~~~l~~~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~ 218 (830)
.+...|+++++.+......+|..|+.|++++|.++.+|..+. .+|++|++++|+++.+|..+. .+|+.|+|++|...
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip~~L~~L~Ls~N~LtsLP~~l~-~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~L~ 254 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENLQ-GNIKTLYANSNQLTSIPATLP--DTIQEMELSINRIT 254 (754)
T ss_pred cCceEEEeCCCCcCcCCcccccCCcEEEecCCCCCcCChhhc-cCCCEEECCCCccccCChhhh--ccccEEECcCCccC
Confidence 346677887777766555667778888888888888877653 478888888888887776543 46777777777643
Q ss_pred CCCC-CCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccccCCCCCc
Q 044302 219 IKTP-NFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRKFPHVGGS 297 (830)
Q Consensus 219 ~~~~-~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~~~~~~~~ 297 (830)
.+| .+ ..+|+.|++++| .+..+|..+. ++|+.|++++ +.++.+|..+ ..+|+.|++++|.+.. +|..+
T Consensus 255 -~LP~~l--~s~L~~L~Ls~N-~L~~LP~~l~--~sL~~L~Ls~-N~Lt~LP~~l-p~sL~~L~Ls~N~Lt~-LP~~l-- 323 (754)
T PRK15370 255 -ELPERL--PSALQSLDLFHN-KISCLPENLP--EELRYLSVYD-NSIRTLPAHL-PSGITHLNVQSNSLTA-LPETL-- 323 (754)
T ss_pred -cCChhH--hCCCCEEECcCC-ccCccccccC--CCCcEEECCC-CccccCcccc-hhhHHHHHhcCCcccc-CCccc--
Confidence 333 22 246677777653 4445555443 3566666666 3455555422 2345555555544332 22211
Q ss_pred cccceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEEec
Q 044302 298 MECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLD 377 (830)
Q Consensus 298 l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~ 377 (830)
.++|+.|.+++|.++.+|..+. ++|+.|++++|... .+|... .++|+.|+|+
T Consensus 324 ~~sL~~L~Ls~N~Lt~LP~~l~--------------------------~sL~~L~Ls~N~L~-~LP~~l-p~~L~~LdLs 375 (754)
T PRK15370 324 PPGLKTLEAGENALTSLPASLP--------------------------PELQVLDVSKNQIT-VLPETL-PPTITTLDVS 375 (754)
T ss_pred cccceeccccCCccccCChhhc--------------------------CcccEEECCCCCCC-cCChhh-cCCcCEEECC
Confidence 1345555555555554443331 34555555555432 233211 2456666666
Q ss_pred CCcccccCcccCCCCCccEEecCCccCcccccc----cccCCCCCCEEeccCCCCC
Q 044302 378 GTSITEVPSSIELLPGIELLNLNDCKNLVRLPR----SINGLKALKTLSLSGCCKL 429 (830)
Q Consensus 378 ~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~----~~~~l~~L~~L~L~~~~~l 429 (830)
+|.++.+|..+. +.|+.|++++|... .+|. ....++++..|++.+|+..
T Consensus 376 ~N~Lt~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 376 RNALTNLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcCCCCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 666666665432 35666666666543 3333 3334567777777777654
No 19
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.67 E-value=2.5e-18 Score=174.27 Aligned_cols=345 Identities=17% Similarity=0.170 Sum_probs=215.0
Q ss_pred ccEEEEEeeccCCCccccccChHhhhCCCCCceEEEcCcccC----CCccccccCcceEEEecCCCCCCCCCC--CCCCc
Q 044302 111 EVVEGMIIDDHFFPENEMHLSAKAFSLMTNLRLLKIGNVQLP----KGLEYLSNKLRLLVWHQYPLKSLPSNL--QLDKI 184 (830)
Q Consensus 111 ~~v~~i~l~~~~~~~~~~~~~~~~f~~l~~Lr~L~l~~~~l~----~~~~~l~~~Lr~L~l~~~~l~~lp~~~--~l~~L 184 (830)
.....|.++.. . ...+++.+|+.+++||.|+|++|.|+ +.|..++.-++.+..++|.|+++|... .+..|
T Consensus 67 ~~tveirLdqN-~---I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~sl 142 (498)
T KOG4237|consen 67 PETVEIRLDQN-Q---ISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSL 142 (498)
T ss_pred CcceEEEeccC-C---cccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHH
Confidence 34556667665 3 56899999999999999999999985 567778744555555669999999876 88889
Q ss_pred eEEEccCCChhhcc-cCCCCCCcccEEEccCCCCCCCCC-CCCCCCceeEEeeeCCccc------------ccccccccC
Q 044302 185 VEFEMCYSRIEELW-KGIKPLNTLKVMKLSHSENLIKTP-NFIEVPNLEVLDLEGCTRL------------REIHSSLVR 250 (830)
Q Consensus 185 ~~L~L~~n~i~~l~-~~~~~l~~L~~L~L~~~~~~~~~~-~~~~l~~L~~L~L~~~~~l------------~~~~~~l~~ 250 (830)
+.|.+.-|++.-++ ..+..+++|..|.+.+|....... .|..+..++.+.+..|..+ ...|..++.
T Consensus 143 qrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsg 222 (498)
T KOG4237|consen 143 QRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSG 222 (498)
T ss_pred HHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccc
Confidence 99998888888654 467888899999998887444333 5778888888887765422 112222222
Q ss_pred CCCccEE-------------------------ecCCCCCCccCCcccc--cCcccEEeccCcccccccCCCCCccccceE
Q 044302 251 HNKLILL-------------------------NLKGCTSLTTLPGEIF--MKSLKTLVLSGCLKLRKFPHVGGSMECLQE 303 (830)
Q Consensus 251 l~~L~~L-------------------------~L~~c~~l~~lp~~~~--l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~ 303 (830)
.....-. -.+.|......|...+ +++|++|+|++|.+...-+.+|.....+++
T Consensus 223 arc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~e 302 (498)
T KOG4237|consen 223 ARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQE 302 (498)
T ss_pred ceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhh
Confidence 2111111 1122333333444444 788888888888887777788888888888
Q ss_pred eeccccccccccc-chhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCc-----------------CCcc
Q 044302 304 LFLDETDIKEMPL-SIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKK-----------------FPQI 365 (830)
Q Consensus 304 L~L~~~~i~~l~~-~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~-----------------~~~~ 365 (830)
|.|..|++..+.. .|.++.+|+.|+|.+|++....|..|..+..|.+|++-.|+..-. .|.-
T Consensus 303 L~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~C 382 (498)
T KOG4237|consen 303 LYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRC 382 (498)
T ss_pred hhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCC
Confidence 8888888886665 567788888888888888888888888888888888766543211 1111
Q ss_pred cCCCCCcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEE
Q 044302 366 VGMEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEEL 445 (830)
Q Consensus 366 ~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L 445 (830)
.....++.+.++...+.+..... ...+--+.-+.| -..++-+.+..=-.+..++.+|..+ ...-++|
T Consensus 383 q~p~~~~~~~~~dv~~~~~~c~~--~ee~~~~~s~~c---------P~~c~c~~tVvRcSnk~lk~lp~~i--P~d~tel 449 (498)
T KOG4237|consen 383 QSPGFVRQIPISDVAFGDFRCGG--PEELGCLTSSPC---------PPPCTCLDTVVRCSNKLLKLLPRGI--PVDVTEL 449 (498)
T ss_pred CCCchhccccchhccccccccCC--ccccCCCCCCCC---------CCCcchhhhhHhhcccchhhcCCCC--CchhHHH
Confidence 12233444444444333221110 000000000000 1122333332222234445555433 2456788
Q ss_pred ecCCCcccCCCcccccCCCCcEEEcCCCCC
Q 044302 446 DISGTATRRPPCSIFHMKNLKTLSFSGCNG 475 (830)
Q Consensus 446 ~L~~n~i~~l~~~l~~l~~L~~L~L~~~~~ 475 (830)
++.+|.+..+|.. .+.+| .+++++|++
T Consensus 450 yl~gn~~~~vp~~--~~~~l-~~dls~n~i 476 (498)
T KOG4237|consen 450 YLDGNAITSVPDE--LLRSL-LLDLSNNRI 476 (498)
T ss_pred hcccchhcccCHH--HHhhh-hcccccCce
Confidence 8888888888876 55566 666776664
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.54 E-value=3.6e-16 Score=168.82 Aligned_cols=255 Identities=22% Similarity=0.212 Sum_probs=130.6
Q ss_pred ccccceEeeccccccc-----ccccchhcccCCcEEeccCCCCC------CCCccccccCccCcEEeecCCCCCCcCCc-
Q 044302 297 SMECLQELFLDETDIK-----EMPLSIEHLSGLILLTLKYCKNL------SSLPVTISSLKCLRTLKLSGCSKLKKFPQ- 364 (830)
Q Consensus 297 ~l~~L~~L~L~~~~i~-----~l~~~l~~l~~L~~L~L~~~~~~------~~~~~~l~~l~~L~~L~L~~~~~~~~~~~- 364 (830)
.+.+|++|.++++.++ .++..+...++|+.++++++... ..++..+..+++|+.|++++|......+.
T Consensus 21 ~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~ 100 (319)
T cd00116 21 KLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGV 100 (319)
T ss_pred HHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHH
Confidence 3344444444444442 23334444455555555554433 11223444555666666666555432221
Q ss_pred ccCC---CCCcEEEecCCccc-----ccCcccCCC-CCccEEecCCccCcc----cccccccCCCCCCEEeccCCCCCC-
Q 044302 365 IVGM---EGLSELYLDGTSIT-----EVPSSIELL-PGIELLNLNDCKNLV----RLPRSINGLKALKTLSLSGCCKLE- 430 (830)
Q Consensus 365 ~~~l---~~L~~L~L~~~~i~-----~l~~~~~~l-~~L~~L~L~~~~~l~----~l~~~~~~l~~L~~L~L~~~~~l~- 430 (830)
+..+ ++|+.|++++|.+. .+...+..+ ++|+.|++++|.... .++..+..+++|++|++++|....
T Consensus 101 ~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 180 (319)
T cd00116 101 LESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDA 180 (319)
T ss_pred HHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchH
Confidence 1111 33666666666554 122334445 677777777776552 233445556677777777766542
Q ss_pred ---ccCcccCCCCCccEEecCCCccc-----CCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCC
Q 044302 431 ---NVPDTLGQVESLEELDISGTATR-----RPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDC 502 (830)
Q Consensus 431 ---~~~~~l~~l~~L~~L~L~~n~i~-----~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~ 502 (830)
.++..+...++|++|++++|.+. .+...+..+++|++|++++|+..........-......+.|++|++++|
T Consensus 181 ~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n 260 (319)
T cd00116 181 GIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCN 260 (319)
T ss_pred HHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCC
Confidence 22333444567777777777654 2233444566777777777664321000000000012356777777777
Q ss_pred CCCCC---ccccccCCCCCCCEEeCCCCCCccc-----CcccCCC-CccCEeeccccc
Q 044302 503 GLGEG---AILSDIGNLHSLKALYLSENNFVTL-----PASISGL-FNLEYLKLEDCK 551 (830)
Q Consensus 503 ~l~~~---~~~~~l~~l~~L~~L~L~~n~l~~l-----p~~l~~L-~~L~~L~L~~c~ 551 (830)
.+++. .+...+..+++|+.+++++|.+..- ...+... +.|++|++.+++
T Consensus 261 ~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 261 DITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred CCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 66421 1223345556777777777777632 2233334 567777776654
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.51 E-value=4.2e-16 Score=140.45 Aligned_cols=156 Identities=23% Similarity=0.347 Sum_probs=98.1
Q ss_pred CcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCc
Q 044302 161 KLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCT 239 (830)
Q Consensus 161 ~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~ 239 (830)
.+..|.+++|.++.+|+.+ .+.+|++|++.+|+|+++|..++.+++|+.|++.-|+....+..|+.+|.|+.||+.+|+
T Consensus 34 ~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levldltynn 113 (264)
T KOG0617|consen 34 NITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLDLTYNN 113 (264)
T ss_pred hhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCchhhhhhccccc
Confidence 5667777778888888777 888888888888888888888888888888888887766666678888888888887754
Q ss_pred ccc-cccccccCCCCccEEecCCCCCCccCCcccc-cCcccEEeccCcccccccCCCCCccccceEeecccccccccccc
Q 044302 240 RLR-EIHSSLVRHNKLILLNLKGCTSLTTLPGEIF-MKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETDIKEMPLS 317 (830)
Q Consensus 240 ~l~-~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~ 317 (830)
.-+ .+|..|..++.|+-|.+++ +....+|.++. +++|+.|.+..|... .+|..++.++.|++|.+.+|.++.+|..
T Consensus 114 l~e~~lpgnff~m~tlralyl~d-ndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 114 LNENSLPGNFFYMTTLRALYLGD-NDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred cccccCCcchhHHHHHHHHHhcC-CCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChh
Confidence 322 3455555555555555555 34444444444 444444444443222 2344444444444444444444444443
Q ss_pred h
Q 044302 318 I 318 (830)
Q Consensus 318 l 318 (830)
+
T Consensus 192 l 192 (264)
T KOG0617|consen 192 L 192 (264)
T ss_pred h
Confidence 3
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.51 E-value=4.1e-16 Score=140.49 Aligned_cols=179 Identities=29% Similarity=0.490 Sum_probs=123.1
Q ss_pred cCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCC
Q 044302 361 KFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVE 440 (830)
Q Consensus 361 ~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~ 440 (830)
.++.+..+.+++.|.|++|+++.+|..+..+.+|+.|++.+|++ +.+|..+..++.|+.|+++-| .+..+|..|+.++
T Consensus 25 ~~~gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqi-e~lp~~issl~klr~lnvgmn-rl~~lprgfgs~p 102 (264)
T KOG0617|consen 25 ELPGLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQI-EELPTSISSLPKLRILNVGMN-RLNILPRGFGSFP 102 (264)
T ss_pred hcccccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchh-hhcChhhhhchhhhheecchh-hhhcCccccCCCc
Confidence 34455566677777777777777777777777777777776543 345555566666666665543 3344555555555
Q ss_pred CccEEecCCCccc--CCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCC
Q 044302 441 SLEELDISGTATR--RPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHS 518 (830)
Q Consensus 441 ~L~~L~L~~n~i~--~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~ 518 (830)
.|+.||++.|++. .+|.. |-.+..|+.|.+++|.+ +.+|.+++++++
T Consensus 103 ~levldltynnl~e~~lpgn-----------------------------ff~m~tlralyl~dndf--e~lp~dvg~lt~ 151 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGN-----------------------------FFYMTTLRALYLGDNDF--EILPPDVGKLTN 151 (264)
T ss_pred hhhhhhccccccccccCCcc-----------------------------hhHHHHHHHHHhcCCCc--ccCChhhhhhcc
Confidence 5555555555544 33333 44455666667777766 458999999999
Q ss_pred CCEEeCCCCCCcccCcccCCCCccCEeeccccccccccCCCCCCcceeeccCCccccc
Q 044302 519 LKALYLSENNFVTLPASISGLFNLEYLKLEDCKRLQSLPQLPPNVHNVRLNGCASLVT 576 (830)
Q Consensus 519 L~~L~L~~n~l~~lp~~l~~L~~L~~L~L~~c~~l~~lp~lp~sL~~L~i~~C~~L~~ 576 (830)
|+.|.+.+|.+.++|..++.+++|++|.|.+|+ + ..+|+.|..|++.+-.....
T Consensus 152 lqil~lrdndll~lpkeig~lt~lrelhiqgnr-l---~vlppel~~l~l~~~k~v~r 205 (264)
T KOG0617|consen 152 LQILSLRDNDLLSLPKEIGDLTRLRELHIQGNR-L---TVLPPELANLDLVGNKQVMR 205 (264)
T ss_pred eeEEeeccCchhhCcHHHHHHHHHHHHhcccce-e---eecChhhhhhhhhhhHHHHh
Confidence 999999999999999999999999999999985 3 34667777777666554433
No 23
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.40 E-value=2.8e-14 Score=154.10 Aligned_cols=105 Identities=26% Similarity=0.286 Sum_probs=53.6
Q ss_pred CCcEEEecCCccc-----ccCcccCCCCCccEEecCCccCcccccccc-----cCCCCCCEEeccCCCCC----CccCcc
Q 044302 370 GLSELYLDGTSIT-----EVPSSIELLPGIELLNLNDCKNLVRLPRSI-----NGLKALKTLSLSGCCKL----ENVPDT 435 (830)
Q Consensus 370 ~L~~L~L~~~~i~-----~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~-----~~l~~L~~L~L~~~~~l----~~~~~~ 435 (830)
+|+.|++++|.+. .+...+..+++|++|++++|.........+ ...+.|+.|++++|... ..+...
T Consensus 194 ~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~ 273 (319)
T cd00116 194 NLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEV 273 (319)
T ss_pred CCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHH
Confidence 4444444444433 223334455666666666665443111111 12356777777766554 123334
Q ss_pred cCCCCCccEEecCCCcccCC-----CcccccC-CCCcEEEcCCCC
Q 044302 436 LGQVESLEELDISGTATRRP-----PCSIFHM-KNLKTLSFSGCN 474 (830)
Q Consensus 436 l~~l~~L~~L~L~~n~i~~l-----~~~l~~l-~~L~~L~L~~~~ 474 (830)
+..+++|+++++++|.+..- ...+... +.|+.|++.+++
T Consensus 274 ~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 274 LAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred HhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 45556777777777776632 2222233 567777776654
No 24
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.19 E-value=1.8e-11 Score=145.11 Aligned_cols=206 Identities=26% Similarity=0.349 Sum_probs=137.2
Q ss_pred CCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCC-CccCCcccc--cCcccEEeccCcccccccCCCCCc
Q 044302 221 TPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTS-LTTLPGEIF--MKSLKTLVLSGCLKLRKFPHVGGS 297 (830)
Q Consensus 221 ~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~-l~~lp~~~~--l~~L~~L~L~~~~~~~~~~~~~~~ 297 (830)
.|........+.+.+.++ ....++.... .++|++|-+.++.. +..++..++ ++.|++|||++|.....+|..++.
T Consensus 516 ~~~~~~~~~~rr~s~~~~-~~~~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~ 593 (889)
T KOG4658|consen 516 IPQVKSWNSVRRMSLMNN-KIEHIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE 593 (889)
T ss_pred cccccchhheeEEEEecc-chhhccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh
Confidence 455555667777777763 4444444433 34798998888553 777777655 999999999999999999999999
Q ss_pred cccceEeecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCC---cCCcccCCCCCcEE
Q 044302 298 MECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLK---KFPQIVGMEGLSEL 374 (830)
Q Consensus 298 l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~---~~~~~~~l~~L~~L 374 (830)
+-+|++|+++++.+..+|..++++..|.+|++..+.....+|.....+++|++|.+....... .+..+..+.+|+.+
T Consensus 594 Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~l 673 (889)
T KOG4658|consen 594 LVHLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENL 673 (889)
T ss_pred hhhhhcccccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhh
Confidence 999999999999999999999999999999999998888888778889999999987654111 11223345555555
Q ss_pred EecCCcccccCcccCCCCCcc----EEecCCccCcccccccccCCCCCCEEeccCCCCCC
Q 044302 375 YLDGTSITEVPSSIELLPGIE----LLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLE 430 (830)
Q Consensus 375 ~L~~~~i~~l~~~~~~l~~L~----~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~ 430 (830)
....... .+-..+..++.|. .+.+.+ ......+..+..+.+|+.|.+.+|...+
T Consensus 674 s~~~~s~-~~~e~l~~~~~L~~~~~~l~~~~-~~~~~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 674 SITISSV-LLLEDLLGMTRLRSLLQSLSIEG-CSKRTLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred eeecchh-HhHhhhhhhHHHHHHhHhhhhcc-cccceeecccccccCcceEEEEcCCCch
Confidence 5543332 1111112222222 222211 2222333445556666666666665543
No 25
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=5.7e-11 Score=123.18 Aligned_cols=86 Identities=24% Similarity=0.203 Sum_probs=49.5
Q ss_pred CCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccc-----cCCCCCCCEEeCCCCCCcccC--c
Q 044302 462 MKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSD-----IGNLHSLKALYLSENNFVTLP--A 534 (830)
Q Consensus 462 l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~-----l~~l~~L~~L~L~~n~l~~lp--~ 534 (830)
+..|+.|+|++|+..... ..+..+.|+.|..|+++.|++.+-..|+. ...+++|++|++..|++..++ .
T Consensus 245 ~~~L~~LdLs~N~li~~~----~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~ 320 (505)
T KOG3207|consen 245 LQTLQELDLSNNNLIDFD----QGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLN 320 (505)
T ss_pred hhHHhhccccCCcccccc----cccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccc
Confidence 444555555555433211 22335566666666666666655444444 455777788888877776554 2
Q ss_pred ccCCCCccCEeeccccc
Q 044302 535 SISGLFNLEYLKLEDCK 551 (830)
Q Consensus 535 ~l~~L~~L~~L~L~~c~ 551 (830)
.+..+++|+.|.+..++
T Consensus 321 ~l~~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 321 HLRTLENLKHLRITLNY 337 (505)
T ss_pred hhhccchhhhhhccccc
Confidence 45566677777666554
No 26
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=7.8e-11 Score=122.17 Aligned_cols=212 Identities=20% Similarity=0.186 Sum_probs=95.5
Q ss_pred hcccCCcEEeccCCCCCCCCc-cccccCccCcEEeecCCCCCCcCCc---ccCCCCCcEEEecCCcccccCcc--cCCCC
Q 044302 319 EHLSGLILLTLKYCKNLSSLP-VTISSLKCLRTLKLSGCSKLKKFPQ---IVGMEGLSELYLDGTSITEVPSS--IELLP 392 (830)
Q Consensus 319 ~~l~~L~~L~L~~~~~~~~~~-~~l~~l~~L~~L~L~~~~~~~~~~~---~~~l~~L~~L~L~~~~i~~l~~~--~~~l~ 392 (830)
.++.+|+.+.|+++....... .....|++++.|+|++|-.....+- ...+|+|+.|+|+.|.+....++ -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 456677777777665432211 2445566666666666543332221 22355555555555555433222 12445
Q ss_pred CccEEecCCccCcc-cccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCcccCCC--cccccCCCCcEEE
Q 044302 393 GIELLNLNDCKNLV-RLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATRRPP--CSIFHMKNLKTLS 469 (830)
Q Consensus 393 ~L~~L~L~~~~~l~-~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~--~~l~~l~~L~~L~ 469 (830)
.|+.|.|+.|...- .+......+|+|+.|.+..|............+..|++|+|++|++...+ ...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 55555555554432 12222334555555555555422222222333444555555555544443 2334455555555
Q ss_pred cCCCCCCCCCCccc-cCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCCCCc
Q 044302 470 FSGCNGPPSTASSL-MLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFV 530 (830)
Q Consensus 470 L~~~~~~~~~~~~~-~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~ 530 (830)
++.|.+........ .......+++|+.|+++.|++.+-.....+..+++|+.|.+..|.+.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 55554332211111 00112344555555555555543222333444445555554444443
No 27
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.89 E-value=4.3e-10 Score=110.87 Aligned_cols=201 Identities=23% Similarity=0.226 Sum_probs=121.1
Q ss_pred CccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEecCCcc---CcccccccccC
Q 044302 338 LPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCK---NLVRLPRSING 414 (830)
Q Consensus 338 ~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~---~l~~l~~~~~~ 414 (830)
+|..+.-+++|+.+.++.|.......-...-|.|+++.+.+..+...|..+ ....+ .+...-. .....-..+..
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~~~l~-pe~~~--~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDVPSLL-PETIL--ADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchhheeceeecCchhheeeeeccccccccccc-chhhh--cCccCCCCCccCCceEEecch
Confidence 344455566666666666643222222223355666666665555433211 00111 1111100 00011122333
Q ss_pred CCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCcccCCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCcc
Q 044302 415 LKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATRRPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSL 494 (830)
Q Consensus 415 l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L 494 (830)
+..|+++++++|.+ +.+.++..-.|.++.|+++.|.+..+.. +..+++|+.|+|++|....... .-..+-+.
T Consensus 283 Wq~LtelDLS~N~I-~~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~G------wh~KLGNI 354 (490)
T KOG1259|consen 283 WQELTELDLSGNLI-TQIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVG------WHLKLGNI 354 (490)
T ss_pred Hhhhhhccccccch-hhhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhh------hHhhhcCE
Confidence 56677788887654 3345566667788888888888877664 7778888888888877543211 12345677
Q ss_pred CeecCCCCCCCCCccccccCCCCCCCEEeCCCCCCcccC--cccCCCCccCEeecccccc
Q 044302 495 TKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFVTLP--ASISGLFNLEYLKLEDCKR 552 (830)
Q Consensus 495 ~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~~lp--~~l~~L~~L~~L~L~~c~~ 552 (830)
+.|.|+.|.+. ....++.+-+|..|++++|+|..+. .++++||.|+.|.|.+||.
T Consensus 355 KtL~La~N~iE---~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 355 KTLKLAQNKIE---TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred eeeehhhhhHh---hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 88888888775 4556777888899999999888654 4788999999999999873
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.86 E-value=2.3e-09 Score=119.22 Aligned_cols=190 Identities=22% Similarity=0.262 Sum_probs=98.0
Q ss_pred eEEEcCcccCCCccccc--cCcceEEEecCCCCCCCCCCCCC--CceEEEccCCChhhcccCCCCCCcccEEEccCCCCC
Q 044302 143 LLKIGNVQLPKGLEYLS--NKLRLLVWHQYPLKSLPSNLQLD--KIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENL 218 (830)
Q Consensus 143 ~L~l~~~~l~~~~~~l~--~~Lr~L~l~~~~l~~lp~~~~l~--~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~ 218 (830)
.+.+..+.+......+. +.++.|++.++++..+|....+. +|++|++++|.+.++|..+..+++|+.|++++|+..
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~ 176 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS 176 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhh
Confidence 45556655532222221 25666667667776666655332 677777777777666656666666666666666533
Q ss_pred CCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccc-cCcccEEeccCcccccccCCCCCc
Q 044302 219 IKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIF-MKSLKTLVLSGCLKLRKFPHVGGS 297 (830)
Q Consensus 219 ~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~~~~ 297 (830)
...+..+.+++|+.|++++ +.+..+|..+.....|++|.++++..+ ..+..+. +.++..+.+.++... .++..++.
T Consensus 177 ~l~~~~~~~~~L~~L~ls~-N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~ 253 (394)
T COG4886 177 DLPKLLSNLSNLNNLDLSG-NKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGN 253 (394)
T ss_pred hhhhhhhhhhhhhheeccC-CccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhcc
Confidence 3333333566666666666 345555555444555666666553222 2222222 444444444433222 12344444
Q ss_pred cccceEeecccccccccccchhcccCCcEEeccCCCCCC
Q 044302 298 MECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKNLS 336 (830)
Q Consensus 298 l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~ 336 (830)
+.+++.|++++|.+..++. ++.+.+++.|+++++....
T Consensus 254 l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 254 LSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred ccccceecccccccccccc-ccccCccCEEeccCccccc
Confidence 5555555555555555544 4444555555554444433
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.84 E-value=4.8e-09 Score=116.73 Aligned_cols=178 Identities=27% Similarity=0.318 Sum_probs=88.8
Q ss_pred CCceeEEeeeCCcccccccccccCCC-CccEEecCCCCCCccCCcccc-cCcccEEeccCcccccccCCCCCccccceEe
Q 044302 227 VPNLEVLDLEGCTRLREIHSSLVRHN-KLILLNLKGCTSLTTLPGEIF-MKSLKTLVLSGCLKLRKFPHVGGSMECLQEL 304 (830)
Q Consensus 227 l~~L~~L~L~~~~~l~~~~~~l~~l~-~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L 304 (830)
++.++.|++.+ +.+..++.....+. +|+.|++++ +.+..+|..+. +++|+.|++++|.+.. ++...+..++|+.|
T Consensus 115 ~~~l~~L~l~~-n~i~~i~~~~~~~~~nL~~L~l~~-N~i~~l~~~~~~l~~L~~L~l~~N~l~~-l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDN-NNITDIPPLIGLLKSNLKELDLSD-NKIESLPSPLRNLPNLKNLDLSFNDLSD-LPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCC-cccccCccccccchhhcccccccc-cchhhhhhhhhccccccccccCCchhhh-hhhhhhhhhhhhhe
Confidence 34444444444 23344444444442 444444444 44444433333 4455555554443322 22222355566666
Q ss_pred ecccccccccccchhcccCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEEecCCccccc
Q 044302 305 FLDETDIKEMPLSIEHLSGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEV 384 (830)
Q Consensus 305 ~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l 384 (830)
++++|.+..+|..+.....|++|.+.+|. ....+..+..+.++..+.+.++........+..+++++.|++++|.+..+
T Consensus 192 ~ls~N~i~~l~~~~~~~~~L~~l~~~~N~-~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i 270 (394)
T COG4886 192 DLSGNKISDLPPEIELLSALEELDLSNNS-IIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSI 270 (394)
T ss_pred eccCCccccCchhhhhhhhhhhhhhcCCc-ceecchhhhhcccccccccCCceeeeccchhccccccceecccccccccc
Confidence 66666666666655555556666666654 22223344555555555544444333233344455566666666666666
Q ss_pred CcccCCCCCccEEecCCccCccccc
Q 044302 385 PSSIELLPGIELLNLNDCKNLVRLP 409 (830)
Q Consensus 385 ~~~~~~l~~L~~L~L~~~~~l~~l~ 409 (830)
+. ++.+.+++.|+++++......+
T Consensus 271 ~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 271 SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred cc-ccccCccCEEeccCccccccch
Confidence 55 5555666666666655554444
No 30
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.84 E-value=1e-09 Score=108.24 Aligned_cols=134 Identities=23% Similarity=0.272 Sum_probs=100.0
Q ss_pred CCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEec
Q 044302 180 QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNL 259 (830)
Q Consensus 180 ~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L 259 (830)
.++.|++|||++|.|+.+-++.+-+|.++.|++++|. +..+.++..+++|++|||++| .+..+...-.++.+.+.|.|
T Consensus 282 TWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~-i~~v~nLa~L~~L~~LDLS~N-~Ls~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 282 TWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNR-IRTVQNLAELPQLQLLDLSGN-LLAECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hHhhhhhccccccchhhhhhhhhhccceeEEeccccc-eeeehhhhhcccceEeecccc-hhHhhhhhHhhhcCEeeeeh
Confidence 3467999999999999998889999999999999996 445566888999999999985 45555555556778888888
Q ss_pred CCCCCCccCCcccccCcccEEeccCcccccc-cCCCCCccccceEeeccccccccccc
Q 044302 260 KGCTSLTTLPGEIFMKSLKTLVLSGCLKLRK-FPHVGGSMECLQELFLDETDIKEMPL 316 (830)
Q Consensus 260 ~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~-~~~~~~~l~~L~~L~L~~~~i~~l~~ 316 (830)
++ +.+.++...-.+.+|..||+++|++... -...+|+++.|+.+.+.+|.+..++.
T Consensus 360 a~-N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 360 AQ-NKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hh-hhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 88 6777766544477777777777765432 22456777777777777776665553
No 31
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.81 E-value=1.6e-10 Score=123.37 Aligned_cols=168 Identities=17% Similarity=0.217 Sum_probs=121.5
Q ss_pred ceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCccc
Q 044302 163 RLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRL 241 (830)
Q Consensus 163 r~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l 241 (830)
...+++.|++..+|..+ .+..|+.|.|.+|.|..+|..+..+..|.+|+|+.|+....+..++.+| |+.|.+++ +.+
T Consensus 78 ~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvli~sN-Nkl 155 (722)
T KOG0532|consen 78 VFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVLIVSN-NKL 155 (722)
T ss_pred hhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeEEEec-Ccc
Confidence 34567777777777776 5667777777777777777777778888888888777555555566555 77777776 567
Q ss_pred ccccccccCCCCccEEecCCCCCCccCCcccc-cCcccEEeccCcccccccCCCCCccccceEeecccccccccccchhc
Q 044302 242 REIHSSLVRHNKLILLNLKGCTSLTTLPGEIF-MKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETDIKEMPLSIEH 320 (830)
Q Consensus 242 ~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~-l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~l~~ 320 (830)
+.+|..++.+.+|..|+.+. +.+.++|..+. +.+|+.|.+..|.... +|+.+..+ .|..|+++.|++..+|..|.+
T Consensus 156 ~~lp~~ig~~~tl~~ld~s~-nei~slpsql~~l~slr~l~vrRn~l~~-lp~El~~L-pLi~lDfScNkis~iPv~fr~ 232 (722)
T KOG0532|consen 156 TSLPEEIGLLPTLAHLDVSK-NEIQSLPSQLGYLTSLRDLNVRRNHLED-LPEELCSL-PLIRLDFSCNKISYLPVDFRK 232 (722)
T ss_pred ccCCcccccchhHHHhhhhh-hhhhhchHHhhhHHHHHHHHHhhhhhhh-CCHHHhCC-ceeeeecccCceeecchhhhh
Confidence 77777788777888888777 56667776666 7788888777765543 44444433 477788888888888888888
Q ss_pred ccCCcEEeccCCCCC
Q 044302 321 LSGLILLTLKYCKNL 335 (830)
Q Consensus 321 l~~L~~L~L~~~~~~ 335 (830)
++.|++|.|.+|...
T Consensus 233 m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 233 MRHLQVLQLENNPLQ 247 (722)
T ss_pred hhhheeeeeccCCCC
Confidence 888888888877643
No 32
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.77 E-value=3e-10 Score=121.39 Aligned_cols=189 Identities=23% Similarity=0.333 Sum_probs=116.0
Q ss_pred EEEecCCCCCCCCCC---CCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCccc
Q 044302 165 LVWHQYPLKSLPSNL---QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRL 241 (830)
Q Consensus 165 L~l~~~~l~~lp~~~---~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l 241 (830)
|.|++-.++.+|... .+..-...|++.|++..+|..+..+..|..+.|..|. +
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~------------------------~ 110 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNC------------------------I 110 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhcc------------------------c
Confidence 445555556665443 4555556666777666666666655555555555554 3
Q ss_pred ccccccccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccccCCCCCccccceEeecccccccccccchhcc
Q 044302 242 REIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRKFPHVGGSMECLQELFLDETDIKEMPLSIEHL 321 (830)
Q Consensus 242 ~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~l~~l 321 (830)
..+|..+.++..|.+|+|+. +.+..+|..++.--|+.|.+++| ....+|+.++....|..|+.+.|.+..+|..++.+
T Consensus 111 r~ip~~i~~L~~lt~l~ls~-NqlS~lp~~lC~lpLkvli~sNN-kl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l 188 (722)
T KOG0532|consen 111 RTIPEAICNLEALTFLDLSS-NQLSHLPDGLCDLPLKVLIVSNN-KLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYL 188 (722)
T ss_pred eecchhhhhhhHHHHhhhcc-chhhcCChhhhcCcceeEEEecC-ccccCCcccccchhHHHhhhhhhhhhhchHHhhhH
Confidence 44555555555666666655 55666666666555666666654 34556666677777788888888888888777777
Q ss_pred cCCcEEeccCCCCCCCCccccccCccCcEEeecCCCCCCcCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEecCC
Q 044302 322 SGLILLTLKYCKNLSSLPVTISSLKCLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNLND 401 (830)
Q Consensus 322 ~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~ 401 (830)
..|+.|.++.|..... |..+..| .|..|++++|++..+|..|.++..|++|-|.+
T Consensus 189 ~slr~l~vrRn~l~~l-p~El~~L------------------------pLi~lDfScNkis~iPv~fr~m~~Lq~l~Len 243 (722)
T KOG0532|consen 189 TSLRDLNVRRNHLEDL-PEELCSL------------------------PLIRLDFSCNKISYLPVDFRKMRHLQVLQLEN 243 (722)
T ss_pred HHHHHHHHhhhhhhhC-CHHHhCC------------------------ceeeeecccCceeecchhhhhhhhheeeeecc
Confidence 7777777776654332 2222211 24466666666666666666666666666666
Q ss_pred ccC
Q 044302 402 CKN 404 (830)
Q Consensus 402 ~~~ 404 (830)
|+.
T Consensus 244 NPL 246 (722)
T KOG0532|consen 244 NPL 246 (722)
T ss_pred CCC
Confidence 553
No 33
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.72 E-value=4.5e-09 Score=100.19 Aligned_cols=127 Identities=29% Similarity=0.353 Sum_probs=47.1
Q ss_pred CCCCccEEecCCCcccCCCcccc-cCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCcccccc-CC
Q 044302 438 QVESLEELDISGTATRRPPCSIF-HMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDI-GN 515 (830)
Q Consensus 438 ~l~~L~~L~L~~n~i~~l~~~l~-~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l-~~ 515 (830)
+..++++|+|.+|.|..+. .++ .+.+|+.|++++|.+.. ++.+..++.|++|++++|.+++ +...+ ..
T Consensus 17 n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~-------l~~l~~L~~L~~L~L~~N~I~~--i~~~l~~~ 86 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITK-------LEGLPGLPRLKTLDLSNNRISS--ISEGLDKN 86 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S---------TT----TT--EEE--SS---S---CHHHHHH
T ss_pred ccccccccccccccccccc-chhhhhcCCCEEECCCCCCcc-------ccCccChhhhhhcccCCCCCCc--cccchHHh
Confidence 3456777888888877764 344 47788888888887653 4456778888999999998874 43334 36
Q ss_pred CCCCCEEeCCCCCCcccC--cccCCCCccCEeeccccccccccCCCCCCcceeeccCCcccccccc
Q 044302 516 LHSLKALYLSENNFVTLP--ASISGLFNLEYLKLEDCKRLQSLPQLPPNVHNVRLNGCASLVTLLG 579 (830)
Q Consensus 516 l~~L~~L~L~~n~l~~lp--~~l~~L~~L~~L~L~~c~~l~~lp~lp~sL~~L~i~~C~~L~~~~~ 579 (830)
+|+|+.|++++|+|..+. ..+..+++|+.|+|.+||--+. + .-+...+..||+|+.+..
T Consensus 87 lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~----~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 87 LPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-K----NYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-T----THHHHHHHH-TT-SEETT
T ss_pred CCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-h----hHHHHHHHHcChhheeCC
Confidence 899999999999888654 3567889999999999985332 2 233334455666665554
No 34
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.71 E-value=6e-10 Score=112.77 Aligned_cols=242 Identities=19% Similarity=0.213 Sum_probs=147.1
Q ss_pred CCCccccceEeeccccccc-----ccccchhcccCCcEEeccCCCC---CCCCccccccCccCcEEeecCCCCCCcCCcc
Q 044302 294 VGGSMECLQELFLDETDIK-----EMPLSIEHLSGLILLTLKYCKN---LSSLPVTISSLKCLRTLKLSGCSKLKKFPQI 365 (830)
Q Consensus 294 ~~~~l~~L~~L~L~~~~i~-----~l~~~l~~l~~L~~L~L~~~~~---~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~ 365 (830)
....+..++++++++|.+. .+...+.+.++|+..++++.-. ...+|..+..+ .+.+
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l----------------~~aL 88 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKML----------------SKAL 88 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHH----------------HHHH
Confidence 3455677778888887775 3344555566666666665311 11222211000 0112
Q ss_pred cCCCCCcEEEecCCccc-----ccCcccCCCCCccEEecCCccCccc-------------ccccccCCCCCCEEeccCCC
Q 044302 366 VGMEGLSELYLDGTSIT-----EVPSSIELLPGIELLNLNDCKNLVR-------------LPRSINGLKALKTLSLSGCC 427 (830)
Q Consensus 366 ~~l~~L~~L~L~~~~i~-----~l~~~~~~l~~L~~L~L~~~~~l~~-------------l~~~~~~l~~L~~L~L~~~~ 427 (830)
.+.+.|++|+|++|.+. .+-..+..+..|++|.|.+|..... ...-...-+.|+++...+|.
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR 168 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc
Confidence 23445555555555443 1222244566666666666654322 11223445778888887765
Q ss_pred CCCc----cCcccCCCCCccEEecCCCcccC-----CCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeec
Q 044302 428 KLEN----VPDTLGQVESLEELDISGTATRR-----PPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLD 498 (830)
Q Consensus 428 ~l~~----~~~~l~~l~~L~~L~L~~n~i~~-----l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~ 498 (830)
.-.. +...+...+.|+++.+..|.|.. +...+.++++|+.|+|.+|........ .....+..+++|++|+
T Consensus 169 len~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~-~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 169 LENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV-ALAKALSSWPHLRELN 247 (382)
T ss_pred cccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH-HHHHHhcccchheeec
Confidence 4432 33556777889999999888762 234567899999999999876542211 1122366788999999
Q ss_pred CCCCCCCCCcccc---c-cCCCCCCCEEeCCCCCCc-----ccCcccCCCCccCEeecccccc
Q 044302 499 LSDCGLGEGAILS---D-IGNLHSLKALYLSENNFV-----TLPASISGLFNLEYLKLEDCKR 552 (830)
Q Consensus 499 Ls~~~l~~~~~~~---~-l~~l~~L~~L~L~~n~l~-----~lp~~l~~L~~L~~L~L~~c~~ 552 (830)
+++|.+....... . -...|+|+.|.+.+|.++ .+-..+...+.|+.|+|++|+.
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 9999887543221 1 234799999999999988 2344566788999999999963
No 35
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.70 E-value=9e-09 Score=98.14 Aligned_cols=87 Identities=23% Similarity=0.342 Sum_probs=16.6
Q ss_pred CCCCCCCCCCCCceEEEccCCChhhcccCCC-CCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCcccccccccc-c
Q 044302 172 LKSLPSNLQLDKIVEFEMCYSRIEELWKGIK-PLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRLREIHSSL-V 249 (830)
Q Consensus 172 l~~lp~~~~l~~L~~L~L~~n~i~~l~~~~~-~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l-~ 249 (830)
++.+|...++.++++|+|++|.|+.+. .++ .+.+|+.|+|++|. +..++.+..+++|++|++++| .+..+...+ .
T Consensus 9 i~~~~~~~n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~-I~~l~~l~~L~~L~~L~L~~N-~I~~i~~~l~~ 85 (175)
T PF14580_consen 9 IEQIAQYNNPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQ-ITKLEGLPGLPRLKTLDLSNN-RISSISEGLDK 85 (175)
T ss_dssp ----------------------------S--TT-TT--EEE-TTS---S--TT----TT--EEE--SS----S-CHHHHH
T ss_pred ccccccccccccccccccccccccccc-chhhhhcCCCEEECCCCC-CccccCccChhhhhhcccCCC-CCCccccchHH
Confidence 333444334445555555555555543 333 35555666666554 333445555555666665553 233333222 2
Q ss_pred CCCCccEEecCC
Q 044302 250 RHNKLILLNLKG 261 (830)
Q Consensus 250 ~l~~L~~L~L~~ 261 (830)
.+++|+.|.+++
T Consensus 86 ~lp~L~~L~L~~ 97 (175)
T PF14580_consen 86 NLPNLQELYLSN 97 (175)
T ss_dssp H-TT--EEE-TT
T ss_pred hCCcCCEEECcC
Confidence 345555555554
No 36
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.66 E-value=2.1e-09 Score=108.89 Aligned_cols=237 Identities=19% Similarity=0.140 Sum_probs=134.3
Q ss_pred cCcccEEeccCccccc----ccCCCCCccccceEeecccccc----ccccc-------chhcccCCcEEeccCCCCCCCC
Q 044302 274 MKSLKTLVLSGCLKLR----KFPHVGGSMECLQELFLDETDI----KEMPL-------SIEHLSGLILLTLKYCKNLSSL 338 (830)
Q Consensus 274 l~~L~~L~L~~~~~~~----~~~~~~~~l~~L~~L~L~~~~i----~~l~~-------~l~~l~~L~~L~L~~~~~~~~~ 338 (830)
+.+++.++|+||.+-. .+...+.+.++|++.+++.--. ..+|. .+...++|++|+|++|......
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 7889999999998753 3344566777888888875322 24454 3455678999999998776654
Q ss_pred cc----ccccCccCcEEeecCCCCCCcCC--------------cccCCCCCcEEEecCCcccccCc-----ccCCCCCcc
Q 044302 339 PV----TISSLKCLRTLKLSGCSKLKKFP--------------QIVGMEGLSELYLDGTSITEVPS-----SIELLPGIE 395 (830)
Q Consensus 339 ~~----~l~~l~~L~~L~L~~~~~~~~~~--------------~~~~l~~L~~L~L~~~~i~~l~~-----~~~~l~~L~ 395 (830)
+. -+.++..|++|.|.+|..-..-. .....+.|+++....|.+..-+. .++..+.|+
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~le 188 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLE 188 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccc
Confidence 43 35678888888888886443211 12234556666666665543322 234444555
Q ss_pred EEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCccc-----CCCcccccCCCCcEEEc
Q 044302 396 LLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATR-----RPPCSIFHMKNLKTLSF 470 (830)
Q Consensus 396 ~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~-----~l~~~l~~l~~L~~L~L 470 (830)
.+.+..|.+...-- ..+...+..+++|+.|+|..|-++ .+...+..+++|+.|++
T Consensus 189 evr~~qN~I~~eG~--------------------~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l 248 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGV--------------------TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNL 248 (382)
T ss_pred eEEEecccccCchh--------------------HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecc
Confidence 55554443322100 112233445555555555555544 12223444566666666
Q ss_pred CCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCc---cccccCCCCCCCEEeCCCCCCc
Q 044302 471 SGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGA---ILSDIGNLHSLKALYLSENNFV 530 (830)
Q Consensus 471 ~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~---~~~~l~~l~~L~~L~L~~n~l~ 530 (830)
++|.........+.-..-...|+|+.|.+.+|.++... +...+...|.|+.|+|++|.+.
T Consensus 249 ~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 249 GDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 66664432111100000223577888888888775322 1223445788888888888773
No 37
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.46 E-value=4e-09 Score=109.12 Aligned_cols=84 Identities=30% Similarity=0.399 Sum_probs=54.3
Q ss_pred CcccEEEccCCCCCCCCC---CCCCCCceeEEeeeCCcccccc--cccccCCCCccEEecCCCCCCccCCcc-cc--cCc
Q 044302 205 NTLKVMKLSHSENLIKTP---NFIEVPNLEVLDLEGCTRLREI--HSSLVRHNKLILLNLKGCTSLTTLPGE-IF--MKS 276 (830)
Q Consensus 205 ~~L~~L~L~~~~~~~~~~---~~~~l~~L~~L~L~~~~~l~~~--~~~l~~l~~L~~L~L~~c~~l~~lp~~-~~--l~~ 276 (830)
..|+.|.++++.....-+ ...++|++++|.+.+|..++.. -..-..+++|++|++..|..++...-. +. +++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 457777788776443322 2457888888888888765532 122345688888888888877754322 21 777
Q ss_pred ccEEeccCcccc
Q 044302 277 LKTLVLSGCLKL 288 (830)
Q Consensus 277 L~~L~L~~~~~~ 288 (830)
|++|+++.|...
T Consensus 218 L~~lNlSwc~qi 229 (483)
T KOG4341|consen 218 LKYLNLSWCPQI 229 (483)
T ss_pred HHHhhhccCchh
Confidence 777777777543
No 38
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.45 E-value=1.1e-06 Score=93.96 Aligned_cols=61 Identities=26% Similarity=0.577 Sum_probs=36.5
Q ss_pred CCCCcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccC
Q 044302 368 MEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVP 433 (830)
Q Consensus 368 l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~ 433 (830)
+.+++.|++++|.++.+|. ..++|+.|.+++|..+..+|..+ .++|+.|++++|..+..+|
T Consensus 51 ~~~l~~L~Is~c~L~sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP 111 (426)
T PRK15386 51 ARASGRLYIKDCDIESLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLP 111 (426)
T ss_pred hcCCCEEEeCCCCCcccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccccc
Confidence 3455566666666666662 23457777777777766666544 2466677776665554444
No 39
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.40 E-value=4.2e-08 Score=109.39 Aligned_cols=194 Identities=24% Similarity=0.275 Sum_probs=127.9
Q ss_pred hCCCCCceEEEcCcccCCC---ccccccCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcccEEE
Q 044302 136 SLMTNLRLLKIGNVQLPKG---LEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMK 211 (830)
Q Consensus 136 ~~l~~Lr~L~l~~~~l~~~---~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~ 211 (830)
..+..++.+.+..|.+... +..+ .+|..|++.+|.++.+.... .+.+|++|++++|.|+++. ++..++.|+.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~~~l~~~-~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKILNHLSKL-KSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE-GLSTLTLLKELN 146 (414)
T ss_pred HHhHhHHhhccchhhhhhhhcccccc-cceeeeeccccchhhcccchhhhhcchheecccccccccc-chhhccchhhhe
Confidence 3455555555666666542 2223 47888888888888887733 7888888888888888875 677777888888
Q ss_pred ccCCCCCCCCCCCCCCCceeEEeeeCCccccccccc-ccCCCCccEEecCCCCCCccCCcccccCcccEEeccCcccccc
Q 044302 212 LSHSENLIKTPNFIEVPNLEVLDLEGCTRLREIHSS-LVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLVLSGCLKLRK 290 (830)
Q Consensus 212 L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~-l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~L~~~~~~~~ 290 (830)
+++|. +..+..+..+++|+.+++++|.. ..+... ...+.+|+.+.+.+ +.+..+.....+..+..+++..+.+...
T Consensus 147 l~~N~-i~~~~~~~~l~~L~~l~l~~n~i-~~ie~~~~~~~~~l~~l~l~~-n~i~~i~~~~~~~~l~~~~l~~n~i~~~ 223 (414)
T KOG0531|consen 147 LSGNL-ISDISGLESLKSLKLLDLSYNRI-VDIENDELSELISLEELDLGG-NSIREIEGLDLLKKLVLLSLLDNKISKL 223 (414)
T ss_pred eccCc-chhccCCccchhhhcccCCcchh-hhhhhhhhhhccchHHHhccC-CchhcccchHHHHHHHHhhcccccceec
Confidence 88885 55666777788888888888644 333322 46777888888887 5555554433345555556666554433
Q ss_pred cCCCCCccccceEeecccccccccccchhcccCCcEEeccCCCC
Q 044302 291 FPHVGGSMECLQELFLDETDIKEMPLSIEHLSGLILLTLKYCKN 334 (830)
Q Consensus 291 ~~~~~~~l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L~L~~~~~ 334 (830)
-+.....+..|+.+++.++.+..++..+..+..+..|++..++.
T Consensus 224 ~~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~ 267 (414)
T KOG0531|consen 224 EGLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRI 267 (414)
T ss_pred cCcccchhHHHHHHhcccCccccccccccccccccccchhhccc
Confidence 22111111137888888888887776667777777777776554
No 40
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.36 E-value=1.3e-06 Score=93.36 Aligned_cols=74 Identities=24% Similarity=0.467 Sum_probs=51.0
Q ss_pred cCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCC-cccCCCcccccCCCCc
Q 044302 388 IELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGT-ATRRPPCSIFHMKNLK 466 (830)
Q Consensus 388 ~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n-~i~~l~~~l~~l~~L~ 466 (830)
+..+++++.|++++| .++.+|. -.++|+.|.+++|..+..+|+.+ .++|+.|++++| .+..+|. +|+
T Consensus 48 ~~~~~~l~~L~Is~c-~L~sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP~------sLe 115 (426)
T PRK15386 48 IEEARASGRLYIKDC-DIESLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLPE------SVR 115 (426)
T ss_pred HHHhcCCCEEEeCCC-CCcccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccccccc------ccc
Confidence 445688899999988 5666662 13468999999888888887655 357888888877 5555553 456
Q ss_pred EEEcCCC
Q 044302 467 TLSFSGC 473 (830)
Q Consensus 467 ~L~L~~~ 473 (830)
.|++.++
T Consensus 116 ~L~L~~n 122 (426)
T PRK15386 116 SLEIKGS 122 (426)
T ss_pred eEEeCCC
Confidence 6666543
No 41
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.31 E-value=9.4e-08 Score=106.56 Aligned_cols=190 Identities=25% Similarity=0.282 Sum_probs=105.2
Q ss_pred cCcEEeecCCCCCCcCCcccCCCCCcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCC
Q 044302 347 CLRTLKLSGCSKLKKFPQIVGMEGLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGC 426 (830)
Q Consensus 347 ~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~ 426 (830)
.++.+.+..+...+....+..+.+|+.|++.+|.|..+...+..+++|++|+|++|.+....+ +..++.|+.|++++|
T Consensus 73 ~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N 150 (414)
T KOG0531|consen 73 SLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGN 150 (414)
T ss_pred hHHhhccchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccc--hhhccchhhheeccC
Confidence 333333444333333333455566666666666666665555666666666666665544332 333445666666666
Q ss_pred CCCCccCcccCCCCCccEEecCCCcccCCCcc-cccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCC
Q 044302 427 CKLENVPDTLGQVESLEELDISGTATRRPPCS-IFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLG 505 (830)
Q Consensus 427 ~~l~~~~~~l~~l~~L~~L~L~~n~i~~l~~~-l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~ 505 (830)
.+... ..+..+.+|+.+++++|.+..+... ...+.+|+.+.+.+|.+.. +..+..+..+..+++.+|.++
T Consensus 151 ~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~-------i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 151 LISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIRE-------IEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred cchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhc-------ccchHHHHHHHHhhcccccce
Confidence 54432 2233366677777777776655543 4566667777777666442 122233334444466666554
Q ss_pred CCccccccCCCCC--CCEEeCCCCCCcccCcccCCCCccCEeecccc
Q 044302 506 EGAILSDIGNLHS--LKALYLSENNFVTLPASISGLFNLEYLKLEDC 550 (830)
Q Consensus 506 ~~~~~~~l~~l~~--L~~L~L~~n~l~~lp~~l~~L~~L~~L~L~~c 550 (830)
....+..+.. |+.+++++|.+..++..+..+..+..|++.++
T Consensus 222 ---~~~~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n 265 (414)
T KOG0531|consen 222 ---KLEGLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSN 265 (414)
T ss_pred ---eccCcccchhHHHHHHhcccCccccccccccccccccccchhhc
Confidence 2222333333 67777777777766556666667777777665
No 42
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=1e-08 Score=101.41 Aligned_cols=156 Identities=22% Similarity=0.229 Sum_probs=87.1
Q ss_pred CCcEEEecCCccc--ccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccC--cccCCCCCccEE
Q 044302 370 GLSELYLDGTSIT--EVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVP--DTLGQVESLEEL 445 (830)
Q Consensus 370 ~L~~L~L~~~~i~--~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~--~~l~~l~~L~~L 445 (830)
.|+.|+|+...|+ .+...+..+.+|+.|.|.++.....+...+..-.+|+.|+|+.|+...... -.+.+++.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 3666677666665 344445677778888888877777777777777788888888877665433 234666777777
Q ss_pred ecCCCcccC--CCccccc-CCCCcEEEcCCCCCCCCCCccccCCC-CCCCCccCeecCCCCCCCCCccccccCCCCCCCE
Q 044302 446 DISGTATRR--PPCSIFH-MKNLKTLSFSGCNGPPSTASSLMLPS-LSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKA 521 (830)
Q Consensus 446 ~L~~n~i~~--l~~~l~~-l~~L~~L~L~~~~~~~~~~~~~~l~~-l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~ 521 (830)
+|+.|.... +...+.+ -++|+.|+|+||...-... .+.. ...+|+|.+|||++|..........+-.++-|++
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~s---h~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~ 342 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKS---HLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQH 342 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhh---HHHHHHHhCCceeeeccccccccCchHHHHHHhcchhee
Confidence 777766541 1111222 3566667776665221000 0111 2345556666666554322233333444555555
Q ss_pred EeCCCCC
Q 044302 522 LYLSENN 528 (830)
Q Consensus 522 L~L~~n~ 528 (830)
|.++.|.
T Consensus 343 lSlsRCY 349 (419)
T KOG2120|consen 343 LSLSRCY 349 (419)
T ss_pred eehhhhc
Confidence 5555543
No 43
>PLN03150 hypothetical protein; Provisional
Probab=98.27 E-value=1.6e-06 Score=101.19 Aligned_cols=110 Identities=28% Similarity=0.472 Sum_probs=83.5
Q ss_pred ccEEecCCCccc-CCCcccccCCCCcEEEcCCCCCCCCCCccccCC-CCCCCCccCeecCCCCCCCCCccccccCCCCCC
Q 044302 442 LEELDISGTATR-RPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLP-SLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSL 519 (830)
Q Consensus 442 L~~L~L~~n~i~-~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~-~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L 519 (830)
++.|+|++|.+. .+|..+..+++|+.|+|++|.+.. .+| .++.+++|+.|+|++|+++ +.+|..++.+++|
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g------~iP~~~~~l~~L~~LdLs~N~ls-g~iP~~l~~L~~L 492 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRG------NIPPSLGSITSLEVLDLSYNSFN-GSIPESLGQLTSL 492 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccC------cCChHHhCCCCCCEEECCCCCCC-CCCchHHhcCCCC
Confidence 677788888776 667777788888888888877543 233 3777888888888888886 6778888888899
Q ss_pred CEEeCCCCCCc-ccCcccCCC-CccCEeeccccccccccCC
Q 044302 520 KALYLSENNFV-TLPASISGL-FNLEYLKLEDCKRLQSLPQ 558 (830)
Q Consensus 520 ~~L~L~~n~l~-~lp~~l~~L-~~L~~L~L~~c~~l~~lp~ 558 (830)
+.|+|++|++. .+|..+..+ .++..+++.+|+.+...|.
T Consensus 493 ~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 493 RILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CEEECcCCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 99999988888 778777553 4677888888877665554
No 44
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.22 E-value=2.6e-08 Score=98.56 Aligned_cols=152 Identities=20% Similarity=0.172 Sum_probs=88.0
Q ss_pred CCceEEEccCCChh--hcccCCCCCCcccEEEccCCCCCCCC-CCCCCCCceeEEeeeCCccccccc--ccccCCCCccE
Q 044302 182 DKIVEFEMCYSRIE--ELWKGIKPLNTLKVMKLSHSENLIKT-PNFIEVPNLEVLDLEGCTRLREIH--SSLVRHNKLIL 256 (830)
Q Consensus 182 ~~L~~L~L~~n~i~--~l~~~~~~l~~L~~L~L~~~~~~~~~-~~~~~l~~L~~L~L~~~~~l~~~~--~~l~~l~~L~~ 256 (830)
.+|++|||++..|+ ++..-++.+.+|+.|.|.+++.-..+ ..+..-.+|+.|+++.|..++... --+.+++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 34888888888877 34445677788888888877533222 236677888888888887776433 33567788888
Q ss_pred EecCCCCCCccCCcccc---cCcccEEeccCcccccc---cCCCCCccccceEeeccccccc--ccccchhcccCCcEEe
Q 044302 257 LNLKGCTSLTTLPGEIF---MKSLKTLVLSGCLKLRK---FPHVGGSMECLQELFLDETDIK--EMPLSIEHLSGLILLT 328 (830)
Q Consensus 257 L~L~~c~~l~~lp~~~~---l~~L~~L~L~~~~~~~~---~~~~~~~l~~L~~L~L~~~~i~--~l~~~l~~l~~L~~L~ 328 (830)
|+++.|...+..-..+. -++|..|+|+|+...-. +......+++|.+|+|+.+..- .+...+..++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 88888765554322111 56777777777643211 1111234445555555443221 2223344444444444
Q ss_pred ccCCC
Q 044302 329 LKYCK 333 (830)
Q Consensus 329 L~~~~ 333 (830)
++.|.
T Consensus 345 lsRCY 349 (419)
T KOG2120|consen 345 LSRCY 349 (419)
T ss_pred hhhhc
Confidence 44443
No 45
>PLN03150 hypothetical protein; Provisional
Probab=98.14 E-value=3.9e-06 Score=98.06 Aligned_cols=105 Identities=29% Similarity=0.424 Sum_probs=63.7
Q ss_pred ccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCccc-CCCcccccCCCCcEEEcCC
Q 044302 394 IELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTATR-RPPCSIFHMKNLKTLSFSG 472 (830)
Q Consensus 394 L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i~-~l~~~l~~l~~L~~L~L~~ 472 (830)
++.|+|++|.....+|..+..+++|+.|+|++|.....+|..++.+++|+.|+|++|.+. .+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 556666666666666666666666666666666666666666666666666666666665 5566666666666666666
Q ss_pred CCCCCCCCccccCCC-CCC-CCccCeecCCCCCC
Q 044302 473 CNGPPSTASSLMLPS-LSG-LCSLTKLDLSDCGL 504 (830)
Q Consensus 473 ~~~~~~~~~~~~l~~-l~~-l~~L~~L~Ls~~~l 504 (830)
|..... +|. +.. +.++..+++.+|..
T Consensus 500 N~l~g~------iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 500 NSLSGR------VPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred Cccccc------CChHHhhccccCceEEecCCcc
Confidence 654322 221 222 23455666666653
No 46
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.11 E-value=2.9e-06 Score=66.24 Aligned_cols=57 Identities=32% Similarity=0.464 Sum_probs=27.7
Q ss_pred CCcEEEecCCcccccCc-ccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCC
Q 044302 370 GLSELYLDGTSITEVPS-SIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGC 426 (830)
Q Consensus 370 ~L~~L~L~~~~i~~l~~-~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~ 426 (830)
+|++|++++|.++.+|. .+..+++|+.|++++|......+..|.++++|++|++++|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 45555555555555553 3444555555555544444333344444444444444443
No 47
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.11 E-value=3.4e-06 Score=65.86 Aligned_cols=61 Identities=31% Similarity=0.391 Sum_probs=47.7
Q ss_pred CCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCCCcc
Q 044302 392 PGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISGTAT 452 (830)
Q Consensus 392 ~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~n~i 452 (830)
|+|+.|++++|......+..|.++++|++|++++|......+..|..+++|++|++++|.+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5678888888866655556788888888888888877777777888888888888888764
No 48
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.10 E-value=8e-08 Score=99.70 Aligned_cols=229 Identities=20% Similarity=0.290 Sum_probs=114.5
Q ss_pred CCCCCcccEEEccCCCCCCCCC--C-CCCCCceeEEeeeCCccccccc--ccccCCCCccEEecCCCCCCccCC--cccc
Q 044302 201 IKPLNTLKVMKLSHSENLIKTP--N-FIEVPNLEVLDLEGCTRLREIH--SSLVRHNKLILLNLKGCTSLTTLP--GEIF 273 (830)
Q Consensus 201 ~~~l~~L~~L~L~~~~~~~~~~--~-~~~l~~L~~L~L~~~~~l~~~~--~~l~~l~~L~~L~L~~c~~l~~lp--~~~~ 273 (830)
...++++.+|.+.+|..++... . -..+++|++|++..|..++... .-...+++|++|+++.|..+..-. ....
T Consensus 160 ~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~r 239 (483)
T KOG4341|consen 160 ASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQR 239 (483)
T ss_pred hhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCchhhcCcchHHhc
Confidence 4456777777777776443321 1 2257778888888776665422 123456778888888887776511 1111
Q ss_pred -cCcccEEeccCcccccc--cCCCCCccccceEeeccccc-ccccc--cchhcccCCcEEeccCCCCCCCCcc--ccccC
Q 044302 274 -MKSLKTLVLSGCLKLRK--FPHVGGSMECLQELFLDETD-IKEMP--LSIEHLSGLILLTLKYCKNLSSLPV--TISSL 345 (830)
Q Consensus 274 -l~~L~~L~L~~~~~~~~--~~~~~~~l~~L~~L~L~~~~-i~~l~--~~l~~l~~L~~L~L~~~~~~~~~~~--~l~~l 345 (830)
...++.+.+.||..... +-..-+.+.-+.++++..+. +++.. ..-..+..|+.|..++|...+..+- -..+.
T Consensus 240 G~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~ 319 (483)
T KOG4341|consen 240 GCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHC 319 (483)
T ss_pred cchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCC
Confidence 45566666666643221 11111222233344433331 22211 1123456677777777766543322 23456
Q ss_pred ccCcEEeecCCCCCCcCCc--c-cCCCCCcEEEecCCccc---ccCcccCCCCCccEEecCCccCcccc-----cccccC
Q 044302 346 KCLRTLKLSGCSKLKKFPQ--I-VGMEGLSELYLDGTSIT---EVPSSIELLPGIELLNLNDCKNLVRL-----PRSING 414 (830)
Q Consensus 346 ~~L~~L~L~~~~~~~~~~~--~-~~l~~L~~L~L~~~~i~---~l~~~~~~l~~L~~L~L~~~~~l~~l-----~~~~~~ 414 (830)
.+|+.|.+++|+....... + .+.+.|+.+++.++... .+-+.-.+++.|+.|.|++|...+.. ...-.+
T Consensus 320 ~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~ 399 (483)
T KOG4341|consen 320 HNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCS 399 (483)
T ss_pred CceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhcccc
Confidence 7777777777765443221 1 13455666665554433 12222345555555555555443332 122223
Q ss_pred CCCCCEEeccCCCCC
Q 044302 415 LKALKTLSLSGCCKL 429 (830)
Q Consensus 415 l~~L~~L~L~~~~~l 429 (830)
+..|..+.+++|+.+
T Consensus 400 ~~~l~~lEL~n~p~i 414 (483)
T KOG4341|consen 400 LEGLEVLELDNCPLI 414 (483)
T ss_pred ccccceeeecCCCCc
Confidence 444555555555443
No 49
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.05 E-value=1.6e-07 Score=103.45 Aligned_cols=128 Identities=28% Similarity=0.275 Sum_probs=64.0
Q ss_pred CCcEEEecCCcccccCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCCCccCcccCCCCCccEEecCC
Q 044302 370 GLSELYLDGTSITEVPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKLENVPDTLGQVESLEELDISG 449 (830)
Q Consensus 370 ~L~~L~L~~~~i~~l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~ 449 (830)
.|.+.+.+.|.+..+..++.-++.|+.|+|++|+..+.- .+..+ +.|++|||+.
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l------------------------~~LkhLDlsy 218 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD--NLRRL------------------------PKLKHLDLSY 218 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH--HHHhc------------------------cccccccccc
Confidence 344555555555555555555566666666655543322 33344 4455555555
Q ss_pred CcccCCCcccccCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCCCC
Q 044302 450 TATRRPPCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNF 529 (830)
Q Consensus 450 n~i~~l~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l 529 (830)
|.+..+|..-..--+|..|.+++|... .+-.+.+|.+|+.||+++|-+.+..-..-++.|..|+.|.|.||.+
T Consensus 219 N~L~~vp~l~~~gc~L~~L~lrnN~l~-------tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 219 NCLRHVPQLSMVGCKLQLLNLRNNALT-------TLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred chhccccccchhhhhheeeeecccHHH-------hhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 554444421111112555555555432 1223445566666666666554333333345555666666666655
Q ss_pred c
Q 044302 530 V 530 (830)
Q Consensus 530 ~ 530 (830)
.
T Consensus 292 ~ 292 (1096)
T KOG1859|consen 292 C 292 (1096)
T ss_pred c
Confidence 4
No 50
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.99 E-value=1.6e-06 Score=86.22 Aligned_cols=61 Identities=30% Similarity=0.445 Sum_probs=38.1
Q ss_pred cccCccCcEEeecCCCCCCcCCcc-cCCCCCcEEEecCCccc--ccCcccCCCCCccEEecCCc
Q 044302 342 ISSLKCLRTLKLSGCSKLKKFPQI-VGMEGLSELYLDGTSIT--EVPSSIELLPGIELLNLNDC 402 (830)
Q Consensus 342 l~~l~~L~~L~L~~~~~~~~~~~~-~~l~~L~~L~L~~~~i~--~l~~~~~~l~~L~~L~L~~~ 402 (830)
+.++|.|+.|+++.|+....+..+ ....+|++|-|.|+.+. ...+.+..+|.++.|.++.|
T Consensus 93 le~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N 156 (418)
T KOG2982|consen 93 LEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDN 156 (418)
T ss_pred HhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccc
Confidence 445566666666666555444444 34567778888777665 45555667777777777665
No 51
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=97.92 E-value=1.8e-07 Score=103.13 Aligned_cols=177 Identities=28% Similarity=0.324 Sum_probs=113.8
Q ss_pred hhhCCCCCceEEEcCcccC--CCccccccCcceEEEecC----------CCCCCCCCCCCCCceEEEccCCChhhcccCC
Q 044302 134 AFSLMTNLRLLKIGNVQLP--KGLEYLSNKLRLLVWHQY----------PLKSLPSNLQLDKIVEFEMCYSRIEELWKGI 201 (830)
Q Consensus 134 ~f~~l~~Lr~L~l~~~~l~--~~~~~l~~~Lr~L~l~~~----------~l~~lp~~~~l~~L~~L~L~~n~i~~l~~~~ 201 (830)
.+..++.||+|.+.++.+. .++..+-..|+.|.-++- ....+...+....|...+.++|.+..+-.++
T Consensus 104 ~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~mD~SL 183 (1096)
T KOG1859|consen 104 SIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVLMDESL 183 (1096)
T ss_pred eeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHhHHHHH
Confidence 3456778888888887765 344444444554443321 1233444445667777788888888777777
Q ss_pred CCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCCcccccccccccCCCCccEEecCCCCCCccCCcccccCcccEEe
Q 044302 202 KPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMKSLKTLV 281 (830)
Q Consensus 202 ~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~~L~~L~ 281 (830)
.-++.|+.|+|++|+ ......+..++.|++|||++| .+..+|.--..--+|+.|++++ +.++++-+.-.+.+|+.||
T Consensus 184 qll~ale~LnLshNk-~~~v~~Lr~l~~LkhLDlsyN-~L~~vp~l~~~gc~L~~L~lrn-N~l~tL~gie~LksL~~LD 260 (1096)
T KOG1859|consen 184 QLLPALESLNLSHNK-FTKVDNLRRLPKLKHLDLSYN-CLRHVPQLSMVGCKLQLLNLRN-NALTTLRGIENLKSLYGLD 260 (1096)
T ss_pred HHHHHhhhhccchhh-hhhhHHHHhcccccccccccc-hhccccccchhhhhheeeeecc-cHHHhhhhHHhhhhhhccc
Confidence 778888888888886 334447778888888888884 4555553322223488888887 6777776655578888888
Q ss_pred ccCccccccc-CCCCCccccceEeecccccccc
Q 044302 282 LSGCLKLRKF-PHVGGSMECLQELFLDETDIKE 313 (830)
Q Consensus 282 L~~~~~~~~~-~~~~~~l~~L~~L~L~~~~i~~ 313 (830)
++.|-+...- -..++.+..|+.|+|.+|.+-.
T Consensus 261 lsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 261 LSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 8876544321 1234566677777777776643
No 52
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.83 E-value=1.3e-05 Score=79.83 Aligned_cols=205 Identities=19% Similarity=0.174 Sum_probs=125.3
Q ss_pred CCCCcEEEecCCcccc---cCcccCCCCCccEEecCCccCcccccccccCCCCCCEEeccCCCCC-CccCcccCCCCCcc
Q 044302 368 MEGLSELYLDGTSITE---VPSSIELLPGIELLNLNDCKNLVRLPRSINGLKALKTLSLSGCCKL-ENVPDTLGQVESLE 443 (830)
Q Consensus 368 l~~L~~L~L~~~~i~~---l~~~~~~l~~L~~L~L~~~~~l~~l~~~~~~l~~L~~L~L~~~~~l-~~~~~~l~~l~~L~ 443 (830)
.+.++.++|.+|.|.. +...+.++|.|+.|+|+.|+....+...-..+.+|+.|-+.+.... +.....+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4567778888887773 4445677888888888877655433221123567777777765443 22334456667777
Q ss_pred EEecCCCcccCCC---ccccc-CCCCcEEEcCCCCCCCCCCccccCCC-CCCCCccCeecCCCCCCCCCccccccCCCCC
Q 044302 444 ELDISGTATRRPP---CSIFH-MKNLKTLSFSGCNGPPSTASSLMLPS-LSGLCSLTKLDLSDCGLGEGAILSDIGNLHS 518 (830)
Q Consensus 444 ~L~L~~n~i~~l~---~~l~~-l~~L~~L~L~~~~~~~~~~~~~~l~~-l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~ 518 (830)
+|+++.|+..++- ..+.. -+.+++|.+.+|....+.. .-. -.-+|++..+-+..|.+.+.........+|.
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~----~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~ 225 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLN----KNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPS 225 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHH----HHhHHhhcccchheeeecCcccchhhcccCCCCCc
Confidence 7777777544321 11111 2355555555554221100 000 1236788888888888766556667778888
Q ss_pred CCEEeCCCCCCcccC--cccCCCCccCEeeccccccccccCCCCCCcceeeccCCccccccc
Q 044302 519 LKALYLSENNFVTLP--ASISGLFNLEYLKLEDCKRLQSLPQLPPNVHNVRLNGCASLVTLL 578 (830)
Q Consensus 519 L~~L~L~~n~l~~lp--~~l~~L~~L~~L~L~~c~~l~~lp~lp~sL~~L~i~~C~~L~~~~ 578 (830)
+.-|+|+.++|.++. +.+..+++|..|.+.++|....+.. ..=+.|-|...+.++.+.
T Consensus 226 ~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~--~err~llIaRL~~v~vLN 285 (418)
T KOG2982|consen 226 LSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRG--GERRFLLIARLTKVQVLN 285 (418)
T ss_pred chhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccC--CcceEEEEeeccceEEec
Confidence 889999999888654 3577889999999999987766643 112334444555554443
No 53
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.69 E-value=3.2e-05 Score=55.34 Aligned_cols=41 Identities=34% Similarity=0.513 Sum_probs=25.3
Q ss_pred CCCCEEeCCCCCCcccCcccCCCCccCEeeccccccccccCC
Q 044302 517 HSLKALYLSENNFVTLPASISGLFNLEYLKLEDCKRLQSLPQ 558 (830)
Q Consensus 517 ~~L~~L~L~~n~l~~lp~~l~~L~~L~~L~L~~c~~l~~lp~ 558 (830)
++|++|++++|+|+.+|..+.+|++|++|++++|+ +++++.
T Consensus 1 ~~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~-i~~i~~ 41 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPELSNLPNLETLNLSNNP-ISDISP 41 (44)
T ss_dssp TT-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSC-CSBEGG
T ss_pred CcceEEEccCCCCcccCchHhCCCCCCEEEecCCC-CCCCcC
Confidence 35667777777777776666777777777777763 444443
No 54
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.51 E-value=1.2e-05 Score=79.10 Aligned_cols=94 Identities=20% Similarity=0.139 Sum_probs=46.3
Q ss_pred CCCCccEEecCCCcccCC-----CcccccCCCCcEEEcCCCCCCCCCCccccCCCC--CCCCccCeecCCCCCCCCCccc
Q 044302 438 QVESLEELDISGTATRRP-----PCSIFHMKNLKTLSFSGCNGPPSTASSLMLPSL--SGLCSLTKLDLSDCGLGEGAIL 510 (830)
Q Consensus 438 ~l~~L~~L~L~~n~i~~l-----~~~l~~l~~L~~L~L~~~~~~~~~~~~~~l~~l--~~l~~L~~L~Ls~~~l~~~~~~ 510 (830)
.+.+|+.|||..|-++.. ...+...+.|+.|.+..|-........ .+..| ...|+|+.|...+|.+..+.+.
T Consensus 212 y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~-v~~~f~e~~~p~l~~L~~~Yne~~~~~i~ 290 (388)
T COG5238 212 YSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKS-VLRRFNEKFVPNLMPLPGDYNERRGGIIL 290 (388)
T ss_pred HhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHH-HHHHhhhhcCCCccccccchhhhcCceee
Confidence 345555666655554422 112233455666666666543221110 01111 1245666666666655433332
Q ss_pred cc------cCCCCCCCEEeCCCCCCccc
Q 044302 511 SD------IGNLHSLKALYLSENNFVTL 532 (830)
Q Consensus 511 ~~------l~~l~~L~~L~L~~n~l~~l 532 (830)
.. -..+|-|..|.+.+|.|...
T Consensus 291 ~~~l~~~e~~~~p~L~~le~ngNr~~E~ 318 (388)
T COG5238 291 DISLNEFEQDAVPLLVDLERNGNRIKEL 318 (388)
T ss_pred eechhhhhhcccHHHHHHHHccCcchhH
Confidence 21 13467777778888877744
No 55
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.47 E-value=8.8e-05 Score=53.07 Aligned_cols=40 Identities=30% Similarity=0.483 Sum_probs=31.4
Q ss_pred CccCeecCCCCCCCCCccccccCCCCCCCEEeCCCCCCcccC
Q 044302 492 CSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFVTLP 533 (830)
Q Consensus 492 ~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~~lp 533 (830)
++|++|++++|++++ ++..+++|++|+.|++++|++++++
T Consensus 1 ~~L~~L~l~~N~i~~--l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQITD--LPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp TT-SEEEETSSS-SS--HGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred CcceEEEccCCCCcc--cCchHhCCCCCCEEEecCCCCCCCc
Confidence 468888888888864 6667899999999999999988766
No 56
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.30 E-value=7.7e-05 Score=73.55 Aligned_cols=87 Identities=22% Similarity=0.322 Sum_probs=47.4
Q ss_pred CCCCcEEEecCCccc-----ccCcccCCCCCccEEecCCccC----------cccccccccCCCCCCEEeccCCCCCCcc
Q 044302 368 MEGLSELYLDGTSIT-----EVPSSIELLPGIELLNLNDCKN----------LVRLPRSINGLKALKTLSLSGCCKLENV 432 (830)
Q Consensus 368 l~~L~~L~L~~~~i~-----~l~~~~~~l~~L~~L~L~~~~~----------l~~l~~~~~~l~~L~~L~L~~~~~l~~~ 432 (830)
+..++.++|+||.|. .+...+.+-.+|+..++++-.. +..+...+-+||.|+..++|+|......
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 344455555555544 2223344445555555544211 1112334556777777777777766555
Q ss_pred Ccc----cCCCCCccEEecCCCcccC
Q 044302 433 PDT----LGQVESLEELDISGTATRR 454 (830)
Q Consensus 433 ~~~----l~~l~~L~~L~L~~n~i~~ 454 (830)
|+. ++..+.|.+|.+++|.+..
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp 134 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGP 134 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCc
Confidence 543 3455677777777777653
No 57
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.27 E-value=0.00057 Score=64.88 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=24.4
Q ss_pred CcceEEEecCCCCCCCCCCCCCCceEEEccCCChhhcccCCC-CCCcccEEEccCCC
Q 044302 161 KLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSRIEELWKGIK-PLNTLKVMKLSHSE 216 (830)
Q Consensus 161 ~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~i~~l~~~~~-~l~~L~~L~L~~~~ 216 (830)
....+++++|.+..++.--.+++|..|.+.+|+|+.+-..+. -+++|+.|.|.+|.
T Consensus 43 ~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNs 99 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNS 99 (233)
T ss_pred ccceecccccchhhcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcc
Confidence 344444444444444333344444445555544444433222 23344444444443
No 58
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.20 E-value=0.00054 Score=65.05 Aligned_cols=103 Identities=22% Similarity=0.323 Sum_probs=57.9
Q ss_pred CCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCC-CCCceeEEeeeCCccccccc--ccccCCCCccE
Q 044302 180 QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFI-EVPNLEVLDLEGCTRLREIH--SSLVRHNKLIL 256 (830)
Q Consensus 180 ~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~-~l~~L~~L~L~~~~~l~~~~--~~l~~l~~L~~ 256 (830)
...+...+||++|.+..++ .+..++.|.+|.|.+|++...-|.+. .+++|+.|.|.+|. +..+. ..+..+++|++
T Consensus 40 ~~d~~d~iDLtdNdl~~l~-~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNs-i~~l~dl~pLa~~p~L~~ 117 (233)
T KOG1644|consen 40 TLDQFDAIDLTDNDLRKLD-NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNS-IQELGDLDPLASCPKLEY 117 (233)
T ss_pred cccccceecccccchhhcc-cCCCccccceEEecCCcceeeccchhhhccccceEEecCcc-hhhhhhcchhccCCccce
Confidence 3455666777777666654 55666677777777776555555544 34567777776643 22221 23555666777
Q ss_pred EecCCCCCCccCCc----ccc-cCcccEEeccCc
Q 044302 257 LNLKGCTSLTTLPG----EIF-MKSLKTLVLSGC 285 (830)
Q Consensus 257 L~L~~c~~l~~lp~----~~~-l~~L~~L~L~~~ 285 (830)
|.+-++ .++.... .+. +++|++||+++-
T Consensus 118 Ltll~N-pv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 118 LTLLGN-PVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred eeecCC-chhcccCceeEEEEecCcceEeehhhh
Confidence 766663 2322221 111 667777776653
No 59
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.10 E-value=1.7e-05 Score=70.14 Aligned_cols=57 Identities=11% Similarity=0.278 Sum_probs=31.4
Q ss_pred CcceEEEecCCCCCCCCCC--CCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCC
Q 044302 161 KLRLLVWHQYPLKSLPSNL--QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSEN 217 (830)
Q Consensus 161 ~Lr~L~l~~~~l~~lp~~~--~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~ 217 (830)
+|...++++|.++.+|..| ..+.++.|+|++|.|.++|..+..++.|+.|+++.|..
T Consensus 54 el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l 112 (177)
T KOG4579|consen 54 ELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPL 112 (177)
T ss_pred eEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCcc
Confidence 3444555666666555555 34455555555555555555555555555555555543
No 60
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.10 E-value=0.00021 Score=83.50 Aligned_cols=130 Identities=25% Similarity=0.287 Sum_probs=79.3
Q ss_pred CCccEEecCCCCCCc-cCCcccc--cCcccEEeccCcccc-cccCCCCCccccceEeecccccccccccchhcccCCcEE
Q 044302 252 NKLILLNLKGCTSLT-TLPGEIF--MKSLKTLVLSGCLKL-RKFPHVGGSMECLQELFLDETDIKEMPLSIEHLSGLILL 327 (830)
Q Consensus 252 ~~L~~L~L~~c~~l~-~lp~~~~--l~~L~~L~L~~~~~~-~~~~~~~~~l~~L~~L~L~~~~i~~l~~~l~~l~~L~~L 327 (830)
.+|++|+++|...+. .-|..++ +|+|+.|.+++-... ..+.....++++|..|++++++++.+ .+++.+++|+.|
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L 200 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVL 200 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHH
Confidence 456666665532221 1222233 777777777764332 22334456778888888888888877 677888888888
Q ss_pred eccCCCCCC-CCccccccCccCcEEeecCCCCCCcCC-------cccCCCCCcEEEecCCccc
Q 044302 328 TLKYCKNLS-SLPVTISSLKCLRTLKLSGCSKLKKFP-------QIVGMEGLSELYLDGTSIT 382 (830)
Q Consensus 328 ~L~~~~~~~-~~~~~l~~l~~L~~L~L~~~~~~~~~~-------~~~~l~~L~~L~L~~~~i~ 382 (830)
.+.+-.... ..-..+-.|++|+.|++|......... ....+|+|+.|+.+++.+.
T Consensus 201 ~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred hccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 887765544 223356678888888887755443220 1123667777777766655
No 61
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.91 E-value=0.0005 Score=80.41 Aligned_cols=154 Identities=25% Similarity=0.270 Sum_probs=104.4
Q ss_pred CCccEEecCCccCcc-ccccccc-CCCCCCEEeccCCCCC-CccCcccCCCCCccEEecCCCcccCCCcccccCCCCcEE
Q 044302 392 PGIELLNLNDCKNLV-RLPRSIN-GLKALKTLSLSGCCKL-ENVPDTLGQVESLEELDISGTATRRPPCSIFHMKNLKTL 468 (830)
Q Consensus 392 ~~L~~L~L~~~~~l~-~l~~~~~-~l~~L~~L~L~~~~~l-~~~~~~l~~l~~L~~L~L~~n~i~~l~~~l~~l~~L~~L 468 (830)
.+|++|++++..... ..|..++ .+|+|+.|.+++-... ..+.....++++|..||+++++++.+ .+++++++|+.|
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L 200 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVL 200 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHH
Confidence 589999998855432 2333333 5899999999985443 23445567889999999999999988 688899999999
Q ss_pred EcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCc-c----ccccCCCCCCCEEeCCCCCCc--ccCcccCCCCc
Q 044302 469 SFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGA-I----LSDIGNLHSLKALYLSENNFV--TLPASISGLFN 541 (830)
Q Consensus 469 ~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~-~----~~~l~~l~~L~~L~L~~n~l~--~lp~~l~~L~~ 541 (830)
.+.+-..... ..+..+-+|.+|+.||+|........ + .+.-..||+|+.||.+++.+. .+-..+..-++
T Consensus 201 ~mrnLe~e~~----~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~ 276 (699)
T KOG3665|consen 201 SMRNLEFESY----QDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPN 276 (699)
T ss_pred hccCCCCCch----hhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCcc
Confidence 9987553321 12233667899999999987654322 1 122344889999999988776 22223344556
Q ss_pred cCEeecccc
Q 044302 542 LEYLKLEDC 550 (830)
Q Consensus 542 L~~L~L~~c 550 (830)
|+.+.+-+|
T Consensus 277 L~~i~~~~~ 285 (699)
T KOG3665|consen 277 LQQIAALDC 285 (699)
T ss_pred Hhhhhhhhh
Confidence 666555544
No 62
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.83 E-value=0.00073 Score=67.02 Aligned_cols=107 Identities=26% Similarity=0.284 Sum_probs=69.0
Q ss_pred cCCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCC--CCCCCccccccCCCCCCCEEeCCCCCCcccC--ccc
Q 044302 461 HMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDC--GLGEGAILSDIGNLHSLKALYLSENNFVTLP--ASI 536 (830)
Q Consensus 461 ~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~--~l~~~~~~~~l~~l~~L~~L~L~~n~l~~lp--~~l 536 (830)
.+..|+.|++.++..++ +..+-.|++|+.|.++.| ++. ..+......+|+|++|++++|++.-+. ..+
T Consensus 41 ~~~~le~ls~~n~gltt-------~~~~P~Lp~LkkL~lsdn~~~~~-~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl 112 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTT-------LTNFPKLPKLKKLELSDNYRRVS-GGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPL 112 (260)
T ss_pred cccchhhhhhhccceee-------cccCCCcchhhhhcccCCccccc-ccceehhhhCCceeEEeecCCccccccccchh
Confidence 35556666666655432 333556778888889888 554 334444556699999999999877421 245
Q ss_pred CCCCccCEeeccccccccccC-------CCCCCcceeeccCCccccc
Q 044302 537 SGLFNLEYLKLEDCKRLQSLP-------QLPPNVHNVRLNGCASLVT 576 (830)
Q Consensus 537 ~~L~~L~~L~L~~c~~l~~lp-------~lp~sL~~L~i~~C~~L~~ 576 (830)
..+.+|..|++.+|+-.+ +- .+-++|+.|+-.++..=|.
T Consensus 113 ~~l~nL~~Ldl~n~~~~~-l~dyre~vf~ll~~L~~LD~~dv~~~Ea 158 (260)
T KOG2739|consen 113 KELENLKSLDLFNCSVTN-LDDYREKVFLLLPSLKYLDGCDVDGEEA 158 (260)
T ss_pred hhhcchhhhhcccCCccc-cccHHHHHHHHhhhhccccccccCCccc
Confidence 677888899999996544 21 2446777777666554433
No 63
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.67 E-value=0.00023 Score=81.48 Aligned_cols=236 Identities=27% Similarity=0.372 Sum_probs=106.8
Q ss_pred ccCCcEEeccCCCCCCC--CccccccCccCcEEeecCC-CCCCcCC-----cccCCCCCcEEEecCCc-cccc--CcccC
Q 044302 321 LSGLILLTLKYCKNLSS--LPVTISSLKCLRTLKLSGC-SKLKKFP-----QIVGMEGLSELYLDGTS-ITEV--PSSIE 389 (830)
Q Consensus 321 l~~L~~L~L~~~~~~~~--~~~~l~~l~~L~~L~L~~~-~~~~~~~-----~~~~l~~L~~L~L~~~~-i~~l--~~~~~ 389 (830)
.+.|+.|.+..|..... +-.....++.|+.|++++| ......+ ....+++|+.|+++.+. +++. .....
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 45555666665554444 3344555666666666652 2222111 12234556666666555 3321 11122
Q ss_pred CCCCccEEecCCccCcc--cccccccCCCCCCEEeccCCCCCCc--cCcccCCCCCccEEecCCCcccCCCcccccCCCC
Q 044302 390 LLPGIELLNLNDCKNLV--RLPRSINGLKALKTLSLSGCCKLEN--VPDTLGQVESLEELDISGTATRRPPCSIFHMKNL 465 (830)
Q Consensus 390 ~l~~L~~L~L~~~~~l~--~l~~~~~~l~~L~~L~L~~~~~l~~--~~~~l~~l~~L~~L~L~~n~i~~l~~~l~~l~~L 465 (830)
.+++|+.|.+.+|..++ .+-.....+++|++|++++|..... +.....++++|+.|.+..... ++.+
T Consensus 267 ~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~---------c~~l 337 (482)
T KOG1947|consen 267 RCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNG---------CPSL 337 (482)
T ss_pred hCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCC---------CccH
Confidence 36677777766666422 2223344566677777776665422 122223344444433322211 2333
Q ss_pred cEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCCCCcccCcccCCCCccCEe
Q 044302 466 KTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFVTLPASISGLFNLEYL 545 (830)
Q Consensus 466 ~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~~l~~L~~L~~L 545 (830)
+.+.+.++..... .....-....++.|+.+.+..+...+......+.+++.|. ..+.. .......|+.|
T Consensus 338 ~~~~l~~~~~~~~--d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~--------~~~~~~~l~~L 406 (482)
T KOG1947|consen 338 TDLSLSGLLTLTS--DDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLEL--------RLCRSDSLRVL 406 (482)
T ss_pred HHHHHHHhhccCc--hhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHH--------HhccCCccceE
Confidence 3333333221110 0001111455667777777777644322233444555552 11111 11222237888
Q ss_pred eccccccccccCC--C---CCCcceeeccCCccccc
Q 044302 546 KLEDCKRLQSLPQ--L---PPNVHNVRLNGCASLVT 576 (830)
Q Consensus 546 ~L~~c~~l~~lp~--l---p~sL~~L~i~~C~~L~~ 576 (830)
++..|...+.--- . -..+..+.+.+|+....
T Consensus 407 ~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~~~~ 442 (482)
T KOG1947|consen 407 NLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRVITL 442 (482)
T ss_pred ecccCccccccchHHHhhhhhccccCCccCcccccc
Confidence 8888765443210 1 23345555556655443
No 64
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=96.57 E-value=0.00015 Score=64.25 Aligned_cols=112 Identities=14% Similarity=0.161 Sum_probs=74.0
Q ss_pred cceEEEecCCCCCCCCCC----CCCCceEEEccCCChhhcccCC-CCCCcccEEEccCCCCCCCCCCCCCCCceeEEeee
Q 044302 162 LRLLVWHQYPLKSLPSNL----QLDKIVEFEMCYSRIEELWKGI-KPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLE 236 (830)
Q Consensus 162 Lr~L~l~~~~l~~lp~~~----~l~~L~~L~L~~n~i~~l~~~~-~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~ 236 (830)
+..++|++|++..++... ...+|...+|++|.++++|+.+ ..++.++.|+|++|.....+..+..++.|+.|+++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~ 108 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLR 108 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccc
Confidence 444555566555554432 5566777788888888777654 34557788888887655545567778888888888
Q ss_pred CCcccccccccccCCCCccEEecCCCCCCccCCcccccC
Q 044302 237 GCTRLREIHSSLVRHNKLILLNLKGCTSLTTLPGEIFMK 275 (830)
Q Consensus 237 ~~~~l~~~~~~l~~l~~L~~L~L~~c~~l~~lp~~~~l~ 275 (830)
.| .+...|..+..+.+|-.|+..+ +....+|.+.+.+
T Consensus 109 ~N-~l~~~p~vi~~L~~l~~Lds~~-na~~eid~dl~~s 145 (177)
T KOG4579|consen 109 FN-PLNAEPRVIAPLIKLDMLDSPE-NARAEIDVDLFYS 145 (177)
T ss_pred cC-ccccchHHHHHHHhHHHhcCCC-CccccCcHHHhcc
Confidence 74 4555666666677777777776 5666666655433
No 65
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.47 E-value=0.00028 Score=80.82 Aligned_cols=36 Identities=31% Similarity=0.523 Sum_probs=18.1
Q ss_pred CcEEEcCCCCCCCCCCccccCCCCCC-CCccCeecCCCCCC
Q 044302 465 LKTLSFSGCNGPPSTASSLMLPSLSG-LCSLTKLDLSDCGL 504 (830)
Q Consensus 465 L~~L~L~~~~~~~~~~~~~~l~~l~~-l~~L~~L~Ls~~~l 504 (830)
++.|++..|........ ..... ...++.+++.++..
T Consensus 403 l~~L~l~~~~~~t~~~l----~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 403 LRVLNLSDCRLVTDKGL----RCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred cceEecccCccccccch----HHHhhhhhccccCCccCccc
Confidence 66666666664332111 11111 55666777777654
No 66
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.52 E-value=0.00057 Score=67.83 Aligned_cols=84 Identities=25% Similarity=0.295 Sum_probs=49.8
Q ss_pred CCCCcEEEcCCCCCCCCCCccccCCCCCCCCccCeecCCCCCCCCCccccccCCCCCCCEEeCCCCCCcccCc--ccCCC
Q 044302 462 MKNLKTLSFSGCNGPPSTASSLMLPSLSGLCSLTKLDLSDCGLGEGAILSDIGNLHSLKALYLSENNFVTLPA--SISGL 539 (830)
Q Consensus 462 l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~L~~L~Ls~~~l~~~~~~~~l~~l~~L~~L~L~~n~l~~lp~--~l~~L 539 (830)
+.+.++|++.||.+.. +.....++.|+.|.||-|.|+ ....+..+++|+.|+|..|.|.++.. -++++
T Consensus 18 l~~vkKLNcwg~~L~D-------Isic~kMp~lEVLsLSvNkIs---sL~pl~rCtrLkElYLRkN~I~sldEL~YLknl 87 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDD-------ISICEKMPLLEVLSLSVNKIS---SLAPLQRCTRLKELYLRKNCIESLDELEYLKNL 87 (388)
T ss_pred HHHhhhhcccCCCccH-------HHHHHhcccceeEEeeccccc---cchhHHHHHHHHHHHHHhcccccHHHHHHHhcC
Confidence 3445556666655432 222345666666666666665 33445666677777777776665542 45677
Q ss_pred CccCEeeccccccccc
Q 044302 540 FNLEYLKLEDCKRLQS 555 (830)
Q Consensus 540 ~~L~~L~L~~c~~l~~ 555 (830)
++|+.|.|..||--..
T Consensus 88 psLr~LWL~ENPCc~~ 103 (388)
T KOG2123|consen 88 PSLRTLWLDENPCCGE 103 (388)
T ss_pred chhhhHhhccCCcccc
Confidence 7777777777765443
No 67
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.51 E-value=0.00057 Score=67.85 Aligned_cols=96 Identities=22% Similarity=0.222 Sum_probs=59.1
Q ss_pred CCCCceEEEcCcccCCC--ccccccCcceEEEecCCCCCCCCCCCCCCceEEEccCCChhhccc--CCCCCCcccEEEcc
Q 044302 138 MTNLRLLKIGNVQLPKG--LEYLSNKLRLLVWHQYPLKSLPSNLQLDKIVEFEMCYSRIEELWK--GIKPLNTLKVMKLS 213 (830)
Q Consensus 138 l~~Lr~L~l~~~~l~~~--~~~l~~~Lr~L~l~~~~l~~lp~~~~l~~L~~L~L~~n~i~~l~~--~~~~l~~L~~L~L~ 213 (830)
+.+.+.|++-++.|.+. ...+| .|++|.|+-|.++++..--.+.+|++|+|..|.|..+-+ -++++++|+.|-|.
T Consensus 18 l~~vkKLNcwg~~L~DIsic~kMp-~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDISICEKMP-LLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HHHhhhhcccCCCccHHHHHHhcc-cceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 44455555555555431 23333 666777777777776655577777777777777776543 45677777777777
Q ss_pred CCCCCCCCCC------CCCCCceeEEe
Q 044302 214 HSENLIKTPN------FIEVPNLEVLD 234 (830)
Q Consensus 214 ~~~~~~~~~~------~~~l~~L~~L~ 234 (830)
.|......+. +..+|||++||
T Consensus 97 ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 97 ENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred cCCcccccchhHHHHHHHHcccchhcc
Confidence 7765544331 44566666665
No 68
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=95.19 E-value=0.071 Score=48.43 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=11.2
Q ss_pred cChHhhhCCCCCceEEEcC
Q 044302 130 LSAKAFSLMTNLRLLKIGN 148 (830)
Q Consensus 130 ~~~~~f~~l~~Lr~L~l~~ 148 (830)
++..+|.++++|+.+.+..
T Consensus 3 i~~~~F~~~~~l~~i~~~~ 21 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN 21 (129)
T ss_dssp E-TTTTTT-TT--EEEETS
T ss_pred ECHHHHhCCCCCCEEEECC
Confidence 4567888888888888764
No 69
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=95.08 E-value=0.01 Score=59.07 Aligned_cols=63 Identities=24% Similarity=0.259 Sum_probs=34.0
Q ss_pred cCcccEEeccCc--ccccccCCCCCccccceEeeccccccccccc--chhcccCCcEEeccCCCCCC
Q 044302 274 MKSLKTLVLSGC--LKLRKFPHVGGSMECLQELFLDETDIKEMPL--SIEHLSGLILLTLKYCKNLS 336 (830)
Q Consensus 274 l~~L~~L~L~~~--~~~~~~~~~~~~l~~L~~L~L~~~~i~~l~~--~l~~l~~L~~L~L~~~~~~~ 336 (830)
+++|+.|.++.| .....++.....+++|++|++++|++..+.. .+..+.+|..|++.+|....
T Consensus 64 Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 64 LPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred cchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCCccc
Confidence 455555555555 3444444444455667777777776664221 23445555566666655443
No 70
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=94.52 E-value=0.15 Score=46.25 Aligned_cols=13 Identities=8% Similarity=0.207 Sum_probs=4.3
Q ss_pred cccCccCcEEeec
Q 044302 342 ISSLKCLRTLKLS 354 (830)
Q Consensus 342 l~~l~~L~~L~L~ 354 (830)
|..+++|+.+.+.
T Consensus 8 F~~~~~l~~i~~~ 20 (129)
T PF13306_consen 8 FYNCSNLESITFP 20 (129)
T ss_dssp TTT-TT--EEEET
T ss_pred HhCCCCCCEEEEC
Confidence 3344444444443
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.20 E-value=0.018 Score=34.19 Aligned_cols=20 Identities=45% Similarity=0.642 Sum_probs=11.7
Q ss_pred CCCEEeCCCCCCcccCcccC
Q 044302 518 SLKALYLSENNFVTLPASIS 537 (830)
Q Consensus 518 ~L~~L~L~~n~l~~lp~~l~ 537 (830)
+|++|+|++|+++.+|.+++
T Consensus 1 ~L~~Ldls~n~l~~ip~~~~ 20 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSFS 20 (22)
T ss_dssp TESEEEETSSEESEEGTTTT
T ss_pred CccEEECCCCcCEeCChhhc
Confidence 35666666666666665543
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.79 E-value=0.035 Score=32.95 Aligned_cols=21 Identities=0% Similarity=0.085 Sum_probs=13.6
Q ss_pred CceEEEccCCChhhcccCCCC
Q 044302 183 KIVEFEMCYSRIEELWKGIKP 203 (830)
Q Consensus 183 ~L~~L~L~~n~i~~l~~~~~~ 203 (830)
+|++|++++|+|+.+|.++++
T Consensus 1 ~L~~Ldls~n~l~~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEESEEGTTTTT
T ss_pred CccEEECCCCcCEeCChhhcC
Confidence 466777777777777665543
No 73
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.37 E-value=0.073 Score=29.29 Aligned_cols=13 Identities=38% Similarity=0.595 Sum_probs=4.1
Q ss_pred CCEEeCCCCCCcc
Q 044302 519 LKALYLSENNFVT 531 (830)
Q Consensus 519 L~~L~L~~n~l~~ 531 (830)
|+.|+|++|++++
T Consensus 3 L~~L~l~~n~L~~ 15 (17)
T PF13504_consen 3 LRTLDLSNNRLTS 15 (17)
T ss_dssp -SEEEETSS--SS
T ss_pred cCEEECCCCCCCC
Confidence 3444444444333
No 74
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=91.14 E-value=0.13 Score=28.35 Aligned_cols=17 Identities=47% Similarity=0.630 Sum_probs=9.9
Q ss_pred CccCEeeccccccccccC
Q 044302 540 FNLEYLKLEDCKRLQSLP 557 (830)
Q Consensus 540 ~~L~~L~L~~c~~l~~lp 557 (830)
++|+.|+|++|+ ++++|
T Consensus 1 ~~L~~L~l~~n~-L~~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNR-LTSLP 17 (17)
T ss_dssp TT-SEEEETSS---SSE-
T ss_pred CccCEEECCCCC-CCCCc
Confidence 468888888886 66654
No 75
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=88.98 E-value=0.0021 Score=71.96 Aligned_cols=117 Identities=28% Similarity=0.321 Sum_probs=63.9
Q ss_pred ccCCCCCccEEecCCCccc-----CCCcccc----cCCCCcEEEcCCCCCCCCCCccccCCCCCCCCc-cCeecCCCCCC
Q 044302 435 TLGQVESLEELDISGTATR-----RPPCSIF----HMKNLKTLSFSGCNGPPSTASSLMLPSLSGLCS-LTKLDLSDCGL 504 (830)
Q Consensus 435 ~l~~l~~L~~L~L~~n~i~-----~l~~~l~----~l~~L~~L~L~~~~~~~~~~~~~~l~~l~~l~~-L~~L~Ls~~~l 504 (830)
.+.....+++++++.|.+. .++..+. ...++++|.+.+|......... ....+...++ +.+|++.+|.+
T Consensus 167 ~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~-l~~~l~~~~~~~~el~l~~n~l 245 (478)
T KOG4308|consen 167 VLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCAL-LDEVLASGESLLRELDLASNKL 245 (478)
T ss_pred HHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHH-HHHHHhccchhhHHHHHHhcCc
Confidence 3344555555666555543 1122222 3556777777776644221110 0111334444 66678888777
Q ss_pred CCCcc---ccccCCC-CCCCEEeCCCCCCc-----ccCcccCCCCccCEeecccccc
Q 044302 505 GEGAI---LSDIGNL-HSLKALYLSENNFV-----TLPASISGLFNLEYLKLEDCKR 552 (830)
Q Consensus 505 ~~~~~---~~~l~~l-~~L~~L~L~~n~l~-----~lp~~l~~L~~L~~L~L~~c~~ 552 (830)
.+... ...+..+ ..++.++++.|.|. .+...+..++++++|.+++|+.
T Consensus 246 ~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l 302 (478)
T KOG4308|consen 246 GDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPL 302 (478)
T ss_pred chHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcc
Confidence 64322 2223344 56678888888777 3455566777888888887764
No 76
>PF07725 LRR_3: Leucine Rich Repeat; InterPro: IPR011713 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This entry includes some LRRs that fail to be detected by the IPR001611 from INTERPRO model.
Probab=87.63 E-value=0.5 Score=27.13 Aligned_cols=19 Identities=47% Similarity=1.123 Sum_probs=17.0
Q ss_pred CceEEEccCCChhhcccCC
Q 044302 183 KIVEFEMCYSRIEELWKGI 201 (830)
Q Consensus 183 ~L~~L~L~~n~i~~l~~~~ 201 (830)
+|.+|+|.++++++||++.
T Consensus 1 ~LVeL~m~~S~lekLW~G~ 19 (20)
T PF07725_consen 1 NLVELNMPYSKLEKLWEGV 19 (20)
T ss_pred CcEEEECCCCChHHhcCcc
Confidence 5889999999999999875
No 77
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=86.73 E-value=0.044 Score=53.46 Aligned_cols=86 Identities=17% Similarity=0.177 Sum_probs=57.2
Q ss_pred cChHhhhCCCCCceEEEcCcccC---CCccccccCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCC
Q 044302 130 LSAKAFSLMTNLRLLKIGNVQLP---KGLEYLSNKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLN 205 (830)
Q Consensus 130 ~~~~~f~~l~~Lr~L~l~~~~l~---~~~~~l~~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~ 205 (830)
++...+...+..+.|+++.|++- ..+.-+ ..|..|+++.+.+.-+|.++ ....++.+++..|+.+++|.+++.++
T Consensus 33 ~~v~ei~~~kr~tvld~~s~r~vn~~~n~s~~-t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~ 111 (326)
T KOG0473|consen 33 IPVREIASFKRVTVLDLSSNRLVNLGKNFSIL-TRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEP 111 (326)
T ss_pred cchhhhhccceeeeehhhhhHHHhhccchHHH-HHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccC
Confidence 33445556677777777777653 233333 35666777777777777777 66677777777777777777777777
Q ss_pred cccEEEccCCC
Q 044302 206 TLKVMKLSHSE 216 (830)
Q Consensus 206 ~L~~L~L~~~~ 216 (830)
+++++++..+.
T Consensus 112 ~~k~~e~k~~~ 122 (326)
T KOG0473|consen 112 HPKKNEQKKTE 122 (326)
T ss_pred CcchhhhccCc
Confidence 77777776665
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=86.46 E-value=0.53 Score=29.10 Aligned_cols=21 Identities=38% Similarity=0.593 Sum_probs=15.2
Q ss_pred CCCCCEEeCCCCCCcccCccc
Q 044302 516 LHSLKALYLSENNFVTLPASI 536 (830)
Q Consensus 516 l~~L~~L~L~~n~l~~lp~~l 536 (830)
+++|+.|+|++|++..+|...
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHH
Confidence 457778888888888777543
No 79
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=86.46 E-value=0.53 Score=29.10 Aligned_cols=21 Identities=38% Similarity=0.593 Sum_probs=15.2
Q ss_pred CCCCCEEeCCCCCCcccCccc
Q 044302 516 LHSLKALYLSENNFVTLPASI 536 (830)
Q Consensus 516 l~~L~~L~L~~n~l~~lp~~l 536 (830)
+++|+.|+|++|++..+|...
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHH
Confidence 457778888888888777543
No 80
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=85.67 E-value=0.0073 Score=67.68 Aligned_cols=92 Identities=25% Similarity=0.269 Sum_probs=55.6
Q ss_pred CCCCccEEecCCCcccCC-----CcccccCCC-CcEEEcCCCCCCCCCCccccCCCCCCC-CccCeecCCCCCCCCCc--
Q 044302 438 QVESLEELDISGTATRRP-----PCSIFHMKN-LKTLSFSGCNGPPSTASSLMLPSLSGL-CSLTKLDLSDCGLGEGA-- 508 (830)
Q Consensus 438 ~l~~L~~L~L~~n~i~~l-----~~~l~~l~~-L~~L~L~~~~~~~~~~~~~~l~~l~~l-~~L~~L~Ls~~~l~~~~-- 508 (830)
...++++|++++|.++.. ...+...+. +..|++..|...+.. .....+.+..+ +.+++++++.|.+++..
T Consensus 202 ~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g-~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~ 280 (478)
T KOG4308|consen 202 PLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVG-VEKLLPCLSVLSETLRVLDLSRNSITEKGVR 280 (478)
T ss_pred ccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHH-HHHHHHHhcccchhhhhhhhhcCCccccchH
Confidence 456677777777766521 122334444 666777777654331 11122335555 67888888888887533
Q ss_pred -cccccCCCCCCCEEeCCCCCCc
Q 044302 509 -ILSDIGNLHSLKALYLSENNFV 530 (830)
Q Consensus 509 -~~~~l~~l~~L~~L~L~~n~l~ 530 (830)
+...+..++.++.|.+++|.+.
T Consensus 281 ~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 281 DLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHHhhhHHHHHhhcccCccc
Confidence 2334566778888888888776
No 81
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=85.55 E-value=0.022 Score=55.40 Aligned_cols=80 Identities=14% Similarity=0.133 Sum_probs=54.0
Q ss_pred cCcceEEEecCCCCCCCCCC-CCCCceEEEccCCChhhcccCCCCCCcccEEEccCCCCCCCCCCCCCCCceeEEeeeCC
Q 044302 160 NKLRLLVWHQYPLKSLPSNL-QLDKIVEFEMCYSRIEELWKGIKPLNTLKVMKLSHSENLIKTPNFIEVPNLEVLDLEGC 238 (830)
Q Consensus 160 ~~Lr~L~l~~~~l~~lp~~~-~l~~L~~L~L~~n~i~~l~~~~~~l~~L~~L~L~~~~~~~~~~~~~~l~~L~~L~L~~~ 238 (830)
...+.|+++.+++..+-..| .+..|+.|+++.|.|..+|+.++.+..++.+++..|.....+..+...++++++++.++
T Consensus 42 kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e~k~~ 121 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNEQKKT 121 (326)
T ss_pred ceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchhhhccC
Confidence 45667777777777776666 56677777777777777777777777777777666654444445666666666666664
Q ss_pred c
Q 044302 239 T 239 (830)
Q Consensus 239 ~ 239 (830)
.
T Consensus 122 ~ 122 (326)
T KOG0473|consen 122 E 122 (326)
T ss_pred c
Confidence 4
No 82
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.59 E-value=0.18 Score=48.47 Aligned_cols=36 Identities=19% Similarity=0.354 Sum_probs=21.2
Q ss_pred CCccEEecCCCccc-CCCcccccCCCCcEEEcCCCCC
Q 044302 440 ESLEELDISGTATR-RPPCSIFHMKNLKTLSFSGCNG 475 (830)
Q Consensus 440 ~~L~~L~L~~n~i~-~l~~~l~~l~~L~~L~L~~~~~ 475 (830)
..++.++-+++.|. +--..+..++.++.|.+.+|..
T Consensus 101 ~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~ 137 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKY 137 (221)
T ss_pred ceEEEEecCCchHHHHHHHHHhccchhhhheeccccc
Confidence 34666777766655 2223444566677777777663
No 83
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=79.79 E-value=1.4 Score=27.08 Aligned_cols=22 Identities=32% Similarity=0.481 Sum_probs=15.1
Q ss_pred CCCccEEecCCCcccCCCcccc
Q 044302 439 VESLEELDISGTATRRPPCSIF 460 (830)
Q Consensus 439 l~~L~~L~L~~n~i~~l~~~l~ 460 (830)
+++|+.|+|++|.+..+|...+
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 3567777777777777775543
No 84
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=79.79 E-value=1.4 Score=27.08 Aligned_cols=22 Identities=32% Similarity=0.481 Sum_probs=15.1
Q ss_pred CCCccEEecCCCcccCCCcccc
Q 044302 439 VESLEELDISGTATRRPPCSIF 460 (830)
Q Consensus 439 l~~L~~L~L~~n~i~~l~~~l~ 460 (830)
+++|+.|+|++|.+..+|...+
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 3567777777777777775543
No 85
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.99 E-value=0.5 Score=45.52 Aligned_cols=88 Identities=25% Similarity=0.308 Sum_probs=45.2
Q ss_pred CCCCCC-CCCCceEEEccCCChhhcc-cCCCCCCcccEEEccCCCCCCCC--CCCC-CCCceeEEeeeCCcccccc-ccc
Q 044302 174 SLPSNL-QLDKIVEFEMCYSRIEELW-KGIKPLNTLKVMKLSHSENLIKT--PNFI-EVPNLEVLDLEGCTRLREI-HSS 247 (830)
Q Consensus 174 ~lp~~~-~l~~L~~L~L~~n~i~~l~-~~~~~l~~L~~L~L~~~~~~~~~--~~~~-~l~~L~~L~L~~~~~l~~~-~~~ 247 (830)
++|-.. .-..++.+|-+++.|.... +.+.+++.++.|.+.+|.....- .-++ -.++|+.|++++|..+++- -..
T Consensus 92 ~lp~~~~~~~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~ 171 (221)
T KOG3864|consen 92 SLPGPNADNVKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLAC 171 (221)
T ss_pred cCCCCCCCcceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHH
Confidence 344332 4446777777777776431 23455566666666666543221 1111 3466666666666555432 123
Q ss_pred ccCCCCccEEecCC
Q 044302 248 LVRHNKLILLNLKG 261 (830)
Q Consensus 248 l~~l~~L~~L~L~~ 261 (830)
+..+++|+.|.+.+
T Consensus 172 L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 172 LLKLKNLRRLHLYD 185 (221)
T ss_pred HHHhhhhHHHHhcC
Confidence 44455555555544
No 86
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=74.11 E-value=2.2 Score=26.38 Aligned_cols=18 Identities=44% Similarity=0.656 Sum_probs=11.9
Q ss_pred CCCCEEeCCCCCCcccCc
Q 044302 517 HSLKALYLSENNFVTLPA 534 (830)
Q Consensus 517 ~~L~~L~L~~n~l~~lp~ 534 (830)
++|+.|++++|+++++|+
T Consensus 2 ~~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLTSLPE 19 (26)
T ss_pred cccceeecCCCccccCcc
Confidence 356677777777776664
No 87
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=70.73 E-value=2.6 Score=26.06 Aligned_cols=16 Identities=13% Similarity=0.258 Sum_probs=7.5
Q ss_pred CceEEEccCCChhhcc
Q 044302 183 KIVEFEMCYSRIEELW 198 (830)
Q Consensus 183 ~L~~L~L~~n~i~~l~ 198 (830)
+|+.|++++|+++.||
T Consensus 3 ~L~~L~vs~N~Lt~LP 18 (26)
T smart00364 3 SLKELNVSNNQLTSLP 18 (26)
T ss_pred ccceeecCCCccccCc
Confidence 3444444444444444
No 88
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=63.58 E-value=5.2 Score=24.64 Aligned_cols=15 Identities=33% Similarity=0.561 Sum_probs=9.1
Q ss_pred CccCEeecccccccc
Q 044302 540 FNLEYLKLEDCKRLQ 554 (830)
Q Consensus 540 ~~L~~L~L~~c~~l~ 554 (830)
++|++|+|++|+.+.
T Consensus 2 ~~L~~L~l~~C~~it 16 (26)
T smart00367 2 PNLRELDLSGCTNIT 16 (26)
T ss_pred CCCCEeCCCCCCCcC
Confidence 456666666666544
No 89
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=60.18 E-value=6 Score=24.56 Aligned_cols=16 Identities=13% Similarity=0.501 Sum_probs=11.2
Q ss_pred CCceEEEccCCChhhc
Q 044302 182 DKIVEFEMCYSRIEEL 197 (830)
Q Consensus 182 ~~L~~L~L~~n~i~~l 197 (830)
.+|++|++++|+|+++
T Consensus 2 ~~L~~L~L~~NkI~~I 17 (26)
T smart00365 2 TNLEELDLSQNKIKKI 17 (26)
T ss_pred CccCEEECCCCcccee
Confidence 4677777777777654
No 90
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=49.77 E-value=8.3 Score=23.08 Aligned_cols=13 Identities=38% Similarity=0.498 Sum_probs=5.3
Q ss_pred CCCCEEeCCCCCC
Q 044302 517 HSLKALYLSENNF 529 (830)
Q Consensus 517 ~~L~~L~L~~n~l 529 (830)
++|+.|+|++|.|
T Consensus 2 ~~L~~L~l~~n~i 14 (24)
T PF13516_consen 2 PNLETLDLSNNQI 14 (24)
T ss_dssp TT-SEEE-TSSBE
T ss_pred CCCCEEEccCCcC
Confidence 3445555555444
No 91
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=33.95 E-value=34 Score=21.51 Aligned_cols=14 Identities=43% Similarity=0.463 Sum_probs=8.5
Q ss_pred CCCCEEeCCCCCCc
Q 044302 517 HSLKALYLSENNFV 530 (830)
Q Consensus 517 ~~L~~L~L~~n~l~ 530 (830)
++|++|+|++|.+.
T Consensus 2 ~~L~~LdL~~N~i~ 15 (28)
T smart00368 2 PSLRELDLSNNKLG 15 (28)
T ss_pred CccCEEECCCCCCC
Confidence 35666666666654
No 92
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=27.05 E-value=2.5e+02 Score=31.27 Aligned_cols=20 Identities=20% Similarity=-0.059 Sum_probs=13.2
Q ss_pred CcccEEeccCcccccccCCC
Q 044302 275 KSLKTLVLSGCLKLRKFPHV 294 (830)
Q Consensus 275 ~~L~~L~L~~~~~~~~~~~~ 294 (830)
+.+++++++.+.+....|-.
T Consensus 165 pr~r~~dls~npi~dkvpih 184 (553)
T KOG4242|consen 165 PRARQHDLSPNPIGDKVPIH 184 (553)
T ss_pred chhhhhccCCCcccccCCcc
Confidence 45677788877776655543
No 93
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=22.26 E-value=35 Score=38.38 Aligned_cols=17 Identities=24% Similarity=0.546 Sum_probs=13.4
Q ss_pred CCCCccEEEEEEEEEEe
Q 044302 654 LHNVNKVVGYAVCCVFH 670 (830)
Q Consensus 654 ~~~~~~~~g~~~c~v~~ 670 (830)
|+...+..||.+--||.
T Consensus 440 ~~~~~~~l~ftv~G~f~ 456 (585)
T KOG3763|consen 440 WYQTGNLLGFTVAGVFR 456 (585)
T ss_pred eecccceEEEEEEEEee
Confidence 66567788999988884
No 94
>PF05725 FNIP: FNIP Repeat; InterPro: IPR008615 This repeat is approximately 22 residues long and is only found in Dictyostelium discoideum (Slime mould). It appears to be related to IPR001611 from INTERPRO. The alignment consists of two tandem repeats. It is termed the FNIP repeat after the pattern of conserved residues.
Probab=20.51 E-value=1.7e+02 Score=20.60 Aligned_cols=12 Identities=17% Similarity=0.451 Sum_probs=6.8
Q ss_pred ccccCcceEEEe
Q 044302 157 YLSNKLRLLVWH 168 (830)
Q Consensus 157 ~l~~~Lr~L~l~ 168 (830)
.+|.++++|.+.
T Consensus 9 ~iP~~l~~L~~g 20 (44)
T PF05725_consen 9 SIPSSLKSLIFG 20 (44)
T ss_pred eeCCCCeEEEEC
Confidence 345566666663
Done!