Your job contains 1 sequence.
>044343
VPWNFSVASGDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISE
GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV
KALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDVL
FSWSSRDIIGSLGQSASFISS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044343
(201 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 242 1.2e-19 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 215 8.5e-17 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 206 4.5e-16 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 203 1.0e-15 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 190 5.4e-15 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 197 6.2e-15 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 189 8.5e-15 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 194 9.4e-15 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 193 1.1e-14 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 190 3.0e-14 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 185 3.5e-14 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 184 8.6e-14 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 176 1.0e-12 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 173 1.8e-12 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 173 3.2e-12 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 162 1.3e-11 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 156 2.2e-11 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 159 2.9e-11 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 149 2.3e-10 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 150 2.6e-10 1
TAIR|locus:2098008 - symbol:PIL2 "phytochrome interacting... 149 5.8e-10 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 146 7.2e-10 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 148 7.6e-10 1
TAIR|locus:2199307 - symbol:AT1G68240 species:3702 "Arabi... 140 1.1e-09 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 149 1.2e-09 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 147 1.2e-09 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 144 1.3e-09 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 145 1.3e-09 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 145 1.5e-09 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 141 9.0e-09 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 139 2.0e-08 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 136 6.9e-08 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 136 1.0e-07 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 128 2.2e-07 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 132 3.4e-07 2
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 129 4.6e-07 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 133 5.1e-07 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 128 1.1e-06 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 129 1.4e-06 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 133 1.5e-06 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 129 1.8e-06 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 129 1.9e-06 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 128 1.9e-06 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 127 2.9e-06 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 125 2.9e-06 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 127 3.2e-06 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 123 3.2e-06 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 127 4.3e-06 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 128 5.3e-06 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 127 5.3e-06 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 126 6.7e-06 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 127 7.1e-06 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 127 7.1e-06 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 122 7.1e-06 1
TAIR|locus:2204898 - symbol:HFR1 "AT1G02340" species:3702... 122 9.5e-06 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 121 1.0e-05 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 125 1.0e-05 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 123 1.4e-05 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 118 1.5e-05 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 122 1.7e-05 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 121 1.7e-05 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 123 1.8e-05 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 120 1.9e-05 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 118 2.9e-05 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 120 3.1e-05 2
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 119 4.9e-05 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 118 5.0e-05 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 116 5.3e-05 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 119 7.3e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 112 0.00012 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 117 0.00013 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 111 0.00018 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 113 0.00019 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 114 0.00025 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 107 0.00026 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 109 0.00031 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 110 0.00032 1
TAIR|locus:2152262 - symbol:BIM3 "AT5G38860" species:3702... 110 0.00032 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 109 0.00034 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 88 0.00034 2
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 110 0.00037 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 109 0.00043 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 109 0.00047 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 107 0.00056 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 104 0.00080 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 107 0.00086 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 107 0.00099 1
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 242 (90.2 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 56/141 (39%), Positives = 85/141 (60%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNRP-KRTHSAEVHNQSEXXXXXXINKRLKSLK 98
+ S S D D+DD G+ RK R KR+ +AEVHN SE IN+++++L+
Sbjct: 284 ECSASQDDDLDD-------EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQ 336
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P+ Q ++P ++
Sbjct: 337 ELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGTGLCIPPMLLPTAMQHLQIPPMAH 395
Query: 159 NVPISPKLGMGSGIGTGMVDV 179
P LGMG G G G+ D+
Sbjct: 396 ----FPHLGMGLGYGMGVFDM 412
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 215 (80.7 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 61/181 (33%), Positives = 92/181 (50%)
Query: 11 DSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERK---PD 67
+SEK + S + L+ S+ P+ + HS D+D S+ E G RK P
Sbjct: 275 ESEKAVVCSSVGSGNSLDGP-SESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPS 333
Query: 68 NR---PKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KR+ SAEVHN SE IN+++++L+EL+PNCNK D+AS+LD+A+ Y+K+L+
Sbjct: 334 RTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQ 393
Query: 125 HQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDVLFSWS 184
Q+++MS G M P G P + +GMG G+ D+ S
Sbjct: 394 LQVQIMSMASGYYLPPAVMFPPGMGHY------PAAAAAMAMGMGMPYAMGLPDLSRGGS 447
Query: 185 S 185
S
Sbjct: 448 S 448
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 206 (77.6 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 42/97 (43%), Positives = 67/97 (69%)
Query: 56 TEISEGMERKPDNRP---KRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASV 112
+E+++ E +P RP +RT +AEVHN SE IN++L++L+ELVP+CNK+D+AS+
Sbjct: 209 SEVAD--ETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASI 266
Query: 113 LDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
LD+A+ Y+K+L+ Q+++M G + P M P HQ
Sbjct: 267 LDEAIEYLKSLQMQVQIMWMTTGIV---PMMFPGTHQ 300
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 203 (76.5 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 56/162 (34%), Positives = 88/162 (54%)
Query: 9 SGDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVD-DFSDATEISEGMERKPD 67
+ S G SS D E ++ + T+ + TD SDA ++ +R
Sbjct: 194 NASSSSGGSSGCSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIG-NKSNQRSGS 252
Query: 68 NRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
NR R+ +AEVHN SE IN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L+ QL
Sbjct: 253 NR--RSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQL 310
Query: 128 EMM---SAQGGAIFQSPFMSPSGHQSTEVPQI-SP-NVPISP 164
++M S A +P M P + QI SP +P P
Sbjct: 311 QVMWMGSGMAAAAASAPMMFPGVQPQQFIRQIQSPVQLPRFP 352
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 43/106 (40%), Positives = 65/106 (61%)
Query: 62 MERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
ME + +R+ SAE HN SE IN++LK+L+EL+PNC K+D+ S+LD+A++Y+K
Sbjct: 1 MEARRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLK 60
Query: 122 ALRHQLEMM-SAQGGAIFQSPFMSPSGHQSTEVP-QISPNVPISPK 165
+L+ QL+M+ +G A P + H T P QI P P P+
Sbjct: 61 SLQLQLQMLVMGKGMAPVVPPELQQYMHYITADPSQIPPIRPSEPR 106
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 197 (74.4 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 47/120 (39%), Positives = 69/120 (57%)
Query: 47 TDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK 106
T D+ +E ++ R KR+ +AEVHN SE IN+R+K+L+EL+P CNK
Sbjct: 258 TTTDETESRSEETK-QARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK 316
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTE--VPQISPNVPISP 164
SD+AS+LD+A+ Y+K+L+ Q++MMS G + P M P Q + N PI P
Sbjct: 317 SDKASMLDEAIEYMKSLQLQIQMMSMGCGMM---PMMYPGMQQYMPHMAMGMGMNQPIPP 373
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 189 (71.6 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 39/99 (39%), Positives = 63/99 (63%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVN 118
SE R R KR+ +AEVHN SE IN+++K+L+ L+PN +K+D+AS+LDDA+
Sbjct: 17 SEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIE 76
Query: 119 YVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
Y+K L+ Q++M+S + G ++ P + +PQ+S
Sbjct: 77 YLKQLQLQVQMLSMRNG-LYLPPVNLSGAPEHLPIPQMS 114
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 194 (73.4 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 43/112 (38%), Positives = 65/112 (58%)
Query: 40 QTSHSLDTDVDDFSDATEIS-EGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLK 98
+ S L + DD SD + RKP + KR S EVH E NK++++L+
Sbjct: 196 EESTYLSNNSDDESDDAKTQVHARTRKPVTKRKR--STEVHKLYERKRRDEFNKKMRALQ 253
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQS 150
+L+PNC K D+AS+LD+A+ Y++ L+ Q++MMS G + + P M P GH S
Sbjct: 254 DLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMS-MGNGLIRPPTMLPMGHYS 304
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 193 (73.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 53/153 (34%), Positives = 83/153 (54%)
Query: 36 TSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRP--------KRTHSAEVHNQSEXXXX 87
TS SH D +DD ME + + + KR+ +A +HNQSE
Sbjct: 169 TSTSMGSH--DNTIDDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRR 226
Query: 88 XXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG 147
IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q+ MMS P M+
Sbjct: 227 DKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLP-MAMQQ 285
Query: 148 HQSTEVPQISPNVPISPKLGMGSGI-GTGMVDV 179
Q ++ +S N P+ LGMG G+ G G++D+
Sbjct: 286 QQQLQMSLMS-N-PMG--LGMGMGMPGLGLLDL 314
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 190 (71.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 51/160 (31%), Positives = 85/160 (53%)
Query: 11 DSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDA----TEISEG-MERK 65
D+ G SS + E+ + T + H +D D + S + T + M K
Sbjct: 185 DTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNK 244
Query: 66 PDNRP---KRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
R +R+ +AEVHN SE IN+R+K+L+EL+P+C+++D+AS+LD+A++Y+K+
Sbjct: 245 SSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKS 304
Query: 123 LRHQLEMM-----SAQGGAIFQSPFMSPSGHQSTEVPQIS 157
L+ QL++M A A SP M P S + Q++
Sbjct: 305 LQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMA 344
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 185 (70.2 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 35/92 (38%), Positives = 59/92 (64%)
Query: 53 SDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASV 112
S E + G + + KR+ +AEVHN SE IN+++K+L+ L+PN NK+D+AS+
Sbjct: 82 SSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASM 141
Query: 113 LDDAVNYVKALRHQLEMMSAQGGAIFQSPFMS 144
LD+A+ Y+K L+ Q++M+S + G ++S
Sbjct: 142 LDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLS 173
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 184 (69.8 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 49/154 (31%), Positives = 84/154 (54%)
Query: 10 GDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERK--PD 67
G S G ++ + + S+S + S ++T D + ++ +A + E K P
Sbjct: 131 GFSGGGNNNNVQGNSSGTRVSSSSVGASGNETDE-YDCESEEGGEAV-VDEAPSSKSGPS 188
Query: 68 NRP--KRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRH 125
+R KR +AEVHN SE IN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+
Sbjct: 189 SRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQL 248
Query: 126 QLEMMSAQGGAIFQSPFMSPSGH-QSTEVPQISP 158
Q++M++ + G I P P ++ QI P
Sbjct: 249 QVQMLTMRNG-INLHPLCLPGTTLHPLQLSQIRP 281
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 176 (67.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 41/109 (37%), Positives = 65/109 (59%)
Query: 55 ATEISEGMER-KPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVL 113
A E + G E + KR+ +AE+HN +E IN+++K+L++L+P CNKS + S L
Sbjct: 235 AREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTL 294
Query: 114 DDAVNYVKALRHQLE-MMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVP 161
DDA+ YVK+L+ Q++ MMS A FM P H + ++ + P +P
Sbjct: 295 DDAIEYVKSLQSQIQGMMSPMMNAGNTQQFM-P--HMAMDMNRPPPFIP 340
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 173 (66.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 40 QTSHSLDTDVDD-----FSDATEI-SEGMERKPDNRP-KRTHSAEVHNQSEXXXXXXINK 92
Q + +TD+ D + T + ++G E D+ KR+ +A +H SE IN+
Sbjct: 236 QRQPATETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINE 295
Query: 93 RLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTE 152
+K+L+EL+P C K+DR+S+LDD + YVK+L+ Q++M S G + P M Q
Sbjct: 296 MMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSM--GHVMIPPMMYAGNIQQQY 353
Query: 153 VPQISPN-------VPISPKLGMGSGIG 173
+P ++ +P + M G+G
Sbjct: 354 MPHMAMGMNRPPAFIPFPRQAHMAEGVG 381
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 173 (66.0 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 41/112 (36%), Positives = 63/112 (56%)
Query: 57 EISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDA 116
EI E KR+ +A++HN SE IN+R+K+L+EL+P C K+D+ S+L+D
Sbjct: 340 EIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDV 399
Query: 117 VNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGM 168
+ YVK+L+ Q++MMS G M P H+ Q P++ + K GM
Sbjct: 400 IEYVKSLQLQIQMMSMGHG------MMPPMMHEGN-TQQFMPHMAMGMK-GM 443
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 162 (62.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 36/108 (33%), Positives = 59/108 (54%)
Query: 55 ATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLD 114
A I E + KR+ +AE+HN +E IN+R+K+L++L+P CNKS + S+L+
Sbjct: 131 APRIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLE 190
Query: 115 DAVNYVKALRHQL-EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVP 161
D + YVK+L Q+ + M + Q P P Q+ + + P+ P
Sbjct: 191 DVIEYVKSLEMQINQFMPHMAMGMNQPPAYIPFPSQA-HMAGVGPSYP 237
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 29/71 (40%), Positives = 48/71 (67%)
Query: 65 KPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
K N KR A+ HN SE IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+
Sbjct: 84 KQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 143
Query: 125 HQLEMMSAQGG 135
Q++ ++ G
Sbjct: 144 LQVQTLAVMNG 154
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 159 (61.0 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/144 (33%), Positives = 74/144 (51%)
Query: 17 SSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPK----R 72
S + N F S LP Q S T + A+ + G +P +PK R
Sbjct: 76 SHNHPNDALFNGFSTGSLPFHLPQGSGG-QTQTQSQATASATTGGATAQPQTKPKVRARR 134
Query: 73 THSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--M 130
+ + H+ +E I +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++ M
Sbjct: 135 GQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSM 194
Query: 131 SAQGGAIFQSPFMSPSG---HQST 151
S GGA S +S H++T
Sbjct: 195 SRLGGAASASSQISEDAGGSHENT 218
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 149 (57.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 46 DTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNC- 104
D DD + + + + H+A HN +E I +R ++L+ LVP C
Sbjct: 54 DEASDDSGERKKKKKKASSAAGKASRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCD 113
Query: 105 NKSDRASVLDDAVNYVKALRHQLEMMSAQGG---AIFQSPFMSPSGHQSTEVP 154
NKS++AS LD + Y+K+L+HQLE SA G A+ + P + P
Sbjct: 114 NKSNQASTLDQTIQYMKSLQHQLEATSAVGSPAAAVLYPAAVHPQSYMHPPAP 166
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 41/117 (35%), Positives = 69/117 (58%)
Query: 62 MERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
+ +KP R +R + + H+ +E I +R+KSL+ELVPN NK+D+AS+LD+ + YV+
Sbjct: 93 VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVR 152
Query: 122 ALRHQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGM-GSGIGTG 175
L+ Q+++ MS GGA P ++ G + ++ N +P G+ G+G TG
Sbjct: 153 FLQLQVKVLSMSRLGGAGSVGPRLN--GLSAEAGGRL--NALTAPCNGLNGNGNATG 205
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 149 (57.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 16 QSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHS 75
QS + SF ++S T + S L + +DD SD + R KR +
Sbjct: 131 QSVVADRSFKLGFDTSSVGFTEDSEGSMYLSSSLDDESDDAR-PQVPARTRKALVKRKRN 189
Query: 76 AEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
AE +N E INK++++L+ L+PN +K D S+LD+A+NY+ L+ Q++MM+ G
Sbjct: 190 AEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTM--G 247
Query: 136 AIFQSP-FMSPSG 147
F +P M P G
Sbjct: 248 NRFVTPSMMMPLG 260
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 146 (56.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 65 KPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +E I +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 125 HQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDVLFSWS 184
Q++++S MS G V Q+ ++P+S K G S G G + WS
Sbjct: 190 LQVKVLS-----------MSRLGGAGA-VAQLVADIPLSVK-GEASDSG-GNQQIWEKWS 235
Query: 185 S 185
+
Sbjct: 236 T 236
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 148 (57.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 38/116 (32%), Positives = 67/116 (57%)
Query: 29 SSASQLPTSW--HQTSHSLDT----DVDDFSDATEI--SEGMERKPDNRPKRTH-----S 75
+SAS SW ++ SL T D D F +E +EG E++ R++ +
Sbjct: 108 ASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRGRA 167
Query: 76 AEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
A +HN+SE IN+R+++L++L+P +K+D+ S+LDD + ++K L+ Q++ MS
Sbjct: 168 AAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMS 223
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 16 QSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEIS--EGMERKPDNRP--- 70
+++RNE + + + S S + S+ +HS + + T+ + E + +PD
Sbjct: 3 RNNRNEGTHEEEQCSLSDIIYSFCSENHSELNPLQEIFGVTKNNDHEKHDEEPDEESYRM 62
Query: 71 -KRTHSAEVHNQSEXXXXXXINKRLKSLKELVPN-CNKSDRASVLDDAVNYVKALRHQLE 128
KR S E E I ++ L+ L+PN C K D AS L++ + Y+K+L++Q++
Sbjct: 63 AKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVD 122
Query: 129 MMSAQGGAIFQSPFMSPSGHQSTEVPQISP------NVPISPKLGM 168
+MS A +P +P + + + P +SP VP+ P+ M
Sbjct: 123 VMSM---AYTTTPVYTPPFYAAAQAPCMSPWGYYTPGVPMMPQQNM 165
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 149 (57.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/116 (35%), Positives = 63/116 (54%)
Query: 65 KPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +E I+ R+K L+ELVPN NK+++AS+LD+ ++YVK L+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSG-IGTGMV 177
Q+++ MS G A P + TE SP +SP+ G G G V
Sbjct: 371 LQVKVLSMSRLGAAEAVVPLL-------TETQTESPGFLLSPRSSSGERQAGAGAV 419
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 40/125 (32%), Positives = 71/125 (56%)
Query: 37 SWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKS 96
S + +HS +DV+ +++ KP R +R + + H+ +E I++R+K+
Sbjct: 211 SEYPINHS--SDVEPQANSAP-GNSANAKPRTRARRGQATDPHSIAERLRREKISERMKN 267
Query: 97 LKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MSAQG--GAIFQSPFMSPSGHQSTE 152
L+ LVPN NK+D+AS+LD+ ++YVK L+ Q+++ MS G GA+ P + S +
Sbjct: 268 LQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVL--PLLRESQTECHS 325
Query: 153 VPQIS 157
P +S
Sbjct: 326 NPSLS 330
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 144 (55.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 65 KPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +E I +R++SL+ELVP NK+DRA+++D+ V+YVK LR
Sbjct: 141 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 201 LQVKVLSMSRLGGAGAVAPLVT 222
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/140 (28%), Positives = 77/140 (55%)
Query: 43 HSLDTDVDDFS-DATEISEGMERKPDN---RPKRTHSAEVHNQSEXXXXXXINKRLKSLK 98
H + ++FS D++++++ +E K D R +R + + H+ +E I++R+K L+
Sbjct: 144 HKAKKEENNFSNDSSKVTKELE-KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQ 202
Query: 99 ELVPNCNK-SDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
+LVP C+K + +A +LD+ +NYV++L+ Q+E +S + + P + EV
Sbjct: 203 DLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTP 262
Query: 158 PNVPISPKLGMGSGIGTGMV 177
V SP++ + SG MV
Sbjct: 263 MTVVPSPEMVL-SGYSHEMV 281
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +E I +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
Query: 129 M--MSAQGGAIFQSPFMSPSG 147
+ MS GGA S +S +G
Sbjct: 199 VLSMSRLGGAASVSSQISEAG 219
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 141 (54.7 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 31/82 (37%), Positives = 54/82 (65%)
Query: 65 KPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +E I +R+++L+ELVP NK+DRA+++D+ V+YVK LR
Sbjct: 143 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLR 202
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 203 LQVKVLSMSRLGGAGAVAPLVT 224
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 139 (54.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 26/63 (41%), Positives = 44/63 (69%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+K L++LVP CNK +ASVLD+ +NY+++L+HQ+
Sbjct: 129 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQV 188
Query: 128 EMM 130
E M
Sbjct: 189 EFM 191
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 136 (52.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 27/70 (38%), Positives = 47/70 (67%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+K L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 196
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 197 EFLSMKLEAV 206
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 136 (52.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/80 (36%), Positives = 52/80 (65%)
Query: 56 TEISEGMERKPDN---RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRAS 111
TE S ++ KPD R +R + + H+ +E I+K++K L+++VP CNK + +A
Sbjct: 127 TETSSEIQ-KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAG 185
Query: 112 VLDDAVNYVKALRHQLEMMS 131
+LD+ +NYV++L+ Q+E +S
Sbjct: 186 MLDEIINYVQSLQQQVEFLS 205
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 128 (50.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 90 INKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
IN+++K+L++LVPN +K+D+AS+LD+ ++Y+K L+ Q+++MS G + P
Sbjct: 17 INQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMPMGMAMPQLQM 76
Query: 150 STEVPQISPNVPIS-PKLGMGSGIG 173
S + Q++ I + MG G
Sbjct: 77 SV-MAQMAQMAQIGLSMMNMGQAGG 100
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 90 INKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MSAQGGAIFQSPFMSPSG 147
I +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++ MS GGA +P ++
Sbjct: 256 IAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMS 315
Query: 148 HQS 150
+S
Sbjct: 316 SES 318
Score = 36 (17.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 25 DFLESSASQLPTSWHQ 40
DF + S LP W +
Sbjct: 21 DFFDQMLSTLPAVWSE 36
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 129 (50.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 55 ATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLD 114
+ +I +KP R R S + + + I++R++ L+ LVP K D AS+LD
Sbjct: 107 SVDIDPATVKKPKRRNVRI-SDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLD 165
Query: 115 DAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGS-GIG 173
+A+ YVK L+ Q+ +++ G + P Q+ +SP P P G G G+G
Sbjct: 166 EAIRYVKFLKRQIRLLNNNTG--YTPPPPQDQASQAVTTSWVSPPPP--PSFGRGGRGVG 221
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 133 (51.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 90 INKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG--AIFQSPFMSPSG 147
I +R ++L+ LVP C+KS++AS LD + Y+K+L+HQL+ MS G A+ + P
Sbjct: 230 ITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSVVGSPPALLYPAAVHPQS 289
Query: 148 HQSTEVPQISPNVPISP 164
+ P +P+ P
Sbjct: 290 YMHPPPPPPPVTMPMHP 306
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 128 (50.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/121 (29%), Positives = 69/121 (57%)
Query: 13 EKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDN-RPK 71
E +S N S L +S++Q+ + + ++ + + S E E ER+ + R +
Sbjct: 93 EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNRE--EEKEREVVHVRAR 150
Query: 72 RTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQLEMM 130
R + + H+ +E IN+RLK L+++VP C K+ A++LD+ +NYV++L++Q+E +
Sbjct: 151 RGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFL 210
Query: 131 S 131
S
Sbjct: 211 S 211
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 129 (50.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 35/117 (29%), Positives = 63/117 (53%)
Query: 17 SSRNENSFDF-LESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHS 75
SSR +N D E S+ Q S + + + + D+++ E R KR +
Sbjct: 95 SSRIQNVGDQQTEVSSQQERISMEEDNQKSCSKMQSKEDSSDGDGTKEDYVHVRAKRGQA 154
Query: 76 AEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLEMMS 131
H+ +E I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+E +S
Sbjct: 155 TNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLS 211
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 26/64 (40%), Positives = 43/64 (67%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +E IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 629 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 688
Query: 128 EMMS 131
E +S
Sbjct: 689 EFLS 692
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 129 (50.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 39 HQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLK 98
H+ S +T + S + E + E R +R + H+ +E I++R++ L+
Sbjct: 179 HKNDQSKETVNKESSQSEEAPK--ENYIHMRARRGQATNSHSLAERVRREKISERMRLLQ 236
Query: 99 ELVPNCNK-SDRASVLDDAVNYVKALRHQLEMMS 131
ELVP CNK + +A +LD+ +NYV++L+ Q+E +S
Sbjct: 237 ELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 129 (50.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/99 (28%), Positives = 56/99 (56%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+ L++LVP CN+ + +A +LD+ +NYV++L+ Q+
Sbjct: 192 RARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQV 251
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKL 166
E +S + + +P M + + S I P ++ L
Sbjct: 252 EFLSMKLATV--NPRMEFNANASLSTEMIQPGESLTQSL 288
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 128 (50.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E IN R+K L+ELVP C+K A VLD+ +N+V+ L+ Q+
Sbjct: 186 RARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQV 245
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 246 EMLSMRLAAV 255
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 127 (49.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 197 EFLSMKLEAV 206
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 125 (49.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 4 NFSVASGDSEKGQSSRNENSFDFLESS---ASQLPTSWHQTSHSLDTDVDDFSDATEISE 60
N+ SG+ + S+ + L SS SQ+ Q+S + T V SD +
Sbjct: 118 NYDYLSGNIDVSPGSKRSREMEALFSSPEFTSQM--KGEQSSGQVPTGVSSMSDMN-MEN 174
Query: 61 GMERKPDNRPKRTHSAEVHNQS--EXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAV 117
ME R + H +S E I+ R++ L+ELVPN +K ++ A +L++AV
Sbjct: 175 LMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAV 234
Query: 118 NYVKALRHQLEMMSAQ 133
YVK L+ Q++ ++ +
Sbjct: 235 EYVKVLQRQIQELTEE 250
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 127 (49.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 24/64 (37%), Positives = 44/64 (68%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 165 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQV 224
Query: 128 EMMS 131
E +S
Sbjct: 225 EFLS 228
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 123 (48.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 53 SDATEISEGME-RKPDN----RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS 107
S+ E G E +KP + R KR + + H+ +E IN+RLK L++LVP C K+
Sbjct: 84 SEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKA 143
Query: 108 -DRASVLDDAVNYVKALRHQLEMMS 131
A +LD ++YV++L++Q+E +S
Sbjct: 144 MGMAVMLDVIIDYVRSLQNQIEFLS 168
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 127 (49.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 33/111 (29%), Positives = 63/111 (56%)
Query: 55 ATEISEGMERKPDN-RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASV 112
A E SE + + + R +R + H+ +E I++R+K L++LVP C+K + +A +
Sbjct: 234 AKETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVM 293
Query: 113 LDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPIS 163
LD+ +NYV++L+ Q+E +S + + ++ G S ++ + P VP S
Sbjct: 294 LDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRF-PGVPSS 343
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 128 (50.1 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 11 DSEKGQSSRNENSFDFLESSASQLPTSWHQTSHS-LDTDVDDFSDATEISEGMERKPDNR 69
DS + S N+ + + S S LP ++HS L+ V +++ + E+KP R
Sbjct: 347 DSSNKKRSPVSNNEEGMLSFTSVLPCD---SNHSDLEASVAKEAESNRVVVEPEKKPRKR 403
Query: 70 PKRTHSAEV----HNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRH 125
++ + H ++E +N+R SL+ +VPN +K D+AS+L DA++Y+ L+
Sbjct: 404 GRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKS 463
Query: 126 QLE 128
+L+
Sbjct: 464 KLQ 466
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 127 (49.8 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 30/105 (28%), Positives = 56/105 (53%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +E I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQI----SPNVPISPKLGM 168
E +S + + + G + + Q+ S P P + M
Sbjct: 364 EFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSM 408
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 126 (49.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 24/64 (37%), Positives = 44/64 (68%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 128 EMMS 131
E +S
Sbjct: 319 EFLS 322
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 127 (49.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHS--AEV--HNQSEXXXXXXINKRLKSLKELVPNCNK 106
+++DA E +P R +R + AE H ++E +N+R +L+ +VPN +K
Sbjct: 402 EWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISK 461
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ L +L++M A+
Sbjct: 462 MDKASLLGDAVSYINELHAKLKVMEAE 488
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 127 (49.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/129 (26%), Positives = 70/129 (54%)
Query: 6 SVASGDSEKGQSS--RNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGME 63
S +S K ++S + N+ + + S ++ + ++ + + HS D + +A + E E
Sbjct: 339 SFCGNESSKKRTSVSKGSNNDEGMLSFSTVVRSAANDSDHS-DLEASVVKEAIVV-EPPE 396
Query: 64 RKPDNRPKRTHSAEV----HNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNY 119
+KP R ++ + H ++E +N+R SL+ +VPN +K D+AS+L DA++Y
Sbjct: 397 KKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISY 456
Query: 120 VKALRHQLE 128
+ L+ +L+
Sbjct: 457 INELKSKLQ 465
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 122 (48.0 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 23/64 (35%), Positives = 44/64 (68%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E IN+RL+ L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 146 RARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQV 205
Query: 128 EMMS 131
E +S
Sbjct: 206 EFLS 209
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 122 (48.0 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 21/45 (46%), Positives = 35/45 (77%)
Query: 90 INKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
++ +++ L++LVPNC+K+D+ SVLD + Y+K L+ QL+MMS G
Sbjct: 150 MSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMSTVG 194
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 121 (47.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 64 RKPDNRPKRTHS-AEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
R+ ++ +R AE H +E IN++ K L+ LVP C+K ++S LD ++Y+K+
Sbjct: 141 RRVKHKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTIHYMKS 200
Query: 123 LRHQLEMM 130
L+ QL+ M
Sbjct: 201 LQQQLQAM 208
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 125 (49.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/64 (37%), Positives = 43/64 (67%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I +R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 302 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 361
Query: 128 EMMS 131
E +S
Sbjct: 362 EFLS 365
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 123 (48.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/64 (37%), Positives = 43/64 (67%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 128 EMMS 131
E +S
Sbjct: 265 EFLS 268
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 118 (46.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/139 (30%), Positives = 73/139 (52%)
Query: 11 DSEKGQSSRNENSF-DFLE-------SSASQL---P-TSWHQ----TSHSLDTDVDDFSD 54
D Q++RN +S D L+ SS S L P T+W +S++ D
Sbjct: 61 DGSNHQTNRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWRDGQSLSSYNSSDDEKALGL 120
Query: 55 ATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLD 114
+ S+ ++RK + R +++ + IN RLK+L+ LVPN K D +++L+
Sbjct: 121 VSNTSKSLKRKA--KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLE 178
Query: 115 DAVNYVKALRHQLEMMSAQ 133
DAV+YVK L+ Q++++S++
Sbjct: 179 DAVHYVKFLQLQIKLLSSE 197
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 122 (48.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/129 (27%), Positives = 67/129 (51%)
Query: 12 SEKGQSSRNENSF--DFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNR 69
S KG SS+ D E + TS++ T+ + + + +G R
Sbjct: 169 SSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEK-QPSDSLKDGYIHMRARR 227
Query: 70 PKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLE 128
+ T+S H+ +E I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+E
Sbjct: 228 GQATNS---HSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 284
Query: 129 MMSAQGGAI 137
+S + A+
Sbjct: 285 FLSMKLSAV 293
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/80 (32%), Positives = 51/80 (63%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+K L+ LVP C+K + +A +LD+ ++YV++L++Q+
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQV 240
Query: 128 EMMSAQGGAIFQSPFMSPSG 147
E +S + ++ SP M G
Sbjct: 241 EFLSMKLASL--SPLMYEFG 258
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/64 (37%), Positives = 43/64 (67%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 278 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 337
Query: 128 EMMS 131
E +S
Sbjct: 338 EFLS 341
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 120 (47.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 12 SEKGQSSRNENSFDFLESSAS-QLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRP 70
+ K + R + + +E AS +P S + + + +DA S+G R
Sbjct: 164 ARKAEPKRAKKAKQTVEKDASVAIPNGSCSISDNDSSSSQEVADAGATSKGKSRAGRGAA 223
Query: 71 KRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
S + E IN+RLK+L+ LVPN K D +++L++AV+YVK L+ Q++++
Sbjct: 224 TDPQSLYARKRRER-----INERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 278
Query: 131 SA 132
S+
Sbjct: 279 SS 280
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 118 (46.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 26/83 (31%), Positives = 49/83 (59%)
Query: 53 SDATEISEGMERKPDN---RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKS-D 108
S ATE E D R +R + + H+ +E I++++ +L++++P CNK
Sbjct: 135 SKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIG 194
Query: 109 RASVLDDAVNYVKALRHQLEMMS 131
+A VLD+ +NY+++L+ Q+E +S
Sbjct: 195 KALVLDEIINYIQSLQRQVEFLS 217
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 120 (47.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 35/110 (31%), Positives = 59/110 (53%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK---SDRASVLDDAVNYVKALRH 125
R +R + + H+ +E I +R+K+L+ELVPN NK +D+AS+LD+ ++YVK L+
Sbjct: 251 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQL 310
Query: 126 QLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTG 175
Q++ S + MS G + P ++ +S + G G G G
Sbjct: 311 QVKA-STYTKLLIHVLSMSRLGGAAAVAPLVAD---MSSE-GRGGGAANG 355
Score = 36 (17.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 25 DFLESSASQLPTS-W 38
DFL+ S LP S W
Sbjct: 34 DFLDQMLSSLPPSAW 48
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 119 (46.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +E I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 261 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 320
Query: 128 EMMS 131
E +S
Sbjct: 321 EFLS 324
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 118 (46.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/70 (32%), Positives = 46/70 (65%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R ++ + H+ +E I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 177 RARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQV 236
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 237 EFLSMKLSAV 246
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 116 (45.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 22/64 (34%), Positives = 43/64 (67%)
Query: 69 RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +E I++R+++L+ LVP C+K + +A +LD+ +NYV+ L+ Q+
Sbjct: 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQV 196
Query: 128 EMMS 131
E +S
Sbjct: 197 EFLS 200
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 119 (46.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 49 VDDFSDATEISEGMERKPDNRPKRTHSAEVHN-QSEXXXXXXINKRLKSLKELVPNCNKS 107
VD SD ++ + E P + K ++ N +E +N RL +L+ LVP K
Sbjct: 285 VDSGSDCSDQIDD-EDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKL 343
Query: 108 DRASVLDDAVNYVKALRHQ 126
DRAS+L DA+NYVK L+++
Sbjct: 344 DRASILGDAINYVKELQNE 362
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 27/89 (30%), Positives = 53/89 (59%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDR 109
+D AT+ S +++ ++R + S + + IN+RL+ L++LVPN K D
Sbjct: 137 EDSIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDI 196
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
+++L++AV YVK L+ Q++++S+ +F
Sbjct: 197 STMLEEAVQYVKFLQLQIKLLSSDDTWMF 225
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 23/74 (31%), Positives = 44/74 (59%)
Query: 58 ISEGMERKPDNRPKRTHSAEV-HNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDA 116
+ E RK +P + H ++E +N+R +L+ +VPN +K D+AS+L DA
Sbjct: 374 VDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 433
Query: 117 VNYVKALRHQLEMM 130
++Y+K L+ ++++M
Sbjct: 434 ISYIKELQEKVKIM 447
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 36 TSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLK 95
T+W SL DD + +G R S + E IN+RLK
Sbjct: 141 TNWVD-GQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREK-----INERLK 194
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
+L+ LVPN K D +++L++AV+YVK L+ Q++++S+
Sbjct: 195 TLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 231
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
Identities = 33/127 (25%), Positives = 63/127 (49%)
Query: 10 GDSEKGQSSRNENSFDFLESSASQLPT-SWHQTSHSLDTD---VDDFSDATEISEGMERK 65
G+ E+G++ + + S + T + S+ D D D S + S+ +
Sbjct: 204 GEEEEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLN 263
Query: 66 PDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRH 125
R R + + + IN+RL+ L+ LVPN K D +++L++AV+YVK L+
Sbjct: 264 GKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQL 323
Query: 126 QLEMMSA 132
Q++++S+
Sbjct: 324 QIKLLSS 330
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 32/116 (27%), Positives = 59/116 (50%)
Query: 45 LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNC 104
L+ + D+ +++ + +E ++ + K+ + +E +N RL L+ +VP
Sbjct: 274 LNYESDEINESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKI 333
Query: 105 NKSDRASVLDDAVNYVKALRHQL-----EMMSAQGGAIFQSPFMSPSGHQSTEVPQ 155
+K DRAS+L DA++Y+K L ++ E+ S G++ P S S H T PQ
Sbjct: 334 SKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSL---PPTSSSFHPLTPTPQ 386
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 107 (42.7 bits), Expect = 0.00026, P = 0.00026
Identities = 41/155 (26%), Positives = 81/155 (52%)
Query: 4 NFSVASGDSEKGQSSRNENS-----FDFLESS--ASQLPTSWHQTSHSLDTDVDDFSDAT 56
+FS+ S + ++ NS FD+ + S +++ T ++ +DT+ + ++ +
Sbjct: 37 SFSLISSEGYDTMTTEFVNSSTNVCFDYQDDSFVSAEETTIGNKRKVQMDTENELMTNRS 96
Query: 57 -EISEGMERKPDNRPKRTHSAEVHNQSEXXXXXX--INKRLKSLKELVPNCNKSDRASVL 113
E+ M K + SAE +QS IN+RL+ L+EL+PN K D +++L
Sbjct: 97 KEVRTKMS--VSKACKHSVSAE-SSQSYYAKNRRQRINERLRILQELIPNGTKVDISTML 153
Query: 114 DDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGH 148
++A+ YVK L Q++++S+ ++ +P SG+
Sbjct: 154 EEAIQYVKFLHLQIKLLSSDEMWMY-APLAFDSGN 187
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 109 (43.4 bits), Expect = 0.00031, P = 0.00031
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 21 ENSFDFLESSASQLP--TSWHQTSHSLDTDVDDFS-DATEISEGMERKPDNRPKRTHSAE 77
ENS+D + S S P SW S S D+D + F+ + S G D+ AE
Sbjct: 2 ENSYDSSKWSDSTTPYMVSWSLQSESSDSDWNRFNLGFSSSSFGGNFPADDCVGGIEKAE 61
Query: 78 V----HNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
H +E IN L +L++LVPN +K D+A++L + VK L+ +
Sbjct: 62 SLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK 114
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00032
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 65 KPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP PK S N+ E I++RLK L+ELVPN K D ++L+ A++YVK L+
Sbjct: 197 KPTTSPKDPQSLAAKNRRER-----ISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQ 251
Query: 125 HQLEMMS------AQGG 135
Q+++++ AQGG
Sbjct: 252 VQVKVLATDEFWPAQGG 268
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 110 (43.8 bits), Expect = 0.00033, P = 0.00032
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 48 DVDDFSDATEISEGMERKPDNRPKRTHSA--EVHNQSEXXXXXXINKRLKSLKELVP--- 102
D+DD +A S R + +R ++ H+++E IN+R +SL +++P
Sbjct: 5 DIDDQLEADVYSNLPSRNDSSTGRRNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQNQ 64
Query: 103 NCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPF-MSP--SGHQST----EVPQ 155
N K D+AS L + + Y+ L+ ++ M +QSP + P + H S + PQ
Sbjct: 65 NDQKRDKASFLLEVIEYIHFLQEKVHMYEDSHQMWYQSPTKLIPWRNSHGSVAEENDHPQ 124
Query: 156 ISPNVPISPKLGMGSG 171
I + + K+ SG
Sbjct: 125 IVKSFSSNDKVAASSG 140
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 109 (43.4 bits), Expect = 0.00034, P = 0.00034
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 28 ESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGME-RKPDNRPKRTHSAEV-HNQSEXX 85
+++AS L + S S D DV AT + RKP R + + H ++E
Sbjct: 43 DAAASALAAAAASQSASND-DVPRNPPATTTTTKRRGRKPGPRSGGGGAPPIGHVEAERQ 101
Query: 86 XXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
+N+R L+ VP ++ D+AS+L DAV+Y+ LR ++E + A+
Sbjct: 102 RREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAE 149
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 88 (36.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 1 VPWNFSVASGDSEKGQSSRNENSFDFLESSA--SQLPTSWHQTSHSLDTDVDDFSDAT-- 56
VP N S A+ D K + + ++S + SA +Q+P + D + ++
Sbjct: 130 VPSNSS-ANLDRVKTEPAETDSSQRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTK 188
Query: 57 --EISEGMERKP--DNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNK 106
+ SE E+ P R +R + + H+ +E IN R+K L+ELVP C+K
Sbjct: 189 KNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242
Score = 64 (27.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAI 137
A VLD+ +N+V++L+ Q+EM+S + A+
Sbjct: 294 ALVLDEIINHVQSLQRQVEMLSMRLAAV 321
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
Identities = 33/127 (25%), Positives = 60/127 (47%)
Query: 46 DTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCN 105
+ D +D++D + S R +T + SE + +L +L+ LVPN
Sbjct: 100 EEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLI-SERRRRGRMKDKLYALRSLVPNIT 158
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ--STEVPQISP----N 159
K D+AS++ DAV YV+ L+ Q + + + + ++ S G+Q + + + P N
Sbjct: 159 KMDKASIVGDAVLYVQELQSQAKKLKSDIAGL-EASLNSTGGYQEHAPDAQKTQPFRGIN 217
Query: 160 VPISPKL 166
P S K+
Sbjct: 218 PPASKKI 224
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 109 (43.4 bits), Expect = 0.00043, P = 0.00043
Identities = 22/71 (30%), Positives = 44/71 (61%)
Query: 60 EGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNY 119
+G E ++ +R ++ E + + I++RL++L+ELVP+ K D ++LD A++Y
Sbjct: 181 QGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISY 240
Query: 120 VKALRHQLEMM 130
VK ++ QL ++
Sbjct: 241 VKFMQMQLRVL 251
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 109 (43.4 bits), Expect = 0.00047, P = 0.00047
Identities = 34/133 (25%), Positives = 67/133 (50%)
Query: 4 NFSVASGDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFS-DATEISEGM 62
+F + S K ++ + + S+ + + TS L + F+ + T++S+
Sbjct: 133 SFGLTSNSMSKPATNHGNGDWLYSGSTIVNIGSRHESTSPKLAGNKRPFTGENTQLSKKP 192
Query: 63 ERKPDNR--PKRTHSA-EVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNY 119
+ + PK T S + + + I++RLK L+ELVPN K D ++L+ A+ Y
Sbjct: 193 SSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGY 252
Query: 120 VKALRHQLEMMSA 132
VK L+ Q+++++A
Sbjct: 253 VKFLQVQVKVLAA 265
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 107 (42.7 bits), Expect = 0.00056, P = 0.00056
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 2 PWNFSVASGDSEKGQSSRN--ENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEIS 59
P +F SG G S ++D+L ++ PT + S ++T ++S
Sbjct: 102 PADFLSGSGSGTDGYFSNFGIPANYDYLSTNVDISPT---KRSRDMETQFSSQLKEEQMS 158
Query: 60 EG----MERKPDN----------RPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCN 105
G M+ D R KR + + +E I+ R++ L+ELVPN +
Sbjct: 159 GGISGMMDMNMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMD 218
Query: 106 K-SDRASVLDDAVNYVKALRHQLEMMSAQ 133
K ++ A +L++AV YVKAL+ Q++ ++ Q
Sbjct: 219 KQTNTADMLEEAVEYVKALQSQIQELTEQ 247
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 104 (41.7 bits), Expect = 0.00080, P = 0.00080
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 54 DATEISEGMERKPDNRPKRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVL 113
DA E E +P R R S+E + + +++R+++L+ LVP + D AS+L
Sbjct: 101 DAAEEEEAAAPRPRRRNARV-SSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASML 159
Query: 114 DDAVNYVKALRHQLEMMSAQGGAI 137
++A+ YVK L+ ++ + A+
Sbjct: 160 EEAIRYVKFLKGHVQSLERAAAAL 183
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 107 (42.7 bits), Expect = 0.00087, P = 0.00086
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 14 KGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVD------DFSDATEISE--GMERK 65
K ++ N S SS+S TS + S DT + +FS+ + + G +RK
Sbjct: 57 KTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVSMDQKVGSKRK 116
Query: 66 P--DNRPKRT-HSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
+N +R H + H +E +N+RL +L L+P K+D+A+VL+DA+ ++K
Sbjct: 117 DCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQ 176
Query: 123 LRHQLEMMSAQ 133
L+ +++ + +
Sbjct: 177 LQERVKKLEEE 187
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 107 (42.7 bits), Expect = 0.00099, P = 0.00099
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 71 KRTHSAEVHNQSEXXXXXXINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
K ++ H+++E IN L L+ L+PN K+D+AS+L + + +VK L+ Q M
Sbjct: 117 KALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAM 176
Query: 131 SAQGGA 136
G A
Sbjct: 177 MEDGAA 182
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.125 0.357 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 201 195 0.00078 111 3 11 23 0.41 33
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 87
No. of states in DFA: 602 (64 KB)
Total size of DFA: 167 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.43u 0.08s 20.51t Elapsed: 00:00:01
Total cpu time: 20.44u 0.08s 20.52t Elapsed: 00:00:01
Start: Tue May 21 05:03:35 2013 End: Tue May 21 05:03:36 2013