Your job contains 1 sequence.
>044314
MEIEKKMRKVLKFQTLFLSQHNQTLPVSRLDFLARRVGFKRQEAGSFLLKFPHVFEIYEH
PVQRILYCRLTRKALLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIARTEF
GLPEDFEYSVVLKNAQFFRLFNAKESTEKYIELVGRDPSLAVCAIEKVREKEYRERGIDA
EDIRFSFLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGYDLRSLEAQKRMEKRAVA
TIHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTRGNHGKLHTVFLR
EAYRKGELLEPNDLYLARRKLGELVLMSPRKVKMDTELVRNRRDRHDGGGYMGRSTVVHA
NNGFDNFGVKENAGGDQKGDADLDSDLGSNVESDTSDENDDYDSVETIDAEDYDMGM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044314
(417 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504955534 - symbol:RPD1 "ROOT PRIMORDIUM DEFEC... 1410 2.8e-144 1
TAIR|locus:2009230 - symbol:AT1G06440 species:3702 "Arabi... 579 3.3e-56 1
TAIR|locus:4515103321 - symbol:WTF1 "what's this factor?"... 412 1.6e-38 1
TAIR|locus:2042561 - symbol:AT2G31290 species:3702 "Arabi... 364 2.0e-33 1
TAIR|locus:2207380 - symbol:AT1G79120 species:3702 "Arabi... 361 4.1e-33 1
TAIR|locus:2012981 - symbol:AT1G71850 "AT1G71850" species... 342 4.2e-31 1
TAIR|locus:2166305 - symbol:emb1692 "embryo defective 169... 303 8.6e-26 1
TAIR|locus:2064940 - symbol:WTF9 "AT2G39120" species:3702... 280 1.2e-23 1
TAIR|locus:2138738 - symbol:AT4G08940 species:3702 "Arabi... 243 2.2e-18 1
>TAIR|locus:504955534 [details] [associations]
symbol:RPD1 "ROOT PRIMORDIUM DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0010102 "lateral root morphogenesis"
evidence=IMP] GO:GO:0008285 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016787 GO:GO:0010102 InterPro:IPR021099 Pfam:PF11955
EMBL:AB189464 IPI:IPI00532796 RefSeq:NP_680759.1 UniGene:At.31579
STRING:Q689D6 EnsemblPlants:AT4G33495.1 GeneID:829487
KEGG:ath:AT4G33495 TAIR:At4g33495 eggNOG:NOG278294
HOGENOM:HOG000243533 InParanoid:Q689D6 OMA:RARERHY
ProtClustDB:CLSN2690356 Genevestigator:Q689D6 Uniprot:Q689D6
Length = 409
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 266/344 (77%), Positives = 310/344 (90%)
Query: 1 MEIEKKMRKVLKFQTLFLSQHNQTLPVSRLDFLARRVG--FKRQEAGSFLLKFPHVFEIY 58
ME+EKK+RKV+KF +L LSQ N T+ +S LD LARR+G FK+ E G+FLLKFPHVFEIY
Sbjct: 56 MEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIY 115
Query: 59 EHPVQRILYCRLTRKALLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIART 118
EHPVQRILYCRLTRKAL QI E +A+ QIP+AVTRLRKL+MMSN+G +RLEHVRIART
Sbjct: 116 EHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIART 175
Query: 119 EFGLPEDFEYSVVLKNAQFFRLFNAKESTEKYIELVGRDPSLAVCAIEKVREKEYRERGI 178
EFGLPEDFEYSV+LK+ QFFRL + +E+ +KYIE+V +DP+L++CAIE+VRE EYR +GI
Sbjct: 176 EFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGI 235
Query: 179 DAEDIRFSFLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGYDLRSLEAQKRMEKRA 238
DAED+RFSF+VNFPPGFKIGKY+RIAVWKWQR+PYWSPYED+SGYDLRS+EAQ R+EKR+
Sbjct: 236 DAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRS 295
Query: 239 VATIHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTRGNHGKLHTVF 298
VA IHELL+LTVEKKITLERIAHFR MNLPKKLKEFLLQHQGIFYISTRGN+GKLHTVF
Sbjct: 296 VACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVF 355
Query: 299 LREAYRKGELLEPNDLYLARRKLGELVLMSPRKVKMDTELVRNR 342
LRE Y++GEL+EPND+YLARR+L ELVLMSPRK K+D ELVR R
Sbjct: 356 LREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRYR 399
>TAIR|locus:2009230 [details] [associations]
symbol:AT1G06440 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016787 EMBL:AC007592
InterPro:IPR021099 Pfam:PF11955 HOGENOM:HOG000243533 EMBL:BT015739
EMBL:BT021137 EMBL:AK228605 IPI:IPI00516223 RefSeq:NP_172132.1
UniGene:At.42341 UniGene:At.74099 EnsemblPlants:AT1G06440.1
GeneID:837156 KEGG:ath:AT1G06440 TAIR:At1g06440 eggNOG:NOG241944
InParanoid:Q9SHI9 OMA:EPNTHIL PhylomeDB:Q9SHI9
ProtClustDB:CLSN2682318 Genevestigator:Q9SHI9 Uniprot:Q9SHI9
Length = 390
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 135/334 (40%), Positives = 193/334 (57%)
Query: 1 MEIEKKMRKVLKFQTLFLSQHNQTLPVSRLDFLAR---RVGFKRQEAGSFLLKFPHVFEI 57
M+ K + KV+ Q L L+ P ++FL+R ++ R A SFL K+PH+F +
Sbjct: 44 MDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLHLNRG-AASFLRKYPHIFHV 102
Query: 58 YEHPVQRILYCRLTRKALLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIAR 117
PV+ +CRLT A+ QE A+ A + V RL +LL MS S + L V
Sbjct: 103 LYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVRLLSMSISKSIPLRAVFKVW 162
Query: 118 TEFGLPEDFEYSVVLKNAQFFRLFNAKESTEKYIELVGRDPSLAV--CAIEKVREKEYRE 175
E GLP+DFE SV+ KN F+L + ES +ELV + A+EK R E +
Sbjct: 163 RELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEEKRLEFEAAVEKWRVVECSK 222
Query: 176 R--GIDAEDIRFSFLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGYDLRSLEAQKR 233
+D +I+FSF ++PPG ++ K ++ V +WQR+PY PYED+ G +S
Sbjct: 223 EDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYVGPYEDMVGKK-KSRSGVMG 281
Query: 234 MEKRAVATIHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTRGNHGK 293
+EKRAVA HE L LTVEK + +E+I+HFR + +++ L H G+FY+ST+G K
Sbjct: 282 IEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRDLFLDHPGMFYVSTKG---K 338
Query: 294 LHTVFLREAYRKGELLEPNDLYLARRKLGELVLM 327
HTVFLREAY +G L++PN +Y ARRKL +LVL+
Sbjct: 339 RHTVFLREAYERGRLIDPNPVYDARRKLLDLVLL 372
>TAIR|locus:4515103321 [details] [associations]
symbol:WTF1 "what's this factor?" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] EMBL:CP002687 GO:GO:0016787 EMBL:DQ653402
IPI:IPI00531143 RefSeq:NP_001118908.1 UniGene:At.47990 PRIDE:A0MFS5
EnsemblPlants:AT4G01037.1 GeneID:6240517 KEGG:ath:AT4G01037
TAIR:At4g01037 eggNOG:NOG312847 OMA:RIMLLRE PhylomeDB:A0MFS5
ProtClustDB:CLSN2695822 Genevestigator:A0MFS5 InterPro:IPR021099
Pfam:PF11955 Uniprot:A0MFS5
Length = 528
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 129/416 (31%), Positives = 203/416 (48%)
Query: 4 EKKMRKVLKFQTLFLSQHNQTLPVSRLDFLARRVGFKRQEAGSFLL-KFPHVFEIYEHPV 62
+KK++ VL + + +SQ ++ + + L R +G K++ LL K+P VFEI E
Sbjct: 91 DKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEEGA 150
Query: 63 QRILYCRLTRKALLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIARTEFGL 122
+ + ++T +A E + N V +LRKL+MMS + LE + +T+ GL
Sbjct: 151 YSLRF-KMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGL 209
Query: 123 PEDFEYSVVLKNAQFFRLFNAKESTEKYIELVGRDPSLAVCAIE------KVREKEYRER 176
P +F ++ + Q+FR+ +EL DP LAV A E + RE E R
Sbjct: 210 PLEFRDTICQRYPQYFRVVPTPRGPA--LELTHWDPELAVSAAELSEDDNRTRESEERNL 267
Query: 177 GIDAEDIRFSFLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGYDLRSLEAQKRMEK 236
ID +F+ V P G + K + +++ + Y SPY+D S LRS +K EK
Sbjct: 268 IIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDFS--HLRSGTLEK--EK 321
Query: 237 RAVATIHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTRGNHGKLHT 296
A IHELL+LT EK+ ++ + HFR ++L+ L++H +FY+S +G +
Sbjct: 322 HACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERD---S 378
Query: 297 VFLREAYRKGELLEPNDLYLARRKLGELVLMS--PRK--VKMDTELVRNRRDRHDGGGYM 352
VFLREAYR EL++ + L L + K+ LV + PR+ + D E R DG
Sbjct: 379 VFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEE---GREVEIDGSDAD 435
Query: 353 GRSTVVHAN----NGFDNFGVKENAGGDQKGDADLDS---DLGSNVESDTSDENDD 401
G ++ + D + E+ G D GD D D+ N + D DE +D
Sbjct: 436 GEEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEEDVPPNFDDDDEDEEED 491
>TAIR|locus:2042561 [details] [associations]
symbol:AT2G31290 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002685
GO:GO:0016787 EMBL:AC006593 InterPro:IPR021099 Pfam:PF11955
EMBL:AY074309 EMBL:AY096488 IPI:IPI00529360 PIR:H84718
RefSeq:NP_001031455.1 RefSeq:NP_180687.1 UniGene:At.66418
EnsemblPlants:AT2G31290.1 EnsemblPlants:AT2G31290.2 GeneID:817686
KEGG:ath:AT2G31290 TAIR:At2g31290 InParanoid:Q9SJW7 OMA:EGLHEYN
PhylomeDB:Q9SJW7 ProtClustDB:CLSN2683137 ArrayExpress:Q9SJW7
Genevestigator:Q9SJW7 Uniprot:Q9SJW7
Length = 415
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 105/315 (33%), Positives = 159/315 (50%)
Query: 67 YCRLTRKALLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIARTEFGLPEDF 126
YCRLT+ + +E+E+ + Q P RL KLLM+S + L + + + FG P+D+
Sbjct: 101 YCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVKLNEFKRSFGFPDDY 160
Query: 127 EYSVVLKNAQFFRLFN-AKESTEKYIELVGRDPSLAVCAIEKVREKEYRERGIDAEDIRF 185
+V K + FRL N + + IEL+ P LAV A+E +K +E
Sbjct: 161 VIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEAAAKK------CGSEP--- 211
Query: 186 SFLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGYDLRSLEAQKRMEKRAVATIHEL 245
SF + P + + R ++ PY SPYED G DL +E K EKR+V +HEL
Sbjct: 212 SFSCSLPSTWT-KPWERFM--EFNAFPYISPYED-HG-DL--VEGSKESEKRSVGLVHEL 264
Query: 246 LTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTRGNHGKLHTVFLREAYRK 305
L+LT+ KK+++ +++HF+ LP+KL LL+H GIFY+ GN ++HTV LRE Y
Sbjct: 265 LSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYV---GNKYQVHTVILREGYNG 321
Query: 306 GELLEPNDLYLARRKLGELVLMSPRKVKMDTELVRNRRDRHDGGGYMGRSTVVHANNGFD 365
EL+ + L + + K GEL+ + L + R G + + V + D
Sbjct: 322 SELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESL-KPVVRKKDRNHD 380
Query: 366 NFGVKENAG-GDQKG 379
V E GD+ G
Sbjct: 381 RDDVDEEENHGDRPG 395
>TAIR|locus:2207380 [details] [associations]
symbol:AT1G79120 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016787 EMBL:AC002986
InterPro:IPR021099 Pfam:PF11955 EMBL:AY773833 IPI:IPI00522769
PIR:T01043 RefSeq:NP_178033.1 UniGene:At.50886 PRIDE:O64539
EnsemblPlants:AT1G79120.1 GeneID:844253 KEGG:ath:AT1G79120
TAIR:At1g79120 eggNOG:NOG279247 HOGENOM:HOG000240299
InParanoid:O64539 OMA:VFLKEAY PhylomeDB:O64539
ProtClustDB:CLSN2679815 ArrayExpress:O64539 Genevestigator:O64539
Uniprot:O64539
Length = 413
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 109/355 (30%), Positives = 182/355 (51%)
Query: 1 MEIEKKMRKVLKFQTLFLSQHNQTLPVSRLDFLARRVGFKRQ-EAGSFLLKFPHVFEI-- 57
+++ KK +L+ +++ +Q + +L + L+ + VGF + + + K+P +F +
Sbjct: 72 IDLNKKPSLILQLKSIIQAQKHGSLLLRDLE---KHVGFVHKWNLMAAIEKYPTIFYVGG 128
Query: 58 -YEHPVQRILYCRLTRKALLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIA 116
++ P + LT KA +E +A + P V LRKLLMMS + LE V
Sbjct: 129 GHKEPP----FVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVDCRVPLEKVEFI 184
Query: 117 RTEFGLPEDFEYSVVLKNAQFFRL--FNAKESTEKYIELVGRDPSLAVCAIEKVREKE-Y 173
++ GLP+DF+ +++ K +FF L N K + + L D SLA+ A E +E +
Sbjct: 185 QSAMGLPQDFKSTLIPKYTEFFSLKVINGKVN----LVLENWDSSLAITAREDRLSREGF 240
Query: 174 RERGIDAEDIRFS----------FLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGY 223
E D + +R + F ++FPPGF+ Y KWQ++ + SPY + +
Sbjct: 241 SESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSPYLNARRF 300
Query: 224 DLRSLEAQKRMEKRAVATIHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIF 283
D A + KR VA +HELL+LT+EK++T ++ F LP +L L++HQGIF
Sbjct: 301 DA----ADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQGIF 356
Query: 284 YISTRGNHGKLHTVFLREAYRKGELLEPNDLYLARRKLGELVLMSPRKVKMDTEL 338
YI+ +G G TVFL++AY L+E L L + + L ++V + E+
Sbjct: 357 YITNKGARG---TVFLKDAYAGSNLIEKCPLLLFHDRF--VALCGRKEVNLSNEM 406
>TAIR|locus:2012981 [details] [associations]
symbol:AT1G71850 "AT1G71850" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
EMBL:CP002684 GO:GO:0005739 GO:GO:0016787 EMBL:AC012654
InterPro:IPR021099 Pfam:PF11955 EMBL:AK226624 IPI:IPI00528408
PIR:B96741 RefSeq:NP_177330.1 UniGene:At.52483 STRING:Q9M9G1
PRIDE:Q9M9G1 EnsemblPlants:AT1G71850.1 GeneID:843515
KEGG:ath:AT1G71850 TAIR:At1g71850 InParanoid:Q9M9G1 OMA:DITEKRT
PhylomeDB:Q9M9G1 ProtClustDB:CLSN2720513 Genevestigator:Q9M9G1
Uniprot:Q9M9G1
Length = 470
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 113/408 (27%), Positives = 195/408 (47%)
Query: 1 MEIEKKMRKVLKFQTLFLSQHNQTLPVSRLDFL--ARRVGFKRQEAGSFLLKFPHVF-EI 57
+E EK +R +L + L S+ +++P+S + + RV + E F+ FP VF E
Sbjct: 41 VEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPIE---FIRSFPSVFQEF 97
Query: 58 YEHPVQRILYCRLTRKALLQIEQEKKALNAQIPEA--VTRLRKLLMMSNSGCLRLEHVRI 115
+ + LT + L E+ ++ + RL KLLM++ + LE + +
Sbjct: 98 LPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMINRINKIPLEILDL 157
Query: 116 ARTEFGLPEDFEYSVVLKNAQFFRLFNAK-ESTEKYIELVGRDPSLAVCAIEKVREKEYR 174
+ + GLP+D+ ++V + +FR+ +K +ELV AV +EK + + R
Sbjct: 158 LKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVCWSNEHAVSVLEK-KARTLR 216
Query: 175 ERGIDAEDIRFSFLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGYDLRSLEAQKRM 234
+G + +F + F GF + K + + WQ++PY SPYE+ S E+
Sbjct: 217 -KGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYENALHLSATSDES---- 271
Query: 235 EKRAVATIHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTRGNHGKL 294
+K A A +HE++ L V KK+ + I H M L + K L H GIFY+S++ +
Sbjct: 272 DKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIFYLSSKL---RT 328
Query: 295 HTVFLREAYRKGELLEPNDLYLARRKLGELVLMSPRKVKMDTELVRNRRDRHDGGGYMGR 354
HTV LR+ Y++G L+E N+L +R + +L+ VK D + V + + D G G
Sbjct: 329 HTVVLRDGYKRGMLIESNELVTSRNRYMKLM----NTVKKDNKAVSSSSKKEDKGKVEGE 384
Query: 355 --STVVHA-NNGFDNFGVKENAGGDQKGDADLDSDLGSNVESDTSDEN 399
T A N+ V+++ GD D + D ++ N + + N
Sbjct: 385 VCDTDAKAENDDISGSDVEDDRQGDFVDDDEDDDEVDQNQDLERGRRN 432
>TAIR|locus:2166305 [details] [associations]
symbol:emb1692 "embryo defective 1692" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016787
EMBL:AB009051 InterPro:IPR021099 Pfam:PF11955 EMBL:DQ447107
IPI:IPI00537127 RefSeq:NP_201104.1 UniGene:At.55687
EnsemblPlants:AT5G62990.1 GeneID:836419 KEGG:ath:AT5G62990
TAIR:At5g62990 eggNOG:NOG271848 HOGENOM:HOG000115856
InParanoid:Q9FM53 OMA:NLKRRHQ PhylomeDB:Q9FM53
ProtClustDB:CLSN2687529 Genevestigator:Q9FM53 Uniprot:Q9FM53
Length = 494
Score = 303 (111.7 bits), Expect = 8.6e-26, P = 8.6e-26
Identities = 120/418 (28%), Positives = 201/418 (48%)
Query: 4 EKKMRKVLKFQTLFLSQHNQTLPVSRLDFLARRVGFKRQEAG-SFLLKFPHVFEIYEHPV 62
+ ++R V K TL LS+ +P+ L + + A S + ++P +FE++ P
Sbjct: 72 QNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFELFTTPT 131
Query: 63 QRI----------LYCRLTRKALLQIEQEKKALNAQIPEAV-TRLRKLLMMSNSGCLRLE 111
+ L RLT A QE L ++I + + T+L+KLLM+S+ L L
Sbjct: 132 PHLPMNATKPLSQLCVRLTSAASSLAMQELN-LKSEISDKLATKLQKLLMLSSHRRLLLS 190
Query: 112 H-VRIARTEFGLPEDFEYSVVLKNAQFFRLFNAKESTEKYIELVGRDPSLAVCAIEKVRE 170
V IA +FG P +F + F+ + S + +ELV DP LA ++
Sbjct: 191 KLVHIA-PDFGFPPNFRSRLCNDYPDKFKTVDT--SYGRALELVSSDPELA----NQMPS 243
Query: 171 KEYRERGIDAE-DIRFSFLVNFPPGFKIGKYYRIAVWKWQRVPYWSPYEDVSGY-DLRSL 228
E +RG+ + ++F L N G + + ++ + K++ P PY+ S Y S+
Sbjct: 244 PEV-DRGLIVDRPLKFKRL-NLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYLASESI 301
Query: 229 EAQKRMEKRAVATIHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTR 288
EA EKRA A + E+L LTVEK+ ++ + HFR +LP KL++ +++H +FY+S +
Sbjct: 302 EA----EKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSIK 357
Query: 289 GNHGKLHTVFLREAYR-KGELLEPNDLYLARRKLGELVLMSPRKVKMDTELVRNRRDRHD 347
G +VFL EAY G+LL+ ++ + R +L +L+ E R RR+R
Sbjct: 358 GMRD---SVFLVEAYNDNGDLLDKDERLVIRERLIDLI----------QEGKRIRRERRR 404
Query: 348 GGGYMGRSTVVHANNGFDNFGVKENAGGDQKGDA--DL-DS-DLGSNVESDTSDENDD 401
G +G +V + ++ D+ D +L DS DLG D D++D+
Sbjct: 405 KGATLGDKSVEEKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDE 462
>TAIR|locus:2064940 [details] [associations]
symbol:WTF9 "AT2G39120" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000373
"Group II intron splicing" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0017004 "cytochrome complex assembly"
evidence=IMP] GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0017004 GO:GO:0003723 GO:GO:0016787 EMBL:AC005770
GO:GO:0000373 InterPro:IPR021099 Pfam:PF11955 UniGene:At.13254
UniGene:At.66409 IPI:IPI00547936 PIR:D84813 RefSeq:NP_181445.1
PaxDb:Q9ZUZ6 PRIDE:Q9ZUZ6 EnsemblPlants:AT2G39120.1 GeneID:818498
KEGG:ath:AT2G39120 TAIR:At2g39120 eggNOG:NOG247058
HOGENOM:HOG000240474 InParanoid:Q9ZUZ6 OMA:IIRCRRS PhylomeDB:Q9ZUZ6
ProtClustDB:CLSN2683245 ArrayExpress:Q9ZUZ6 Genevestigator:Q9ZUZ6
Uniprot:Q9ZUZ6
Length = 387
Score = 280 (103.6 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 95/335 (28%), Positives = 159/335 (47%)
Query: 6 KMRKVLKFQTLFLSQHNQTLPVSRLDFLARRVGFKRQEAGSFLLKFPHVFEIYEHPVQRI 65
+++ V+ + + + N+ +P+S + R+ + A FL KFP +FE + P +
Sbjct: 48 QLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTKIA-HFLRKFPSIFEEFVGPEYNL 106
Query: 66 LYCRLTRKALLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIARTEFGLPED 125
+ RLT +A QE+ + RL+KL++MS L L V+ + GLP+D
Sbjct: 107 PWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDD 166
Query: 126 FEYSVVLKNAQFFRLFNAKESTEKY-IELVGRDPSLAVCAIEKVREKEYRERGIDAEDIR 184
+ + FR + ++ + ++ G D L+V ++K K+ R + E+I
Sbjct: 167 YLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSV--LQKNAMKKRRGE-VSLEEIE 223
Query: 185 FSFLVNFPP-GFKIGKYYRIAVW--KWQRVPYWSPYEDVSGYDLRSLEAQKRMEKRAVAT 241
F FP G ++ +I W ++Q++PY SPY+D S D S A EKR V
Sbjct: 224 FPL---FPSKGCRLR--VKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA----EKRVVGF 274
Query: 242 IHELLTLTVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYISTRGNHGKLHTVFLRE 301
+HELL L VE +++ + LP+K+ + +H IFY+S + K T LRE
Sbjct: 275 LHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKN---KTCTAILRE 331
Query: 302 AYRKGELLEPNDL------YLARRKLGELVLMSPR 330
YR +E + + Y+ K EL+L S R
Sbjct: 332 PYRDKASVETHPVLGVRKKYIQLMKNSELILKSRR 366
>TAIR|locus:2138738 [details] [associations]
symbol:AT4G08940 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0015824 "proline transport"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006979
UniGene:At.33721 InterPro:IPR021099 Pfam:PF11955 EMBL:BT010540
EMBL:AK175286 IPI:IPI00519569 RefSeq:NP_192633.2 UniGene:At.66591
DNASU:826472 EnsemblPlants:AT4G08940.1 GeneID:826472
KEGG:ath:AT4G08940 TAIR:At4g08940 eggNOG:NOG259084
HOGENOM:HOG000243193 InParanoid:Q6NQB8 OMA:LAGTEMN PhylomeDB:Q6NQB8
ProtClustDB:CLSN2680952 Genevestigator:Q6NQB8 Uniprot:Q6NQB8
Length = 395
Score = 243 (90.6 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 90/306 (29%), Positives = 145/306 (47%)
Query: 17 FLS-QHNQTLPVSRLDFLARRVGFKR-QEAGSFLLKFPHVFEIYEHPVQRILYCRLTRKA 74
F+S Q + L + L R +GF R ++ F+ K P +F+ Y H +I + T
Sbjct: 90 FISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQTYRHSDGKI-WLGFTEFM 148
Query: 75 LLQIEQEKKALNAQIPEAVTRLRKLLMMSNSGCLRLEHVRIARTEFGLPEDFEYSVVLKN 134
+++EK + + + V +RKLLMM+ + L + R FG+PEDF V K
Sbjct: 149 EDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTRLLFGIPEDFRDRVA-KY 207
Query: 135 AQFFRLFNAKESTEKYIELVGRDPSLAVCAIEKVREKEYRERGIDAEDIRFSFLVNFPPG 194
+FR+ + + +ELV D +LAV +E++ ID + + F FP
Sbjct: 208 PDYFRVVTGGDGN-RVLELVNWDTNLAVSELERLFM-------IDEDKAKRVF--KFP-- 255
Query: 195 FKIGKYYRIAVWKWQRV------PYWSPYEDVSGYDLRSLEAQKRMEKRAVATIHELLTL 248
K GK + +++ P SPY D D+ SLEA EK V +HE L L
Sbjct: 256 VKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEA----EKYRVGIVHEFLNL 311
Query: 249 TVEKKITLERIAHFRLAMNLPKKLKEFLLQHQGIFYIS-TRGNHGKLHTVFLREAYRKGE 307
T+EK+ ++ I F+ +L ++ + L + FY++ T N TVFL++AY +
Sbjct: 312 TLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNW----TVFLKDAYDENG 367
Query: 308 LLEPND 313
+L D
Sbjct: 368 VLVSKD 373
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 417 417 0.00082 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 605 (64 KB)
Total size of DFA: 250 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.39u 0.17s 36.56t Elapsed: 00:00:02
Total cpu time: 36.39u 0.17s 36.56t Elapsed: 00:00:02
Start: Tue May 21 04:05:34 2013 End: Tue May 21 04:05:36 2013