BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044324
(291 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VFE|A Chain A, Human Lactoferrin, N-terminal Lobe Mutant With Arg 121
Replaced By Ser (r121s)
Length = 333
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
+ AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RSTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
>pdb|2PMS|A Chain A, Crystal Structure Of The Complex Of Human Lactoferrin
N-Lobe And Lactoferrin-Binding Domain Of Pneumococcal
Surface Protein A
pdb|2PMS|B Chain B, Crystal Structure Of The Complex Of Human Lactoferrin
N-Lobe And Lactoferrin-Binding Domain Of Pneumococcal
Surface Protein A
Length = 344
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 6 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 65
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 66 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 120
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 121 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 177
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 178 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 216
>pdb|1EH3|A Chain A, R210k N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 6 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 65
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 66 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 120
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P D +G IE A + FFS C PG +G +C+G
Sbjct: 121 RRTAGWNVPIGTLR---PFLDWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 177
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF++ T
Sbjct: 178 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIKESTVF 216
>pdb|1HSE|A Chain A, H253m N Terminal Lobe Of Human Lactoferrin
Length = 334
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
>pdb|1LCT|A Chain A, Structure Of The Recombinant N-Terminal Lobe Of Human
Lactoferrin At 2.0 Angstroms Resolution
Length = 333
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSNPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
>pdb|1VFD|A Chain A, Human Lactoferrin, N-Terminal Lobe Mutant With Arg 121
Replaced By Glu (R121e)
Length = 330
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RETAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
>pdb|1L5T|A Chain A, Crystal Structure Of A Domain-Opened Mutant (R121d) Of The
Human Lactoferrin N-Lobe Refined From A Merohedrally-
Twinned Crystal Form.
pdb|1L5T|B Chain B, Crystal Structure Of A Domain-Opened Mutant (R121d) Of The
Human Lactoferrin N-Lobe Refined From A Merohedrally-
Twinned Crystal Form
Length = 332
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSQPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RDTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
>pdb|1DSN|A Chain A, D60s N-Terminal Lobe Human Lactoferrin
Length = 333
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L G
Sbjct: 5 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLSGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
>pdb|1H45|A Chain A, R210g N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 6 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 65
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 66 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 120
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P D +G IE A + FFS C PG +G +C+G
Sbjct: 121 RRTAGWNVPIGTLR---PFLDWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 177
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFV 264
G + S YF SGAF+CL + GD+AF+
Sbjct: 178 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFI 210
>pdb|1CB6|A Chain A, Structure Of Human Apolactoferrin At 2.0 A Resolution.
pdb|1BKA|A Chain A, Oxalate-Substituted Diferric Lactoferrin
Length = 691
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSQPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 398
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 399 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 454
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 455 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 503
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N++W
Sbjct: 504 CALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNEAW 562
Query: 283 S 283
+
Sbjct: 563 A 563
>pdb|2BJJ|X Chain X, Structure Of Recombinant Human Lactoferrin Produced In The
Milk Of Transgenic Cows
Length = 692
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 6 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 65
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 66 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 120
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 121 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 177
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 178 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 216
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 110/241 (45%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 344 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 399
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 400 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 455
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 456 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 504
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N +W
Sbjct: 505 CALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNDAW 563
Query: 283 S 283
+
Sbjct: 564 A 564
>pdb|1LFG|A Chain A, Structure Of Diferric Human Lactoferrin
Length = 691
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSNPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRESTVF 215
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 113/243 (46%), Gaps = 44/243 (18%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 398
Query: 122 AYTAFLNFSMKAIANEVYCDHAQSYD--------------AVAVINRKVCQENGGINLMD 167
YTA + + E Y AQS D AVAV+ R + +
Sbjct: 399 VYTAG-KCGLVPVLAENY-KSAQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNS 452
Query: 168 FKGHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGT 225
KG KSCH + AGWN P+ + T + FD +FS+ CAPG +
Sbjct: 453 VKGKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPAS 501
Query: 226 GMCSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQ 280
+C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N+
Sbjct: 502 NLCALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNE 560
Query: 281 SWS 283
+W+
Sbjct: 561 AWA 563
>pdb|1FCK|A Chain A, Structure Of Diceric Human Lactoferrin
Length = 692
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 6 SVQWCAVSNPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 65
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 66 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 120
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 121 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 177
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 178 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 216
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 344 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 399
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 400 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 455
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 456 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 504
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N++W
Sbjct: 505 CALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNEAW 563
Query: 283 S 283
+
Sbjct: 564 A 564
>pdb|1LFI|A Chain A, Metal Substitution In Transferrins: The Crystal Structure
Of Human Copper-lactoferrin At 2.1 Angstroms Resolution
Length = 691
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSNPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 398
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 399 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 454
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 455 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 503
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N++W
Sbjct: 504 CALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNEAW 562
Query: 283 S 283
+
Sbjct: 563 A 563
>pdb|1LFH|A Chain A, Molecular Replacement Solution Of The Structure Of
Apolactoferrin, A Protein Displaying Large-Scale
Conformational Change
Length = 691
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSNPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRESTVF 215
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 398
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 399 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 454
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 455 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 503
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N++W
Sbjct: 504 CALCIGDEEGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNEAW 562
Query: 283 S 283
+
Sbjct: 563 A 563
>pdb|1SQY|A Chain A, Structure Of Human Diferric Lactoferrin At 2.5a Resolution
Using Crystals Grown At Ph 6.5
Length = 691
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WC V + + C + + CVKRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCTVSNPEATKCFQWQRNMRRVRGPPVSCVKRDSPTQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 398
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 399 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 454
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 455 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGRDPRSNL 503
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N++W
Sbjct: 504 CALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNEAW 562
Query: 283 S 283
+
Sbjct: 563 A 563
>pdb|1LCF|A Chain A, Crystal Structure Of Copper-And Oxalate-Substituted Human
Lactoferrin At 2.0 Angstroms Resolution
Length = 691
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCAVSNPEATKCFQWQRNMRKVRGPPVSCLKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLKDGAGDVAFIRESTVF 215
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 398
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 399 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 454
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 455 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 503
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N++W
Sbjct: 504 CALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNEAW 562
Query: 283 S 283
+
Sbjct: 563 A 563
>pdb|1H43|A Chain A, R210e N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 6 SVQWCAVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 65
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 66 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 120
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 121 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 177
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+ T
Sbjct: 178 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIEESTVF 216
>pdb|1N76|A Chain A, Crystal Structure Of Human Seminal Lactoferrin At 3.4 A
Resolution
Length = 690
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WC V + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 4 SVQWCTVSQPEATKCFQWQRNMRRVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 63
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 64 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 118
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 119 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 175
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 176 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 214
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 110/241 (45%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 342 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 397
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 398 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 453
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 454 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 502
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N +W
Sbjct: 503 CALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNDAW 561
Query: 283 S 283
+
Sbjct: 562 A 562
>pdb|1B0L|A Chain A, Recombinant Human Diferric Lactoferrin
Length = 691
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WC V + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 5 SVQWCTVSQPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 65 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 120 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+R T
Sbjct: 177 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVF 215
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 40/241 (16%)
Query: 63 ATIKWCAVRDQ-YEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV +Q C + + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGEQELRKCNQWSGL----SEGSVTCSSASTTEDCIALVLKGEADAMSLDGGY 398
Query: 122 AYTAFLNFSMKAIANEVYCDHA------------QSYDAVAVINRKVCQENGGINLMDFK 169
YTA + +A + + Y AVAV+ R + + K
Sbjct: 399 VYTAGKCGLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR----SDTSLTWNSVK 454
Query: 170 GHKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
G KSCH + AGWN P+ + T + FD +FS+ CAPG + +
Sbjct: 455 GKKSCHTAVDRTAGWNIPMGLLFNQTGSCKFDE-----------YFSQSCAPGSDPRSNL 503
Query: 228 CSGC-GIENGS----CHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSW 282
C+ C G E G +SN Y+G +GAFRCL E GD+AFV+ D +L + +G N++W
Sbjct: 504 CALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVK-DVTVLQNTDGNNNEAW 562
Query: 283 S 283
+
Sbjct: 563 A 563
>pdb|1OQG|A Chain A, Crystal Structure Of The D63e Mutant Of The N-Lobe Human
Transferrin
Length = 337
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + LE
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLE 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1H44|A Chain A, R210l N-Terminal Lobe Human Lactoferrin
Length = 334
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 20/219 (9%)
Query: 64 TIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WCAV + + C + + C+KRD+ +C+ + + AD + L+ G
Sbjct: 6 SVQWCAVSQPEATKCFQWQRNMRKVRGPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 65
Query: 123 YTAFL-NFSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L + ++ +A EVY Q Y AVAV+ ++ G L + +G KSCH
Sbjct: 66 YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVV-----KKGGSFQLNELQGLKSCHTGL 120
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAPGEFEGT-----GMCSGC 231
AGWN P+ ++ P + +G IE A + FFS C PG +G +C+G
Sbjct: 121 RRTAGWNVPIGTLR---PFLNWTGPPEPIEAAVARFFSASCVPGADKGQFPNLCRLCAGT 177
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G + S YF SGAF+CL + GD+AF+ T
Sbjct: 178 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFILESTVF 216
>pdb|1OQH|A Chain A, Crystal Structure Of The R124a Mutant Of The N-lobe Human
Transferrin
Length = 337
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGASAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1N7X|A Chain A, Human Serum Transferrin, N-Lobe Y45e Mutant
Length = 331
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASELDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1RYO|A Chain A, Human Serum Transferrin, N-Lobe Bound With Oxalate
Length = 327
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1JQF|A Chain A, Human Transferrin N-Lobe Mutant H249q
Length = 334
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1FQF|A Chain A, Crystal Structures Of Mutant (K296a) That Abolish The
Dilysine Interaction In The N-Lobe Of Human Transferrin
Length = 331
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1N84|A Chain A, Human Serum Transferrin, N-Lobe
Length = 331
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1B3E|A Chain A, Human Serum Transferrin, N-Terminal Lobe, Expressed In
Pichia Pastoris
Length = 330
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 2 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 60
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 61 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 115
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 116 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 171
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 172 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 206
>pdb|1BP5|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|B Chain B, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|C Chain C, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BP5|D Chain D, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form
pdb|1BTJ|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form, Crystal Form 2
pdb|1BTJ|B Chain B, Human Serum Transferrin, Recombinant N-Terminal Lobe, Apo
Form, Crystal Form 2
Length = 337
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1DTG|A Chain A, Human Transferrin N-Lobe Mutant H249e
Length = 334
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1SUV|C Chain C, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1SUV|D Chain D, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1A8E|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe
pdb|1A8F|A Chain A, Human Serum Transferrin, Recombinant N-Terminal Lobe
Length = 329
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 3 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 61
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 62 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 116
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 117 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 172
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 173 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 207
>pdb|1D4N|A Chain A, Human Serum Transferrin
Length = 329
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 3 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 61
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 62 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 116
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 117 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 172
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 173 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKEST 207
>pdb|1N04|A Chain A, Diferric Chicken Serum Transferrin At 2.8 A Resolution.
pdb|1RYX|A Chain A, Crystal Structure Of Hen Serum Transferrin In Apo- Form
pdb|1AIV|A Chain A, Apo Ovotransferrin
pdb|1OVT|A Chain A, Refined Crystallographic Structure Of Hen Ovotransferrin
At 2.4 Angstroms Resolution
Length = 686
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 63 ATIKWCAVRDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+ I+WC + E + ++Q E + CV++ T +C+ + EAD I+L+ G A
Sbjct: 5 SVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAISLDGGQA 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQ----SYDAVAVINRKVCQENGGINLMDFKGHKSCHGS 177
+ A L + +K IA EVY +H + SY AVAV+ + + D +G SCH
Sbjct: 65 FEAGLAPYKLKPIAAEVY-EHTEGSTTSYYAVAVVKKGT-----EFTVNDLQGKTSCHTG 118
Query: 178 YSTAAGWNYPVNHI--KGSTP--TFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-G 232
+AGWN P+ + +G+ +SG + + + FFS C PG +C C G
Sbjct: 119 LGRSAGWNIPIGTLLHRGAIEWEGIESGSVE--QAVAKFFSASCVPGATIEQKLCRQCKG 176
Query: 233 IENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
C N+ Y G SGAF CL + GD+AFV+ T
Sbjct: 177 DPKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTV 213
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 111/223 (49%), Gaps = 40/223 (17%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
I+WCAV +D+ C+ S++S + +C D ++C+ KGEAD + L+ GL Y
Sbjct: 345 IQWCAVGKDEKSKCDRW-SVVSNGD---VECTVVDETKDCIIKIMKGEADAVALDGGLVY 400
Query: 124 TAFLNFSMKAIANEVYCDHAQ---------SYDAVAVINRKVCQENGGINLMDFKGHKSC 174
TA + + +A E Y D +Q SY AVAV +++ +N + KG KSC
Sbjct: 401 TAGVCGLVPVMA-ERYDDESQCSKTDERPASYFAVAV-----ARKDSNVNWNNLKGKKSC 454
Query: 175 HGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC- 231
H + AGW P+ I T T FD +FSE CAPG + +C C
Sbjct: 455 HTAVGRTAGWVIPMGLIHNRTGTCNFD-----------EYFSEGCAPGSPPNSRLCQLCQ 503
Query: 232 ---GIENGSC--HSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
GI C S+ YFG +GA RCLVE+ GD+AF++ T
Sbjct: 504 GSGGIPPEKCVASSHEKYFGYTGALRCLVEK-GDVAFIQHSTV 545
>pdb|2HAV|A Chain A, Apo-Human Serum Transferrin (Glycosylated)
pdb|2HAV|B Chain B, Apo-Human Serum Transferrin (Glycosylated)
Length = 676
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 2 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 60
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ +++ G + +G KSC
Sbjct: 61 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV-----KKDSGFQMNQLRGKKSC 115
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 116 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 171
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 172 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 206
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 64 TIKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 338 PVKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGF 392
Query: 122 AYTAFLNFSMKAIANEVY-----CDHAQS--YDAVAVINRKVCQENGGINLMDFKGHKSC 174
Y A + + E Y C+ Y AVAV+ + + + KG KSC
Sbjct: 393 VYIAG-KCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSA----SDLTWDNLKGKKSC 447
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GI 233
H + AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 448 HTAVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGS 498
Query: 234 ENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 499 GLNLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 538
>pdb|1D3K|A Chain A, Human Serum Transferrin
Length = 329
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 3 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 61
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 62 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 116
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 117 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 172
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 173 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVQHST 207
>pdb|3V83|A Chain A, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|B Chain B, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|C Chain C, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|D Chain D, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|E Chain E, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V83|F Chain F, The 2.1 Angstrom Crystal Structure Of Diferric Human
Transferrin
pdb|3V8X|B Chain B, The Crystal Structure Of Transferrin Binding Protein A
(Tbpa) From Neisserial Meningitidis Serogroup B In
Complex With Full Length Human Transferrin
Length = 698
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 24 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 82
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ +++ G + +G KSC
Sbjct: 83 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV-----KKDSGFQMNQLRGKKSC 137
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 138 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 193
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 194 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 228
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 64 TIKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 360 PVKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGF 414
Query: 122 AYTAFLNFSMKAIANEVY-----CDHAQS--YDAVAVINRKVCQENGGINLMDFKGHKSC 174
Y A + + E Y C+ Y AVAV+ + + + KG KSC
Sbjct: 415 VYIAG-KCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSA----SDLTWDNLKGKKSC 469
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GI 233
H + AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 470 HTAVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGS 520
Query: 234 ENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 521 GLNLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 560
>pdb|1NNT|A Chain A, Structural Evidence For A Ph-Sensitive Di-Lysine Trigger
In The Hen Ovotransferrin N-Lobe: Implications For
Transferrin Iron Release
Length = 328
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 63 ATIKWCAVRDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+ I+WC + E + ++Q E + CV++ T +C+ + EAD I+L+ G A
Sbjct: 1 SVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAISLDGGQA 60
Query: 123 YTAFL-NFSMKAIANEVYCDHAQ----SYDAVAVINRKVCQENGGINLMDFKGHKSCHGS 177
+ A L + +K IA EVY +H + SY AVAV+ + + D +G SCH
Sbjct: 61 FEAGLAPYKLKPIAAEVY-EHTEGSTTSYYAVAVVKKGT-----EFTVNDLQGKTSCHTG 114
Query: 178 YSTAAGWNYPVNHI--KGSTP--TFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-G 232
+AGWN P+ + +G+ +SG + + + FFS C PG +C C G
Sbjct: 115 LGRSAGWNIPIGTLLHRGAIEWEGIESGSVE--QAVAKFFSASCVPGATIEQKLCRQCKG 172
Query: 233 IENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
C N+ Y G SGAF CL + GD+AFV+ T
Sbjct: 173 DPKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTV 209
>pdb|3S9L|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 2
pdb|3S9L|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 2
pdb|3S9M|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 1
pdb|3S9M|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Cryocooled 1
pdb|3S9N|C Chain C, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Room Temperature
pdb|3S9N|D Chain D, Complex Between Transferrin Receptor 1 And Transferrin
With Iron In The N-Lobe, Room Temperature
Length = 693
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 19 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 77
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ +++ G + +G KSC
Sbjct: 78 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV-----KKDSGFQMNQLRGKKSC 132
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 133 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 188
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 189 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 223
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 64 TIKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 355 PVKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGF 409
Query: 122 AYTAFLNFSMKAIANEVY-----CDHAQS--YDAVAVINRKVCQENGGINLMDFKGHKSC 174
Y A + + E Y C+ + AVAV+ + + + KG KSC
Sbjct: 410 VYIAG-KCGLVPVLAENYDKSDNCEDTPEAGFFAVAVVKKSA----SDLTWDNLKGKKSC 464
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GI 233
H + AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 465 HTAVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGS 515
Query: 234 ENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 516 GLNLCEPNNKEGYYGFTGAFRCLVEK-GDVAFVKHQTV-------PQN 555
>pdb|4H0W|A Chain A, Bismuth Bound Human Serum Transferrin
Length = 679
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ +++ G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV-----KKDSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 64 TIKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 341 PVKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGF 395
Query: 122 AYTAFLNFSMKAIANEVY-----CDHAQS--YDAVAVINRKVCQENGGINLMDFKGHKSC 174
Y A + + E Y C+ Y A+AV+ + + + KG KSC
Sbjct: 396 VYIAG-KCGLVPVLAENYNKSDNCEDTPEAGYFAIAVVKKSA----SDLTWDNLKGKKSC 450
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GI 233
H + AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 451 HTAVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGS 501
Query: 234 ENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 502 GLNLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 541
>pdb|3VE1|B Chain B, The 2.9 Angstrom Crystal Structure Of Transferrin Binding
Protein B (Tbpb) From Serogroup B M982 Neisseria
Meningitidis In Complex With Human Transferrin
pdb|3VE1|D Chain D, The 2.9 Angstrom Crystal Structure Of Transferrin Binding
Protein B (Tbpb) From Serogroup B M982 Neisseria
Meningitidis In Complex With Human Transferrin
Length = 679
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ +++ G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV-----KKDSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 64 TIKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 341 PVKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGF 395
Query: 122 AYTAFLNFSMKAIANEVY-----CDHAQS--YDAVAVINRKVCQENGGINLMDFKGHKSC 174
Y A + + E Y C+ Y AVAV+ + + + KG KSC
Sbjct: 396 VYIAG-KCGLVPVLAENYDKSDNCEDTPEAGYFAVAVVKKSA----SDLTWDNLKGKKSC 450
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GI 233
H + AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 451 HTAVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGS 501
Query: 234 ENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 502 GLNLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 541
>pdb|3QYT|A Chain A, Diferric Bound Human Serum Transferrin
Length = 679
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ +++ G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV-----KKDSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 64 TIKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 341 PVKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGF 395
Query: 122 AYTAFLNFSMKAIANEVY-----CDHAQS--YDAVAVINRKVCQENGGINLMDFKGHKSC 174
Y A + + E Y C+ Y AVAV+ + + + KG KSC
Sbjct: 396 VYIAG-KCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSA----SDLTWDNLKGKKSC 450
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GI 233
H + AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 451 HTAVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGS 501
Query: 234 ENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 502 GLNLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 541
>pdb|1CE2|A Chain A, Structure Of Diferric Buffalo Lactoferrin At 2.5a
Resolution
Length = 689
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 63 ATIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV ++ + C+ SQ C T +C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGPEEQKKCQQW----SQQSGQIVTCATASTTDDCIALVLKGEADALSLDGGY 398
Query: 122 AYTAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGH 171
YTA + +A N H+ + Y AVAV+ + N G+ KG
Sbjct: 399 IYTAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKGK 454
Query: 172 KSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCS 229
KSCH + AGWN P+ I T + FD FFS+ CAPG + +C+
Sbjct: 455 KSCHTAVDRTAGWNIPMGLIANQTGSCAFDE-----------FFSQSCAPGADPKSRLCA 503
Query: 230 GC-----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
C G++ +S Y+G +GAFRCL E++GD+AFV+ DT
Sbjct: 504 LCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT 547
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
++WC + + ++ C + + + CV+R + EC+ + + +AD + L+ G+ +
Sbjct: 6 VRWCTISQPEWLKCHRWQWRMKKLGAPSITCVRRASVLECIRAITEKKADAVTLDGGMVF 65
Query: 124 TAFLN-FSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSYS 179
A + + ++ +A E+Y Y AVAV+ + L +G SCH
Sbjct: 66 EAGRDPYKLRPVAAEIYGTKESPQTHYYAVAVVKK-----GSNFQLDQLQGRNSCHTGLG 120
Query: 180 TAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAP-----GEFEGTGMCSGCGIE 234
+AGWN P+ ++ +S + +A FFS C P +C G G
Sbjct: 121 RSAGWNIPMGILRPYLSWTESLEPLQGAVAK-FFSASCVPCVDRQAYPNLCQLCKGEGEN 179
Query: 235 NGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
+C YFG SGAF+CL + GD+AFV+ T
Sbjct: 180 QCACSPREPYFGYSGAFKCLQDGAGDVAFVKETTVF 215
>pdb|1BIY|A Chain A, Structure Of Diferric Buffalo Lactoferrin
Length = 689
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 63 ATIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV ++ + C+ SQ C T +C+ KGEAD ++L+ G
Sbjct: 343 ARVVWCAVGPEEQKKCQQW----SQQSGQIVTCATASTTDDCIALVLKGEADALSLDGGY 398
Query: 122 AYTAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGH 171
YTA + +A N H+ + Y AVAV+ + N G+ KG
Sbjct: 399 IYTAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKGK 454
Query: 172 KSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCS 229
KSCH + AGWN P+ I T + FD FFS+ CAPG + +C+
Sbjct: 455 KSCHTAVDRTAGWNIPMGLIANQTGSCAFDE-----------FFSQSCAPGADPKSRLCA 503
Query: 230 GC-----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
C G++ +S Y+G +GAFRCL E++GD+AFV+ DT
Sbjct: 504 LCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT 547
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
++WC + + ++ C + + + CV+R EC+ + + +AD + L+ G+ +
Sbjct: 6 VRWCTISQPEWLKCHRWQWRMKKLGAPSITCVRRAFVLECIRAITEKKADAVTLDGGMVF 65
Query: 124 TAFLN-FSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSYS 179
A L+ + ++ +A E+Y Y AVAV+ + L +G SCH
Sbjct: 66 EAGLDPYKLRPVAAEIYGTKESPQTHYYAVAVVKK-----GSNFQLDQLQGRNSCHTGLG 120
Query: 180 TAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAP-----GEFEGTGMCSGCGIE 234
+AGWN P+ ++ +S + +A FFS C P +C G G
Sbjct: 121 RSAGWNIPMGILRPYLSWTESLEPLQGAVAK-FFSASCVPCVDRQAYPNLCQLCKGEGEN 179
Query: 235 NGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
+C YFG SGAF+CL + GD+AFV+ T
Sbjct: 180 QCACSPREPYFGYSGAFKCLQDGAGDVAFVKETTVF 215
>pdb|2O84|X Chain X, Crystal Structure Of K206e Mutant Of N-Lobe Human
Transferrin
Length = 337
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVEHST 209
>pdb|2O7U|B Chain B, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|A Chain A, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|C Chain C, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|D Chain D, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|E Chain E, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|F Chain F, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|G Chain G, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|H Chain H, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
pdb|2O7U|I Chain I, Crystal Structure Of K206eK296E MUTANT OF THE N-Terminal
Half Molecule Of Human Transferrin
Length = 337
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVEHST 209
>pdb|1FQE|A Chain A, Crystal Structures Of Mutant (K206a) That Abolish The
Dilysine Interaction In The N-Lobe Of Human Transferrin
Length = 331
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVAHST 209
>pdb|1NFT|A Chain A, Ovotransferrin, N-Terminal Lobe, Iron Loaded Open Form
pdb|1TFA|A Chain A, Ovotransferrin, N-Terminal Lobe, Apo Form
Length = 329
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 63 ATIKWCAVRDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+ I+WC V E + ++Q E + CV++ T +C+ + EAD I+L+ G
Sbjct: 2 SVIRWCTVSSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAISLDGGQV 61
Query: 123 YTAFL-NFSMKAIANEVYCDHAQ----SYDAVAVINRKVCQENGGINLMDFKGHKSCHGS 177
+ A L + +K IA EVY +H + SY AVAV+ + + D +G SCH
Sbjct: 62 FEAGLAPYKLKPIAAEVY-EHTEGSTTSYYAVAVVKKGT-----EFTVNDLQGKTSCHTG 115
Query: 178 YSTAAGWNYPVNHI--KGSTP--TFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-G 232
+AGWN P+ + +G+ +SG + + + FFS C PG +C C G
Sbjct: 116 LGRSAGWNIPIGTLIHRGAIEWEGIESGSVE--QAVAKFFSASCVPGATIEQKLCRQCKG 173
Query: 233 IENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
C N+ Y G SGAF CL + GD+AFV+ T
Sbjct: 174 DPKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTV 210
>pdb|2D3I|A Chain A, Crystal Structure Of Aluminum-Bound Ovotransferrin At 2.15
Angstrom Resolution
Length = 686
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 63 ATIKWCAVRDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+ I+WC + E + ++Q E + CV++ T +C+ + EAD I+L+ G
Sbjct: 5 SVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAISLDGGQV 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQ----SYDAVAVINRKVCQENGGINLMDFKGHKSCHGS 177
+ A L + +K IA EVY +H + SY AVAV+ + + D +G SCH
Sbjct: 65 FEAGLAPYKLKPIAAEVY-EHTEGSTTSYYAVAVVKKGT-----EFTVNDLQGKTSCHTG 118
Query: 178 YSTAAGWNYPVNHI--KGSTP--TFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-G 232
+AGWN P+ + +G+ +SG + + + FFS C PG +C C G
Sbjct: 119 LGRSAGWNIPIGTLIHRGAIEWEGIESGSVE--QAVAKFFSASCVPGATIEQKLCRQCKG 176
Query: 233 IENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
C N+ Y G SGAF CL + GD+AFV+ T
Sbjct: 177 DPKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTV 213
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 111/223 (49%), Gaps = 40/223 (17%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
I+WCAV +D+ C+ S++S + +C D ++C+ KGEAD + L+ GL Y
Sbjct: 345 IQWCAVGKDEKSKCDRW-SVVSNGD---VECTVVDETKDCIIKIMKGEADAVALDGGLVY 400
Query: 124 TAFLNFSMKAIANEVYCDHAQ---------SYDAVAVINRKVCQENGGINLMDFKGHKSC 174
TA + + +A E Y D +Q SY AVAV +++ +N + KG KSC
Sbjct: 401 TAGVCGLVPVMA-ERYDDESQCSKTDERPASYFAVAV-----ARKDSNVNWNNLKGKKSC 454
Query: 175 HGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC- 231
H + AGW P+ I T T FD +FSE CAPG + +C C
Sbjct: 455 HTAVGRTAGWVIPMGLIHNRTGTCNFD-----------EYFSEGCAPGSPPNSRLCQLCQ 503
Query: 232 ---GIENGSC--HSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
GI C S+ YFG +GA RCLVE+ GD+AF++ T
Sbjct: 504 GSGGIPPEKCVASSHEKYFGYTGALRCLVEK-GDVAFIQHSTV 545
>pdb|1IEJ|A Chain A, Ovotransferrin, N-Terminal Lobe, Holo Form, At 1.65 A
Resolution
Length = 332
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 63 ATIKWCAVRDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+ I+WC + E + ++Q E + CV++ T +C+ + EAD I L+ G
Sbjct: 5 SVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAITLDGGQV 64
Query: 123 YTAFL-NFSMKAIANEVYCDHAQ----SYDAVAVINRKVCQENGGINLMDFKGHKSCHGS 177
+ A L + +K IA EVY +H + SY AVAV+ + + D +G SCH
Sbjct: 65 FEAGLAPYKLKPIAAEVY-EHTEGSTTSYYAVAVVKKGT-----EFTVNDLQGKTSCHTG 118
Query: 178 YSTAAGWNYPVNHI--KGSTP--TFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-G 232
+AGWN P+ + +G+ +SG + + + FFS C PG +C C G
Sbjct: 119 LGRSAGWNIPIGTLLHRGAIEWEGIESGSVE--QAVAKFFSASCVPGATIEQKLCRQCKG 176
Query: 233 IENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
C N+ Y G SGAF CL + GD+AFV+ T
Sbjct: 177 DPKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTTV 213
>pdb|1N7W|A Chain A, Crystal Structure Of Human Serum Transferrin, N-Lobe L66w
Mutant
Length = 331
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AG Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 AGWVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 209
>pdb|1IQ7|A Chain A, Ovotransferrin, C-Terminal Lobe, Apo Form
Length = 345
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 110/223 (49%), Gaps = 40/223 (17%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
I+WCAV +D+ C+ S++S + +C D ++C+ KGEAD + L+ GL Y
Sbjct: 4 IQWCAVGKDEKSKCDRW-SVVSNGD---VECTVVDETKDCIIKIMKGEADAVALDGGLVY 59
Query: 124 TAFLNFSMKAIANEVYCDHAQ---------SYDAVAVINRKVCQENGGINLMDFKGHKSC 174
TA + + + E Y D +Q SY AVAV +++ +N + KG KSC
Sbjct: 60 TAGV-CGLVPVMAERYDDESQCSKTDERPASYFAVAVA-----RKDSNVNWNNLKGKKSC 113
Query: 175 HGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC- 231
H + AGW P+ I T T FD +FSE CAPG + +C C
Sbjct: 114 HTAVGRTAGWVIPMGLIHNRTGTCNFD-----------EYFSEGCAPGSPPNSRLCQLCQ 162
Query: 232 ---GIENGSC--HSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
GI C S+ YFG +GA RCLVE+ GD+AF++ T
Sbjct: 163 GSGGIPPEKCVASSHEKYFGYTGALRCLVEK-GDVAFIQHSTV 204
>pdb|1BLF|A Chain A, Structure Of Diferric Bovine Lactoferrin At 2.8 Angstroms
Resolution
Length = 689
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 37/222 (16%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV ++ + C+ SQ C T +C+ KGEAD +NL+ G Y
Sbjct: 345 VVWCAVGPEEQKKCQQW----SQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIY 400
Query: 124 TAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGHKS 173
TA + +A N H+ + Y AVAV+ + N G+ K KS
Sbjct: 401 TAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKDKKS 456
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH + AGWN P+ I T + FD FFS+ CAPG + +C+ C
Sbjct: 457 CHTAVDRTAGWNIPMGLIVNQTGSCAFDE-----------FFSQSCAPGADPKSRLCALC 505
Query: 232 -----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
G++ +S Y+G +GAFRCL E++GD+AFV+ DT
Sbjct: 506 AGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT 547
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
++WC + + ++ C + + + CV+R A EC+ + + +AD + L+ G+ +
Sbjct: 6 VRWCTISQPEWFKCRRWQWRMKKLGAPSITCVRRAFALECIRAIAEKKADAVTLDGGMVF 65
Query: 124 TAFLN-FSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSYS 179
A + + ++ +A E+Y Y AVAV+ ++ L +G KSCH
Sbjct: 66 EAGRDPYKLRPVAAEIYGTKESPQTHYYAVAVV-----KKGSNFQLDQLQGRKSCHTGLG 120
Query: 180 TAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAP-----GEFEGTGMCSGCGIE 234
+AGW P+ ++ +S + +A FFS C P +C G G
Sbjct: 121 RSAGWIIPMGILRPYLSWTESLEPLQGAVAK-FFSASCVPCIDRQAYPNLCQLCKGEGEN 179
Query: 235 NGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
+C S YFG SGAF+CL + GD+AFV+ T
Sbjct: 180 QCACSSREPYFGYSGAFKCLQDGAGDVAFVKETTVF 215
>pdb|1AOV|A Chain A, Apo Duck Ovotransferrin
pdb|1DOT|A Chain A, Crystallographic Structure Of Duck Ovotransferrin At 2.3
Angstroms Resolution
Length = 686
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 113/241 (46%), Gaps = 37/241 (15%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
I+WCAV +D+ C+ S++S E +C D ++C+ KGEAD I+L+ G Y
Sbjct: 345 IQWCAVGKDEKSKCDRW-SVVSNGE---VECTILDDNKDCIVKITKGEADAISLDGGFVY 400
Query: 124 TAFLNFSMKAIANEVYCDHAQS---------YDAVAVINRKVCQENGGINLMDFKGHKSC 174
TA + + + E Y D Q Y AVAV+ + + I + +G KSC
Sbjct: 401 TAGV-CGLVPVVGESYEDETQCSKDEEQPAYYFAVAVVKK-----SSAITWNNLQGKKSC 454
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGCG-- 232
H + AGWN P+ I T + D +FSE CAPG + +C C
Sbjct: 455 HTAVGRTAGWNIPMGLIHNKTGSCD---------FDDYFSEGCAPGSPPNSRLCKLCQGS 505
Query: 233 ----IENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWSSKSVR 288
+E S+ Y+G +GA RCLVE+ GD+AF++ T + + G W+ R
Sbjct: 506 GENLLEKCVASSHEKYYGYTGALRCLVEQ-GDVAFIKHST-VGENVSGSNKDDWAKGLTR 563
Query: 289 D 289
D
Sbjct: 564 D 564
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 63 ATIKWCAVRDQYED-CEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
T++WC + E C L + Q E T CV++ T +C+ + EAD I+L+ G
Sbjct: 5 TTVRWCTISSAEEKKCNSLKDHMQQ-ERVTLSCVQKATYLDCIKAISNNEADAISLDGGQ 63
Query: 122 AYTAFL-NFSMKAIANEVY---CDHAQSYDAVAVINRKVCQENGGINLM--DFKGHKSCH 175
+ A L + +K IA EVY SY AVAV+ + G + M D +G SCH
Sbjct: 64 VFEAGLAPYKLKPIAAEVYERSGGSTTSYYAVAVVKK-------GTDFMIKDLRGKTSCH 116
Query: 176 GSYSTAAGWNYPVNHIKGSTPTFDSGKISDI--EIASSFFSEVCAPGEFEGTGMCSGC-G 232
+AGWN P+ + G S I + + FFS C PG +C C G
Sbjct: 117 TGLGRSAGWNIPIGTLIHREDIEWEGIESGISEQAVAKFFSASCVPGATIEQKLCRQCKG 176
Query: 233 IENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTA 269
C N Y G SGAF+CL + GD+AFV+ T
Sbjct: 177 DAKTKCLRNGPYSGYSGAFQCLKDGKGDVAFVKHTTV 213
>pdb|1JW1|A Chain A, Crystallization And Structure Determination Of Goat
Lactoferrin At 4.0 Resolution: A New Form Of Packing In
Lactoferrins With A High Solvent Content In Crystals
Length = 689
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 37/222 (16%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV ++ C+ S+ C T +C+ KGEAD ++L+ G Y
Sbjct: 345 VVWCAVGPEEQSKCQQW----SEQSGQNVTCATASTTDDCIALVLKGEADALSLDGGYIY 400
Query: 124 TAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGHKS 173
TA + +A N H+ + Y AVAV+ + N G+ KG KS
Sbjct: 401 TAGKCGLVPVMAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKGKKS 456
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH + AGWN P+ I T + FD FFS+ CAPG + +C+ C
Sbjct: 457 CHTAVDRTAGWNIPMGLIANQTGSCAFDE-----------FFSQSCAPGADPKSSLCALC 505
Query: 232 -----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
G++ +S Y+G +GAFRCL E++GD+AFV+ DT
Sbjct: 506 AGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT 547
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 65 IKWCAVR-DQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
++WCA+ ++ C + + + CV+R + EC+ + AD + L+ G+ +
Sbjct: 6 VRWCAISLPEWSKCYQWQRRMRKLGAPSITCVRRTSVLECIRAIAGKNADAVTLDDGMVF 65
Query: 124 TAFLN-FSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSYS 179
A + + ++ +A E+Y Y AVAV+ ++ L +G KSCH
Sbjct: 66 EAGRDPYKLRPVAAEIYGTEKSPQTHYYAVAVV-----KKGSNFKLDQLQGQKSCHMGLG 120
Query: 180 TAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MCSGCGI 233
+AGWN PV ++ +S + +A FFS C P +G +C G G
Sbjct: 121 RSAGWNIPVGILRPPLSWTESAEPLQGAVAR-FFSASCVPC-VDGKAYPNLCQLCKGVGE 178
Query: 234 ENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
+C S YFG SGAF+CL + GD+AFV+ T
Sbjct: 179 NKCACSSQEPYFGYSGAFKCLQDGAGDVAFVKETTVF 215
>pdb|1SDX|A Chain A, Crystal Structure Of The Zinc Saturated C-Terminal Half Of
Bovine Lactoferrin At 2.0 A Resolution Reveals Two
Additional Zinc Binding Sites
pdb|3TOD|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With 1- Butyl-1h-Pyrazole-5-Carboxylic Acid At
1.38 A Resolution
pdb|3U72|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Isoniazid At 2.2 A Resolution
pdb|3U8Q|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Phenyl-Propanolamine At 1.97 A Resolution
pdb|3UGW|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Deoxycytidine At 1.87 A Resolution
pdb|3UK4|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With 1,2, 5-Pentanetriol At 1.98 A Resolution
pdb|3USD|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Imidazol (1,2 A) Pyridine3-Yl-Acitic Acid
At 2.4 A Resolution
pdb|3V5A|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Gamma Amino Butyric Acid At 1.44 A
Resolution
pdb|3VDF|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Diaminopimelic Acid At 1.46 A Resolution
pdb|4DIG|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With N- Acetylmuramyl L-Alanyl D-Isoglutamine
At 1.8 A Resolution
pdb|4DXU|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Aminocaproic Acid At 1.46 A Resolution
pdb|4FIM|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Celecoxib Acid At 1.80 A Resolution
pdb|4FJP|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Naproxen At 1.68 A Resolution
pdb|4FOR|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Flurbiprofen At 1.58 A Resolution
pdb|4G2Z|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Mefenamic Acid At 1.90 A Resolution
pdb|4GRK|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Ketorolac At 1.68 A Resolution
Length = 335
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 38/243 (15%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV ++ + C+ SQ C T +C+ KGEAD +NL+ G Y
Sbjct: 4 VVWCAVGPEEQKKCQQW----SQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIY 59
Query: 124 TAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGHKS 173
TA + +A N H+ + Y AVAV+ + N G+ K KS
Sbjct: 60 TAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKDKKS 115
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH + AGWN P+ I T + FD FFS+ CAPG + +C+ C
Sbjct: 116 CHTAVDRTAGWNIPMGLIVNQTGSCAFDE-----------FFSQSCAPGADPKSRLCALC 164
Query: 232 -----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWSSKS 286
G++ +S Y+G +GAFRCL E++GD+AFV+ DT + + G W+
Sbjct: 165 AGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT-VWENTNGESTADWAKNL 223
Query: 287 VRD 289
R+
Sbjct: 224 KRE 226
>pdb|2P1S|A Chain A, Crystal Structure Of The C-Terminal Lobe Of Bovine
Lactoferrin Complexed With O-Alpha-D-Glucopyranosyl-(1
3)-Alpha-D- Fructofuranosyl- (2 1)-
Alpha-D-Glucopyranoside At 1.93 A Resolution
Length = 344
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 38/243 (15%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV ++ + C+ SQ C T +C+ KGEAD +NL+ G Y
Sbjct: 4 VVWCAVGPEEQKKCQQW----SQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIY 59
Query: 124 TAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGHKS 173
TA + +A N H+ + Y AVAV+ + N G+ K KS
Sbjct: 60 TAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKDKKS 115
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH + AGWN P+ I T + FD FFS+ CAPG + +C+ C
Sbjct: 116 CHTAVDRTAGWNIPMGLIVNQTGSCAFDE-----------FFSQSCAPGADPKSRLCALC 164
Query: 232 -----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWSSKS 286
G++ +S Y+G +GAFRCL E++GD+AFV+ DT + + G W+
Sbjct: 165 AGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT-VWENTNGESTADWAKNL 223
Query: 287 VRD 289
R+
Sbjct: 224 KRE 226
>pdb|1NKX|A Chain A, Crystal Structure Of A Proteolytically Generated
Functional Monoferric C-Lobe Of Bovine Lactoferrin At
1.9a Resolution
pdb|2ALU|A Chain A, Detection Of New Binding Site In The C-Terminal Lobe Of
Lactoferrin:crystal Structure Of The Complex Formed
Between Bovine Lactoferrin And A Tetrasaccharide At 2.1a
Resolution
pdb|2AYS|A Chain A, A Conserved Non-Metallic Binding Site In The C-Terminal
Lobe Of Lactoferrin: Structure Of The Complex Of
C-Terminal Lobe Of Bovine Lactoferrin With N-Acetyl
Galactosamine At 1.86 A Resolution
pdb|2Q8J|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Mannitol And Mannose At 2.7 A
Resolution
pdb|2QJE|A Chain A, Crystal Structure Of The Complex Of Bovine C-Lobe With
Amygdalin At 2.3a Resolution
Length = 348
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 38/243 (15%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV ++ + C+ SQ C T +C+ KGEAD +NL+ G Y
Sbjct: 4 VVWCAVGPEEQKKCQQW----SQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIY 59
Query: 124 TAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGHKS 173
TA + +A N H+ + Y AVAV+ + N G+ K KS
Sbjct: 60 TAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKDKKS 115
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH + AGWN P+ I T + FD FFS+ CAPG + +C+ C
Sbjct: 116 CHTAVDRTAGWNIPMGLIVNQTGSCAFDE-----------FFSQSCAPGADPKSRLCALC 164
Query: 232 -----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWSSKS 286
G++ +S Y+G +GAFRCL E++GD+AFV+ DT + + G W+
Sbjct: 165 AGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT-VWENTNGESTADWAKNL 223
Query: 287 VRD 289
R+
Sbjct: 224 KRE 226
>pdb|2HAU|A Chain A, Apo-Human Serum Transferrin (Non-Glycosylated)
pdb|2HAU|B Chain B, Apo-Human Serum Transferrin (Non-Glycosylated)
Length = 676
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 114/220 (51%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ + S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 2 TVRWCAVSEHEATKCQSFRDHXKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 60
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
AGL Y A+L ++K + E Y D Y AVAV+ +++ G +G KSC
Sbjct: 61 AGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV-----KKDSGFQXNQLRGKKSC 115
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 116 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 171
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV+ T
Sbjct: 172 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVKHST 206
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 108/235 (45%), Gaps = 53/235 (22%)
Query: 64 TIKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD +L+ G
Sbjct: 338 PVKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIXNGEADAXSLDGGF 392
Query: 122 AYTAFLNFSMKAIANEVY-----CDHAQS--YDAVAVINRKVCQENGGINLMDFKGHKSC 174
Y A + + E Y C+ Y AVAV+ + + + KG KSC
Sbjct: 393 VYIAG-KCGLVPVLAENYDKSDNCEDTPEAGYFAVAVVKKSA----SDLTWDNLKGKKSC 447
Query: 175 HGSYSTAAGWNYP-------VNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGM 227
H + AGWN P +NH + FD FFSE CAPG + + +
Sbjct: 448 HTAVGRTAGWNIPXGLLYNKINHCR-----FD-----------EFFSEGCAPGSKKDSSL 491
Query: 228 CSGC-GIENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C C G C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 492 CKLCXGSGLNLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 538
>pdb|2B65|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Maltose At 1.5a Resolution
pdb|2FA7|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoferrin
C-Lobe With A Pentasaccharide At 2.38 A Resolution
pdb|2DOJ|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Adenosine At 2.4 A Resolution
pdb|2DP8|A Chain A, Carbohydrate Recognition By Lactoferrin: Crystal Structure
Of The Complex Of C-Terminal Lobe Of Bovine Lactoferrin
With Trisaccharide At 2.5 A Resolution
pdb|2G93|A Chain A, Ligand Recognition Site In C-Lobe Of Lactoferrin: Crystal
Structure Of The Complex Of C-Lobe Of Bovine Lactoferrin
With Methyl Alpha-D- Mannopyranoside At 1.9 A Resolution
pdb|2H4I|A Chain A, Crystal Structure Of The Complex Of Proteolytically
Produced C- Terminal Half Of Bovine Lactoferrin With
Lactose At 2.55 A Resolution
pdb|2HCA|A Chain A, Crystal Structure Of Bovine Lactoferrin C-Lobe Liganded
With Glucose At 2.8 A Resolution
pdb|2DQV|A Chain A, Structure Of The C-Terminal Lobe Of Bovine Lactoferrin In
Complex With Galactose At 2.7 A Resolution
pdb|2DS9|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Mannose At 2.8 A Resolution
pdb|2DSF|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Xylose At 2.8a Resolution
pdb|2DVC|A Chain A, Structure Of The Bovine Lactoferrin C-Lobe Complex With
Sucrose At 3.0 A Resolution
pdb|2DWA|A Chain A, Structure Of The Complex Of Lactoferrin C-Terminal Half
With Fucose At 2.07 A Resolution
pdb|2DWH|A Chain A, Crystal Structure Of N-Acetylglucosamine Complex Of Bovine
Lactoferrin C-Lobe At 2.8 A Resolution
pdb|2DWI|A Chain A, Crystal Structure Of The Complex Formed Between C-Terminal
Half Of Bovine Lactoferrin And Cellobiose At 2.2 A
Resolution
pdb|2DWJ|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Raffinose At 2.3 A Resolution
pdb|2DXR|A Chain A, Crystal Structure Of The Complex Formed Between C-Terminal
Half Of Bovine Lactoferrin And Sorbitol At 2.85 A
Resolution
pdb|2DXY|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Trehalose At 2.0 A Resolution
pdb|2DYX|A Chain A, Structure Of The Complex Of Lactoferrin C-lobe With
Melibiose At 2.0 A Resolution
pdb|2E0S|A Chain A, Carbohydrate Recognition Of C-Terminal Half Of
Lactoferrin: Crystal Structure Of The Complex Of C-Lobe
With Rhamnose At 2.15 A Resolution
pdb|2E1S|A Chain A, Crystal Structure Of The Complex Of C-Terminal Half Of
Bovine Lactoferrin And Arabinose At 2.7 A Resolution
pdb|2NWJ|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With Disaccharide At 1.75 A Resolution
pdb|2NUV|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Atenolol At 2.25 A Resolution
pdb|2O1L|A Chain A, Structure Of A Complex Of C-terminal Lobe Of Bovine
Lactoferrin With Disaccharide At 1.97 A Resolution
pdb|2O51|A Chain A, Crystal Structure Of Bovine C-Lobe With Fructose At 3.0 A
Resolution
pdb|2OCU|A Chain A, Structure Of The Complex Of C-Terminal Lobe Of Bovine
Lactoferrin With N-(4-Hydroxyphenyl) Acetamide At 2.38 A
Resolution
pdb|2PX1|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoferrin
C-Lobe With Ribose At 2.5 A Resolution
pdb|2R71|A Chain A, Crystal Structure Of The Complex Of Bovine C-lobe With
Inositol At 2.1a Resolution
pdb|2R9J|A Chain A, Ligand Recognition In C-Lobe: The Crystal Structure Of The
Complex Of Lactoferrin C-Lobe With Nicotinamide At 2.5 A
Resolution
pdb|3CFL|A Chain A, Crystal Structure Of The Complex Formed Between C-lobe Of
Bovine Lactoferrin And
5-chloro-6'-methyl-3-[4-(methylsulfonyl)phenyl]-2,3'-
Bipyridine At 2.25 A Resolution
pdb|3CI8|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Vitamin B3 (Niacin) At 2.4 A Resolution
pdb|3CRB|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With 2- Chromenone At 2.6 A Resolution
pdb|2ZMB|A Chain A, Crystal Structure Of The Complex Of C-Terminal Lobe Of
Bovine Lactoferrin With Parecoxib At 2.9 A Resolution
pdb|3E9X|A Chain A, Crystal Structure Of The Complex Of C-lobe Of Lactoferrin
With Nimesulide At 2.7 A Resolution
pdb|3IB2|A Chain A, Structure Of The Complex Of C-Terminal Half (C-Lobe) Of
Bovine Lactoferrin With Alpha-Methyl-4-(2-Methylpropyl)
Benzene Acetic Acid
pdb|3IAZ|A Chain A, Structural Basis Of The Prevention Of Nsaid-induced Damage
Of The Gastrointestinal Tract By C-terminal Half
(c-lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of The C-lobe Complex
With Aspirin
pdb|3IB0|A Chain A, Structural Basis Of The Prevention Of Nsaid-Induced Damage
Of The Gastrointestinal Tract By C-Terminal Half
(C-Lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of C- Lobe Complex With
Diclofenac
pdb|3IB1|A Chain A, Structural Basis Of The Prevention Of Nsaid-Induced Damage
Of The Gastrointestinal Tract By C-Terminal Half
(C-Lobe) Of Bovine Colostrum Protein Lactoferrin:
Binding And Structural Studies Of C- Lobe Complex With
Indomethacin
pdb|3K0V|A Chain A, Removal Of Sugars And Sugars-Like Molecules From The
Solution By C- Lobe Of Lactoferrin: Crystal Structure Of
The Complex Of C-Lobe With
Beta-D-Glucopyranosyl-(1->4)-Beta-D-Galactopyranosyl-(1-
>4)-Alpha-D- Glucopyranose At 1.9 A Resolution
pdb|3KJ7|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Bovine
Lactoferrin With Dextrin At 1.9 A Resolution
pdb|3MJN|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Isopropylamino-3-(1-Naphthyloxy)propan-2-Ol At 2.38
A Resolution
pdb|3O97|A Chain A, Crystal Structure Of The Complex Of C-Lobe Of Lactoferrin
With Indole Acetic Acid At 2.68 A Resolution
pdb|3RGY|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lipopolysaccharide At 2.0 A Resolution
pdb|3SDF|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lipoteichoic Acid At 2.1 A Resolution
pdb|3TAJ|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Nabumetone At 1.7a Resolution
pdb|3TTR|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Lidocaine At 2.27 A Resolution
pdb|3TUS|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Meta- Hydroxy Benzoic Acid At 2.5 A
Resolution
pdb|4G77|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Tolfenamic Acid At 1.98 A Resolution
pdb|4G8H|A Chain A, Crystal Structure Of C-Lobe Of Bovine Lactoferrin
Complexed With Licofelone At 1.88 A Resolution
Length = 345
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 38/243 (15%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV ++ + C+ SQ C T +C+ KGEAD +NL+ G Y
Sbjct: 4 VVWCAVGPEEQKKCQQW----SQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIY 59
Query: 124 TAFLNFSMKAIA-NEVYCDHA---------QSYDAVAVINRKVCQENGGINLMDFKGHKS 173
TA + +A N H+ + Y AVAV+ + N G+ K KS
Sbjct: 60 TAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK----ANEGLTWNSLKDKKS 115
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH + AGWN P+ I T + FD FFS+ CAPG + +C+ C
Sbjct: 116 CHTAVDRTAGWNIPMGLIVNQTGSCAFDE-----------FFSQSCAPGADPKSRLCALC 164
Query: 232 -----GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWSSKS 286
G++ +S Y+G +GAFRCL E++GD+AFV+ DT + + G W+
Sbjct: 165 AGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDT-VWENTNGESTADWAKNL 223
Query: 287 VRD 289
R+
Sbjct: 224 KRE 226
>pdb|3FGS|A Chain A, Crystal Structure Of G65rK206E DOUBLE MUTANT OF THE N-Lobe
Human Transferrin
Length = 337
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 30/220 (13%)
Query: 64 TIKWCAVRD-QYEDCE----YLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLE 118
T++WCAV + + C+ ++ S+I S+ + CVK+ + +C+ + EAD + L+
Sbjct: 5 TVRWCAVSEHEATKCQSFRDHMKSVIP-SDGPSVACVKKASYLDCIRAIAANEADAVTLD 63
Query: 119 AGLAYTAFL-NFSMKAIANEVYC---DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSC 174
A L Y A+L ++K + E Y D Y AVAV+ + + G + +G KSC
Sbjct: 64 ARLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKK-----DSGFQMNQLRGKKSC 118
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTG------MC 228
H +AGWN P+ + P + K + +A+ FFS CAP +GT +C
Sbjct: 119 HTGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAN-FFSGSCAPCA-DGTDFPQLCQLC 174
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
GCG C + + YFG SGAF+CL + GD+AFV T
Sbjct: 175 PGCG-----CSTLNQYFGYSGAFKCLKDGAGDVAFVEHST 209
>pdb|1DTZ|A Chain A, Structure Of Camel Apo-Lactoferrin Demonstrates Its Dual
Role In Sequestering And Transporting Ferric Ions
Simultaneously:crystal Structure Of Camel
Apo-Lactoferrin At 2.6a Resolution.
pdb|1I6Q|A Chain A, Formation Of A Protein Intermediate And Its Trapping By
The Simultaneous Crystallization Process: Crystal
Structure Of An Iron-Saturated Intermediate In The Fe3+
Binding Pathway Of Camel Lactoferrin At 2.7 Resolution
Length = 689
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WC + + C + + + CVK+ + EC+ + +AD + L+ GL
Sbjct: 5 SVRWCTTSPAESKKCAQWQRRMKKVRGPSVTCVKKTSRFECIQAISTEKADAVTLDGGLV 64
Query: 123 YTAFLN-FSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L+ + ++ IA EVY Q Y AVA+ + L +G KSCH
Sbjct: 65 YDAGLDPYKLRPIAAEVYGTENQPQTHYYAVAIAKKGT-----NFQLNQLQGLKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAP----GEFEGT-GMCSGC 231
+AGWN P+ ++ P D +G ++ A + FFS C P E+ +C+G
Sbjct: 120 GRSAGWNIPMGLLR---PFLDWTGPPEPLQKAVAKFFSASCVPCVDGKEYPNLCQLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
G +C S YFG SGAF+CL + GD+AFV+ T
Sbjct: 177 GENKCACSSQEPYFGYSGAFKCLQDGAGDVAFVKDSTVF 215
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 113/237 (47%), Gaps = 34/237 (14%)
Query: 63 ATIKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGL 121
A + WCAV D+ C+ S+ + + C T ++C+ KGEAD ++L+ G
Sbjct: 343 AQVVWCAVGSDEQLKCQEW----SRQSNQSVVCATASTTEDCIALVLKGEADALSLDGGY 398
Query: 122 AYTAFLNFSMKAIANE--------VYCDH--AQSYDAVAVINRKVCQENGGINLMDFKGH 171
Y A + +A + C H + Y AVAV+ + N I +G
Sbjct: 399 IYIAGKCGLVPVLAESQQSPESSGLDCVHRPVKGYLAVAVVRK----ANDKITWNSLRGK 454
Query: 172 KSCHGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
KSCH + AGWN P+ + T DS + + FFS+ CAPG + +C+ C
Sbjct: 455 KSCHTAVDRTAGWNIPMGPLFKDT---DSCRFDE------FFSQSCAPGSDPRSKLCALC 505
Query: 232 -GIENG--SCHSNS--LYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWS 283
G E G C NS +G +GAFRCL E +GD+AFV+ D +L + +G + W+
Sbjct: 506 AGNEEGQLKCVPNSSERLYGYTGAFRCLAENVGDVAFVK-DVTVLDNTDGKGTEQWA 561
>pdb|1B1X|A Chain A, Structure Of Diferric Mare Lactoferrin At 2.62a Resolution
pdb|1B7Z|A Chain A, Structure Of Oxalate Substituted Diferric Mare Lactoferrin
From Colostrum
pdb|1B7U|A Chain A, Structure Of Mare Apolactoferrin: The N And C Lobes Are In
The Closed Form
pdb|1QJM|A Chain A, Crystal Structure Of A Complex Of Lactoferrin With A
Lanthanide Ion (Sm3+) At 3.4 Anstrom Resolution
pdb|1I6B|A Chain A, Structure Of Equine Apolactoferrin At 3.2 A Resolution
Using Crystals Grown At 303k
pdb|3CR9|A Chain A, Crystal Structure Of The Complex Of Lactoferrin With 6-
(Hydroxymethyl)oxane-2,3,4,5-Tetrol At 3.49 A Resolution
Length = 689
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WC + + C + + + C+++ ++ EC+ + +AD + L+ GL
Sbjct: 5 SVRWCTISPAEAAKCAKFQRNMKKVRGPSVSCIRKTSSFECIQAIAANKADAVTLDGGLV 64
Query: 123 YTAFLN-FSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L+ + ++ +A EVY + Y AVAV+ ++ G L +G KSCH
Sbjct: 65 YEAGLHPYKLRPVAAEVYQTRGKPQTRYYAVAVV-----KKGSGFQLNQLQGVKSCHTGL 119
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAP----GEFEGT-GMCSGC 231
+AGWN P+ ++ P + +G ++ A ++FFS C P ++ +C+G
Sbjct: 120 GRSAGWNIPIGTLR---PYLNWTGPPEPLQKAVANFFSASCVPCADGKQYPNLCRLCAGT 176
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
+ +C S YFG SGAF+CL GD+AFV+ T
Sbjct: 177 EADKCACSSQEPYFGYSGAFKCLENGAGDVAFVKDSTVF 215
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 38/237 (16%)
Query: 65 IKWCAVRDQYE-DCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV + E C+ S + C T +EC+ KGEAD +NL+ G Y
Sbjct: 345 VVWCAVGPEEERKCKQW----SDVSNRKVACASASTTEECIALVLKGEADALNLDGGFIY 400
Query: 124 TAFLNFSMKAIA--------NEVYCDH--AQSYDAVAVINRKVCQENGGINLMDFKGHKS 173
A + +A N C H + Y AVAV+ + + + G KS
Sbjct: 401 VAGKCGLVPVLAENQKSQNSNAPDCVHRPPEGYLAVAVVRK----SDADLTWNSLSGKKS 456
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH A WN P+ + T + FD FFS+ CAPG + +C+ C
Sbjct: 457 CHTGVGRTAAWNIPMGLLFNQTGSCKFDK-----------FFSQSCAPGADPQSSLCALC 505
Query: 232 GIEN---GSCHSNS--LYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWS 283
N C NS Y+G +GAFRCL E+ GD+AFV+ D +L + +G ++ W+
Sbjct: 506 VGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDVAFVK-DVTVLQNTDGKNSEPWA 561
>pdb|1F9B|A Chain A, Melanin Protein Interaction: X-Ray Structure Of The
Complex Of Mare Lactoferrin With Melanin Monomers
Length = 695
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 64 TIKWCAVRD-QYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+++WC + + C + + + C+++ ++ EC+ + +AD + L+ GL
Sbjct: 11 SVRWCTISPAEAAKCAKFQRNMKKVRGPSVSCIRKTSSFECIQAIAANKADAVTLDGGLV 70
Query: 123 YTAFLN-FSMKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCHGSY 178
Y A L+ + ++ +A EVY + Y AVAV+ + G L +G KSCH
Sbjct: 71 YEAGLHPYKLRPVAAEVYQTRGKPQTRYYAVAVVKK-----GSGFQLNQLQGVKSCHTGL 125
Query: 179 STAAGWNYPVNHIKGSTPTFD-SGKISDIEIA-SSFFSEVCAP----GEFEGT-GMCSGC 231
+AGWN P+ ++ P + +G ++ A ++FFS C P ++ +C+G
Sbjct: 126 GRSAGWNIPIGTLR---PYLNWTGPPEPLQKAVANFFSASCVPCADGKQYPNLCRLCAGT 182
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
+ +C S YFG SGAF+CL GD+AFV+ T
Sbjct: 183 EADKCACSSQEPYFGYSGAFKCLENGAGDVAFVKDSTVF 221
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 38/237 (16%)
Query: 65 IKWCAVRDQYE-DCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+ WCAV + E C+ S + C T +EC+ KGEAD +NL+ G Y
Sbjct: 351 VVWCAVGPEEERKCKQW----SDVSNRKVACASASTTEECIALVLKGEADALNLDGGFIY 406
Query: 124 TAFLNFSMKAIA--------NEVYCDH--AQSYDAVAVINRKVCQENGGINLMDFKGHKS 173
A + +A N C H + Y AVAV+ + + + G KS
Sbjct: 407 VAGKCGLVPVLAENQKSQNSNAPDCVHRPPEGYLAVAVVRK----SDADLTWNSLSGKKS 462
Query: 174 CHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC 231
CH A WN P+ + T + FD FFS+ CAPG + +C+ C
Sbjct: 463 CHTGVGRTAAWNIPMGLLFNQTGSCKFDK-----------FFSQSCAPGADPQSSLCALC 511
Query: 232 GIEN---GSCHSNS--LYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWS 283
N C NS Y+G +GAFRCL E+ GD+AFV+ D +L + +G ++ W+
Sbjct: 512 VGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDVAFVK-DVTVLQNTDGKNSEPWA 567
>pdb|1TFD|A Chain A, High-Resolution X-Ray Studies On Rabbit Serum Transferrin:
Preliminary Structure Analysis Of The N-Terminal Half-
Molecule At 2.3 Angstroms Resolution
Length = 304
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 64 TIKWCAVRD-QYEDCEYL---VSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEA 119
T++WCAV D + C + + + CVK+ + +C+ + EAD + L+A
Sbjct: 5 TVRWCAVNDHEASKCANFRDSMKKVLPEDGPRIICVKKASYLDCIKAIAAHEADAVTLDA 64
Query: 120 GLAYTAFLNFS-MKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCH 175
GL + A L + +K + E Y Y AVA++ + L + +G KSCH
Sbjct: 65 GLVHEAGLTPNNLKPVVAEFYGSKENPKTFYYAVALVKK-----GSNFQLNELQGKKSCH 119
Query: 176 GSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAP----GEFEGT-GMCSG 230
+AGWN P+ + P + K + +AS FFS C P +F +C G
Sbjct: 120 TGLGRSAGWNIPIGLLYCDLP--EPRKPLEKAVAS-FFSGSCVPCADGADFPQLCQLCPG 176
Query: 231 CGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
CG C S+ YFG SGAF+CL + LGD+AFV+ +T
Sbjct: 177 CG-----CSSSQPYFGYSGAFKCLKDGLGDVAFVKQET 209
>pdb|1H76|A Chain A, The Crystal Structure Of Diferric Porcine Serum
Transferrin
Length = 696
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 26/222 (11%)
Query: 64 TIKWCAVRDQYED-CEYLVSIISQS--EDYTWKCVKRDTAQECLDSARKGEADIINLEAG 120
T++WC + +Q + C +S++ CVK+ + +C+ + R EAD + L+AG
Sbjct: 5 TVRWCTISNQEANKCSSFRENMSKAVKNGPLVSCVKKSSYLDCIKAIRDKEADAVTLDAG 64
Query: 121 LAYTAFL-NFSMKAIANEVYC--DHAQS-YDAVAVINRKVCQENGGINLM--DFKGHKSC 174
L + A L +++K + E Y D+ Q+ Y AVAV+ + G N +G +SC
Sbjct: 65 LVFEAGLAPYNLKPVVAEFYGQKDNPQTHYYAVAVVKK-------GSNFQWNQLQGKRSC 117
Query: 175 HGSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIA-SSFFSEVCAP-----GEFEGTGMC 228
H +AGW P+ + P IE A +SFFS C P + C
Sbjct: 118 HTGLGRSAGWIIPMGLLYDQLPE----PRKPIEKAVASFFSSSCVPCADPVNFPKLCQQC 173
Query: 229 SGCGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDTAL 270
+G G E +C ++ YFG +GAF CL E+ GD+AFV+ T L
Sbjct: 174 AGKGAEKCACSNHEPYFGYAGAFNCLKEDAGDVAFVKHSTVL 215
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 36/235 (15%)
Query: 65 IKWCAV-RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
++WCA+ ++ + C+ SI S + +CV + ++C+ KGEAD ++L+ G Y
Sbjct: 346 VRWCAIGHEETQKCDAW-SINSGGK---IECVSAENTEDCIAKIVKGEADAMSLDGGYIY 401
Query: 124 TA-------FLNFSMKAIANEVYCDHAQSYDAVAVINRKVCQENGGINLMDFKGHKSCHG 176
A L + K + Y AVAV+ + +N + KG KSCH
Sbjct: 402 IAGKCGLVPVLAENYKTEGENCVNTPEKGYLAVAVVKK---SSGPDLNWNNLKGKKSCHT 458
Query: 177 SYSTAAGWNYPVNHI--KGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GI 233
+ AGWN P+ + K ++ FD FF E CAPG + +C+ C G
Sbjct: 459 AVDRTAGWNIPMGLLYNKINSCKFD-----------QFFGEGCAPGSQRNSSLCALCIGS 507
Query: 234 ENGS---CHSNS--LYFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWS 283
E C +N+ Y+G +GAFRCLVE+ GD+AFV+ D + + +G W+
Sbjct: 508 ERAPGRECLANNHERYYGYTGAFRCLVEK-GDVAFVK-DQVVQQNTDGKNKDDWA 560
>pdb|1JNF|A Chain A, Rabbit Serum Transferrin At 2.6 A Resolution
Length = 676
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 64 TIKWCAVRD-QYEDCEYL---VSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEA 119
T++WCAV D + C + + + CVK+ + +C+ + EAD + L+A
Sbjct: 5 TVRWCAVNDHEASKCANFRDSMKKVLPEDGPRIICVKKASYLDCIKAIAAHEADAVTLDA 64
Query: 120 GLAYTAFLNFS-MKAIANEVYCDHAQS---YDAVAVINRKVCQENGGINLMDFKGHKSCH 175
GL + A L + +K + E Y Y AVA++ + L + +G KSCH
Sbjct: 65 GLVHEAGLTPNNLKPVVAEFYGSKENPKTFYYAVALVKK-----GSNFQLNELQGKKSCH 119
Query: 176 GSYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAP----GEF-EGTGMCSG 230
+AGWN P+ + P + K + +AS FFS C P +F + +C G
Sbjct: 120 TGLGRSAGWNIPIGLLLCDLP--EPRKPLEKAVAS-FFSGSCVPCADGADFPQLCQLCPG 176
Query: 231 CGIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVRGDT 268
CG C S YFG SGAF+CL + LGD+AFV+ +T
Sbjct: 177 CG-----CSSVQPYFGYSGAFKCLKDGLGDVAFVKQET 209
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 46/236 (19%)
Query: 65 IKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+KWCA+ ++ + E+ V+ E C +T ++C+ GEAD ++L+ G
Sbjct: 342 VKWCALGHHERLKCDEWSVTSGGLIE-----CESAETPEDCIAKIMNGEADAMSLDGGYV 396
Query: 123 YTAFLNFSMKAIANEVY----CDHA--QSYDAVAVINRKVCQENGGINLMDFKGHKSCHG 176
Y A + + E Y C A + Y +VAV+ + N IN + +G KSCH
Sbjct: 397 YIAG-QCGLVPVLAENYESTDCKKAPEEGYLSVAVVKK----SNPDINWNNLEGKKSCHT 451
Query: 177 SYSTAAGWNYP-------VNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCS 229
+ AGWN P +NH + FD FF + CAPG + + +C
Sbjct: 452 AVDRTAGWNIPMGLLYNRINHCR-----FD-----------EFFRQGCAPGSQKNSSLCE 495
Query: 230 GCGIENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWS 283
C + C N+ Y+G +GAFRCLVE+ GD+AFV+ T +L + G ++ W+
Sbjct: 496 LC-VGPSVCAPNNREGYYGYTGAFRCLVEK-GDVAFVKSQT-VLQNTGGRNSEPWA 548
>pdb|3MC2|A Chain A, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|B Chain B, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|C Chain C, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|D Chain D, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
Length = 687
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 42/240 (17%)
Query: 65 IKWCAVRDQYE-DCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLAY 123
+KWCAV Q C+ ++ + C +T ++C+ + KGEAD ++L+ G AY
Sbjct: 342 VKWCAVGQQERTKCDQWSAVSGGA----LACATEETPEDCIAATMKGEADAMSLDGGFAY 397
Query: 124 TAFLNFSMKAIANEVYCDHA-------------QSYDAVAVINRKVCQENGGINLMDFKG 170
A + +A H+ + Y VAV+ + + GI +G
Sbjct: 398 VAGHCGLVPVLAENYLSTHSSGRLGSKCVNAPLEGYYVVAVVKK----SDVGITWKSLQG 453
Query: 171 HKSCHGSYSTAAGWNYPVNHIKGSTPT--FDSGKISDIEIASSFFSEVCAPGEFEGTGMC 228
KSCH + T+ GWN P+ I T + FD +FFS CAPG + +C
Sbjct: 454 KKSCHTAVGTSEGWNVPMGLIYDQTGSCKFD-----------AFFSRSCAPGSDPDSPLC 502
Query: 229 SGCGIENGSCHSNSL-----YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWS 283
+ C N H + Y G SGA RCLVE+ GD+AF++ T +L + +G + W+
Sbjct: 503 ALCVGGNNPAHMCAANNAEGYHGSSGALRCLVEK-GDVAFMKHPT-VLQNTDGKNPEPWA 560
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 64 TIKWCAVRD-QYEDCEYL---VSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEA 119
TI+WC V D + C + + + CV++ + EC+ + D + ++
Sbjct: 11 TIRWCVVSDHEATKCSSFRDNMKKVLPAGGPAVTCVRKMSHPECIRDISANKVDAVTVDG 70
Query: 120 GLAYTAFL-NFSMKAIANEVYC--DHAQSYDAVAVINRKVCQENGGINLMDFKGHKSCHG 176
L A L + S+K I E Y D +++ V + +K G L +G KSCH
Sbjct: 71 ALVAEADLPHHSLKPIMAEYYGSKDDPKTHYYVVAMAKK----GTGFQLNQLRGKKSCHT 126
Query: 177 SYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAP---GEFEGT--GMCSGC 231
+AGW P++ + SG S A++FFS C P G+ + +C+G
Sbjct: 127 GLGWSAGWYVPLSTL------LPSG--SRETAAATFFSSSCVPCADGKMFPSLCQLCAGK 178
Query: 232 GIENGSCHSNSLYFGDSGAFRCLVEELGDIAFVR 265
G + +C S YFG GA +CL + D++FV+
Sbjct: 179 GTDKCACSSREPYFGSWGALKCLQDGTADVSFVK 212
>pdb|3SKP|A Chain A, The Structure Of Apo-Human Transferrin C-Lobe With Bound
Sulfate Ions
Length = 342
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 37/226 (16%)
Query: 65 IKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 5 VKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGFV 59
Query: 123 YTAFLNFSMKAIA-NEVYCDHAQS-----YDAVAVINRKVCQENGGINLMDFKGHKSCHG 176
Y A + +A N D+ + Y AVAV+ + + + KG KSCH
Sbjct: 60 YIAGKCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSA----SDLTWDNLKGKKSCHT 115
Query: 177 SYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GIEN 235
+ AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 116 AVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGSGL 166
Query: 236 GSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 167 NLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 204
>pdb|3V89|B Chain B, The Crystal Structure Of Transferrin Binding Protein A
(Tbpa) From Neisseria Meningitidis Serogroup B In
Complex With The C-Lobe Of Human Transferrin
Length = 343
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 37/226 (16%)
Query: 65 IKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+KWCA+ ++ + E+ V+ + + E CV +T ++C+ GEAD ++L+ G
Sbjct: 6 VKWCALSHHERLKCDEWSVNSVGKIE-----CVSAETTEDCIAKIMNGEADAMSLDGGFV 60
Query: 123 YTAFLNFSMKAIA-NEVYCDHAQS-----YDAVAVINRKVCQENGGINLMDFKGHKSCHG 176
Y A + +A N D+ + Y AVAV+ + + + KG KSCH
Sbjct: 61 YIAGKCGLVPVLAENYNKSDNCEDTPEAGYFAVAVVKKSA----SDLTWDNLKGKKSCHT 116
Query: 177 SYSTAAGWNYPVNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GIEN 235
+ AGWN P+ + KI+ FFSE CAPG + + +C C G
Sbjct: 117 AVGRTAGWNIPMGLL--------YNKINHCRF-DEFFSEGCAPGSKKDSSLCKLCMGSGL 167
Query: 236 GSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQN 279
C N+ Y+G +GAFRCLVE+ GD+AFV+ T PQN
Sbjct: 168 NLCEPNNKEGYYGYTGAFRCLVEK-GDVAFVKHQTV-------PQN 205
>pdb|1SUV|E Chain E, Structure Of Human Transferrin Receptor-transferrin
Complex
pdb|1SUV|F Chain F, Structure Of Human Transferrin Receptor-transferrin
Complex
Length = 345
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 46/236 (19%)
Query: 65 IKWCAV--RDQYEDCEYLVSIISQSEDYTWKCVKRDTAQECLDSARKGEADIINLEAGLA 122
+KWCA+ ++ + E+ V+ E C +T ++C+ GEAD ++L+ G
Sbjct: 11 VKWCALGHHERLKCDEWSVTSGGLIE-----CESAETPEDCIAKIMNGEADAMSLDGGYV 65
Query: 123 YTAFLNFSMKAIANEVY----CDHA--QSYDAVAVINRKVCQENGGINLMDFKGHKSCHG 176
Y A + + E Y C A + Y +VAV+ + N IN + +G KSCH
Sbjct: 66 YIAG-QCGLVPVLAENYESTDCKKAPEEGYLSVAVVKK----SNPDINWNNLEGKKSCHT 120
Query: 177 SYSTAAGWNYP-------VNHIKGSTPTFDSGKISDIEIASSFFSEVCAPGEFEGTGMCS 229
+ AGWN P +NH + FD FF + CAPG + + +C
Sbjct: 121 AVDRTAGWNIPMGLLYNRINHCR-----FD-----------EFFRQGCAPGSQKNSSLCE 164
Query: 230 GCGIENGSCHSNSL--YFGDSGAFRCLVEELGDIAFVRGDTALLYSKEGPQNQSWS 283
C + C N+ Y+G +GAFRCLVE+ GD+AFV+ T +L + G ++ W+
Sbjct: 165 LC-VGPSVCAPNNREGYYGYTGAFRCLVEK-GDVAFVKSQT-VLQNTGGRNSEPWA 217
>pdb|1LGB|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 159
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 15/132 (11%)
Query: 146 YDAVAVINRKVCQENGGINLMDFKGHKSCHGSYSTAAGWNYPVNHIKGSTPTFD-SGKIS 204
Y AVAV+ ++ G L + +G KSCH AGWN P+ ++ P + +G
Sbjct: 2 YYAVAVV-----KKGGSFQLNELQGLKSCHTGLRRTAGWNVPIGTLR---PFLNWTGPPE 53
Query: 205 DIEIA-SSFFSEVCAPGEFEGT-----GMCSGCGIENGSCHSNSLYFGDSGAFRCLVEEL 258
IE A + FFS C PG +G +C+G G + S YF SGAF+CL +
Sbjct: 54 PIEAAVARFFSASCVPGADKGQFPNLCRLCAGTGENKCAFSSQEPYFSYSGAFKCLKDGA 113
Query: 259 GDIAFVRGDTAL 270
GD+AF+R T
Sbjct: 114 GDVAFIRESTVF 125
>pdb|1GVC|A Chain A, 18kda N-Ii Domain Fragment Of Duck Ovotransferrin + Nta
Length = 157
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 145 SYDAVAVINRKVCQENGGINLM--DFKGHKSCHGSYSTAAGWNYPVNHI--KGSTP--TF 198
SY AVAV+ + G + M D +G SCH +AGWN P+ + +G
Sbjct: 1 SYYAVAVVKK-------GTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHRGDIEWEGI 53
Query: 199 DSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GIENGSCHSNSLYFGDSGAFRCLVEE 257
+SG + + + FFS C PG +C C G C N+ Y G SGAF+CL +
Sbjct: 54 ESGSVE--QAVAKFFSASCVPGATTEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDG 111
Query: 258 LGDIAFVRGDT 268
GD+AFV+ T
Sbjct: 112 KGDVAFVKHTT 122
>pdb|1GV8|A Chain A, 18 Kda Fragment Of N-Ii Domain Of Duck Ovotransferrin
Length = 159
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 145 SYDAVAVINRKVCQENGGINLM--DFKGHKSCHGSYSTAAGWNYPVNHI--KGSTP--TF 198
SY AVAV+ + G + M D +G SCH +AGWN P+ + +G
Sbjct: 1 SYYAVAVVKK-------GTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHRGDIEWEGI 53
Query: 199 DSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GIENGSCHSNSLYFGDSGAFRCLVEE 257
+SG + + + FFS C PG +C C G C N+ Y G SGAF+CL +
Sbjct: 54 ESGSVE--QAVAKFFSASCVPGATTEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDG 111
Query: 258 LGDIAFVRGDT 268
GD+AFV+ T
Sbjct: 112 KGDVAFVKHTT 122
>pdb|1OVB|A Chain A, The Mechanism Of Iron Uptake By Transferrins: The
Structure Of An 18kd Nii-Domain Fragment At 2.3
Angstroms Resolution
Length = 159
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 145 SYDAVAVINRKVCQENGGINLM--DFKGHKSCHGSYSTAAGWNYPVNHIKGSTPT----F 198
SY AVAV+ + G + M D +G SCH +AGWN P+ +
Sbjct: 1 SYYAVAVVKK-------GTDFMIKDLRGKTSCHTGLGRSAGWNIPIGTLIHREDIEWEGI 53
Query: 199 DSGKISDIEIASSFFSEVCAPGEFEGTGMCSGC-GIENGSCHSNSLYFGDSGAFRCLVEE 257
+SG + + + FFS C PG +C C G C N+ Y G SGAF+CL +
Sbjct: 54 ESGSVE--QAVAKFFSASCVPGATIEQKLCRQCKGDAKTKCLRNAPYSGYSGAFQCLKDG 111
Query: 258 LGDIAFVRGDT 268
GD+AFV+ T
Sbjct: 112 KGDVAFVKHTT 122
>pdb|3MPL|A Chain A, Crystal Structure Of Bordetella Pertussis Bvgs Vft2 Domain
(Double Mutant F375eQ461E)
Length = 267
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 92 WKCVKRDTAQECLDSARKGEADIIN-LEAGLAYTAFLNFSMKAIANEVYCDHAQSYDA 148
++ + DT +E + R GEAD+ LE A +FL+FS + N + Q DA
Sbjct: 73 FEIIGVDTVEELIAKLRSGEADMAGALEVNSARESFLSFSRPYVRNGMVIVTRQDPDA 130
>pdb|2A08|A Chain A, Structure Of The Yeast Yhh6 Sh3 Domain
pdb|2A08|B Chain B, Structure Of The Yeast Yhh6 Sh3 Domain
Length = 60
Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 256 EELGDIAFVRGDTALLYSKEGPQNQSWSSKS 286
E+ GD+AF +GD + K QN W+ ++
Sbjct: 15 EQPGDLAFKKGDVITILKKSDSQNDWWTGRT 45
>pdb|1OOT|A Chain A, Crystal Structure Of The Sh3 Domain From A S. Cerevisiae
Hypothetical 40.4 Kda Protein At 1.39 A Resolution
pdb|1SSH|A Chain A, Crystal Structure Of The Sh3 Domain From A S. Cerevisiae
Hypothetical 40.4 Kda Protein In Complex With A Peptide
Length = 60
Score = 28.1 bits (61), Expect = 5.9, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 256 EELGDIAFVRGDTALLYSKEGPQNQSWSSK 285
EE GD+ F +GD + K QN W+ +
Sbjct: 15 EESGDLPFRKGDVITILKKSDSQNDWWTGR 44
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,722,509
Number of Sequences: 62578
Number of extensions: 310674
Number of successful extensions: 963
Number of sequences better than 100.0: 78
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 599
Number of HSP's gapped (non-prelim): 108
length of query: 291
length of database: 14,973,337
effective HSP length: 98
effective length of query: 193
effective length of database: 8,840,693
effective search space: 1706253749
effective search space used: 1706253749
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)