Query 044315
Match_columns 437
No_of_seqs 53 out of 55
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 23:40:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044315.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044315hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ctda2 g.37.1.1 (A:61-90) Zin 54.9 1.3 9.3E-05 28.8 0.1 27 338-364 1-27 (30)
2 d1nepa_ b.1.18.7 (A:) Epididym 32.1 33 0.0024 26.6 5.3 36 355-390 78-114 (130)
3 d1r4wa_ c.47.1.13 (A:) Mitocho 30.0 6.3 0.00046 31.3 0.5 14 334-347 7-20 (221)
4 d2ct1a2 g.37.1.1 (A:8-43) Tran 26.9 4.5 0.00033 26.4 -0.7 26 339-364 8-33 (36)
5 d1klra_ g.37.1.1 (A:) ZFY {Hum 25.0 7.8 0.00057 25.0 0.2 25 340-364 3-27 (30)
6 d1uf2a_ e.28.1.2 (A:) RDV p3 { 24.2 11 0.00083 38.6 1.3 37 43-83 172-213 (967)
7 d1bboa1 g.37.1.1 (A:1-28) Enha 24.1 9.1 0.00066 24.5 0.4 25 340-364 2-26 (28)
8 d1fvka_ c.47.1.13 (A:) Disulfi 21.0 21 0.0015 27.7 2.1 12 335-347 24-35 (188)
9 d2c2la2 g.44.1.2 (A:225-304) S 20.9 13 0.00091 26.7 0.6 15 333-347 1-15 (80)
10 d1p7hl1 b.1.18.1 (L:576-678) T 19.8 35 0.0025 26.2 3.2 43 257-301 58-100 (103)
No 1
>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.86 E-value=1.3 Score=28.84 Aligned_cols=27 Identities=33% Similarity=0.812 Sum_probs=24.3
Q ss_pred ccCCCchhhhhcccccchhhhhccccc
Q 044315 338 EDFSCPFCLAKCASFKGLRYHLSSSHD 364 (437)
Q Consensus 338 edFsCPfCl~~C~sfkGL~~HL~ssHD 364 (437)
|-|+|+-|--+=-|..|..+|+.+-|.
T Consensus 1 e~ftc~hcgkqlks~~gmkyhvmadhn 27 (30)
T d2ctda2 1 EMFTCHHCGKQLRSLAGMKYHVMANHN 27 (30)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CceechhHHHHHhhccCceEEEeeccc
Confidence 569999999988999999999998875
No 2
>d1nepa_ b.1.18.7 (A:) Epididymal secretory protein E1 (Niemann-Pick C2 protein) {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.07 E-value=33 Score=26.65 Aligned_cols=36 Identities=17% Similarity=0.292 Sum_probs=26.3
Q ss_pred hhhhhccccc-ccceeeeecCCcceEEEEEeeeceec
Q 044315 355 LRYHLSSSHD-LFNFEFWVTEEYQAVNVSVKTDIWRS 390 (437)
Q Consensus 355 L~~HL~ssHD-lF~FeF~~~ed~~~VnVsvk~d~~~~ 390 (437)
+.|=|..--+ .++++|-+...+|.+++.|+-.+|..
T Consensus 78 ~~CPl~~G~~~~y~~~~~I~~~~P~~~~~v~~~l~d~ 114 (130)
T d1nepa_ 78 IRCPIEKDKTYNYVNKLPVKNEYPSIKVVVEWELTDD 114 (130)
T ss_dssp CCSSBCTTCEEEEEEEEECCTTSCSSEEEEEEEEECT
T ss_pred CcCCccCCceEEEEEEEEcchhhccEEEEEEEEEEcC
Confidence 3344444322 57888888899999999999988863
No 3
>d1r4wa_ c.47.1.13 (A:) Mitochondrial class kappa glutathione S-transferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=29.98 E-value=6.3 Score=31.28 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=11.9
Q ss_pred eeccccCCCchhhh
Q 044315 334 TEVTEDFSCPFCLA 347 (437)
Q Consensus 334 TEvtedFsCPfCl~ 347 (437)
=|+--||.||||++
T Consensus 7 I~~y~D~~sP~~Yl 20 (221)
T d1r4wa_ 7 LELFYDVLSPYSWL 20 (221)
T ss_dssp EEEEECTTCHHHHH
T ss_pred EEEEEeCCCHHHHH
Confidence 46677999999997
No 4
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.89 E-value=4.5 Score=26.39 Aligned_cols=26 Identities=19% Similarity=0.539 Sum_probs=22.4
Q ss_pred cCCCchhhhhcccccchhhhhccccc
Q 044315 339 DFSCPFCLAKCASFKGLRYHLSSSHD 364 (437)
Q Consensus 339 dFsCPfCl~~C~sfkGL~~HL~ssHD 364 (437)
-|.|++|......=..|+.|+...|.
T Consensus 8 P~~C~~C~k~F~~~~~L~~H~~~~H~ 33 (36)
T d2ct1a2 8 PYECYICHARFTQSGTMKMHILQKHT 33 (36)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred CEeCCCCcccccchHHHHHHcccccC
Confidence 47899999988888999999887763
No 5
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.96 E-value=7.8 Score=25.05 Aligned_cols=25 Identities=24% Similarity=0.711 Sum_probs=23.0
Q ss_pred CCCchhhhhcccccchhhhhccccc
Q 044315 340 FSCPFCLAKCASFKGLRYHLSSSHD 364 (437)
Q Consensus 340 FsCPfCl~~C~sfkGL~~HL~ssHD 364 (437)
+.|++|-.+|+.=..|..|.++-|.
T Consensus 3 y~cqyc~yrsadssnlkthiktkhs 27 (30)
T d1klra_ 3 YQCQYCEFRSADSSNLKTHIKTKHS 27 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred ccccccccccccchhhhhhhhcccc
Confidence 5799999999999999999998875
No 6
>d1uf2a_ e.28.1.2 (A:) RDV p3 {Rice dwarf virus [TaxId: 10991]}
Probab=24.18 E-value=11 Score=38.60 Aligned_cols=37 Identities=43% Similarity=0.731 Sum_probs=28.0
Q ss_pred ccCCCHHHH----hhhhcccc-cccchhhHHHHHHHhhhcCChhhh
Q 044315 43 RVHLSAEEE----IAAEESLS-IYCKPVELYNILQRRAIRNPSFLQ 83 (437)
Q Consensus 43 ~~~Ls~eE~----lAAeeSLs-lYCKPVELYNiiqrRa~~nP~FLQ 83 (437)
++.+.+.|- + |-+=|. -||.|.-.||-+|+|| |.||-
T Consensus 172 ~VPfh~iELaLy~l-A~~lL~~QYCHPtvvy~yl~~RA---PpFL~ 213 (967)
T d1uf2a_ 172 SVPYHQIELALHAL-ANDLLSIQYCHPTVVYNYLSSRA---PNFLR 213 (967)
T ss_dssp EESSCHHHHHHHHH-HHHHHHHHEECHHHHHHHHHHTC---CTTEE
T ss_pred eccccHHHHHHHHH-HHHHHhhhccchHHHHHHHHhcC---CCeEE
Confidence 366777762 3 344444 4999999999999999 99984
No 7
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.06 E-value=9.1 Score=24.51 Aligned_cols=25 Identities=20% Similarity=0.418 Sum_probs=21.4
Q ss_pred CCCchhhhhcccccchhhhhccccc
Q 044315 340 FSCPFCLAKCASFKGLRYHLSSSHD 364 (437)
Q Consensus 340 FsCPfCl~~C~sfkGL~~HL~ssHD 364 (437)
+.||.|...|+.=.-|++|..+-.|
T Consensus 2 YvC~~Cg~~C~KPSvL~KHIRsHT~ 26 (28)
T d1bboa1 2 YICEECGIRAKKPSMLKKHIRTHTD 26 (28)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred ccccccCcccCCHHHHHHHHHHhcC
Confidence 5799999999999999999876433
No 8
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA) {Escherichia coli [TaxId: 562]}
Probab=21.02 E-value=21 Score=27.67 Aligned_cols=12 Identities=42% Similarity=1.013 Sum_probs=9.5
Q ss_pred eccccCCCchhhh
Q 044315 335 EVTEDFSCPFCLA 347 (437)
Q Consensus 335 EvtedFsCPfCl~ 347 (437)
|+. ||.||+|..
T Consensus 24 Eff-dy~Cp~C~~ 35 (188)
T d1fvka_ 24 EFF-SFFCPHCYQ 35 (188)
T ss_dssp EEE-CTTCHHHHH
T ss_pred EEE-CCCChhhHH
Confidence 444 899999985
No 9
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.87 E-value=13 Score=26.74 Aligned_cols=15 Identities=0% Similarity=0.244 Sum_probs=12.9
Q ss_pred eeeccccCCCchhhh
Q 044315 333 RTEVTEDFSCPFCLA 347 (437)
Q Consensus 333 kTEvtedFsCPfCl~ 347 (437)
|.|+-++|.||-|+.
T Consensus 1 k~eiP~~l~CpIc~~ 15 (80)
T d2c2la2 1 KRDIPDYLCGKISFE 15 (80)
T ss_dssp CCCCCSTTBCTTTCS
T ss_pred CCCCCccccCcCcCc
Confidence 568999999999974
No 10
>d1p7hl1 b.1.18.1 (L:576-678) T-cell transcription factor NFAT1 (NFATC2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.81 E-value=35 Score=26.20 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=22.7
Q ss_pred CCCceeeeeccCCCCCCCcceeeEEEEeeeeccCCCCCCCCCCcc
Q 044315 257 DKDKCVSIQMPFNSGSSSTSQQVHVTISAEEIGGRDKSPYNSFTC 301 (437)
Q Consensus 257 ~~dsclsf~~p~~~~s~~~~~qlQV~isAqE~Ga~ekSPY~sysy 301 (437)
.+..+|.|.+|.-.+. .-...|+|.+.-.- +....|.-..|+|
T Consensus 58 ~~q~aIv~~tPpy~~~-~i~~pV~V~v~l~~-s~~~~S~~~~FtY 100 (103)
T d1p7hl1 58 SQPNMLFVEIPEYRNK-HIRTPVKVNFYVIN-GKRKRSQPQHFTY 100 (103)
T ss_dssp CBTTEEEEECCCCSCT-TCSSCEEEEEEEEE-TTTEECCCEEEEE
T ss_pred eeeeEEEEECCCCCCC-CCcccEEEEEEEEc-CCCcccCCCCEEE
Confidence 3578999999854222 33444555554443 4444453333444
Done!