BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044320
(176 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 14 RLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPN---- 69
R IALG A G+ YLH DP IIH D+KA N LLD +F V DF +++L +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 70 --INGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACLYM 105
+ G +GH I + T + +EK+D++G G+ L +
Sbjct: 193 XAVRGXIGH--IAPEYLSTGKSSEKTDVFGYGVMLLEL 228
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 14 RLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPN---- 69
R IALG A G+ YLH DP IIH D+KA N LLD +F V DF +++L +
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 70 --INGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACLYM 105
+ G +GH I + T + +EK+D++G G+ L +
Sbjct: 201 XAVRGTIGH--IAPEYLSTGKSSEKTDVFGYGVMLLEL 236
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 16/102 (15%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPV 67
S+S RL I +G A G+ YLHT A IIH D+K+ N LLD F PK+ DF IS+
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 68 PNINGVVGHVSIVVKGTH---------TQQLTEKSDIYGLGI 100
+ H+ VVKGT +LTEKSD+Y G+
Sbjct: 192 LDQT----HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 16/102 (15%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPV 67
S+S RL I +G A G+ YLHT A IIH D+K+ N LLD F PK+ DF IS+
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 68 PNINGVVGHVSIVVKGTH---------TQQLTEKSDIYGLGI 100
H+ VVKGT +LTEKSD+Y G+
Sbjct: 192 LGQT----HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR----L 64
+S MR IA G A GI +LH IH DIK+ N LLD FT K+ DF ++R
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 65 APVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACL 103
A + +VG + + ++T KSDIY G+ L
Sbjct: 187 AQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLL 225
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR----L 64
+S MR IA G A GI +LH IH DIK+ N LLD FT K+ DF ++R
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 65 APVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACL 103
A +VG + + ++T KSDIY G+ L
Sbjct: 187 AQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLL 225
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR----L 64
+S MR IA G A GI +LH IH DIK+ N LLD FT K+ DF ++R
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 65 APVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACL 103
A +VG + + ++T KSDIY G+ L
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLL 219
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R + RL +A +A+G+ YLH +PPI+H D+K+ N L+D K+T KV DF +SRL
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK 189
Query: 66 PVPNINGVVGHVS---IVVKGTHTQQLTEKSDIYGLGI 100
+ + + + + EKSD+Y G+
Sbjct: 190 ASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR----L 64
+S R IA G A GI +LH IH DIK+ N LLD FT K+ DF ++R
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 65 APVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACL 103
A + +VG + ++T KSDIY G+ L
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLL 216
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R + RL +A +A+G+ YLH +PPI+H ++K+ N L+D K+T KV DF +SRL
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189
Query: 66 PVPNINGVVGHVS---IVVKGTHTQQLTEKSDIYGLGI 100
++ + + + + EKSD+Y G+
Sbjct: 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGV 227
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 130 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 217
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 136 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 133 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 220
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 135 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 222
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 157 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 244
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDS-----KFTPKVFDFEISR 63
+ +++L + L +A GI Y+ + +PPI+H D+++ N L S KV DF +S+
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
Query: 64 LAPVPNINGVVGHVSIVVK---GTHTQQLTEKSDIYGLGI 100
+ V +++G++G+ + G + TEK+D Y +
Sbjct: 178 QS-VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ YL A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 156 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 243
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ +L A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 136 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ +L A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ +L A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDS-----KFTPKVFDFEISR 63
+ +++L + L +A GI Y+ + +PPI+H D+++ N L S KV DF +S+
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
Query: 64 LAPVPNINGVVGHVSIVVK---GTHTQQLTEKSDIYGLGI 100
+ V +++G++G+ + G + TEK+D Y +
Sbjct: 178 QS-VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ +L A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL---APVPNINGVVGHVSI 79
+GI + H D I+H DIK N L+DS T K+FDF I++ + N V+G V
Sbjct: 122 DGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 80 V----VKGTHTQQLTEKSDIYGLGIACLYM--GLYSFEYLKRFMSLALKYCED 126
KG T + T DIY +GI M G F + +S+A+K+ +D
Sbjct: 179 FSPEQAKGEATDECT---DIYSIGIVLYEMLVGEPPFNG-ETAVSIAIKHIQD 227
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ +L A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 197 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 284
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ +L A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 143 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR------LAPVPNI 70
L +A+G+ +L A +H D+ A N +LD KFT KV DF ++R V N
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 71 NGVVGHVS-IVVKGTHTQQLTEKSDIYGLGI 100
G V + ++ TQ+ T KSD++ G+
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDS-----KFTPKVFDFEISR 63
+ +++L + L +A GI Y+ + +PPI+H D+++ N L S KV DF S+
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
Query: 64 LAPVPNINGVVGHVSIVVK---GTHTQQLTEKSDIYGLGI 100
+ V +++G++G+ + G + TEK+D Y +
Sbjct: 178 QS-VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R S+ LA L A + EG+ YLH + IH D+ A N LLD+ K+ DF +++
Sbjct: 128 RHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184
Query: 66 P 66
P
Sbjct: 185 P 185
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
+R+ ++ + L +A G+ YL A+ +H D+ A N +LD FT KV DF ++R
Sbjct: 118 QRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 66 PVPNINGVVG--HVSIVVKGT-----HTQQLTEKSDIYGLGI 100
V H + VK T T + T KSD++ G+
Sbjct: 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGV 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R S+ LA L A + EG+ YLH++ IH ++ A N LLD+ K+ DF +++
Sbjct: 111 RHSIGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 66 P 66
P
Sbjct: 168 P 168
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 19/111 (17%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF-----------EISR 63
LHI + +AE + +LH++ ++H D+K +N KV DF E +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 64 LAPVPNINGVVGHVSIVV----KGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
L P+P G V + + H + K DI+ LG+ L+ LYSF
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGL-ILFELLYSF 273
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R S+ LA L A + EG+ YLH + IH ++ A N LLD+ K+ DF +++
Sbjct: 111 RHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 66 P 66
P
Sbjct: 168 P 168
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
+ L+ LHIA +A G++YL A +H D+ N L+ + K+ DF +SR
Sbjct: 130 LGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 69 NINGVVGHVSIVVK-----GTHTQQLTEKSDIYGLGI 100
+ V GH + ++ ++ T +SD++ G+
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF-----------EISR 63
LHI L +AE + +LH++ ++H D+K +N KV DF E +
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 64 LAPVPNINGVVGHVSIVV----KGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
L P+P G V + + H + K DI+ LG+ L+ LY F
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGL-ILFELLYPF 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
LHIA +A G++YL A +H D+ N L+ K+ DF +SR + V
Sbjct: 131 LHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVG 187
Query: 75 GHVSIVVK-----GTHTQQLTEKSDIYGLGI 100
GH + ++ ++ T +SD++ LG+
Sbjct: 188 GHTMLPIRWMPPESIMYRKFTTESDVWSLGV 218
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 7 RSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF-EISRLA 65
+ V +A H AL +G+ YLH+ +IH D+KA N LL K+ DF S +A
Sbjct: 152 QEVEIAAVTHGAL---QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
Query: 66 PVPNINGVVGHVSI-VVKGTHTQQLTEKSDIYGLGIACL 103
P G ++ V+ Q K D++ LGI C+
Sbjct: 206 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 244
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 7 RSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF-EISRLA 65
+ V +A H AL +G+ YLH+ +IH D+KA N LL K+ DF S +A
Sbjct: 113 QEVEIAAVTHGAL---QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
Query: 66 PVPNINGVVGHVSI-VVKGTHTQQLTEKSDIYGLGIACL 103
P G ++ V+ Q K D++ LGI C+
Sbjct: 167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R V LA L A + EG+ YLH + IH + A N LLD+ K+ DF +++
Sbjct: 105 RHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
Query: 66 P 66
P
Sbjct: 162 P 162
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R V LA L A + EG+ YLH + IH + A N LLD+ K+ DF +++
Sbjct: 106 RHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
Query: 66 P 66
P
Sbjct: 163 P 163
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF----EISRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF E SR +
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 225
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDS-KFTPKVFDFEISRLAPVPNINGVVGHVSIVV 81
+G+ +LHT PPIIH D+K N + + K+ D ++ L V+G
Sbjct: 140 KGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXA 198
Query: 82 KGTHTQQLTEKSDIYGLGIACLYMGLYSFEY 112
+ ++ E D+Y G L + Y
Sbjct: 199 PEXYEEKYDESVDVYAFGXCXLEXATSEYPY 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF----EISRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF E SR +
Sbjct: 127 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + + G + +
Sbjct: 121 LANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYL 177
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC--LYMGLYSFE 111
++G + EK D++ LG+ C +G+ FE
Sbjct: 178 PPEMIEG---RMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 171 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 228
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 229 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 263
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 136 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 193
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 194 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 228
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF----EISRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF E SR +
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 71 NGVVGHVSI----VVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 128 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 185
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 186 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVS-I 79
LA + Y H++ +IH DIK N LL S K+ DF S AP + + G + +
Sbjct: 143 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYL 199
Query: 80 VVKGTHTQQLTEKSDIYGLGIAC 102
+ + EK D++ LG+ C
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLC 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
LH A +A G+ YL + IH D+ A N L+ + K+ DF +SR V + +
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-YVKKTM 190
Query: 75 GHVSI---VVKGTHTQQLTEKSDIYGLGI 100
G + + ++ + T SD++ G+
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGV 219
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 167 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 201
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 167 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 201
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 167 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 167 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 201
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 121 LANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYL 177
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC--LYMGLYSFE 111
++G + EK D++ LG+ C +G+ FE
Sbjct: 178 PPEMIEG---RMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
LH A +A G+ YL + IH D+ A N L+ + K+ DF +SR V + +
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-YVKKTM 200
Query: 75 GHVSI---VVKGTHTQQLTEKSDIYGLGI 100
G + + ++ + T SD++ G+
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGV 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 167 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 201
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH + IIH D+K+ N L T K+ DF + SR + +
Sbjct: 135 IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGI 100
G V V++ + +SD+Y GI
Sbjct: 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGI 225
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 9 VSLAMRLHIALGLAEGILYLHTE-------ADPPIIHWDIKATNTLLDSKFTPKVFDFEI 61
VS HIA +A G+ YLH + P I H DIK+ N LL + T + DF +
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 62 S 62
+
Sbjct: 178 A 178
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF----EISRLAPVPNI 70
+ IA A G+ YLH ++ IIH D+K+ N L T K+ DF E SR +
Sbjct: 123 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + + +SD+Y GI
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + + G + +
Sbjct: 120 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYL 176
Query: 81 -VKGTHTQQLTEKSDIYGLGIAC 102
+ + EK D++ LG+ C
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLC 199
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF----EISRLAPVPNI 70
+ IA A G+ YLH ++ IIH D+K+ N L T K+ DF E SR +
Sbjct: 123 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + + +SD+Y GI
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + + G + +
Sbjct: 118 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYL 174
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 175 PPEMIEG---RMHDEKVDLWSLGVLC 197
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 134 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP--------KVFDFEISR 63
++ A+ +A G+ YLH EA PIIH D+K++N L+ K K+ DF ++R
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 225
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL------APVPNINGV 73
G+A G+ YL AD +H D+ A N L++S KV DF +SR+ A G
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 74 VGHVSIVVKGTHTQQLTEKSDIYGLGI 100
+ + ++ T SD++ GI
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGI 236
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 122 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 178
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 179 PPEMIEG---RMHDEKVDLWSLGVLC 201
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 122 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Query: 81 -VKGTHTQQLTEKSDIYGLGIAC 102
+ + EK D++ LG+ C
Sbjct: 179 PPEXIEGRXHDEKVDLWSLGVLC 201
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 120 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 176
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 177 PPEMIEG---RMHDEKVDLWSLGVLC 199
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 118 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 174
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 175 PPEMIEG---RMHDEKVDLWSLGVLC 197
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 159
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 160 TGDTFTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIVVKGTHT 86
Y+H E + I H D+K +N L+D K+ DF S I G G + +
Sbjct: 166 YIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFS 223
Query: 87 QQLT---EKSDIYGLGIACLYMGLYS 109
+ + K DI+ LGI CLY+ Y+
Sbjct: 224 NESSYNGAKVDIWSLGI-CLYVMFYN 248
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + +G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 112 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGT 169
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + M + +
Sbjct: 170 RSYMSPERLQGTH---YSVQSDIWSMGLSLVEMAVGRY 204
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 71 NGVVGHVSI----VVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 202
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 109 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 71 NGVVGHVSI----VVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 199
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 71 NGVVGHVSI----VVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 120 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 176
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 177 PPEMIEG---RMHDEKVDLWSLGVLC 199
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 71 NGVVGHVSI----VVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 202
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A+G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 71 NGVVGHVSI----VVKGTHTQQLTEKSDIYGLGI 100
+ G + V++ + +SD+Y GI
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 122 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 179 PPEMIEG---RMHDEKVDLWSLGVLC 201
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 134 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 190
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 191 PPEMIEG---RMHDEKVDLWSLGVLC 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 122 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 178
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 179 PPEMIEG---RMHDEKVDLWSLGVLC 201
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL A+ +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGI 238
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 119 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 175
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 176 PPEMIEG---RMHDEKVDLWSLGVLC 198
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 121 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 177
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 178 PPEMIEG---RMHDEKVDLWSLGVLC 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 120 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 176
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 177 PPEMIEG---RMHDEKVDLWSLGVLC 199
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 162 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 162 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 143 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 199
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 200 PPEMIEG---RMHDEKVDLWSLGVLC 222
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 114 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 170
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 171 PPEMIEG---RMHDEKVDLWSLGVLC 193
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 159
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 160 TGDTXTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 162 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 110 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 167 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 162 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 116 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL 172
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 173 PPEMIEG---RMHDEKVDLWSLGVLC 195
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 103 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 159
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 160 TGDTXTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 122 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYL 178
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 179 PPEMIEG---RMHDEKVDLWSLGVLC 201
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 120 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 176
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 177 PPEMIEG---RMHDEKVDLWSLGVLC 199
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIVVK 82
+G+ YLH I+H D+K N LLD K+ DF +++ P N H +V +
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRAYXH-QVVTR 176
Query: 83 GTHTQQLTEKSDIYGLGIACLYMGLYSFEYLKR 115
+L + +YG+G+ +G E L R
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 117 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYL 173
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 174 PPEMIEG---RMHDEKVDLWSLGVLC 196
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 47/171 (27%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI----SRLAPVPNI 70
+ IA A G+ YLH ++ IIH D+K+ N L T K+ DF + SR +
Sbjct: 111 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF 167
Query: 71 NGVVGHV----SIVVKGTHTQQLTEKSDIYGLGIACLYMGLYSFEY-------------- 112
+ G + V++ + + +SD+Y GI + Y
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 227
Query: 113 ------------------LKRFMSLALKYCEDETKARPSML----EVARQL 141
+KR M+ LK DE + P +L E+AR+L
Sbjct: 228 RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 278
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+ G+ YL +D +H D+ A N L+DS KV DF +SR L P+
Sbjct: 159 GVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 79 IVVKGTHTQQL-----TEKSDIYGLGI 100
I ++ T + + + SD++ G+
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGV 242
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
+++ + G+ YL + I+H D+K +N L++S+ K+ DF +S N VG
Sbjct: 119 VSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 176
Query: 77 VSIV----VKGTHTQQLTEKSDIYGLGIACLYMGLYSF 110
S + ++GTH + +SDI+ +G++ + + + +
Sbjct: 177 RSYMAPERLQGTH---YSVQSDIWSMGLSLVELAVGRY 211
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGI 238
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL----APVPNINGVVG 75
G+A G+ YL AD +H D+ A N L++S KV DF +SR P +G
Sbjct: 143 GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 199
Query: 76 HVSIVVKGT-----HTQQLTEKSDIYGLGI 100
I ++ T ++ T SD++ GI
Sbjct: 200 G-KIPIRWTAPEAIQYRKFTSASDVWSYGI 228
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 126 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGI 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 126 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGI 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ DF S AP + G + +
Sbjct: 118 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYL 174
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 175 PPEMIEG---RMHDEKVDLWSLGVLC 197
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
LH A +A G+ YL + IH ++ A N L+ + K+ DF +SR V + +
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV-YVKKTM 197
Query: 75 GHVSI---VVKGTHTQQLTEKSDIYGLGI 100
G + + ++ + T SD++ G+
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGV 226
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 143 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGI 226
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGI 238
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 106 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 162
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 163 TGDTYTAPAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGI 238
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGI 238
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 163
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 164 TGDTYTAPAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 153 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGI 236
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGI 238
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGI 238
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
L + + EG+ +L + IH D+ A N L+D KV DF ++R V
Sbjct: 107 LEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163
Query: 75 GHVSIVVKGT-----HTQQLTEKSDIYGLGI 100
G VK + H + + KSD++ GI
Sbjct: 164 G-TKFPVKWSAPEVFHYFKYSSKSDVWAFGI 193
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+A G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGI 238
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 110 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 167 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 118 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 174
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 175 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G+ G+ YL +D +H D+ A N L+DS KV DF +SR L P+
Sbjct: 159 GVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 79 IVVKGTHTQQL-----TEKSDIYGLGI 100
I ++ T + + + SD++ G+
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGV 242
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 110 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 167 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 105 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 162 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 110 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 167 TGDTXTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 106 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 162
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 163 TGDTXTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 110 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 167 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 109 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 165
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 166 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 163
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 164 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 163
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 164 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 105 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 162 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R V+ + L++A ++ + YL + IH D+ A N L+ KV DF +SRL
Sbjct: 124 REEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLM 180
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGI 100
G +K T + L KSD++ G+
Sbjct: 181 TGDTYTAHAG-AKFPIKWTAPESLAYNTFSIKSDVWAFGV 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 16 HIALGLAEGILYLHTEA--------DPPIIHWDIKATNTLLDSKFTPKVFDFEIS-RLAP 66
H+A ++ G+ YLH + P I H D K+ N LL S T + DF ++ R P
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Query: 67 VP---NINGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACLYMGLYSFEYLKR 115
+ +G VG + + + D + L I MGL +E + R
Sbjct: 176 GKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAF-LRIDMYAMGLVLWELVSR 226
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ +F S AP + G + +
Sbjct: 119 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYL 175
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 176 PPEMIEG---RMHDEKVDLWSLGVLC 198
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA + Y H++ +IH DIK N LL S K+ +F S AP + G + +
Sbjct: 120 LANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYL 176
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC 102
++G + EK D++ LG+ C
Sbjct: 177 PPEMIEG---RMHDEKVDLWSLGVLC 199
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF 59
R +S L I + ++H + PPIIH D+K N LL ++ T K+ DF
Sbjct: 130 RGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 16/106 (15%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
IA+ + + + +LH++ +IH D+K +N L+++ K+ DF IS ++ V
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKT 211
Query: 77 VSIVVKG----------THTQQLTEKSDIYGLGIACLYMGLYSFEY 112
+ K + + + KSDI+ LGI + + + F Y
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 257
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 178
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNI--NGVVGHVSIV 80
+G+ YLH+E IH DIKA N LL + K+ DF ++ I N VG +
Sbjct: 127 KGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 81 VKGTHTQQLTE-KSDIYGLGIACLYMG 106
Q + K+DI+ LGI + +
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELA 210
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNI--NGVVGHVSIV 80
+G+ YLH+E IH DIKA N LL + K+ DF ++ I N VG +
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 81 VKGTHTQQLTE-KSDIYGLGIACL 103
Q + K+DI+ LGI +
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAI 211
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 181
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA 176
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA 169
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 9 VSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
+S A +L IA +A G+ YL +H D+ N L+ K+ DF +SR
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 69 NINGVVGHVSIVVKGTHTQQL-----TEKSDIYGLGI 100
+ G+ +I ++ + + T +SD++ G+
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 264
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 16/106 (15%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
IA+ + + + +LH++ +IH D+K +N L+++ K+ DF IS ++ V
Sbjct: 114 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL----VDDVAKD 167
Query: 77 VSIVVKG----------THTQQLTEKSDIYGLGIACLYMGLYSFEY 112
+ K + + + KSDI+ LGI + + + F Y
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
G+A G+ YL A+ +H D+ A N L++S KV DF +SR
Sbjct: 126 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF 167
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ VS + L++A ++ + YL + IH ++ A N L+ KV DF +SRL
Sbjct: 312 RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 368
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 369 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 416
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAPVPNINGVVGHVS 78
G++ G+ YL +D +H D+ A N L++S KV DF +SR L P
Sbjct: 132 GISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 79 IVVKGTHTQ-----QLTEKSDIYGLGI 100
I ++ T + + T SD++ GI
Sbjct: 189 IPIRWTAPEAIAFRKFTSASDVWSYGI 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 175
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA 176
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 169
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 170
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.1 bits (74), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 20 GLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
G+A G+ YL A+ +H D+ A N L++S KV DF +SR
Sbjct: 124 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRF 165
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 174
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.1 bits (74), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
GI +LH+ IIH D+K +N ++ S T K+ DF ++R A
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.7 bits (73), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 27/128 (21%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL----------------AP 66
E + Y+H++ IIH D+K N +D K+ DF +++
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 67 VPNINGVVGHVSIVVKGT--HTQQLTEKSDIYGLGIACLYM------GLYSFEYLKRFMS 118
N+ +G V T EK D+Y LGI M G+ LK+ S
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 119 LALKYCED 126
+++++ D
Sbjct: 244 VSIEFPPD 251
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 27/128 (21%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL----------------AP 66
E + Y+H++ IIH D+K N +D K+ DF +++
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 67 VPNINGVVGHVSIVVKGT--HTQQLTEKSDIYGLGIACLYM------GLYSFEYLKRFMS 118
N+ +G V T EK D+Y LGI M G+ LK+ S
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 119 LALKYCED 126
+++++ D
Sbjct: 244 VSIEFPPD 251
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNI--NGVVGHVSIV 80
+G+ YLH+E IH DIKA N LL K+ DF ++ I N VG +
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 171
Query: 81 VKGTHTQQLTE-KSDIYGLGIACLYMG 106
Q + K+DI+ LGI + +
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELA 198
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSK---FTPKVFDFEISR-LAPVPNINGVVGHVSI 79
GI YLH I+H DIK N LL++K K+ DF +S + + +G
Sbjct: 158 GICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 80 VVKGTHTQQLTEKSDIYGLGI 100
+ ++ EK D++ G+
Sbjct: 215 IAPEVLKKKYNEKCDVWSCGV 235
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNI--NGVVGHVSIV 80
+G+ YLH+E IH DIKA N LL K+ DF ++ I N VG +
Sbjct: 130 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 186
Query: 81 VKGTHTQQLTE-KSDIYGLGIACLYMG 106
Q + K+DI+ LGI + +
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELA 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNI--NGVVGHVSIV 80
+G+ YLH+E IH DIKA N LL K+ DF ++ I N VG +
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 171
Query: 81 VKGTHTQQLTE-KSDIYGLGIACLYMG 106
Q + K+DI+ LGI + +
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELA 198
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNI--NGVVGHVSIV 80
+G+ YLH+E IH DIKA N LL K+ DF ++ I N VG +
Sbjct: 135 KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 191
Query: 81 VKGTHTQQLTE-KSDIYGLGIACL 103
Q + K+DI+ LGI +
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAI 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 11 LAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL--APVP 68
+R+ L LA + ++ ++H D+K N LD K K+ DF ++R+
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 69 NINGVVGH-VSIVVKGTHTQQLTEKSDIYGLGIACL 103
VG + + + EKSDI+ LG CL
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG--CL 205
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVS-- 78
LA+ + Y H +IH DIK N L+ K K+ DF S AP + G +
Sbjct: 123 LADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYL 179
Query: 79 ---IVVKGTHTQQLTEKSDIYGLGIAC--LYMGLYSF------EYLKRFMSLALKY 123
++ TH EK D++ G+ C +G+ F E +R +++ LK+
Sbjct: 180 PPEMIEGKTH----DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 5 FRRSVSLAMRLHIA---LGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI 61
FR V L LHI L G+ Y+H+ I+H D+K N L++ + KV DF +
Sbjct: 147 FRTPVYLT-ELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGL 202
Query: 62 SRLAPVPNING 72
+R P NG
Sbjct: 203 ARTVDYPE-NG 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGH 76
IA+ + + + +LH++ +IH D+K +N L+++ K DF IS ++ V
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL----VDDVAKD 194
Query: 77 VSIVVKG----------THTQQLTEKSDIYGLGIACLYMGLYSFEY 112
+ K + + + KSDI+ LGI + + + F Y
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY 240
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 23/105 (21%)
Query: 11 LAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNI 70
+R+ L LA + ++ ++H D+K N LD K K+ DF ++R
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR------- 164
Query: 71 NGVVGHVSIVVK---GT---------HTQQLTEKSDIYGLGIACL 103
++ H + K GT + EKSDI+ LG CL
Sbjct: 165 --ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG--CL 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVS-- 78
LA+ + Y H +IH DIK N L+ K K+ DF S AP + G +
Sbjct: 124 LADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYL 180
Query: 79 ---IVVKGTHTQQLTEKSDIYGLGIAC--LYMGLYSF------EYLKRFMSLALKY 123
++ TH EK D++ G+ C +G+ F E +R +++ LK+
Sbjct: 181 PPEMIEGKTH----DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVS-- 78
LA+ + Y H +IH DIK N L+ K K+ DF S AP + G +
Sbjct: 123 LADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYL 179
Query: 79 ---IVVKGTHTQQLTEKSDIYGLGIAC--LYMGLYSF------EYLKRFMSLALKY 123
++ TH EK D++ G+ C +G+ F E +R +++ LK+
Sbjct: 180 PPEMIEGKTH----DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
R +V++ + +AL A G+ +LH T+ P I H D+K+ N L+ T + D
Sbjct: 100 RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 159
Query: 61 IS 62
++
Sbjct: 160 LA 161
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
R +V++ + +AL A G+ +LH T+ P I H D+K+ N L+ T + D
Sbjct: 120 RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 179
Query: 61 IS 62
++
Sbjct: 180 LA 181
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 10 SLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAP--- 66
+R+ L LA + ++ ++H D+K N LD K K+ DF ++R+
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 67 --VPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACL 103
G ++S + + EKSDI+ LG CL
Sbjct: 171 DFAKEFVGTPYYMS--PEQMNRMSYNEKSDIWSLG--CL 205
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH ++ A N L+ KV DF +SRL
Sbjct: 351 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 407
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 408 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 455
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
R +V++ + +AL A G+ +LH T+ P I H D+K+ N L+ T + D
Sbjct: 97 RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 156
Query: 61 IS 62
++
Sbjct: 157 LA 158
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
R+ V+ + L++A ++ + YL + IH ++ A N L+ KV DF +SRL
Sbjct: 309 RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 365
Query: 66 PVPNINGVVGHVSIVVKGTHTQQLTE-----KSDIYGLGIACLYMGLYS 109
G +K T + L KSD++ G+ + Y
Sbjct: 366 TGDTYTAHAG-AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 413
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
R +V++ + +AL A G+ +LH T+ P I H D+K+ N L+ T + D
Sbjct: 133 RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 192
Query: 61 IS 62
++
Sbjct: 193 LA 194
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
R +V++ + +AL A G+ +LH T+ P I H D+K+ N L+ T + D
Sbjct: 94 RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153
Query: 61 IS 62
++
Sbjct: 154 LA 155
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
R +V++ + +AL A G+ +LH T+ P I H D+K+ N L+ T + D
Sbjct: 95 RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 154
Query: 61 IS 62
++
Sbjct: 155 LA 156
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL-----APVPNINGVVGHVS-IVVKGTHTQQL 89
IIH D+K N L+ + KV DF I+R V V+G + + +
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 90 TEKSDIYGLG 99
+SD+Y LG
Sbjct: 197 DARSDVYSLG 206
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 19 LGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L L GI Y H D ++H D+K N L++ + K+ DF ++R +P
Sbjct: 107 LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 19 LGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L L GI Y H D ++H D+K N L++ + K+ DF ++R +P
Sbjct: 107 LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEISRL-APVPNINGVVGHVSI 79
G+ YLH I+H D+K N LL+SK K+ DF +S + + +G
Sbjct: 148 GVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204
Query: 80 VVKGTHTQQLTEKSDIYGLGI 100
+ ++ EK D++ +G+
Sbjct: 205 IAPEVLRKKYDEKCDVWSIGV 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 19 LGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L L GI Y H D ++H D+K N L++ + K+ DF ++R +P
Sbjct: 107 LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
EG+ YLH IH D+KA N LL + ++ DF +S
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIVVKGTH-------TQQ 88
IIH D+K N ++ + KV DF I+R A + N V +++ +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 89 LTEKSDIYGLG 99
+ +SD+Y LG
Sbjct: 196 VDARSDVYSLG 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
EG+ YLH IH D+KA N LL + ++ DF +S
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIVVKGTH-------TQQ 88
IIH D+K N ++ + KV DF I+R A + N V +++ +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 89 LTEKSDIYGLG 99
+ +SD+Y LG
Sbjct: 196 VDARSDVYSLG 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
L +GI YLH + IIH DIK +N L+ K+ DF +S
Sbjct: 146 LIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSN 185
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDS-KFTPKVFDFEIS-RLAPV----PNINGVVGH 76
EG+ YLH D I+H DIK N L+++ K+ DF S RLA + G + +
Sbjct: 133 EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQY 189
Query: 77 VSIVVKGTHTQQLTEKSDIYGLGIACLYM 105
++ + + + +DI+ LG + M
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEM 218
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
G+ Y H ++H D+K N LLD+ K+ DF +S +
Sbjct: 128 GVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM 165
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL-----APVPNINGVVGHVS-IVVKGTHTQQL 89
IIH D+K N ++ + KV DF I+R V V+G + + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 90 TEKSDIYGLG 99
+SD+Y LG
Sbjct: 197 DARSDVYSLG 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIVVKGTH-------TQQ 88
IIH D+K N ++ + KV DF I+R A + N V +++ +
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDS 212
Query: 89 LTEKSDIYGLG 99
+ +SD+Y LG
Sbjct: 213 VDARSDVYSLG 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL-----APVPNINGVVGHVS-IVVKGTHTQQL 89
IIH D+K N ++ + KV DF I+R V V+G + + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 90 TEKSDIYGLG 99
+SD+Y LG
Sbjct: 197 DARSDVYSLG 206
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVA 174
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 16/60 (26%)
Query: 3 SRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
S+FR+ VS + Y H + I+H D+KA N LLD+ K+ DF S
Sbjct: 118 SKFRQIVS-------------AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 83 GTHTQQLTEK-SDIYGLG--IACLYMGLYSF----EYL 113
T++ K SD++ LG I L GL F EYL
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKF---TPKVFDFEISR 63
EG+ YLH I+H D+K N LL S + K+ DF +SR
Sbjct: 142 EGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA 194
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA 178
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 16/60 (26%)
Query: 3 SRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
S+FR+ VS + Y H + I+H D+KA N LLD+ K+ DF S
Sbjct: 115 SKFRQIVS-------------AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 7 RSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR--- 63
R++++ + A +++G+ YL A+ ++H D+ A N L+ K+ DF +SR
Sbjct: 145 RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 64 --LAPVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGI 100
+ V G + + ++ T +SD++ G+
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDS-KFTPKVFDFEIS-RLAPV----PNINGVVGH 76
EG+ YLH D I+H DIK N L+++ K+ DF S RLA + G + +
Sbjct: 119 EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQY 175
Query: 77 VSIVVKGTHTQQLTEKSDIYGLGIACLYM 105
++ + + + +DI+ LG + M
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEM 204
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA 178
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 14 RLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
+ ++ L + I YLH+ ++H D+K +N LL+++ KV DF +SR
Sbjct: 111 KQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA 174
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEIS----RLAPVPNINGVVGH 76
GI Y+H I+H D+K N LL+SK K+ DF +S + + + G +
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 77 VS-IVVKGTHTQQLTEKSDIYGLGI 100
++ V++GT+ EK D++ G+
Sbjct: 190 IAPEVLRGTY----DEKCDVWSAGV 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 7 RSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR--- 63
R++++ + A +++G+ YL A+ ++H D+ A N L+ K+ DF +SR
Sbjct: 145 RALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 64 --LAPVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGI 100
+ V G + + ++ T +SD++ G+
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVA 174
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 7 RSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAP 66
R + L + + L +G+ + H I+H D+K N L++ + K+ DF ++R
Sbjct: 103 RGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159
Query: 67 VP 68
+P
Sbjct: 160 IP 161
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 194
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 176
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 144 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 182
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 174
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 179
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 142 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 180
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 133 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 171
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 172
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 176
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 172
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 30.4 bits (67), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 30.4 bits (67), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 179
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 164 STXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 174
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 112 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 29 HTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
H + + IIH DIK +N LLD K+ DF IS
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N LL++ K+ DF ++R+A
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVA 176
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L G+ Y H + ++H D+K N L++ + K+ DF ++R +P
Sbjct: 109 LLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP 153
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP--KVFDFEISRLAPV-PNINGVVGHV 77
L G+ Y H+ I H D+K NTLLD P K+ DF S+ + + VG
Sbjct: 125 LLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 181
Query: 78 SIVVKGTHTQQLTEK--SDIYGLGIACLYM--GLYSFE 111
+ + +Q + +D++ G+ M G Y FE
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPN 69
+ + Y H + I+H D+KA N LLD K+ DF S V N
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 6 RRSVSLAMRLHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
R+++ + L +A+ A G+ +LH T+ P I H D K+ N L+ S + D
Sbjct: 99 RQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLG 158
Query: 61 IS 62
++
Sbjct: 159 LA 160
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 114 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L G++YLH I H DIK N LLD + K+ DF ++
Sbjct: 113 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
I+H D+KA N LLD+ K+ DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
I+H D+KA N LLD+ K+ DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
I+H D+KA N LLD+ K+ DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
G+ Y+H+ ++H D+K +N L+++ K+ DF ++R+A
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIA 194
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
I+H D+KA N LLD+ K+ DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 7 RSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR--- 63
R++++ + A +++G+ YL A+ ++H D+ A N L+ K+ DF +SR
Sbjct: 145 RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 64 --LAPVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGI 100
+ V G + + ++ T +SD++ G+
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
I+H D+KA N LLD+ K+ DF S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
L + + E + YL ++ +H D+ A N L++ + KV DF +SR V
Sbjct: 103 LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159
Query: 75 GHVSIVVKGTHTQ-----QLTEKSDIYGLGI 100
G V+ + + + + KSDI+ G+
Sbjct: 160 GS-KFPVRWSPPEVLMYSKFSSKSDIWAFGV 189
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIV 80
LA+ ++Y H + +IH DIK N LL K K+ DF S AP + G + +
Sbjct: 132 LADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYL 188
Query: 81 ----VKGTHTQQLTEKSDIYGLGIAC--LYMGLYSFE 111
++G + EK D++ +G+ C L +G FE
Sbjct: 189 PPEMIEG---RMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
L + + E + YL ++ +H D+ A N L++ + KV DF +SR V
Sbjct: 107 LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 163
Query: 75 GHVSIVVKGTHTQ-----QLTEKSDIYGLGI 100
G V+ + + + + KSDI+ G+
Sbjct: 164 GS-KFPVRWSPPEVLMYSKFSSKSDIWAFGV 193
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 15 LHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLL 48
L I L +A G+ +LH T+ P I H D+K+ N L+
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 15 LHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLL 48
L I L +A G+ +LH T+ P I H D+K+ N L+
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 175
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 26/115 (22%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVS-- 78
L G+ Y+H+ IIH D+K +N ++ ++ DF ++R A + G+V+
Sbjct: 132 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD----EEMTGYVATR 184
Query: 79 ------IVVKGTHTQQLTEKSDIYGLGI--------ACLYMGLYSFEYLKRFMSL 119
I++ H Q DI+ +G L+ G + LKR M +
Sbjct: 185 WYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 19 LGLA-EGILYLHTEADPPIIHWDIKATNTLLDS 50
LG A EG+ YLHT I+H D+KA N LL S
Sbjct: 156 LGQALEGLEYLHTRR---ILHGDVKADNVLLSS 185
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 83 GTHTQQLTEK-SDIYGLG--IACLYMGLYSF 110
T++ K SD++ LG I L GL F
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV-- 199
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 200 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 19 LGLA-EGILYLHTEADPPIIHWDIKATNTLLDS 50
LG A EG+ YLHT I+H D+KA N LL S
Sbjct: 170 LGQALEGLEYLHTRR---ILHGDVKADNVLLSS 199
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 19 LGLA-EGILYLHTEADPPIIHWDIKATNTLLDS 50
LG A EG+ YLHT I+H D+KA N LL S
Sbjct: 172 LGQALEGLEYLHTRR---ILHGDVKADNVLLSS 201
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
++H D+K N LLD+ K+ DF +S +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNM 160
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 15 LHIALGLAEGILYLH-----TEADPPIIHWDIKATNTLL 48
L I L +A G+ +LH T+ P I H D+K+ N L+
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 26/115 (22%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVS-- 78
L G+ Y+H+ IIH D+K +N ++ ++ DF ++R A + G+V+
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGYVATR 192
Query: 79 ------IVVKGTHTQQLTEKSDIYGLGI--------ACLYMGLYSFEYLKRFMSL 119
I++ H Q DI+ +G L+ G + LKR M +
Sbjct: 193 WYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 244
>pdb|4F4C|A Chain A, The Crystal Structure Of The Multi-Drug Transporter
Length = 1321
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 63 RLAPVPNIN--GVVGHVSIVVKGTHTQQLTEKSDIYGL 98
RL V N + VV + +I+ KGTHTQ ++EK Y L
Sbjct: 1275 RLNTVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKL 1312
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
++H D+K N LLD+ K+ DF +S +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNM 160
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 12 AMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP-KVFDFEISRLAPVPNI 70
A + L ++G+ YLH+ +IH D+K N LL + T K+ DF +
Sbjct: 102 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT 161
Query: 71 NGVVGHVSIVVKGTHTQQLTEKSDIYGLGI 100
N + + +EK D++ GI
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 191
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
+IH D+K +N LLD + K+ DF IS
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 23/105 (21%)
Query: 16 HIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVG 75
+I + G+ +LH +IH DIK N LL K+ DF +S ++ VG
Sbjct: 133 YICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS-----AQLDRTVG 184
Query: 76 HVSIVVKGTHTQQLTE--------------KSDIYGLGIACLYMG 106
+ + GT E KSD++ LGI + M
Sbjct: 185 RRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 109 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 165
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 166 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 205
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 26/115 (22%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVS-- 78
L G+ Y+H+ IIH D+K +N ++ ++ DF ++R A + G+V+
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGYVATR 192
Query: 79 ------IVVKGTHTQQLTEKSDIYGLGI--------ACLYMGLYSFEYLKRFMSL 119
I++ H Q DI+ +G L+ G + LKR M +
Sbjct: 193 WYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 244
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 203
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 104 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 200
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
I+H D+KA N LLD+ K+ DF S
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 12 AMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP-KVFDFEISRLAPVPNI 70
A + L ++G+ YLH+ +IH D+K N LL + T K+ DF +
Sbjct: 103 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT 162
Query: 71 NGVVGHVSIVVKGTHTQQLTEKSDIYGLGI 100
N + + +EK D++ GI
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 192
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 110 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 166
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 167 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 135 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 191
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 192 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 231
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
L + + E + YL ++ +H D+ A N L++ + KV DF +SR V
Sbjct: 108 LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 164
Query: 75 GHVSIVVKGTHTQ-----QLTEKSDIYGLGI 100
G V+ + + + + KSDI+ G+
Sbjct: 165 GS-KFPVRWSPPEVLMYSKFSSKSDIWAFGV 194
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
L + + E + YL ++ +H D+ A N L++ + KV DF +SR V
Sbjct: 123 LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179
Query: 75 GHVSIVVKGTHTQ-----QLTEKSDIYGLGI 100
G V+ + + + + KSDI+ G+
Sbjct: 180 GS-KFPVRWSPPEVLMYSKFSSKSDIWAFGV 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEIS----RLAPVPNINGVVGH 76
GI Y+H I+H D+K N LL+SK K+ DF +S + + + G +
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 77 VS-IVVKGTHTQQLTEKSDIYGLGI 100
++ V++GT+ EK D++ G+
Sbjct: 190 IAPEVLRGTY----DEKCDVWSAGV 210
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
L G+ Y+H+ +IH D+K +N L++ K+ DF ++R
Sbjct: 168 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 112 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 208
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEIS----RLAPVPNINGVVGH 76
GI Y+H I+H D+K N LL+SK K+ DF +S + + + G +
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 77 VS-IVVKGTHTQQLTEKSDIYGLGI 100
++ V++GT+ EK D++ G+
Sbjct: 190 IAPEVLRGTY----DEKCDVWSAGV 210
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV-- 202
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 203 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
L + + E + YL ++ +H D+ A N L++ + KV DF +SR V
Sbjct: 114 LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 170
Query: 75 GHVSIVVKGTHTQ-----QLTEKSDIYGLGI 100
G V+ + + + + KSDI+ G+
Sbjct: 171 GS-KFPVRWSPPEVLMYSKFSSKSDIWAFGV 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ S K+ DF +SR +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 583
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS-RLAPVPNINGVVG 75
I L E + +LH I+H D+K N LLD ++ DF S L P + + G
Sbjct: 205 IMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCG 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
L G+ Y+H+ +IH D+K +N L++ K+ DF ++R
Sbjct: 167 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
G+ +LH I+H D+K N L+ S T K+ DF ++R+
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS 62
I+H D+KA N LLD+ K+ DF S
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
G+ +LH I+H D+K N L+ S T K+ DF ++R+
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
G+ +LH I+H D+K N L+ S T K+ DF ++R+
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
G+ +LH I+H D+K N L+ S T K+ DF ++R+
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 202
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 203 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 201
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 202 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS-RLAPVPNINGVVG 75
I+H D+K N LLD K+ DF S +L P + V G
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG 185
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 206
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 207 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 201
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 202 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 150 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 204
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 205 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 244
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEISRLAPV-PNINGVVGHVSI 79
G YLH I+H D+K N LL+SK K+ DF +S V + +G
Sbjct: 133 GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 189
Query: 80 VVKGTHTQQLTEKSDIYGLGI 100
+ ++ EK D++ G+
Sbjct: 190 IAPEVLRKKYDEKCDVWSCGV 210
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 199
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 200 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
I+H D+K N LLD K+ DF +S +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNI 157
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 199
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 200 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 201
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF 110
+ LTEK SD++ LG I L GL F
Sbjct: 202 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 199
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 200 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 201
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 202 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 122 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 176
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 177 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 125 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 179
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 180 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 219
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 124 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 178
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 179 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 15 LHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVV 74
L + + E + YL ++ +H D+ A N L++ + KV DF +SR V
Sbjct: 123 LEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV 179
Query: 75 GHVSIVVKGTHTQ-----QLTEKSDIYGLGI 100
G V+ + + + + KSDI+ G+
Sbjct: 180 GS-KFPVRWSPPEVLMYSKFSSKSDIWAFGV 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV-- 198
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 199 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 123 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 177
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 178 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
L G+ Y+H I+H D+KA N L+ K+ DF ++R
Sbjct: 134 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
L G+ Y+H I+H D+KA N L+ K+ DF ++R
Sbjct: 134 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
L G+ Y+H I+H D+KA N L+ K+ DF ++R
Sbjct: 134 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 19 LGLA-EGILYLHTEADPPIIHWDIKATNTLLDS 50
LG A EG+ YLH+ I+H D+KA N LL S
Sbjct: 191 LGQALEGLEYLHSRR---ILHGDVKADNVLLSS 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
L G+ Y+H I+H D+KA N L+ K+ DF ++R
Sbjct: 133 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEIS-RLAPVPNINGVVGHVSI 79
GI Y+H I+H D+K N LL+SK ++ DF +S + +G
Sbjct: 138 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 194
Query: 80 VVKGTHTQQLTEKSDIYGLGI 100
+ EK D++ G+
Sbjct: 195 IAPEVLHGTYDEKCDVWSTGV 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 2 TSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI 61
+ RF V+ + L L YLH++ II+ D+K N LLD K+ DF
Sbjct: 100 SQRFPNPVAKFYAAEVCLALE----YLHSKD---IIYRDLKPENILLDKNGHIKITDFGF 152
Query: 62 SRLAP 66
++ P
Sbjct: 153 AKYVP 157
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 19 LGLA-EGILYLHTEADPPIIHWDIKATNTLLDS 50
LG A EG+ YLH+ I+H D+KA N LL S
Sbjct: 172 LGQALEGLEYLHSRR---ILHGDVKADNVLLSS 201
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 33 DPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVGHVSIVVKGT-------- 84
D I+H DIK+ N L T ++ DF I+R+ +N V ++ GT
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV-----LNSTV-ELARACIGTPYYLSPEI 196
Query: 85 -HTQQLTEKSDIYGLG 99
+ KSDI+ LG
Sbjct: 197 CENKPYNNKSDIWALG 212
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query: 1 MTSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVF 57
+ SR R S A R I + GI Y+H I+H D+K N LL+SK ++
Sbjct: 123 IISRKRFSEVDAAR--IIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRII 177
Query: 58 DFEIS-RLAPVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGI 100
DF +S + +G + EK D++ G+
Sbjct: 178 DFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGV 221
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEIS-RLAPVPNINGVVGHVSI 79
GI Y+H I+H D+K N LL+SK ++ DF +S + +G
Sbjct: 161 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 217
Query: 80 VVKGTHTQQLTEKSDIYGLGI 100
+ EK D++ G+
Sbjct: 218 IAPEVLHGTYDEKCDVWSTGV 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAP 66
+ L + E ++ L + IIH D+K N LLD + DF I+ + P
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEIS-RLAPVPNINGVVGHVSI 79
GI Y+H I+H D+K N LL+SK ++ DF +S + +G
Sbjct: 162 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 218
Query: 80 VVKGTHTQQLTEKSDIYGLGI 100
+ EK D++ G+
Sbjct: 219 IAPEVLHGTYDEKCDVWSTGV 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVFDFEISRLAPV-PNINGVVGHVSI 79
G YLH I+H D+K N LL+SK K+ DF +S V + +G
Sbjct: 116 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 172
Query: 80 VVKGTHTQQLTEKSDIYGLGI 100
+ ++ EK D++ G+
Sbjct: 173 IAPEVLRKKYDEKCDVWSCGV 193
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 129 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 183
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 184 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
I+H D+K N LLD K+ DF +S +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNI 162
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
I+H D+K N LLD K+ DF +S +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNI 161
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
I+H D+K N LLD K+ DF +S +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNI 156
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
I+H D+K N LLD K+ DF +S +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNI 152
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS-RLAPVPNINGVVG 75
I+H D+K N LLD K+ DF S +L P + V G
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 185
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 2 TSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI 61
RF+ ++ IA+GL +L ++ II+ D+K N +LDS+ K+ DF +
Sbjct: 115 VGRFKEPHAVFYAAEIAIGL----FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGM 167
Query: 62 SR 63
+
Sbjct: 168 CK 169
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEIS-RLAPVPNINGVVG 75
I+H D+K N LLD K+ DF S +L P + V G
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 172
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 27 YLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP---VPNINGVVGHVSIVVK 82
YLH + IIH D+K N LL+ ++ DF ++ L+P N VG V
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV-- 198
Query: 83 GTHTQQLTEK-----SDIYGLG--IACLYMGLYSF----EYL 113
+ LTEK SD++ LG I L GL F EYL
Sbjct: 199 --SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 24/101 (23%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF----EISRLAPVPNING 72
+ L + + YLH + +IH DIK+ + LL S K+ DF ++S+ VP
Sbjct: 146 VCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK--EVPKRKX 200
Query: 73 VVGH--------VSIVVKGTHTQQLTEKSDIYGLGIACLYM 105
+VG +S + GT DI+ LGI + M
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEV-------DIWSLGIMVIEM 234
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ + K+ DF +SR +
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMED 163
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 157
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 2 TSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEI 61
+F+ ++ I++GL +LH II+ D+K N +LDS+ K+ DF +
Sbjct: 114 VGKFKEPQAVFYAAEISIGL----FFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGM 166
Query: 62 SR 63
+
Sbjct: 167 CK 168
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 163
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 148 GLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 1 MTSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFE 60
RF+ ++ IA+GL +L ++ II+ D+K N +LDS+ K+ DF
Sbjct: 435 QVGRFKEPHAVFYAAEIAIGL----FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFG 487
Query: 61 ISR 63
+ +
Sbjct: 488 MCK 490
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 160
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKV 56
L +G+ YLH++ I+H DIK N LL + T K+
Sbjct: 118 LIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKI 150
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP--KVFDFEISR---LAPVPNIN-GVV 74
L G+ Y H + H D+K NTLLD P K+ DF S+ L P G
Sbjct: 124 LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 180
Query: 75 GHVS--IVVKGTHTQQLTEKSDIYGLGIACLYM--GLYSFE 111
+++ +++K + ++ +D++ G+ M G Y FE
Sbjct: 181 AYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGAYPFE 218
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
+IH D+K +N L++S KV DF ++R+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 157
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
+IH D+K +N L++S KV DF ++R+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISRL 64
+IH D+K +N L++S KV DF ++R+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP--KVFDFEISR---LAPVPNIN-GVV 74
L G+ Y H + H D+K NTLLD P K+ DF S+ L P G
Sbjct: 123 LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 179
Query: 75 GHVS--IVVKGTHTQQLTEKSDIYGLGIACLYM--GLYSFE 111
+++ +++K + ++ +D++ G+ M G Y FE
Sbjct: 180 AYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGAYPFE 217
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
+G+ YLH IH DIKA N LL+++ K+ DF ++
Sbjct: 136 KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 158
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 159
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 142 GLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 142 GLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3MVD|K Chain K, Crystal Structure Of The Chromatin Factor Rcc1 In Complex
With The Nucleosome Core Particle
pdb|3MVD|L Chain L, Crystal Structure Of The Chromatin Factor Rcc1 In Complex
With The Nucleosome Core Particle
Length = 423
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 59 FEISRLAPVPNINGVVGHVSIVVKGTHTQQLTEKSDIYGLGIACLYMGLYSFEYLKRFMS 118
E RL+PV G+ V I G H LT+ DIY G C G +
Sbjct: 63 LERKRLSPVA---GIPDAVDISAGGMHNLVLTKSGDIYSFG--CNDEG-----------A 106
Query: 119 LALKYCEDETKARPSMLEV 137
L ED ++++P ++++
Sbjct: 107 LGRDTSEDGSESKPDLIDL 125
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP 156
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
+G+ YLH +IH D+K N L+ K+ DF ++
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
+ +G+ Y+H IIH D+K N ++ K+ DF ++R A
Sbjct: 137 MLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA 178
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
+G+ YLH +IH D+K N L+ K+ DF ++
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
+G+ YLH +IH D+K N L+ K+ DF ++
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
+G+ YLH +IH D+K N L+ K+ DF ++
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 8 SVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR-LAP 66
S+ LA + A L+ + YL ++ +H DI A N L+ + K+ DF +SR +
Sbjct: 487 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
Query: 67 VPNINGVVGHVSI---VVKGTHTQQLTEKSDIYGLGIACLY 104
G + I + + ++ T SD++ G+ C++
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV-CMW 583
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDF----EISRLAPVPNINGVVGHVS 78
+ + YLH + +IH DIK+ + LL K+ DF +IS+ VP +VG
Sbjct: 152 QALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK--DVPKRKXLVGTPY 206
Query: 79 IVVKGTHTQQL-TEKSDIYGLGIACLYM 105
+ ++ L + DI+ LGI + M
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEM 234
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L G+ + H I+H D+K N L++S K+ DF ++R +P
Sbjct: 128 LLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 157 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 160 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 157 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 149 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L G+ + H I+H D+K N L++S K+ DF ++R +P
Sbjct: 128 LLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 144 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 149 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 156 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 156 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 166 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 157 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 15 LHIALGLAEGILYLHTE-----ADPPIIHWDIKATNTLLDSKFTPKVFDFEIS 62
L +A G+ +LHTE P I H D+K+ N L+ T + D ++
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 149 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 148 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 144 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 143 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 160 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 139 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 144 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 139 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP--KVFDFEISRLA-----PVPNINGV 73
L G+ Y H + H D+K NTLLD P K+ DF S+ + P + G
Sbjct: 124 LISGVSYAHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-GT 179
Query: 74 VGHVS--IVVKGTHTQQLTEKSDIYGLGIACLYM--GLYSFE 111
+++ +++K + ++ +D++ G+ M G Y FE
Sbjct: 180 PAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVMLVGAYPFE 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
L +G+ + H+ ++H D+K N L++++ K+ DF ++R VP
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 139 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 144 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 147 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 139 GLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 143 GLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 142 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 136 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
L G+ +LH+ ++H D+K N L+ S K+ DF ++R+
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 142 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 135 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 134 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 143 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
L G+ +LH+ ++H D+K N L+ S K+ DF ++R+
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 133 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 133 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRL 64
L G+ +LH+ ++H D+K N L+ S K+ DF ++R+
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 133 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 143 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 133 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLA 65
LA G+ +LH+ II+ D+K N LLD + K+ DF +S+ A
Sbjct: 139 LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEA 180
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF ++R
Sbjct: 134 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 36 IIHWDIKATNTLLDSKFTPKVFDFEISR 63
IIH D+K N LL+ + KV DF ++R
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 2 TSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVF 57
RF R L + L I L + E Y+H +H DIKA+N LL+ K +V+
Sbjct: 146 AKRFSRKTVLQLSLRI-LDILE---YIHEHE---YVHGDIKASNLLLNYKNPDQVY 194
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 17 IALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
I L G ++H IIH D+K N LL+ + K+ DF ++R
Sbjct: 136 ILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVP 68
GI + H+ IIH DIK N L+ K+ DF +R P
Sbjct: 136 GIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 2 TSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVF 57
RF R L + L I L + E Y+H +H DIKA+N LL+ K +V+
Sbjct: 146 AKRFSRKTVLQLSLRI-LDILE---YIHEHE---YVHGDIKASNLLLNYKNPDQVY 194
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 2 TSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVF 57
RF R L + L I L + E Y+H +H DIKA+N LL+ K +V+
Sbjct: 146 AKRFSRKTVLQLSLRI-LDILE---YIHEHE---YVHGDIKASNLLLNYKNPDQVY 194
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 16 HIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVG 75
++ + +G+ Y+H+ ++H D+K N ++ K+ DF ++R A VV
Sbjct: 130 YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 186
Query: 76 HV----SIVVKGTHTQQLTEKSDIYGLG 99
+++ H Q DI+ +G
Sbjct: 187 RWYRAPEVILSWMHYNQTV---DIWSVG 211
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 16 HIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISRLAPVPNINGVVG 75
++ + +G+ Y+H+ ++H D+K N ++ K+ DF ++R A VV
Sbjct: 148 YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVT 204
Query: 76 HV----SIVVKGTHTQQLTEKSDIYGLG 99
+++ H Q DI+ +G
Sbjct: 205 RWYRAPEVILSWMHYNQTV---DIWSVG 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 5 FRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
++ ++L + + +A+G+ +L A IH D+ A N LL K K+ DF ++R
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS--RLAPVPNINGVVG--- 75
+ E + +LH++ IIH D+KA N L+ + ++ DF +S L + + +G
Sbjct: 126 MLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY 182
Query: 76 HVSIVVKGTHTQQLTE---KSDIYGLGIACLYMG 106
++ V T + T K+DI+ LGI + M
Sbjct: 183 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ DF + R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 10 SLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSK 51
S A+ H + E + Y H D IIH D+K N LL SK
Sbjct: 128 SEAVASHYMRQILEALRYCH---DNNIIHRDVKPENVLLASK 166
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 1 MTSRFRRSVSLAMRLHIALGLAEGILYLHTEADPPIIHWDIKATNTLLDSKFTP---KVF 57
+ SR R S A R I + GI Y H I+H D+K N LL+SK ++
Sbjct: 117 IISRKRFSEVDAAR--IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRII 171
Query: 58 DFEIS 62
DF +S
Sbjct: 172 DFGLS 176
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 21 LAEGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS--RLAPVPNINGVVG--- 75
+ E + +LH++ IIH D+KA N L+ + ++ DF +S L + + +G
Sbjct: 118 MLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY 174
Query: 76 HVSIVVKGTHTQQLTE---KSDIYGLGIACLYMG 106
++ V T + T K+DI+ LGI + M
Sbjct: 175 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 26.6 bits (57), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS--RLAPVPNINGVVGH---- 76
+ + YLH D IIH D+KA N L K+ DF +S + + +G
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWM 202
Query: 77 --VSIVVKGTHTQQLTEKSDIYGLGIACLYMG 106
++ + + + K+D++ LGI + M
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 26.6 bits (57), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 24 GILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEISR 63
G+ Y+H+ AD IIH D+K +N ++ K+ D+ ++R
Sbjct: 137 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 23 EGILYLHTEADPPIIHWDIKATNTLLDSKFTPKVFDFEIS--RLAPVPNINGVVGH---- 76
+ + YLH D IIH D+KA N L K+ DF +S + + +G
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 77 --VSIVVKGTHTQQLTEKSDIYGLGIACLYMG 106
++ + + + K+D++ LGI + M
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,785,375
Number of Sequences: 62578
Number of extensions: 185056
Number of successful extensions: 1033
Number of sequences better than 100.0: 516
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 793
Number of HSP's gapped (non-prelim): 518
length of query: 176
length of database: 14,973,337
effective HSP length: 92
effective length of query: 84
effective length of database: 9,216,161
effective search space: 774157524
effective search space used: 774157524
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)