Query 044303
Match_columns 428
No_of_seqs 184 out of 1147
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 23:24:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044303.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044303hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.9E-73 6.4E-78 572.1 34.3 398 26-425 3-412 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.7E-66 9.4E-71 520.1 34.1 376 28-425 5-400 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 1.9E-60 6.4E-65 474.3 31.8 357 31-422 2-381 (381)
4 1j71_A Candidapepsin, aspartic 100.0 9.2E-54 3.1E-58 418.8 27.0 306 31-411 2-323 (334)
5 1tzs_A Cathepsin E; hydrolase, 100.0 1.8E-53 6.3E-58 419.4 27.6 311 30-411 11-341 (351)
6 2apr_A Rhizopuspepsin; hydrola 100.0 1.6E-53 5.6E-58 415.4 26.8 305 33-411 5-323 (325)
7 2x0b_A Renin; hydrolase-hormon 100.0 6E-54 2.1E-58 426.2 22.9 311 31-411 50-382 (383)
8 3psg_A Pepsinogen; hydrolase(a 100.0 7.1E-54 2.4E-58 424.7 23.1 309 31-411 45-369 (370)
9 1mpp_A Pepsin; hydrolase(acid 100.0 4E-53 1.4E-57 418.7 28.1 319 28-411 4-354 (361)
10 2qzx_A Candidapepsin-5; aspart 100.0 2.5E-53 8.4E-58 417.2 26.0 308 31-411 2-330 (342)
11 3cms_A Chymosin B; hydrolase, 100.0 1.4E-53 4.8E-58 415.6 23.0 307 31-411 3-322 (323)
12 1am5_A Pepsin, acid proteinase 100.0 4.3E-53 1.5E-57 412.5 25.8 306 32-411 2-323 (324)
13 1dpj_A Proteinase A; proteinas 100.0 9.4E-53 3.2E-57 410.9 26.4 307 32-411 3-328 (329)
14 3fv3_A SAPP1P-secreted asparti 100.0 2.8E-52 9.5E-57 409.3 26.8 306 31-420 2-331 (339)
15 4aa9_A Chymosin; hydrolase, as 100.0 4.9E-53 1.7E-57 411.4 21.1 304 34-411 3-319 (320)
16 3c9x_A Trichoderma reesei aspa 100.0 1.9E-52 6.5E-57 408.6 24.4 307 33-410 4-328 (329)
17 1htr_B Gastricsin; aspartyl pr 100.0 9.8E-53 3.4E-57 410.8 22.1 306 34-411 5-328 (329)
18 3pvk_A Candidapepsin-2; hydrol 100.0 2.5E-52 8.6E-57 410.1 24.7 311 32-420 3-333 (342)
19 3k1w_A Renin; protease, altern 100.0 1.6E-52 5.6E-57 411.2 22.6 314 29-412 5-340 (341)
20 1oew_A Endothiapepsin; hydrola 100.0 3.7E-52 1.3E-56 406.6 24.0 306 33-410 4-328 (329)
21 1miq_A Plasmepsin; aspartic pr 100.0 2.4E-52 8.2E-57 414.4 19.5 306 30-412 50-374 (375)
22 1ibq_A Aspergillopepsin; aspar 100.0 6.8E-51 2.3E-55 397.0 26.1 304 34-411 5-324 (325)
23 1qdm_A Prophytepsin; aspartic 100.0 6.1E-51 2.1E-55 415.2 25.8 327 31-411 41-477 (478)
24 1yg9_A Aspartic protease BLA G 100.0 3E-51 1E-55 400.3 19.5 304 32-411 7-328 (330)
25 2bju_A Plasmepsin II; aspartic 100.0 5.1E-51 1.7E-55 411.9 21.7 304 32-411 128-449 (453)
26 3qvc_A Histo-aspartic protease 100.0 4.3E-51 1.5E-55 412.9 19.7 306 31-413 126-450 (451)
27 1izd_A Aspartic proteinase; su 100.0 1E-50 3.6E-55 395.2 21.6 296 41-411 13-322 (323)
28 1wkr_A Polyporopepsin; hydrola 100.0 6.2E-50 2.1E-54 392.7 27.3 296 32-411 3-332 (340)
29 2ewy_A Beta-secretase 2; BACE2 100.0 1.6E-49 5.6E-54 395.9 27.2 322 35-422 6-359 (383)
30 1bxo_A Protein (penicillopepsi 100.0 2.3E-50 7.8E-55 392.9 20.4 295 41-411 13-322 (323)
31 2qp8_A Beta-secretase 1; BACE1 100.0 1.4E-49 4.9E-54 397.8 25.7 315 41-422 19-371 (395)
32 3vf3_A Beta-secretase 1; struc 100.0 5.6E-49 1.9E-53 394.5 27.1 318 42-423 27-379 (402)
33 3lpj_A Beta-secretase 1; alzhe 100.0 1.3E-48 4.5E-53 397.6 27.4 318 42-423 73-425 (455)
34 1b5f_A Protein (cardosin A); h 100.0 8.1E-39 2.8E-43 298.0 16.8 224 33-308 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.5E-35 5E-40 276.5 19.3 218 152-411 3-240 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 6.8E-19 2.3E-23 139.3 8.8 94 32-142 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 7.3E-16 2.5E-20 119.6 8.2 71 339-411 12-86 (87)
38 2i1a_A DNA damage-inducible pr 93.1 0.45 1.5E-05 39.4 8.9 26 385-410 110-135 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.7 0.32 1.1E-05 40.5 7.3 27 384-410 108-134 (148)
40 2i1a_A DNA damage-inducible pr 79.3 1.6 5.6E-05 35.9 4.0 30 41-72 23-52 (148)
41 1fmb_A EIAV protease; hydrolas 78.3 1.9 6.6E-05 33.4 3.8 26 45-72 9-34 (104)
42 2hs1_A HIV-1 protease; ultra-h 78.0 2.2 7.4E-05 32.8 3.9 27 45-73 9-35 (99)
43 3s8i_A Protein DDI1 homolog 1; 72.6 3 0.0001 34.5 3.8 30 41-72 21-50 (148)
44 3ec0_A Protease; HIV-2, inhibi 71.6 3.8 0.00013 31.4 3.8 27 45-73 9-35 (99)
45 3liy_A Protease; hydrolase, hy 71.2 3.6 0.00012 32.3 3.6 29 45-73 11-42 (116)
46 2hah_A Protease, retropepsin; 66.2 5 0.00017 31.7 3.5 25 45-72 15-39 (116)
47 3sqf_A Protease; folded monome 59.8 8.5 0.00029 30.2 3.8 27 45-73 10-36 (114)
48 3slz_A GAG-Pro-POL polyprotein 50.1 15 0.0005 29.7 3.8 30 42-73 20-49 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 43.2 20 0.00067 31.2 3.8 26 45-72 9-34 (203)
50 1lya_A Cathepsin D; lysosomal 41.5 24 0.00082 26.5 3.7 14 283-296 30-43 (97)
51 2rsp_A RSV protease; hydrolase 41.2 19 0.00065 28.7 3.1 22 51-74 27-48 (124)
52 1lya_B Cathepsin D; lysosomal 38.8 33 0.0011 30.1 4.8 40 32-74 91-137 (241)
53 3c9x_A Trichoderma reesei aspa 38.7 40 0.0014 31.3 5.6 43 29-73 181-229 (329)
54 1b5f_A Protein (cardosin A); h 38.6 36 0.0012 30.0 5.0 39 32-73 180-226 (239)
55 1fmb_A EIAV protease; hydrolas 38.2 28 0.00097 26.7 3.6 35 250-299 4-38 (104)
56 2hs1_A HIV-1 protease; ultra-h 37.2 24 0.00082 26.9 3.0 31 251-296 5-35 (99)
57 3ec0_A Protease; HIV-2, inhibi 35.5 26 0.00088 26.7 2.9 31 250-295 4-34 (99)
58 1ibq_A Aspergillopepsin; aspar 34.0 47 0.0016 30.7 5.2 43 29-73 176-224 (325)
59 2apr_A Rhizopuspepsin; hydrola 34.0 39 0.0013 31.3 4.7 43 30-74 182-229 (325)
60 1izd_A Aspartic proteinase; su 33.6 34 0.0012 31.7 4.1 40 32-73 180-224 (323)
61 1t6e_X Xylanase inhibitor; two 31.5 24 0.00082 33.7 2.7 44 30-73 191-245 (381)
62 3slz_A GAG-Pro-POL polyprotein 31.5 35 0.0012 27.4 3.3 27 255-296 23-49 (132)
63 2hah_A Protease, retropepsin; 31.4 36 0.0012 26.7 3.2 31 250-296 10-40 (116)
64 1oew_A Endothiapepsin; hydrola 31.3 47 0.0016 30.8 4.8 43 29-73 180-228 (329)
65 1bxo_A Protein (penicillopepsi 30.9 44 0.0015 30.9 4.4 43 29-73 177-223 (323)
66 2x0b_A Renin; hydrolase-hormon 26.3 63 0.0022 30.8 4.7 39 32-73 234-279 (383)
67 3pvk_A Candidapepsin-2; hydrol 26.1 1E+02 0.0035 28.4 6.1 41 30-73 182-228 (342)
68 3aup_A SBG7S, BG, basic 7S glo 25.3 70 0.0024 30.6 4.9 43 30-73 216-275 (403)
69 1htr_B Gastricsin; aspartyl pr 25.0 70 0.0024 29.5 4.7 40 32-74 181-228 (329)
70 3ka2_A [L-Ala51;Gly51']HIV-1 p 24.2 63 0.0021 28.0 3.8 26 45-72 113-138 (203)
71 1qdm_A Prophytepsin; aspartic 23.1 83 0.0028 31.0 5.0 39 32-73 223-269 (478)
72 1mpp_A Pepsin; hydrolase(acid 21.9 1E+02 0.0036 28.7 5.3 43 225-297 5-49 (361)
73 1tzs_A Cathepsin E; hydrolase, 21.8 76 0.0026 29.6 4.3 42 30-74 191-239 (351)
74 3k1w_A Renin; protease, altern 21.8 60 0.002 30.1 3.5 39 32-73 191-236 (341)
75 3cms_A Chymosin B; hydrolase, 21.5 80 0.0027 29.0 4.3 40 32-74 181-227 (323)
76 2qzx_A Candidapepsin-5; aspart 21.3 1.1E+02 0.0038 28.2 5.4 41 30-73 183-228 (342)
77 1yg9_A Aspartic protease BLA G 21.2 50 0.0017 30.7 2.8 40 32-74 185-230 (330)
78 1j71_A Candidapepsin, aspartic 20.1 88 0.003 28.9 4.3 40 32-74 185-229 (334)
79 1dpj_A Proteinase A; proteinas 20.1 74 0.0025 29.4 3.7 39 32-73 184-228 (329)
80 1am5_A Pepsin, acid proteinase 20.1 1.3E+02 0.0045 27.5 5.5 41 30-74 178-225 (324)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.9e-73 Score=572.12 Aligned_cols=398 Identities=56% Similarity=0.958 Sum_probs=329.8
Q ss_pred CCCCCceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCC
Q 044303 26 SFKPKALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCL 105 (428)
Q Consensus 26 ~~~~~~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~ 105 (428)
..+++.+.+||+.+..+++|+++|.||||||++.|+|||||+++||+|++|++|+||+.+.|.+..|..+..+.|. .|.
T Consensus 3 ~~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~-~c~ 81 (413)
T 3vla_A 3 SFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACG-DCF 81 (413)
T ss_dssp CCCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEE-CCS
T ss_pred CCCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCc-ccc
Confidence 3568889999999999999999999999999999999999999999999999999999999999999998888875 344
Q ss_pred C-CCCCCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCC
Q 044303 106 P-KGPGCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNK 184 (428)
Q Consensus 106 ~-~~~~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~ 184 (428)
. ++++|.++.|.|.+.|+.+++++.|++++|+|+|+..+|..++..++++++.|||++.+...+.....+||||||+++
T Consensus 82 s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~ 161 (413)
T 3vla_A 82 NGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTR 161 (413)
T ss_dssp SCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSS
T ss_pred cCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCC
Confidence 2 456788888999999944789999999999999986554333334678899999999864344556789999999999
Q ss_pred CchHHhhhhhhccCCCcEEEecCCC----CceEecCCCC---CCCCC-CC-ceEeeceeCCCCCCCCCcCCCCCcceEEE
Q 044303 185 VSLPSQLSAAAFKLDRKFSICLSSN----GAVFFGDVSF---PGIDP-KS-LIYTRLIRNPVSSAGASFEGESSAEYFIG 255 (428)
Q Consensus 185 ~S~~~ql~~~~~~~~~~FS~~L~~~----G~l~fGg~d~---~~~~~-g~-l~~tpl~~~~~~~~~~~~~~~~~~~y~v~ 255 (428)
+|++.||.. ++.++++||+||.+. |.|+||+.|. |+.++ ++ +.|+||+.++..+...+++.....+|.|+
T Consensus 162 lSl~sql~~-~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~ 240 (413)
T 3vla_A 162 IALPSQFAS-AFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240 (413)
T ss_dssp SSHHHHHHH-HHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred cchHHHHhh-hcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence 999999998 777789999999984 9999999972 22224 67 99999998753222222332334799999
Q ss_pred EeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhcc--CCCCCCCCCCCccceecCCCCC
Q 044303 256 VKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYS--NIPRVKPMAPFGACFNSSFIGS 333 (428)
Q Consensus 256 l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~C~~~~~~~~ 333 (428)
|++|+|+++.+.++...++.++.+.+++||||||++++||+++|++|+++|.+++. ++++.+....+..|++.+....
T Consensus 241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 320 (413)
T 3vla_A 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILS 320 (413)
T ss_dssp CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCE
T ss_pred EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCccc
Confidence 99999999999988877776655678999999999999999999999999998864 4544444445678998864322
Q ss_pred CCcCCCCCeEEEEEcCCceEEEEeccccEEEeCCCeEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeecCc
Q 044303 334 THVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSSLL 413 (428)
Q Consensus 334 ~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~~~ 413 (428)
...+..+|+|+|+|+|++++|+|++++|+++..++..|++++.......+.||||+.|||++|+|||++++|||||++++
T Consensus 321 ~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~ 400 (413)
T 3vla_A 321 TRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLL 400 (413)
T ss_dssp ETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEGG
T ss_pred cccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEecc
Confidence 12234799999999984589999999999987667899988876432236899999999999999999999999999999
Q ss_pred cccCCcccccCC
Q 044303 414 ARQTTCSNLTSN 425 (428)
Q Consensus 414 ~~~~~C~~~~~~ 425 (428)
.++++|+++.++
T Consensus 401 ~~~~~c~~~~~~ 412 (413)
T 3vla_A 401 GSRTTCANFNFT 412 (413)
T ss_dssp GGTCCGGGSBCC
T ss_pred cCcccccCcCCC
Confidence 999999998875
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.7e-66 Score=520.08 Aligned_cols=376 Identities=42% Similarity=0.751 Sum_probs=299.1
Q ss_pred CC-CceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCC
Q 044303 28 KP-KALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLP 106 (428)
Q Consensus 28 ~~-~~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~ 106 (428)
++ +.+.+||+.+..+.+|+++|.||||+|++.|+|||||+++||+|.+|++|+||+.+.|.+..|..+..+.|. .|..
T Consensus 5 ~~~~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~s~~C~~~~~~~c~-~c~~ 83 (403)
T 3aup_A 5 KPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCL-SCPA 83 (403)
T ss_dssp -CCCCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTTBHHHHHTTCCCEE-ECSS
T ss_pred CCCccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCCCccccCccccCcc-ccCC
Confidence 35 678999997777899999999999999999999999999999999999999999999999999988888776 4543
Q ss_pred C-CCCCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCC--CCcceecCceEEecccccccc-CcCCCcceEEecCC
Q 044303 107 K-GPGCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSK--PGQVVPVPNIIFACGATFLLE-GLASGFQGMAGLGR 182 (428)
Q Consensus 107 ~-~~~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~--~~~~~~~~~~~fG~~~~~~~~-~~~~~~~GIlGLg~ 182 (428)
+ +++|.++.|.|.+.|+.+++.+.|.+++|+|+|++.++.. +...++++++.|||++..... +.....+||||||+
T Consensus 84 ~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~ 163 (403)
T 3aup_A 84 ASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGH 163 (403)
T ss_dssp SCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSS
T ss_pred CCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCC
Confidence 2 3567778999999995478999999999999999854322 222368889999999986433 44457899999999
Q ss_pred CCCchHHhhhhhhccCCCcEEEecCCC----CceEecCCCCC------CCCC-CCceEeeceeCCCCCCCCCcCCCCCcc
Q 044303 183 NKVSLPSQLSAAAFKLDRKFSICLSSN----GAVFFGDVSFP------GIDP-KSLIYTRLIRNPVSSAGASFEGESSAE 251 (428)
Q Consensus 183 ~~~S~~~ql~~~~~~~~~~FS~~L~~~----G~l~fGg~d~~------~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~ 251 (428)
+.++++.|+++ +.+.+++||+||.+. |.|+||| |.. +.+. +++.|+||+.++ ..+
T Consensus 164 ~~~s~~~ql~~-~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~------------~~~ 229 (403)
T 3aup_A 164 APISLPNQLAS-HFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL------------QGE 229 (403)
T ss_dssp STTSHHHHHHH-HHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT------------TSC
T ss_pred CCcCHHHHHHh-hcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC------------CCc
Confidence 99999999976 666679999999983 9999999 621 1111 489999999864 369
Q ss_pred eEEEEeEEEEcCeEe-eccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCC
Q 044303 252 YFIGVKSILISGNVV-PLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSF 330 (428)
Q Consensus 252 y~v~l~~i~v~~~~l-~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~ 330 (428)
|.|.|++|+|+++.+ .++...+.+++.+.+++||||||++++||+++|++|.++|.+.+..++++.....+..|++...
T Consensus 230 y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~ 309 (403)
T 3aup_A 230 YNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK 309 (403)
T ss_dssp EEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGG
T ss_pred ceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCC
Confidence 999999999999998 7666555555555678999999999999999999999999877643333222223456876542
Q ss_pred CCCCCcCCCCCeEEEEEcCCc--eEEEEeccccEEEeCCCeEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEE
Q 044303 331 IGSTHVGAAAPEIHLYMPGTN--RMWKIFGAHSMVRVGKHAMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGF 408 (428)
Q Consensus 331 ~~~~~~~~~~P~i~~~f~g~~--~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGf 408 (428)
. ..+|+|+|+|+| + ++|+|++++|+++..++..|++++.......+.||||+.|||++|+|||++++||||
T Consensus 310 ~------~~~P~i~f~f~g-~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf 382 (403)
T 3aup_A 310 I------NAYPSVDLVMDK-PNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGF 382 (403)
T ss_dssp C------CCCCCEEEEESS-TTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEE
T ss_pred c------CcCCcEEEEEcC-CCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEE
Confidence 1 368999999998 4 699999999999876567999888765422458999999999999999999999999
Q ss_pred -eecCccccCCcccccCC
Q 044303 409 -SSSLLARQTTCSNLTSN 425 (428)
Q Consensus 409 -a~~~~~~~~~C~~~~~~ 425 (428)
|++++.+.++|++++.+
T Consensus 383 ~A~~~~~~~~~C~~~~~~ 400 (403)
T 3aup_A 383 STSSLHSHGVKCADLFNF 400 (403)
T ss_dssp ESSCGGGGTCCGGGSCCT
T ss_pred ecccccccCCCccccccc
Confidence 99999999999998875
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.9e-60 Score=474.29 Aligned_cols=357 Identities=31% Similarity=0.596 Sum_probs=275.2
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCC--
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKG-- 108 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~-- 108 (428)
.+.+||+++..+.+|+++|.|||| |+|||||+++||+|.+| .+|+.+.|.+..|..+..+.+. .|....
T Consensus 2 ~~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~---~~~~~~~C~s~~C~~~~~~~~~-sc~~~~~~ 72 (381)
T 1t6e_X 2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG---QPPAEIPCSSPTCLLANAYPAP-GCPAPSCG 72 (381)
T ss_dssp CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT---CCCCCCBTTSHHHHHHHSSCCT-TCCCCCC-
T ss_pred ceEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC---CCCCccCCCCchhccccCCCCC-CCCCccCC
Confidence 478999998889999999999998 99999999999999887 3578899999999865443322 232110
Q ss_pred CCCCCCCC-cceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCc----eEEeccccccccCcCCCcceEEecCCC
Q 044303 109 PGCNNNTC-THFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPN----IIFACGATFLLEGLASGFQGMAGLGRN 183 (428)
Q Consensus 109 ~~~~~~~c-~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~----~~fG~~~~~~~~~~~~~~~GIlGLg~~ 183 (428)
..|.+..| .|.+.|+ +|+.++|.+++|+|++++.++. +.+++ +.|||++.+...++....+||||||++
T Consensus 73 ~~~~~~~c~~f~i~Yg-dGs~~~G~l~~Dtv~ig~~~g~-----~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~ 146 (381)
T 1t6e_X 73 SDKHDKPCTAYPYNPV-SGACAAGSLSHTRFVANTTDGS-----KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANS 146 (381)
T ss_dssp -----CBCEECCBCTT-TCCBCCEEEEEEEEEEEEESSS-----SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSS
T ss_pred cCcCCCcccccccccc-CCceeeEEEEEEEEEeeccCCC-----ccccceeeeeEeecCcccccCCCCCCCceEEEeCCC
Confidence 01234568 5999996 8888899999999999874321 13344 367999876434444678999999999
Q ss_pred CCchHHhhhhhhccCCCcEEEecCCC--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEE
Q 044303 184 KVSLPSQLSAAAFKLDRKFSICLSSN--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSIL 260 (428)
Q Consensus 184 ~~S~~~ql~~~~~~~~~~FS~~L~~~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~ 260 (428)
++|++.||.. +++++++||+||.+. |+|+|||.|....++ +++.|+|++.++. ..+|.|.|++|+
T Consensus 147 ~~s~~~ql~~-~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~-----------~~~y~v~l~~i~ 214 (381)
T 1t6e_X 147 GLALPAQVAS-AQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGG-----------SPAHYISARSIV 214 (381)
T ss_dssp TTSHHHHHHH-HHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTT-----------CCSCEECEEEEE
T ss_pred cchhHHHHhh-hcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCC-----------CcceEEEEEEEE
Confidence 9999999998 776789999999985 999999987310024 8999999987541 245779999999
Q ss_pred EcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhcc-------CCCCC-CCCCCCccceecCCCC
Q 044303 261 ISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYS-------NIPRV-KPMAPFGACFNSSFIG 332 (428)
Q Consensus 261 v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~-------~~~~~-~~~~~~~~C~~~~~~~ 332 (428)
|+++.+.++...+. .+++||||||++++||+++|++|+++|.+++. ++++. .....+..|++.+...
T Consensus 215 vg~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~ 289 (381)
T 1t6e_X 215 VGDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLG 289 (381)
T ss_dssp ETTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCC
T ss_pred EcCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCc
Confidence 99998876654332 35799999999999999999999999988763 23333 2234567899875422
Q ss_pred CCCcCCCCCeEEEEEcCCceEEEEeccccEEEeCCCeEEEEEEeCCC-----CCCCceeechhhhcceEEEEeCCCCEEE
Q 044303 333 STHVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCLAFVDGGV-----NPTTSIVIGAYQLEDNLLQFDLAKSRLG 407 (428)
Q Consensus 333 ~~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~-----~~~~~~ILG~~flr~~yvvFD~e~~rIG 407 (428)
.......+|+|+|+|+| +++|+|++++|+++..++..|++++.... ...+.||||+.|||++|+|||++++|||
T Consensus 290 ~~~~~~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riG 368 (381)
T 1t6e_X 290 NNLGGYAVPNVQLGLDG-GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLG 368 (381)
T ss_dssp EETTEECCCCEEEEETT-SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEE
T ss_pred ccccCCcCCeEEEEECC-CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEE
Confidence 11112378999999986 59999999999998766789999887653 1135799999999999999999999999
Q ss_pred EeecCccccCCcccc
Q 044303 408 FSSSLLARQTTCSNL 422 (428)
Q Consensus 408 fa~~~~~~~~~C~~~ 422 (428)
||++++ .++|+++
T Consensus 369 fA~~~~--~~~cs~~ 381 (381)
T 1t6e_X 369 FSRLPH--FTGCGGL 381 (381)
T ss_dssp EEECCT--TCCSCC-
T ss_pred EecccC--CCCCCCC
Confidence 999988 7899975
No 4
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=9.2e-54 Score=418.84 Aligned_cols=306 Identities=17% Similarity=0.208 Sum_probs=243.4
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCC--CCCCCCCcccccCCCcccCCCCCCCccCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCE--QGFVSSSYKPARCGSAQCKIAGSESCVESCLPKG 108 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~--~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~ 108 (428)
.+.+||.+ .+.+|+++|.||||+|++.|+|||||+++||+|. +|..... .+.+..|..+..+++. .+
T Consensus 2 ~~~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~-----~S 70 (334)
T 1j71_A 2 DVPTTLIN--EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYS----GQTNNFCKQEGTFDPS-----SS 70 (334)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST----TCCTTGGGSSCCBCGG-----GC
T ss_pred ceeEEEec--CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccc----ccccccccCCCcCCcc-----cC
Confidence 47899998 4789999999999999999999999999999865 4521100 1223467665555543 22
Q ss_pred CCCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCCC---
Q 044303 109 PGCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNKV--- 185 (428)
Q Consensus 109 ~~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~~--- 185 (428)
+++....|.|.+.|+ +|+.+.|.+++|+|++++. +++++.|||++.. ...+||||||++..
T Consensus 71 sT~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~------~~~~GilGLg~~~~~~~ 134 (334)
T 1j71_A 71 SSAQNLNQDFSIEYG-DLTSSQGSFYKDTVGFGGI---------SIKNQQFADVTTT------SVDQGIMGIGFTADEAG 134 (334)
T ss_dssp TTCEEEEEEEEEEBT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEE------SSSSCEEECSCGGGSST
T ss_pred CCcccCCCceEEEEC-CCCEEEEEEEEEEEEECCE---------EEccEEEEEEEec------CCCccEEEEcCCcccCc
Confidence 334456799999996 8888999999999999875 7889999999876 24799999999754
Q ss_pred -----chHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEE
Q 044303 186 -----SLPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFI 254 (428)
Q Consensus 186 -----S~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v 254 (428)
+++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+... .+|.|
T Consensus 135 ~~~~~~~~~~L~~-qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~--------------~~~~v 197 (334)
T 1j71_A 135 YNLYDNVPVTLKK-QGIINKNAYSLYLNSEDASTGKIIFGGVDN--AKYTGTLTALPVTSS--------------VELRV 197 (334)
T ss_dssp TCCCCCHHHHHHH-TTSCSSSEEEEECCCTTCSEEEEEETEEET--TSEEEEEEEEECCCS--------------SSCEE
T ss_pred cccCCcHHHHHHH-CCCCCccEEEEEeCCCCCCCeEEEEeeech--HHccCceEEEEccCC--------------CeEEE
Confidence 68889998 8777 68999999863 9999999983 245 89999999753 58999
Q ss_pred EEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCC
Q 044303 255 GVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGST 334 (428)
Q Consensus 255 ~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 334 (428)
.+++|+|+++.+..+ ..+||||||++++||+++|++|.+++.+... .......+.+|+
T Consensus 198 ~l~~i~v~g~~~~~~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C~-------- 255 (334)
T 1j71_A 198 HLGSINFDGTSVSTN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSCD-------- 255 (334)
T ss_dssp EEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSSC--------
T ss_pred EEeEEEECCEeccCC-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcCC--------
Confidence 999999999887532 3589999999999999999999999976542 111111114675
Q ss_pred CcCCCCCeEEEEEcCCceEEEEeccccEEEeCCCeEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 335 HVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 335 ~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
.+|.|+|+|++ +++++||+++|+++..++..|+..+... +.||||+.|||++|+|||++++|||||+.
T Consensus 256 ----~~p~i~f~f~~-g~~~~i~~~~y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (334)
T 1j71_A 256 ----LSGDAVFNFDQ-GVKITVPLSELILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQV 323 (334)
T ss_dssp ----CCSEEEEEEST-TCEEEEEGGGGEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ----CCCceEEEEcC-CcEEEECHHHheeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEec
Confidence 26899999965 4999999999999876555698655433 25899999999999999999999999984
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-53 Score=419.44 Aligned_cols=311 Identities=17% Similarity=0.198 Sum_probs=243.6
Q ss_pred CceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCC
Q 044303 30 KALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGP 109 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~ 109 (428)
+.+.+||.+ ..+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..+++. .++
T Consensus 11 ~~~~~~l~n-~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~-----~Ss 73 (351)
T 1tzs_A 11 QSAKEPLIN-YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-----------TSPACKTHSRFQPS-----QSS 73 (351)
T ss_dssp ---CCTTGG-GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSGGGTTSCCBCGG-----GCT
T ss_pred Cccceecee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC-----------CccccCCCCcCCcc-----cCc
Confidence 345678875 3578999999999999999999999999999999755 44567666555543 233
Q ss_pred CCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc--
Q 044303 110 GCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS-- 186 (428)
Q Consensus 110 ~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S-- 186 (428)
++....|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++......+ ....+||||||++.++
T Consensus 74 T~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 142 (351)
T 1tzs_A 74 TYSQPGQSFSIQYG-TGS-LSGIIGADQVSVEGL---------TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVG 142 (351)
T ss_dssp TCBCCSCEEEEESS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGG
T ss_pred ceEECCCEEEEEeC-CCC-eEEEEEEeEEEECCe---------EECCeEEEEEEeccccccccCCCceEEecCCcccccc
Confidence 44567899999996 654 899999999999875 788999999987632222 3467999999998654
Q ss_pred ----hHHhhhhhhccC-CCcEEEecCCC------CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEE
Q 044303 187 ----LPSQLSAAAFKL-DRKFSICLSSN------GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFI 254 (428)
Q Consensus 187 ----~~~ql~~~~~~~-~~~FS~~L~~~------G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v 254 (428)
+..+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|
T Consensus 143 ~~~~~~~~l~~-qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v 205 (351)
T 1tzs_A 143 GVTPVFDNMMA-QNLVDLPMFSVYMSSNPEGGAGSELIFGGYDH--SHFSGSLNWVPVTK--------------QAYWQI 205 (351)
T ss_dssp GCCCHHHHHHH-TTCCSSSEEEEECCCCC--CTTCEEEETSCCG--GGBCSCCEEEECSE--------------ETTEEE
T ss_pred CCCcHHHHHHH-CCCCCCCEEEEEEcCCCCCCCCCEEEECCCCH--HHcCCceEEEecCC--------------CceEEE
Confidence 5667887 7666 68999999875 9999999983 234 8999999975 368999
Q ss_pred EEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCC
Q 044303 255 GVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGST 334 (428)
Q Consensus 255 ~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 334 (428)
.|++|+|+++.+... ....+||||||++++||+++|++|.+++.+... . .....+|+..
T Consensus 206 ~l~~i~v~~~~~~~~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~-g~~~~~C~~~------ 264 (351)
T 1tzs_A 206 ALDNIQVGGTVMFCS---------EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV-----D-GEYAVECANL------ 264 (351)
T ss_dssp EEEEEEETTEEEECT---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S-SSEEECGGGG------
T ss_pred EeCEEEECCceEEcC---------CCceEEeccCCcceeCCHHHHHHHHHHhCCccc-----C-CeEEEeCCCC------
Confidence 999999999875421 235799999999999999999999999865431 1 1223468765
Q ss_pred CcCCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEE-EEEeCCC--CCCCceeechhhhcceEEEEeCCCCEEEEe
Q 044303 335 HVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCL-AFVDGGV--NPTTSIVIGAYQLEDNLLQFDLAKSRLGFS 409 (428)
Q Consensus 335 ~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGfa 409 (428)
..+|+|+|+|+| ++++|++++|+++... +..|+ ++..... ...+.||||+.|||++|+|||++++|||||
T Consensus 265 ---~~~P~i~f~f~g--~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA 339 (351)
T 1tzs_A 265 ---NVMPDVTFTING--VPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLA 339 (351)
T ss_dssp ---GGSCCEEEEETT--EEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEE
T ss_pred ---ccCCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEE
Confidence 368999999976 9999999999987642 35898 5665432 124689999999999999999999999999
Q ss_pred ec
Q 044303 410 SS 411 (428)
Q Consensus 410 ~~ 411 (428)
+.
T Consensus 340 ~~ 341 (351)
T 1tzs_A 340 PA 341 (351)
T ss_dssp EB
T ss_pred EC
Confidence 84
No 6
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.6e-53 Score=415.45 Aligned_cols=305 Identities=16% Similarity=0.148 Sum_probs=238.7
Q ss_pred EEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCC
Q 044303 33 VVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCN 112 (428)
Q Consensus 33 ~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~ 112 (428)
.+|+..+..+.+|+++|.||||+|++.|+|||||+++||+|.+|. .| |..+..+++. .++++.
T Consensus 5 ~v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--------~c----~~~~~~y~~~-----~SsT~~ 67 (325)
T 2apr_A 5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--------NC----GSGQTKYDPN-----QSSTYQ 67 (325)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--------SC----CTTSCCBCGG-----GCTTCE
T ss_pred ceeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--------hH----hcCCCCCCcc-----cCCCee
Confidence 345555557899999999999999999999999999999998772 23 4444444443 122334
Q ss_pred CCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCCC-------
Q 044303 113 NNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNKV------- 185 (428)
Q Consensus 113 ~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~~------- 185 (428)
...|.|.+.|+ +++.+.|.+++|+|++++. +++++.|||++...........+||||||++..
T Consensus 68 ~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~ 137 (325)
T 2apr_A 68 ADGRTWSISYG-DGSSASGILAKDNVNLGGL---------LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVK 137 (325)
T ss_dssp EEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCC
T ss_pred eCCCEEEEEEC-CCCCEEEEEEEEEEEECCE---------EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCC
Confidence 46799999996 8888999999999999875 788999999987532222234899999998764
Q ss_pred chHHhhhhhhccC-CCcEEEecCCC-----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeE
Q 044303 186 SLPSQLSAAAFKL-DRKFSICLSSN-----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKS 258 (428)
Q Consensus 186 S~~~ql~~~~~~~-~~~FS~~L~~~-----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~ 258 (428)
+++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+... ..+|.|.+++
T Consensus 138 ~~~~~l~~-qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~~~v~l~~ 201 (325)
T 2apr_A 138 TPMDNLIS-QGLISRPIFGVYLGKAKNGGGGEYIFGGYDS--TKFKGSLTTVPIDNS-------------RGWWGITVDR 201 (325)
T ss_dssp CHHHHHHH-TTSCSSSEEEEEECCGGGTCCEEEEETCCCG--GGBCSCCEEEECBCT-------------TSSCEEEECE
T ss_pred CHHHHHHh-cCCCCCceEEEEecCCCCCCCCEEEEccCCc--hhccCceEEEEccCC-------------CCEEEEEEeE
Confidence 36778888 7766 78999999542 9999999983 234 89999999743 4689999999
Q ss_pred EEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCC
Q 044303 259 ILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGA 338 (428)
Q Consensus 259 i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 338 (428)
|+|+++ +. . ....+||||||++++||+++|+++++++.+.+... .....+|+. .
T Consensus 202 i~vg~~-~~--~--------~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-----g~~~~~C~~----------~ 255 (325)
T 2apr_A 202 ATVGTS-TV--A--------SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-----GTYTISCDT----------S 255 (325)
T ss_dssp EEETTE-EE--E--------CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-----SCEEECSCG----------G
T ss_pred EEECCE-ec--C--------CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-----CeEEEECCC----------C
Confidence 999993 22 1 13579999999999999999999999997664311 112235763 1
Q ss_pred CCCeEEEEEcCCceEEEEeccccEEEeCCCeEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 339 AAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 339 ~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
.+|+|+|+|+| .+++||+++|++... +..|++.+.... .+.||||+.|||++|+|||++++|||||+.
T Consensus 256 ~~p~i~f~f~g--~~~~ip~~~~~~~~~-~~~C~~~i~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 256 AFKPLVFSING--ASFQVSPDSLVFEEF-QGQCIAGFGYGN--WGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp GCCCEEEEETT--EEEEECGGGGEEEEE-TTEEEESEEEES--SSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CCCcEEEEECC--EEEEECHHHEEEcCC-CCeEEEEEEcCC--CCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 48999999998 599999999998654 578997544322 357999999999999999999999999984
No 7
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=6e-54 Score=426.19 Aligned_cols=311 Identities=17% Similarity=0.235 Sum_probs=245.0
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPG 110 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~ 110 (428)
...+||.+ ..+.+|+++|.||||||+|.|+|||||+++||+|..|.. .+..|..+..+++. .+++
T Consensus 50 ~~~~~l~n-~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~---------~~~~C~~~~~y~~~-----~SsT 114 (383)
T 2x0b_A 50 TSSVILTN-YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR---------LYTACVYHKLFDAS-----DSSS 114 (383)
T ss_dssp -CEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT---------TSHHHHTSCCBCGG-----GCTT
T ss_pred cceEeeee-cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCC---------CcccccCCCCCCCC-----CCCc
Confidence 45689987 357899999999999999999999999999999986621 12457666555544 2334
Q ss_pred CCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccC-cCCCcceEEecCCCCCc---
Q 044303 111 CNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEG-LASGFQGMAGLGRNKVS--- 186 (428)
Q Consensus 111 ~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~-~~~~~~GIlGLg~~~~S--- 186 (428)
+....|.|.+.|+ +| +++|++++|+|+|++. +++ +.|||++.+.... .....|||||||++.++
T Consensus 115 ~~~~~~~~~i~Yg-~G-s~~G~~~~Dtv~ig~~---------~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~ 182 (383)
T 2x0b_A 115 YKHNGTELTLRYS-TG-TVSGFLSQDIITVGGI---------TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGR 182 (383)
T ss_dssp CEEEEEEEEEECS-SC-EEEEEEEEEEEEETTE---------EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGG
T ss_pred EEECCcEEEEEcC-Cc-cEEEEEEeeEEEEcCc---------eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCC
Confidence 4567899999995 55 5899999999999875 778 9999998863221 23468999999998765
Q ss_pred ---hHHhhhhhhccC-CCcEEEecCCC--------CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceE
Q 044303 187 ---LPSQLSAAAFKL-DRKFSICLSSN--------GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYF 253 (428)
Q Consensus 187 ---~~~ql~~~~~~~-~~~FS~~L~~~--------G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~ 253 (428)
+..+|.+ ++.+ +++||+||.++ |.|+|||+|. .++ |++.|+|+.. ..+|.
T Consensus 183 ~~~~~~~l~~-qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~--~~y~G~l~~~pv~~--------------~~~w~ 245 (383)
T 2x0b_A 183 VTPIFDNIIS-QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP--QHYEGNFHYINLIK--------------TGVWQ 245 (383)
T ss_dssp CCCHHHHHHT-TTCCSSSEEEEEECCSCC----CCEEEEESSCCG--GGEEEEEEEEEBSS--------------TTSCE
T ss_pred CCcHHHHHHh-CCCCCCCEEEEEEcCCCCcccCCCcEEEECCcCh--HHcCCceEEEEcCC--------------CceEE
Confidence 5567777 7666 68999999863 8999999983 244 8999999974 46999
Q ss_pred EEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCC
Q 044303 254 IGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGS 333 (428)
Q Consensus 254 v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~ 333 (428)
|.|++|+|+++.+.. .+.+.+||||||+++++|+++|++|.+++.+.. . ......+|+..
T Consensus 246 v~l~~i~v~~~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~-~g~~~v~C~~~----- 305 (383)
T 2x0b_A 246 IQMKGVSVGSSTLLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----R-LFDYVVKCNEG----- 305 (383)
T ss_dssp EEECEEEESSCCCBS---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----C-SSCEEEEGGGT-----
T ss_pred EEEeEEEeCCceEEc---------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----c-CCcEEEecccc-----
Confidence 999999999987432 124679999999999999999999999986432 1 11223468865
Q ss_pred CCcCCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEE-EEEeCCC--CCCCceeechhhhcceEEEEeCCCCEEEE
Q 044303 334 THVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCL-AFVDGGV--NPTTSIVIGAYQLEDNLLQFDLAKSRLGF 408 (428)
Q Consensus 334 ~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGf 408 (428)
..+|+|+|+|+| ++|+|++++|+++..+ +..|+ ++...+. ...+.||||++|||++|+|||++++||||
T Consensus 306 ----~~~P~i~f~~~g--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGf 379 (383)
T 2x0b_A 306 ----PTLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGF 379 (383)
T ss_dssp ----TTCCCEEEEETT--EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEE
T ss_pred ----ccCceEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeE
Confidence 368999999987 9999999999987653 46899 5765432 12468999999999999999999999999
Q ss_pred eec
Q 044303 409 SSS 411 (428)
Q Consensus 409 a~~ 411 (428)
|++
T Consensus 380 A~a 382 (383)
T 2x0b_A 380 ALA 382 (383)
T ss_dssp EEE
T ss_pred EEc
Confidence 984
No 8
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=7.1e-54 Score=424.67 Aligned_cols=309 Identities=19% Similarity=0.192 Sum_probs=243.2
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPG 110 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~ 110 (428)
....||.+. .+.+|+++|.||||||+++|+|||||+++||+|..| .+..|..+..+++. .+++
T Consensus 45 ~~~~~l~n~-~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C-----------~~~~C~~~~~y~~~-----~SsT 107 (370)
T 3psg_A 45 IGDEPLENY-LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-----------SSLACSDHNQFNPD-----DSST 107 (370)
T ss_dssp SCCCTTGGG-TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSGGGTTSCCBCGG-----GCTT
T ss_pred cceecceec-cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCC-----------CCcccCCCCCCCCc-----cCcC
Confidence 456788763 578999999999999999999999999999999754 45567776666544 2233
Q ss_pred CCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEecccccccc-CcCCCcceEEecCCCCCc---
Q 044303 111 CNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLE-GLASGFQGMAGLGRNKVS--- 186 (428)
Q Consensus 111 ~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~-~~~~~~~GIlGLg~~~~S--- 186 (428)
+....|.|.+.|+ +| ++.|.+++|+|++++. +++++.|||++..... ......+||||||++.++
T Consensus 108 ~~~~~~~~~i~Yg-~G-s~~G~~~~Dtv~ig~~---------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~ 176 (370)
T 3psg_A 108 FEATSQELSITYG-TG-SMTGILGYDTVQVGGI---------SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASG 176 (370)
T ss_dssp CEEEEEEEEEESS-SC-EEEEEEEEEEEEETTE---------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGG
T ss_pred cEECCcEEEEEeC-Cc-eEEEEEEEEEEeeCCc---------ccCCeEEEEEEeecccccccCCccceeccCCccccccC
Confidence 3456789999995 55 4899999999999875 7889999999887332 123468999999998654
Q ss_pred ---hHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEe
Q 044303 187 ---LPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVK 257 (428)
Q Consensus 187 ---~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~ 257 (428)
+..+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.++
T Consensus 177 ~~~~~~~l~~-qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~--~~y~g~l~~~pv~~--------------~~~w~v~l~ 239 (370)
T 3psg_A 177 ATPVFDNLWD-QGLVSQDLFSVYLSSNDDSGSVVLLGGIDS--SYYTGSLNWVPVSV--------------EGYWQITLD 239 (370)
T ss_dssp CCCHHHHHHH-TTCSSSSEEEEEEC-----CEEEEETCCCG--GGBSSCCEEEECSE--------------ETTEEEEEC
T ss_pred CCCHHHHHHH-CCCCCCCEEEEEEccCCCCCeEEEEEeeCh--HhcCCcceeecccc--------------cceeEEEEe
Confidence 5667887 7766 68999999985 9999999983 234 9999999975 368999999
Q ss_pred EEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcC
Q 044303 258 SILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVG 337 (428)
Q Consensus 258 ~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 337 (428)
+|+|+++.+... +.+.+||||||+++++|++++++|.+++.+... .......+|...
T Consensus 240 ~i~v~g~~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-----~~g~~~v~C~~~--------- 296 (370)
T 3psg_A 240 SITMDGETIACS---------GGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDGEMVISCSSI--------- 296 (370)
T ss_dssp EEESSSSEEECT---------TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTCCEECCGGGG---------
T ss_pred EEEECCEEEecC---------CCceEEEcCCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEECCCc---------
Confidence 999999876532 246799999999999999999999998865421 111223467754
Q ss_pred CCCCeEEEEEcCCceEEEEeccccEEEeCCCeEEEE-EEeCCC--CCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 338 AAAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCLA-FVDGGV--NPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 338 ~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~~-~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
..+|+|+|+|+| ++++||+++|+++ . +..|+. +..... ..++.||||++|||++|+|||++++|||||++
T Consensus 297 ~~lP~i~f~~~g--~~~~l~~~~yi~~-~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a 369 (370)
T 3psg_A 297 DSLPDIVFTIDG--VQYPLSPSAYILQ-D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV 369 (370)
T ss_dssp GGCCCEEEEETT--EEEEECHHHHEEE-C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ccCCcEEEEECC--EEEEECHHHhccc-C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEc
Confidence 368999999987 9999999999998 3 346984 554321 12347999999999999999999999999984
No 9
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4e-53 Score=418.69 Aligned_cols=319 Identities=15% Similarity=0.132 Sum_probs=247.5
Q ss_pred CCCceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCC
Q 044303 28 KPKALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPK 107 (428)
Q Consensus 28 ~~~~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~ 107 (428)
..+...+||.. ..+.+|+++|.||||+|++.|+|||||+++||+|..|.. +..|..+..+++. .
T Consensus 4 ~g~~~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~----------~~~C~~~~~y~~~-----~ 67 (361)
T 1mpp_A 4 DGSVDTPGLYD-FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDN----------SEGCVGKRFFDPS-----S 67 (361)
T ss_dssp -CCEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCG----------GGTCCSSCCBCGG-----G
T ss_pred CCccceEEeec-CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCC----------CccCCCCCcCCCc-----c
Confidence 35567789997 357899999999999999999999999999999976521 3456655555543 2
Q ss_pred CCCCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccc-----cCc-CCCcceEEecC
Q 044303 108 GPGCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLL-----EGL-ASGFQGMAGLG 181 (428)
Q Consensus 108 ~~~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~-----~~~-~~~~~GIlGLg 181 (428)
++++....|.|.+.|+ +++ +.|.+++|+|+|++. +++++.|||++.... ..+ ....+||||||
T Consensus 68 SsT~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg 136 (361)
T 1mpp_A 68 SSTFKETDYNLNITYG-TGG-ANGIYFRDSITVGGA---------TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAA 136 (361)
T ss_dssp CTTCEEEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECS
T ss_pred CCceEecCCeEEEEEC-Cce-EEEEEEEEEEEECCE---------EEeceEEEEEEeccCccccccccccCCCCCEEEeC
Confidence 2334456799999995 665 899999999999875 788999999988633 112 24689999999
Q ss_pred CCCCc------------hHHhhhhhhccC-CCcEEEecCCC---CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCc
Q 044303 182 RNKVS------------LPSQLSAAAFKL-DRKFSICLSSN---GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASF 244 (428)
Q Consensus 182 ~~~~S------------~~~ql~~~~~~~-~~~FS~~L~~~---G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~ 244 (428)
++.++ ++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.....
T Consensus 137 ~~~~s~~~~~~~~~~~~~~~~l~~-~g~i~~~~FS~~l~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~~~------- 206 (361)
T 1mpp_A 137 YPDNTAMEAEYGDTYNTVHVNLYK-QGLISSPVFSVYMNTNDGGGQVVFGGVNN--TLLGGDIQYTDVLKSRG------- 206 (361)
T ss_dssp CGGGSHHHHHHSCCCCCHHHHHHH-TTSSSSSEEEEECCCSSSEEEEEESSCCG--GGBSSCCEEEECEEETT-------
T ss_pred CcccccccccccccCCCHHHHHHH-cCCCCCcEEEEEecCCCCCcEEEEecCCh--hhcCCceEEEEcccCCC-------
Confidence 97554 4557777 7666 68999999984 9999999983 234 8999999987531
Q ss_pred CCCCCcceEEEEeEEEEcCeEeeccccccccccCCCCCeE-EeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 044303 245 EGESSAEYFIGVKSILISGNVVPLNKSLLSINKEGFGGTK-ISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFG 323 (428)
Q Consensus 245 ~~~~~~~y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~i-iDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 323 (428)
...+|.|.|++|+|+++.+.... ...+| |||||++++||+++|++|.+++.+... ... .....
T Consensus 207 ---~~~~~~v~l~~i~v~~~~~~~~~---------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~-g~~~~ 270 (361)
T 1mpp_A 207 ---GYFFWDAPVTGVKIDGSDAVSFD---------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ESQ-QGYTV 270 (361)
T ss_dssp ---EEEEEEEEEEEEEETTEEEEEEE---------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EET-TEEEE
T ss_pred ---ceeEEEEEEeEEEECCeeeccCC---------CCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CCC-CcEEE
Confidence 12389999999999998864321 24689 999999999999999999999865421 111 11235
Q ss_pred cceecCCCCCCCcCCCC-CeEEEEE--cC---CceEEEEeccccEEEeCC-CeEEE-EEEeCCCCCCCceeechhhhcce
Q 044303 324 ACFNSSFIGSTHVGAAA-PEIHLYM--PG---TNRMWKIFGAHSMVRVGK-HAMCL-AFVDGGVNPTTSIVIGAYQLEDN 395 (428)
Q Consensus 324 ~C~~~~~~~~~~~~~~~-P~i~~~f--~g---~~~~~~i~~~~y~~~~~~-~~~C~-~~~~~~~~~~~~~ILG~~flr~~ 395 (428)
+|+... .+ |+|+|+| ++ ++++|+|++++|+++... +..|+ ++.... .+.||||+.|||++
T Consensus 271 ~C~~~~---------~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~---~~~~iLG~~fl~~~ 338 (361)
T 1mpp_A 271 PCSKYQ---------DSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG---GNQFIVGNLFLRFF 338 (361)
T ss_dssp EHHHHT---------TCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES---SSCCEEEHHHHTTE
T ss_pred ECCCcc---------cCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC---CCCEEEChHHhccE
Confidence 788642 56 9999999 61 139999999999998753 46898 666542 35799999999999
Q ss_pred EEEEeCCCCEEEEeec
Q 044303 396 LLQFDLAKSRLGFSSS 411 (428)
Q Consensus 396 yvvFD~e~~rIGfa~~ 411 (428)
|+|||++++|||||+.
T Consensus 339 yvvfD~~~~~igfa~~ 354 (361)
T 1mpp_A 339 VNVYDFGKNRIGFAPL 354 (361)
T ss_dssp EEEEETTTTEEEEEEB
T ss_pred EEEEECCCCEEEEEEc
Confidence 9999999999999984
No 10
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.5e-53 Score=417.20 Aligned_cols=308 Identities=17% Similarity=0.220 Sum_probs=241.3
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCC--CCCCCCCcccccCCCcccCCCCCCCccCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCE--QGFVSSSYKPARCGSAQCKIAGSESCVESCLPKG 108 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~--~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~ 108 (428)
.+.+||.+ .+.+|+++|.||||+|++.|+|||||+++||+|. .|..... ...+..|..+..+++. .+
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~-----~S 70 (342)
T 2qzx_A 2 PVAVTLHN--EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWR----GDKGDFCKSAGSYSPA-----SS 70 (342)
T ss_dssp CEEEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSS----SCCTTGGGTTCCBCGG-----GC
T ss_pred ceeEEEec--CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccc----cCccccccCCCcCCcc-----cC
Confidence 47889998 5789999999999999999999999999999865 4421000 0013356655555543 12
Q ss_pred CCCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCCC---
Q 044303 109 PGCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNKV--- 185 (428)
Q Consensus 109 ~~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~~--- 185 (428)
+++....|.|.+.|+ +|+.+.|.+++|+|+|++. +++++.|||++.. ...+||||||++..
T Consensus 71 sT~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~------~~~~GilGLg~~~~~~~ 134 (342)
T 2qzx_A 71 RTSQNLNTRFDIKYG-DGSYAKGKLYKDTVGIGGV---------SVRDQLFANVWST------SARKGILGIGFQSGEAT 134 (342)
T ss_dssp TTCEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEE------CSSSCEEECSCGGGCSS
T ss_pred CCcccCCCcEEEEeC-CCCeEEEEEEEEEEEECCE---------EecceEEEEEEec------CCCcCEEEEccccccCC
Confidence 333456799999996 8888999999999999875 7889999999876 24799999999754
Q ss_pred -----chHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEE
Q 044303 186 -----SLPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFI 254 (428)
Q Consensus 186 -----S~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v 254 (428)
+++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+... .+|.|
T Consensus 135 ~~~~~~~~~~L~~-qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~--------------~~~~v 197 (342)
T 2qzx_A 135 EFDYDNLPISLRN-QGIIGKAAYSLYLNSAEASTGQIIFGGIDK--AKYSGSLVDLPITSE--------------KKLTV 197 (342)
T ss_dssp SSCCCCHHHHHHH-TTSSSSSEEEEECCCTTCSEEEEEETEEET--TSBSSCCEEEECCCS--------------SSCEE
T ss_pred CccCccHHHHHHH-CCCcCccEEEEEeCCCCCCCeEEEECccch--hhEecceEEEeccCC--------------ceEEE
Confidence 68889998 8777 68999999863 9999999983 245 89999999753 48999
Q ss_pred EEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCC
Q 044303 255 GVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGST 334 (428)
Q Consensus 255 ~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 334 (428)
.|++|+|+++.+..+ ..+||||||++++||+++|++|.+++.+... +.+........+|+
T Consensus 198 ~l~~i~v~g~~~~~~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-~~~~~~~~~~~~C~-------- 257 (342)
T 2qzx_A 198 GLRSVNVRGRNVDAN-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMK-FDSAGNKVYVADCK-------- 257 (342)
T ss_dssp EEEEEEETTEEEEEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE-ECTTSCEEEEECTT--------
T ss_pred EEeEEEECCEecCCC-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeee-eccCCCcEEEEECC--------
Confidence 999999999887532 3589999999999999999999999976542 11111101223564
Q ss_pred CcCCCCCeEEEEEcCCceEEEEeccccEEEeC-----CCeEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEe
Q 044303 335 HVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVG-----KHAMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFS 409 (428)
Q Consensus 335 ~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~-----~~~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa 409 (428)
.+|.|+|+|++ +++++||+++|+++.. .+..|+..+... +.||||+.|||++|+|||++++|||||
T Consensus 258 ----~~p~i~f~f~~-g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA 328 (342)
T 2qzx_A 258 ----TSGTIDFQFGN-NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMA 328 (342)
T ss_dssp ----CCCEEEEEETT-TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEE
T ss_pred ----CCCcEEEEECC-CcEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEE
Confidence 26899999975 5999999999998742 235798655543 258999999999999999999999999
Q ss_pred ec
Q 044303 410 SS 411 (428)
Q Consensus 410 ~~ 411 (428)
+.
T Consensus 329 ~~ 330 (342)
T 2qzx_A 329 PV 330 (342)
T ss_dssp EB
T ss_pred ee
Confidence 83
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.4e-53 Score=415.63 Aligned_cols=307 Identities=17% Similarity=0.162 Sum_probs=243.1
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPG 110 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~ 110 (428)
...+||.+ ..+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..+++. .+++
T Consensus 3 ~~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~-----~SsT 65 (323)
T 3cms_A 3 VASVPLTN-YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYC-----------KSNACKNHQRFDPR-----KSST 65 (323)
T ss_dssp CEEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG-----GCTT
T ss_pred cceeeeEe-ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCC-----------CcccccCCCCCCCc-----cCCC
Confidence 34688887 3578999999999999999999999999999999765 34567655555543 2334
Q ss_pred CCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCC----
Q 044303 111 CNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKV---- 185 (428)
Q Consensus 111 ~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~---- 185 (428)
+....|.|.+.|+ +++ +.|.+++|+|++++. +++++.|||++......+ ....+||||||++..
T Consensus 66 ~~~~~~~~~i~Yg-~Gs-~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 66 FQNLGKPLSIHYG-TGS-MQGILGYDTVTVSNI---------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp CEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred eEECCcEEEEEeC-CCC-eEEEEEEEEEEECCe---------EEeccEEEEEEecccccccccCCceEEecCcchhhccC
Confidence 4556799999995 654 899999999999875 788999999987632111 235799999998764
Q ss_pred --chHHhhhhhhccC-CCcEEEecCCC---CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeE
Q 044303 186 --SLPSQLSAAAFKL-DRKFSICLSSN---GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKS 258 (428)
Q Consensus 186 --S~~~ql~~~~~~~-~~~FS~~L~~~---G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~ 258 (428)
++..+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.+++
T Consensus 135 ~~~~~~~l~~-q~~i~~~~FS~~l~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v~l~~ 197 (323)
T 3cms_A 135 SIPVFDNMMN-RHLVAQDLFSVYMDRNGQESMLTLGAIDP--SYYTGSLHWVPVTV--------------QQYWQFTVDS 197 (323)
T ss_dssp CCCHHHHHHH-TTCSSSSEEEEECCTTSSCEEEEESCCCG--GGEEEEEEEEECSS--------------BTTBEEEEEE
T ss_pred CCCHHHHHHH-CCCCCCCEEEEEECCCCCCEEEEECCCCh--hhccCceEEEECcc--------------CCeEEEEEee
Confidence 46677887 7666 78999999886 9999999983 244 8999999974 3689999999
Q ss_pred EEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCC
Q 044303 259 ILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGA 338 (428)
Q Consensus 259 i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 338 (428)
|+|+++.+..+. ...+||||||++++||+++|++|.+++.+... .......+|+.. .
T Consensus 198 i~v~~~~~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~---------~ 254 (323)
T 3cms_A 198 VTISGVVVACEG---------GCQAILDTGTSKLVGPSSDILNIQQAIGATQN-----QYGEFDIDCDNL---------S 254 (323)
T ss_dssp EEETTEEEESTT---------CEEEEECTTCCSEEECHHHHHHHHHHHTCEEE-----TTTEEEECTTCT---------T
T ss_pred EEECCEEeecCC---------CcEEEEecCCccEeCCHHHHHHHHHHhCCeec-----CCCcEEEECCCC---------c
Confidence 999998875431 35799999999999999999999999864321 111122468754 3
Q ss_pred CCCeEEEEEcCCceEEEEeccccEEEeCCCeEEEE-EEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 339 AAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCLA-FVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 339 ~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
.+|+|+|+|+| ++++|++++|+++ ++..|+. +..... .+.||||+.|||++|+|||++++|||||++
T Consensus 255 ~~P~i~f~f~g--~~~~i~~~~y~~~--~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 322 (323)
T 3cms_A 255 YMPTVVFEING--KMYPLTPSAYTSQ--DQGFCTSGFQSENH--SQKWILGDVFIREYYSVFDRANNLVGLAKA 322 (323)
T ss_dssp TSCCEEEEETT--EEEEECHHHHEEE--ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cCceEEEEECC--EEEEECHHHhccC--CCCEEEEEEEeCCC--CCcEEECHHHhhceEEEEECCCCEEEEEEC
Confidence 68999999977 9999999999998 4568985 665532 357999999999999999999999999984
No 12
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.3e-53 Score=412.46 Aligned_cols=306 Identities=18% Similarity=0.240 Sum_probs=243.2
Q ss_pred eEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCC
Q 044303 32 LVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGC 111 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~ 111 (428)
+.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..+++. .++++
T Consensus 2 ~~~~l~n~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~-----~SsT~ 64 (324)
T 1am5_A 2 VTEQMKNE-ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-----------SAQACSNHNKFKPR-----QSSTY 64 (324)
T ss_dssp EEEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTC-----------CSHHHHTSCCBCGG-----GCTTC
T ss_pred ceeeeecC-CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCC-----------CcccccCCCcCCCc-----cCCCe
Confidence 56899973 678999999999999999999999999999999765 34456655555543 22334
Q ss_pred CCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc----
Q 044303 112 NNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS---- 186 (428)
Q Consensus 112 ~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S---- 186 (428)
....|.|.+.|+ +| ++.|.+++|+|++++. +++++.|||++......+ ....+||||||++..+
T Consensus 65 ~~~~~~~~i~Yg-~G-s~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 65 VETGKTVDLTYG-TG-GMRGILGQDTVSVGGG---------SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp EEEEEEEEEECS-SC-EEEEEEEEEEEESSSS---------CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGC
T ss_pred EeCCcEEEEEEC-CC-CeEEEEEECceeECCc---------EEcccEEEEEEecccccccCCCCceEEecCCccccccCC
Confidence 456799999995 65 4599999999999875 778999999987632222 2468999999998654
Q ss_pred --hHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeE
Q 044303 187 --LPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKS 258 (428)
Q Consensus 187 --~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~ 258 (428)
++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.+++
T Consensus 134 ~~~~~~l~~-qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v~l~~ 196 (324)
T 1am5_A 134 VPVFDNMGS-QSLVEKDLFSFYLSGGGANGSEVMLGGVDN--SHYTGSIHWIPVTA--------------EKYWQVALDG 196 (324)
T ss_dssp CCHHHHHHH-TTCSSSSEEEEECCSTTCSCEEEEESSCCG--GGBCSCCEEEEEEE--------------ETTEEEEECE
T ss_pred CchHHhHHh-cCCCCCCEEEEEecCCCCCCcEEEECccCH--HHcCCceEEEecCC--------------CcEEEEEEeE
Confidence 6677887 7666 78999999875 9999999983 234 8999999985 3689999999
Q ss_pred EEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCC
Q 044303 259 ILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGA 338 (428)
Q Consensus 259 i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 338 (428)
|+|+++.+... + ..+||||||++++||+++|++|.+++.+. . .. .....+|+.. .
T Consensus 197 i~v~~~~~~~~---------~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~----~~-g~~~~~C~~~---------~ 251 (324)
T 1am5_A 197 ITVNGQTAACE---------G-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E----NQ-GEMMGNCASV---------Q 251 (324)
T ss_dssp EEETTEECCCC---------C-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E----CC-CCEECCTTSS---------S
T ss_pred EEECCceeecc---------C-ceEEEecCCccEECCHHHHHHHHHHhCCc-c----cC-CcEEEeCCCc---------c
Confidence 99999875321 1 56999999999999999999999998654 1 11 1123568754 3
Q ss_pred CCCeEEEEEcCCceEEEEeccccEEEeCCCeEEE-EEEeCCC--CCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 339 AAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCL-AFVDGGV--NPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 339 ~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
.+|+|+|+|+| ++++|++++|+++. +..|+ ++...+. ...+.||||+.|||++|+|||++++|||||++
T Consensus 252 ~~P~i~f~f~g--~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a 323 (324)
T 1am5_A 252 SLPDITFTING--VKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPA 323 (324)
T ss_dssp SSCCEEEEETT--EEEEECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEB
T ss_pred cCCcEEEEECC--EEEEECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEEC
Confidence 68999999987 99999999999986 56898 5665431 12458999999999999999999999999984
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=9.4e-53 Score=410.89 Aligned_cols=307 Identities=20% Similarity=0.237 Sum_probs=241.6
Q ss_pred eEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCC
Q 044303 32 LVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGC 111 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~ 111 (428)
..+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..+++. .++++
T Consensus 3 ~~~~l~~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~-----~SsT~ 65 (329)
T 1dpj_A 3 HDVPLTNY-LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNEC-----------GSLACFLHSKYDHE-----ASSSY 65 (329)
T ss_dssp EEEECEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG-----GCTTC
T ss_pred cceeeeec-CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCC-----------CCcccCCcCcCCcc-----cCcCe
Confidence 46888864 478999999999999999999999999999999765 33456655555543 22334
Q ss_pred CCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccc-cCcCCCcceEEecCCCCCch---
Q 044303 112 NNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLL-EGLASGFQGMAGLGRNKVSL--- 187 (428)
Q Consensus 112 ~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~-~~~~~~~~GIlGLg~~~~S~--- 187 (428)
....|.|.+.|+ +| ++.|.+++|+|+|++. +++++.|||++.... .......+||||||++..++
T Consensus 66 ~~~~~~~~i~Yg-~G-s~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~ 134 (329)
T 1dpj_A 66 KANGTEFAIQYG-TG-SLEGYISQDTLSIGDL---------TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKV 134 (329)
T ss_dssp EEEEEEEEEEET-TE-EEEEEEEEEEEEETTE---------EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGC
T ss_pred EECCcEEEEEEC-Cc-eEEEEEEEEEEEECCe---------EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCC
Confidence 456799999995 66 7999999999999875 788999999987632 11234679999999987654
Q ss_pred ---HHhhhhhhccC-CCcEEEecCCC-------CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEE
Q 044303 188 ---PSQLSAAAFKL-DRKFSICLSSN-------GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIG 255 (428)
Q Consensus 188 ---~~ql~~~~~~~-~~~FS~~L~~~-------G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~ 255 (428)
..+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. +.+|.|.
T Consensus 135 ~~~~~~l~~-qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v~ 197 (329)
T 1dpj_A 135 VPPFYNAIQ-QDLLDEKRFAFYLGDTSKDTENGGEATFGGIDE--SKFKGDITWLPVRR--------------KAYWEVK 197 (329)
T ss_dssp CCHHHHHHH-TTCCSSSEEEEEECCGGGTCSSSEEEEESSCCG--GGEEEEEEEEECSS--------------BTTBEEE
T ss_pred CCHHHHHHh-cCCcCCCEEEEEecCCCCCCCCCcEEEEcCCCh--hhcCCceEEEEcCC--------------CceEEEE
Confidence 456777 7666 68999999652 9999999983 244 8999999974 3689999
Q ss_pred EeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCC
Q 044303 256 VKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTH 335 (428)
Q Consensus 256 l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 335 (428)
+++|+|+++.+... +..+||||||++++||+++|++|.+++.+... .......+|...
T Consensus 198 l~~i~v~~~~~~~~----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~------- 255 (329)
T 1dpj_A 198 FEGIGLGDEYAELE----------SHGAAIDTGTSLITLPSGLAEMINAEIGAKKG-----WTGQYTLDCNTR------- 255 (329)
T ss_dssp EEEEEETTEEEECS----------SCEEEECTTCSCEEECHHHHHHHHHHHTCEEC-----TTSSEEECGGGG-------
T ss_pred eeeEEECCeEecCC----------CccEEeeCCCCcEECCHHHHHHHHHHhCCccC-----CCCeEEEECCCC-------
Confidence 99999999887532 36799999999999999999999999864311 111112356643
Q ss_pred cCCCCCeEEEEEcCCceEEEEeccccEEEeCCCeEEE-EEEeCCC--CCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 336 VGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCL-AFVDGGV--NPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 336 ~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
..+|+|+|+|+| .+++|++++|+++.. ..|+ ++...+. ...+.||||+.|||++|+|||++++|||||++
T Consensus 256 --~~~P~i~f~f~g--~~~~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 328 (329)
T 1dpj_A 256 --DNLPDLIFNFNG--YNFTIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKA 328 (329)
T ss_dssp --GGCCCEEEEETT--EEEEECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred --CcCCcEEEEECC--EEEEECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEEC
Confidence 368999999987 899999999999864 5898 5655421 12468999999999999999999999999984
No 14
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.8e-52 Score=409.27 Aligned_cols=306 Identities=15% Similarity=0.262 Sum_probs=242.1
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCC-cccCCCCCCCccCCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGS-AQCKIAGSESCVESCLPKGP 109 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s-~~C~~~~~~~c~~~~~~~~~ 109 (428)
.+.+||.+ .+..|+++|.||||+|++.|+|||||+++||++.. ..|.+ ..|..+..++.. .++
T Consensus 2 ~i~~~l~~--~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~---------~~C~~~~~C~~~~~y~~~-----~Ss 65 (339)
T 3fv3_A 2 SISLSLIN--EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSN---------AQCGKGVDCKSSGTFTPS-----SSS 65 (339)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEE---------EEECTTCCTTTTCCBCGG-----GCT
T ss_pred ceeeEEEc--CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCC---------CCCCCCCCCCCCCcCCCc-----cCc
Confidence 47899998 46899999999999999999999999999999542 11221 145544444432 122
Q ss_pred CCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCCCc---
Q 044303 110 GCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNKVS--- 186 (428)
Q Consensus 110 ~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~~S--- 186 (428)
++....|.|.+.|+ +++.+.|.+++|+|+|++. +++++.|||++... ..+||||||++..+
T Consensus 66 T~~~~~~~~~i~Yg-~gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~ 129 (339)
T 3fv3_A 66 SYKNLGAAFTIRYG-DGSTSQGTWGKDTVTINGV---------SITGQQIADVTQTS------VDQGILGIGYTSNEAVY 129 (339)
T ss_dssp TCEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEES------SSSCEEECSCGGGCCCB
T ss_pred ceeeCCceEEEEEC-CCceEEEEEEEEEEEECCE---------EECceEEEEEEecC------CCceeEEecCccccccc
Confidence 33456799999996 8889999999999999875 78899999998862 25999999987643
Q ss_pred -------------hHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCC
Q 044303 187 -------------LPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGE 247 (428)
Q Consensus 187 -------------~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~ 247 (428)
++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+...
T Consensus 130 ~~~~~~~~~~~~~~~~~L~~-~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~------------ 194 (339)
T 3fv3_A 130 DTSGRQTTPNYDNVPVTLKK-QGKIRTNAYSLYLNSPSAETGTIIFGGVDN--AKYSGKLVAEQVTSS------------ 194 (339)
T ss_dssp CTTSCBCSCCCCCHHHHHHH-TTSCSSSEEEEECCCTTCSEEEEEETEEET--TSBSSCCEEEEBCCS------------
T ss_pred cccccccCccCCcHHHHHHH-CCCCCCceEEEEECCCCCCCeEEEEeeech--HHeecceEEEecccC------------
Confidence 7889998 7777 58899999875 9999999983 245 99999999753
Q ss_pred CCcceEEEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCcccee
Q 044303 248 SSAEYFIGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFN 327 (428)
Q Consensus 248 ~~~~y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~ 327 (428)
.+|.|.+++|.|+++.+... ..+||||||++++||+++|++|.+++.+....... .......+|+.
T Consensus 195 --~~~~v~l~~i~v~g~~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~-~~~~~~~~C~~ 260 (339)
T 3fv3_A 195 --QALTISLASVNLKGSSFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVAR-DQYLYFIDCNT 260 (339)
T ss_dssp --SSCEEEEEEEEESSCEEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEET-TEEEEEECTTC
T ss_pred --ccEEEEEEEEEECCEeecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccc-cCceEEEecCC
Confidence 58999999999999887532 35899999999999999999999999755321000 11122346764
Q ss_pred cCCCCCCCcCCCCCeEEEEEcCCceEEEEeccccEEEeCCCeEEE-EEEeCCCCCCCceeechhhhcceEEEEeCCCCEE
Q 044303 328 SSFIGSTHVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCL-AFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRL 406 (428)
Q Consensus 328 ~~~~~~~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rI 406 (428)
..+|+|+|+|++ +++++||+++|+++..+ ..|+ ++.. . +.||||+.|||++|+|||++++||
T Consensus 261 ----------~~~p~i~f~f~~-g~~~~v~~~~~~~~~~~-~~C~~~i~~-~----~~~ilG~~fl~~~y~vfD~~~~~i 323 (339)
T 3fv3_A 261 ----------DTSGTTVFNFGN-GAKITVPNTEYVYQNGD-GTCLWGIQP-S----DDTILGDNFLRHAYLLYNLDANTI 323 (339)
T ss_dssp ----------CCCSEEEEEETT-SCEEEEEGGGGEEECSS-SCEEESEEE-C----SSCEECHHHHTTEEEEEETTTTEE
T ss_pred ----------CCCCcEEEEECC-CCEEEECHHHheeeCCC-CeEEEEEEe-C----CcEEeChHHHhCEEEEEECCCCEE
Confidence 157999999975 49999999999998644 4574 6665 2 369999999999999999999999
Q ss_pred EEeecCccccCCcc
Q 044303 407 GFSSSLLARQTTCS 420 (428)
Q Consensus 407 Gfa~~~~~~~~~C~ 420 (428)
|||+ ++|.
T Consensus 324 gfA~------~~~~ 331 (339)
T 3fv3_A 324 SIAQ------VKYT 331 (339)
T ss_dssp EEEE------BCCC
T ss_pred EEEe------cCCC
Confidence 9998 6676
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=4.9e-53 Score=411.39 Aligned_cols=304 Identities=18% Similarity=0.161 Sum_probs=238.3
Q ss_pred EEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCC
Q 044303 34 VPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNN 113 (428)
Q Consensus 34 ~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~ 113 (428)
.||++. .+.+|+++|.||||||+++|+|||||+++||+|..| .+..|..+..+++. .++++..
T Consensus 3 ~~l~n~-~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C-----------~~~~C~~~~~y~~~-----~SsT~~~ 65 (320)
T 4aa9_A 3 EPLTSY-LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYC-----------KSNVCKNHHRFDPR-----KSSTFRN 65 (320)
T ss_dssp -----C-CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG-----GCTTCEE
T ss_pred ccceec-cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCC-----------CccccCCCCCCCCC-----CCcCeEc
Confidence 577764 578999999999999999999999999999999755 44567666555543 2233345
Q ss_pred CCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCC------c
Q 044303 114 NTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKV------S 186 (428)
Q Consensus 114 ~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~------S 186 (428)
..|.|.+.|+ +++ +.|.+++|+|+|++. +++++.|||++......+ ....+||||||++.. +
T Consensus 66 ~~~~~~i~Yg-~gs-~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 134 (320)
T 4aa9_A 66 LGKPLSIHYG-TGS-MEGFLGYDTVTVSNI---------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVP 134 (320)
T ss_dssp EEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCC
T ss_pred CCcEEEEEEC-CcE-EEEEEEEEEEEECCE---------eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCC
Confidence 6789999995 655 899999999999885 788999999987632111 235799999998754 4
Q ss_pred hHHhhhhhhccC-CCcEEEecCCC---CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEEE
Q 044303 187 LPSQLSAAAFKL-DRKFSICLSSN---GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSILI 261 (428)
Q Consensus 187 ~~~ql~~~~~~~-~~~FS~~L~~~---G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v 261 (428)
+..+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.+++|+|
T Consensus 135 ~~~~l~~-~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~w~v~l~~i~v 197 (320)
T 4aa9_A 135 VFDNMMD-RHLVARDLFSVYMDRNGQGSMLTLGAIDP--SYYTGSLHWVPVTL--------------QQYWQFTVDSVTI 197 (320)
T ss_dssp HHHHHHH-TTCSSSSEEEEECCSSSSCCEEEETCCCG--GGEEEEEEEEECSS--------------BTTBEEEECEEEE
T ss_pred HHHHHHh-CCCCCCceEEEEeCCCCCCeEEEEcccCH--HHccCceEEEEccc--------------CCceEEEEeEEEE
Confidence 6778888 7776 78999999974 9999999983 245 8999999964 4689999999999
Q ss_pred cCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCCCCC
Q 044303 262 SGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGAAAP 341 (428)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P 341 (428)
+++.+..+. ...+||||||++++||++++++|.+++.+... .......+|+.. ..+|
T Consensus 198 ~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~g~~~~~C~~~---------~~~p 254 (320)
T 4aa9_A 198 NGVAVACVG---------GCQAILDTGTSVLFGPSSDILKIQMAIGATEN-----RYGEFDVNCGNL---------RSMP 254 (320)
T ss_dssp TTEEEESTT---------CEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC-----TTSCEEECGGGG---------GGCC
T ss_pred CCEEeccCC---------CcEEEEECCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEeCCCC---------CcCc
Confidence 998876431 35799999999999999999999998854321 111223468765 3689
Q ss_pred eEEEEEcCCceEEEEeccccEEEeCCCeEEEE-EEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 342 EIHLYMPGTNRMWKIFGAHSMVRVGKHAMCLA-FVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 342 ~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
+|+|+|+| ++++|++++|+.+. +..|+. +..... ++.||||+.|||++|+|||++++|||||++
T Consensus 255 ~i~f~f~g--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~a 319 (320)
T 4aa9_A 255 TVVFEING--RDYPLSPSAYTSKD--QGFCTSGFQGDNN--SELWILGDVFIREYYSVFDRANNRVGLAKA 319 (320)
T ss_dssp CEEEEETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred eEEEEECC--EEEEECHHHhccCC--CCeEEEEEEcCCC--CCcEEEChHHhcceEEEEECCCCEEEEEec
Confidence 99999987 99999999999863 468984 655332 357999999999999999999999999984
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.9e-52 Score=408.64 Aligned_cols=307 Identities=17% Similarity=0.181 Sum_probs=235.0
Q ss_pred EEEEe-eCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCC
Q 044303 33 VVPVT-KDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGC 111 (428)
Q Consensus 33 ~~Pl~-~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~ 111 (428)
.+|+. ....+.+|+++|.||||+|++.|+|||||+++||+|.+|. +..|..+..+++. .++++
T Consensus 4 ~v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~~~~~~~y~~~-----~SsT~ 67 (329)
T 3c9x_A 4 SAPNHPSDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-----------KSSATGHAIYTPS-----KSSTS 67 (329)
T ss_dssp EEEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-----------HHHHTTSCCBCGG-----GCTTC
T ss_pred ceeeecCCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-----------ccccCCCCcCCcc-----cCcCc
Confidence 34555 4456789999999999999999999999999999998762 2234444444433 12333
Q ss_pred CC-CCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc---
Q 044303 112 NN-NTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS--- 186 (428)
Q Consensus 112 ~~-~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S--- 186 (428)
.. +.|.|.+.|+ +|+.++|.+++|+|+|++. +++++.|||++....... ....+||||||++..+
T Consensus 68 ~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 137 (329)
T 3c9x_A 68 KKVSGASWSISYG-DGSSSSGDVYTDKVTIGGF---------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVR 137 (329)
T ss_dssp EECTTCBEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCB
T ss_pred eEcCCCeEEEEeC-CCCcEEEEEEEEEEEECCE---------EEcceEEEEEEecCccccccCCCceeEEeCcccccccC
Confidence 33 5789999996 8888999999999999875 788999999987532111 1367999999997544
Q ss_pred ------hHHhhhhhhccCCCcEEEecCCC--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEe
Q 044303 187 ------LPSQLSAAAFKLDRKFSICLSSN--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVK 257 (428)
Q Consensus 187 ------~~~ql~~~~~~~~~~FS~~L~~~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~ 257 (428)
+..+|.+ + +.+++||+||.++ |.|+|||+|. .++ |++.|+|+... ..+|.|.|+
T Consensus 138 ~~~~~~~~~~l~~-~-i~~~~FS~~l~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~~~v~l~ 200 (329)
T 3c9x_A 138 PHPQKTWFSNAAS-S-LAEPLFTADLRHGQNGSYNFGYIDT--SVAKGPVAYTPVDNS-------------QGFWEFTAS 200 (329)
T ss_dssp SSCCCCHHHHHHT-T-SSSSEEEEECCSSSCEEEEESSCCG--GGCSSCEEEEECBCT-------------TSSCEEEEC
T ss_pred CCCCCCHHHHHHH-h-cCCCEEEEEecCCCCcEEEEeCcCh--hhcccceEEEEccCC-------------CceEEEEEe
Confidence 4556665 4 3468999999986 9999999983 244 89999999753 468999999
Q ss_pred EEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcC
Q 044303 258 SILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVG 337 (428)
Q Consensus 258 ~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 337 (428)
+|+|+++.+.. ....+||||||++++||+++|++|.+++..... ... ......+|+
T Consensus 201 ~i~v~~~~~~~----------~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~--~~~-~~~~~~~C~----------- 256 (329)
T 3c9x_A 201 GYSVGGGKLNR----------NSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY--DNQ-QEGVVFDCD----------- 256 (329)
T ss_dssp CEEETTCCCCS----------CCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE--ETT-TTEEEEETT-----------
T ss_pred eEEECCEeccC----------CCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE--cCC-CCEEEEECC-----------
Confidence 99999986531 135799999999999999999998887743211 111 111123576
Q ss_pred CCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEEE-EEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEee
Q 044303 338 AAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCLA-FVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSS 410 (428)
Q Consensus 338 ~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~ 410 (428)
..+|+|+|+|+| ++++||+++|++...+ ...|++ +..... .+.||||+.|||++|+|||++++|||||+
T Consensus 257 ~~~P~i~f~f~g--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 257 EDLPSFSFGVGS--STITIPGDLLNLTPLEEGSSTCFGGLQSSSG--IGINIFGDVALKAALVVFDLGNERLGWAQ 328 (329)
T ss_dssp CCCCCEEEEETT--EEEEECGGGGEEEESSTTCSEEEESEEECTT--TTSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEECC--EEEEECHHHeeeeccCCCCCeEEEEEEcCCC--CCcEEEChHHhccEEEEEECCCCEEeEec
Confidence 257999999987 9999999999987633 378997 444432 35799999999999999999999999997
No 17
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=9.8e-53 Score=410.76 Aligned_cols=306 Identities=19% Similarity=0.224 Sum_probs=241.1
Q ss_pred EEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCC
Q 044303 34 VPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNN 113 (428)
Q Consensus 34 ~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~ 113 (428)
+||+ ..+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..+++. .++++..
T Consensus 5 ~~l~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~-----~SsT~~~ 66 (329)
T 1htr_B 5 EPMA--YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYC-----------QSQACTSHSRFNPS-----ESSTYST 66 (329)
T ss_dssp CGGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSHHHHTSCCBCGG-----GCTTCEE
T ss_pred eeeE--EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC-----------CCcccCCCCcCCCc-----cCCCeEE
Confidence 5777 3678999999999999999999999999999999765 34456655555543 2233445
Q ss_pred CCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc------
Q 044303 114 NTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS------ 186 (428)
Q Consensus 114 ~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S------ 186 (428)
..|.|.+.|+ +++ +.|.+++|+|++++. +++++.|||++......+ ....+||||||++..+
T Consensus 67 ~~~~~~i~Yg-~gs-~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 135 (329)
T 1htr_B 67 NGQTFSLQYG-SGS-LTGFFGYDTLTVQSI---------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATT 135 (329)
T ss_dssp EEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCS
T ss_pred CCcEEEEEeC-CCC-eEEEEEeeeEEEcce---------EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCC
Confidence 6799999995 654 699999999999875 788999999987632212 2468999999998754
Q ss_pred hHHhhhhhhccC-CCcEEEecCCC-----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEE
Q 044303 187 LPSQLSAAAFKL-DRKFSICLSSN-----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSI 259 (428)
Q Consensus 187 ~~~ql~~~~~~~-~~~FS~~L~~~-----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i 259 (428)
++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.+++|
T Consensus 136 ~~~~l~~-qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v~l~~i 198 (329)
T 1htr_B 136 AMQGMVQ-EGALTSPVFSVYLSNQQGSSGGAVVFGGVDS--SLYTGQIYWAPVTQ--------------ELYWQIGIEEF 198 (329)
T ss_dssp HHHHHHH-TTCSSSSEEEEEECSSCSSEEEEEEESSCCG--GGEEEEEEEEEBCS--------------SSSCEEEECEE
T ss_pred HHHHHHh-cCCCCCCEEEEEEcCCCCCCCcEEEEcccCH--HHcCCceEEEECCC--------------CceEEEEEeEE
Confidence 6678887 7666 78999999875 9999999983 234 8999999974 36899999999
Q ss_pred EEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCCC
Q 044303 260 LISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGAA 339 (428)
Q Consensus 260 ~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 339 (428)
+|+++.+... .....+||||||++++||+++|++|.+++.+... .......+|+.. ..
T Consensus 199 ~v~~~~~~~~--------~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~---------~~ 256 (329)
T 1htr_B 199 LIGGQASGWC--------SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EYGQFLVNCNSI---------QN 256 (329)
T ss_dssp EETTEECCTT--------TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TTSCEEECGGGG---------GG
T ss_pred EECCceeeec--------CCCceEEEecCCccEECCHHHHHHHHHHhCCeec-----CCCeEEEeCCCc---------cc
Confidence 9999875411 1235799999999999999999999999865431 111223568764 36
Q ss_pred CCeEEEEEcCCceEEEEeccccEEEeCCCeEEE-EEEeCCC--CCCC-ceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 340 APEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCL-AFVDGGV--NPTT-SIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 340 ~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~--~~~~-~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
+|+|+|+|+| ++++|++++|+++.. + .|+ ++..... ..++ .||||+.|||++|+|||++++|||||++
T Consensus 257 ~P~i~f~f~g--~~~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~ 328 (329)
T 1htr_B 257 LPSLTFIING--VEFPLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATA 328 (329)
T ss_dssp SCCEEEEETT--EEEEECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEECC--EEEEECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeC
Confidence 8999999976 999999999999875 3 898 5655431 1234 7999999999999999999999999984
No 18
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.5e-52 Score=410.07 Aligned_cols=311 Identities=17% Similarity=0.224 Sum_probs=240.6
Q ss_pred eEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCC--CCCCCCcccccCCCcccCCCCCCCccCCCCCCCC
Q 044303 32 LVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQ--GFVSSSYKPARCGSAQCKIAGSESCVESCLPKGP 109 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~--c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~ 109 (428)
+.+|+.. .+.+|+++|.||||+|++.|+|||||+++||+|.. |..... ......|..+..+++. .++
T Consensus 3 v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~-----~Ss 71 (342)
T 3pvk_A 3 VPVTLHN--EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYS----DQTADFCKQKGTYDPS-----GSS 71 (342)
T ss_dssp EEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST----TCCTTGGGTTCCBCGG-----GCT
T ss_pred cceEEec--CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccc----ccccCCCCCCCcCCCc-----cCc
Confidence 6788887 57899999999999999999999999999998653 311000 0022456655555443 122
Q ss_pred CCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCC-----
Q 044303 110 GCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNK----- 184 (428)
Q Consensus 110 ~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~----- 184 (428)
++....|.|.+.|+ +++.+.|.+++|+|+|++. +++++.|||++... ..+||||||++.
T Consensus 72 T~~~~~~~~~i~Yg-~gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~ 135 (342)
T 3pvk_A 72 ASQDLNTPFKIGYG-DGSSSQGTLYKDTVGFGGV---------SIKNQVLADVDSTS------IDQGILGVGYKTNEAGG 135 (342)
T ss_dssp TCEEEEEEEEEECS-SSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEES------SSSCEEECSCGGGCSSC
T ss_pred ceeecCCeEEEEec-CCCeEEEEEEEEEEEECCE---------EecceEEEEEEccC------CCccEEEecCccccccc
Confidence 33455789999996 8888999999999999875 78899999998762 479999999986
Q ss_pred --CchHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEE
Q 044303 185 --VSLPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGV 256 (428)
Q Consensus 185 --~S~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l 256 (428)
.+++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+... .+|.|.+
T Consensus 136 ~~~~~~~~L~~-qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~--------------~~~~v~l 198 (342)
T 3pvk_A 136 SYDNVPVTLKK-QGVIAKNAYSLYLNSPDAATGQIIFGGVDN--AKYSGSLIALPVTSD--------------RELRISL 198 (342)
T ss_dssp SSCCHHHHHHH-TTSSSSSEEEEECCCTTCSEEEEEETEEET--TSBSSCCEEEECCCS--------------SSCEEEE
T ss_pred cCCcHHHHHHh-cCCCCCceEEEEeCCCCCCCcEEEECccCc--cceeeeeEEeecCcc--------------ceEEEEE
Confidence 468999998 7777 58899999874 9999999983 245 99999999753 4899999
Q ss_pred eEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCc
Q 044303 257 KSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHV 336 (428)
Q Consensus 257 ~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 336 (428)
++|.|+++.+..+ ...+||||||++++||+++|++|.+++.+.... ..........+|+
T Consensus 199 ~~i~v~g~~~~~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~-~~~~~~~~~~~C~---------- 257 (342)
T 3pvk_A 199 GSVEVSGKTINTD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ-DSNGNSFYEVDCN---------- 257 (342)
T ss_dssp EEEEETTEEEEEE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE-CTTSCEEEEECSC----------
T ss_pred eEEEECCEEecCC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecc-cCCCceEEEEecC----------
Confidence 9999999987643 246899999999999999999999999765421 1000001234555
Q ss_pred CCCCCeEEEEEcCCceEEEEeccccEEEeC--CC---eEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 337 GAAAPEIHLYMPGTNRMWKIFGAHSMVRVG--KH---AMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 337 ~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~--~~---~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
..|+|+|+|++ +.+++||+++|+++.. ++ ..|+..+... +.||||+.|||++|+|||++++|||||+
T Consensus 258 --~~p~i~f~f~~-g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~- 329 (342)
T 3pvk_A 258 --LSGDVVFNFSK-NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQ- 329 (342)
T ss_dssp --CCSEEEEEEST-TCEEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEE-
T ss_pred --CCCceEEEECC-CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEe-
Confidence 34899999996 4899999999998632 22 6798555442 4689999999999999999999999998
Q ss_pred CccccCCcc
Q 044303 412 LLARQTTCS 420 (428)
Q Consensus 412 ~~~~~~~C~ 420 (428)
++|.
T Consensus 330 -----~~~~ 333 (342)
T 3pvk_A 330 -----VKYT 333 (342)
T ss_dssp -----BCCC
T ss_pred -----cCCC
Confidence 5665
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.6e-52 Score=411.24 Aligned_cols=314 Identities=16% Similarity=0.222 Sum_probs=247.2
Q ss_pred CCceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCC
Q 044303 29 PKALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKG 108 (428)
Q Consensus 29 ~~~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~ 108 (428)
.+.+.+||++. .+.+|+++|.||||+|+++|+|||||+++||+|..|.. .+..|..+..+++. .+
T Consensus 5 ~~~~~~~l~n~-~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~---------~~~~C~~~~~y~~~-----~S 69 (341)
T 3k1w_A 5 NTTSSVILTNY-MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR---------LYTACVYHKLFDAS-----DS 69 (341)
T ss_dssp CBCEEEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT---------TCHHHHTSCCBCGG-----GC
T ss_pred CCCccccceEc-cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCC---------CCCcccCCCCCCCC-----cC
Confidence 45678999984 47899999999999999999999999999999987621 13456655555543 22
Q ss_pred CCCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEecccccccc-CcCCCcceEEecCCCCCc-
Q 044303 109 PGCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLE-GLASGFQGMAGLGRNKVS- 186 (428)
Q Consensus 109 ~~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~-~~~~~~~GIlGLg~~~~S- 186 (428)
+++....|.|.+.|+ +++ +.|.+++|+|+|++. ++ ++.|||++..... ......+||||||++..+
T Consensus 70 sT~~~~~~~~~i~Yg-~gs-~~G~~~~D~v~ig~~---------~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 137 (341)
T 3k1w_A 70 SSYKHNGTELTLRYS-TGT-VSGFLSQDIITVGGI---------TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAI 137 (341)
T ss_dssp TTCEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCG
T ss_pred cCeeECCCEEEEEEC-CcE-EEEEEEEEEEEECCc---------ee-eEEEEEEEEccccccccCCcceEEECCchhhcc
Confidence 333456799999995 655 999999999999875 77 9999999876322 223457999999998654
Q ss_pred -----hHHhhhhhhccC-CCcEEEecCCC--------CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcc
Q 044303 187 -----LPSQLSAAAFKL-DRKFSICLSSN--------GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAE 251 (428)
Q Consensus 187 -----~~~ql~~~~~~~-~~~FS~~L~~~--------G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~ 251 (428)
++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+
T Consensus 138 ~~~~~~~~~l~~-qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~ 200 (341)
T 3k1w_A 138 GRVTPIFDNIIS-QGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP--QHYEGNFHYINLIK--------------TGV 200 (341)
T ss_dssp GGCCCHHHHHHH-HTCBSSSEEEEEECCCC-----CCEEEEESSCCG--GGEEEEEEEEECSS--------------TTS
T ss_pred cCCCCHHHHHHH-CCCCCCCEEEEEEeCCCCcCCCCCCEEEECccCh--HHccCceEEEecCC--------------CCE
Confidence 6778888 7666 68999999763 8999999983 245 8999999974 468
Q ss_pred eEEEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCC
Q 044303 252 YFIGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFI 331 (428)
Q Consensus 252 y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~ 331 (428)
|.|.+++|+|+++.+..+. ...+||||||++++||++++++|.+++.+... ... ...+|...
T Consensus 201 w~v~l~~i~v~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~g--~~~~C~~~--- 262 (341)
T 3k1w_A 201 WQIQMKGVSVGSSTLLCED---------GCLALVDTGASYISGSTSSIEKLMEALGAKKR----LFD--YVVKCNEG--- 262 (341)
T ss_dssp CEEEECCEEETTEEEECTT---------CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----SSC--EEEEGGGG---
T ss_pred EEEEEeEEEECCEEeecCC---------CCEEEEECCCChhcCCHHHHHHHHHHcCCeec----CCC--eEEeCCCC---
Confidence 9999999999998754321 35799999999999999999999999865431 111 33457654
Q ss_pred CCCCcCCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEE-EEEeCCC--CCCCceeechhhhcceEEEEeCCCCEE
Q 044303 332 GSTHVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCL-AFVDGGV--NPTTSIVIGAYQLEDNLLQFDLAKSRL 406 (428)
Q Consensus 332 ~~~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rI 406 (428)
..+|+|+|+|+| ++++|++++|+++... +..|+ ++...+. ...+.||||+.|||++|+|||++++||
T Consensus 263 ------~~~p~i~f~f~g--~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~i 334 (341)
T 3k1w_A 263 ------PTLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRI 334 (341)
T ss_dssp ------GGCCCEEEEETT--EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEE
T ss_pred ------CcCCcEEEEECC--EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEE
Confidence 368999999997 9999999999987543 57899 4555321 124679999999999999999999999
Q ss_pred EEeecC
Q 044303 407 GFSSSL 412 (428)
Q Consensus 407 Gfa~~~ 412 (428)
|||+++
T Consensus 335 gfA~a~ 340 (341)
T 3k1w_A 335 GFALAR 340 (341)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999864
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.7e-52 Score=406.59 Aligned_cols=306 Identities=17% Similarity=0.136 Sum_probs=232.8
Q ss_pred EEEEe-eCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCC
Q 044303 33 VVPVT-KDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGC 111 (428)
Q Consensus 33 ~~Pl~-~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~ 111 (428)
.+|+. ....+.+|+++|.||||+|++.|+|||||+++||+|.+|. .| .| .+..+++. .++++
T Consensus 4 ~v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--------~~---~~-~~~~y~~~-----~SsT~ 66 (329)
T 1oew_A 4 SATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT--------AS---EV-XQTIYTPS-----KSTTA 66 (329)
T ss_dssp EEEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--------GG---GC--CCCBCGG-----GCTTC
T ss_pred eeEeeecCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC--------cc---cc-ccCccCCc-----cCccc
Confidence 34555 4446789999999999999999999999999999998762 12 34 33334432 12233
Q ss_pred CC-CCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc---
Q 044303 112 NN-NTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS--- 186 (428)
Q Consensus 112 ~~-~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S--- 186 (428)
.. +.|.|.+.|+ +|+.++|.+++|+|+|++. +++++.|||++....... ....+||||||++..+
T Consensus 67 ~~~~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 136 (329)
T 1oew_A 67 KLLSGATWSISYG-DGSSSSGDVYTDTVSVGGL---------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVS 136 (329)
T ss_dssp EEEEEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCB
T ss_pred eecCCCeEEEEeC-CCCcEEEEEEEEEEEECCE---------EEeeeEEEEEEecCccccccCCCceEEEeccccccccC
Confidence 33 4689999996 8888999999999999875 788999999987632111 1357999999997644
Q ss_pred ------hHHhhhhhhccCCCcEEEecCCC--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEe
Q 044303 187 ------LPSQLSAAAFKLDRKFSICLSSN--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVK 257 (428)
Q Consensus 187 ------~~~ql~~~~~~~~~~FS~~L~~~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~ 257 (428)
+..+|.+ + +.+++||+||.++ |.|+|||+|. .++ |++.|+|+... ..+|.|.++
T Consensus 137 ~~~~~~~~~~l~~-~-i~~~~FS~~L~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~~~v~l~ 199 (329)
T 1oew_A 137 PTQQKTFFDNAKA-S-LDSPVFTADLGYHAPGTYNFGFIDT--TAYTGSITYTAVSTK-------------QGFWEWTST 199 (329)
T ss_dssp SSCCCCHHHHHTT-T-SSSSEEEEECCSSSCEEEEESCCCT--TSSSSCCEEEECBCT-------------TSSCEEEEE
T ss_pred cCCCCCHHHHHHH-h-ccCcEEEEEccCCCCeEEEEeccCh--HhcccceEEEEccCC-------------CceEEEEEe
Confidence 5567765 4 3468999999986 9999999983 245 89999999753 468999999
Q ss_pred EEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcC
Q 044303 258 SILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVG 337 (428)
Q Consensus 258 ~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 337 (428)
+|+|+++.+... ...+||||||++++||+++|++|.+++..... ... ......+|+
T Consensus 200 ~i~v~~~~~~~~----------~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~--~~~-~g~~~~~C~----------- 255 (329)
T 1oew_A 200 GYAVGSGTFKST----------SIDGIADTGTTLLYLPATVVSAYWAQVSGAKS--SSS-VGGYVFPCS----------- 255 (329)
T ss_dssp EEEETTSCCEEE----------EEEEEECTTCCSEEECHHHHHHHHTTSTTCEE--ETT-TTEEEEETT-----------
T ss_pred eEEECCeeccCC----------CceEEEeCCCCCEECCHHHHHHHHHhCCCcEE--cCC-CCEEEEECC-----------
Confidence 999999765311 24699999999999999999999887733211 111 111124576
Q ss_pred CCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEEEE-EeCCCCCCCceeechhhhcceEEEEeC-CCCEEEEee
Q 044303 338 AAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCLAF-VDGGVNPTTSIVIGAYQLEDNLLQFDL-AKSRLGFSS 410 (428)
Q Consensus 338 ~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~~~-~~~~~~~~~~~ILG~~flr~~yvvFD~-e~~rIGfa~ 410 (428)
..+|+|+|+|+| ++++||+++|++...+ ...|++. ..... .+.||||+.|||++|+|||+ +++|||||+
T Consensus 256 ~~~P~i~f~fgg--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~riGfA~ 328 (329)
T 1oew_A 256 ATLPSFTFGVGS--ARIVIPGDYIDFGPISTGSSSCFGGIQSSAG--IGINIFGDVALKAAFVVFNGATTPTLGFAS 328 (329)
T ss_dssp CCCCCEEEEETT--EEEEECHHHHEEEESSTTCSEEEESEEESTT--TSSEEECHHHHTTEEEEEECSSSCEEEEEE
T ss_pred CCCCcEEEEECC--EEEEECHHHeeeeecCCCCCeEEEEEEeCCC--CCceEEChHHhcCEEEEEECCCCceEEEec
Confidence 257999999965 9999999999987532 4789974 44432 36899999999999999999 999999997
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.4e-52 Score=414.41 Aligned_cols=306 Identities=14% Similarity=0.213 Sum_probs=243.4
Q ss_pred CceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCC
Q 044303 30 KALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGP 109 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~ 109 (428)
....+||.+ ..+.+|+++|.||||+|++.|+|||||+++||+|..| .+..|..+..+++. .++
T Consensus 50 ~~~~~pl~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~y~~~-----~Ss 112 (375)
T 1miq_A 50 ENDVIELDD-VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKC-----------NSSGCSIKNLYDSS-----KSK 112 (375)
T ss_dssp TTBCCCGGG-TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTC-----------CSSGGGGSCCBCGG-----GCT
T ss_pred CcceEEccc-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCC-----------CcccccCCCcCCCc-----cCC
Confidence 345678886 3578999999999999999999999999999999755 44567766666654 233
Q ss_pred CCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEecccc----ccccCcCCCcceEEecCCCCC
Q 044303 110 GCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGAT----FLLEGLASGFQGMAGLGRNKV 185 (428)
Q Consensus 110 ~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~GIlGLg~~~~ 185 (428)
++....|.|.+.|+ +|+ +.|.+++|+|+|++. ++++ .|||++. +. .......+||||||++..
T Consensus 113 T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~ 179 (375)
T 1miq_A 113 SYEKDGTKVDITYG-SGT-VKGFFSKDLVTLGHL---------SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDL 179 (375)
T ss_dssp TCEEEEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCT
T ss_pred ceEECCcEEEEEeC-CCe-EEEEEEEEEEEEcCc---------eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcc
Confidence 34456799999995 655 899999999999875 7888 9999987 42 111245799999999865
Q ss_pred c------hHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceE
Q 044303 186 S------LPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYF 253 (428)
Q Consensus 186 S------~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~ 253 (428)
+ ++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.
T Consensus 180 s~~~~~~~~~~l~~-qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~w~ 242 (375)
T 1miq_A 180 SIGSIDPIVVELKN-QNKIDNALFTFYLPVHDVHAGYLTIGGIEE--KFYEGNITYEKLNH--------------DLYWQ 242 (375)
T ss_dssp TCSSCCCHHHHHHH-TTSSSSSEEEEECCTTCTTEEEEEESSCCG--GGEEEEEEEEEBSS--------------SSSSE
T ss_pred cccCCCCHHHHHHh-ccCcCCCEEEEEecCCCCCCeEEEEcccCH--HHcCCceEEEecCC--------------CceEE
Confidence 4 6678887 7766 68999999885 9999999983 234 8999999964 46999
Q ss_pred EEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCC
Q 044303 254 IGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGS 333 (428)
Q Consensus 254 v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~ 333 (428)
|.++ |+|+++.+ . ...+||||||++++||+++|++|.+++.+... ... .....+|+. .
T Consensus 243 v~l~-i~v~g~~~--~----------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~---~~~-g~~~~~C~~-~---- 300 (375)
T 1miq_A 243 IDLD-VHFGKQTM--E----------KANVIVDSGTTTITAPSEFLNKFFANLNVIKV---PFL-PFYVTTCDN-K---- 300 (375)
T ss_dssp EEEE-EEETTEEE--E----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC---TTS-SCEEEETTC-T----
T ss_pred EEEE-EEECCEEc--c----------cceEEecCCCccEEcCHHHHHHHHHHhCCccc---CCC-CeEEEECCC-C----
Confidence 9999 99999886 1 24699999999999999999999999865421 111 123356875 1
Q ss_pred CCcCCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEE-EEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEee
Q 044303 334 THVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCL-AFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSS 410 (428)
Q Consensus 334 ~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~ 410 (428)
.+|+|+|+|+| ++++|++++|+++... +..|+ ++..... ..+.||||++|||++|+|||++++|||||+
T Consensus 301 -----~~P~i~f~f~g--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~riGfA~ 372 (375)
T 1miq_A 301 -----EMPTLEFKSAN--NTYTLEPEYYMNPILEVDDTLCMITMLPVDI-DSNTFILGDPFMRKYFTVFDYDKESVGFAI 372 (375)
T ss_dssp -----TCCCEEEECSS--CEEEECGGGSEEESSSSSCSEEEESEEECCS-SSSEEEECHHHHHHEEEEEETTTTEEEEEE
T ss_pred -----CCCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCC-CCCcEEECHHHhccEEEEEECCCCEEEEEE
Confidence 68999999976 9999999999998752 45898 6766543 126899999999999999999999999998
Q ss_pred cC
Q 044303 411 SL 412 (428)
Q Consensus 411 ~~ 412 (428)
+.
T Consensus 373 ~~ 374 (375)
T 1miq_A 373 AK 374 (375)
T ss_dssp EC
T ss_pred cC
Confidence 53
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=6.8e-51 Score=396.96 Aligned_cols=304 Identities=14% Similarity=0.132 Sum_probs=234.1
Q ss_pred EEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCC
Q 044303 34 VPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNN 113 (428)
Q Consensus 34 ~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~ 113 (428)
+|+.....+.+|+++|.|| +|++.|+|||||+++||+|.+| .+..|..+..+++.. ++ +..
T Consensus 5 v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~c~~~~~y~~~~-----Ss-~~~ 65 (325)
T 1ibq_A 5 AVTTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDEL-----------PSSEQTGHDLYTPSS-----SA-TKL 65 (325)
T ss_dssp EEEEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTS-----------CHHHHTTSCCCBCCS-----SC-EEC
T ss_pred EEeEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCC-----------CccccCCCCCCCchh-----cC-Ccc
Confidence 4444444678999999999 8999999999999999999876 222455555555431 11 233
Q ss_pred CCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcC-CCcceEEecCCCCCc------
Q 044303 114 NTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLA-SGFQGMAGLGRNKVS------ 186 (428)
Q Consensus 114 ~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~-~~~~GIlGLg~~~~S------ 186 (428)
+.|.|.+.|+ +|+.+.|.+++|+|+|++. +++++.|||++........ ...+||||||++..+
T Consensus 66 ~~~~~~i~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~ 135 (325)
T 1ibq_A 66 SGYSWDISYG-DGSSASGDVYRDTVTVGGV---------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKA 135 (325)
T ss_dssp TTCBEEEECS-SSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSC
T ss_pred CCCEEEEEeC-CCCEEEEEEEEeEEEECCE---------EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCC
Confidence 5799999996 8888999999999999875 7889999999876322111 367999999997654
Q ss_pred ---hHHhhhhhhccCCCcEEEecCCC--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEE
Q 044303 187 ---LPSQLSAAAFKLDRKFSICLSSN--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSIL 260 (428)
Q Consensus 187 ---~~~ql~~~~~~~~~~FS~~L~~~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~ 260 (428)
+..+|.+ + +.+++||+||.++ |.|+|||+|. .++ |++.|+|+... ..+|.|.+++|+
T Consensus 136 ~~~~~~~l~~-~-i~~~~FS~~l~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~w~v~l~~i~ 198 (325)
T 1ibq_A 136 QTTFFDTVKS-Q-LDSPLFAVQLKHDAPGVYDFGYIDD--SKYTGSITYTDADSS-------------QGYWGFSTDGYS 198 (325)
T ss_dssp CCCHHHHHGG-G-SSSSEEEEEEETTEEEEEEESSCCG--GGBSSCCEEEECBCT-------------TSSCEEEECEEE
T ss_pred CCCHHHHHHH-h-cCCcEEEEEecCCCCceEEECCcCh--hhccCceEEEEcCCC-------------CceEEEEECcEE
Confidence 5578876 5 4478999999987 9999999983 234 89999999753 468999999999
Q ss_pred EcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCCCC
Q 044303 261 ISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGAAA 340 (428)
Q Consensus 261 v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 340 (428)
|+++.+.. ....+||||||++++||+++|++|.+++.... +.... .....+|+ ..+
T Consensus 199 v~~~~~~~----------~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~--~~~~~-g~~~~~C~-----------~~~ 254 (325)
T 1ibq_A 199 IGDGSSSS----------SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ--ESYEA-GGYVFSCS-----------TDL 254 (325)
T ss_dssp ETTSCCBS----------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCB--CCSSS-SSCEEETT-----------CCC
T ss_pred ECCeeccC----------CCceEEEeCCCCcEeCCHHHHHHHHHhCCCce--EcCcC-CeEEEEcC-----------CCC
Confidence 99986531 13579999999999999999999988874321 11111 11223576 257
Q ss_pred CeEEEEEcCCceEEEEeccccEEEeCC--CeEEEE-EEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 341 PEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCLA-FVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 341 P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
|+|+|+|+| ++++||+++|++...+ ...|++ +..... .+.||||+.|||++|+|||++++|||||++
T Consensus 255 P~i~f~fgg--~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 255 PDFTVVIGD--YKAVVPGKYINYAPVSTGSSTCYGGIQSNSG--LGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp CCEEEEETT--EEEEECHHHHEEEESSTTCSEEEESEEECTT--TCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CcEEEEECC--EEEEECHHHhcccccCCCCCeEEEEEEcCCC--CCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 999999976 9999999999987633 378997 444432 357999999999999999999999999984
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.1e-51 Score=415.23 Aligned_cols=327 Identities=17% Similarity=0.233 Sum_probs=242.5
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPG 110 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~ 110 (428)
...+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|..|.. +..|..+..+++. .+++
T Consensus 41 ~~~~~l~n~-~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~----------~~~C~~~~~y~~~-----~SsT 104 (478)
T 1qdm_A 41 GDIVALKNY-MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYF----------SIACYLHSRYKAG-----ASST 104 (478)
T ss_dssp SCSGGGCCG-GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCS----------CGGGGGSCCBCGG-----GCTT
T ss_pred CceEEeEec-cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCC----------CccccCCCCCCcc-----cCCC
Confidence 445777764 56899999999999999999999999999999987631 2356655555543 2234
Q ss_pred CCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccC-cCCCcceEEecCCCCCch--
Q 044303 111 CNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEG-LASGFQGMAGLGRNKVSL-- 187 (428)
Q Consensus 111 ~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~-~~~~~~GIlGLg~~~~S~-- 187 (428)
+....|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++.+.... .....+||||||++.++.
T Consensus 105 ~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~ 173 (478)
T 1qdm_A 105 YKKNGKPAAIQYG-TGS-IAGYFSEDSVTVGDL---------VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGK 173 (478)
T ss_dssp CBCCCCEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGG
T ss_pred eeeCCcEEEEEcC-CCC-eEEEEEEEEEEECCe---------EECCEEEEEEEecCCcccccccccceecccccccccCC
Confidence 4557789999995 654 899999999999875 78899999998753211 124579999999987663
Q ss_pred ----HHhhhhhhccC-CCcEEEecCCC------CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEE
Q 044303 188 ----PSQLSAAAFKL-DRKFSICLSSN------GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIG 255 (428)
Q Consensus 188 ----~~ql~~~~~~~-~~~FS~~L~~~------G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~ 255 (428)
..+|.+ ++.+ +++||+||.++ |.|+|||+|. .++ |++.|+|+.. ..+|.|.
T Consensus 174 ~~p~~~~l~~-qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~--~~~~G~l~~~pv~~--------------~~~w~v~ 236 (478)
T 1qdm_A 174 AVPVWYKMIE-QGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDP--KHYVGEHTYVPVTQ--------------KGYWQFD 236 (478)
T ss_dssp CCCHHHHHTT-TTCCSSSEEEEECCCC-----CEEEEETCCCT--TSEEEEEEEEEEEE--------------ETTEEEE
T ss_pred CCcHHHHHHH-CCCCCCCEEEEEeecCCCCCCCeEEEeCCcCH--hhcCCCceEEeccC--------------CCeEEEE
Confidence 456776 6666 68999999873 9999999983 245 8999999975 3699999
Q ss_pred EeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhc----------------------cCC
Q 044303 256 VKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSY----------------------SNI 313 (428)
Q Consensus 256 l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~----------------------~~~ 313 (428)
+++|.|+++.+.+.. +...+||||||+++++|+++|++|.++|.+.. .+.
T Consensus 237 l~~i~v~g~~~~~~~--------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~ 308 (478)
T 1qdm_A 237 MGDVLVGGKSTGFCA--------GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAET 308 (478)
T ss_dssp ECCEEETTEECSTTT--------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTC
T ss_pred EeEEEECCEEEeecC--------CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhcc
Confidence 999999998865432 24579999999999999999999999886421 000
Q ss_pred CC-------------------------CCC-------C-------------------------------CCCccceecCC
Q 044303 314 PR-------------------------VKP-------M-------------------------------APFGACFNSSF 330 (428)
Q Consensus 314 ~~-------------------------~~~-------~-------------------------------~~~~~C~~~~~ 330 (428)
+. ++. . .....|+..+.
T Consensus 309 ~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~ 388 (478)
T 1qdm_A 309 QPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPS 388 (478)
T ss_dssp CHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCC
T ss_pred ChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCC
Confidence 00 000 0 00012433321
Q ss_pred CCC-C--C--cCCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEEE-EEeCCC--CCCCceeechhhhcceEEEEe
Q 044303 331 IGS-T--H--VGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCLA-FVDGGV--NPTTSIVIGAYQLEDNLLQFD 400 (428)
Q Consensus 331 ~~~-~--~--~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~--~~~~~~ILG~~flr~~yvvFD 400 (428)
... . + ....+|+|+|+|+| +.|+|+|++|+++..+ +..|++ +...+. ..++.||||+.|||++|+|||
T Consensus 389 ~~g~~~v~C~~~~~lP~i~f~~gg--~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD 466 (478)
T 1qdm_A 389 PMGESAVDCGSLGSMPDIEFTIGG--KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFD 466 (478)
T ss_dssp SSSCCEECGGGGTTCCCEEEEETT--EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEE
T ss_pred CCCeEEeecccccccccEEEEECC--EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEE
Confidence 100 0 0 01468999999987 9999999999998764 358985 554331 124689999999999999999
Q ss_pred CCCCEEEEeec
Q 044303 401 LAKSRLGFSSS 411 (428)
Q Consensus 401 ~e~~rIGfa~~ 411 (428)
++++|||||++
T Consensus 467 ~~~~rIGfA~a 477 (478)
T 1qdm_A 467 YGKLRIGFAKA 477 (478)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCEEEEEeC
Confidence 99999999984
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3e-51 Score=400.27 Aligned_cols=304 Identities=13% Similarity=0.127 Sum_probs=237.1
Q ss_pred eEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCccc--CCCCCCCccCCCCCCCC
Q 044303 32 LVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQC--KIAGSESCVESCLPKGP 109 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C--~~~~~~~c~~~~~~~~~ 109 (428)
+..||.+. .+..|+++|.|| +|+++|+|||||+++||+|..| .+..| ..+..+++. .+
T Consensus 7 ~~~~l~n~-~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~C~~~~~~~y~~~-----~S- 66 (330)
T 1yg9_A 7 LYKLVHVF-INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQEC-----------VGGACVCPNLQKYEKL-----KP- 66 (330)
T ss_dssp SCSCEEEE-ECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTC-----------CSGGGGSTTCCCCCCS-----SC-
T ss_pred eEeeeecC-CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCC-----------CCccCcccccCccCCC-----CC-
Confidence 45677752 467999999999 8999999999999999999765 34456 555555543 12
Q ss_pred CCCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCCCc---
Q 044303 110 GCNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNKVS--- 186 (428)
Q Consensus 110 ~~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~~S--- 186 (428)
++....|.|.+.|+ +|+ +.|.+++|+|++++. +++++.|||++...........+||||||++..+
T Consensus 67 T~~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 67 KYISDGNVQVKFFD-TGS-AVGRGIEDSLTISQL---------TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp EEEEEEEEEEEETT-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTT
T ss_pred ceEECCCEEEEEEC-Cce-EEEEEEEEEEEECCE---------EEcCeEEEEEEEcccccccccCceEEEcCcchhcccc
Confidence 33345688999995 654 599999999999875 7889999999876211112357999999998766
Q ss_pred ----hHHhhhhhhccCCCcEEEecCCC------CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEE
Q 044303 187 ----LPSQLSAAAFKLDRKFSICLSSN------GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIG 255 (428)
Q Consensus 187 ----~~~ql~~~~~~~~~~FS~~L~~~------G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~ 255 (428)
++.+|.+ ++.++++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.
T Consensus 136 ~~~~~~~~l~~-qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~w~v~ 198 (330)
T 1yg9_A 136 KGKTVLENFVE-ENLIAPVFSIHHARFQDGEHFGEIIFGGSDW--KYVDGEFTYVPLVG--------------DDSWKFR 198 (330)
T ss_dssp SCCCHHHHHHH-TTSSCSEEEEEEEECTTSCEEEEEEETSCCG--GGEEEEEEEEEBSC--------------TTSCCEE
T ss_pred CCCCHHHHHHh-cCCCCceEEEEEcCCCCCCCCCEEEECCcCH--HHccCceEEEECCC--------------CCEEEEE
Confidence 7788888 665588999999753 8999999983 234 8999999973 4699999
Q ss_pred EeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCC-CccceecCCCCCC
Q 044303 256 VKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAP-FGACFNSSFIGST 334 (428)
Q Consensus 256 l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~C~~~~~~~~~ 334 (428)
+++|+|+++.+. . ....+||||||++++||+++|++|.+++.+... ....... ..+|+..
T Consensus 199 l~~i~v~~~~~~-~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~---~~g~~~~~~~~C~~~------ 259 (330)
T 1yg9_A 199 LDGVKIGDTTVA-P---------AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE---KTTTRRICKLDCSKI------ 259 (330)
T ss_dssp CSEEEETTEEEE-C---------TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE---ECSSCEEEEECGGGG------
T ss_pred eCeEEECCEEEc-C---------CCcEEEEecCCccccCCHHHHHHHHHHhCCccc---CCCceEEEEEECCCc------
Confidence 999999998764 1 136799999999999999999999999865421 0000012 3457653
Q ss_pred CcCCCCCeEEEEEcCCceEEEEeccccEEEeCCCeEEE-EEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 335 HVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGKHAMCL-AFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 335 ~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
..+|+|+|+|+| ++++||+++|+++. +..|+ ++..... .+.||||+.|||++|+|||++++|||||++
T Consensus 260 ---~~~p~i~f~fgg--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfA~~ 328 (330)
T 1yg9_A 260 ---PSLPDVTFVING--RNFNISSQYYIQQN--GNLCYSGFQPCGH--SDHFFIGDFFVDHYYSEFNWENKTMGFGRS 328 (330)
T ss_dssp ---GGSCCEEEEETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ---cccCcEEEEECC--EEEEECHHHhcccC--CCcEEEEEEeCCC--CCeEEecHHHhhheEEEEECCCCEEEEEEC
Confidence 368999999976 99999999999987 56898 4554322 357999999999999999999999999984
No 25
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.1e-51 Score=411.85 Aligned_cols=304 Identities=14% Similarity=0.200 Sum_probs=239.3
Q ss_pred eEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCC
Q 044303 32 LVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGC 111 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~ 111 (428)
..+||... .+.+|+++|.||||||++.|+|||||+++||+|..| .+..|..+..+++. .++++
T Consensus 128 ~~~~L~n~-~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C-----------~~~~C~~~~~ydps-----~SsT~ 190 (453)
T 2bju_A 128 DNIELVDF-QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-----------TTAGCLTKHLYDSS-----KSRTY 190 (453)
T ss_dssp EEEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSTTGGGSCCBCGG-----GCTTC
T ss_pred CceeeEec-CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCC-----------CccccCCCCcCCCc-----cCCce
Confidence 46888853 578999999999999999999999999999999765 34567666656554 23344
Q ss_pred CCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEecccccc--ccCc-CCCcceEEecCCCCC---
Q 044303 112 NNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFL--LEGL-ASGFQGMAGLGRNKV--- 185 (428)
Q Consensus 112 ~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~--~~~~-~~~~~GIlGLg~~~~--- 185 (428)
....|.|.+.|+ +|+ ++|.+++|+|++++. +++ +.|||++... +..+ ....+||||||++..
T Consensus 191 ~~~~~~~~i~Yg-dGs-~~G~~~~Dtv~ig~~---------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~ 258 (453)
T 2bju_A 191 EKDGTKVEMNYV-SGT-VSGFFSKDLVTVGNL---------SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIG 258 (453)
T ss_dssp EEEEEEEEEECS-SSE-EEEEEEEEEEEETTE---------EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTT
T ss_pred eECCcEEEEEcC-CCC-eEEEEEEEEEEEeCc---------EEE-EEEEEEEEecccCccccccCCceeEeccCCccccc
Confidence 556799999995 665 899999999999875 788 9999998863 2111 245799999998754
Q ss_pred ---chHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEE
Q 044303 186 ---SLPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGV 256 (428)
Q Consensus 186 ---S~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l 256 (428)
+++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.+
T Consensus 259 ~~~~~~~~L~~-qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~--~~y~G~l~~~pv~~--------------~~~w~V~l 321 (453)
T 2bju_A 259 SVDPIVVELKN-QNKIENALFTFYLPVHDKHTGFLTIGGIEE--RFYEGPLTYEKLNH--------------DLYWQITL 321 (453)
T ss_dssp CCCCHHHHHHH-TTSSSSCEEEEECCBTTTBCEEEEESSCCG--GGEEEEEEEEEEEE--------------ETTEEEEE
T ss_pred CCCcHHHHHHH-CCCCCCCEEEEEeCCCCCCCeEEEECCCCH--HHcCCceEEEecCC--------------CceEEEEE
Confidence 35678887 7766 68999999874 9999999983 234 8999999975 36999999
Q ss_pred eEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCc
Q 044303 257 KSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHV 336 (428)
Q Consensus 257 ~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 336 (428)
+ |+|++ .+. . ...+||||||++++||+++|++|.+++.+.. .........+|+.
T Consensus 322 ~-I~Vgg-~~~---~--------~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~----~~~g~~~~v~C~~--------- 375 (453)
T 2bju_A 322 D-AHVGN-IML---E--------KANCIVDSGTSAITVPTDFLNKMLQNLDVIK----VPFLPFYVTLCNN--------- 375 (453)
T ss_dssp E-EEETT-EEE---E--------EEEEEECTTCCSEEECHHHHHHHTTTSSCEE----CTTSSCEEEETTC---------
T ss_pred E-EEECc-EEe---c--------cccEEEcCCCCeEecCHHHHHHHHHHhCCcc----cCCCceEEEecCC---------
Confidence 9 99999 331 1 3569999999999999999999988775421 1111122356765
Q ss_pred CCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEE-EEEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 337 GAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCL-AFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 337 ~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
..+|+|+|+|+| ++++|||++|+++... +..|+ ++...+. ..+.||||++|||++|+|||++++|||||+.
T Consensus 376 -~~~P~itf~fgg--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~-~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~ 449 (453)
T 2bju_A 376 -SKLPTFEFTSEN--GKYTLEPEYYLQHIEDVGPGLCMLNIIGLDF-PVPTFILGDPFMRKYFTVFDYDNHSVGIALA 449 (453)
T ss_dssp -TTCCCEEEECSS--CEEEECHHHHEEECTTTSTTEEEECEEECCC-SSCEEEECHHHHHHEEEEEETTTTEEEEEEE
T ss_pred -CCCCcEEEEECC--EEEEECHHHhEeecccCCCceEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEEEc
Confidence 168999999987 9999999999998753 46898 5665542 2358999999999999999999999999985
No 26
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=4.3e-51 Score=412.86 Aligned_cols=306 Identities=14% Similarity=0.180 Sum_probs=240.4
Q ss_pred ceEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCC
Q 044303 31 ALVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPG 110 (428)
Q Consensus 31 ~~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~ 110 (428)
...+||.+. .+.+|+++|.||||||++.|+|||||+++||+|..| .+..|..+..+++. .+++
T Consensus 126 ~~~~pL~n~-~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C-----------~s~~C~~~~~ydps-----~SsT 188 (451)
T 3qvc_A 126 FDNVELKDL-ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKC-----------TSESCESKNHYDSS-----KSKT 188 (451)
T ss_dssp -CCCCGGGG-BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTC-----------CSGGGTTSCCBCGG-----GCTT
T ss_pred CCccceeec-CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC-----------CccccCCCCCCCCC-----CCcc
Confidence 446677763 478999999999999999999999999999999754 44567766666654 2233
Q ss_pred CCCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEecccc----ccccCcCCCcceEEecCCCCC-
Q 044303 111 CNNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGAT----FLLEGLASGFQGMAGLGRNKV- 185 (428)
Q Consensus 111 ~~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~GIlGLg~~~~- 185 (428)
+....|.|.+.|+ +|+ +.|.+++|+|++++. +++ +.|||++. ... ......+||||||++..
T Consensus 189 ~~~~~~~f~i~Yg-dGs-~~G~~~~Dtv~igg~---------~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s 255 (451)
T 3qvc_A 189 YEKDDTPVKLTSK-AGT-ISGIFSKDLVTIGKL---------SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLS 255 (451)
T ss_dssp CEEEEEEEEEECS-SEE-EEEEEEEEEEEETTE---------EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSS
T ss_pred cccCCCEEEEEEC-CCE-EEEEEEEEEEEECCE---------EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCccc
Confidence 3456789999995 665 999999999999875 788 99999987 422 11235799999998754
Q ss_pred -----chHHhhhhhhccC-CCcEEEecCCC----CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEE
Q 044303 186 -----SLPSQLSAAAFKL-DRKFSICLSSN----GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFI 254 (428)
Q Consensus 186 -----S~~~ql~~~~~~~-~~~FS~~L~~~----G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v 254 (428)
+++.+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|
T Consensus 256 ~~~~~~~~~~L~~-qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~--s~y~G~l~~~pv~~--------------~~~w~v 318 (451)
T 3qvc_A 256 IGSIDPYIVELKT-QNKIEQAVYSIYLPPENKNKGYLTIGGIEE--RFFDGPLNYEKLNH--------------DLMWQV 318 (451)
T ss_dssp SSCCCCHHHHHHH-TTSSSSSEEEEECCTTCTTEEEEEESSCCG--GGEEEEEEEEECSS--------------TTSSEE
T ss_pred ccCCCCHHHHHHH-cCCCCCCEEEEEEcCCCCCCCEEEECCcch--hhcCCceEEEEccc--------------CCeeEE
Confidence 57788988 7777 68999999975 9999999983 244 8999999974 469999
Q ss_pred EEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCC
Q 044303 255 GVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGST 334 (428)
Q Consensus 255 ~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 334 (428)
.++ |.|+++ .. ....+||||||++++||++++++|.+++.+... . .......+|. .
T Consensus 319 ~l~-I~Vgg~-~~-----------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~---~-~~g~y~v~C~-~------ 374 (451)
T 3qvc_A 319 DLD-VHFGNV-SS-----------KKANVILDSATSVITVPTEFFNQFVESASVFKV---P-FLSLYVTTCG-N------ 374 (451)
T ss_dssp EEE-EEETTE-EE-----------EEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC---T-TSSCEEEETT-C------
T ss_pred EEE-EEECCc-cC-----------CCceEEEeCCCccccCCHHHHHHHHHHcCCeec---C-CCCeEEeeCC-c------
Confidence 999 999998 11 135699999999999999999999988854421 1 0112224566 2
Q ss_pred CcCCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEEE-EEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 335 HVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCLA-FVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 335 ~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
..+|+|+|+|+| .+++||+++|+++..+ +..|+. +...+. ..+.||||++|||++|+|||++++|||||++
T Consensus 375 ---~~~P~itf~fgg--~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~-~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~a 448 (451)
T 3qvc_A 375 ---TKLPTLEYRSPN--KVYTLEPKQYLEPLENIFSALCMLNIVPIDL-EKNTFVLGDPFMRKYFTVYDYDNHTVGFALA 448 (451)
T ss_dssp ---TTCCCEEEEETT--EEEEECHHHHEEECTTTSTTEEEECEEECCC-STTEEEECHHHHHHEEEEEETTTTEEEEEEE
T ss_pred ---CcCCcEEEEECC--EEEEEcHHHheeecccCCCCeEEEEEEeCCC-CCCCEEECHHHhhcEEEEEECCCCEEEEEEc
Confidence 368999999997 9999999999998752 468884 555432 1368999999999999999999999999996
Q ss_pred Cc
Q 044303 412 LL 413 (428)
Q Consensus 412 ~~ 413 (428)
.+
T Consensus 449 k~ 450 (451)
T 3qvc_A 449 KN 450 (451)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 27
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1e-50 Score=395.24 Aligned_cols=296 Identities=16% Similarity=0.126 Sum_probs=228.8
Q ss_pred CCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCCCCCccee
Q 044303 41 STLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNNNTCTHFP 120 (428)
Q Consensus 41 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~~~c~~~~ 120 (428)
.+.+|+++|.|| +|+++|+|||||+++||+|.+| .+..|..+..+++.. + ++..+.|.|.+
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C-----------~~~~c~~~~~y~~~~-----S-s~~~~~~~~~i 73 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQT-----------PSSERSGHDYYTPGS-----S-AQKIDGATWSI 73 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTS-----------CHHHHTTCCCBCCCT-----T-CEEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCC-----------CcccccCCCCCCccc-----c-CCccCCCeEEE
Confidence 567999999999 7999999999999999999876 222455554454331 1 12235789999
Q ss_pred cCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc---------hHHh
Q 044303 121 GNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS---------LPSQ 190 (428)
Q Consensus 121 ~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S---------~~~q 190 (428)
.|+ +|+.+.|.+++|+|+|++. +++++.|||++....... ....+||||||++.++ +..+
T Consensus 74 ~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~ 143 (323)
T 1izd_A 74 SYG-DGSSASGDVYKDKVTVGGV---------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDN 143 (323)
T ss_dssp ECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred EcC-CCCeEEEEEEEEEEEECCE---------EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHH
Confidence 996 8888999999999999875 788999999997632211 1357999999997544 4567
Q ss_pred hhhhhccCCCcEEEecCCC--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEEEcCeEee
Q 044303 191 LSAAAFKLDRKFSICLSSN--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSILISGNVVP 267 (428)
Q Consensus 191 l~~~~~~~~~~FS~~L~~~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v~~~~l~ 267 (428)
|.+ + +.+++||+||.++ |.|+|||+|. .++ |++.|+|+... ..+|.|.+++|+|++ .+.
T Consensus 144 l~~-~-i~~~~FS~~L~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~w~v~l~~i~v~~-~~~ 205 (323)
T 1izd_A 144 VKS-S-LSEPIFAVALKHNAPGVYDFGYTDS--SKYTGSITYTDVDNS-------------QGFWGFTADGYSIGS-DSS 205 (323)
T ss_dssp HGG-G-SSSSEEEEECCTTSCEEEEESSCCT--TSEEEEEEEEECBCT-------------TSSCEEEESEEEETT-EEE
T ss_pred HHH-h-ccCcEEEEEccCCCCCEEEECCcCc--cccccceEEEECCCC-------------CceEEEEECeEEECC-ccc
Confidence 766 5 4468999999986 9999999983 245 89999999743 468999999999999 542
Q ss_pred ccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCCCCCeEEEEE
Q 044303 268 LNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGAAAPEIHLYM 347 (428)
Q Consensus 268 ~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f 347 (428)
. ....+||||||++++||+++|++|.+++.... +.... .....+|+ ..+|+|+|+|
T Consensus 206 ~----------~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~--~~~~~-g~~~~~C~-----------~~~P~i~f~f 261 (323)
T 1izd_A 206 S----------DSITGIADTGTTLLLLDDSIVDAYYEQVNGAS--YDSSQ-GGYVFPSS-----------ASLPDFSVTI 261 (323)
T ss_dssp C----------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCE--EETTT-TEEEEETT-----------CCCCCEEEEE
T ss_pred C----------CCceEEEeCCCcceeCCHHHHHHHHHhCCCcE--EcCcC-CEEEEECC-----------CCCceEEEEE
Confidence 1 13579999999999999999999988874221 11111 11123565 2579999999
Q ss_pred cCCceEEEEeccccEEEeCCCeEEEE-EEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 348 PGTNRMWKIFGAHSMVRVGKHAMCLA-FVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 348 ~g~~~~~~i~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
+| ++++||+++|++...++..|++ +..... .+.||||+.|||++|+|||++++|||||++
T Consensus 262 gg--~~~~i~~~~~~~~~~~~~~C~~~i~~~~~--~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 262 GD--YTATVPGEYISFADVGNGQTFGGIQSNSG--IGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp TT--EEEEECHHHHEEEECSTTEEEESEEECTT--TSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred CC--EEEecCHHHeEEecCCCCeEEEEEEcCCC--CCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 66 9999999999988755679997 555432 357999999999999999999999999984
No 28
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.2e-50 Score=392.70 Aligned_cols=296 Identities=16% Similarity=0.226 Sum_probs=228.5
Q ss_pred eEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCC
Q 044303 32 LVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGC 111 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~ 111 (428)
-.+||.+. +..|+++|.||||+|++.|+|||||+++||+|.+.+.++ .++
T Consensus 3 ~~~~l~n~--~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~~y~~s----------------------------~Ss 52 (340)
T 1wkr_A 3 GSVPATNQ--LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKT----------------------------STS 52 (340)
T ss_dssp EEEEEEEC--SSCEEEEEEETTTTEEEEEEEETTCCCCEECSSSCCCCC----------------------------TTC
T ss_pred ccEeeecc--CcEEEEEEEECCCCcEEEEEEeCCChhheecCCCccCCc----------------------------CCc
Confidence 36899984 579999999999999999999999999999985322110 001
Q ss_pred CCCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcCCCcceEEecCCCCCc-----
Q 044303 112 NNNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLASGFQGMAGLGRNKVS----- 186 (428)
Q Consensus 112 ~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~GIlGLg~~~~S----- 186 (428)
+...|.|.+.|+ +|+ ++|.+++|+|+|++. +++++.|||++... ++ ...+||||||++.++
T Consensus 53 ~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~~g~~---------~v~~~~fg~~~~~~--~~-~~~~GilGLg~~~~s~~~~~ 118 (340)
T 1wkr_A 53 SATSDKVSVTYG-SGS-FSGTEYTDTVTLGSL---------TIPKQSIGVASRDS--GF-DGVDGILGVGPVDLTVGTLS 118 (340)
T ss_dssp EEEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEEE--SC-TTCSEEEECSCGGGGTTSEE
T ss_pred cccCceEEEEEC-CcE-EEEEEEEEEEEECCE---------EEcceEEEEEEccC--CC-cCCCcEEECCcccccccccc
Confidence 234688999996 665 899999999999875 78899999999863 32 368999999987654
Q ss_pred ---------hHHhhhhhhccC-CCcEEEecCC----C---CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCC
Q 044303 187 ---------LPSQLSAAAFKL-DRKFSICLSS----N---GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGES 248 (428)
Q Consensus 187 ---------~~~ql~~~~~~~-~~~FS~~L~~----~---G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~ 248 (428)
++.+|.+ ++.+ +++||+||.+ . |.|+|||+|. .++ |++.|+|+..+.. .
T Consensus 119 ~~~~~~~~~~~~~l~~-~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~~~----------~ 185 (340)
T 1wkr_A 119 PHTSTSIPTVTDNLFS-QGTIPTNLLAVSFEPTTSESSTNGELTFGATDS--SKYTGSITYTPITSTSP----------A 185 (340)
T ss_dssp SCTTCCCCCHHHHHHH-TTSSSSSEEEEECCCCSSSSEEEEEEEESSCCG--GGCSSCCEEEECCSSTT----------G
T ss_pred ccccccCCCHHHHHHH-cCCCCCCEEEEEecCCCCCCCCCcEEEEcccCh--hhcccceEEEECccCCC----------C
Confidence 4567777 7766 6899999985 2 9999999983 244 8999999987531 2
Q ss_pred CcceEEEEeEEEEcC-eEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCcccee
Q 044303 249 SAEYFIGVKSILISG-NVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFN 327 (428)
Q Consensus 249 ~~~y~v~l~~i~v~~-~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~ 327 (428)
..+|.|. .+|+|++ +.+.. ...+||||||++++||+++|++|.+++.+... . .......+|..
T Consensus 186 ~~~w~v~-~~i~v~~~~~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~-~~g~~~~~C~~ 249 (340)
T 1wkr_A 186 SAYWGIN-QSIRYGSSTSILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD---N-NTGLLRLTTAQ 249 (340)
T ss_dssp GGSSEEE-EEEEETTTEEEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC---T-TTSSEEECHHH
T ss_pred cceEEEE-eeEEECCCeEccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc---C-CCCeEEeeccc
Confidence 5799999 9999998 77642 13689999999999999999999888865432 1 11112346765
Q ss_pred cCCCCCCCcCCCCCeEEEEEcCCceEEEEeccccEEEeC-------CCeEEE-EEEeCCCC--CCCceeechhhhcceEE
Q 044303 328 SSFIGSTHVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVG-------KHAMCL-AFVDGGVN--PTTSIVIGAYQLEDNLL 397 (428)
Q Consensus 328 ~~~~~~~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~-------~~~~C~-~~~~~~~~--~~~~~ILG~~flr~~yv 397 (428)
. ..+|+|+|+|+| .+++|+|++|+++.. +...|. ++...... .+..||||+.|||++|+
T Consensus 250 ~---------~~~p~i~f~f~g--~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~ 318 (340)
T 1wkr_A 250 Y---------ANLQSLFFTIGG--QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYS 318 (340)
T ss_dssp H---------HTCCCEEEEETT--EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEE
T ss_pred c---------ccCCcEEEEECC--EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEE
Confidence 3 368999999987 899999999998643 123565 56553221 13469999999999999
Q ss_pred EEeCCCCEEEEeec
Q 044303 398 QFDLAKSRLGFSSS 411 (428)
Q Consensus 398 vFD~e~~rIGfa~~ 411 (428)
|||++++|||||+.
T Consensus 319 vfD~~~~~igfA~~ 332 (340)
T 1wkr_A 319 VYDTTNKRLGLATT 332 (340)
T ss_dssp EEETTTTEEEEEEC
T ss_pred EEeCCCCeEEEEec
Confidence 99999999999983
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-49 Score=395.94 Aligned_cols=322 Identities=18% Similarity=0.207 Sum_probs=235.5
Q ss_pred EEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCCC
Q 044303 35 PVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNNN 114 (428)
Q Consensus 35 Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~~ 114 (428)
||... .+..|+++|.||||+|++.|+|||||+++||+|.+|. .|. ..+++. .++++...
T Consensus 6 ~l~~~-~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~-------------~~~--~~f~~~-----~SsT~~~~ 64 (383)
T 2ewy_A 6 NLQGD-SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS-------------YID--TYFDTE-----RSSTYRSK 64 (383)
T ss_dssp CEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT-------------TBS--CCCCGG-----GCTTCEEE
T ss_pred eccCC-CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC-------------ccc--cCcccc-----cCccceeC
Confidence 45543 4568999999999999999999999999999998662 121 122222 12223445
Q ss_pred CCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc-------
Q 044303 115 TCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS------- 186 (428)
Q Consensus 115 ~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S------- 186 (428)
.|.|.+.|+ +++ ++|.+++|+|+|++.. ...+ .+.|+|......... ....+||||||++.++
T Consensus 65 ~~~~~i~Yg-~Gs-~~G~~~~Dtv~i~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~ 135 (383)
T 2ewy_A 65 GFDVTVKYT-QGS-WTGFVGEDLVTIPKGF------NTSF-LVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLE 135 (383)
T ss_dssp EEEEEEECS-SCE-EEEEEEEEEEEETTTE------EEEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSC
T ss_pred CceEEEEEC-CcE-EEEEEEEEEEEECCCc------ccee-EEEEEEEEeecceeeccCcCceEEecCchhccccccccc
Confidence 789999995 654 7999999999997531 0121 356888765421111 1357999999987654
Q ss_pred -hHHhhhhhhccCCCcEEEecCC---------C--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceE
Q 044303 187 -LPSQLSAAAFKLDRKFSICLSS---------N--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYF 253 (428)
Q Consensus 187 -~~~ql~~~~~~~~~~FS~~L~~---------~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~ 253 (428)
+..+|.+ ++.++++||+||.+ . |.|+|||+|. .++ |++.|+|+.. ..+|.
T Consensus 136 ~~~~~l~~-q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~ 198 (383)
T 2ewy_A 136 TFFDSLVT-QANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEP--SLYKGDIWYTPIKE--------------EWYYQ 198 (383)
T ss_dssp CHHHHHHH-HHTCCSCEEEEECCC---------CCEEEEETSCCG--GGCCSCEEEEECSS--------------BTTBB
T ss_pred CHHHHHHH-ccCCCcceEEEeeccccccccCCCCCeEEEeCccch--hhccCccEEEecCC--------------CceEE
Confidence 4557877 66667899999852 1 9999999983 234 8999999975 36899
Q ss_pred EEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCC---CCCCccceecCC
Q 044303 254 IGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKP---MAPFGACFNSSF 330 (428)
Q Consensus 254 v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C~~~~~ 330 (428)
|.+++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++.+... .++... ......|+....
T Consensus 199 v~l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~ 272 (383)
T 2ewy_A 199 IEILKLEIGGQSLNLDCREYN-----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL-IPEFSDGFWTGSQLACWTNSE 272 (383)
T ss_dssp CCEEEEEETTEECCCCTTTTT-----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC-SSCCCHHHHHTSEEEEECSSS
T ss_pred EEEEEEEECCEEccccccccC-----CccEEEEcCCccccCCHHHHHHHHHHHhhhcc-cccCccccccccccccccCCc
Confidence 999999999998876543221 35799999999999999999999999987653 111111 012457987542
Q ss_pred CCCCCcCCCCCeEEEEEcCC----ceEEEEeccccEEEeC---CCeEEEEE-EeCCCCCCCceeechhhhcceEEEEeCC
Q 044303 331 IGSTHVGAAAPEIHLYMPGT----NRMWKIFGAHSMVRVG---KHAMCLAF-VDGGVNPTTSIVIGAYQLEDNLLQFDLA 402 (428)
Q Consensus 331 ~~~~~~~~~~P~i~~~f~g~----~~~~~i~~~~y~~~~~---~~~~C~~~-~~~~~~~~~~~ILG~~flr~~yvvFD~e 402 (428)
. ....+|+|+|+|+++ +++++|++++|+++.. .+..|+++ +... .+.||||+.|||++|+|||++
T Consensus 273 ~----~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~ 345 (383)
T 2ewy_A 273 T----PWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFDRA 345 (383)
T ss_dssp C----GGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEETT
T ss_pred c----cHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEECC
Confidence 1 124689999999983 2589999999999864 25689863 2211 247999999999999999999
Q ss_pred CCEEEEeecCccccCCcccc
Q 044303 403 KSRLGFSSSLLARQTTCSNL 422 (428)
Q Consensus 403 ~~rIGfa~~~~~~~~~C~~~ 422 (428)
++|||||+ ++|...
T Consensus 346 ~~rIGfA~------~~c~~~ 359 (383)
T 2ewy_A 346 QKRVGFAA------SPCAEI 359 (383)
T ss_dssp TTEEEEEE------CTTCBS
T ss_pred CCeEEEEe------ccCCCc
Confidence 99999998 688654
No 30
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.3e-50 Score=392.90 Aligned_cols=295 Identities=15% Similarity=0.150 Sum_probs=227.2
Q ss_pred CCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCCCCCccee
Q 044303 41 STLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNNNTCTHFP 120 (428)
Q Consensus 41 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~~~c~~~~ 120 (428)
.+.+|+++|.|| +|++.|+|||||+++||+|.+| .+..|..+..+++... + ...+.|.|.+
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C-----------~~~~c~~~~~y~~~~S-----s-~~~~~~~~~i 73 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTEL-----------PASQQSGHSVYNPSAT-----G-KELSGYTWSI 73 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTS-----------CHHHHTTSCCBCHHHH-----C-EEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCC-----------CchhccCCCCCCcccC-----C-cccCCCeEEE
Confidence 567999999999 8999999999999999999866 2224555555554311 1 1235789999
Q ss_pred cCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCcC-CCcceEEecCCCCCc---------hHHh
Q 044303 121 GNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGLA-SGFQGMAGLGRNKVS---------LPSQ 190 (428)
Q Consensus 121 ~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~-~~~~GIlGLg~~~~S---------~~~q 190 (428)
.|+ +|+.+.|.+++|+|+|++. +++++.|||++........ ...+||||||++..+ +..+
T Consensus 74 ~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 143 (323)
T 1bxo_A 74 SYG-DGSSASGNVFTDSVTVGGV---------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDT 143 (323)
T ss_dssp ECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred EeC-CCCeEEEEEEEEEEEECCE---------EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHH
Confidence 996 8888999999999999875 7889999999876322111 357999999987543 5567
Q ss_pred hhhhhccCCCcEEEecCCC--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEEEcCeEee
Q 044303 191 LSAAAFKLDRKFSICLSSN--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSILISGNVVP 267 (428)
Q Consensus 191 l~~~~~~~~~~FS~~L~~~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v~~~~l~ 267 (428)
|.+ + +.+++||+||.++ |.|+|||+|. .++ |++.|+|+... ..+|.|.+++|+|++ ...
T Consensus 144 l~~-~-i~~~~FS~~L~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~~-------------~~~w~v~l~~i~v~~-~~~ 205 (323)
T 1bxo_A 144 VKS-S-LAQPLFAVALKHQQPGVYDFGFIDS--SKYTGSLTYTGVDNS-------------QGFWSFNVDSYTAGS-QSG 205 (323)
T ss_dssp HGG-G-BSSSEEEEECCSSSCEEEEESSCCG--GGBSSCCEEEECBCT-------------TSSCEEEEEEEEETT-EEE
T ss_pred HHH-h-cCCcEEEEEEeCCCCceEEEeCcCh--hhccCceEEEECCCC-------------CCeEEEEEeeEEECC-ccC
Confidence 776 5 4468999999986 9999999983 234 89999999753 468999999999999 211
Q ss_pred ccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCCCCCeEEEEE
Q 044303 268 LNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGAAAPEIHLYM 347 (428)
Q Consensus 268 ~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f 347 (428)
....+||||||++++||++++++|.+++..... ..... ....+|+ ..+|+|+|+|
T Consensus 206 -----------~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~--~~~~g-~~~~~C~-----------~~~P~i~f~f 260 (323)
T 1bxo_A 206 -----------DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ--DSNAG-GYVFDCS-----------TNLPDFSVSI 260 (323)
T ss_dssp -----------EEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE--ETTTT-EEEECTT-----------CCCCCEEEEE
T ss_pred -----------CCceEEEeCCCCceeCCHHHHHHHHHhCCCceE--cCcCC-EEEEECC-----------CCCceEEEEE
Confidence 134699999999999999999999888743211 11111 1123576 2579999999
Q ss_pred cCCceEEEEeccccEEEeCC-CeEEEE-EEeCCCCCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 348 PGTNRMWKIFGAHSMVRVGK-HAMCLA-FVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 348 ~g~~~~~~i~~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
+| ++++||+++|++...+ +..|++ +..... .+.||||+.|||++|+|||++++|||||+.
T Consensus 261 gg--~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 261 SG--YTATVPGSLINYGPSGDGSTCLGGIQSNSG--IGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp TT--EEEEECHHHHEEEECSSSSCEEESEEECTT--CSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CC--EEEEECHHHeEEeccCCCCeEEEEEECCCC--CCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 76 9999999999987643 378997 554432 357999999999999999999999999984
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.4e-49 Score=397.83 Aligned_cols=315 Identities=20% Similarity=0.237 Sum_probs=233.9
Q ss_pred CCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCCCCCccee
Q 044303 41 STLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNNNTCTHFP 120 (428)
Q Consensus 41 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~~~c~~~~ 120 (428)
.+..|+++|.||||+|++.|+|||||+++||+|.+|.. | +..+++. .++++....|.|.+
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~-------------~--~~~y~~~-----~SsT~~~~~~~~~i 78 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF-------------L--HRYYQRQ-----LSSTYRDLRKGVYV 78 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT-------------C--SCCCCGG-----GCTTCEEEEEEEEE
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcc-------------c--cCCcCcc-----cCCCceeCCceEEE
Confidence 35689999999999999999999999999999987621 1 1223322 12233445789999
Q ss_pred cCCCCCceeeeEEEEEEEEeec-CCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCCc--------hHHh
Q 044303 121 GNTVSHVSTFGELATDVVSIQS-TDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS--------LPSQ 190 (428)
Q Consensus 121 ~Y~~~~~~~~G~~~~D~v~~~~-~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S--------~~~q 190 (428)
.|+ +++ ++|.+++|+|+|++ .. +.+ .+.|++......... ....+||||||++.++ ++.+
T Consensus 79 ~Yg-~Gs-~~G~~~~Dtv~ig~g~~-------~~~-~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~ 148 (395)
T 2qp8_A 79 PYT-QGK-WEGELGTDLVSIPHGPN-------VTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDS 148 (395)
T ss_dssp ECS-SCE-EEEEEEEEEEECTTSCS-------CEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred EEC-CcE-EEEEEEeEEEEECCCCC-------ceE-EEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHH
Confidence 995 654 59999999999973 31 122 256777665421111 2357999999987653 5568
Q ss_pred hhhhhccCCCcEEEecCC-------------C-CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEE
Q 044303 191 LSAAAFKLDRKFSICLSS-------------N-GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIG 255 (428)
Q Consensus 191 l~~~~~~~~~~FS~~L~~-------------~-G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~ 255 (428)
|.+ ++.++++||+||.+ . |.|+|||+|. .++ |++.|+|+.. ..+|.|.
T Consensus 149 l~~-q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v~ 211 (395)
T 2qp8_A 149 LVK-QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH--SLYTGSLWYTPIRR--------------EWYYEVI 211 (395)
T ss_dssp HHH-HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCG--GGEEEEEEEEECCS--------------BTTBBCC
T ss_pred HHH-ccCCcceEEEEeccccccccccccccCCCcEEEECCcCc--ccccCceEEeccCC--------------CceEEEE
Confidence 888 77777899999963 2 9999999983 234 8999999974 3689999
Q ss_pred EeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCC---CCCCccceecCCCC
Q 044303 256 VKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKP---MAPFGACFNSSFIG 332 (428)
Q Consensus 256 l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C~~~~~~~ 332 (428)
|++|+|+++.+.++...+. ...+||||||++++||+++|++|.+++.+... ..+... .....+|+.....
T Consensus 212 l~~i~v~g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~~- 284 (395)
T 2qp8_A 212 IVRVEINGQDLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGTT- 284 (395)
T ss_dssp EEEEEETTEECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHTTCSCEEESTTCC-
T ss_pred EEEEEECCEEcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc-cccCCccccccccccccccccc-
Confidence 9999999998876543321 35799999999999999999999999988753 111111 1123579876421
Q ss_pred CCCcCCCCCeEEEEEcCCc----eEEEEeccccEEEeCC----CeEEEE--EEeCCCCCCCceeechhhhcceEEEEeCC
Q 044303 333 STHVGAAAPEIHLYMPGTN----RMWKIFGAHSMVRVGK----HAMCLA--FVDGGVNPTTSIVIGAYQLEDNLLQFDLA 402 (428)
Q Consensus 333 ~~~~~~~~P~i~~~f~g~~----~~~~i~~~~y~~~~~~----~~~C~~--~~~~~~~~~~~~ILG~~flr~~yvvFD~e 402 (428)
.+..+|+|+|+|+|+. ++|+|+|++|+++..+ ...|++ +... .+.||||+.|||++|+|||++
T Consensus 285 ---~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~ 357 (395)
T 2qp8_A 285 ---PWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGAVIMEGFYVVFDRA 357 (395)
T ss_dssp ---CGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECHHHHTTEEEEEETT
T ss_pred ---hHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEEChHHhCCeeEEEECC
Confidence 1246999999999831 3799999999998653 358974 3332 247999999999999999999
Q ss_pred CCEEEEeecCccccCCcccc
Q 044303 403 KSRLGFSSSLLARQTTCSNL 422 (428)
Q Consensus 403 ~~rIGfa~~~~~~~~~C~~~ 422 (428)
++|||||+ ++|.+.
T Consensus 358 ~~rIGfA~------~~c~~~ 371 (395)
T 2qp8_A 358 RKRIGFAV------SACHVH 371 (395)
T ss_dssp TTEEEEEE------ETTCCC
T ss_pred CCEEEEEe------ccCCCC
Confidence 99999998 688764
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=5.6e-49 Score=394.46 Aligned_cols=318 Identities=19% Similarity=0.230 Sum_probs=236.6
Q ss_pred CceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCCCCCcceec
Q 044303 42 TLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNNNTCTHFPG 121 (428)
Q Consensus 42 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~~~c~~~~~ 121 (428)
...|+++|.||||+|+++|+|||||+++||+|.+| |..+..+++. .++++....|.|.+.
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c---------------~~~~~~y~~~-----~SsT~~~~~~~~~i~ 86 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---------------PFLHRYYQRQ-----LSSTYRDLRKGVYVP 86 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---------------TTCSCCCCGG-----GCTTCEEEEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC---------------CcccCCcCcc-----cCcccccCCCEEEEE
Confidence 46899999999999999999999999999999765 2222333332 122334567899999
Q ss_pred CCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCC--------chHHhhh
Q 044303 122 NTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKV--------SLPSQLS 192 (428)
Q Consensus 122 Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~--------S~~~ql~ 192 (428)
|+ +++ +.|.+++|+|+|++.. .+.. .+.|+|......... ....+||||||++.. +++.+|.
T Consensus 87 Yg-~Gs-~~G~~~~D~v~ig~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 157 (402)
T 3vf3_A 87 YT-QGK-WEGELGTDLVSIPHGP------NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 157 (402)
T ss_dssp CS-SCE-EEEEEEEEEEECTTSC------SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred EC-cEE-EEEEEEEEEEEECCcc------ccce-eeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHH
Confidence 95 554 7999999999998521 0121 245777665421111 245799999998754 4667888
Q ss_pred hhhccCCCcEEEecCC------------C--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEe
Q 044303 193 AAAFKLDRKFSICLSS------------N--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVK 257 (428)
Q Consensus 193 ~~~~~~~~~FS~~L~~------------~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~ 257 (428)
+ ++.++++||+||.+ . |.|+|||+|. .++ |++.|+|+.. ..+|.|.++
T Consensus 158 ~-q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~w~v~l~ 220 (402)
T 3vf3_A 158 K-QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH--SLYTGSLWYTPIRR--------------EWYYEVIIV 220 (402)
T ss_dssp H-HSCCCSCEEEEECCCC-------------EEEEESSCCG--GGEEEEEEEEECSS--------------BTTBEECEE
T ss_pred H-ccCCccceEEEeecccccccccccccCCCCEEEeCCcCc--ccccCceEEEeCCc--------------CcEEEEEEe
Confidence 8 87777899999952 2 9999999983 244 8999999975 368999999
Q ss_pred EEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCC---CCCCccceecCCCCCC
Q 044303 258 SILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKP---MAPFGACFNSSFIGST 334 (428)
Q Consensus 258 ~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C~~~~~~~~~ 334 (428)
+|+|+++.+.++...+ +...+||||||++++||+++|++|.+++.+... ..+... .....+|+......
T Consensus 221 ~i~v~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~~~-- 292 (402)
T 3vf3_A 221 RVEINGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGTTP-- 292 (402)
T ss_dssp EEEETTEECCCCGGGG-----GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-TSCCCTTGGGTCSCEEEETTCCC--
T ss_pred EEEECCEEeccccccc-----CCCeEEEECCCCcccCCHHHHHHHHHHHhhhcc-ccccCccccccccccccccccch--
Confidence 9999999987654332 135799999999999999999999999998853 111111 12246899765321
Q ss_pred CcCCCCCeEEEEEcCC----ceEEEEeccccEEEeCCC----eEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEE
Q 044303 335 HVGAAAPEIHLYMPGT----NRMWKIFGAHSMVRVGKH----AMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRL 406 (428)
Q Consensus 335 ~~~~~~P~i~~~f~g~----~~~~~i~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rI 406 (428)
+..+|+|+|+|++. .++++|+|++|+++..+. ..|+++..... .+.||||+.|||++|+|||++++||
T Consensus 293 --~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~--~~~~ILG~~fl~~~yvvfD~~~~rI 368 (402)
T 3vf3_A 293 --WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARKRI 368 (402)
T ss_dssp --GGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE--SSCEEECHHHHTTEEEEEEGGGTEE
T ss_pred --HhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCCCEE
Confidence 24799999999983 136999999999987542 48986322111 2579999999999999999999999
Q ss_pred EEeecCccccCCccccc
Q 044303 407 GFSSSLLARQTTCSNLT 423 (428)
Q Consensus 407 Gfa~~~~~~~~~C~~~~ 423 (428)
|||+ ++|...+
T Consensus 369 GfA~------~~c~~~~ 379 (402)
T 3vf3_A 369 GFAV------SACHVHD 379 (402)
T ss_dssp EEEE------ETTCCBC
T ss_pred EEEe------cccCccc
Confidence 9998 7888643
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.3e-48 Score=397.56 Aligned_cols=318 Identities=19% Similarity=0.230 Sum_probs=238.8
Q ss_pred CceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCCCCCCcceec
Q 044303 42 TLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCNNNTCTHFPG 121 (428)
Q Consensus 42 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~~~~c~~~~~ 121 (428)
+..|+++|.||||+|+++|+|||||+++||+|.+| |..+..+++. .++++....|.|.+.
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c---------------c~~~~~y~~~-----~SsT~~~~~~~~~i~ 132 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---------------PFLHRYYQRQ-----LSSTYRDLRKGVYVP 132 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---------------TTCSCCCCGG-----GCTTCEEEEEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc---------------cccCCcccCC-----CCCCcccCCccEEEE
Confidence 45899999999999999999999999999999765 2223333332 122334567899999
Q ss_pred CCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEeccccccccCc-CCCcceEEecCCCCC--------chHHhhh
Q 044303 122 NTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKV--------SLPSQLS 192 (428)
Q Consensus 122 Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~--------S~~~ql~ 192 (428)
|+ +++ +.|.+++|+|+|++.. .+++ .+.|+|+........ ....+||||||++.+ +++.+|.
T Consensus 133 Yg-~Gs-~~G~~~~Dtv~ig~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 203 (455)
T 3lpj_A 133 YT-QGK-WEGELGTDLVSIPHGP------NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 203 (455)
T ss_dssp CS-SCE-EEEEEEEEEEECTTSC------SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred eC-CeE-EEEEEEEEEEEECCCc------ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHH
Confidence 95 554 6999999999998521 1132 357888776532111 146799999998754 4667888
Q ss_pred hhhccCCCcEEEecCC------------C--CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEe
Q 044303 193 AAAFKLDRKFSICLSS------------N--GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVK 257 (428)
Q Consensus 193 ~~~~~~~~~FS~~L~~------------~--G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~ 257 (428)
+ ++.++++||+||.+ . |.|+|||+|. .++ |++.|+|+.. ..+|.|.++
T Consensus 204 ~-q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~w~v~l~ 266 (455)
T 3lpj_A 204 K-QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH--SLYTGSLWYTPIRR--------------EWYYEVIIV 266 (455)
T ss_dssp H-HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCG--GGEEEEEEEEECCS--------------BTTBBCCEE
T ss_pred H-ccCCCceeEEEeccccccccccccccCCCceEEECCcCc--ccccCceEEEecCC--------------CceeEEEEe
Confidence 8 77777899999963 2 9999999983 244 8999999975 368999999
Q ss_pred EEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHHhccCCCCCCC---CCCCccceecCCCCCC
Q 044303 258 SILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIKSYSNIPRVKP---MAPFGACFNSSFIGST 334 (428)
Q Consensus 258 ~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C~~~~~~~~~ 334 (428)
+|.|+++.+.++...+ +...+||||||++++||+++|++|.+++.+... ..+... .....+|+......
T Consensus 267 ~i~v~g~~~~~~~~~~-----~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~g~~~~C~~~~~~~-- 338 (455)
T 3lpj_A 267 RVEINGQDLKMDCKEY-----NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGTTP-- 338 (455)
T ss_dssp EEEETTEECCCCGGGG-----GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHTTCSCEEESTTCCC--
T ss_pred EEEECCEEcccccccc-----CCCeEEEECCCcceeCCHHHHHHHHHHhhhhcc-ccccCcccccCcceecccccCCc--
Confidence 9999999987654332 136799999999999999999999999998753 111111 12246898765321
Q ss_pred CcCCCCCeEEEEEcCC----ceEEEEeccccEEEeCCC----eEEEEEEeCCCCCCCceeechhhhcceEEEEeCCCCEE
Q 044303 335 HVGAAAPEIHLYMPGT----NRMWKIFGAHSMVRVGKH----AMCLAFVDGGVNPTTSIVIGAYQLEDNLLQFDLAKSRL 406 (428)
Q Consensus 335 ~~~~~~P~i~~~f~g~----~~~~~i~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~yvvFD~e~~rI 406 (428)
+..+|+|+|+|++. .++|+|+|++|+++..+. ..|+++..... .+.||||+.|||++|+|||++++||
T Consensus 339 --~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~--~~~~ILG~~fl~~~yvvfD~~~~rI 414 (455)
T 3lpj_A 339 --WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARKRI 414 (455)
T ss_dssp --GGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE--SSCEEECHHHHTTEEEEEETTTTEE
T ss_pred --hhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCCCEE
Confidence 24699999999983 136999999999987642 58997432211 3579999999999999999999999
Q ss_pred EEeecCccccCCccccc
Q 044303 407 GFSSSLLARQTTCSNLT 423 (428)
Q Consensus 407 Gfa~~~~~~~~~C~~~~ 423 (428)
|||+ ++|....
T Consensus 415 GfA~------~~c~~~~ 425 (455)
T 3lpj_A 415 GFAV------SACHVHD 425 (455)
T ss_dssp EEEE------ETTCCCC
T ss_pred EEEe------ccccccc
Confidence 9998 6887765
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=8.1e-39 Score=298.03 Aligned_cols=224 Identities=19% Similarity=0.185 Sum_probs=176.7
Q ss_pred EEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCCC
Q 044303 33 VVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGCN 112 (428)
Q Consensus 33 ~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~~ 112 (428)
.+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|..|.. +..|..+..+++. .++++.
T Consensus 4 ~~~l~n~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~----------~~~C~~~~~y~~~-----~SsT~~ 67 (239)
T 1b5f_A 4 VVALTND-RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCIN----------SKACRAHSMYESS-----DSSTYK 67 (239)
T ss_dssp EEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS----------CHHHHTSCCBCGG-----GCTTCE
T ss_pred eeeeeec-CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCC----------CcccCCCCCCCCc-----cCCCee
Confidence 5788873 57899999999999999999999999999999987631 2356555555543 123334
Q ss_pred CCCCcceecCCCCCceeeeEEEEEEEEeecCCCCCCCcceecCceEEecccccccc-CcCCCcceEEecCCCCCc--hHH
Q 044303 113 NNTCTHFPGNTVSHVSTFGELATDVVSIQSTDGSKPGQVVPVPNIIFACGATFLLE-GLASGFQGMAGLGRNKVS--LPS 189 (428)
Q Consensus 113 ~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~~fG~~~~~~~~-~~~~~~~GIlGLg~~~~S--~~~ 189 (428)
...|.|.+.|+ +++ ++|.+++|+|++++. +++++.|||+...... ......+||||||++.++ +..
T Consensus 68 ~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~ 136 (239)
T 1b5f_A 68 ENGTFGAIIYG-TGS-ITGFFSQDSVTIGDL---------VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWY 136 (239)
T ss_dssp EEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHH
T ss_pred eCCcEEEEEEC-CCc-EEEEEEEEEEEECCc---------EEccEEEEEEEeccCccccccCcceEEecCccccccHHHH
Confidence 56788999995 654 899999999999875 7889999999875321 123467999999999876 445
Q ss_pred hhhhhhccC-CCcEEEecCCC------CceEecCCCCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEEE
Q 044303 190 QLSAAAFKL-DRKFSICLSSN------GAVFFGDVSFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSILI 261 (428)
Q Consensus 190 ql~~~~~~~-~~~FS~~L~~~------G~l~fGg~d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v 261 (428)
+|.+ ++.+ +++||+||.+. |.|+|||+|. .++ |++.|+|+.. ..+|.|.|++|+|
T Consensus 137 ~l~~-qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~--~~~~g~l~~~p~~~--------------~~~~~v~l~~i~v 199 (239)
T 1b5f_A 137 NMLN-QGLVKERRFSFWLNRNVDEEEGGELVFGGLDP--NHFRGDHTYVPVTY--------------QYYWQFGIGDVLI 199 (239)
T ss_dssp HHHH-TTCCSSSEEEEEECCSCSSSCCEEEEETSCCG--GGEEEEEEEEEEEE--------------ETTEEEEECCEEE
T ss_pred HHHH-CCCCCCCEEEEEEeCCCCCCCCeEEEECCcCh--hhccCceEEEEccc--------------CCeEEEEeeEEEE
Confidence 6776 6655 68999999862 9999999983 244 8999999975 3589999999999
Q ss_pred cCeEeeccccccccccCCCCCeEEeccccceecCHHHHHHHHHHHHH
Q 044303 262 SGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIYKAFVKTFIK 308 (428)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~l~~ 308 (428)
+++.+.+.. ....+||||||++++||+++|++|.+++++
T Consensus 200 ~~~~~~~~~--------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 200 GDKSTGFCA--------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TTEECCTTT--------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCEEecccC--------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 999876432 135799999999999999999999998753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.5e-35 Score=276.51 Aligned_cols=218 Identities=18% Similarity=0.245 Sum_probs=171.2
Q ss_pred eecCceEEeccccccccCc-CCCcceEEecCCCCCc------hHHhhhhhhccC-CCcEEEecCCC------CceEecCC
Q 044303 152 VPVPNIIFACGATFLLEGL-ASGFQGMAGLGRNKVS------LPSQLSAAAFKL-DRKFSICLSSN------GAVFFGDV 217 (428)
Q Consensus 152 ~~~~~~~fG~~~~~~~~~~-~~~~~GIlGLg~~~~S------~~~ql~~~~~~~-~~~FS~~L~~~------G~l~fGg~ 217 (428)
+++++++|||++.+....+ ....+||||||++..+ +..+|.+ ++.+ +++||+||.+. |.|+|||+
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~-qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQ-QKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHH-TTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHH-CCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 4788999999998633222 2468999999997654 5678887 7666 68999999874 99999999
Q ss_pred CCCCCCC-CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCH
Q 044303 218 SFPGIDP-KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLET 296 (428)
Q Consensus 218 d~~~~~~-g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~ 296 (428)
|. .++ |++.|+|+.. ..+|.|.+++|+|+++.+... ....+||||||+++++|+
T Consensus 82 d~--~~~~g~l~~~p~~~--------------~~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTt~~~lP~ 136 (241)
T 1lya_B 82 DS--KYYKGSLSYLNVTR--------------KAYWQVHLDQVEVASGLTLCK---------EGCEAIVDTGTSLMVGPV 136 (241)
T ss_dssp CG--GGEEEEEEEEECSS--------------BTTBEEEEEEEEETTSCEEST---------TCEEEEECTTCSSEEECH
T ss_pred CH--HHcCCceEEEECcc--------------ccEEEEEEeEEEECCeeEecc---------CCCEEEEECCCccccCCH
Confidence 83 244 8999999974 468999999999999764311 235799999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCccceecCCCCCCCcCCCCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEEE-
Q 044303 297 SIYKAFVKTFIKSYSNIPRVKPMAPFGACFNSSFIGSTHVGAAAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCLA- 373 (428)
Q Consensus 297 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~~- 373 (428)
++|++|.+++.+... .......+|+.. ..+|+|+|+|+| ++++|++++|+++..+ +..|+.
T Consensus 137 ~~~~~l~~~~~~~~~-----~~g~~~~~C~~~---------~~~p~i~f~f~g--~~~~l~~~~y~~~~~~~~~~~C~~~ 200 (241)
T 1lya_B 137 DEVRELQKAIGAVPL-----IQGEYMIPCEKV---------STLPAITLKLGG--KGYKLSPEDYTLKVSQAGKTLCLSG 200 (241)
T ss_dssp HHHHHHHHHHTCEEE-----ETTEEEEEGGGG---------GGSCCEEEEETT--EEEEECTTTSEEEETTTTSSEEEES
T ss_pred HHHHHHHHHhCCeec-----cCCcEEEECCCC---------ccCCeEEEEECC--EEEEECHHHhEEEccCCCCCeeEEE
Confidence 999999999864421 111223468754 368999999976 9999999999998753 468995
Q ss_pred EEeCCC--CCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 374 FVDGGV--NPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 374 ~~~~~~--~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
+..... ...+.||||+.|||++|+|||++++|||||++
T Consensus 201 ~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~ 240 (241)
T 1lya_B 201 FMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEA 240 (241)
T ss_dssp EEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEecccCCCCCCeEEechHHhcceEEEEECCCCEEEEEEc
Confidence 665432 12468999999999999999999999999984
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.77 E-value=6.8e-19 Score=139.31 Aligned_cols=94 Identities=21% Similarity=0.182 Sum_probs=72.4
Q ss_pred eEEEEeeCCCCceEEEEEEecCCCceEEEEEecCCCceeecCCCCCCCCCcccccCCCcccCCCCCCCccCCCCCCCCCC
Q 044303 32 LVVPVTKDSSTLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNCEQGFVSSSYKPARCGSAQCKIAGSESCVESCLPKGPGC 111 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~~~c~~S~t~~~~~c~s~~C~~~~~~~c~~~~~~~~~~~ 111 (428)
..+||.+. .+.+|+++|.||||+|++.|+|||||+++||+|..|... +..|..+..++.. .++++
T Consensus 3 ~~~~l~n~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~---------~~~C~~~~~y~p~-----~SsT~ 67 (97)
T 1lya_A 3 IPEVLKNY-MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLL---------DIACWIHHKYNSD-----KSSTY 67 (97)
T ss_dssp EEEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTT---------CHHHHTSCCBCGG-----GCTTC
T ss_pred ceEeeEEC-CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCc---------ccccCCCCCCCch-----hCCCc
Confidence 46888863 578999999999999999999999999999999876210 1356555555433 22333
Q ss_pred CCCCCcceecCCCCCceeeeEEEEEEEEeec
Q 044303 112 NNNTCTHFPGNTVSHVSTFGELATDVVSIQS 142 (428)
Q Consensus 112 ~~~~c~~~~~Y~~~~~~~~G~~~~D~v~~~~ 142 (428)
....|.|.+.|+ +++ +.|.+++|+|+|++
T Consensus 68 ~~~~~~~~i~Yg-~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 68 VKNGTSFDIHYG-SGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEECS-SCE-EEEEEEEEEEEESC
T ss_pred eeCCCcEEEEEC-CcE-EEEEEEEEEEEECC
Confidence 456799999996 665 89999999999976
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.62 E-value=7.3e-16 Score=119.61 Aligned_cols=71 Identities=17% Similarity=0.379 Sum_probs=59.4
Q ss_pred CCCeEEEEEcCCceEEEEeccccEEEeCC--CeEEEE-EEeCCC-CCCCceeechhhhcceEEEEeCCCCEEEEeec
Q 044303 339 AAPEIHLYMPGTNRMWKIFGAHSMVRVGK--HAMCLA-FVDGGV-NPTTSIVIGAYQLEDNLLQFDLAKSRLGFSSS 411 (428)
Q Consensus 339 ~~P~i~~~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~-~~~~~~ILG~~flr~~yvvFD~e~~rIGfa~~ 411 (428)
.+|+|+|+|+| .+++|+|++|++.... +..|++ +...+. ...+.||||++|||++|+|||++++|||||+.
T Consensus 12 ~~P~i~f~~gg--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 12 SMPNVSFTIGG--KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp GCCCEEEEETT--EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEECC--EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEc
Confidence 68999999987 9999999999998653 368994 555421 12468999999999999999999999999984
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.08 E-value=0.45 Score=39.39 Aligned_cols=26 Identities=27% Similarity=0.396 Sum_probs=24.2
Q ss_pred eeechhhhcceEEEEeCCCCEEEEee
Q 044303 385 IVIGAYQLEDNLLQFDLAKSRLGFSS 410 (428)
Q Consensus 385 ~ILG~~flr~~yvvFD~e~~rIGfa~ 410 (428)
.|||..||+++-++.|+.+++|-|..
T Consensus 110 ~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 110 VLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEEETT
T ss_pred eEecHHHHhhCCEEEECCCCEEEEcc
Confidence 69999999999999999999999863
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.65 E-value=0.32 Score=40.50 Aligned_cols=27 Identities=22% Similarity=0.330 Sum_probs=24.7
Q ss_pred ceeechhhhcceEEEEeCCCCEEEEee
Q 044303 384 SIVIGAYQLEDNLLQFDLAKSRLGFSS 410 (428)
Q Consensus 384 ~~ILG~~flr~~yvvFD~e~~rIGfa~ 410 (428)
-.|||..||+++-.+.|++++++-|..
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 369999999999999999999999864
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=79.30 E-value=1.6 Score=35.87 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=26.5
Q ss_pred CCceEEEEEEecCCCceEEEEEecCCCceeec
Q 044303 41 STLQYLTQIQQRTPLVPVKLTLDLGGGFLWVN 72 (428)
Q Consensus 41 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~ 72 (428)
..+.+++++.|+. +++.+++|||++.+.++
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccC
Confidence 4578999999987 89999999999988875
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=78.34 E-value=1.9 Score=33.39 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=23.2
Q ss_pred EEEEEEecCCCceEEEEEecCCCceeec
Q 044303 45 YLTQIQQRTPLVPVKLTLDLGGGFLWVN 72 (428)
Q Consensus 45 Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~ 72 (428)
-++.|.||. |.+.+++|||++++-+.
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEc
Confidence 467899997 99999999999999886
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.97 E-value=2.2 Score=32.77 Aligned_cols=27 Identities=19% Similarity=0.047 Sum_probs=23.7
Q ss_pred EEEEEEecCCCceEEEEEecCCCceeecC
Q 044303 45 YLTQIQQRTPLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 45 Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~ 73 (428)
-++.|.||. |.+.+++|||.+++-+.-
T Consensus 9 P~vtvkI~G--q~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 9 PLVTIKIGG--QLKEALLDTGADDTIIEE 35 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSEEESC
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEec
Confidence 367899998 999999999999999864
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=72.61 E-value=3 Score=34.47 Aligned_cols=30 Identities=13% Similarity=0.166 Sum_probs=26.2
Q ss_pred CCceEEEEEEecCCCceEEEEEecCCCceeec
Q 044303 41 STLQYLTQIQQRTPLVPVKLTLDLGGGFLWVN 72 (428)
Q Consensus 41 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~ 72 (428)
....|++++.|.. +++.+++|||++.+.+.
T Consensus 21 ~~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is 50 (148)
T 3s8i_A 21 QVTMLYINCKVNG--HPLKAFVDSGAQMTIMS 50 (148)
T ss_dssp -CCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccCEEEEEEEECC--EEEEEEEeCCCCcEeeC
Confidence 3568999999987 99999999999998886
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=71.57 E-value=3.8 Score=31.39 Aligned_cols=27 Identities=22% Similarity=0.151 Sum_probs=23.6
Q ss_pred EEEEEEecCCCceEEEEEecCCCceeecC
Q 044303 45 YLTQIQQRTPLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 45 Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~ 73 (428)
-++.|.||. |.+.+++|||.+++-+.-
T Consensus 9 P~vti~I~G--q~~e~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 9 PVVTAYIEG--QPVEVLLDTGADDSIVAG 35 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEESS
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEcC
Confidence 367899998 999999999999999853
No 45
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=71.23 E-value=3.6 Score=32.27 Aligned_cols=29 Identities=14% Similarity=0.133 Sum_probs=24.2
Q ss_pred EEEEEEec---CCCceEEEEEecCCCceeecC
Q 044303 45 YLTQIQQR---TPLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 45 Y~~~i~iG---tP~Q~~~v~~DTGSs~~wv~~ 73 (428)
-.+.|.|| +|+|.+..++|||.+++-+.-
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPI 42 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEG
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEec
Confidence 35667777 789999999999999999864
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=66.15 E-value=5 Score=31.69 Aligned_cols=25 Identities=28% Similarity=0.384 Sum_probs=22.0
Q ss_pred EEEEEEecCCCceEEEEEecCCCceeec
Q 044303 45 YLTQIQQRTPLVPVKLTLDLGGGFLWVN 72 (428)
Q Consensus 45 Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~ 72 (428)
-++ |.||. |.+.+++|||.+++-+.
T Consensus 15 P~v-ikI~G--q~~eaLLDTGAD~TVi~ 39 (116)
T 2hah_A 15 EIL-IFVNG--YPIKFLLDTGADITVLN 39 (116)
T ss_dssp EEE-EEETT--EEEEEEECTTCSSCEEE
T ss_pred CEE-EEECC--EEEEEEecCCCCcEEEc
Confidence 455 99997 99999999999999886
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=59.81 E-value=8.5 Score=30.19 Aligned_cols=27 Identities=4% Similarity=-0.091 Sum_probs=23.4
Q ss_pred EEEEEEecCCCceEEEEEecCCCceeecC
Q 044303 45 YLTQIQQRTPLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 45 Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~ 73 (428)
-.+.+.||. |.+..++|||.+++-+.-
T Consensus 10 P~vti~I~G--q~~eaLLDTGADdTVi~~ 36 (114)
T 3sqf_A 10 PSLTLWLDD--KMFTGLINTGADVTIIKL 36 (114)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEG
T ss_pred CeEEEEECC--EEEEEEEccCCCceEEec
Confidence 367789998 999999999999999863
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=50.06 E-value=15 Score=29.67 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=25.5
Q ss_pred CceEEEEEEecCCCceEEEEEecCCCceeecC
Q 044303 42 TLQYLTQIQQRTPLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 42 ~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~~ 73 (428)
...-++.+.|+. |...+++|||.+++-+.-
T Consensus 20 ~~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 20 PPEPRITLKVGG--QPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp CCSSEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred cCCCEEEEEECC--EEEEEEEeCCCCeEEEcc
Confidence 345678899998 999999999999999864
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=43.16 E-value=20 Score=31.19 Aligned_cols=26 Identities=19% Similarity=0.077 Sum_probs=23.3
Q ss_pred EEEEEEecCCCceEEEEEecCCCceeec
Q 044303 45 YLTQIQQRTPLVPVKLTLDLGGGFLWVN 72 (428)
Q Consensus 45 Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~ 72 (428)
-.+.|.||. |.+..++|||.+++-+.
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIE 34 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEe
Confidence 467899998 99999999999999885
No 50
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=41.55 E-value=24 Score=26.51 Aligned_cols=14 Identities=7% Similarity=-0.137 Sum_probs=12.9
Q ss_pred eEEeccccceecCH
Q 044303 283 TKISTVFPYTVLET 296 (428)
Q Consensus 283 ~iiDSGTs~~~lp~ 296 (428)
++||||++.+.+|.
T Consensus 30 v~~DTGSs~lWv~~ 43 (97)
T 1lya_A 30 VVFDTGSSNLWVPS 43 (97)
T ss_dssp EEEETTCCCEEEEB
T ss_pred EEEeCCCCceEEeE
Confidence 78999999999985
No 51
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=41.20 E-value=19 Score=28.65 Aligned_cols=22 Identities=32% Similarity=0.398 Sum_probs=18.1
Q ss_pred ecCCCceEEEEEecCCCceeecCC
Q 044303 51 QRTPLVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 51 iGtP~Q~~~v~~DTGSs~~wv~~~ 74 (428)
||. |.+..++|||.+++-+.-.
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEE 48 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETT
T ss_pred CCC--EEEEEEecCCCCcEEEecc
Confidence 555 7789999999999998743
No 52
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=38.81 E-value=33 Score=30.12 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=27.0
Q ss_pred eEEEEeeCCCCceEEE---EEEecCC----CceEEEEEecCCCceeecCC
Q 044303 32 LVVPVTKDSSTLQYLT---QIQQRTP----LVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~---~i~iGtP----~Q~~~v~~DTGSs~~wv~~~ 74 (428)
.-+|+.. ...|.+ .|.||.- .....+++|||++++++|..
T Consensus 91 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 91 SYLNVTR---KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEECSS---BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEECcc---ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 3455543 245555 4678762 35678999999999999853
No 53
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=38.71 E-value=40 Score=31.27 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=31.0
Q ss_pred CCceEEEEeeCCCCceEEEE---EEecC---CCceEEEEEecCCCceeecC
Q 044303 29 PKALVVPVTKDSSTLQYLTQ---IQQRT---PLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 29 ~~~~~~Pl~~~~~~~~Y~~~---i~iGt---P~Q~~~v~~DTGSs~~wv~~ 73 (428)
.+..-+|+.. ....|.++ |.||. +.+...++||||++++++|.
T Consensus 181 g~l~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~ 229 (329)
T 3c9x_A 181 GPVAYTPVDN--SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDD 229 (329)
T ss_dssp SCEEEEECBC--TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECH
T ss_pred cceEEEEccC--CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCH
Confidence 3445678764 23467666 67876 34678999999999999985
No 54
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=38.62 E-value=36 Score=29.99 Aligned_cols=39 Identities=18% Similarity=0.047 Sum_probs=27.8
Q ss_pred eEEEEeeCCCCceEEEE---EEecC-----CCceEEEEEecCCCceeecC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRT-----PLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGt-----P~Q~~~v~~DTGSs~~wv~~ 73 (428)
.-+|+... ..|.++ |.||. +.....++||||++++++|.
T Consensus 180 ~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 180 TYVPVTYQ---YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEEEE---TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred EEEEcccC---CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 45666542 356665 67876 23467899999999999984
No 55
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=38.22 E-value=28 Score=26.68 Aligned_cols=35 Identities=20% Similarity=0.101 Sum_probs=27.0
Q ss_pred cceEEEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCHHHH
Q 044303 250 AEYFIGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETSIY 299 (428)
Q Consensus 250 ~~y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~~~ 299 (428)
..|+=.+..|+|+|+.+. +++|||+--+.+.....
T Consensus 4 ~l~~RP~v~v~I~Gq~~e---------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 4 NLEKRPTTIVLINDTPLN---------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp CSSSCCEEEEEETTEEEE---------------EEECTTCSSCEEEHHHH
T ss_pred eccCCCEEEEEECCEEEE---------------EEeccCCCcEEEccccC
Confidence 345556677999998643 68999999999997554
No 56
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=37.23 E-value=24 Score=26.85 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=24.6
Q ss_pred ceEEEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCH
Q 044303 251 EYFIGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLET 296 (428)
Q Consensus 251 ~y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~ 296 (428)
.|+=++..|+|+|+.+. +++|||+-.+.+..
T Consensus 5 l~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 45556677999998754 68999999998874
No 57
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=35.54 E-value=26 Score=26.67 Aligned_cols=31 Identities=16% Similarity=0.121 Sum_probs=24.8
Q ss_pred cceEEEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecC
Q 044303 250 AEYFIGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLE 295 (428)
Q Consensus 250 ~~y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp 295 (428)
..|+=++..|+|+|+.+. +++|||+--+.+.
T Consensus 4 ~l~~RP~vti~I~Gq~~e---------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 4 SLWKRPVVTAYIEGQPVE---------------VLLDTGADDSIVA 34 (99)
T ss_dssp CSSSCCEEEEEETTEEEE---------------EEECTTCSSCEES
T ss_pred ccccCCeEEEEECCEEEE---------------EEEecCCCceEEc
Confidence 356667778999998764 6899999988874
No 58
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=34.02 E-value=47 Score=30.72 Aligned_cols=43 Identities=7% Similarity=-0.084 Sum_probs=30.6
Q ss_pred CCceEEEEeeCCCCceEEEE---EEecCC---CceEEEEEecCCCceeecC
Q 044303 29 PKALVVPVTKDSSTLQYLTQ---IQQRTP---LVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 29 ~~~~~~Pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~wv~~ 73 (428)
.+..-+|+.. ....|.++ |.||.- .+...+++|||++++++|.
T Consensus 176 g~l~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 224 (325)
T 1ibq_A 176 GSITYTDADS--SQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDD 224 (325)
T ss_dssp SCCEEEECBC--TTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECH
T ss_pred CceEEEEcCC--CCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCH
Confidence 3456678864 23456665 678762 4578999999999999984
No 59
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=33.98 E-value=39 Score=31.29 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=30.2
Q ss_pred CceEEEEeeCCCCceEEEE---EEecC--CCceEEEEEecCCCceeecCC
Q 044303 30 KALVVPVTKDSSTLQYLTQ---IQQRT--PLVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~~---i~iGt--P~Q~~~v~~DTGSs~~wv~~~ 74 (428)
+..-+|+.. ....|.++ |.||. +.....++||||++++++|..
T Consensus 182 ~l~~~p~~~--~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 182 SLTTVPIDN--SRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp CCEEEECBC--TTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred ceEEEEccC--CCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 456778764 23456554 67886 235678999999999999853
No 60
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=33.58 E-value=34 Score=31.75 Aligned_cols=40 Identities=13% Similarity=-0.009 Sum_probs=27.8
Q ss_pred eEEEEeeCCCCceEEEE---EEecC--CCceEEEEEecCCCceeecC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRT--PLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGt--P~Q~~~v~~DTGSs~~wv~~ 73 (428)
.-+|+.. ....|.++ |.||. +.+...+++|||++++++|.
T Consensus 180 ~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~ 224 (323)
T 1izd_A 180 TYTDVDN--SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDD 224 (323)
T ss_dssp EEEECBC--TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECH
T ss_pred EEEECCC--CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCH
Confidence 4566653 23456665 56775 24567899999999999985
No 61
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=31.50 E-value=24 Score=33.67 Aligned_cols=44 Identities=9% Similarity=0.065 Sum_probs=29.1
Q ss_pred CceEEEEeeCCCCceEEEE---EEecC-----CCceE---EEEEecCCCceeecC
Q 044303 30 KALVVPVTKDSSTLQYLTQ---IQQRT-----PLVPV---KLTLDLGGGFLWVNC 73 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~~---i~iGt-----P~Q~~---~v~~DTGSs~~wv~~ 73 (428)
+..-+||........|+++ |.||. |+..+ .+++|||++++.+|.
T Consensus 191 ~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~ 245 (381)
T 1t6e_X 191 SMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRP 245 (381)
T ss_dssp TCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECH
T ss_pred cceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCH
Confidence 4457888764333356554 67875 22223 389999999999984
No 62
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=31.48 E-value=35 Score=27.38 Aligned_cols=27 Identities=19% Similarity=0.145 Sum_probs=21.5
Q ss_pred EEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCH
Q 044303 255 GVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLET 296 (428)
Q Consensus 255 ~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~ 296 (428)
++..++|+|+.+. +++|||...+.|+.
T Consensus 23 P~v~i~I~G~~~~---------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVGGQPVT---------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEETTEEEE---------------EEECTTCSSCEECS
T ss_pred CEEEEEECCEEEE---------------EEEeCCCCeEEEcc
Confidence 4456888998654 68999999999985
No 63
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=31.40 E-value=36 Score=26.71 Aligned_cols=31 Identities=23% Similarity=0.171 Sum_probs=25.4
Q ss_pred cceEEEEeEEEEcCeEeeccccccccccCCCCCeEEeccccceecCH
Q 044303 250 AEYFIGVKSILISGNVVPLNKSLLSINKEGFGGTKISTVFPYTVLET 296 (428)
Q Consensus 250 ~~y~v~l~~i~v~~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~ 296 (428)
..|+=++. |+|+|+.+. +++|||+-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 46777778 999998754 68999999999884
No 64
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=31.32 E-value=47 Score=30.77 Aligned_cols=43 Identities=9% Similarity=0.029 Sum_probs=30.3
Q ss_pred CCceEEEEeeCCCCceEEEE---EEecCC---CceEEEEEecCCCceeecC
Q 044303 29 PKALVVPVTKDSSTLQYLTQ---IQQRTP---LVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 29 ~~~~~~Pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~wv~~ 73 (428)
.+..-+|+... ...|.++ |.||.- .....++||||++++++|.
T Consensus 180 g~l~~~p~~~~--~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 228 (329)
T 1oew_A 180 GSITYTAVSTK--QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPA 228 (329)
T ss_dssp SCCEEEECBCT--TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECH
T ss_pred cceEEEEccCC--CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCH
Confidence 34567788642 3456555 678862 3467899999999999985
No 65
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=30.86 E-value=44 Score=30.89 Aligned_cols=43 Identities=9% Similarity=-0.071 Sum_probs=29.9
Q ss_pred CCceEEEEeeCCCCceEEEE---EEecC-CCceEEEEEecCCCceeecC
Q 044303 29 PKALVVPVTKDSSTLQYLTQ---IQQRT-PLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 29 ~~~~~~Pl~~~~~~~~Y~~~---i~iGt-P~Q~~~v~~DTGSs~~wv~~ 73 (428)
.+..-+|+... ...|.++ |.||. +.....++||||++++++|.
T Consensus 177 g~l~~~p~~~~--~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~ 223 (323)
T 1bxo_A 177 GSLTYTGVDNS--QGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDD 223 (323)
T ss_dssp SCCEEEECBCT--TSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECH
T ss_pred CceEEEECCCC--CCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCH
Confidence 34466787642 3456555 66775 34567899999999999985
No 66
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=26.30 E-value=63 Score=30.83 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=27.6
Q ss_pred eEEEEeeCCCCceEEEE---EEecCC----CceEEEEEecCCCceeecC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRTP----LVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~wv~~ 73 (428)
.-+|+.. ...|.+. |.||.- .....+++|||++++++|.
T Consensus 234 ~~~pv~~---~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~ 279 (383)
T 2x0b_A 234 HYINLIK---TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGST 279 (383)
T ss_dssp EEEEBSS---TTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECH
T ss_pred EEEEcCC---CceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCH
Confidence 3456654 3456554 678863 3567999999999999984
No 67
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=26.09 E-value=1e+02 Score=28.41 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=27.6
Q ss_pred CceEEEEeeCCCCceEEE---EEEecCCC---ceEEEEEecCCCceeecC
Q 044303 30 KALVVPVTKDSSTLQYLT---QIQQRTPL---VPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~---~i~iGtP~---Q~~~v~~DTGSs~~wv~~ 73 (428)
+..-+|+.... .|.+ .|.||.-. ....++||||++++++|.
T Consensus 182 ~l~~~p~~~~~---~~~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~ 228 (342)
T 3pvk_A 182 SLIALPVTSDR---ELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQ 228 (342)
T ss_dssp CCEEEECCCSS---SCEEEEEEEEETTEEEEEEEEEEEECTTCSSEEECH
T ss_pred eeEEeecCccc---eEEEEEeEEEECCEEecCCCceEEEeCCCCCeecCH
Confidence 34567776532 4544 46787621 236899999999999984
No 68
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=25.33 E-value=70 Score=30.59 Aligned_cols=43 Identities=9% Similarity=0.078 Sum_probs=28.3
Q ss_pred CceEEEEeeCCCCceEEEE---EEecC------CCceE--------EEEEecCCCceeecC
Q 044303 30 KALVVPVTKDSSTLQYLTQ---IQQRT------PLVPV--------KLTLDLGGGFLWVNC 73 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~~---i~iGt------P~Q~~--------~v~~DTGSs~~wv~~ 73 (428)
...-+||.... ...|.++ |.||. |+..+ .++||||++++++|.
T Consensus 216 ~l~~~Pl~~~~-~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~ 275 (403)
T 3aup_A 216 DLAFTPLTITL-QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQ 275 (403)
T ss_dssp TEEEEECEECT-TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECH
T ss_pred ceeecccccCC-CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCH
Confidence 45678888753 3467665 66876 11112 189999999999984
No 69
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=24.96 E-value=70 Score=29.51 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=27.6
Q ss_pred eEEEEeeCCCCceEEEE---EEecCC-----CceEEEEEecCCCceeecCC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRTP-----LVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGtP-----~Q~~~v~~DTGSs~~wv~~~ 74 (428)
.-+|+.. ...|.++ |.||.- .....++||||++++++|..
T Consensus 181 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 228 (329)
T 1htr_B 181 YWAPVTQ---ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQ 228 (329)
T ss_dssp EEEEBCS---SSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGG
T ss_pred EEEECCC---CceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHH
Confidence 4456553 2456554 678751 35678999999999999854
No 70
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=24.23 E-value=63 Score=27.98 Aligned_cols=26 Identities=19% Similarity=0.077 Sum_probs=23.2
Q ss_pred EEEEEEecCCCceEEEEEecCCCceeec
Q 044303 45 YLTQIQQRTPLVPVKLTLDLGGGFLWVN 72 (428)
Q Consensus 45 Y~~~i~iGtP~Q~~~v~~DTGSs~~wv~ 72 (428)
-.+++.||. |....++|||.+++-+.
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIE 138 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CcEEEEECC--EEEeeeecccCCceeee
Confidence 478899998 99999999999999885
No 71
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=23.10 E-value=83 Score=31.02 Aligned_cols=39 Identities=18% Similarity=0.026 Sum_probs=27.6
Q ss_pred eEEEEeeCCCCceEEEE---EEecC-----CCceEEEEEecCCCceeecC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRT-----PLVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGt-----P~Q~~~v~~DTGSs~~wv~~ 73 (428)
.-+|+.. ...|.+. |.||. +.....+++|||++++++|.
T Consensus 223 ~~~pv~~---~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~ 269 (478)
T 1qdm_A 223 TYVPVTQ---KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPT 269 (478)
T ss_dssp EEEEEEE---ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECH
T ss_pred eEEeccC---CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCH
Confidence 4456654 2356555 67775 33568899999999999984
No 72
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=21.90 E-value=1e+02 Score=28.73 Aligned_cols=43 Identities=21% Similarity=0.048 Sum_probs=29.4
Q ss_pred CCceEeeceeCCCCCCCCCcCCCCCcceEEEEeEEEEc--CeEeeccccccccccCCCCCeEEeccccceecCHH
Q 044303 225 KSLIYTRLIRNPVSSAGASFEGESSAEYFIGVKSILIS--GNVVPLNKSLLSINKEGFGGTKISTVFPYTVLETS 297 (428)
Q Consensus 225 g~l~~tpl~~~~~~~~~~~~~~~~~~~y~v~l~~i~v~--~~~l~~~~~~~~~~~~~~~~~iiDSGTs~~~lp~~ 297 (428)
|.+...|+.... ...|.+ .|.|| .+.+ .++||||++.+++|..
T Consensus 5 g~~~~~~l~~~~------------~~~Y~~---~i~iGtP~q~~---------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFD------------LEEYAI---PVSIGTPGQDF---------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETT------------TTEEEE---EEEETTTTEEE---------------EEEEETTCCCCEEEBT
T ss_pred CccceEEeecCC------------CCEEEE---EEEECCCCcEE---------------EEEEcCCCCCeEECCC
Confidence 567777886532 356654 46777 3332 3789999999999863
No 73
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=21.85 E-value=76 Score=29.63 Aligned_cols=42 Identities=21% Similarity=0.172 Sum_probs=29.0
Q ss_pred CceEEEEeeCCCCceEEEE---EEecCC----CceEEEEEecCCCceeecCC
Q 044303 30 KALVVPVTKDSSTLQYLTQ---IQQRTP----LVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~wv~~~ 74 (428)
...-+|+... ..|.+. |.||.- .....++||||++++++|..
T Consensus 191 ~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~ 239 (351)
T 1tzs_A 191 SLNWVPVTKQ---AYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSD 239 (351)
T ss_dssp CCEEEECSEE---TTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEecCCC---ceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCHH
Confidence 3456677652 356554 678762 34578999999999999853
No 74
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=21.76 E-value=60 Score=30.10 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=26.6
Q ss_pred eEEEEeeCCCCceEEEE---EEecCC----CceEEEEEecCCCceeecC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRTP----LVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~wv~~ 73 (428)
.-+|+.. ...|.+. |.||.. +....++||||++.+++|.
T Consensus 191 ~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~ 236 (341)
T 3k1w_A 191 HYINLIK---TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGST 236 (341)
T ss_dssp EEEECSS---TTSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECH
T ss_pred EEEecCC---CCEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCH
Confidence 3445543 3456554 677763 3457899999999999985
No 75
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=21.46 E-value=80 Score=29.03 Aligned_cols=40 Identities=20% Similarity=0.048 Sum_probs=26.9
Q ss_pred eEEEEeeCCCCceEEE---EEEecCC----CceEEEEEecCCCceeecCC
Q 044303 32 LVVPVTKDSSTLQYLT---QIQQRTP----LVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~---~i~iGtP----~Q~~~v~~DTGSs~~wv~~~ 74 (428)
.-+|+.. ...|.+ .|.||.- +....++||||++++++|..
T Consensus 181 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 227 (323)
T 3cms_A 181 HWVPVTV---QQYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSS 227 (323)
T ss_dssp EEEECSS---BTTBEEEEEEEEETTEEEESTTCEEEEECTTCCSEEECHH
T ss_pred EEEECcc---CCeEEEEEeeEEECCEEeecCCCcEEEEecCCccEeCCHH
Confidence 3455543 235555 3778762 34578999999999999853
No 76
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=21.34 E-value=1.1e+02 Score=28.24 Aligned_cols=41 Identities=15% Similarity=0.254 Sum_probs=27.3
Q ss_pred CceEEEEeeCCCCceEEE---EEEecCCC--ceEEEEEecCCCceeecC
Q 044303 30 KALVVPVTKDSSTLQYLT---QIQQRTPL--VPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~---~i~iGtP~--Q~~~v~~DTGSs~~wv~~ 73 (428)
...-+|+.... .|.+ .|.||.-. ....++||||++++++|.
T Consensus 183 ~l~~~p~~~~~---~~~v~l~~i~v~g~~~~~~~~aiiDSGTt~~~lP~ 228 (342)
T 2qzx_A 183 SLVDLPITSEK---KLTVGLRSVNVRGRNVDANTNVLLDSGTTISYFTR 228 (342)
T ss_dssp CCEEEECCCSS---SCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECH
T ss_pred ceEEEeccCCc---eEEEEEeEEEECCEecCCCcCEEEeCCCCCEEcCH
Confidence 44567776532 4444 47787621 234689999999999984
No 77
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=21.20 E-value=50 Score=30.66 Aligned_cols=40 Identities=8% Similarity=0.042 Sum_probs=27.3
Q ss_pred eEEEEeeCCCCceEEEE---EEecCC---CceEEEEEecCCCceeecCC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRTP---LVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~wv~~~ 74 (428)
.-+|+.. ...|.++ |.||.- .....+++|||++++++|..
T Consensus 185 ~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~ 230 (330)
T 1yg9_A 185 TYVPLVG---DDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKA 230 (330)
T ss_dssp EEEEBSC---TTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHH
T ss_pred EEEECCC---CCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHH
Confidence 4456653 3455554 778762 34568999999999999853
No 78
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=20.12 E-value=88 Score=28.90 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=25.6
Q ss_pred eEEEEeeCCCCceEEE---EEEecCCC--ceEEEEEecCCCceeecCC
Q 044303 32 LVVPVTKDSSTLQYLT---QIQQRTPL--VPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~---~i~iGtP~--Q~~~v~~DTGSs~~wv~~~ 74 (428)
.-+|+... ..|.+ .|.||.-. ....++||||++++++|..
T Consensus 185 ~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 185 TALPVTSS---VELRVHLGSINFDGTSVSTNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEECCCS---SSCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECHH
T ss_pred EEEEccCC---CeEEEEEeEEEECCEeccCCccEEEeCCCCcEecCHH
Confidence 34565543 24444 47787621 2346899999999999843
No 79
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=20.08 E-value=74 Score=29.35 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=25.9
Q ss_pred eEEEEeeCCCCceEEEE---EEecCC---CceEEEEEecCCCceeecC
Q 044303 32 LVVPVTKDSSTLQYLTQ---IQQRTP---LVPVKLTLDLGGGFLWVNC 73 (428)
Q Consensus 32 ~~~Pl~~~~~~~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~wv~~ 73 (428)
.-+|+.. ...|.++ |.||.- .....++||||++++++|.
T Consensus 184 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 228 (329)
T 1dpj_A 184 TWLPVRR---KAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPS 228 (329)
T ss_dssp EEEECSS---BTTBEEEEEEEEETTEEEECSSCEEEECTTCSCEEECH
T ss_pred EEEEcCC---CceEEEEeeeEEECCeEecCCCccEEeeCCCCcEECCH
Confidence 3455543 2355554 678752 2346799999999999984
No 80
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=20.08 E-value=1.3e+02 Score=27.48 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=29.2
Q ss_pred CceEEEEeeCCCCceEEEE---EEecCC----CceEEEEEecCCCceeecCC
Q 044303 30 KALVVPVTKDSSTLQYLTQ---IQQRTP----LVPVKLTLDLGGGFLWVNCE 74 (428)
Q Consensus 30 ~~~~~Pl~~~~~~~~Y~~~---i~iGtP----~Q~~~v~~DTGSs~~wv~~~ 74 (428)
+..-+|+... ..|.+. |.||.- .+ ..++||||++++++|..
T Consensus 178 ~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~-~~aiiDSGTt~~~lp~~ 225 (324)
T 1am5_A 178 SIHWIPVTAE---KYWQVALDGITVNGQTAACEG-CQAIVDTGTSKIVAPVS 225 (324)
T ss_dssp CCEEEEEEEE---TTEEEEECEEEETTEECCCCC-EEEEECTTCSSEEECTT
T ss_pred ceEEEecCCC---cEEEEEEeEEEECCceeeccC-ceEEEecCCccEECCHH
Confidence 4566777652 356554 678761 22 78999999999999965
Done!