BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044338
MEEDKQSGVVDRKRQTRQKNGGSTKQTINKTSPEYIRTRSCGSRLRGNSANDTDRPEQLL
KTKCRRMRRKIARELFPSNNHSNEQCNRHSRTGMGCKTQMPTWRCSDDDDESQEENNDKE
DQIEGYSSENDKGCMYRLTDEETPCHVGEWFKFEDPPRHKMILYHGQRFRDVSHFRKAIE
VFAICDGFKLCVMENRAHVVSYECFDLRCDWKIKAERVVNGRTFIVTEFVAQHKCTRRHQ
QFQHRSKWISAIYLHRWKLQPNLRTVDIRDEIKATYGFKDEMERINSRNIVLLETKRHEY
GEVERFKRMFVCWERTSYAFKNQCRRLLAVDGWKINNPYNSVMLVAAALDGNNGILPIAF
CEVHVEDLDSWHGEGLCIMGDGDNGIDYAVEEFLPKTVYRQCCLKIFTEMVKRFPTTPVE
HFFWSACRSTSATSFNKYMDLIHNESEECHDWLLQTDWSSWALFTIPKWVKCTCVTLSIT
DKLRNYLHQYLEMSIASRFVAIARLTAKLFERRRIEVWNWYREKVTPTVREVIKDRTIDG
QRFVLVEENGTRLKLTDTTSIIFDLNMEAQSCNCGLWQISGIPCAHACKGIQLIMGNVEE
YVDNMMSIQNFCSMYTPGMMPFPKKHAWKWGACNKLLPPMIESVNTLSMKGSNESASSRA
RQCIENNSDAAINNPQWTHPNTLTHSAEEKDSLRIKSTSSDGSL

High Scoring Gene Products

Symbol, full name Information P value
AT1G49920 protein from Arabidopsis thaliana 6.0e-11
AT1G64255 protein from Arabidopsis thaliana 2.6e-09
AT1G64260 protein from Arabidopsis thaliana 4.1e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044338
        (704 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2197122 - symbol:AT1G49920 "AT1G49920" species...   132  6.0e-11   2
TAIR|locus:1006230722 - symbol:AT1G64255 species:3702 "Ar...    94  2.6e-09   4
TAIR|locus:2014230 - symbol:AT1G64260 "AT1G64260" species...   115  4.1e-09   2


>TAIR|locus:2197122 [details] [associations]
            symbol:AT1G49920 "AT1G49920" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 InterPro:IPR018289
            Pfam:PF10551 Pfam:PF03108 EMBL:AC074110 IPI:IPI00531525
            RefSeq:NP_175414.1 UniGene:At.52103 EnsemblPlants:AT1G49920.1
            GeneID:841415 KEGG:ath:AT1G49920 TAIR:At1g49920 eggNOG:NOG303426
            HOGENOM:HOG000152182 InParanoid:Q9C702 OMA:ISESHTC PhylomeDB:Q9C702
            ProtClustDB:CLSN2682695 Genevestigator:Q9C702 Uniprot:Q9C702
        Length = 785

 Score = 132 (51.5 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
 Identities = 66/270 (24%), Positives = 113/270 (41%)

Query:   395 PKTVYRQCCLKIFTEMVKRFPTTPVE-HFFWSACRSTSATS-FNKYMDLIHNESEECHDW 452
             P   +R C   + +++    P      HF      S+S    F+ YM  I   + E   W
Sbjct:   466 PWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSYMKEIKERNPEAWKW 525

Query:   453 LLQTDWSSWALFTIPKWVKCTCVTLSITDKLRNYLHQYLEMSIASRFVAI-ARLT---AK 508
             L Q     WAL       +   + +  T+ L     ++ ++++A   + +  +L    A+
Sbjct:   526 LDQFPPHQWAL-AHDDGRRYGIMRID-TEALFAVCKRFRKVAMAGGVMLLFGQLKDAFAE 583

Query:   509 LFERRR--IEVWNWYREKVTPTVREVIKDR-----TI-----DGQRFVLVEENGTRL--K 554
              F+  R  ++  + Y E V   + E   D      TI     D  +  +  +  TRL  +
Sbjct:   584 SFKLSRGSLKHGDVYTEHVMEKLEEFETDSDTWVITITPLERDAYQVSMAPKKKTRLMGQ 643

Query:   555 LTDTTSIIFDLNMEAQSCNCGLWQISGIPCAHACKGIQLIMGNVEEYVDNMMSIQNFCSM 614
               D+TS I  LN    +C CG +Q +  PC HA      +  N  +YVD+  +++ +   
Sbjct:   644 SNDSTSGIVQLN--DTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKT 701

Query:   615 YTPGMMPFPKKHAWK--WGACNKLLPPMIE 642
             Y+    P P+  AW   +G    L+PP+IE
Sbjct:   702 YSAKFSPVPELSAWPEAYGVPT-LIPPVIE 730

 Score = 107 (42.7 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
 Identities = 42/178 (23%), Positives = 73/178 (41%)

Query:   166 GQRFRDVSHFRKAIEVFAICDGFKLCVMENRAHVVSYECFDLRCDWKIKAERVVNGRTFI 225
             G  F+D++  +KA++  +I    K  + E    V   EC    C W I A R      F 
Sbjct:   183 GLCFKDLAEMKKAVDWCSIKRRQKCLLRETEKDVYVVECERWHCKWSICASRREEDGLFE 242

Query:   226 VTEFVAQHKCTRRHQQFQHRSKWISAIYLHRWKLQPNLRTVDIRDEIKATYGFK-DEMER 284
             +TE    H C   H      ++ I        ++QP L T ++    +  +GF  D++  
Sbjct:   243 ITECSGPHDCYPEHLN-DFDAECIPFQIERVVRVQPTLSTAELDKWWEKKFGFALDQVVE 301

Query:   285 INSRNIVLLETKRHEYGEVERFKRMFVCWERTSYAFKNQCRRLLAVDGWKINNPYNSV 342
               S  +V       E  +V+  KR F  W+++          L + +G  ++  Y+S+
Sbjct:   302 HCSEGLV-------EDAKVKAIKRFFGDWDQSFRLIPKLMSVLHSSNGLLVDWQYDSL 352

 Score = 97 (39.2 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
 Identities = 19/66 (28%), Positives = 34/66 (51%)

Query:   306 FKRMFVCWERTSYAFKNQCRRLLAVDGWKINNPYNSVMLVAAALDGNNGILPIAFCEVHV 365
             F+ +F  + ++   F++ CR L+ VD   +   Y   +++A+A D  N   P+AF     
Sbjct:   361 FRGLFWAFSQSIQGFQH-CRPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFAVTKE 419

Query:   366 EDLDSW 371
               +DSW
Sbjct:   420 VSVDSW 425


>TAIR|locus:1006230722 [details] [associations]
            symbol:AT1G64255 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GO:GO:0008270 InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108
            IPI:IPI00538919 RefSeq:NP_974088.1 UniGene:At.66092 PRIDE:F4I6P0
            EnsemblPlants:AT1G64255.1 GeneID:2745850 KEGG:ath:AT1G64255
            OMA:ECHELPI Uniprot:F4I6P0
        Length = 750

 Score = 94 (38.1 bits), Expect = 2.6e-09, Sum P(4) = 2.6e-09
 Identities = 22/72 (30%), Positives = 34/72 (47%)

Query:   571 SCNCGLWQISGIPCAHACKGIQLIMGNVEEYVDNMMSIQNFCSMYTPGMMPFPKKHAW-K 629
             SC CG +Q    PC HA    + +  N  +YVD+  +++     Y       P+  AW +
Sbjct:   651 SCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFSHVPEMSAWPE 710

Query:   630 WGACNKLLPPMI 641
                  +LLPP+I
Sbjct:   711 ASGVPRLLPPVI 722

 Score = 84 (34.6 bits), Expect = 2.6e-09, Sum P(4) = 2.6e-09
 Identities = 35/135 (25%), Positives = 59/135 (43%)

Query:   254 LHRW---KLQPNLRTVDIR----DEIKATYG-----FKDE---MERINSRNIVLLETKRH 298
             L +W   K+   L T D+R      IK  +G     F+D    M  + S N +L++ K  
Sbjct:   296 LKKWWKKKIGYELETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSNGLLVDWKYD 355

Query:   299 EYGEVE--RFKRMFVCWERTSYAFKNQCRRLLAVDGWKINNPYNSVMLVAAALDGNNGIL 356
              +       F  +F  + ++   F++ CR L+ VD   +N  Y   +++A+ +D  N   
Sbjct:   356 LFPNPNFASFCGVFWAFPQSIEGFQH-CRPLIVVDTKNLNCEYQLKLMIASGVDAANKYF 414

Query:   357 PIAFCEVHVEDLDSW 371
             P+AF        D W
Sbjct:   415 PLAFAVTKEVSTDIW 429

 Score = 72 (30.4 bits), Expect = 2.6e-09, Sum P(4) = 2.6e-09
 Identities = 16/70 (22%), Positives = 29/70 (41%)

Query:   166 GQRFRDVSHFRKAIEVFAICDGFKLCVMENRAHVVSYECFDLRCDWKIKAERVVNGRTFI 225
             G  F+D    +KA++  ++    K  V E       +EC   +C W + A R+       
Sbjct:   195 GLCFKDGDELKKAVDWCSLKAQQKCVVRETAKDEYIFECIRWKCKWSLGAARMKKHGLVE 254

Query:   226 VTEFVAQHKC 235
             + ++   H C
Sbjct:   255 IIKYTGPHTC 264

 Score = 59 (25.8 bits), Expect = 2.6e-09, Sum P(4) = 2.6e-09
 Identities = 24/95 (25%), Positives = 37/95 (38%)

Query:   374 EGLCIMGDGDNGIDYAVEE----FLPKTVYRQCCLKIFTEMVKR-FPTTPVEHFFWSACR 428
             +GLC++      I   V E    +     Y +  L  F     R FP+  +      A  
Sbjct:   444 KGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRAGS 503

Query:   429 STSATSFNKYMDLIHNESEECHDWLLQTDWSSWAL 463
             ++    F  YM+ I  ++ E   WL Q   + WAL
Sbjct:   504 TSQKDEFVSYMNDIKEKNPEARKWLDQFPQNRWAL 538

 Score = 37 (18.1 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
 Identities = 7/20 (35%), Positives = 10/20 (50%)

Query:   383 DNGIDYAVEEFLPKTVYRQC 402
             DNG  Y + E   K ++  C
Sbjct:   541 DNGRRYGIMEINTKALFAVC 560


>TAIR|locus:2014230 [details] [associations]
            symbol:AT1G64260 "AT1G64260" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 EMBL:AC066689
            InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108 eggNOG:NOG303426
            HOGENOM:HOG000152182 ProtClustDB:CLSN2682695 IPI:IPI00526445
            RefSeq:NP_176608.2 UniGene:At.66093 EnsemblPlants:AT1G64260.1
            GeneID:842731 KEGG:ath:AT1G64260 TAIR:At1g64260 InParanoid:Q9C7V1
            OMA:HDHELGL PhylomeDB:Q9C7V1 Genevestigator:Q9C7V1 Uniprot:Q9C7V1
        Length = 719

 Score = 115 (45.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
 Identities = 51/263 (19%), Positives = 103/263 (39%)

Query:   395 PKTVYRQCCLKIFTEMVKRFPTTPVEHFFWSACRSTSATSFNKYMDLIHNESEECHDWLL 454
             P   ++ C   + ++ +  F    +E     A  +     F+ YM+ I  ++ E   WL 
Sbjct:   463 PWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNPEAWKWLD 522

Query:   455 QTDWSSWALFTIPKWVKCTCVTL---SITDKLRNYLHQYLEMSIASRFVAIARLTAKLFE 511
             Q     WAL      ++   + +   ++    R +   Y  +++    + +       F+
Sbjct:   523 QIPRHKWAL-AHDSGLRYGIIEIDREALFAVCRGF--PYCTVAMTGGVMLMFDELRSSFD 579

Query:   512 RRRIEVWNWYREKV--TPTVREVIKDRTIDGQRFVLVEENGTRLKLTDTTSI---IFDLN 566
             +    +++     V  T    + +++   D   +V+ +      K+++++     I  LN
Sbjct:   580 KSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLN 639

Query:   567 MEAQSCNCGLWQISGIPCAHACKGIQLIMGNVEEYVDNMMSIQNFCSMYTPGMMPFPKKH 626
             +   +C C  +Q    PC HA    + +  N  +YVD   +++ +C  Y     P P   
Sbjct:   640 VS--TCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVA 697

Query:   627 AWKWGACN--KLLPPMIE-SVNT 646
             AW    C    L PP  + S NT
Sbjct:   698 AWPED-CRVPTLFPPSQQLSPNT 719

 Score = 106 (42.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
 Identities = 32/152 (21%), Positives = 69/152 (45%)

Query:   159 HKMILYHGQRFRDVSHFRKAIEVFAICDGFKLCVMENRAHVVSYECFDLRCDWKIKAERV 218
             H M L  G  F+D    +KA++ + I       V E    + ++EC   +C W ++A R+
Sbjct:   183 HDMHL--GLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEMYTFECVRWKCKWSLRAARM 240

Query:   219 VNGRTFIVTEFVAQHKCTRRHQQFQHRSKWISAIYLHRW-KLQPNLRTVDIRDEIKATYG 277
                    +T++   H C+  +      S++ +A  + R  ++QP L   +++   K   G
Sbjct:   241 EEHGLVEITKYTGPHTCSHEYPN-DFESEF-AADEIERVVRIQPTLSIAELKKWWKEKTG 298

Query:   278 FKDEMERINSRNIVLLETKRHEYGEVERFKRM 309
             ++ +  ++       LE  +  +G+ ++  R+
Sbjct:   299 YELQTSKMRDGK---LEVIKRVFGDEDQSFRV 327

 Score = 99 (39.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 35/140 (25%), Positives = 65/140 (46%)

Query:   249 ISAIYLHRW---KLQPNLRTVDIRDE----IKATYGFKDEMERI--------NSRNIVLL 293
             +S   L +W   K    L+T  +RD     IK  +G +D+  R+        +S N +L+
Sbjct:   284 LSIAELKKWWKEKTGYELQTSKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSNGLLV 343

Query:   294 ETKRHEYGEVE--RFKRMFVCWERTSYAFKNQCRRLLAVDGWKINNPYNSVMLVAAALDG 351
             + +   +   +   F+ +F  + ++   F++ CR L+ VD   +N  Y   +++A+ +D 
Sbjct:   344 DWQYDLFPNPDFASFRGVFWSFSQSIEGFQH-CRPLIVVDTKSLNGKYQLKLMIASGVDA 402

Query:   352 NNGILPIAFCEVHVEDLDSW 371
              N   P+AF        DSW
Sbjct:   403 ANKFFPLAFAVTKEVSTDSW 422


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      704       687   0.00080  121 3  11 22  0.50    33
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  637 (68 KB)
  Total size of DFA:  455 KB (2213 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  61.04u 0.14s 61.18t   Elapsed:  00:00:03
  Total cpu time:  61.04u 0.14s 61.18t   Elapsed:  00:00:03
  Start:  Tue May 21 04:57:23 2013   End:  Tue May 21 04:57:26 2013

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