BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044317
(123 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224083739|ref|XP_002307106.1| predicted protein [Populus trichocarpa]
gi|222856555|gb|EEE94102.1| predicted protein [Populus trichocarpa]
Length = 114
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 84/120 (70%), Gaps = 9/120 (7%)
Query: 1 MAARGGGKAAMAAMKGAGGLKLQAAASS-SKAQAKAKAKGKTKSVAPSSTSELGRFLNIP 59
MAA GGKA+ + K +K A AS S A+ KAK + PSS LG+FL I
Sbjct: 1 MAA-AGGKASRSLKKAV--VKHPAYASWGSVVNAQVKAK-----LTPSSKCNLGKFLGIR 52
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
+PP S+ ++LIT+FIKLNNR+NPGMKKD+L EEKL+++L GK+R+G+ EIAKLL+ QF K
Sbjct: 53 DPPASDISQLITRFIKLNNRQNPGMKKDVLSEEKLRTMLEGKERVGVSEIAKLLAQQFPK 112
>gi|357484393|ref|XP_003612484.1| hypothetical protein MTR_5g025520 [Medicago truncatula]
gi|355513819|gb|AES95442.1| hypothetical protein MTR_5g025520 [Medicago truncatula]
Length = 133
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 14 MKGAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKF 73
M AG ++ ++ SKA A+ GKTK+ +TSEL F+ IP RSE A +I+KF
Sbjct: 1 MNPAGLTGRRSMSTVSKAVAEIMGVGKTKT--RKATSELCTFMGIPHKSRSEIASIISKF 58
Query: 74 IKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
IKL + +PG+KKD L E+ L++LL G++ +G PEIAK+LS +F
Sbjct: 59 IKLYSFRSPGIKKDKLWEQNLQTLLRGRNSVGFPEIAKILSPEF 102
>gi|388504196|gb|AFK40164.1| unknown [Lotus japonicus]
Length = 139
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 22 LQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNREN 81
++ ++ SKA A+ GKTK+ SS EL FL IP RSE + +I+ FIKL N +
Sbjct: 14 CRSMSTVSKAVAEIAGVGKTKTRKASS--ELCTFLGIPHHSRSEISLIISNFIKLYNARS 71
Query: 82 PGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PG+KKD + E+ L++LL G+ +G PEIAK+LS +F
Sbjct: 72 PGIKKDKIWEQNLQTLLRGRSSVGFPEIAKILSTEF 107
>gi|356538435|ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V P S SELG FL P+ R++ K + +IKL N +NP KK++ +EKLK++ GKD+
Sbjct: 56 VVPVS-SELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDK 114
Query: 104 IGIPEIAKLLSGQFVKTG 121
+G EIAKLLS FVK+G
Sbjct: 115 VGFTEIAKLLSSHFVKSG 132
>gi|356496496|ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V P S SELG FL P+ R+E K + +IKL N +NP KK++ +EKLK++ GKD+
Sbjct: 56 VVPVS-SELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDK 114
Query: 104 IGIPEIAKLLSGQFVKT 120
+G EIAKLLS FVK+
Sbjct: 115 VGFTEIAKLLSNHFVKS 131
>gi|357484389|ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355513817|gb|AES95440.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388497934|gb|AFK37033.1| unknown [Medicago truncatula]
Length = 134
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPE 108
TSELG F+ PE R+E K + ++IKL N +NP KK++ ++KLK++ GKD++ E
Sbjct: 62 TSELGNFIGAPEVSRTEAVKKVWEYIKLQNLQNPNNKKEIFCDDKLKTIFDGKDKVVFTE 121
Query: 109 IAKLLSGQFVKT 120
IAKLL+ FVK+
Sbjct: 122 IAKLLATHFVKS 133
>gi|351726850|ref|NP_001238420.1| uncharacterized protein LOC100306154 [Glycine max]
gi|255627701|gb|ACU14195.1| unknown [Glycine max]
Length = 133
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 18 GGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLN 77
G ++ ++ +KA + G TK S+SEL FL IP RSE A +++KF KL
Sbjct: 2 GSFGRRSMSTVAKAVEEITGTGNTK--IRKSSSELCTFLGIPRQSRSEIALILSKFTKLY 59
Query: 78 NRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
N ++PG+KKD + E+ L++LL G++ +G PEIAK+LS +F
Sbjct: 60 NFKSPGIKKDKIWEQNLQTLLRGRNNVGFPEIAKILSPEF 99
>gi|225436221|ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|147798865|emb|CAN68050.1| hypothetical protein VITISV_015104 [Vitis vinifera]
gi|296090194|emb|CBI40013.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 25 AASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGM 84
A + A+ ++ G TK V S L +FL +PE R+E K I + IKLNN +NP
Sbjct: 34 APPRTAAKGPPRSGGITKPVPVSPA--LRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTN 91
Query: 85 KKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
K+++L +EKLKS+ GKD++G EI KLLS F+KT
Sbjct: 92 KREILCDEKLKSVFEGKDKVGFLEIGKLLSHHFIKT 127
>gi|255554525|ref|XP_002518301.1| conserved hypothetical protein [Ricinus communis]
gi|223542521|gb|EEF44061.1| conserved hypothetical protein [Ricinus communis]
Length = 149
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
K+K V PS++S + +FL I EPP S+T+KLI FIKL+NR+NP +KD + L +LLS
Sbjct: 75 KSKEV-PSTSSHICKFLGIVEPPGSDTSKLIANFIKLHNRQNPAKRKDRYFLDNLITLLS 133
Query: 100 GKDRIGIPEIAKLLSG 115
+ +IGI EIAKLLS
Sbjct: 134 KEQKIGIGEIAKLLSN 149
>gi|225427597|ref|XP_002270707.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|296085458|emb|CBI29190.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 39 GKTKSVAPSSTSELGRFLN-IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSL 97
G TK V S +LG+FL +P+ RS K + + IKL+N +NP KK++ +EKLK++
Sbjct: 34 GITKPVPVSP--QLGKFLGGVPQASRSLAIKKVWEHIKLHNLQNPTNKKEICCDEKLKTI 91
Query: 98 LSGKDRIGIPEIAKLLSGQFVKTG 121
GKD++G EIAKLLS FVK G
Sbjct: 92 FDGKDKVGFLEIAKLLSPHFVKIG 115
>gi|18403898|ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13877943|gb|AAK44049.1|AF370234_1 unknown protein [Arabidopsis thaliana]
gi|16323472|gb|AAL15230.1| unknown protein [Arabidopsis thaliana]
gi|20197355|gb|AAM15040.1| Expressed protein [Arabidopsis thaliana]
gi|20197527|gb|AAM15113.1| Expressed protein [Arabidopsis thaliana]
gi|21618090|gb|AAM67140.1| unknown [Arabidopsis thaliana]
gi|26451839|dbj|BAC43012.1| unknown protein [Arabidopsis thaliana]
gi|330254033|gb|AEC09127.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 109
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 11 MAAMKGAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLI 70
M+ + GA + + AASS+ A+ + G K V P S L F+ E R+ K I
Sbjct: 1 MSRVFGACRVLMAKAASSTGAKTGRQGTGILK-VVPVS-KPLANFIGENEVSRTTAVKKI 58
Query: 71 TKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
++IKLNN +NP K+++L +E+LK++ SGKD +G EI+KLLS F K+
Sbjct: 59 WEYIKLNNLQNPVNKREILCDEQLKTIFSGKDTVGFLEISKLLSQHFPKS 108
>gi|255565970|ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis]
gi|223536700|gb|EEF38341.1| brg-1 associated factor, putative [Ricinus communis]
Length = 134
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V+P+ + LG +PE R++ K I IKL+N +NP KK++ +EKLK++ GK++
Sbjct: 60 VSPALSEFLG---GVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDEKLKTIFDGKEK 116
Query: 104 IGIPEIAKLLSGQFVKTG 121
+G EI KLLS FVK+G
Sbjct: 117 VGFLEIGKLLSRHFVKSG 134
>gi|224123994|ref|XP_002319215.1| predicted protein [Populus trichocarpa]
gi|222857591|gb|EEE95138.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 26 ASSSKAQAKAKAKGKTKS-------VAPSSTSE-LGRFLN-IPEPPRSETAKLITKFIKL 76
A++SK K KAK + + + P+ S LG FL +PE R+E K I IKL
Sbjct: 22 ATASKTTPKPKAKATSTTPGTPRGILKPNPVSPVLGDFLGGVPESSRAEAVKKIWAHIKL 81
Query: 77 NNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKTG 121
+N +NP KK+++ + KLK++ G+D++G +I KLLS F K G
Sbjct: 82 HNLQNPTNKKEIICDAKLKAIFDGRDKVGFLDIGKLLSAHFPKAG 126
>gi|147843362|emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
Length = 145
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
K + ++P E+ FL +PE PR++ K I +IK +N ++P KK ++ +EKLKS+ +
Sbjct: 70 KPRRISP----EMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFA 125
Query: 100 GKDRIGIPEIAKLLSGQFVK 119
GKDR+G EIA L++ F+K
Sbjct: 126 GKDRVGFLEIAGLINPHFLK 145
>gi|225429337|ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
Length = 145
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
K + ++P E+ FL +PE PR++ K I +IK +N ++P KK ++ +EKLKS+ +
Sbjct: 70 KPRRISP----EMQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFA 125
Query: 100 GKDRIGIPEIAKLLSGQFVK 119
GKDR+G EIA L++ F+K
Sbjct: 126 GKDRVGFLEIAGLINPHFLK 145
>gi|294463650|gb|ADE77352.1| unknown [Picea sitchensis]
Length = 129
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 24 AAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPG 83
AAA S+ AK K S++P + +FL + E RSE K I + IK NN +NP
Sbjct: 36 AAAESTTKVAKHSGLFKPLSISPV----MKKFLGVSEVARSEAIKKIWEHIKANNLQNPA 91
Query: 84 MKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
K ++L +EKLK++L K+ + + EIAKL+S F+K
Sbjct: 92 NKTEILCDEKLKAILGQKENVNMFEIAKLISPHFIK 127
>gi|449523960|ref|XP_004168991.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
KT+ V+P+ L FL E R+E K I +IKLNN +NP K+ ++ + KLK++
Sbjct: 69 KTQKVSPT----LAGFLGQSEIARTEAVKQIWAYIKLNNLQNPTDKRQIICDAKLKAIFG 124
Query: 100 GKDRIGIPEIAKLLSGQFVKTG 121
G++++G+ EI K LS FVK+G
Sbjct: 125 GREKVGMLEIPKFLSIHFVKSG 146
>gi|115444003|ref|NP_001045781.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|41052552|dbj|BAD07734.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|41053059|dbj|BAD07989.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|113535312|dbj|BAF07695.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|125580680|gb|EAZ21611.1| hypothetical protein OsJ_05241 [Oryza sativa Japonica Group]
gi|215741232|dbj|BAG97727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 131
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 35 AKAKGKTKSVAPSSTSE-LGRFLN-IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEE 92
A+AK K + P S+ L RF PE R+ KLI IK N +NP K+++ ++
Sbjct: 43 AQAKEKRGIMQPVPVSDALSRFAGGAPEMSRAGAVKLIWNHIKANGLQNPANKREINCDD 102
Query: 93 KLKSLLSGKDRIGIPEIAKLLSGQFVK 119
KLKSL +GKD++G+ EIAKLLS F+K
Sbjct: 103 KLKSLFAGKDKVGMMEIAKLLSPHFIK 129
>gi|326507382|dbj|BAK03084.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326515542|dbj|BAK07017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L F+ E PR+E K I +IK NN ++P KK ++ +EKLK+L +G++R+G E+AK
Sbjct: 69 LQAFMGAAEVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVGFLEVAK 128
Query: 112 LLSGQFVKT 120
LLS FVK
Sbjct: 129 LLSPHFVKV 137
>gi|449454542|ref|XP_004145013.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
gi|449473955|ref|XP_004154030.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
KT+ V+P+ L FL E R+E K I +IKLNN +NP K+ ++ + KLK++
Sbjct: 69 KTQKVSPT----LAGFLGQSEIARTEAVKQIWVYIKLNNLQNPTDKRQIICDAKLKAIFG 124
Query: 100 GKDRIGIPEIAKLLSGQFVKTG 121
G++++G+ EI K LS FVK+G
Sbjct: 125 GREKVGMLEIPKFLSIHFVKSG 146
>gi|125537942|gb|EAY84337.1| hypothetical protein OsI_05714 [Oryza sativa Indica Group]
Length = 131
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 35 AKAKGKTKSVAPSSTSE-LGRFLN-IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEE 92
A AK K + P S+ L RF + PE R+ KLI IK N +NP K+++ ++
Sbjct: 43 ALAKEKRGIMQPVPVSDALSRFADGAPEMSRAGAVKLIWNHIKANGLQNPANKREINCDD 102
Query: 93 KLKSLLSGKDRIGIPEIAKLLSGQFVK 119
KLKSL +GKD++G+ EIAKLLS F+K
Sbjct: 103 KLKSLFAGKDKVGMMEIAKLLSPHFIK 129
>gi|296083088|emb|CBI22492.3| unnamed protein product [Vitis vinifera]
Length = 68
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 55 FLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLS 114
FL +PE PR++ K I +IK +N ++P KK ++ +EKLKS+ +GKDR+G EIA L++
Sbjct: 4 FLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAGLIN 63
Query: 115 GQFVK 119
F+K
Sbjct: 64 PHFLK 68
>gi|357146513|ref|XP_003574019.1| PREDICTED: protein TRI1-like [Brachypodium distachyon]
Length = 135
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 59 PEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
PE R+ K++ IK NN +NP +K++ +EKLKS+ SG+D++G+ EI++LLS F+
Sbjct: 73 PEISRANAIKIVWAHIKANNLQNPANRKEINCDEKLKSIFSGRDKVGMMEISRLLSPHFM 132
Query: 119 KTG 121
KT
Sbjct: 133 KTN 135
>gi|297823353|ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325398|gb|EFH55818.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V P S L F+ E R+ K I ++IKLNN +NP K+++L +E+LK++ SGKD
Sbjct: 36 VVPVS-KPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQLKTIFSGKDT 94
Query: 104 IGIPEIAKLLSGQFVKT 120
+G EI+KLLS F K+
Sbjct: 95 VGFLEISKLLSQHFPKS 111
>gi|326511287|dbj|BAJ87657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 157
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L F+ E PR+E K I +IK NN ++P KK ++ +EKLK+L +G++R+G E+AK
Sbjct: 88 LQAFMGAAEVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVGFLEVAK 147
Query: 112 LLSGQFVKT 120
LLS FVK
Sbjct: 148 LLSPHFVKV 156
>gi|168027533|ref|XP_001766284.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682498|gb|EDQ68916.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 107
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 28 SSKAQAKAKAKGK-TKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKK 86
SS A+A K G T+++ S T L +FL + E R E+ K I +IK +NP K+
Sbjct: 4 SSGAKAATKVGGALTRAIQVSPT--LKKFLGVGECSRPESMKRIWDYIKDQKLQNPQNKR 61
Query: 87 DLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
++L +EKLK +L GKD++G EIAKLLS F K
Sbjct: 62 EILCDEKLKPVLGGKDKVGFTEIAKLLSEHFPK 94
>gi|413932997|gb|AFW67548.1| SWIb domain-containing protein [Zea mays]
Length = 145
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Query: 31 AQAKAKAKGKT--KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDL 88
A K +A G T KSV+P+ + +G P PR+E K + +IK +N ++P KK +
Sbjct: 59 APKKKRATGITQPKSVSPALQAIVGD----PVIPRTEVLKRLWAYIKEHNLQDPSDKKVV 114
Query: 89 LGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
+ +EKLK L +G++R+G EIAKLL+ FVK
Sbjct: 115 VCDEKLKVLFAGRERVGFLEIAKLLNPHFVK 145
>gi|297802548|ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
gi|297314994|gb|EFH45417.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 24 AAASSSKAQAKAKAKGKTKSVAPSSTS-ELGRFLNIPEPPRSETAKLITKFIKLNNRENP 82
A A+SS K + + P S E+ + +PE PR++ K I +IK ++ ++P
Sbjct: 49 ATAASSDPTTTTKTREPRGIMKPRPVSPEMQDVVGVPEIPRTQALKRIWAYIKEHDLQDP 108
Query: 83 GMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
K+D++ +EKLK + GK+R+G EIAKL+ F+
Sbjct: 109 QNKRDIICDEKLKKIFEGKERVGFLEIAKLIGPHFL 144
>gi|33667910|gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
Length = 148
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 8 KAAMAAMKGAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETA 67
+ MAA K + G A +++ + ++K K + ++P+ L +F+ E R++
Sbjct: 39 RTLMAAAKTSAGKTPPATTTTAAGKGRSKGILKPQPISPA----LQKFVGTSEISRTDAV 94
Query: 68 KLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
K I +IK NN +NP KK++ ++ LK++ +GKD++G EIAKLLS F K
Sbjct: 95 KKIWDYIKTNNLQNPANKKEINCDDMLKTIFAGKDKVGFLEIAKLLSFHFQK 146
>gi|18396594|ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical protein [Arabidopsis thaliana]
gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis thaliana]
gi|28372894|gb|AAO39929.1| At3g03590 [Arabidopsis thaliana]
gi|332640439|gb|AEE73960.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 143
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L +FL E R++ K I +IK ++ +NP K+++ +E LK + GKD++G EI+K
Sbjct: 74 LAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISK 133
Query: 112 LLSGQFVKTG 121
LLS FVKT
Sbjct: 134 LLSPHFVKTA 143
>gi|21593643|gb|AAM65610.1| unknown [Arabidopsis thaliana]
Length = 143
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L +FL E R++ K I +IK ++ +NP K+++ +E LK + GKD++G EI+K
Sbjct: 74 LAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISK 133
Query: 112 LLSGQFVKTG 121
LLS FVKT
Sbjct: 134 LLSPHFVKTA 143
>gi|297833030|ref|XP_002884397.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
gi|297330237|gb|EFH60656.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
Length = 145
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L +FL E R++ K I +IK ++ +NP K+++ +E LK + GKD++G EI+K
Sbjct: 76 LAQFLGTGETTRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISK 135
Query: 112 LLSGQFVKTG 121
LLS FVKT
Sbjct: 136 LLSPHFVKTA 145
>gi|226532221|ref|NP_001150804.1| LOC100284437 [Zea mays]
gi|195641974|gb|ACG40455.1| SWIb domain-containing protein [Zea mays]
Length = 142
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Query: 31 AQAKAKAKGKT--KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDL 88
A K +A G T KSV+P+ + +G P PR+E K + +IK +N ++P KK +
Sbjct: 56 APKKKRATGITQPKSVSPALQAIVGD----PVIPRTEVLKRLWAYIKEHNLQDPSDKKVV 111
Query: 89 LGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
+ +EKLK L +G++R+G EIAKLL+ FVK
Sbjct: 112 VCDEKLKVLFAGRERVGFLEIAKLLNPLFVK 142
>gi|224103703|ref|XP_002313162.1| predicted protein [Populus trichocarpa]
gi|222849570|gb|EEE87117.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 25 AASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGM 84
A++S + K + V+P E+ F+ PE R++ KLI IK +N ++P
Sbjct: 51 CATASTGNRAPRGIMKPRRVSP----EMADFIGAPEVSRTQALKLIWAHIKEHNLQDPSN 106
Query: 85 KKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
KK+++ +EKLK + +G+D++G EIA L+S F+K
Sbjct: 107 KKNIICDEKLKKIFAGRDQVGFLEIAGLISPHFLK 141
>gi|297851606|ref|XP_002893684.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339526|gb|EFH69943.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 11 MAAM-KGAGGLK--LQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETA 67
MAA+ + GG + + AAS + KG K++ S +L F E R
Sbjct: 1 MAAISRVFGGFRTLMSKAASVEAVTVAGEGKGIFKTLPVSQ--QLASFAGESELTRGSAL 58
Query: 68 KLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
K + +++KL+N +NP KK++ ++KLK++ GKD++GI EI KLLS F K+
Sbjct: 59 KKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMKLLSPHFPKS 111
>gi|242032907|ref|XP_002463848.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
gi|241917702|gb|EER90846.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
Length = 143
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 31 AQAKAKAKGKT--KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDL 88
A K +A G T K V+P+ + +G P PR+E K + +IK +N ++P KK +
Sbjct: 57 APKKKRATGITQPKPVSPALQAIVGE----PVIPRTEALKRLWAYIKEHNLQDPSDKKVV 112
Query: 89 LGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
+ +EKLK L +G++R+G EIAKLL+ FVK
Sbjct: 113 ICDEKLKVLFAGRERVGFLEIAKLLNPHFVK 143
>gi|357114653|ref|XP_003559112.1| PREDICTED: upstream activation factor subunit UAF30-like
[Brachypodium distachyon]
Length = 138
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E PR+E K + +IK NN ++P KK ++ ++KLK+L +G++R+G EIAKLL+ FVK
Sbjct: 77 EVPRTEAIKRLWAYIKQNNLQDPMDKKVIVCDQKLKALFAGRERVGFLEIAKLLNPHFVK 136
>gi|297836126|ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331785|gb|EFH62204.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 141
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 12/114 (10%)
Query: 13 AMKGAGGLKLQAAASSSKAQAKAKAKGK--------TKSVAPSSTSELGRFLNIPEPPRS 64
A A L+L A +S+ A ++ A K + V+P E+ + +PE R+
Sbjct: 32 ASHPAAKLRLVRAVTSATASSEPTATNKRVPRGIMKPRPVSP----EMQDIVELPEIART 87
Query: 65 ETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
+ K I +IK ++ ++P K+++L +EKLK + G+DR+G EIAKL+ F+
Sbjct: 88 QALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>gi|255555227|ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
gi|223542031|gb|EEF43575.1| brg-1 associated factor, putative [Ricinus communis]
Length = 141
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 24 AAASSSKAQAKAKAKG--KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNREN 81
A SS+ Q + + +G K + V+P E+ + E PR++ K I IK NN ++
Sbjct: 48 CATVSSQQQEQRRPRGIMKPRRVSP----EMAELVGASEIPRTQALKRIWAHIKENNLQD 103
Query: 82 PGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
P KK ++ +EKLK + G+DR+G E+A L+S F+K
Sbjct: 104 PENKKIIICDEKLKKIFGGRDRVGFLEVAGLISPHFLK 141
>gi|224056218|ref|XP_002298761.1| predicted protein [Populus trichocarpa]
gi|118485810|gb|ABK94753.1| unknown [Populus trichocarpa]
gi|222846019|gb|EEE83566.1| predicted protein [Populus trichocarpa]
Length = 140
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
K K V+P E+ F+ PE R++ KLI IK N ++P KK+++ +EKLK +
Sbjct: 65 KPKRVSP----EMADFVGAPEVSRTQVLKLIWAHIKERNLQDPSNKKNIICDEKLKKIFP 120
Query: 100 GKDRIGIPEIAKLLSGQFVK 119
G+D++G EIA L+S F+K
Sbjct: 121 GRDQVGFLEIAGLISPHFLK 140
>gi|297850146|ref|XP_002892954.1| hypothetical protein ARALYDRAFT_471958 [Arabidopsis lyrata subsp.
lyrata]
gi|297338796|gb|EFH69213.1| hypothetical protein ARALYDRAFT_471958 [Arabidopsis lyrata subsp.
lyrata]
Length = 117
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 17 AGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKL 76
AG + A A++ K Q K + + V+PSS +G FL IP+ RSE+ LI+K+I+L
Sbjct: 5 AGKVLRTATAAARKFQQKQFSATSSAPVSPSSG--VGSFLGIPKIRRSESDLLISKYIRL 62
Query: 77 NNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKTG 121
+ KK EEKL +LSG+DR+GI E KLL G+ KTG
Sbjct: 63 A--QGRLTKKGDFTEEKLTKMLSGEDRVGIGETMKLLEGR--KTG 103
>gi|14423526|gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]
Length = 144
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 58 IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
+PE PR++ K I +IK ++ ++P K+D+L +EKLK + GK+R+G EIAKL+ F
Sbjct: 84 VPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPHF 143
Query: 118 V 118
+
Sbjct: 144 L 144
>gi|15235320|ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|4455174|emb|CAB36706.1| putative protein [Arabidopsis thaliana]
gi|7270379|emb|CAB80146.1| putative protein [Arabidopsis thaliana]
gi|24899741|gb|AAN65085.1| putative protein [Arabidopsis thaliana]
gi|332660955|gb|AEE86355.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 144
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 58 IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
+PE PR++ K I +IK ++ ++P K+D+L +EKLK + GK+R+G EIAKL+ F
Sbjct: 84 VPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPHF 143
Query: 118 V 118
+
Sbjct: 144 L 144
>gi|14488372|gb|AAK63939.1|AC084282_20 hypothetical protein [Oryza sativa Japonica Group]
gi|108711209|gb|ABF99004.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|125545801|gb|EAY91940.1| hypothetical protein OsI_13627 [Oryza sativa Indica Group]
gi|215769247|dbj|BAH01476.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 144
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E PR+E K + +IK +N ++P KK ++ +EKLK L +G++R+G E+AKLL+ FVK
Sbjct: 85 EIPRTEALKRLWAYIKQHNLQDPADKKVIVCDEKLKVLFAGQERVGFLEVAKLLNPHFVK 144
>gi|21553903|gb|AAM62986.1| unknown [Arabidopsis thaliana]
Length = 144
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 58 IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
+PE PR++ K I +IK ++ ++P K+D+L +EKLK + GK+R+G EIAKL+ F
Sbjct: 84 VPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPHF 143
Query: 118 V 118
+
Sbjct: 144 L 144
>gi|449432287|ref|XP_004133931.1| PREDICTED: uncharacterized protein LOC101218027 [Cucumis sativus]
Length = 157
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
K V+P+ L FL + E RS+ I +IKL+N +NP K+++ ++KLK++
Sbjct: 81 KVTQVSPA----LSNFLGVSEASRSDAVTQIWSYIKLHNLQNPDNKREIYCDDKLKAIFE 136
Query: 100 GKDRIGIPEIAKLLSGQFVK 119
G++++G EI K L+ FVK
Sbjct: 137 GREKVGFLEIGKSLARHFVK 156
>gi|18398106|ref|NP_564382.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|12321306|gb|AAG50727.1|AC079041_20 hypothetical protein [Arabidopsis thaliana]
gi|12597845|gb|AAG60155.1|AC074360_20 hypothetical protein [Arabidopsis thaliana]
gi|21537302|gb|AAM61643.1| unknown [Arabidopsis thaliana]
gi|89001005|gb|ABD59092.1| At1g31760 [Arabidopsis thaliana]
gi|332193268|gb|AEE31389.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 112
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPE 108
+ +L F E R K + +++KL+N +NP KK++ ++KLK++ GKD++GI E
Sbjct: 40 SQQLASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITE 99
Query: 109 IAKLLSGQFVKT 120
I KLLS F K+
Sbjct: 100 IMKLLSPHFPKS 111
>gi|351725129|ref|NP_001235290.1| uncharacterized protein LOC100306198 [Glycine max]
gi|255627841|gb|ACU14265.1| unknown [Glycine max]
Length = 148
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 26 ASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMK 85
+ SSK K + K + V+P E+ + PE R++ K I +IK NN ++P K
Sbjct: 54 SQSSKPARKIRGIMKPRKVSP----EMEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDK 109
Query: 86 KDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKTGS 122
+ + +EKLK + +GKD++ + EIA+L+S F+K+ S
Sbjct: 110 RTINCDEKLKKVFAGKDQVEMLEIARLISPHFLKSES 146
>gi|18397658|ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein [Arabidopsis thaliana]
gi|3650030|gb|AAC61285.1| expressed protein [Arabidopsis thaliana]
gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 141
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
Query: 13 AMKGAGGLKLQAAASSSKAQAKAKAKGK--------TKSVAPSSTSELGRFLNIPEPPRS 64
A A L+L A +S+ ++ A K + V+P E+ + +PE R+
Sbjct: 32 ASHPAAKLRLVRAVTSATESSEPTATNKRVPRGIMKPRPVSP----EMQDIVELPEIART 87
Query: 65 ETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
+ K I +IK ++ ++P K+++L +EKLK + G+DR+G EIAKL+ F+
Sbjct: 88 QALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>gi|351725697|ref|NP_001235054.1| uncharacterized protein LOC100499975 [Glycine max]
gi|255628211|gb|ACU14450.1| unknown [Glycine max]
Length = 139
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 24 AAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPG 83
+ SSK K + K + V+P E+ + PE R++ K I +IK NN ++P
Sbjct: 43 TVSQSSKPARKIRGIMKPRKVSP----EMEDLVGAPEMARTQVLKRIWAYIKDNNLQDPT 98
Query: 84 MKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKTGS 122
K+ + +EKLK + +GKD++ + EIA+L+S F+K+ S
Sbjct: 99 DKRTINCDEKLKKVFAGKDQVEMLEIARLISPHFLKSES 137
>gi|19698859|gb|AAL91165.1| unknown protein [Arabidopsis thaliana]
gi|24899679|gb|AAN65054.1| unknown protein [Arabidopsis thaliana]
Length = 141
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
Query: 13 AMKGAGGLKLQAAASSSKAQAKAKAKGK--------TKSVAPSSTSELGRFLNIPEPPRS 64
A A L+L A +S+ ++ A K + V+P E+ + +PE R+
Sbjct: 32 ASHPAAKLRLVRAVTSATESSEPTATNKRVPRGIMKPRPVSP----EMQDIVELPEIART 87
Query: 65 ETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
+ K I +IK ++ ++P K+++L +EKLK + G+DR+G EIAKL+ F+
Sbjct: 88 QALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141
>gi|21593713|gb|AAM65680.1| unknown [Arabidopsis thaliana]
Length = 141
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
K + V+P E+ + +PE R++ K I +IK ++ ++P K+++L +EKLK +
Sbjct: 67 KPRPVSP----EMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLKKIFE 122
Query: 100 GKDRIGIPEIAKLLSGQFV 118
G+DR+G EIAKL+ F+
Sbjct: 123 GRDRVGFLEIAKLIGPHFL 141
>gi|326491561|dbj|BAJ94258.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 146
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L +F P RS K++ ++K N+ +NP KK+++ +EKLK++ G++ + + E+ K
Sbjct: 77 LSKFGGAPNISRSGVLKIVWDYVKANSLQNPANKKEIICDEKLKTIFDGRNTVHMTEVTK 136
Query: 112 LLSGQFVKT 120
LLS FVK+
Sbjct: 137 LLSPHFVKS 145
>gi|242085638|ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
gi|241943937|gb|EES17082.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
Length = 147
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 40 KTKSVAPSSTSELGRFLN-IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLL 98
K K ++P EL F+ PE PR+E KL+ IK NN ++P KK ++ ++KLK +
Sbjct: 71 KPKPISP----ELREFVGGAPELPRTEAIKLVWAHIKGNNLQDPNDKKIIICDDKLKKIF 126
Query: 99 SGKDRIGIPEIAKLLSGQFVK 119
G+DR+G EI+ LL+ F K
Sbjct: 127 GGRDRVGFLEISGLLNPHFQK 147
>gi|226498430|ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea mays]
gi|195619068|gb|ACG31364.1| hypothetical protein [Zea mays]
gi|223975083|gb|ACN31729.1| unknown [Zea mays]
gi|413942035|gb|AFW74684.1| hypothetical protein ZEAMMB73_000211 [Zea mays]
Length = 143
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 46 PSSTSELGRFLN-IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRI 104
P ST EL F+ E PR+E KL+ IK NN ++P KK ++ +EKLK + G+DR+
Sbjct: 70 PIST-ELREFVGGAAELPRTEAIKLVWAHIKGNNLQDPNNKKIIICDEKLKKIFGGRDRV 128
Query: 105 GIPEIAKLLSGQFVK 119
G EI+ LL+ F K
Sbjct: 129 GFLEISGLLNPHFQK 143
>gi|388522755|gb|AFK49439.1| unknown [Lotus japonicus]
Length = 132
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 22 LQAAASSSKAQAKAKAKG--KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNR 79
+ +A S + A K +G K + ++P S G +PE R++ K I +IK NN
Sbjct: 37 VTSATVSQPSAAGNKIRGIMKPRKISPEMQSICG----VPEISRTQALKHIWAYIKENNL 92
Query: 80 ENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
++P KK + +EKLK + +GKD +G+ +IA L+S F+K
Sbjct: 93 QDPENKKLIRCDEKLKKVFAGKDEVGMLQIAGLISPHFLK 132
>gi|242063920|ref|XP_002453249.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
gi|241933080|gb|EES06225.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
Length = 131
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 49 TSELGRFLN-IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIP 107
++EL RF PE RS+ KLI IK + ++P K ++ + LKSL G+DRIG+
Sbjct: 59 SAELSRFAGGAPEVARSQAVKLIWAHIKAHGLQDPAKKTEINCDATLKSLFGGRDRIGML 118
Query: 108 EIAKLLSGQFVK 119
EI KLL F+K
Sbjct: 119 EIMKLLRPHFLK 130
>gi|116784051|gb|ABK23195.1| unknown [Picea sitchensis]
gi|148907345|gb|ABR16808.1| unknown [Picea sitchensis]
Length = 129
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 45/68 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
+ +FL + E PR++ K I ++IK + ++P +++++ +E LKS+ G++R+G EI+
Sbjct: 61 MQKFLGVSEIPRTKAIKKIWEYIKEKDLQDPANRREIVCDENLKSIFGGRERVGFLEISG 120
Query: 112 LLSGQFVK 119
L+ F+K
Sbjct: 121 LMKPHFIK 128
>gi|357152250|ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825851 [Brachypodium
distachyon]
Length = 153
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E PR+E K+I IK NN ++P KK ++ ++KLK + G+DR+G EI+ LL+ F K
Sbjct: 94 ELPRTEALKIIWAHIKGNNLQDPANKKIIVCDDKLKKIFGGRDRVGFLEISGLLNPHFQK 153
>gi|218186922|gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indica Group]
gi|222617148|gb|EEE53280.1| hypothetical protein OsJ_36231 [Oryza sativa Japonica Group]
Length = 78
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E PR+E K+I IK NN ++P KK ++ +EKLK + G+DR+G EI+ LL+ F K
Sbjct: 19 ELPRTEALKIIWAHIKGNNLQDPNNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 78
>gi|254446854|ref|ZP_05060329.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
gi|198256279|gb|EDY80588.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
Length = 77
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR+E K + +IK N+ +NP K+++L + KLK++ GKD++ + E+ KL+S VK
Sbjct: 20 PRTELTKKLWDYIKSNDLQNPENKREILADAKLKAVFDGKDKVSMFEMTKLVSNHVVK 77
>gi|197105844|ref|YP_002131221.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
gi|196479264|gb|ACG78792.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
Length = 85
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 33 AKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEE 92
AKA K + PS+ EL + + + R ET + +IK N +NP K++++ +
Sbjct: 2 AKATTNALQKPLTPSA--ELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADA 59
Query: 93 KLKSLLSGKDRIGIPEIAKLLSGQF 117
KLK + GKDR+ + E++K LSG
Sbjct: 60 KLKPIFGGKDRVSMFEMSKHLSGHL 84
>gi|449438339|ref|XP_004136946.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 140
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPE 108
+ EL + PE R++ K+I +IK NN + P KK + +EKLK + GKD +G E
Sbjct: 71 SPELQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLE 130
Query: 109 IAKLLSGQFV 118
IA L+S F+
Sbjct: 131 IAGLISPHFL 140
>gi|385305614|gb|EIF49575.1| swib domain-containing protein [Dekkera bruxellensis AWRI1499]
Length = 190
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 49 TSELGRFLNIPEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIP 107
T EL RFL E R + +++ K+IK NN +NP +K++L ++++K + D+IG+
Sbjct: 51 TPELARFLGTTEQVSRVDAIRIMWKYIKENNLQNPKNRKEILCDDRMKPIFG--DKIGMF 108
Query: 108 EIAKLLSGQFVKTGS 122
E +K++S F++ S
Sbjct: 109 ETSKVISKHFIRGNS 123
>gi|195629858|gb|ACG36570.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E RSE KL+ IK + +NP K ++ + LKSL G+D+IG+ E++KLLS F+K
Sbjct: 59 EVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATLKSLFGGRDKIGMMEVSKLLSPHFLK 118
>gi|226510371|ref|NP_001150291.1| LOC100283921 precursor [Zea mays]
gi|195605564|gb|ACG24612.1| SWIb domain-containing protein [Zea mays]
gi|195638128|gb|ACG38532.1| SWIb domain-containing protein [Zea mays]
gi|195653081|gb|ACG46008.1| SWIb domain-containing protein [Zea mays]
gi|223947003|gb|ACN27585.1| unknown [Zea mays]
gi|413935440|gb|AFW69991.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E RSE KL+ IK + +NP K ++ + LKSL G+D+IG+ E++KLLS F+K
Sbjct: 59 EVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATLKSLFGGRDKIGMMEVSKLLSPHFLK 118
>gi|195605408|gb|ACG24534.1| SWIb domain-containing protein [Zea mays]
Length = 116
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E RSE KL+ IK + +NP K ++ + LKSL G+D+IG+ E++KLLS F+K
Sbjct: 56 EVARSEAIKLVWAHIKAHGLQNPSNKTEINCDATLKSLFGGRDKIGMMEVSKLLSPHFLK 115
Query: 120 T 120
Sbjct: 116 N 116
>gi|18394495|ref|NP_564027.1| uncharacterized protein [Arabidopsis thaliana]
gi|8778474|gb|AAF79482.1|AC022492_26 F1L3.22 [Arabidopsis thaliana]
gi|21593649|gb|AAM65616.1| unknown [Arabidopsis thaliana]
gi|26450302|dbj|BAC42267.1| unknown protein [Arabidopsis thaliana]
gi|28827372|gb|AAO50530.1| unknown protein [Arabidopsis thaliana]
gi|332191479|gb|AEE29600.1| uncharacterized protein [Arabidopsis thaliana]
Length = 122
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 55 FLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLS 114
FL IP+ RSE+ L++K+I++ + KK EEKLK +LSG+DR+GI E KLL
Sbjct: 46 FLGIPKIIRSESDLLVSKYIRIA--QGRLTKKGDYTEEKLKKMLSGEDRVGIGETMKLLE 103
Query: 115 GQ 116
G+
Sbjct: 104 GR 105
>gi|302796039|ref|XP_002979782.1| hypothetical protein SELMODRAFT_59520 [Selaginella moellendorffii]
gi|302807501|ref|XP_002985445.1| hypothetical protein SELMODRAFT_49456 [Selaginella moellendorffii]
gi|300146908|gb|EFJ13575.1| hypothetical protein SELMODRAFT_49456 [Selaginella moellendorffii]
gi|300152542|gb|EFJ19184.1| hypothetical protein SELMODRAFT_59520 [Selaginella moellendorffii]
Length = 79
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 44 VAPSSTSELGR-FLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKD 102
V P S + GR F + E R + K + +IK +N ++P K+++L +EKLK LS KD
Sbjct: 5 VVPISAA--GRKFFGLQEMSRIDAMKQMWVYIKSHNLQDPEKKRNILPDEKLKQFLSCKD 62
Query: 103 RIGIPEIAKLLSGQFVK 119
RI + EI LLS F K
Sbjct: 63 RIDMTEIPGLLSPHFAK 79
>gi|194693822|gb|ACF80995.1| unknown [Zea mays]
Length = 134
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 49 TSELGRFLN-IPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIP 107
+ E RF PE RSE KLI IK + +NP K ++ + LKSL G+D++G+
Sbjct: 62 SDEFRRFAGGAPEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSLFGGRDKVGML 121
Query: 108 EIAKLLSGQFVK 119
EI +LL+ F K
Sbjct: 122 EINRLLNAHFPK 133
>gi|212722732|ref|NP_001132227.1| uncharacterized protein LOC100193662 [Zea mays]
gi|195621502|gb|ACG32581.1| SWIb domain-containing protein [Zea mays]
Length = 134
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 59 PEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
PE RSE KLI IK + +NP K ++ + LKSL G+D++G+ EI +LL+ F
Sbjct: 73 PEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSLFGGRDKVGMLEINRLLNTHFP 132
Query: 119 K 119
K
Sbjct: 133 K 133
>gi|147860060|emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 30 KAQAKAKAKGKTKSVAPSSTSE-LGRFLNIPEP--PRSETAKLITKFIKLNNRENPGMKK 86
K + K + G + +AP S+ L +FLNI E R+E K I ++IK NN ++P K+
Sbjct: 238 KRKQKRQKGGNSGFLAPLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQDPSDKR 297
Query: 87 DLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
++ +EKLK L G + KLLS F+KT
Sbjct: 298 RIICDEKLKELFDVDSFNGFT-VPKLLSAHFIKT 330
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 28 SSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKD 87
S K+ + K +G S + EL +F+ +PE R+E K + I+ + ++P +++
Sbjct: 119 SKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQDPNNRRN 178
Query: 88 LLGEEKLKSLLSGKDRIGIPEIAKLLS 114
++ +E L++L G D I + ++ K LS
Sbjct: 179 IICDETLRALF-GVDSINMFQMNKALS 204
>gi|365986593|ref|XP_003670128.1| hypothetical protein NDAI_0E00690 [Naumovozyma dairenensis CBS 421]
gi|343768898|emb|CCD24885.1| hypothetical protein NDAI_0E00690 [Naumovozyma dairenensis CBS 421]
Length = 464
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 21 KLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRE 80
+++ + +AK + K T S L FL E R +T K I +IK N +
Sbjct: 153 RIEQRKNGGVGKAKKERKITTGSRKYLLLEPLKSFLGESELSRQDTVKRIWTYIKQNKLQ 212
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKTGS 122
+P +++ L + KLKSL G RI +P +AK++S + GS
Sbjct: 213 SPSDRREDLWDNKLKSLFQGYQRITVPIVAKIVSKYMLSLGS 254
>gi|393718831|ref|ZP_10338758.1| SWIB/MDM2 domain-containing protein [Sphingomonas echinoides ATCC
14820]
Length = 93
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 47 SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGI 106
+ ++ELG + + PRSE + +IK +N +NP K++++ +EKLK + GKD++ +
Sbjct: 22 TPSAELGAIVGTDKLPRSEVISKVWAYIKAHNLQNPENKREIVADEKLKKVF-GKDKVTM 80
Query: 107 PEIAKLLSGQ 116
E+ K L+G
Sbjct: 81 FEMNKHLAGH 90
>gi|389688892|ref|ZP_10178457.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590376|gb|EIM30660.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 90
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E + ++IK NN +NP K+++L ++KL+++ GKD++ + E+ K +
Sbjct: 34 PRTEVVSKVWEYIKANNLQNPANKREILADDKLQAVFGGKDKVSMFEMNKHFAQHL 89
>gi|406606814|emb|CCH41850.1| Dynamin-binding protein [Wickerhamomyces ciferrii]
Length = 1011
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
Query: 9 AAMAAMKGAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTS----------ELGRFLNI 58
A + G+G +K ++ ASSSK K K K V+PS S +L FL
Sbjct: 893 AKLQKESGSGRIKRKSNASSSKV---TKPKKPRKPVSPSGNSIAALSLNLSPKLAEFLGE 949
Query: 59 PEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
+ PR++ K + +++K N+ +NP K+++L ++K++ + K + + ++ K+LS
Sbjct: 950 QKLPRTQVVKKVWEYVKENDLQNPNDKREILCDDKMQGVFGKK--VTMFQLNKVLSQHLY 1007
Query: 119 K 119
K
Sbjct: 1008 K 1008
>gi|296004558|ref|XP_002808698.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|225631685|emb|CAX63969.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 131
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 50 SELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEI 109
S L FLN R K K+IK NN +NP MK+ ++ ++KLK +L KD + I E+
Sbjct: 59 SPLKEFLNADTASRVFVLKYAWKYIKDNNLQNPNMKRKIIPDDKLKQVL-DKDEVDILEV 117
Query: 110 AKLL 113
KLL
Sbjct: 118 PKLL 121
>gi|332186843|ref|ZP_08388585.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
gi|332013176|gb|EGI55239.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
Length = 86
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V PS ELG + + PRS+ + +IK NN +NP K+++L ++KLK + GKD+
Sbjct: 14 VQPSE--ELGAIVGNEKLPRSQVISKVWDYIKANNLQNPENKREILADDKLKKVF-GKDK 70
Query: 104 IGIPEIAKLLSGQFVK 119
+ E+ K +S K
Sbjct: 71 CTMFEMNKFISAHLKK 86
>gi|388569327|ref|ZP_10155726.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
gi|388263453|gb|EIK89044.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
Length = 85
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
PR+E KL+ ++IK NN +NP K+++L + KLK++ GKD + + E+ L+
Sbjct: 30 PRTEVVKLMWEYIKANNLQNPKNKRNILADAKLKAVF-GKDEVNMFEMTGLV 80
>gi|340789069|ref|YP_004754534.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
gi|340554336|gb|AEK63711.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
Length = 216
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK + +NP K++++ +EKLK++ GK + + E+ KL+S
Sbjct: 160 PRTEVTKKVWEYIKKHKLQNPENKRNIIADEKLKAVFGGKKEVSMFEMTKLISDHL 215
>gi|406984179|gb|EKE05280.1| hypothetical protein ACD_19C00370G0002 [uncultured bacterium]
Length = 85
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PRS+ K I ++IK + +NP K+++L +EKLK L GK + + E+ KL+S
Sbjct: 29 PRSQVVKKIWEYIKKYDLQNPANKRNILADEKLKLLFDGKGEVTMFEMTKLISKHI 84
>gi|398835468|ref|ZP_10592830.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
gi|398216254|gb|EJN02807.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
Length = 157
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK +N +NP K+++ ++KLK++ GK ++ + E+ KL+S
Sbjct: 101 PRTEVTKKVWEYIKKHNLQNPENKRNIDADDKLKAIFGGKKQVTMFEMTKLISAHL 156
>gi|357480689|ref|XP_003610630.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355511965|gb|AES93588.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388522227|gb|AFK49175.1| unknown [Medicago truncatula]
Length = 143
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 40 KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
K K ++P +G+ PE R++ K I IK +N +NP K+ + +EKLK + +
Sbjct: 68 KPKKISPEMQDLVGQ----PEISRTQALKSIWAHIKEHNLQNPEKKRLIRCDEKLKKVFA 123
Query: 100 GKDRIGIPEIAKLLSGQFV 118
G+D + + EIA L+S F+
Sbjct: 124 GRDEVDMLEIAGLISPHFL 142
>gi|389689629|ref|ZP_10178847.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590119|gb|EIM30405.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 86
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E + +IK NN +NP K++LL +EKL+++ GK ++ + E+ K +
Sbjct: 30 PRTEVVSKVWDYIKSNNLQNPENKRELLADEKLQAVFDGKSKVSMFEMNKHFAQHL 85
>gi|168029051|ref|XP_001767040.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681782|gb|EDQ68206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 39 GKTKS---VAPSSTSE-LGRFLNIPE--PPRSETAKLITKFIKLNNRENPGMKKDLLGEE 92
GK+K+ +AP S+ L +FL++ + R+E AK + +IK +N ++P KK +L ++
Sbjct: 291 GKSKTQGFLAPYPISDQLAKFLDVEDGKVSRAEAAKRMWAYIKDHNLQDPTNKKKILCDQ 350
Query: 93 KLKSLLSGKDRIGIPEIAKLLSGQFVK 119
L+ LL +G +++KLL F+K
Sbjct: 351 PLQDLLDCDHFVGF-DLSKLLKRHFIK 376
>gi|357483029|ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
gi|355513136|gb|AES94759.1| Upstream activation factor subunit spp27 [Medicago truncatula]
Length = 361
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 44 VAPSSTSE-LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKD 102
+AP S+ L +FL E RS+ K + +IK NN ++P K+ +L +EKLK L
Sbjct: 266 LAPLQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSDKRQILCDEKLKELFDVDS 325
Query: 103 RIGIPEIAKLLSGQFVK 119
+G + KLL+ F+K
Sbjct: 326 FVGFT-VTKLLAPHFIK 341
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 47 SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGI 106
S + +L F+ PE R+E K + +I+ + ++P +++++ +E L++L G D I +
Sbjct: 137 SLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALF-GVDTINM 195
Query: 107 PEIAKLLS 114
++ K+L+
Sbjct: 196 FQMNKVLA 203
>gi|5430749|gb|AAD43149.1|AC007504_4 Hypothetical Protein [Arabidopsis thaliana]
Length = 386
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 29 SKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDL 88
+K++ K K KG + S + EL F P+ R+E K++ K+IK NN ++P K+ +
Sbjct: 238 AKSEEKPKKKGGGFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTI 297
Query: 89 LGEEKLKSLL 98
+ +E L+SL
Sbjct: 298 ICDESLRSLF 307
>gi|197105527|ref|YP_002130904.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
gi|196478947|gb|ACG78475.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
Length = 86
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K + PSS EL + + R ET I +IK NN +NP K++++ + KLK + GK
Sbjct: 12 KPLTPSS--ELAAVVGSGQLSRGETVSKIWDYIKKNNLQNPQNKREIIADAKLKPIFDGK 69
Query: 102 DRIGIPEIAKLLSGQF 117
D++ + E+ K L+
Sbjct: 70 DKVSMFEMNKHLAKHL 85
>gi|42562626|ref|NP_175375.2| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|63003862|gb|AAY25460.1| At1g49520 [Arabidopsis thaliana]
gi|332194317|gb|AEE32438.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 372
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 29 SKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDL 88
+K++ K K KG + S + EL F P+ R+E K++ K+IK NN ++P K+ +
Sbjct: 238 AKSEEKPKKKGGGFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTI 297
Query: 89 LGEEKLKSLL 98
+ +E L+SL
Sbjct: 298 ICDESLRSLF 307
>gi|449461413|ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 23 QAAASSSKAQAKAKAKGKTKSVAPSSTSE-LGRFLNIPEP--PRSETAKLITKFIKLNNR 79
+ + S + K + KGK+ +AP S L FL E PRS+ K + +IK NN
Sbjct: 231 EEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNL 290
Query: 80 ENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
++P K+ ++ +E+LK L G ++KLL+ F+K
Sbjct: 291 QDPSDKRRIICDERLKELFDVDSFNGFT-VSKLLATHFIK 329
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 26 ASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMK 85
SS K + + K S++P +L F+ PE R+E K + I+ NN ++P +
Sbjct: 106 TSSEKVKKRGGGFTKLCSLSP----QLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNR 161
Query: 86 KDLLGEEKLKSLLSGKDRIGIPEIAKLLS 114
+++L +E LK+L G + I + ++ K LS
Sbjct: 162 RNILCDEPLKALF-GVNSINMFQMNKALS 189
>gi|399018413|ref|ZP_10720592.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
gi|398101529|gb|EJL91745.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
Length = 152
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK + +NP K+++ ++KLK + GK ++ + E+ KL+SG
Sbjct: 96 PRTEVTKKVWEYIKKHKLQNPENKRNIDADDKLKVVFGGKKQVSMFEMTKLISGHL 151
>gi|449527809|ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
sativus]
Length = 225
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 23 QAAASSSKAQAKAKAKGKTKSVAPSSTSE-LGRFLNIPEP--PRSETAKLITKFIKLNNR 79
+ + S + K + KGK+ +AP S L FL E PRS+ K + +IK NN
Sbjct: 124 EEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNL 183
Query: 80 ENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
++P K+ ++ +E+LK L G ++KLL+ F+K
Sbjct: 184 QDPSDKRRIICDERLKELFDVDSFNGF-TVSKLLATHFIK 222
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 47 SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGI 106
S + +L F+ PE R+E K + I+ NN ++P ++++L +E LK+L G + I +
Sbjct: 16 SLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF-GVNSINM 74
Query: 107 PEIAKLLS 114
++ K LS
Sbjct: 75 FQMNKALS 82
>gi|156095480|ref|XP_001613775.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802649|gb|EDL44048.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 140
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 28 SSKAQAKAKAKGKTKSVAPSS----------TSELGRFLNIPEPPRSETAKLITKFIKLN 77
S+ + K++ KGK +V S L FLN R K K+IK N
Sbjct: 36 STDNEEKSETKGKHTNVKEKKPNGLQIDCEIKSPLKEFLNTDTASRVFVLKYAWKYIKEN 95
Query: 78 NRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
N +NP K+ ++ +EKLK++L KD + + E+ KLL
Sbjct: 96 NLQNPNTKRKIIPDEKLKNVLE-KDEVDMLEVPKLL 130
>gi|297808905|ref|XP_002872336.1| hypothetical protein ARALYDRAFT_910992 [Arabidopsis lyrata subsp.
lyrata]
gi|297318173|gb|EFH48595.1| hypothetical protein ARALYDRAFT_910992 [Arabidopsis lyrata subsp.
lyrata]
Length = 157
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 77 NNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKTGSG 123
N +N K+ + +E LK + GKD++G EI+KLLS FVKT G
Sbjct: 25 NLYQNLADKRVIFCDETLKLIFEGKDKVGFLEISKLLSPYFVKTARG 71
>gi|221056991|ref|XP_002259633.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809705|emb|CAQ40407.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 140
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 50 SELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEI 109
S L FLN R K K+IK NN +NP K+ ++ +EKLK++L KD + + E+
Sbjct: 68 SPLKEFLNTDTASRVFVLKYAWKYIKDNNLQNPNTKRKIIPDEKLKNVLE-KDEVDMLEV 126
Query: 110 AKLL 113
KLL
Sbjct: 127 PKLL 130
>gi|389584152|dbj|GAB66885.1| hypothetical protein PCYB_102350 [Plasmodium cynomolgi strain B]
Length = 140
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 50 SELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEI 109
S L FLN R K K+IK NN +NP K+ ++ +EKLK++L KD + + E+
Sbjct: 68 SPLKEFLNTDTASRVFVLKYAWKYIKDNNLQNPNTKRKIIPDEKLKNVLE-KDEVDMLEV 126
Query: 110 AKLL 113
KLL
Sbjct: 127 PKLL 130
>gi|383640982|ref|ZP_09953388.1| SWIB/MDM2 domain-containing protein [Sphingomonas elodea ATCC
31461]
Length = 85
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 31 AQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLG 90
A+ KA+ G K V PS EL + + + PRSE + ++IK NN +NP K+++L
Sbjct: 2 AETKARG-GIAKPVTPSP--ELAKIVGTADLPRSEIVSKVWEYIKKNNLQNPANKREILA 58
Query: 91 EEKLKSLLSGKDRIGIPEIAKLLSGQ 116
++ LK + G D+ + E+ K L+
Sbjct: 59 DDTLKPIFGG-DKATMFEMNKHLAKH 83
>gi|170749922|ref|YP_001756182.1| SWIB/MDM2 domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656444|gb|ACB25499.1| SWIB/MDM2 domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 119
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPE 108
++ELG + PR E + +IK NN +NP K++++ ++KLK + GKD+ + E
Sbjct: 50 SAELGAIVGTSPLPRGEVVSKVWDYIKKNNLQNPQNKREIVADDKLKKVF-GKDKCSMFE 108
Query: 109 IAKLLSGQF 117
+ K L+
Sbjct: 109 MNKHLAAHL 117
>gi|393724614|ref|ZP_10344541.1| hypothetical protein SPAM2_13223 [Sphingomonas sp. PAMC 26605]
Length = 93
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQ 116
PRSE + +IK ++ +NP K++++ +EKLK + GKD++ + E+ K L+G
Sbjct: 37 PRSEVISKVWAYIKQHDLQNPENKREIVADEKLKKIF-GKDKVTMFEMNKHLAGH 90
>gi|395493643|ref|ZP_10425222.1| hypothetical protein SPAM26_17494 [Sphingomonas sp. PAMC 26617]
gi|404253972|ref|ZP_10957940.1| hypothetical protein SPAM266_11940 [Sphingomonas sp. PAMC 26621]
Length = 93
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPE 108
+ ELG + PRSE + ++IK ++ +NP K++++ +E LK + GKDR+ + E
Sbjct: 24 SPELGAIVGNDRLPRSEVISKVWEYIKKHDLQNPENKREIVADEALKKVF-GKDRVTMFE 82
Query: 109 IAKLLSGQF 117
+ K L+G
Sbjct: 83 MNKHLAGHM 91
>gi|357114418|ref|XP_003558997.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Brachypodium distachyon]
Length = 334
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 30 KAQAKAKAKGKTKSVAPSS-----------TSELGRFLNIPEP--PRSETAKLITKFIKL 76
K Q + K +GK + V S + +L F+ E RS+ K++ +IK
Sbjct: 231 KPQKREKNEGKKQKVGSSRPGTGLNAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKE 290
Query: 77 NNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
NN ++P ++ ++ +EKLK+L G ++KLLS F KT
Sbjct: 291 NNLQDPSDRRKIICDEKLKNLFQVDSFTGFT-VSKLLSPHFTKT 333
>gi|357114420|ref|XP_003558998.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Brachypodium distachyon]
Length = 328
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 30 KAQAKAKAKGKTKSVAPSS-----------TSELGRFLNIPEP--PRSETAKLITKFIKL 76
K Q + K +GK + V S + +L F+ E RS+ K++ +IK
Sbjct: 225 KPQKREKNEGKKQKVGSSRPGTGLNAPLQLSDDLANFIGTGESMLSRSDVVKIMWDYIKE 284
Query: 77 NNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
NN ++P ++ ++ +EKLK+L G ++KLLS F KT
Sbjct: 285 NNLQDPSDRRKIICDEKLKNLFQVDSFTGFT-VSKLLSPHFTKT 327
>gi|225165980|ref|ZP_03727735.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
gi|224799776|gb|EEG18250.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
Length = 90
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK NN ++ +K ++ ++KLK++ +GK + + E+ KL+SG
Sbjct: 33 PRTELTKKLWEYIKKNNLQDKKVKTNINADDKLKAVFNGKKTVSMFEMTKLVSGHL 88
>gi|297830558|ref|XP_002883161.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329001|gb|EFH59420.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 463
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 29 SKAQAKAKAKG-----KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPG 83
+K+ K K KG K S++P EL F + E R+E K++ K+IK NN ++P
Sbjct: 250 AKSVEKPKRKGGGGFAKVCSLSP----ELQAFTGVTELARTEVVKMLWKYIKENNLQDPN 305
Query: 84 MKKDLLGEEKLKSLLSGKDRIGIPEIAKLLS 114
K+ ++ +E L+SL + I + +++KLL+
Sbjct: 306 DKRIIICDESLRSLFPF-ESINMFQMSKLLT 335
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
R++ K + ++IK N+ ++P K+ ++ +EKLK L D + LL+ F+K
Sbjct: 405 RADVGKRLWEYIKQNDLQDPSDKRRIICDEKLKELFEV-DSFEDTSFSTLLTNHFIK 460
>gi|256423726|ref|YP_003124379.1| SWIB/MDM2 domain-containing protein [Chitinophaga pinensis DSM
2588]
gi|256038634|gb|ACU62178.1| SWIB/MDM2 domain protein [Chitinophaga pinensis DSM 2588]
Length = 106
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR+E K I +IK +N ++ K+ + +EKLK + +GKD+I + E+AK ++ Q VK
Sbjct: 50 PRTEITKKIWDYIKEHNLQDAQNKRLINADEKLKKVFNGKDQISMFELAKEMN-QHVK 106
>gi|134095941|ref|YP_001101016.1| hypothetical protein HEAR2779 [Herminiimonas arsenicoxydans]
gi|133739844|emb|CAL62895.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 150
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K V PS+ L + PR+E K + ++IK +NP K+ + ++KLK++ GK
Sbjct: 76 KPVTPSTV--LAAVIGAAPAPRTEVTKKVWEYIKKFKLQNPENKRMIDADDKLKAVFGGK 133
Query: 102 DRIGIPEIAKLLSGQF 117
++ + E+ KL+SG
Sbjct: 134 KQVSMFEMTKLISGHL 149
>gi|255562647|ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
gi|223538407|gb|EEF40013.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
R++ K + ++IK NN ++P K+ ++ +EKLK L G + KLLS FVKT
Sbjct: 266 RADVIKRMWEYIKQNNLQDPSDKRRIICDEKLKELFDVDTFNGFT-VTKLLSAHFVKT 322
>gi|222112503|ref|YP_002554767.1| DNA topoisomerase III [Acidovorax ebreus TPSY]
gi|221731947|gb|ACM34767.1| DNA topoisomerase III [Acidovorax ebreus TPSY]
Length = 981
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
R E K + +IK +N ++P K+ ++ ++KL+++ GKDRIG+ E+A +L
Sbjct: 927 RPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVF-GKDRIGMFELAGIL 976
>gi|121596274|ref|YP_988170.1| DNA topoisomerase III [Acidovorax sp. JS42]
gi|120608354|gb|ABM44094.1| DNA topoisomerase III [Acidovorax sp. JS42]
Length = 981
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
R E K + +IK +N ++P K+ ++ ++KL+++ GKDRIG+ E+A +L
Sbjct: 927 RPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVF-GKDRIGMFELAGIL 976
>gi|42565723|ref|NP_190429.2| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332644914|gb|AEE78435.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 183
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 16 GAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIK 75
G L +A +++ A +G + P S S L RF+ E S + + ++
Sbjct: 10 GCRTLMAKAVTNATATGAGVDRRGGIHKIFPVSES-LARFVGQSEVSFSTAMEKVEQYTD 68
Query: 76 LNNRENPGMKKDLLGEEKLKSLLSGKDR-IGIPEIAKLLSGQF--VKTGS 122
+N NP +++L ++ LK++ G+D+ +G+ E+ +LL F V+T S
Sbjct: 69 DHNLWNPENIEEILCDDNLKTIFDGQDKVVGVREMTELLLRHFPNVRTMS 118
>gi|393769784|ref|ZP_10358303.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
gi|392724788|gb|EIZ82134.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
Length = 123
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPE 108
+++LG + PR E + +IK +N +NP K+++L ++KLK + GKD+ + E
Sbjct: 54 SADLGAIVGTNPLPRGEVVSKVWDYIKKHNLQNPENKREILADDKLKKVF-GKDKCSMFE 112
Query: 109 IAKLLSGQF 117
+ K L+
Sbjct: 113 MNKHLAAHL 121
>gi|6523091|emb|CAB62349.1| putative protein [Arabidopsis thaliana]
Length = 205
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 16 GAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIK 75
G L +A +++ A +G + P S S L RF+ E S + + ++
Sbjct: 10 GCRTLMAKAVTNATATGAGVDRRGGIHKIFPVSES-LARFVGQSEVSFSTAMEKVEQYTD 68
Query: 76 LNNRENPGMKKDLLGEEKLKSLLSGKDR-IGIPEIAKLLSGQF--VKTGS 122
+N NP +++L ++ LK++ G+D+ +G+ E+ +LL F V+T S
Sbjct: 69 DHNLWNPENIEEILCDDNLKTIFDGQDKVVGVREMTELLLRHFPNVRTMS 118
>gi|300309713|ref|YP_003773805.1| hypothetical protein Hsero_0372 [Herbaspirillum seropedicae SmR1]
gi|300072498|gb|ADJ61897.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 175
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK N +N K+++ ++KLK++ GK ++ + E+ KL+S
Sbjct: 119 PRTEVTKKVWEYIKKNKLQNAENKRNIDADDKLKAIFGGKKQVTMFEMTKLISAHL 174
>gi|415952310|ref|ZP_11557154.1| DNA topoisomerase domain protein [Herbaspirillum frisingense GSF30]
gi|407757399|gb|EKF67387.1| DNA topoisomerase domain protein [Herbaspirillum frisingense GSF30]
Length = 76
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K + PS+ LG + PR+E K + ++IK N +N K+++ ++KLK++ GK
Sbjct: 2 KPLTPSAA--LGEVVGAKPLPRTEVTKKVWEYIKKNKLQNAENKRNIDADDKLKAIFGGK 59
Query: 102 DRIGIPEIAKLLSGQF 117
++ + E+ KL+S
Sbjct: 60 KQVTMFEMTKLISAHL 75
>gi|334185823|ref|NP_001190034.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332644915|gb|AEE78436.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 228
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 16 GAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIK 75
G L +A +++ A +G + P S S L RF+ E S + + ++
Sbjct: 10 GCRTLMAKAVTNATATGAGVDRRGGIHKIFPVSES-LARFVGQSEVSFSTAMEKVEQYTD 68
Query: 76 LNNRENPGMKKDLLGEEKLKSLLSGKDR-IGIPEIAKLLSGQF--VKTGS 122
+N NP +++L ++ LK++ G+D+ +G+ E+ +LL F V+T S
Sbjct: 69 DHNLWNPENIEEILCDDNLKTIFDGQDKVVGVREMTELLLRHFPNVRTMS 118
>gi|9280327|dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 29 SKAQAKAKAKG-----KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPG 83
+K+ K K KG K S++P EL F + E R+E KL+ K+IK NN ++P
Sbjct: 238 AKSVEKPKRKGGGGFAKVCSLSP----ELQAFTGVTELARTEVVKLLWKYIKENNLQDPN 293
Query: 84 MKKDLLGEEKLKSLL 98
K+ ++ +E +SL
Sbjct: 294 DKRSIICDESFRSLF 308
>gi|15230276|ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332642670|gb|AEE76191.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 462
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 29 SKAQAKAKAKG-----KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPG 83
+K+ K K KG K S++P EL F + E R+E KL+ K+IK NN ++P
Sbjct: 250 AKSVEKPKRKGGGGFAKVCSLSP----ELQAFTGVTELARTEVVKLLWKYIKENNLQDPN 305
Query: 84 MKKDLLGEEKLKSLL 98
K+ ++ +E +SL
Sbjct: 306 DKRSIICDESFRSLF 320
>gi|297799312|ref|XP_002867540.1| hypothetical protein ARALYDRAFT_354113 [Arabidopsis lyrata subsp.
lyrata]
gi|297313376|gb|EFH43799.1| hypothetical protein ARALYDRAFT_354113 [Arabidopsis lyrata subsp.
lyrata]
Length = 320
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 1 MAARGGGKAAMAAMKGAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPE 60
++A G + A + G + + + K T + P L +N+P
Sbjct: 191 VSALWGEQYMSAVCENIYGTNRSVLSFDGRLDCRRLKKAITDN--PKKLGNLIDLVNLPS 248
Query: 61 PPR-----SETAKL-----ITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIA 110
R S+ ++L + +IK NN ++P K ++ +EKLKS+L GK R+ + E+
Sbjct: 249 TLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNVVICDEKLKSILLGKQRVELVELP 308
Query: 111 KLLSGQFVK 119
L+ F K
Sbjct: 309 SLIKLHFPK 317
>gi|152982995|ref|YP_001354676.1| hypothetical protein mma_2986 [Janthinobacterium sp. Marseille]
gi|151283072|gb|ABR91482.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 146
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K V PS+ L + PR+E K + ++IK +N K+ + +EKLK++ GK
Sbjct: 72 KPVTPSAV--LAAVIGASPAPRTEVTKKVWEYIKKFKLQNEANKRMIDADEKLKAVFGGK 129
Query: 102 DRIGIPEIAKLLSGQF 117
++ + E+ KL+SG
Sbjct: 130 KQVSMFEMTKLISGHL 145
>gi|356537694|ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786835 [Glycine max]
Length = 346
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 30 KAQAKAKAKGKTKSVAPSSTSE-LGRFLNI--PEPPRSETAKLITKFIKLNNRENPGMKK 86
K + + K GK+ +AP S+ L FL E R++ K + +IK NN ++P K+
Sbjct: 252 KKEKRQKGGGKSGFLAPLQLSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKR 311
Query: 87 DLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
++ +EKLK L G + KLL+ F+KT
Sbjct: 312 KIICDEKLKELFDVDTFTGFT-VTKLLAPHFIKT 344
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%)
Query: 47 SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
S + +L F+ PE R+E K + +I+ N ++P +++++ +E+L+SL +
Sbjct: 150 SLSPQLQEFMGAPEMARTEVVKQLWAYIREKNLQDPNNRRNIICDERLRSLFN 202
>gi|220921314|ref|YP_002496615.1| SWIB/MDM2 domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219945920|gb|ACL56312.1| SWIB/MDM2 domain protein [Methylobacterium nodulans ORS 2060]
Length = 110
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 1 MAARGGGKAAMAAMKGAG-GLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIP 59
MA + K A A K A G K+ A S K A K + PS ELG +
Sbjct: 1 MATKTTKKEATEAEKPAAKGKKVAAPKSGDKPNAL------QKPLQPSP--ELGAIVGTK 52
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR E + ++I+ N+ +NP K+++L ++KLK + GKD+ + E+ K L+
Sbjct: 53 PIPRGEVVSKVWEYIRKNSLQNPENKREILADDKLKKVF-GKDKATMFEMNKYLAQHL 109
>gi|332286949|ref|YP_004418860.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
gi|330430902|gb|AEC22236.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
Length = 90
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I +IK ++ ++P ++++ ++KL+ L GK+++ + E+ KL+SG
Sbjct: 35 PRTEVTKKIWDYIKKHDLQDPKNRRNINADDKLRPLF-GKEQVSMFELTKLVSGHL 89
>gi|356496858|ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Glycine max]
Length = 337
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 30 KAQAKAKAKGKTKSVAPSSTSE-LGRFLNI--PEPPRSETAKLITKFIKLNNRENPGMKK 86
K + + K GK+ +AP S+ L FL E R++ K + +IK NN ++P K+
Sbjct: 243 KKEKRQKGGGKSGFLAPLQLSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKR 302
Query: 87 DLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
++ +EKLK L G + KLL+ F+KT
Sbjct: 303 KIICDEKLKELFDVDSFTGFT-VTKLLAPHFIKT 335
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 31/49 (63%)
Query: 51 ELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
+L F+ PE R+E K + +I+ N ++P +++++ +E+L+SL +
Sbjct: 145 QLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRSLFN 193
>gi|395763959|ref|ZP_10444628.1| hypothetical protein JPAM2_19696 [Janthinobacterium lividum PAMC
25724]
Length = 132
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + +IK + ++P ++ + ++KLK++ SGK ++ + E+ KL+S
Sbjct: 76 PRTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFSGKAQVSMFEMTKLISDHL 131
>gi|356496860|ref|XP_003517283.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Glycine max]
Length = 331
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 30 KAQAKAKAKGKTKSVAPSSTSE-LGRFLNI--PEPPRSETAKLITKFIKLNNRENPGMKK 86
K + + K GK+ +AP S+ L FL E R++ K + +IK NN ++P K+
Sbjct: 237 KKEKRQKGGGKSGFLAPLQLSDALVNFLGTGESELARTDVIKRMWDYIKGNNLQDPSDKR 296
Query: 87 DLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
++ +EKLK L G + KLL+ F+KT
Sbjct: 297 KIICDEKLKELFDVDSFTGFT-VTKLLAPHFIKT 329
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%)
Query: 47 SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
S + +L F+ PE R+E K + +I+ N ++P +++++ +E+L+SL +
Sbjct: 135 SLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRSLFN 187
>gi|294658451|ref|XP_002770785.1| DEHA2F09856p [Debaryomyces hansenii CBS767]
gi|202953140|emb|CAR66310.1| DEHA2F09856p [Debaryomyces hansenii CBS767]
Length = 247
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 20 LKLQAAASSSKAQAKAKAKGKTKSVAPSS--TSELGRFLNIPEPPRSETAKLITKFIKLN 77
+K Q AS K + K AK + + ++EL L + + R + K + +IK N
Sbjct: 99 VKRQKKASPKKTKEKDPAKNRNSAFFQEQHLSNELADVLGVEKCSRPQVVKQLWTYIKDN 158
Query: 78 NRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
N +NP K+ ++ + KL++L K +G E+ K LS K
Sbjct: 159 NLQNPDDKRQIICDTKLQALFKKK-SVGAFEMNKFLSHHIFK 199
>gi|424777976|ref|ZP_18204933.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
gi|422887172|gb|EKU29579.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
Length = 92
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I ++IK ++ ++P ++++ + KL+ L GKD++ + E+ KL+S
Sbjct: 37 PRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPLF-GKDQVSMFELTKLVSAHL 91
>gi|393759562|ref|ZP_10348375.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162123|gb|EJC62184.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 92
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I ++IK ++ ++P ++++ + KL+ L GKD++ + E+ KL+S
Sbjct: 37 PRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPLF-GKDQVSMFELTKLVSAHL 91
>gi|187251157|ref|YP_001875639.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
gi|186971317|gb|ACC98302.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
Length = 84
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 37 AKGKTKSVAP-SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLK 95
AK K +AP + ++EL + PR+E K + +IK +N ++ K+ + ++KLK
Sbjct: 2 AKANAKFMAPLTPSAELAAIVGSNPLPRTEVVKKMWDYIKKHNLQDAKNKRMINADDKLK 61
Query: 96 SLLSGKDRIGIPEIAKLLSGQF 117
+ +GK +I + E++K +S
Sbjct: 62 VIFNGKAQISMFEMSKYISSHL 83
>gi|424824856|ref|ZP_18249843.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
gi|333409955|gb|EGK68942.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
Length = 87
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR+E K + +IK +N ++P K+++L +E L + K+ I + ++ K LS VK
Sbjct: 30 PRTEIVKKVWDYIKKHNLQDPKNKRNILPDEALAKVFGSKNPIDMFQMTKALSSHIVK 87
>gi|413932976|gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays]
Length = 316
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
RS+ K + +IK NN ++P ++ ++ +EKLK LL + G ++KLL+ F KT
Sbjct: 259 RSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTGFT-VSKLLAPHFTKT 315
>gi|226508644|ref|NP_001147426.1| LOC100281035 [Zea mays]
gi|195611286|gb|ACG27473.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|413932975|gb|AFW67526.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 328
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
RS+ K + +IK NN ++P ++ ++ +EKLK LL + G ++KLL+ F KT
Sbjct: 271 RSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTGFT-VSKLLAPHFTKT 327
>gi|414880478|tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
Length = 1254
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 69 LITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
L+ +IK NN +P K ++ + L+SL GKDR+G E+ KLL F
Sbjct: 228 LLLDYIKRNNLRDPRRKSQIICDSLLQSLF-GKDRVGHFEMLKLLESHF 275
>gi|223944301|gb|ACN26234.1| unknown [Zea mays]
Length = 70
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
RS+ K + +IK NN ++P ++ ++ +EKLK LL + G ++KLL+ F KT
Sbjct: 13 RSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTGFT-VSKLLAPHFTKT 69
>gi|409408941|ref|ZP_11257376.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
gi|386432263|gb|EIJ45091.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
Length = 158
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK + +N K+++ ++KLK++ GK ++ + E+ KL+S
Sbjct: 102 PRTEVTKKVWEYIKKHKLQNAENKRNIDADDKLKAIFGGKKQVTMFEMTKLISAHL 157
>gi|406695566|gb|EKC98869.1| hypothetical protein A1Q2_06840 [Trichosporon asahii var. asahii
CBS 8904]
Length = 227
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L F+N + R +T K I +IK N+ ++P K+ +L ++K+K++ D++ + + K
Sbjct: 149 LSAFVNETKLSRPQTVKRIWDYIKANDLQDPNDKRYILCDDKMKTVFHT-DKLHMFTMNK 207
Query: 112 LLSGQF 117
LL+ F
Sbjct: 208 LLAEHF 213
>gi|449531627|ref|XP_004172787.1| PREDICTED: upstream activation factor subunit spp27-like [Cucumis
sativus]
Length = 100
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V S S LG F K + +IK NN ++P K ++ +EKLKS+L GK +
Sbjct: 34 VGHSQISRLGCF------------KCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPK 81
Query: 104 IGIPEIAKLLSGQFVKTG 121
+ + E+ L+ F K
Sbjct: 82 VELAELPALIKLHFPKNS 99
>gi|242038013|ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
gi|241920255|gb|EER93399.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
Length = 326
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
RS+ K + +IK NN ++P ++ ++ +EKLK LL + G ++KLL+ F KT
Sbjct: 269 RSDVVKKMWDYIKENNLQDPSDRRKIICDEKLKDLLGVETFTGFT-VSKLLAPHFTKT 325
>gi|389873151|ref|YP_006380570.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
gi|388538400|gb|AFK63588.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
Length = 91
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 26 ASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMK 85
A++S+ A+ K + PS+ EL + + PR+E K I ++IK ++ ++P +
Sbjct: 2 ATTSEKPARKPNAAFMKPLTPSA--ELAQVIGSDPLPRTEVTKKIWEYIKKHDLQDPKNR 59
Query: 86 KDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
+++ + KL+ + GKD++ + E+ KL+S
Sbjct: 60 RNINADAKLRPIF-GKDQVSMFEMTKLVSTHL 90
>gi|401885774|gb|EJT49862.1| hypothetical protein A1Q1_01014 [Trichosporon asahii var. asahii
CBS 2479]
Length = 251
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L F+N + R +T K I +IK N+ ++P K+ +L ++K+K++ D++ + + K
Sbjct: 173 LSAFVNETKLSRPQTVKRIWDYIKANDLQDPNDKRYILCDDKMKTVFHT-DKLHMFTMNK 231
Query: 112 LLSGQF 117
LL+ F
Sbjct: 232 LLAEHF 237
>gi|163852543|ref|YP_001640586.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
PA1]
gi|218531380|ref|YP_002422196.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
CM4]
gi|240139877|ref|YP_002964354.1| hypothetical protein MexAM1_META1p3340 [Methylobacterium extorquens
AM1]
gi|254562299|ref|YP_003069394.1| hypothetical protein METDI3911 [Methylobacterium extorquens DM4]
gi|418058520|ref|ZP_12696492.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|163664148|gb|ABY31515.1| SWIB/MDM2 domain protein [Methylobacterium extorquens PA1]
gi|218523683|gb|ACK84268.1| SWIB/MDM2 domain protein [Methylobacterium extorquens CM4]
gi|240009851|gb|ACS41077.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254269577|emb|CAX25547.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
gi|373567944|gb|EHP93901.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 110
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR E + + IK +N +NP K+++L ++KLK + GKD+ + E+ K L+
Sbjct: 54 PRGEVVSKVWEHIKKHNLQNPENKREILADDKLKKIF-GKDKCSMFEMNKHLAAHL 108
>gi|171913835|ref|ZP_02929305.1| hypothetical protein VspiD_21690 [Verrucomicrobium spinosum DSM
4136]
Length = 92
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PRSE K + +IK N ++P K ++ +E LK++ GK ++ + E+ KL+S
Sbjct: 36 PRSEVTKKLWDYIKKNGLQDPKKKTNINADEALKAVFGGKKQVTMFEMTKLVSAHI 91
>gi|359480441|ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
vinifera]
Length = 296
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 28 SSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKD 87
S K+ + K +G S + EL +F+ +PE R+E K + I+ + ++P +++
Sbjct: 119 SKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQDPNNRRN 178
Query: 88 LLGEEKLKSLLSGKDRIGIPEIAKLLS 114
++ +E L++L G D I + ++ K LS
Sbjct: 179 IICDETLRALF-GVDSINMFQMNKALS 204
>gi|428169722|gb|EKX38653.1| hypothetical protein GUITHDRAFT_144048 [Guillardia theta CCMP2712]
Length = 297
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L F+ P R+E K I ++K N+ ++ K+ ++ +EKL+ + + R+ + ++ +
Sbjct: 169 LANFMGAPSGKRTEVVKAIWDYVKQNDLQDAKDKRFIMVDEKLEQIFGKRKRVHMFKMNQ 228
Query: 112 LLSGQF 117
LLS F
Sbjct: 229 LLSPHF 234
>gi|302144157|emb|CBI23284.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 28 SSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKD 87
S K+ + K +G S + EL +F+ +PE R+E K + I+ + ++P +++
Sbjct: 119 SKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQDPNNRRN 178
Query: 88 LLGEEKLKSLLSGKDRIGIPEIAKLLS 114
++ +E L++L G D I + ++ K LS
Sbjct: 179 IICDETLRALF-GVDSINMFQMNKALS 204
>gi|15835359|ref|NP_297118.1| hypothetical protein TC0745 [Chlamydia muridarum Nigg]
gi|270285535|ref|ZP_06194929.1| hypothetical protein CmurN_03778 [Chlamydia muridarum Nigg]
gi|270289546|ref|ZP_06195848.1| hypothetical protein CmurW_03878 [Chlamydia muridarum Weiss]
gi|301336932|ref|ZP_07225134.1| hypothetical protein CmurM_03835 [Chlamydia muridarum MopnTet14]
gi|7190773|gb|AAF39552.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 86
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR+E K I +IK N ++P K+++ ++KL + KD + + ++ K++S VK
Sbjct: 29 PRTEIIKKIWDYIKQNKLQDPTNKRNINPDDKLAKVFGSKDPVDMFQMTKIVSKHIVK 86
>gi|297847268|ref|XP_002891515.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337357|gb|EFH67774.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 372
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 29 SKAQAKAKAKG----KTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGM 84
+K++ K K KG K S++P EL F + R+E +++ K+IK NN ++P
Sbjct: 238 AKSEEKPKKKGGGFTKVCSLSP----ELQAFTGTAQLARTEVVRMLWKYIKENNLQDPSD 293
Query: 85 KKDLLGEEKLKSLL 98
K+ ++ +E L+SL
Sbjct: 294 KRTIICDESLRSLF 307
>gi|389688616|ref|ZP_10178283.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590575|gb|EIM30858.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 103
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 34/55 (61%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
R E I ++IK + +NP K++++ ++KL+++ GK+++ + E+ K L+
Sbjct: 48 RPEAVSKIWEYIKTHKLQNPQNKREIMADQKLQAVFGGKNKVSMFEMNKYLAQHL 102
>gi|62184807|ref|YP_219592.1| hypothetical protein CAB162 [Chlamydophila abortus S26/3]
gi|329942483|ref|ZP_08291293.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|332287120|ref|YP_004422021.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 6BC]
gi|384450266|ref|YP_005662866.1| hypothetical protein G5O_0190 [Chlamydophila psittaci 6BC]
gi|384451271|ref|YP_005663869.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 01DC11]
gi|384452247|ref|YP_005664844.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 08DC60]
gi|384453221|ref|YP_005665817.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci C19/98]
gi|384454199|ref|YP_005666794.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 02DC15]
gi|392376373|ref|YP_004064151.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|406591985|ref|YP_006739165.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci CP3]
gi|406593096|ref|YP_006740275.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci NJ1]
gi|406594712|ref|YP_006741317.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci MN]
gi|407453655|ref|YP_006732763.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci 84/55]
gi|407454987|ref|YP_006733878.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci GR9]
gi|407456356|ref|YP_006734929.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci VS225]
gi|407457720|ref|YP_006736025.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci WS/RT/E30]
gi|407458967|ref|YP_006737070.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci M56]
gi|407460337|ref|YP_006738112.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci WC]
gi|410858150|ref|YP_006974090.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449070814|ref|YP_007437894.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
gi|62147874|emb|CAH63620.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
gi|313847716|emb|CBY16706.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325507161|gb|ADZ18799.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 6BC]
gi|328815393|gb|EGF85381.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|328914360|gb|AEB55193.1| BAF60b domain protein [Chlamydophila psittaci 6BC]
gi|334692002|gb|AEG85221.1| SWIB/MDM2 domain protein [Chlamydophila psittaci C19/98]
gi|334692981|gb|AEG86199.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 01DC11]
gi|334693956|gb|AEG87173.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 02DC15]
gi|334694936|gb|AEG88152.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 08DC60]
gi|405780414|gb|AFS19164.1| SWIB/MDM2 domain protein [Chlamydia psittaci 84/55]
gi|405781530|gb|AFS20279.1| SWIB/MDM2 domain protein [Chlamydia psittaci GR9]
gi|405783144|gb|AFS21892.1| SWIB/MDM2 domain protein [Chlamydia psittaci MN]
gi|405783617|gb|AFS22364.1| SWIB/MDM2 domain protein [Chlamydia psittaci VS225]
gi|405785392|gb|AFS24138.1| SWIB/MDM2 domain protein [Chlamydia psittaci WS/RT/E30]
gi|405785615|gb|AFS24360.1| SWIB/MDM2 domain protein [Chlamydia psittaci M56]
gi|405787199|gb|AFS25943.1| SWIB/MDM2 domain protein [Chlamydia psittaci WC]
gi|405787857|gb|AFS26600.1| SWIB/MDM2 domain protein [Chlamydia psittaci CP3]
gi|405788968|gb|AFS27710.1| SWIB/MDM2 domain protein [Chlamydia psittaci NJ1]
gi|410811045|emb|CCO01688.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449039322|gb|AGE74746.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
Length = 87
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR+E K + +IK N ++P K+++L +E L + K+ I + ++ K LS VK
Sbjct: 30 PRTEIVKKVWDYIKKRNLQDPKNKRNILPDEALAKVFGSKNPIDMFQMTKALSSHIVK 87
>gi|226228476|ref|YP_002762582.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
gi|226091667|dbj|BAH40112.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
Length = 140
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K++ PSS +L + PR+E K + +IK NN ++ K+++ ++KLK + GK
Sbjct: 66 KALTPSS--DLAAIVGDKPLPRTEVVKKLWAYIKKNNLQDKTNKRNINADDKLKVVFGGK 123
Query: 102 DRIGIPEIAKLLSGQF 117
+ + ++ KL+S
Sbjct: 124 KTVSMFDMTKLVSAHL 139
>gi|170739254|ref|YP_001767909.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. 4-46]
gi|168193528|gb|ACA15475.1| SWIB/MDM2 domain protein [Methylobacterium sp. 4-46]
Length = 120
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K + PS ELG + PR E + +I+ ++ +NP K+++L ++KLK + GK
Sbjct: 47 KPLQPSP--ELGAIVGTKPIPRGEVVSKVWDYIRTHSLQNPENKREILADDKLKKVF-GK 103
Query: 102 DRIGIPEIAKLLSGQF 117
D+ + E+ K L+
Sbjct: 104 DKATMFEMNKYLAQHL 119
>gi|237746899|ref|ZP_04577379.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378250|gb|EEO28341.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 116
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I +IK NN ++ ++ + + KL+ + GK ++ + E+ KL+S Q
Sbjct: 60 PRTEVTKKIWDYIKQNNLQDKDNRRMINADGKLQPVFGGKKQVSMFEMTKLVSAQL 115
>gi|224081550|ref|XP_002306454.1| predicted protein [Populus trichocarpa]
gi|222855903|gb|EEE93450.1| predicted protein [Populus trichocarpa]
Length = 313
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 20 LKLQAAASSSKAQAKAKAKGKTKSVAPSSTSE-LGRFLNIPEPP--RSETAKLITKFIKL 76
L ++ S+K + K K G + +AP S+ L +FL E RS+ K + ++IK
Sbjct: 215 LYVKYGNESNKKEKKQKG-GNSGFLAPLQLSDALKKFLGTGESTLSRSDVVKRMWEYIKQ 273
Query: 77 NNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
NN ++P K+ +L + KLK L G + KLLS F
Sbjct: 274 NNLQDPSDKRRILCDVKLKELFDIDSFTGFT-VPKLLSAHF 313
>gi|297819474|ref|XP_002877620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323458|gb|EFH53879.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 16 GAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIK 75
G L +A +++ A +G+ + P S S L RF+ E S + + ++
Sbjct: 10 GCRTLMAKAVTNATATGAGFDPRGEIHKIFPVSES-LARFVGQSEISFSTAMEKVEQYTD 68
Query: 76 LNNRENPGMKKDLLGEEKLKSLLSGKDR-IGIPEIAKLLSGQF 117
++ NP +++L ++ LK++ GK++ +G+ E+ +LL F
Sbjct: 69 DHDLWNPENIEEILCDDNLKTIFDGKEKVVGVREMTELLLRHF 111
>gi|15236880|ref|NP_194411.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|186513923|ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|4455204|emb|CAB36527.1| putative protein [Arabidopsis thaliana]
gi|7269533|emb|CAB79536.1| putative protein [Arabidopsis thaliana]
gi|38566544|gb|AAR24162.1| At4g26810 [Arabidopsis thaliana]
gi|40823827|gb|AAR92306.1| At4g26810 [Arabidopsis thaliana]
gi|332659855|gb|AEE85255.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|332659856|gb|AEE85256.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 106
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V S S LG F+ + +IK NN ++P K ++ +EKLKS+L GK R
Sbjct: 34 VGQSQISRLGCFMRV------------WSYIKTNNLQDPKNKNVVICDEKLKSILLGKQR 81
Query: 104 IGIPEIAKLLSGQFVK 119
+ + ++ L+ F K
Sbjct: 82 VELVDLPSLIKLHFPK 97
>gi|240142382|ref|YP_002966892.1| hypothetical protein MexAM1_META2p0707 [Methylobacterium extorquens
AM1]
gi|418059176|ref|ZP_12697132.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|240012326|gb|ACS43551.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|373567298|gb|EHP93271.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 100
Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 32 QAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGE 91
+A AK G + + PS+ EL + PR E + + IK NN +NP K++++ +
Sbjct: 16 EAGAKPNGLQQPLKPSA--ELAAIVGDKPLPRGEVVSKVWEHIKKNNLQNPQNKREIVAD 73
Query: 92 EKLKSLLSGKDRIGIPEIAKLLSGQF 117
EKLK + G D+ + E+ K L+
Sbjct: 74 EKLKKVF-GVDKCSMFEMNKHLAKHL 98
>gi|46204853|ref|ZP_00049390.2| COG5531: SWIB-domain-containing proteins implicated in chromatin
remodeling [Magnetospirillum magnetotacticum MS-1]
Length = 106
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR E + + IK +N +NP K++++ ++KLK + GKD+ + E+ K L+
Sbjct: 50 PRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIF-GKDKCSMFEMNKHLAAHL 104
>gi|445499271|ref|ZP_21466126.1| SWIB/MDM2 domain containing protein [Janthinobacterium sp. HH01]
gi|444789266|gb|ELX10814.1| SWIB/MDM2 domain containing protein [Janthinobacterium sp. HH01]
Length = 130
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K++ PS+T L + PR+E K + +IK + ++P ++ + ++KLK++ GK
Sbjct: 56 KAMTPSAT--LAAVVGATPLPRTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFGGK 113
Query: 102 DRIGIPEIAKLLSGQF 117
++ + E+ KL+S
Sbjct: 114 AQVSMFEMTKLISDHL 129
>gi|452752127|ref|ZP_21951871.1| SWIB-domain-containing protein [alpha proteobacterium JLT2015]
gi|451960647|gb|EMD83059.1| SWIB-domain-containing protein [alpha proteobacterium JLT2015]
Length = 85
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
R+E + +IK N+ +NP K++++ + KLK + GKD++ + E+ KL+S K
Sbjct: 29 RAEVVSGMWDYIKRNDLQNPENKREIMADAKLKPIF-GKDKVTMFEMNKLISPHLSK 84
>gi|163854990|ref|YP_001629288.1| hypothetical protein Bpet0685 [Bordetella petrii DSM 12804]
gi|293603432|ref|ZP_06685857.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|311103989|ref|YP_003976842.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans A8]
gi|421485314|ref|ZP_15932873.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii HLE]
gi|422322600|ref|ZP_16403640.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|423015696|ref|ZP_17006417.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|163258718|emb|CAP41017.1| conserved hypothetical protein [Bordetella petrii]
gi|292818134|gb|EFF77190.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|310758678|gb|ADP14127.1| SWIB/MDM2 domain protein [Achromobacter xylosoxidans A8]
gi|317402438|gb|EFV83007.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|338781199|gb|EGP45592.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|400196233|gb|EJO29210.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii HLE]
Length = 92
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 25 AASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGM 84
A +S A A+ K + PS+ EL + PR+E K I ++IK +N ++
Sbjct: 2 ATTSKPATARKPNAAFMKPLTPSA--ELAAVIGSEAVPRTEVTKKIWEYIKKHNLQDASN 59
Query: 85 KKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
K+++ + KL+ + GKD++ + E+ KL++
Sbjct: 60 KRNINADAKLRPIF-GKDQVTMFELTKLVNAHL 91
>gi|343427276|emb|CBQ70804.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 260
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR K + +IK NN +N G K+ +L + KL S+ GK+ + E+AKL+ K
Sbjct: 200 PRHAVVKQLWAYIKSNNLQNEGNKRQILCDAKLTSIF-GKEAVDSFEMAKLIGAHLTK 256
>gi|241948081|ref|XP_002416763.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
gi|223640101|emb|CAX44347.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
Length = 254
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 3 ARGGGKAAMAAMKGAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPP 62
+R G + A + A K + S++K A A + +++P EL + + +
Sbjct: 98 SRFGKRTIRKATQAASKSKSSKSKSNTKRSAPNNAFNREMALSP----ELANVIGVDKCS 153
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
R + KL+ +IK +N +NP K+ + +EKL+ L K +G + K+LS K
Sbjct: 154 RPQVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLFKKKS-VGAFHMNKILSDHIFK 209
>gi|42522857|ref|NP_968237.1| hypothetical protein Bd1337 [Bdellovibrio bacteriovorus HD100]
gi|39574053|emb|CAE79230.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 140
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + +IK NN ++ K+++ + KLK + GK ++ + ++ KL+S
Sbjct: 84 PRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVFGGKTQVSMFDMTKLVSKHL 139
>gi|319764850|ref|YP_004128787.1| DNA topoisomerase iii [Alicycliphilus denitrificans BC]
gi|330827055|ref|YP_004390358.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
gi|317119411|gb|ADV01900.1| DNA topoisomerase III [Alicycliphilus denitrificans BC]
gi|329312427|gb|AEB86842.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
Length = 973
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
R E K + +IK +N ++P K+ ++ ++KL+++ GKD IG+ E+A +L
Sbjct: 919 RPEAVKKMWDYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSIGMFELAGVL 968
>gi|159488925|ref|XP_001702451.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
gi|158271119|gb|EDO96946.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
Length = 275
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
L FL + PR++ K + ++IK NN ++P K+ +L ++KLK+L +
Sbjct: 91 LQAFLGVESLPRTQVVKRLWEYIKANNLQDPKDKRKILLDDKLKTLFT 138
>gi|426403308|ref|YP_007022279.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859976|gb|AFY01012.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 139
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + +IK NN ++ K+++ + KLK + GK ++ + ++ KL+S
Sbjct: 83 PRTEVVKKLWAYIKKNNLQDAKNKRNINADAKLKEVFGGKTQVSMFDMTKLVSKHL 138
>gi|307111870|gb|EFN60104.1| hypothetical protein CHLNCDRAFT_49597 [Chlorella variabilis]
Length = 453
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 51 ELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSG 100
E+ FL + PR++ K + ++IK + ++P K+ ++ ++KLK+L +G
Sbjct: 245 EMQDFLGVERLPRTQVVKRLWEYIKEHGLQDPKDKRTIIFDDKLKTLFTG 294
>gi|188582565|ref|YP_001926010.1| SWIB/MDM2 domain-containing protein [Methylobacterium populi BJ001]
gi|179346063|gb|ACB81475.1| SWIB/MDM2 domain protein [Methylobacterium populi BJ001]
Length = 110
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR E + + IK +N +NP K++++ ++KLK + GKD+ + E+ K L+
Sbjct: 54 PRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIF-GKDKCSMFEMNKHLAAHL 108
>gi|115488718|ref|NP_001066846.1| Os12g0507500 [Oryza sativa Japonica Group]
gi|113649353|dbj|BAF29865.1| Os12g0507500 [Oryza sativa Japonica Group]
Length = 55
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 80 ENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
++P KK ++ +EKLK + G+DR+G EI+ LL+ F K
Sbjct: 16 QDPNNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 55
>gi|237749053|ref|ZP_04579533.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229380415|gb|EEO30506.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 128
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + +IK N ++ ++ + ++KLK + GK ++ + E+ KL+S Q
Sbjct: 72 PRTEVTKKVWDYIKKYNLQDKDNRRMINADDKLKPVFGGKKQVSMFEMTKLVSAQL 127
>gi|444318920|ref|XP_004180117.1| hypothetical protein TBLA_0D00900 [Tetrapisispora blattae CBS 6284]
gi|387513159|emb|CCH60598.1| hypothetical protein TBLA_0D00900 [Tetrapisispora blattae CBS 6284]
Length = 274
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 29 SKAQAKAKAKGK--TKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKK 86
SK KAK TK V S EL L E PR E K + K+IK NN ++P K+
Sbjct: 100 SKETPKAKVANNLSTKYVVLSK--ELSHLLGENELPRLEITKELWKYIKNNNLQDPANKQ 157
Query: 87 DLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFV 118
++ ++ LK + D + +I K+L+ +
Sbjct: 158 RIISDKMLKPIFG--DNFHMLDIGKVLNNHII 187
>gi|225460865|ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis
vinifera]
gi|297737490|emb|CBI26691.3| unnamed protein product [Vitis vinifera]
Length = 100
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V S S LG F+ + +IK NN ++P K ++ ++KL+S+L GK R
Sbjct: 34 VGQSQISRLGCFMRV------------WSYIKANNLQDPNNKNVVICDDKLRSILLGKPR 81
Query: 104 IGIPEIAKLLSGQFVK 119
+ + E+ L+ F K
Sbjct: 82 VELAELPALIKLHFPK 97
>gi|391231698|ref|ZP_10267904.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
gi|391221359|gb|EIP99779.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
Length = 91
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK N ++P K + + LK++ +GK + + E+ KL+SG
Sbjct: 34 PRTELTKKLWEYIKKNKLQDPKEKTKINADAALKAVFNGKKTVTMFEMTKLVSGHL 89
>gi|403412492|emb|CCL99192.1| predicted protein [Fibroporia radiculosa]
Length = 333
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 56 LNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
LN+ + R + K + +IK N +NP KK++L ++KLK+L + DRI + + K+L
Sbjct: 275 LNVEKLSRPQVVKQLWDYIKGNGLQNPAAKKEILCDDKLKALFNV-DRIDMFRMNKVL 331
>gi|226506384|ref|NP_001148210.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|195616714|gb|ACG30187.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 329
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
RS+ K + +IK NN ++P ++ ++ +EKLK L + G ++KLL+ F KT
Sbjct: 272 RSDVVKKMWDYIKGNNLQDPSDRRKIICDEKLKDLFGVETFTGFT-VSKLLAPHFTKT 328
>gi|217074210|gb|ACJ85465.1| unknown [Medicago truncatula]
Length = 320
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VAPSSTSE-LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSL 97
+AP S+ L +FL E RS+ K + +IK NN ++P K+ +L +EKLK L
Sbjct: 266 IAPLQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSDKRQILCDEKLKEL 320
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 47 SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGI 106
S + +L F+ PE R+E K + +I+ + ++P +++++ +E L++L G D I +
Sbjct: 137 SLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRALF-GVDTINM 195
Query: 107 PEIAKLLSGQFVKTGSG 123
++ K+L+ S
Sbjct: 196 FQMNKVLAKHIWPLDSD 212
>gi|406910432|gb|EKD50456.1| hypothetical protein ACD_62C00538G0002 [uncultured bacterium]
Length = 85
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK N ++ K+++ ++KLK + GK ++ + E+ KL+S
Sbjct: 29 PRTEVVKKLWEYIKKNKLQDAKNKRNINADDKLKLVFDGKKQVNMFEMTKLVSKHL 84
>gi|323336060|gb|EGA77334.1| Tri1p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 34/51 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKD 102
L +FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K+
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFWQKN 180
>gi|33593966|ref|NP_881610.1| hypothetical protein BP3037 [Bordetella pertussis Tohama I]
gi|33603185|ref|NP_890745.1| hypothetical protein BB4210 [Bordetella bronchiseptica RB50]
gi|384205270|ref|YP_005591009.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|408416929|ref|YP_006627636.1| hypothetical protein BN118_3157 [Bordetella pertussis 18323]
gi|410421667|ref|YP_006902116.1| hypothetical protein BN115_3892 [Bordetella bronchiseptica MO149]
gi|410471648|ref|YP_006894929.1| hypothetical protein BN117_0920 [Bordetella parapertussis Bpp5]
gi|412341485|ref|YP_006970240.1| hypothetical protein BN112_4205 [Bordetella bronchiseptica 253]
gi|427816195|ref|ZP_18983259.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427818864|ref|ZP_18985927.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427825292|ref|ZP_18992354.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33564040|emb|CAE43306.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33568816|emb|CAE34574.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332383384|gb|AEE68231.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|401779099|emb|CCJ64582.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408441758|emb|CCJ48253.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408448962|emb|CCJ60648.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408771319|emb|CCJ56119.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410567195|emb|CCN24766.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410569864|emb|CCN17985.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410590557|emb|CCN05648.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 92
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I +IK +N ++ K+++ + KL+ + GKD++ + E+ KL++
Sbjct: 37 PRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIF-GKDQVTMFELTKLVNAHL 91
>gi|389694036|ref|ZP_10182130.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388587422|gb|EIM27715.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 102
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR E I +IK NN +NP K+++L ++KL+ + GK ++ + E+ K L+
Sbjct: 47 PRGEVVSKIWDYIKKNNLQNPENKREILADDKLQPIF-GKPKVTMFEMNKHLAQHL 101
>gi|255730345|ref|XP_002550097.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132054|gb|EER31612.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 230
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 29 SKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDL 88
++AQ + ++P TS +G + + R + KL+ +IK NN +NP K+ +
Sbjct: 102 TEAQIANNPFNREMYLSPDLTSVIG----VEKTSRPKVVKLLWSYIKDNNLQNPNDKRQI 157
Query: 89 LGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
+EKL + K +G E+ KLLS K
Sbjct: 158 ECDEKLYRVFKKKS-VGAFEMNKLLSNHIFK 187
>gi|365758907|gb|EHN00728.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 227
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L FL E PR++ K+I ++IK +N +NP +++++ ++K++ + K + + + K
Sbjct: 130 LREFLGTEELPRTQVVKMIWQYIKEHNLQNPNDRREIICDKKMEPIFGKK--MTMFSMNK 187
Query: 112 LLSGQFVKTGS 122
LL+ T
Sbjct: 188 LLTKHLFNTNE 198
>gi|414873009|tpg|DAA51566.1| TPA: hypothetical protein ZEAMMB73_058775 [Zea mays]
Length = 61
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
RS+ K + +IK NN ++P ++ ++ +EKLK L + G ++KLL+ F KT
Sbjct: 4 RSDVVKKMWDYIKGNNLQDPSDRRKIICDEKLKDLFGVETFTGFT-VSKLLAPHFTKT 60
>gi|373854316|ref|ZP_09597114.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
gi|372472183|gb|EHP32195.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
Length = 77
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK N ++P K + + LK++ +GK + + E+ KL+SG
Sbjct: 20 PRTELTKKLWEYIKKNKLQDPKEKTKINADAALKAVFNGKKTVTMFEMTKLVSGHL 75
>gi|374288756|ref|YP_005035841.1| putative histone protein [Bacteriovorax marinus SJ]
gi|301167297|emb|CBW26879.1| putative histone protein [Bacteriovorax marinus SJ]
Length = 235
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
PR+E K + +IK NN +NP K+++L ++ LK + GK + + E+A +L
Sbjct: 180 PRTEAVKKMWDYIKKNNLQNPKNKRNILADDLLKKVF-GKKEVTMFELAGIL 230
>gi|238879408|gb|EEQ43046.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 172
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 51 ELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIA 110
EL + + + R + KL+ +IK +N +NP K+ + +EKL+ L K+ +G +
Sbjct: 62 ELTNVIGVDKCSRPQVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLFKKKN-VGAFHMN 120
Query: 111 KLLSGQFVK 119
K+LS K
Sbjct: 121 KILSDHIFK 129
>gi|217977994|ref|YP_002362141.1| SWIB/MDM2 domain-containing protein [Methylocella silvestris BL2]
gi|217503370|gb|ACK50779.1| SWIB/MDM2 domain protein [Methylocella silvestris BL2]
Length = 108
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E + ++IK + +N K+++L ++KLK++ G+D++ + E+ K L+
Sbjct: 53 PRTEVVSKVWEYIKKHKLQNEANKREILADDKLKAVF-GRDKVTMFEMNKYLAQHL 107
>gi|395325141|gb|EJF57568.1| SWIB-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 255
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L L++ + R +T K + +IK NN +NP KK+++ +++ +++ DRI + ++ K
Sbjct: 183 LAALLSVDKLSRPQTVKQLWTYIKANNMQNPENKKEIICDDRFRAIFKC-DRIDMFKMNK 241
Query: 112 LLSGQFV 118
L GQ +
Sbjct: 242 EL-GQHL 247
>gi|392576961|gb|EIW70091.1| hypothetical protein TREMEDRAFT_38764 [Tremella mesenterica DSM
1558]
Length = 316
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L F+ P R +T K I ++K N+ ++ G K+ +L +++LKS+ DR+ + + K
Sbjct: 199 LAAFIGEPSLSRPQTVKRIWDYVKENDLQDQGDKRYILCDDRLKSVFHT-DRLHMFTMNK 257
Query: 112 LLSGQF 117
LL F
Sbjct: 258 LLVPHF 263
>gi|329901025|ref|ZP_08272670.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
gi|327549272|gb|EGF33848.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
Length = 124
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK N ++ K+ + G+ KL ++ GK ++ + E+ KL+S
Sbjct: 68 PRTEVTKKVWEYIKKNALQDDANKRMINGDAKLVAIFGGKKQVSMFEMTKLISDHL 123
>gi|224136902|ref|XP_002322444.1| predicted protein [Populus trichocarpa]
gi|222869440|gb|EEF06571.1| predicted protein [Populus trichocarpa]
Length = 100
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V S S LG F+ + +IK NN ++P K + +EKLKS+L GK +
Sbjct: 34 VGQSQISHLGCFMRV------------WSYIKTNNLQDPNNKNVVNCDEKLKSILLGKQQ 81
Query: 104 IGIPEIAKLLSGQFVK 119
+ + E+ L+ F K
Sbjct: 82 VELVELPALIKLHFPK 97
>gi|449457359|ref|XP_004146416.1| PREDICTED: protein TRI1-like [Cucumis sativus]
Length = 127
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V S S LG F K + +IK NN ++P K ++ +EKLKS+L GK +
Sbjct: 34 VGHSQISRLGCF------------KCVWSYIKTNNLQDPTNKNVVICDEKLKSILLGKPK 81
Query: 104 IGIPEIAKLLSGQFVKTG 121
+ E+A+L + V+
Sbjct: 82 V---ELAELPTTTLVRCD 96
>gi|33598274|ref|NP_885917.1| hypothetical protein BPP3764 [Bordetella parapertussis 12822]
gi|33566832|emb|CAE39047.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 92
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I +IK +N ++ K+++ + KL+ + GKD++ + E+ KL++
Sbjct: 37 PRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIF-GKDQVMMFELTKLVNAHL 91
>gi|108711237|gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|218193805|gb|EEC76232.1| hypothetical protein OsI_13647 [Oryza sativa Indica Group]
gi|222625850|gb|EEE59982.1| hypothetical protein OsJ_12695 [Oryza sativa Japonica Group]
Length = 334
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
RS+ K + +IK N ++P ++ ++ +EKLK LL + G ++KLL+ F KT
Sbjct: 277 RSDVVKRMWDYIKENKLQDPSDRRKIICDEKLKDLLQVESFNGFT-VSKLLAPHFTKT 333
>gi|168008958|ref|XP_001757173.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691671|gb|EDQ78032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 76 LNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
L+ +NP K+++ EKLK +L KD++G EIA LLS F
Sbjct: 1 LSFVQNPLNKQEVFYGEKLKPVLGDKDKVGFLEIAMLLSKHF 42
>gi|348589734|ref|YP_004874196.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|347973638|gb|AEP36173.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|399116484|emb|CCG19290.1| conserved hypothetical protein [Taylorella asinigenitalis 14/45]
Length = 97
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK + ++ ++++ ++KL+ + GKD++ + E+ KL+S
Sbjct: 42 PRTEVTKKVWEYIKSKDLQDSANRRNINADDKLRPIF-GKDQVNMFEMTKLISAHL 96
>gi|255561659|ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
gi|223538877|gb|EEF40475.1| brg-1 associated factor, putative [Ricinus communis]
Length = 614
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 60 EPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
E R++ K I +IK N+ ++P K+ +L ++KLK L G ++KLL+ F+K
Sbjct: 553 ELSRADVVKRIWGYIKQNDLQDPSDKRRILCDDKLKELFEVDSFNGFS-VSKLLTAHFIK 611
>gi|401626231|gb|EJS44187.1| YMR233W [Saccharomyces arboricola H-6]
Length = 226
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K
Sbjct: 130 LQAFLGAEELPRTQVVKMIWQYIKEHDLQNPSDRREILCDEKMEPIFGKK 179
>gi|296137220|ref|YP_003644462.1| SWIB/MDM2 domain-containing protein [Thiomonas intermedia K12]
gi|410695094|ref|YP_003625716.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|294341519|emb|CAZ89936.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|295797342|gb|ADG32132.1| SWIB/MDM2 domain protein [Thiomonas intermedia K12]
Length = 99
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK +N ++ K+ + + KLK + GKD++ + E+ KL+S
Sbjct: 44 PRTEVVKKLWEYIKKHNLQDAANKRMINADAKLKPIF-GKDQVSMFEMTKLVSAHL 98
>gi|449542129|gb|EMD33109.1| hypothetical protein CERSUDRAFT_142690 [Ceriporiopsis subvermispora
B]
Length = 281
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L L + + R + K + +IK N +NP KK+++ ++ L+++ G DRI + ++ K
Sbjct: 202 LAAVLKVEKLSRPQVVKQLWVYIKDRNLQNPANKKEIMCDDSLRAIF-GTDRIDMFKMNK 260
Query: 112 LLSGQFVKTGS 122
+L G + S
Sbjct: 261 VLGGHLHQPDS 271
>gi|323451768|gb|EGB07644.1| hypothetical protein AURANDRAFT_64768 [Aureococcus anophagefferens]
Length = 343
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 46 PSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIG 105
P + E+ + + KL+ K+IK ++ +NP K +++ ++ LK++ KD++
Sbjct: 155 PVLSDEMAAVVGVGRANHFRLVKLLWKYIKKHDLQNPANKNEIVCDDALKAVFK-KDKVT 213
Query: 106 IPEIAKLLSGQFVKTGS 122
++KLLS + K +
Sbjct: 214 SFGMSKLLSAHYFKDDA 230
>gi|320581209|gb|EFW95430.1| RNA polymerase I transcription factor subunit, putative [Ogataea
parapolymorpha DL-1]
Length = 205
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 41 TKSVAPSSTSELGRFLNIPEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLS 99
T+ V PS L +FL EP R++ K I +++K N +NP ++++L ++KL+ +
Sbjct: 121 TRGVLPSEA--LAQFLGSSEPIARTQVVKKIWEYVKANELQNPNDRREILCDDKLRPVFG 178
Query: 100 GKDRIGIPEIAKLL 113
D++ + + K+L
Sbjct: 179 --DKVNMFTMNKVL 190
>gi|91107221|gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
Length = 100
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 47 SSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGI 106
S TS LG F K + +IK NN ++P K + +EKLKS+L GK ++ +
Sbjct: 37 SQTSRLGCF------------KRVWSYIKENNLQDPNNKNLVNCDEKLKSVLLGKPQVEL 84
Query: 107 PEIAKLLSGQFVK 119
E+ L+ F K
Sbjct: 85 TELPTLIKLHFPK 97
>gi|156841806|ref|XP_001644274.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
gi|156114913|gb|EDO16416.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 152
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGE 91
+ EL FL + R++ K + ++IKLNN +NP ++++L +
Sbjct: 47 SDELQDFLKVESVTRTQAVKRVWEYIKLNNLQNPNDRREILCD 89
>gi|427400619|ref|ZP_18891857.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
gi|425720444|gb|EKU83366.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
Length = 126
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K++ PS+T L + PR+E K + +IK + ++ ++ + ++KLK++ GK
Sbjct: 52 KAMTPSAT--LAAVVGDKPLPRTEVTKKVWDYIKSKDLQDAANRRMINADDKLKAVFGGK 109
Query: 102 DRIGIPEIAKLLSGQF 117
++ + E+ KL+S
Sbjct: 110 AQVSMFEMTKLISDHL 125
>gi|323307663|gb|EGA60928.1| Tri1p [Saccharomyces cerevisiae FostersO]
Length = 226
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L +FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK 179
>gi|359796570|ref|ZP_09299167.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
gi|359365533|gb|EHK67233.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
Length = 92
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 25 AASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGM 84
A +S A A+ K + PS+ EL + PR+E K I ++IK +N ++
Sbjct: 2 ATTSKPATARKPNAAFMKPLTPSA--ELAAVIGSEAVPRTEVTKKIWEYIKKHNLQDASN 59
Query: 85 KKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
K+++ + KL + GKD++ + E+ KL++
Sbjct: 60 KRNINADAKLLPIF-GKDQVTMFELTKLVNAHL 91
>gi|388505468|gb|AFK40800.1| unknown [Medicago truncatula]
Length = 100
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 46 PSSTSELGRFLNIPEPPR-----SETAKL-----ITKFIKLNNRENPGMKKDLLGEEKLK 95
P + L +N+P R S+T++L + +IK NN ++P K + +EKLK
Sbjct: 14 PKKLANLIDLVNLPSTLRDFVGQSQTSRLSCFMRVWSYIKTNNLQDPNNKNVVNCDEKLK 73
Query: 96 SLLSGKDRIGIPEIAKLLSGQFVK 119
+L GK ++ + E+ L+ F K
Sbjct: 74 GILLGKPQVDLAELPALIKLHFPK 97
>gi|319779180|ref|YP_004130093.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|397661420|ref|YP_006502120.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC 35865]
gi|317109204|gb|ADU91950.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|394349599|gb|AFN35513.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC 35865]
gi|399114652|emb|CCG17447.1| conserved hypothetical protein [Taylorella equigenitalis 14/56]
Length = 97
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + ++IK + ++ ++++ ++KL+ + GKD++ + E+ KL+S
Sbjct: 42 PRTEVTKKVWEYIKSKDLQDANNRRNINADDKLRPIF-GKDQVNMFEMTKLISAHL 96
>gi|224588358|gb|ACN58982.1| SWIB complex BAF60b [uncultured bacterium BLR19]
Length = 133
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K++ PS+T L + PR++ K I +IK N ++ K+ + + KLK L GK
Sbjct: 59 KALTPSAT--LADVIGGSPVPRTQVIKKIWDYIKKNGLQDKTNKRMINADAKLKVLFDGK 116
Query: 102 DRIGIPEIAKLLS 114
++I + ++AK++S
Sbjct: 117 NQISMFDLAKIVS 129
>gi|171056886|ref|YP_001789235.1| SWIB/MDM2 domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774331|gb|ACB32470.1| SWIB/MDM2 domain protein [Leptothrix cholodnii SP-6]
Length = 133
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 57 NIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQ 116
N P P R+E K + ++IK + ++ K+ + + KLK++ KD++ + E+ KL+S Q
Sbjct: 74 NTPAP-RTEVTKKVWEYIKKHQLQDAANKRMINADAKLKAIF-KKDQVSMFEMTKLISDQ 131
Query: 117 F 117
Sbjct: 132 L 132
>gi|395009905|ref|ZP_10393351.1| SWIB domain-containing protein possibly involved in chromatin
remodeling, partial [Acidovorax sp. CF316]
gi|394312030|gb|EJE49281.1| SWIB domain-containing protein possibly involved in chromatin
remodeling, partial [Acidovorax sp. CF316]
Length = 59
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
R E K + ++IK NN ++P K+ ++ ++KL+++ GKD G+ E+A +L
Sbjct: 5 RPEAVKKLWEYIKANNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAGIL 54
>gi|323303447|gb|EGA57242.1| Tri1p [Saccharomyces cerevisiae FostersB]
Length = 226
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L +FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK 179
>gi|323353173|gb|EGA85473.1| Tri1p [Saccharomyces cerevisiae VL3]
Length = 217
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L +FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K
Sbjct: 121 LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK 170
>gi|349580524|dbj|GAA25684.1| K7_Ymr233wp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 223
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L +FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK 179
>gi|433460808|ref|ZP_20418431.1| glmZ(sRNA)-inactivating NTPase [Halobacillus sp. BAB-2008]
gi|432190996|gb|ELK47981.1| glmZ(sRNA)-inactivating NTPase [Halobacillus sp. BAB-2008]
Length = 292
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 39 GKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKL-----NNRENPGMKKDLLGEEK 93
G K+VA S +LG F PP L+ KF++L NN +N + DL G E
Sbjct: 16 GAGKTVAVQSFEDLGFFCVDNLPP-----ALLPKFLELMKDSSNNIQNVALVMDLRGREF 70
Query: 94 LKSLLSGKDRIG 105
SL DR+G
Sbjct: 71 FDSLFDSLDRLG 82
>gi|6323889|ref|NP_013960.1| Tri1p [Saccharomyces cerevisiae S288c]
gi|2497196|sp|Q05024.1|TRI1_YEAST RecName: Full=Protein TRI1
gi|887614|emb|CAA90204.1| unknown [Saccharomyces cerevisiae]
gi|45269842|gb|AAS56301.1| YMR233W [Saccharomyces cerevisiae]
gi|151945938|gb|EDN64170.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408460|gb|EDV11725.1| hypothetical protein SCRG_02128 [Saccharomyces cerevisiae RM11-1a]
gi|207342139|gb|EDZ69997.1| YMR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271577|gb|EEU06619.1| Tri1p [Saccharomyces cerevisiae JAY291]
gi|259148819|emb|CAY82064.1| Tri1p [Saccharomyces cerevisiae EC1118]
gi|285814238|tpg|DAA10133.1| TPA: Tri1p [Saccharomyces cerevisiae S288c]
gi|323332147|gb|EGA73558.1| Tri1p [Saccharomyces cerevisiae AWRI796]
gi|323347044|gb|EGA81320.1| Tri1p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297403|gb|EIW08503.1| Tri1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 226
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L +FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK 179
>gi|365763939|gb|EHN05465.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 226
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L +FL E PR++ K+I ++IK ++ +NP ++++L +EK++ + K
Sbjct: 130 LQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK 179
>gi|83314990|ref|XP_730600.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490371|gb|EAA22165.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 111
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 50 SELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLL 98
S L FLN R K K+IK NN ++P MK+ ++ ++KLK +L
Sbjct: 59 SPLKEFLNTDTASRVFVLKYAWKYIKDNNLQDPDMKRKIIPDQKLKQVL 107
>gi|442318654|ref|YP_007358675.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441486296|gb|AGC42991.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 105
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + +IK NN ++ K+ + ++KLK + GK + + E+ L++ Q
Sbjct: 49 PRTEVVKKLWAYIKKNNLQDAKNKRQINADDKLKPIFGGKKNVTMFEMTALVNKQL 104
>gi|241765352|ref|ZP_04763327.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
gi|241364917|gb|EER59860.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
Length = 969
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
R E K + ++IK +N ++P K+ ++ ++KL+++ GKD G+ E+A +L
Sbjct: 913 RPEAVKKLWEYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAGIL 962
>gi|413944917|gb|AFW77566.1| hypothetical protein ZEAMMB73_358962 [Zea mays]
Length = 169
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 80 ENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
+N K D+ + LKSL G+D++G+ EI+KLLS F K
Sbjct: 115 QNQAKKIDINCDATLKSLFGGRDKVGMLEISKLLSRDFPKI 155
>gi|323307329|gb|EGA60609.1| Uaf30p [Saccharomyces cerevisiae FostersO]
Length = 294
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 27 SSSKAQAKAKAKGKTKSVAPSSTSE------LGRFLNIPEPPRSETAKLITKFIKLNNRE 80
S +K K KG T S +P ST + L L E R+E + + +IK +N +
Sbjct: 100 SXTKGTHVEKKKG-TVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQ 116
NP KK++L +EKL+ L+ GK + E+ K+L+
Sbjct: 159 NPNNKKEILCDEKLE-LILGKS-TNMFEMHKILASH 192
>gi|182678258|ref|YP_001832404.1| SWIB/MDM2 domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634141|gb|ACB94915.1| SWIB/MDM2 domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 114
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E + ++IK + +N K+++L ++KLK + GKD+ + E+ K L+
Sbjct: 59 PRTEVVSKVWEYIKKHKLQNEANKREILADDKLKPIF-GKDKATMFEMNKFLAQHL 113
>gi|392954835|ref|ZP_10320386.1| DNA topoisomerase domain protein [Hydrocarboniphaga effusa AP103]
gi|391857492|gb|EIT68023.1| DNA topoisomerase domain protein [Hydrocarboniphaga effusa AP103]
Length = 98
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 39 GKTKSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLL 98
G +++V PS+ +L + R++ K + ++IK +N ++ ++ + + KLK +
Sbjct: 20 GISQTVTPSA--QLAEVVGSAPITRADLTKKVWEYIKKHNLQDATNRRAINADAKLKPIF 77
Query: 99 SGKDRIGIPEIAKLLSGQFVK 119
GKD++ + E+ KL++ K
Sbjct: 78 GGKDQVTMFEMTKLVNQHVSK 98
>gi|145510698|ref|XP_001441282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408521|emb|CAK73885.1| unnamed protein product [Paramecium tetraurelia]
Length = 411
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L + L I E RS+ +++KLNN + K ++ +E+LK L G++RI I +
Sbjct: 192 LQQLLGIKEGTRSQILYCFWEYVKLNNLTDKENKDQIIADEQLKQLF-GQERIPISNLNM 250
Query: 112 LL 113
LL
Sbjct: 251 LL 252
>gi|378706236|gb|AFC35037.1| hypothetical protein OtV6_129 [Ostreococcus tauri virus RT-2011]
Length = 132
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 1 MAARGGGKAAMAAMKGAGGLKLQAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIPE 60
+A R KA ++ ++ +KA+A + + + P +L FL +PE
Sbjct: 11 VALRADVKALTKLVRKVKNVQEDPNGEKAKARAANNGFNRKQEITP----KLREFLGLPE 66
Query: 61 ---PPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIP--EIAKLLSG 115
RSE K I K+I ++P + L+ ++KLK LL + + + K LS
Sbjct: 67 GELISRSEVTKFINKYITDKGLKHPENGRQLILDDKLKELLQPPADVTVTYLNLQKYLSP 126
Query: 116 QFVK 119
+VK
Sbjct: 127 HYVK 130
>gi|50304323|ref|XP_452111.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641243|emb|CAH02504.1| KLLA0B13024p [Kluyveromyces lactis]
Length = 124
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%)
Query: 51 ELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
EL FL + E PR++ K + +IK ++ +NP +++++ ++ +K + K
Sbjct: 40 ELQEFLKVEEMPRTQVVKSVWDYIKEHDLQNPEDRREIICDDAMKPIFGEK 90
>gi|330444183|ref|YP_004377169.1| hypothetical protein G5S_0481 [Chlamydophila pecorum E58]
gi|328807293|gb|AEB41466.1| BAF60b domain protein [Chlamydophila pecorum E58]
Length = 87
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR+E K + ++IK +N ++P K+++L + L + + I + ++ K +S VK
Sbjct: 30 PRTEIVKKVWEYIKKHNLQDPKNKRNILPDASLAKVFGTHNAIDMFQMTKAISAHIVK 87
>gi|406933255|gb|EKD67963.1| hypothetical protein ACD_48C00134G0001 [uncultured bacterium]
Length = 90
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
R + K + ++IK N +NP K++++ +E L L GK + + E+ KL+S
Sbjct: 30 RGQVMKKLWEYIKGKNLQNPSNKRNIIADELLLPLFGGKKEVTMFEMTKLVSAHL 84
>gi|448089569|ref|XP_004196842.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|448093864|ref|XP_004197873.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359378264|emb|CCE84523.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359379295|emb|CCE83492.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 42 KSVAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
K+V+P EL + + + R + K + +IK NN +NP K+ + +EKL++L K
Sbjct: 122 KNVSP----ELQAIIGVEKCSRPQIVKQLWAYIKDNNLQNPEDKRKINCDEKLQTLF-KK 176
Query: 102 DRIGIPEIAKLLSGQ 116
+G E+ KLLS
Sbjct: 177 QSVGAFEMNKLLSSH 191
>gi|338733782|ref|YP_004672255.1| hypothetical protein SNE_A18870 [Simkania negevensis Z]
gi|336483165|emb|CCB89764.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 76
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K + +IK N R++P K++++ +EKL + K I + ++ K ++
Sbjct: 20 PRTEVTKKLWAYIKKNKRQDPDNKRNIIPDEKLAKVFGSKKAINMFDMTKKVNKHL 75
>gi|390597337|gb|EIN06737.1| SWIB-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSG 100
L LN+ + R + K + ++I+ NN +NP K++++ +EKL+ + +
Sbjct: 226 LAAVLNVDKLSRPQVVKRMWEYIRENNLQNPNDKREIICDEKLQRIFNA 274
>gi|407941365|ref|YP_006857006.1| DNA topoisomerase III [Acidovorax sp. KKS102]
gi|407899159|gb|AFU48368.1| DNA topoisomerase III [Acidovorax sp. KKS102]
Length = 969
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLL 113
R E K + ++IK +N ++P K+ ++ ++KL+++ GKD G+ E+A +L
Sbjct: 913 RPEAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAGIL 962
>gi|351731621|ref|ZP_08949312.1| DNA topoisomerase III [Acidovorax radicis N35]
Length = 975
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQ 116
R E K + ++IK +N ++P K+ ++ ++KL+++ GKD G+ E+A +L
Sbjct: 918 RPEAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAGILGNH 970
>gi|223939102|ref|ZP_03630986.1| SWIB/MDM2 domain protein [bacterium Ellin514]
gi|223892262|gb|EEF58739.1| SWIB/MDM2 domain protein [bacterium Ellin514]
Length = 96
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PRSE K + +I+ + ++P K + +E LK + +GK ++ + E++KL+ V+
Sbjct: 38 PRSELTKRLWSYIRKHGLQDPKKKTLINADENLKPVFNGKQQVTMLEMSKLVFSHIVQ 95
>gi|398366129|ref|NP_014938.3| Uaf30p [Saccharomyces cerevisiae S288c]
gi|74645010|sp|Q08747.1|UAF30_YEAST RecName: Full=Upstream activation factor subunit UAF30; AltName:
Full=Upstream activation factor 30 KDa subunit;
Short=p30
gi|1420654|emb|CAA99523.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190407596|gb|EDV10863.1| hypothetical protein SCRG_01676 [Saccharomyces cerevisiae RM11-1a]
gi|256272579|gb|EEU07558.1| Uaf30p [Saccharomyces cerevisiae JAY291]
gi|259149770|emb|CAY86574.1| Uaf30p [Saccharomyces cerevisiae EC1118]
gi|285815167|tpg|DAA11060.1| TPA: Uaf30p [Saccharomyces cerevisiae S288c]
gi|392296622|gb|EIW07724.1| Uaf30p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 228
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 27 SSSKAQAKAKAKGKTKSVAPSSTSE------LGRFLNIPEPPRSETAKLITKFIKLNNRE 80
S +K K KG T S +P ST + L L E R+E + + +IK +N +
Sbjct: 100 SETKGTHVEKKKG-TVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
NP KK++L +EKL+ L+ GK + E+ K+L+
Sbjct: 159 NPNNKKEILCDEKLE-LILGKS-TNMFEMHKILASHM 193
>gi|323331595|gb|EGA73010.1| Uaf30p [Saccharomyces cerevisiae AWRI796]
Length = 211
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 27 SSSKAQAKAKAKGKTKSVAPSSTSE------LGRFLNIPEPPRSETAKLITKFIKLNNRE 80
S +K K KG T S +P ST + L L E R+E + + +IK +N +
Sbjct: 83 SETKGTHVEKKKG-TVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 141
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
NP KK++L +EKL+ L+ GK + E+ K+L+
Sbjct: 142 NPNNKKEILCDEKLE-LILGKS-TNMFEMHKILASHM 176
>gi|323352202|gb|EGA84739.1| Uaf30p [Saccharomyces cerevisiae VL3]
gi|365762956|gb|EHN04488.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 211
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 27 SSSKAQAKAKAKGKTKSVAPSSTSE------LGRFLNIPEPPRSETAKLITKFIKLNNRE 80
S +K K KG T S +P ST + L L E R+E + + +IK +N +
Sbjct: 83 SETKGTHVEKKKG-TVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 141
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
NP KK++L +EKL+ L+ GK + E+ K+L+
Sbjct: 142 NPNNKKEILCDEKLE-LILGKS-TNMFEMHKILASHM 176
>gi|187479362|ref|YP_787387.1| hypothetical protein BAV2891 [Bordetella avium 197N]
gi|115423949|emb|CAJ50501.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 92
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I +IK +N ++ K+++ + KL + GKD++ + E+ KL++
Sbjct: 37 PRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIF-GKDQVTMFELTKLVNAHL 91
>gi|388852014|emb|CCF54370.1| uncharacterized protein [Ustilago hordei]
Length = 262
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR K + +IK NN +N K+ +L + KL + GK+ + E+AKL+ K
Sbjct: 202 PRHAVVKQLWAYIKSNNLQNESNKRQILCDAKLTDIF-GKESVDSFEMAKLIGSHLTK 258
>gi|323302999|gb|EGA56803.1| Uaf30p [Saccharomyces cerevisiae FostersB]
Length = 228
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 27 SSSKAQAKAKAKGKTKSVAPSSTSE------LGRFLNIPEPPRSETAKLITKFIKLNNRE 80
S +K K KG T S +P ST + L L E R+E + + +IK +N +
Sbjct: 100 SXTKGTHVEKKKG-TVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
NP KK++L +EKL+ L+ GK + E+ K+L+
Sbjct: 159 NPNNKKEILCDEKLE-LILGKS-TNMFEMHKILASHM 193
>gi|196234314|ref|ZP_03133144.1| SWIB/MDM2 domain protein [Chthoniobacter flavus Ellin428]
gi|196221668|gb|EDY16208.1| SWIB/MDM2 domain protein [Chthoniobacter flavus Ellin428]
Length = 97
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR++ K + +IK N ++ K + ++ LK++ +GK + + E+ KL+SG K
Sbjct: 40 PRTDLTKKLWDYIKKNKLQDAKKKTQINADDALKAVFNGKKSVSMFEMTKLVSGHLTK 97
>gi|444916606|ref|ZP_21236719.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
gi|444711891|gb|ELW52824.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
Length = 115
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLS 114
PR+ I ++IK NN ++P K+ + ++KLK + GK + + E+ L++
Sbjct: 59 PRTAVVSKIWEYIKKNNLQDPKNKRQINADDKLKPIFGGKKSVTMFELTALVN 111
>gi|410076390|ref|XP_003955777.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
gi|372462360|emb|CCF56642.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
Length = 230
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 51 ELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
+L L E PR++ KL+ +IK NN +N ++++L ++K++ + K
Sbjct: 132 QLKELLGEDELPRTQVVKLVWDYIKSNNLQNEADRREILCDDKMRPIFGNK 182
>gi|452124017|ref|ZP_21936601.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|452127403|ref|ZP_21939984.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
gi|451923247|gb|EMD73388.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|451926683|gb|EMD76813.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
Length = 92
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PR+E K I +IK +N ++ K+++ + KL + GKD++ + E+ KL++
Sbjct: 37 PRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIF-GKDQVTMFELTKLVNAHL 91
>gi|406986559|gb|EKE07122.1| hypothetical protein ACD_18C00179G0006 [uncultured bacterium]
Length = 91
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PRS+ K + ++IK N +NP K+++ ++ L L GK + + E+ KL+S
Sbjct: 29 PRSQVVKKLWEYIKEKNLQNPANKRNIFADDLLMPLF-GKKEVTMFEMTKLVSPHI 83
>gi|302809001|ref|XP_002986194.1| hypothetical protein SELMODRAFT_123621 [Selaginella moellendorffii]
gi|300146053|gb|EFJ12725.1| hypothetical protein SELMODRAFT_123621 [Selaginella moellendorffii]
Length = 93
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
R E K + +IK N ++P ++ +L +EKL+ LL K G + KLL T
Sbjct: 34 RPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDCKSFNGFGGLPKLLQAHLTST 91
>gi|301632263|ref|XP_002945210.1| PREDICTED: DNA topoisomerase 3-like [Xenopus (Silurana) tropicalis]
Length = 873
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
R+E K + +IK + ++P K+ + ++KL+++ GKD G+ E++ LLS
Sbjct: 819 RTEAVKKLWDYIKTHKLQDPKDKRTIRADDKLRAVF-GKDSAGMFELSGLLSAHL 872
>gi|118576448|ref|YP_876191.1| ABC-type phosphate/phosphonate transport system, periplasmic
component [Cenarchaeum symbiosum A]
gi|118194969|gb|ABK77887.1| ABC-type phosphate/phosphonate transport system, periplasmic
component [Cenarchaeum symbiosum A]
Length = 347
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 5 GGGKAAMAAMKGAGGLKLQAAASSSKAQAKA---KAKGKTKSVAPSSTSELGRFLNIPEP 61
GG KAA+ + G K+ A S A AK + + + K+ A S F+ P+
Sbjct: 229 GGYKAALELLLGG---KVDVAFGSDIAPAKYLDEQDRARVKAAAISGAVPSHAFVVGPDV 285
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKL 94
SE L++ I+LN E + +DL G E L
Sbjct: 286 TESEEKALVSALIELNREEYNHILRDLYGAEAL 318
>gi|389743867|gb|EIM85051.1| SWIB-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 271
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L L + + R + K + +IK N+ +NP KK+++ +EK +++ + D+I + ++ K
Sbjct: 202 LQAVLQVDKMARPQVVKQLWVYIKANDMQNPANKKEIVCDEKFRAMFNV-DKIDMFKMNK 260
Query: 112 LLSGQF 117
+LS
Sbjct: 261 VLSEHL 266
>gi|151945377|gb|EDN63620.1| upstream activation factor subunit [Saccharomyces cerevisiae
YJM789]
gi|349581446|dbj|GAA26604.1| K7_Uaf30p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 228
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 27 SSSKAQAKAKAKGKTKSVAPSSTSE------LGRFLNIPEPPRSETAKLITKFIKLNNRE 80
S +K K KG T S +P ST + L L E R+E + + +IK +N +
Sbjct: 100 SETKGTRVEKKKG-TVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQ 158
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
NP KK++L +EKL+ L+ GK + E+ K+L+
Sbjct: 159 NPNNKKEILCDEKLE-LILGKS-TNMFEMHKILASHM 193
>gi|156847606|ref|XP_001646687.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
gi|156117366|gb|EDO18829.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
Length = 261
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGK 101
L FL E PR++ K + +IK ++ +NP ++++L +EK++ + K
Sbjct: 134 LQEFLGETELPRTQVVKKVWDYIKEHDLQNPDDRREILCDEKMQPIFGKK 183
>gi|302806513|ref|XP_002985006.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
gi|300147216|gb|EFJ13881.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
Length = 311
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 63 RSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
R E K + +IK N ++P ++ +L +EKL+ LL K G + KLL T
Sbjct: 252 RPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDCKSFNGFGGLPKLLQAHLTST 309
>gi|207340922|gb|EDZ69123.1| YOR295Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 228
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 27 SSSKAQAKAKAKGKTKSVAPSSTSE------LGRFLNIPEPPRSETAKLITKFIKLNNRE 80
S +K K KG T S +P ST + L L E R+E + + ++K +N +
Sbjct: 100 SETKGTHVEKKKG-TVSKSPISTRKVTLSKSLASLLGEHELTRTEVVRRLWAYVKAHNLQ 158
Query: 81 NPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
NP KK++L +EKL+ L+ GK + E+ K+L+
Sbjct: 159 NPNNKKEILCDEKLE-LILGKS-TNMFEMHKILASHM 193
>gi|50294301|ref|XP_449562.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528876|emb|CAG62538.1| unnamed protein product [Candida glabrata]
Length = 233
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPE 108
+ +L +FL E PR++ K + +IK +N ++P +++++ +++++ + D++ +
Sbjct: 142 SDDLYKFLGERELPRTQVVKQVWDYIKEHNLQSPEDRREIICDDRMRPIFG--DKMTMFA 199
Query: 109 IAKLLSGQFVK 119
+ K+LS K
Sbjct: 200 LNKILSKHLTK 210
>gi|452825650|gb|EME32645.1| hypothetical protein Gasu_00170 [Galdieria sulphuraria]
Length = 291
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 23 QAAASSSKAQAKAKAKGKTKSVAPSSTSELGRFLNIP--------------EPPRSETAK 68
+A ++ +++ K K + K +S+ +TS G L P RS+ K
Sbjct: 176 EALLAAEESKMKRKQQSKVQSLNKGTTSHRGESLQKPLKLSNLLSQICGAEYLSRSQVVK 235
Query: 69 LITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
+ ++IKL+N + K+++ + LK L GK+ I I+K LS K
Sbjct: 236 KVWEYIKLHNLQKASDKRNISCDALLKQLFDGKEEINSFHISKYLSPHLQK 286
>gi|406593941|ref|YP_006741120.1| DNA topoisomerase I [Chlamydia psittaci NJ1]
gi|405789813|gb|AFS28555.1| DNA topoisomerase I [Chlamydia psittaci NJ1]
Length = 862
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 800 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQHL 858
Query: 118 VKT 120
K+
Sbjct: 859 FKS 861
>gi|329943328|ref|ZP_08292102.1| DNA topoisomerase I [Chlamydophila psittaci Cal10]
gi|332287904|ref|YP_004422805.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 6BC]
gi|384451074|ref|YP_005663674.1| DNA topoisomerase I [Chlamydophila psittaci 6BC]
gi|384452059|ref|YP_005664657.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 01DC11]
gi|384453033|ref|YP_005665630.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 08DC60]
gi|384454991|ref|YP_005667586.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 02DC15]
gi|392377133|ref|YP_004064911.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila psittaci
RD1]
gi|407454570|ref|YP_006733678.1| DNA topoisomerase I [Chlamydia psittaci 84/55]
gi|407455831|ref|YP_006734722.1| DNA topoisomerase I [Chlamydia psittaci GR9]
gi|407457257|ref|YP_006735830.1| DNA topoisomerase I [Chlamydia psittaci VS225]
gi|313848476|emb|CBY17480.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila psittaci
RD1]
gi|325506763|gb|ADZ18401.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 6BC]
gi|328814875|gb|EGF84865.1| DNA topoisomerase I [Chlamydophila psittaci Cal10]
gi|328915168|gb|AEB56001.1| DNA topoisomerase I [Chlamydophila psittaci 6BC]
gi|334693769|gb|AEG86987.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 01DC11]
gi|334694748|gb|AEG87965.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 02DC15]
gi|334695722|gb|AEG88938.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 08DC60]
gi|405781329|gb|AFS20079.1| DNA topoisomerase I [Chlamydia psittaci 84/55]
gi|405782374|gb|AFS21123.1| DNA topoisomerase I [Chlamydia psittaci GR9]
gi|405784518|gb|AFS23265.1| DNA topoisomerase I [Chlamydia psittaci VS225]
Length = 862
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 800 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQHL 858
Query: 118 VKT 120
K+
Sbjct: 859 FKS 861
>gi|407458569|ref|YP_006736874.1| DNA topoisomerase I [Chlamydia psittaci WS/RT/E30]
gi|405784806|gb|AFS23552.1| DNA topoisomerase I [Chlamydia psittaci WS/RT/E30]
Length = 862
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 800 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQHL 858
Query: 118 VKT 120
K+
Sbjct: 859 FKS 861
>gi|406592894|ref|YP_006740074.1| DNA topoisomerase I [Chlamydia psittaci CP3]
gi|406594463|ref|YP_006742155.1| DNA topoisomerase I [Chlamydia psittaci MN]
gi|410858916|ref|YP_006974856.1| DNA topoisomerase I-fused to SWI domain [Chlamydia psittaci 01DC12]
gi|405782895|gb|AFS21643.1| DNA topoisomerase I [Chlamydia psittaci MN]
gi|405788766|gb|AFS27509.1| DNA topoisomerase I [Chlamydia psittaci CP3]
gi|410811811|emb|CCO02466.1| DNA topoisomerase I-fused to SWI domain [Chlamydia psittaci 01DC12]
Length = 862
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 800 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQHL 858
Query: 118 VKT 120
K+
Sbjct: 859 FKS 861
>gi|384454012|ref|YP_005666608.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci C19/98]
gi|334692793|gb|AEG86012.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci C19/98]
Length = 855
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 793 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQHL 851
Query: 118 VKT 120
K+
Sbjct: 852 FKS 854
>gi|384250769|gb|EIE24248.1| SWIB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 322
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 49 TSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLL 98
+++L FL PR+E K + ++IK +N +NP K+ ++ ++KLK++
Sbjct: 118 SADLQAFLGQESMPRTEVVKKMWEYIKEHNLQNPNDKRKIILDDKLKTIF 167
>gi|338731806|ref|YP_004662925.1| hypothetical protein SNE_B24300 [Simkania negevensis Z]
gi|336481189|emb|CCB87789.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 85
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
PR++ K I +IK + R++P K++++ +EKL + K I + E+ K
Sbjct: 29 PRTQVTKKIWDYIKKHKRQDPENKRNIIPDEKLAKVFGSKMTINMFEMTK 78
>gi|443897196|dbj|GAC74537.1| hypothetical protein PANT_12d00019 [Pseudozyma antarctica T-34]
Length = 262
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVK 119
PR K + +IK NN +N K+ +L + KL + GK+ + E+AKL+ K
Sbjct: 202 PRHAVVKQLWAYIKSNNLQNESNKRQILCDAKLTDIF-GKEAVDSFEMAKLIGSHLTK 258
>gi|407461185|ref|YP_006738960.1| DNA topoisomerase I [Chlamydia psittaci WC]
gi|405787519|gb|AFS26263.1| DNA topoisomerase I [Chlamydia psittaci WC]
Length = 862
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 800 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNRHL 858
Query: 118 VKT 120
K+
Sbjct: 859 FKS 861
>gi|407459812|ref|YP_006737915.1| DNA topoisomerase I [Chlamydia psittaci M56]
gi|405786557|gb|AFS25302.1| DNA topoisomerase I [Chlamydia psittaci M56]
Length = 862
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 800 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQHL 858
Query: 118 VKT 120
K+
Sbjct: 859 FKS 861
>gi|449071635|ref|YP_007438715.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci Mat116]
gi|449040143|gb|AGE75567.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci Mat116]
Length = 734
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 59 PEP-PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQF 117
PEP R E K + ++IK +N ++P KK LL +EK ++++ G + + + ++ KLL+
Sbjct: 672 PEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQHL 730
Query: 118 VKT 120
K+
Sbjct: 731 FKS 733
>gi|375149107|ref|YP_005011548.1| SWIB/MDM2 domain-containing protein [Niastella koreensis GR20-10]
gi|361063153|gb|AEW02145.1| SWIB/MDM2 domain-containing protein [Niastella koreensis GR20-10]
Length = 127
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 62 PRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQ 116
PR+E K I ++IK N ++ K+ + + KLK L GKD+I + E+AK+++
Sbjct: 72 PRTEIVKKIWEYIKKNKLQDNKNKRMINADSKLKPLF-GKDQISMFELAKVVNKH 125
>gi|351724909|ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycine max]
gi|255631726|gb|ACU16230.1| unknown [Glycine max]
Length = 100
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 44 VAPSSTSELGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDR 103
V S S LG F K I +IK NN ++ K + +EKLKS+L GK +
Sbjct: 34 VGQSQISRLGCF------------KCIWSYIKTNNLQDQNNKNVVNCDEKLKSILLGKPQ 81
Query: 104 IGIPEIAKLLSGQFVK 119
+ + E+ L+ F K
Sbjct: 82 VELAELPALIKMHFPK 97
>gi|409043948|gb|EKM53430.1| hypothetical protein PHACADRAFT_259812 [Phanerochaete carnosa
HHB-10118-sp]
Length = 253
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 52 LGRFLNIPEPPRSETAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAK 111
L L + + R + K I +IK + +NP K++++ +EK+K + + D+IG+ + +
Sbjct: 178 LAELLGVTQLSRPQAVKHIWVYIKEKDLQNPADKREIICDEKMKKIFNV-DKIGMFRMNQ 236
Query: 112 LL 113
+L
Sbjct: 237 ML 238
>gi|357154373|ref|XP_003576761.1| PREDICTED: uncharacterized protein LOC100835763 [Brachypodium
distachyon]
Length = 1800
Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 16 GAGGLKLQAAASSSKAQAK-AKAKGKTKSVAPSSTSELGRFLNIPEPPRS---------E 65
GA KL ASSS+ +K +++ G + S A ++ L+ R+ E
Sbjct: 691 GAKVRKLSKRASSSEHGSKESESVGTSTSSAEEASWASKELLDFVACMRNGDKSALSQFE 750
Query: 66 TAKLITKFIKLNNRENPGMKKDLLGEEKLKSLLSGKDRIGIPEIAKLLSGQFVKT 120
LI ++IK N +P K ++ + L+SL GK+R+G E+ KLL F+ T
Sbjct: 751 VQGLILEYIKRENLRDPRRKSQIVCDPLLQSLF-GKERVGHFEMLKLLESHFLMT 804
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.126 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,755,019,575
Number of Sequences: 23463169
Number of extensions: 62900471
Number of successful extensions: 233682
Number of sequences better than 100.0: 438
Number of HSP's better than 100.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 233324
Number of HSP's gapped (non-prelim): 535
length of query: 123
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 34
effective length of database: 5,976,006,030
effective search space: 203184205020
effective search space used: 203184205020
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 69 (31.2 bits)