BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044326
FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQVVSFQFQHNVCGRSIYAEG
TVDALLFLSKKVQSKADKCISNMIDVLREGNMQDMNKKEFLE

High Scoring Gene Products

Symbol, full name Information P value
AT3G59890 protein from Arabidopsis thaliana 2.0e-34
AT2G44040 protein from Arabidopsis thaliana 1.7e-33

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044326
        (102 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2080482 - symbol:AT3G59890 species:3702 "Arabi...   227  2.0e-34   2
TAIR|locus:2051854 - symbol:AT2G44040 species:3702 "Arabi...   222  1.7e-33   2


>TAIR|locus:2080482 [details] [associations]
            symbol:AT3G59890 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008839
            "4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS]
            [GO:0009089 "lysine biosynthetic process via diaminopimelate"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IEA]
            [GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0070402
            "NADPH binding" evidence=IEA] InterPro:IPR000846 InterPro:IPR011770
            InterPro:IPR011859 InterPro:IPR022663 Pfam:PF01113 Pfam:PF05173
            UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0009507 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:3.40.50.720 GO:GO:0070402
            GO:GO:0009089 GO:GO:0019877 EMBL:AL138647 eggNOG:COG0289
            HOGENOM:HOG000265601 KO:K00215 ProtClustDB:PLN02775 GO:GO:0008839
            PANTHER:PTHR20836 TIGRFAMs:TIGR02130 EMBL:AY087505 EMBL:BT026511
            IPI:IPI00521803 IPI:IPI00523614 PIR:T47813 RefSeq:NP_567088.1
            RefSeq:NP_974464.1 UniGene:At.34540 ProteinModelPortal:Q8LB01
            SMR:Q8LB01 STRING:Q8LB01 PaxDb:Q8LB01 PRIDE:Q8LB01
            EnsemblPlants:AT3G59890.1 GeneID:825159 KEGG:ath:AT3G59890
            TAIR:At3g59890 InParanoid:Q8LB01 OMA:VVDYTVP PhylomeDB:Q8LB01
            Genevestigator:Q8LB01 Uniprot:Q8LB01
        Length = 349

 Score = 227 (85.0 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
 Identities = 43/54 (79%), Positives = 51/54 (94%)

Query:    40 DQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ 93
             D+ VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++SKA+K I NMIDVLREGNM+
Sbjct:   296 DKTVSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRSKAEKRIYNMIDVLREGNMR 349

 Score = 164 (62.8 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
 Identities = 32/42 (76%), Positives = 37/42 (88%)

Query:     1 FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQV 42
             F+GY L+V+ESHQA KLD SGTAKAVIS FQKL VS+DMDQ+
Sbjct:   221 FAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQI 262


>TAIR|locus:2051854 [details] [associations]
            symbol:AT2G44040 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008839
            "4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS]
            [GO:0009089 "lysine biosynthetic process via diaminopimelate"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IEA;IDA]
            [GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0070402
            "NADPH binding" evidence=IEA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] InterPro:IPR000846 InterPro:IPR011770
            InterPro:IPR011859 InterPro:IPR022663 Pfam:PF01113 Pfam:PF05173
            UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0009570 EMBL:CP002685
            GenomeReviews:CT485783_GR Gene3D:3.40.50.720 GO:GO:0070402
            GO:GO:0009089 GO:GO:0019877 EMBL:AC004005 EMBL:BT008540
            EMBL:AY084299 EMBL:AK118845 IPI:IPI00545380 PIR:T00684
            RefSeq:NP_566006.1 UniGene:At.36804 ProteinModelPortal:O80574
            SMR:O80574 IntAct:O80574 STRING:O80574 PaxDb:O80574 PRIDE:O80574
            EnsemblPlants:AT2G44040.1 GeneID:819009 KEGG:ath:AT2G44040
            TAIR:At2g44040 eggNOG:COG0289 HOGENOM:HOG000265601
            InParanoid:O80574 KO:K00215 OMA:NTFDVLD PhylomeDB:O80574
            ProtClustDB:PLN02775 Genevestigator:O80574 GO:GO:0008839
            PANTHER:PTHR20836 TIGRFAMs:TIGR02130 Uniprot:O80574
        Length = 347

 Score = 222 (83.2 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 42/54 (77%), Positives = 50/54 (92%)

Query:    40 DQVVSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ 93
             D+ VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++ KAD+ I NMIDVLREGNM+
Sbjct:   294 DETVSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRLKADQRIYNMIDVLREGNMR 347

 Score = 161 (61.7 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
 Identities = 32/42 (76%), Positives = 36/42 (85%)

Query:     1 FSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQV 42
             FSGY L V+ESHQA KLD SGTAKAVIS FQ+L VS+DMDQ+
Sbjct:   219 FSGYSLDVMESHQASKLDASGTAKAVISCFQELGVSYDMDQI 260


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102       102   0.00091  102 3  11 22  0.37    30
                                                     29  0.48    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  503 (54 KB)
  Total size of DFA:  97 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.88u 0.09s 9.97t   Elapsed:  00:00:02
  Total cpu time:  9.88u 0.09s 9.97t   Elapsed:  00:00:02
  Start:  Tue May 21 04:35:08 2013   End:  Tue May 21 04:35:10 2013

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