Query 044310
Match_columns 231
No_of_seqs 134 out of 1071
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 23:34:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044310.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044310hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 5.9E-45 2E-49 328.0 13.7 201 1-213 219-420 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.5E-44 1.2E-48 324.5 14.8 194 1-200 234-434 (439)
3 2rkv_A Trichothecene 3-O-acety 100.0 1.7E-41 5.7E-46 307.5 13.9 202 1-210 234-449 (451)
4 2e1v_A Acyl transferase; BAHD 100.0 1.2E-40 4.1E-45 302.4 15.9 188 1-200 249-444 (454)
5 2xr7_A Malonyltransferase; xen 100.0 8.2E-41 2.8E-45 303.3 14.6 188 1-200 243-444 (453)
6 3fot_A 15-O-acetyltransferase; 95.4 0.036 1.2E-06 50.6 7.7 80 2-81 283-363 (519)
7 1q9j_A PAPA5, polyketide synth 94.8 0.25 8.6E-06 42.6 10.9 95 1-105 216-314 (422)
8 2xhg_A Tyrocidine synthetase A 91.8 1 3.5E-05 39.3 9.9 98 2-106 239-337 (466)
9 1l5a_A Amide synthase, VIBH; n 90.2 1.3 4.3E-05 38.4 8.9 92 2-105 214-305 (436)
10 2jgp_A Tyrocidine synthetase 3 89.9 1 3.6E-05 40.1 8.2 93 2-105 309-401 (520)
11 4hvm_A Tlmii; PSI-biology, mid 82.7 1.2 4E-05 39.4 4.5 98 2-105 221-328 (493)
12 2vsq_A Surfactin synthetase su 79.9 6.1 0.00021 39.7 9.0 95 1-104 233-327 (1304)
13 2xl1_A Arginine attenuator pep 68.8 3.2 0.00011 20.8 1.8 19 21-39 6-24 (26)
14 2k1o_A Putative; repressor, tr 64.5 4.1 0.00014 25.4 2.1 44 1-51 20-63 (66)
15 1x93_A Hypothetical protein HP 44.6 18 0.00062 21.6 2.6 34 1-41 6-39 (55)
16 2p63_A Cell division control p 41.2 14 0.00047 22.6 1.7 36 65-103 19-54 (56)
17 2hew_F Tumor necrosis factor l 21.3 40 0.0014 24.8 1.6 18 214-231 69-86 (152)
18 1clv_I Protein (alpha-amylase 20.5 27 0.00093 18.2 0.4 8 68-75 24-31 (32)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=5.9e-45 Score=327.98 Aligned_cols=201 Identities=30% Similarity=0.524 Sum_probs=172.5
Q ss_pred CccCHHHHHHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCCcCCccchhhhh
Q 044310 1 FVFDTKKIDQLRAKVSSASV-PRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVAYL 79 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~~-~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~ 79 (231)
|+|++++|++||+.+.+... .++|+||+|+||+|+|+++||....++++++.+.++||+|+|++||+|++||||++..+
T Consensus 219 f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~ 298 (421)
T 2bgh_A 219 FVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLL 298 (421)
T ss_dssp EEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEE
T ss_pred EEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEE
Confidence 78999999999999976543 67999999999999999999865433357899999999999999999999999999999
Q ss_pred hcccCccccccHHHHHHHHHHHHHhhhhhhhhhhccchhhhcchhHHhhccccCCCceEEEeccCCCCCCCCccccccce
Q 044310 80 TAQASEKEAETLQDLVCSFRKAKADFSRNGLKNLLENKSIFDIPQSIKAKFEKDEVDFYTFSSIVNFPYYEVADFGWGKP 159 (231)
Q Consensus 80 ~~~~~~~e~~~L~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~~DFG~GkP 159 (231)
.+.++++++.+|+++|.+||+++.+++++|+++..+ +.+ . .... .+.+.+.+|||++|++|++ |||||||
T Consensus 299 ~~~~~~~~~~~l~~~a~~ir~ai~~~~~~~~~~~~~---~~~---~-~~~~--~~~~~~~vssw~~~~~y~~-DFGwGkP 368 (421)
T 2bgh_A 299 FAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLK---GMT---C-LYEL--EPQELLSFTSWCRLGFYDL-DFGWGKP 368 (421)
T ss_dssp EEEECTTCCCCGGGGHHHHHHHTCCCSSCHHHHHHH---HHH---H-HHTS--CGGGEEEEEEETTSCGGGC-CSSSCCC
T ss_pred EEEecccccccHHHHHHHHHHHHHHHHHHHHHHHHH---HHH---H-hhcc--CCCCeEEEeccccCCCccc-ccCCCcc
Confidence 888888767889999999999999999888886544 321 1 1111 1234699999999999999 9999999
Q ss_pred eeeecCccccCcEEEEEeCCCCCeEEEEEecCHhHHHHhhhcHHHHhhhccCCC
Q 044310 160 VHVTLPNYVLSNLIIIMDTNDGKGIEVLVTLSPEDMAFFERDQELLAFAAINPP 213 (231)
Q Consensus 160 ~~~~~~~~~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~~~~ 213 (231)
+++++...+.+|+++++|+++++|++|.|+|++++|++|++ +|.+|++.||+
T Consensus 369 ~~v~~~~~~~~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 369 LSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp SEEECCCCCSTTEEEEEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred CeecccccCcCCEEEEEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 99998876678999999999888999999999999999988 99999999985
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.5e-44 Score=324.52 Aligned_cols=194 Identities=21% Similarity=0.334 Sum_probs=167.5
Q ss_pred CccCHHHHHHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCCcCCccchhhhh
Q 044310 1 FVFDTKKIDQLRAKVSSAS-VPRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVAYL 79 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~-~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~ 79 (231)
|+|++++|++||+.+.+.. ..++|+||+|+||+|||++|||...+ ++++.+.++||+|+|++||+|++||||++..+
T Consensus 234 f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~ 311 (439)
T 4g22_A 234 FKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLPPGYFGNVIFTA 311 (439)
T ss_dssp EEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCCTTBCSCCEEEE
T ss_pred EEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCCCCcccceeehh
Confidence 7899999999999997653 46799999999999999999997644 58999999999999999999999999999999
Q ss_pred hcccCccc--cccHHHHHHHHHHHHHhhhhhhhhhhccchhhhcchhHH--h-hccccCCCceEEEeccCCCCCCCCccc
Q 044310 80 TAQASEKE--AETLQDLVCSFRKAKADFSRNGLKNLLENKSIFDIPQSI--K-AKFEKDEVDFYTFSSIVNFPYYEVADF 154 (231)
Q Consensus 80 ~~~~~~~e--~~~L~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~vssw~~~~~y~~~DF 154 (231)
.+.++++| +.+|+++|.+||+++.+++++|+++.++ |++..++. . ......+...+.+|||++|++|++ ||
T Consensus 312 ~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~-DF 387 (439)
T 4g22_A 312 TPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALD---YLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDA-DF 387 (439)
T ss_dssp CCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHH---HHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCC-CC
T ss_pred hcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHH---HHHhCccchhhcccCCcCcCCcEEEeecCcCCcccc-cc
Confidence 99999988 7899999999999999999999999888 77544322 0 011111123499999999999999 99
Q ss_pred cccceeeeecCccccCcEEEEEeCCCC-CeEEEEEecCHhHHHHhhh
Q 044310 155 GWGKPVHVTLPNYVLSNLIIIMDTNDG-KGIEVLVTLSPEDMAFFER 200 (231)
Q Consensus 155 G~GkP~~~~~~~~~~~g~~~i~p~~~~-~g~ev~v~L~~~~m~~l~~ 200 (231)
|||||+++++...+.+|.++++|++++ ||++|.|+|++++|++|++
T Consensus 388 GwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 388 GWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp SSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 999999999877667899999999754 5799999999999999986
No 3
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.7e-41 Score=307.50 Aligned_cols=202 Identities=21% Similarity=0.288 Sum_probs=170.1
Q ss_pred CccCHHHHHHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCCcCCccchhh
Q 044310 1 FVFDTKKIDQLRAKVSSAS---VPRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVA 77 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~---~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~ 77 (231)
|+|++++|++||+++.+.. ..++|+||+|+||+|||+++||....++++++.+.++||+|+|++ +|.+||||++.
T Consensus 234 f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~ 311 (451)
T 2rkv_A 234 FTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQN 311 (451)
T ss_dssp EEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEE
T ss_pred EEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCccccee
Confidence 7899999999999998653 357999999999999999999832123368999999999999998 89999999999
Q ss_pred hhhcccCccc--cccHHHHHHHHHHHHHhhhhhh-hhhhccchhhhcchhHHhhccc-----cCCCceEEEeccCCCCCC
Q 044310 78 YLTAQASEKE--AETLQDLVCSFRKAKADFSRNG-LKNLLENKSIFDIPQSIKAKFE-----KDEVDFYTFSSIVNFPYY 149 (231)
Q Consensus 78 ~~~~~~~~~e--~~~L~~~A~~Ir~ai~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~vssw~~~~~y 149 (231)
.+.+.++++| +.+|+++|.+||+++.+++.+| +++.++ |++...+. ..+. ..+. .+.+|||++|++|
T Consensus 312 ~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~-~~~~ssw~~~~~y 386 (451)
T 2rkv_A 312 MTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLAT---YLHNNPDK-SNVSLTADADPST-SVMLSSWAKVGLW 386 (451)
T ss_dssp EEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHH---HHHHCSCC-TTBCTTTTCCTTT-CEEEEECTTCCGG
T ss_pred eecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHH---HHhcCCCc-cccccccccCCCC-CEEEeccccCCcc
Confidence 9988888888 7899999999999999999888 888877 66543321 1111 1123 4999999999999
Q ss_pred CCcccc--ccceeeeecCcc-ccCcEEEEEeCCCCCeEEEEEecCHhHHHHhhhcHHHHhhhcc
Q 044310 150 EVADFG--WGKPVHVTLPNY-VLSNLIIIMDTNDGKGIEVLVTLSPEDMAFFERDQELLAFAAI 210 (231)
Q Consensus 150 ~~~DFG--~GkP~~~~~~~~-~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~ 210 (231)
++ ||| ||||++++.+.. +.+|+++++|++++||++|.|+|++++|++|++|++|++|++.
T Consensus 387 ~~-DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 387 DY-DFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp GC-CTTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred cc-ccCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 99 998 899999986543 4689999998766678999999999999999999999999864
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.2e-40 Score=302.42 Aligned_cols=188 Identities=21% Similarity=0.305 Sum_probs=157.1
Q ss_pred CccCHHHHHHHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCCcCCccchhhh
Q 044310 1 FVFDTKKIDQLRAKVSSASV--PRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVAY 78 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~~--~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~ 78 (231)
|+|++++|++||+.+.+... .++|+||+|+||+|||+++|| + ++++.+.++||+|+|++||+|++||||++..
T Consensus 249 f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~ 323 (454)
T 2e1v_A 249 FILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDRRARMKPPIPTAYFGNCVGG 323 (454)
T ss_dssp EEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEECGGGSSSCCCTTBCSCCEEE
T ss_pred EEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecchhccCCCCCcccccceeee
Confidence 78999999999999976432 579999999999999999998 2 5799999999999999999999999999999
Q ss_pred hhcccCccc--c-ccHHHHHHHHHHHHHhhhhhhhhhhccc--hhhhcchhHHhhccccCCCceEEEeccCCCCCCCCcc
Q 044310 79 LTAQASEKE--A-ETLQDLVCSFRKAKADFSRNGLKNLLEN--KSIFDIPQSIKAKFEKDEVDFYTFSSIVNFPYYEVAD 153 (231)
Q Consensus 79 ~~~~~~~~e--~-~~L~~~A~~Ir~ai~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~~D 153 (231)
+.+.++++| . .+|+++|.+||+++.+++++|+++.+.. ..|++.. ..+ . +...+.+|||++|++|++ |
T Consensus 324 ~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~----~~~-~-~~~~~~vssw~~~~~y~~-D 396 (454)
T 2e1v_A 324 CAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLV----SEG-M-PTTMTWVSGTPKLRFYDM-D 396 (454)
T ss_dssp EEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHH----HHC-C-CSEEEEEECCTTSCGGGC-C
T ss_pred EEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH----Hhh-c-CCceEEEecCCCCCcccc-c
Confidence 999888888 3 7899999999999999986665544331 1133211 122 1 223599999999999999 9
Q ss_pred ccccceeeeecCccccCcEEEEEeCCCCC-eEEEEEecCHhHHHHhhh
Q 044310 154 FGWGKPVHVTLPNYVLSNLIIIMDTNDGK-GIEVLVTLSPEDMAFFER 200 (231)
Q Consensus 154 FG~GkP~~~~~~~~~~~g~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~ 200 (231)
||||||+++++...+.+|.++++|+++++ |++|.|+|++++|++|++
T Consensus 397 FG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 397 FGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp SSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred ccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 99999999998776678999999987654 799999999999999965
No 5
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=8.2e-41 Score=303.32 Aligned_cols=188 Identities=19% Similarity=0.297 Sum_probs=160.3
Q ss_pred CccCHHHHHHHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHhccCC--C-CCCCceeEEEEeecccccCCCCCcCCccch
Q 044310 1 FVFDTKKIDQLRAKVSSASV--PRPSRVEALTALIWKCARAASRSN--L-GYSRPSLSVHAMNVRAVAETPLPDNSVGNS 75 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~~--~~~St~dal~A~iW~~~~~Ar~~~--~-~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~ 75 (231)
|+|++++|++||+.+.+... .++|+||+|+||+|||+++||... . ++++++.+.++||+|+|++||+|++||||+
T Consensus 243 f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~ 322 (453)
T 2xr7_A 243 FIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNA 322 (453)
T ss_dssp EEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCC
T ss_pred EEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccce
Confidence 78999999999999976432 579999999999999999999752 1 235789999999999999999999999999
Q ss_pred hhhhhcccCccc--c-ccHHHHHHHHHHHHHh--hhhh-hhhhhccchhhhcchhHHhhccccCCCceEEEeccCCCCCC
Q 044310 76 VAYLTAQASEKE--A-ETLQDLVCSFRKAKAD--FSRN-GLKNLLENKSIFDIPQSIKAKFEKDEVDFYTFSSIVNFPYY 149 (231)
Q Consensus 76 ~~~~~~~~~~~e--~-~~L~~~A~~Ir~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y 149 (231)
+..+.+.++++| . .+|+++|.+||+++.+ ++++ |+++ + |++..+ .+. +...+.+|||++|++|
T Consensus 323 ~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~---~~~~~~----~~~--~~~~~~vssw~~~~~y 391 (453)
T 2xr7_A 323 LVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--S---WFKEYD----KVD--AKRSLSVAGSPKLDLY 391 (453)
T ss_dssp CCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C---TTSCCC----CSC--GGGEEEECSCSSCCGG
T ss_pred eeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--H---HHHHHH----hhc--cCCcEEEeccccCCcc
Confidence 999998888887 3 7999999999999999 5777 8887 5 665432 111 1235999999999999
Q ss_pred CCccccccceeeeecCccccCc--EEEEEeCCCCC-eEEEEEecCHhHHHHhhh
Q 044310 150 EVADFGWGKPVHVTLPNYVLSN--LIIIMDTNDGK-GIEVLVTLSPEDMAFFER 200 (231)
Q Consensus 150 ~~~DFG~GkP~~~~~~~~~~~g--~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~ 200 (231)
++ |||||||+++++...+.+| .++++|+++++ |++|.|+|++++|++|++
T Consensus 392 ~~-DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 392 AA-DFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp GC-CCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH
T ss_pred cc-ccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH
Confidence 99 9999999999987666778 88888887654 799999999999999965
No 6
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=95.44 E-value=0.036 Score=50.65 Aligned_cols=80 Identities=11% Similarity=-0.008 Sum_probs=57.6
Q ss_pred ccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhccCC-CCCCCceeEEEEeecccccCCCCCcCCccchhhhhh
Q 044310 2 VFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAASRSN-LGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVAYLT 80 (231)
Q Consensus 2 ~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar~~~-~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~ 80 (231)
.|++++.++|++.|.+..++.+|-..++.|.+-.++.+..... ..........++||+|+++.++.-.+|||.+.....
T Consensus 283 ~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~ 362 (519)
T 3fot_A 283 KLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAV 362 (519)
T ss_dssp ECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEE
T ss_pred EcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeee
Confidence 6899999999999987644578999999777766666542211 111346889999999999987655678888776544
Q ss_pred c
Q 044310 81 A 81 (231)
Q Consensus 81 ~ 81 (231)
.
T Consensus 363 ~ 363 (519)
T 3fot_A 363 V 363 (519)
T ss_dssp E
T ss_pred e
Confidence 3
No 7
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=94.76 E-value=0.25 Score=42.58 Aligned_cols=95 Identities=17% Similarity=0.112 Sum_probs=64.4
Q ss_pred CccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCC----cCCccchh
Q 044310 1 FVFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLP----DNSVGNSV 76 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP----~~Y~GN~~ 76 (231)
+.++++..++|++.|... .+|.+.++.|.+-..+.+.+.. . .....+..+++.|....|+++ .+.+|.++
T Consensus 216 ~~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~l~r~~~~-~--~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~ 289 (422)
T 1q9j_A 216 LWLSKQQTSDLMAFGREH---RLSLNAVVAAAILLTEWQLRNT-P--HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAAS 289 (422)
T ss_dssp ECCCHHHHHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHTC-S--SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEE
T ss_pred EEeCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHhcccC-C--CceEEEeeeeecccccCCCCChhhhhhhheeee
Confidence 357889999999988753 5789999988776666655221 1 367899999999998766543 23444444
Q ss_pred hhhhcccCccccccHHHHHHHHHHHHHhh
Q 044310 77 AYLTAQASEKEAETLQDLVCSFRKAKADF 105 (231)
Q Consensus 77 ~~~~~~~~~~e~~~L~~~A~~Ir~ai~~~ 105 (231)
. .+++..+.++.+++..+++.+...
T Consensus 290 n----~lp~~~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 290 Y----LAEIGPNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp E----EECCCSSCCHHHHHHHHHHHHHHH
T ss_pred e----eeeccCCCCHHHHHHHHHHHHHHH
Confidence 2 223332456778888888777753
No 8
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=91.76 E-value=1 Score=39.34 Aligned_cols=98 Identities=12% Similarity=0.008 Sum_probs=66.4
Q ss_pred ccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCC-CCCcCCccchhhhhh
Q 044310 2 VFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAET-PLPDNSVGNSVAYLT 80 (231)
Q Consensus 2 ~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~p-plP~~Y~GN~~~~~~ 80 (231)
.++++..++|++.+... ..+|.++++.|-+-..+.+... .....+.++++.|....+ +--.+-+|+++-...
T Consensus 239 ~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lp 311 (466)
T 2xhg_A 239 RLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDIIEQANVARTVGWFTSQYP 311 (466)
T ss_dssp ECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEE
T ss_pred EcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCccccCCCccccccceeeecc
Confidence 57888889998877532 2478899888876666665543 256899999999976421 122456666655444
Q ss_pred cccCccccccHHHHHHHHHHHHHhhh
Q 044310 81 AQASEKEAETLQDLVCSFRKAKADFS 106 (231)
Q Consensus 81 ~~~~~~e~~~L~~~A~~Ir~ai~~~~ 106 (231)
....+..+.++.+++..|++.+..+.
T Consensus 312 lr~~~~~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 312 VLLDLKQTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEECSCCCSHHHHHHHHHHHHHHSG
T ss_pred EEEecCCCCCHHHHHHHHHHHHHhCc
Confidence 44444335678999999998887753
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=90.21 E-value=1.3 Score=38.36 Aligned_cols=92 Identities=14% Similarity=0.039 Sum_probs=64.2
Q ss_pred ccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCCcCCccchhhhhhc
Q 044310 2 VFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVAYLTA 81 (231)
Q Consensus 2 ~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~ 81 (231)
.++++..++|++.|... .+|.+.++.|.+-..+.+-.. ....+..+++.|.. + --.+-+|+++-....
T Consensus 214 ~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~L~~~~g------~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lpl 281 (436)
T 1l5a_A 214 TLNSQLNHLLLKLANAN---QIGWPDALVALCALYLESAEP------DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPL 281 (436)
T ss_dssp ECCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHST------TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEE
T ss_pred ecCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHhhC------CceEEeeecccCCC--h-HHhcCcceEEEEEEE
Confidence 57888899999988764 478999888876555555432 45889999999975 1 224556666555444
Q ss_pred ccCccccccHHHHHHHHHHHHHhh
Q 044310 82 QASEKEAETLQDLVCSFRKAKADF 105 (231)
Q Consensus 82 ~~~~~e~~~L~~~A~~Ir~ai~~~ 105 (231)
...+..+.++.+++..+++.+...
T Consensus 282 r~~~~~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 282 LRLSAQQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp ECCCCTTCBHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Confidence 454443567888888888877754
No 10
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=89.86 E-value=1 Score=40.09 Aligned_cols=93 Identities=12% Similarity=0.059 Sum_probs=64.6
Q ss_pred ccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCCcCCccchhhhhhc
Q 044310 2 VFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVAYLTA 81 (231)
Q Consensus 2 ~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~ 81 (231)
.++++..++|++.|... .+|.+.++.|-+-..+.+-.. .....++.+++.|..-+ -.+-+|+++-....
T Consensus 309 ~l~~~~~~~l~~~a~~~---~~T~~~~l~aa~a~~L~~~~~-----~~dv~~g~~~~gR~~~~---~~~~vG~f~n~lpl 377 (520)
T 2jgp_A 309 GAGKALTEGLHQLAQAT---GTTLYMVLLAAYNVLLAKYAG-----QEDIIVGTPITGRSHAD---LEPIVGMFVNTLAM 377 (520)
T ss_dssp ECCHHHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHHHHT-----CSCEEEEEEECCCCSGG---GTTCCSCCCEEEEE
T ss_pred eCCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----CCCeEEEeccCCCCchh---hhccEEeeeeeeeE
Confidence 56788889999988753 478899888866555555543 35789999999997521 24566666655545
Q ss_pred ccCccccccHHHHHHHHHHHHHhh
Q 044310 82 QASEKEAETLQDLVCSFRKAKADF 105 (231)
Q Consensus 82 ~~~~~e~~~L~~~A~~Ir~ai~~~ 105 (231)
...+..+.++.+++..+++.+...
T Consensus 378 r~~~~~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 378 RNKPQREKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp EECCCTTSBHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHHHHHH
Confidence 555443567888888888877653
No 11
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=82.68 E-value=1.2 Score=39.44 Aligned_cols=98 Identities=10% Similarity=0.026 Sum_probs=58.7
Q ss_pred ccCHHHHHHHHHHhhcCCCCCCC--HHHHHHHHHHHHHHHhccC------CCCCCCceeEEEEeecccccCCCCCcCCcc
Q 044310 2 VFDTKKIDQLRAKVSSASVPRPS--RVEALTALIWKCARAASRS------NLGYSRPSLSVHAMNVRAVAETPLPDNSVG 73 (231)
Q Consensus 2 ~fs~~~l~~LK~~~~~~~~~~~S--t~dal~A~iW~~~~~Ar~~------~~~~~~~~~l~~~vd~R~rl~pplP~~Y~G 73 (231)
.++++..++|++.|... .+| .+.++.|-+-..+.+-+.- .........+..+++.|..- --.+.+|
T Consensus 221 ~l~~~~~~~l~~~a~~~---~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~~~~~vG 294 (493)
T 4hvm_A 221 RVPGSRWQALTEPGGPL---GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---QLGSVVG 294 (493)
T ss_dssp EEEHHHHHHHHCC---------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---TCCSBCS
T ss_pred EcCHHHHHHHHHHHHHc---CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---chhcCeE
Confidence 46777788888776643 478 8988888665555544110 00113678999999999762 2356677
Q ss_pred chhhhhhcccCccc--cccHHHHHHHHHHHHHhh
Q 044310 74 NSVAYLTAQASEKE--AETLQDLVCSFRKAKADF 105 (231)
Q Consensus 74 N~~~~~~~~~~~~e--~~~L~~~A~~Ir~ai~~~ 105 (231)
+++-.......... +.++.+++..+++.+...
T Consensus 295 ~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 295 PLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp CCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHH
T ss_pred eeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHH
Confidence 77655555555544 467888888888877754
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=79.94 E-value=6.1 Score=39.68 Aligned_cols=95 Identities=13% Similarity=0.070 Sum_probs=63.9
Q ss_pred CccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCceeEEEEeecccccCCCCCcCCccchhhhhh
Q 044310 1 FVFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAASRSNLGYSRPSLSVHAMNVRAVAETPLPDNSVGNSVAYLT 80 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~ 80 (231)
|.++++..++||+.|... .+|.+.++.|-+-..+.|-.. .+...+..+++.|..-.+.+ ++-+|+.+-...
T Consensus 233 ~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~tg-----~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlp 303 (1304)
T 2vsq_A 233 FSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRYQQ-----SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVP 303 (1304)
T ss_dssp ECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHHT-----CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEE
T ss_pred EecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----CCCEEEEEEeCCCCccchhh-hcccccceeEEE
Confidence 357888999999998864 478899888865555554432 35789999999997533222 345555554444
Q ss_pred cccCccccccHHHHHHHHHHHHHh
Q 044310 81 AQASEKEAETLQDLVCSFRKAKAD 104 (231)
Q Consensus 81 ~~~~~~e~~~L~~~A~~Ir~ai~~ 104 (231)
.+..+..+.++.++...+++....
T Consensus 304 lr~~~~~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 304 RRVKLSEGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHH
T ss_pred EEecCCCCCcHHHHHHHHHHHHHH
Confidence 444443356788888888877665
No 13
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=68.77 E-value=3.2 Score=20.75 Aligned_cols=19 Identities=16% Similarity=0.351 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 044310 21 PRPSRVEALTALIWKCARA 39 (231)
Q Consensus 21 ~~~St~dal~A~iW~~~~~ 39 (231)
+-+++.|-|+-|+||++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3468899999999998763
No 14
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=64.47 E-value=4.1 Score=25.37 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=32.0
Q ss_pred CccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCce
Q 044310 1 FVFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAASRSNLGYSRPS 51 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar~~~~~~~~~~ 51 (231)
|+||+|+-+.|.+.|.++. |.+..+|=|.+.++-....+.++.+
T Consensus 20 ~Y~SkEey~~L~klA~eE~-------eSV~sfIKR~IlK~l~ykkgtnqds 63 (66)
T 2k1o_A 20 FYLSKEEHDVLRRLADEEV-------ESVNSFVKRHILKTIIYKKGTNQDS 63 (66)
T ss_dssp EEEEHHHHHHHHHHHHTTC-------SCHHHHHHHHHHHHHCSSCSSCCCS
T ss_pred EEecHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhcCCCccc
Confidence 6899999999999998653 3367778888888866544434443
No 15
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=44.59 E-value=18 Score=21.64 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=24.0
Q ss_pred CccCHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHhc
Q 044310 1 FVFDTKKIDQLRAKVSSASVPRPSRVEALTALIWKCARAAS 41 (231)
Q Consensus 1 F~fs~~~l~~LK~~~~~~~~~~~St~dal~A~iW~~~~~Ar 41 (231)
|+||+++-+.|++.+.++. .. +..+|=|.+.++-
T Consensus 6 ~Y~SkEey~~L~klA~eE~-eS------V~sfIKR~IlK~l 39 (55)
T 1x93_A 6 LYFSDEQYQKLEKMANEEE-ES------VGSYIKRYILKAL 39 (55)
T ss_dssp EEECHHHHHHHHHHHHHTT-SC------TTHHHHHHHHHHH
T ss_pred EEecHHHHHHHHHHHHHHH-HH------HHHHHHHHHHHHH
Confidence 6899999999999998753 22 3344556666554
No 16
>2p63_A Cell division control protein 4; ubiquitination, helix bundle, SCF complex, cell cycle; 2.67A {Saccharomyces cerevisiae}
Probab=41.23 E-value=14 Score=22.56 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=28.1
Q ss_pred CCCCcCCccchhhhhhcccCccccccHHHHHHHHHHHHH
Q 044310 65 TPLPDNSVGNSVAYLTAQASEKEAETLQDLVCSFRKAKA 103 (231)
Q Consensus 65 pplP~~Y~GN~~~~~~~~~~~~e~~~L~~~A~~Ir~ai~ 103 (231)
..+|+.+|-|.++...+.+...| |+++...|++.++
T Consensus 19 ~~lp~~~~knLiF~Lvs~m~Rse---LSDl~TlikDNLK 54 (56)
T 2p63_A 19 NNLPHAYFKNLLFRLVANMDRSE---LSDLGTLIKDNLK 54 (56)
T ss_dssp GGSCTTHHHHHHHHHHHHCCHHH---HHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHhccHHH---HHHHHHHHHhhhc
Confidence 34788888998888888776655 8888888887665
No 17
>2hew_F Tumor necrosis factor ligand superfamily member 4; trimer, TNFSF, cytokine; HET: NAG; 1.45A {Mus musculus} SCOP: b.22.1.1 PDB: 2hey_F
Probab=21.32 E-value=40 Score=24.81 Aligned_cols=18 Identities=28% Similarity=0.613 Sum_probs=14.8
Q ss_pred ceeeecccCCCCccccCC
Q 044310 214 VLDVSIRKNESPLLISSL 231 (231)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~ 231 (231)
=+++-.||++.||.|++|
T Consensus 69 sI~l~YRk~~~plf~~~L 86 (152)
T 2hew_F 69 KIDLHFREDHNPISIPML 86 (152)
T ss_dssp CEEEECCTTSCCEEECCC
T ss_pred EEEEEEecCCCccchhhh
Confidence 368899999999887765
No 18
>1clv_I Protein (alpha-amylase inhibitor); insect alpha-amylase inhibitor, amaranthus hypochondriacus, yellow MEAL WORM, knottin, hydrolase; 2.00A {Tenebrio molitor} SCOP: g.3.2.1 PDB: 1htx_A 1qfd_A
Probab=20.49 E-value=27 Score=18.19 Aligned_cols=8 Identities=25% Similarity=0.430 Sum_probs=6.3
Q ss_pred CcCCccch
Q 044310 68 PDNSVGNS 75 (231)
Q Consensus 68 P~~Y~GN~ 75 (231)
-.+|+||+
T Consensus 24 tsdyygnc 31 (32)
T 1clv_I 24 TSDYYGNC 31 (32)
T ss_dssp SCSSSEEB
T ss_pred cccccccC
Confidence 35799997
Done!