Query         044315
Match_columns 437
No_of_seqs    53 out of 55
Neff          3.0 
Searched_HMMs 29240
Date          Mon Mar 25 23:39:55 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044315.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044315hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3mjh_B Early endosome antigen   92.5   0.016 5.5E-07   40.7  -0.8   28  337-364     3-30  (34)
  2 3fz5_A Possible 2-hydroxychrom  59.5     2.5 8.5E-05   36.9   0.7   28  329-356     2-29  (202)
  3 3kzq_A Putative uncharacterize  41.1     8.1 0.00028   33.4   1.0   35  335-372     6-40  (208)
  4 2imf_A HCCA isomerase, 2-hydro  37.3     9.6 0.00033   32.8   0.9   24  335-358     4-27  (203)
  5 3gl5_A Putative DSBA oxidoredu  34.4      10 0.00035   34.3   0.6   21  334-354     5-25  (239)
  6 1r4w_A Glutathione S-transfera  33.9      10 0.00036   33.3   0.5   15  334-348     8-22  (226)
  7 2elu_A Zinc finger protein 406  33.0     8.6 0.00029   27.4  -0.1   26  341-366    11-36  (37)
  8 1paa_A Yeast transcription fac  31.4      15 0.00052   20.9   0.8   25  339-363     2-26  (30)
  9 3rpp_A Glutathione S-transfera  29.9      13 0.00046   33.4   0.5   15  333-347     7-21  (234)
 10 2in3_A Hypothetical protein; D  27.7      15 0.00052   31.3   0.5   22  335-356    11-32  (216)
 11 1uf2_A Core protein P3; virus   27.6      19 0.00066   39.5   1.3   37   43-83    221-262 (1019)
 12 2rem_A Disulfide oxidoreductas  26.3      19 0.00064   30.1   0.8   20  338-357    33-52  (193)
 13 2lvu_A Zinc finger and BTB dom  31.0      15 0.00052   20.5   0.0   22  340-361     3-24  (26)
 14 4dvc_A Thiol:disulfide interch  24.8      18 0.00061   29.6   0.4   10  339-348    30-39  (184)
 15 3c7m_A Thiol:disulfide interch  24.3      20 0.00067   29.8   0.5   23  333-356    21-44  (195)
 16 3cyv_A URO-D, UPD, uroporphyri  23.2      29 0.00099   32.9   1.5   65  162-227   220-302 (354)
 17 3bci_A Disulfide bond protein   22.3      22 0.00075   29.9   0.5   14  336-349    17-30  (186)
 18 2adr_A ADR1; transcription reg  21.3      19 0.00064   24.3  -0.1   26  339-364    30-55  (60)
 19 1r3s_A URO-D, uroporphyrinogen  21.0      31  0.0011   33.0   1.3   65  163-228   231-316 (367)

No 1  
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=92.48  E-value=0.016  Score=40.73  Aligned_cols=28  Identities=36%  Similarity=0.657  Sum_probs=25.9

Q ss_pred             cccCCCchhhhhcccccchhhhhccccc
Q 044315          337 TEDFSCPFCLAKCASFKGLRYHLSSSHD  364 (437)
Q Consensus       337 tedFsCPfCl~~C~sfkGL~~HL~ssHD  364 (437)
                      .|+|.||.|+..+++...|..|-.+-|+
T Consensus         3 ~EGFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            3 SEGFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             SEEEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             CcccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            4789999999999999999999888886


No 2  
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=59.48  E-value=2.5  Score=36.91  Aligned_cols=28  Identities=21%  Similarity=0.301  Sum_probs=19.5

Q ss_pred             ceeeeeeccccCCCchhhhhcccccchh
Q 044315          329 NKLQRTEVTEDFSCPFCLAKCASFKGLR  356 (437)
Q Consensus       329 N~~qkTEvtedFsCPfCl~~C~sfkGL~  356 (437)
                      |.+.+=|+--|+.||||+.-=..+..+.
T Consensus         2 ~~~~~I~~~~D~~cPwcyi~~~~l~~~~   29 (202)
T 3fz5_A            2 NAMNPIEFWFDFSSGYAFFAAQRIEALA   29 (202)
T ss_dssp             -CCSCEEEEECTTCHHHHHHHTTHHHHH
T ss_pred             CCCceeEEEEeCCCHHHHHHHHHHHHHH
Confidence            4556668889999999998544444443


No 3  
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=41.08  E-value=8.1  Score=33.44  Aligned_cols=35  Identities=23%  Similarity=0.492  Sum_probs=22.1

Q ss_pred             eccccCCCchhhhhcccccchhhhhcccccccceeeee
Q 044315          335 EVTEDFSCPFCLAKCASFKGLRYHLSSSHDLFNFEFWV  372 (437)
Q Consensus       335 EvtedFsCPfCl~~C~sfkGL~~HL~ssHDlF~FeF~~  372 (437)
                      ++--|+.||||+.-=..+..|..++.   +-+.++|.+
T Consensus         6 ~~~~D~~CP~cy~~~~~l~~l~~~~~---~~v~v~~~p   40 (208)
T 3kzq_A            6 YYVHDPMCSWCWGYKPTIEKLKQQLP---GVIQFEYVV   40 (208)
T ss_dssp             EEEECTTCHHHHHHHHHHHHHHHHSC---TTSEEEEEE
T ss_pred             EEEECCCCchhhhhhHHHHHHHHhCC---CCceEEEEe
Confidence            46679999999975445555555442   345555544


No 4  
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=37.33  E-value=9.6  Score=32.82  Aligned_cols=24  Identities=21%  Similarity=0.289  Sum_probs=16.8

Q ss_pred             eccccCCCchhhhhcccccchhhh
Q 044315          335 EVTEDFSCPFCLAKCASFKGLRYH  358 (437)
Q Consensus       335 EvtedFsCPfCl~~C~sfkGL~~H  358 (437)
                      ++--||.||||+.--..+..|..+
T Consensus         4 ~~~~D~~CP~cy~~~~~l~~~~~~   27 (203)
T 2imf_A            4 DFYFDFLSPFSYLANQRLSKLAQD   27 (203)
T ss_dssp             EEEECTTCHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCHHHHHHHHHHHHHHHH
Confidence            466799999999855555554444


No 5  
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=34.42  E-value=10  Score=34.34  Aligned_cols=21  Identities=33%  Similarity=0.792  Sum_probs=14.8

Q ss_pred             eeccccCCCchhhhhcccccc
Q 044315          334 TEVTEDFSCPFCLAKCASFKG  354 (437)
Q Consensus       334 TEvtedFsCPfCl~~C~sfkG  354 (437)
                      =|+--|+.||||+.-=..+..
T Consensus         5 I~~~~D~~cPwcyig~~~l~~   25 (239)
T 3gl5_A            5 VEIWSDIACPWCYVGKARFEK   25 (239)
T ss_dssp             EEEEECSSCHHHHHHHHHHHH
T ss_pred             EEEEEeCcCHhHHHHHHHHHH
Confidence            467789999999974333443


No 6  
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=33.90  E-value=10  Score=33.32  Aligned_cols=15  Identities=20%  Similarity=0.264  Sum_probs=12.4

Q ss_pred             eeccccCCCchhhhh
Q 044315          334 TEVTEDFSCPFCLAK  348 (437)
Q Consensus       334 TEvtedFsCPfCl~~  348 (437)
                      =++--||.||||+.-
T Consensus         8 I~~~~D~~CP~Cy~~   22 (226)
T 1r4w_A            8 LELFYDVLSPYSWLG   22 (226)
T ss_dssp             EEEEECTTCHHHHHH
T ss_pred             EEEEEeCCChHHHHH
Confidence            367789999999974


No 7  
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=33.03  E-value=8.6  Score=27.40  Aligned_cols=26  Identities=35%  Similarity=0.640  Sum_probs=23.9

Q ss_pred             CCchhhhhcccccchhhhhccccccc
Q 044315          341 SCPFCLAKCASFKGLRYHLSSSHDLF  366 (437)
Q Consensus       341 sCPfCl~~C~sfkGL~~HL~ssHDlF  366 (437)
                      .|-||--+-..-+.|.+|..-+||.-
T Consensus        11 hcrfckkkysdvknlikhire~hd~~   36 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHDPQ   36 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            59999999999999999999999963


No 8  
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.36  E-value=15  Score=20.91  Aligned_cols=25  Identities=20%  Similarity=0.360  Sum_probs=19.5

Q ss_pred             cCCCchhhhhcccccchhhhhcccc
Q 044315          339 DFSCPFCLAKCASFKGLRYHLSSSH  363 (437)
Q Consensus       339 dFsCPfCl~~C~sfkGL~~HL~ssH  363 (437)
                      .|.|+.|-.....-..|..|+...|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H   26 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIH   26 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTS
T ss_pred             CcCCcccCcccCChHHHHHHHHHHc
Confidence            3789999877777788999965555


No 9  
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=29.86  E-value=13  Score=33.40  Aligned_cols=15  Identities=20%  Similarity=0.313  Sum_probs=12.4

Q ss_pred             eeeccccCCCchhhh
Q 044315          333 RTEVTEDFSCPFCLA  347 (437)
Q Consensus       333 kTEvtedFsCPfCl~  347 (437)
                      +=|+--|+.||||+.
T Consensus         7 ~I~~~~D~~CPwcyi   21 (234)
T 3rpp_A            7 TVELFYDVLSPYSWL   21 (234)
T ss_dssp             EEEEEECTTCHHHHH
T ss_pred             eEEEEEeCCCHHHHH
Confidence            346778999999997


No 10 
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=27.72  E-value=15  Score=31.33  Aligned_cols=22  Identities=18%  Similarity=0.409  Sum_probs=14.2

Q ss_pred             eccccCCCchhhhhcccccchh
Q 044315          335 EVTEDFSCPFCLAKCASFKGLR  356 (437)
Q Consensus       335 EvtedFsCPfCl~~C~sfkGL~  356 (437)
                      ++-.|+.||||+..-.-+..|.
T Consensus        11 ~~f~D~~CP~C~~~~~~~~~l~   32 (216)
T 2in3_A           11 WYIADPMCSWCWGFAPVIENIR   32 (216)
T ss_dssp             EEEECTTCHHHHHHHHHHHHHH
T ss_pred             EEEECCCCchhhcchHHHHHHH
Confidence            4667999999995333334433


No 11 
>1uf2_A Core protein P3; virus components, icosahedral virus; 3.50A {Rice dwarf virus} SCOP: e.28.1.2
Probab=27.61  E-value=19  Score=39.52  Aligned_cols=37  Identities=43%  Similarity=0.731  Sum_probs=28.0

Q ss_pred             ccCCCHHHH----hhhhcccc-cccchhhHHHHHHHhhhcCChhhh
Q 044315           43 RVHLSAEEE----IAAEESLS-IYCKPVELYNILQRRAIRNPSFLQ   83 (437)
Q Consensus        43 ~~~Ls~eE~----lAAeeSLs-lYCKPVELYNiiqrRa~~nP~FLQ   83 (437)
                      ++.+.+.|-    + |-+=|. -||.|.-.||-||+||   |.||-
T Consensus       221 ~VPfh~iELaLy~l-A~~lL~~QYCHPtvvy~yL~~RA---PpFL~  262 (1019)
T 1uf2_A          221 SVPYHQIELALHAL-ANDLLSIQYCHPTVVYNYLSSRA---PNFLR  262 (1019)
T ss_dssp             EESSCHHHHHHHHH-HHHHHHHHEECHHHHHHHHHHTC---CTTEE
T ss_pred             eccccHHHHHHHHH-HHHHHhhhccchHHHHHHHHhcC---CCeEE
Confidence            366777762    3 344444 4999999999999999   99984


No 12 
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=26.27  E-value=19  Score=30.09  Aligned_cols=20  Identities=15%  Similarity=0.436  Sum_probs=13.2

Q ss_pred             ccCCCchhhhhcccccchhh
Q 044315          338 EDFSCPFCLAKCASFKGLRY  357 (437)
Q Consensus       338 edFsCPfCl~~C~sfkGL~~  357 (437)
                      .|+.||||...=..+..|..
T Consensus        33 ~d~~Cp~C~~~~~~l~~l~~   52 (193)
T 2rem_A           33 FGYTCPHCAHFDSKLQAWGA   52 (193)
T ss_dssp             ECTTCHHHHHHHHHHHHHHH
T ss_pred             ECCCChhHhhhhHHHHHHHH
Confidence            38999999875444444433


No 13 
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=30.97  E-value=15  Score=20.54  Aligned_cols=22  Identities=18%  Similarity=0.418  Sum_probs=17.5

Q ss_pred             CCCchhhhhcccccchhhhhcc
Q 044315          340 FSCPFCLAKCASFKGLRYHLSS  361 (437)
Q Consensus       340 FsCPfCl~~C~sfkGL~~HL~s  361 (437)
                      |.|+.|-..-..-..|..|+..
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            6799998777777888888754


No 14 
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=24.82  E-value=18  Score=29.58  Aligned_cols=10  Identities=40%  Similarity=1.012  Sum_probs=8.4

Q ss_pred             cCCCchhhhh
Q 044315          339 DFSCPFCLAK  348 (437)
Q Consensus       339 dFsCPfCl~~  348 (437)
                      ||.||+|...
T Consensus        30 dy~Cp~C~~~   39 (184)
T 4dvc_A           30 SFYCPHCNTF   39 (184)
T ss_dssp             CTTCHHHHHH
T ss_pred             CCCCHhHHHH
Confidence            8999999753


No 15 
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=24.30  E-value=20  Score=29.84  Aligned_cols=23  Identities=22%  Similarity=0.550  Sum_probs=14.5

Q ss_pred             eeeccccCCCchhhhhcccc-cchh
Q 044315          333 RTEVTEDFSCPFCLAKCASF-KGLR  356 (437)
Q Consensus       333 kTEvtedFsCPfCl~~C~sf-kGL~  356 (437)
                      ..|+. ||.||||...=..+ ..|.
T Consensus        21 ~ief~-d~~CP~C~~~~~~l~~~l~   44 (195)
T 3c7m_A           21 LIKVF-SYACPFCYKYDKAVTGPVS   44 (195)
T ss_dssp             EEEEE-CTTCHHHHHHHHHTHHHHH
T ss_pred             EEEEE-eCcCcchhhCcHHHHHHHH
Confidence            34664 59999999744444 4443


No 16 
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=23.22  E-value=29  Score=32.86  Aligned_cols=65  Identities=17%  Similarity=0.172  Sum_probs=38.4

Q ss_pred             eeeecchhhhhhhhhccc----ceEEEEeeccCCCCCC-----CCC---Ccc-hhhcc----cCCCc-eeecccchhhhh
Q 044315          162 ANFVLPEISRLQLKAKSC----TLAILLVNFAGSPNSS-----SGT---DLT-KARLA----NDGGY-CHWGKIPLESLY  223 (437)
Q Consensus       162 A~FilPel~kL~~~ak~g----~L~Illvs~~~~~~s~-----~~~---~~s-~~h~~----~~~G~-C~WGKip~~sL~  223 (437)
                      -.|++|-++++...++..    ...||++ |++.+.-.     .+.   +.. ...++    .+|++ |+||.++-..|.
T Consensus       220 ~ef~~p~~k~i~~~i~~~~~~~~~~ii~~-~~g~~~~l~~l~~~g~d~i~~d~~~dl~~~~~~~g~~~~l~Gn~dp~~l~  298 (354)
T 3cyv_A          220 QQFSLYYMHKIVDGLLRENDGRRVPVTLF-TKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY  298 (354)
T ss_dssp             HHHTHHHHHHHHHHSCSEETTEECCEEEE-CTTTTTTHHHHHTTSCSEEECCTTSCHHHHHHHHTTTSEEECCBCGGGGG
T ss_pred             HHHhHHHHHHHHHHHHHhcCCCCCCEEEE-CCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHhCCCeEEEecCChHHhC
Confidence            368999999999988753    3556665 44433111     000   110 01111    46754 999999987776


Q ss_pred             hccc
Q 044315          224 RSWE  227 (437)
Q Consensus       224 ssWe  227 (437)
                      .++|
T Consensus       299 ~t~e  302 (354)
T 3cyv_A          299 APPA  302 (354)
T ss_dssp             SCHH
T ss_pred             CCHH
Confidence            5555


No 17 
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=22.33  E-value=22  Score=29.86  Aligned_cols=14  Identities=36%  Similarity=0.925  Sum_probs=10.5

Q ss_pred             ccccCCCchhhhhc
Q 044315          336 VTEDFSCPFCLAKC  349 (437)
Q Consensus       336 vtedFsCPfCl~~C  349 (437)
                      +-.||.||||...=
T Consensus        17 ~f~D~~Cp~C~~~~   30 (186)
T 3bci_A           17 VYGDYKCPYCKELD   30 (186)
T ss_dssp             EEECTTCHHHHHHH
T ss_pred             EEECCCChhHHHHH
Confidence            34599999998643


No 18 
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=21.31  E-value=19  Score=24.30  Aligned_cols=26  Identities=19%  Similarity=0.338  Sum_probs=22.3

Q ss_pred             cCCCchhhhhcccccchhhhhccccc
Q 044315          339 DFSCPFCLAKCASFKGLRYHLSSSHD  364 (437)
Q Consensus       339 dFsCPfCl~~C~sfkGL~~HL~ssHD  364 (437)
                      .|.|+.|.....+-..|..|+...|.
T Consensus        30 ~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A           30 PYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcC
Confidence            58899999888888899999877774


No 19 
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=20.97  E-value=31  Score=33.01  Aligned_cols=65  Identities=23%  Similarity=0.269  Sum_probs=39.2

Q ss_pred             eeecchhhhhhhhhc-c----c--ceEEEEeeccCC---------CCCCCCCCcchhhcc----cCCCc-eeecccchhh
Q 044315          163 NFVLPEISRLQLKAK-S----C--TLAILLVNFAGS---------PNSSSGTDLTKARLA----NDGGY-CHWGKIPLES  221 (437)
Q Consensus       163 ~FilPel~kL~~~ak-~----g--~L~Illvs~~~~---------~~s~~~~~~s~~h~~----~~~G~-C~WGKip~~s  221 (437)
                      .|++|-++++...++ .    |  ...+|+..||..         |-...+.|-. ..++    .+|++ |+||.++-..
T Consensus       231 ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~~~~l~~l~~~g~d~i~~d~~-~dl~~a~~~~g~~~~l~Gnldp~~  309 (367)
T 1r3s_A          231 KFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWT-VAPKKARECVGKTVTLQGNLDPCA  309 (367)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTT-SCHHHHHHHHCSSSEEEEEECGGG
T ss_pred             HHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCcHHHHHHHHhcCCCEEEeCCC-CCHHHHHHHcCCCeEEEeCCChHH
Confidence            589999999998887 3    3  455666677651         1111111110 1111    46764 9999999877


Q ss_pred             hhhcccc
Q 044315          222 LYRSWEK  228 (437)
Q Consensus       222 L~ssWek  228 (437)
                      |..++|.
T Consensus       310 L~gt~e~  316 (367)
T 1r3s_A          310 LYASEEE  316 (367)
T ss_dssp             GGSCHHH
T ss_pred             hcCCHHH
Confidence            7666653


Done!