BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044343
(201 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 82/109 (75%), Gaps = 3/109 (2%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHNQSERRRRDRIN+++++L+EL+PN NK+D+AS+LD+A++Y+K L+ QL+MM
Sbjct: 731 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMM 790
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGS-GIGTGMVD 178
S + G P + P G Q ++PQ+ P V P +GM G+G GM++
Sbjct: 791 SIRTGMTL-PPMVMPPGLQHMQMPQM-PQVAAMPSMGMVQMGLGMGMME 837
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q+++M
Sbjct: 368 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 427
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPNVP 161
S G ++ P M P+G Q P ++P P
Sbjct: 428 S-MGAGLYMPPMMLPAGMQHMHAPHMAPFSP 457
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 79/122 (64%), Gaps = 9/122 (7%)
Query: 48 DVDDFS----DATEISEGMERKPDNR----PKRTHSAEVHNQSERRRRDRINKRLKSLKE 99
D DD D E S G ++ R KR+ +AEVHN SER+RRDRIN+++++L+E
Sbjct: 401 DTDDSECHSEDVEEESAGAKKTAGGRGGAGSKRSRAAEVHNLSERKRRDRINEKMRALQE 460
Query: 100 LVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPN 159
L+PNCNK D+AS+LD+A+ Y+K L+ Q+++MS G ++ P M P+G Q P ++P
Sbjct: 461 LIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS-MGAGLYMPPMMLPAGMQHMHAPHMAPF 519
Query: 160 VP 161
P
Sbjct: 520 SP 521
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Query: 36 TSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLK 95
T + S S D D DD S GM R KR+ +AEVHN SERRRRDRIN++++
Sbjct: 149 TLQAECSASQDDDPDDESG------GMRRSCSRGAKRSRTAEVHNLSERRRRDRINEKMR 202
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQ 155
+L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P Q ++P
Sbjct: 203 ALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGSGLCIPPMLLPPAMQHLQIPP 261
Query: 156 ISPNVP 161
+ + P
Sbjct: 262 AAAHFP 267
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 7/122 (5%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKE 99
+ S S D D DD S GM R KR+ +AEVHN SERRRRDRIN+++++L+E
Sbjct: 356 ECSASQDDDPDDESG------GMRRSCSRGAKRSRTAEVHNLSERRRRDRINEKMRALQE 409
Query: 100 LVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPN 159
L+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P Q ++P + +
Sbjct: 410 LIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGSGLCIPPMLLPPAMQHLQIPPAAAH 468
Query: 160 VP 161
P
Sbjct: 469 FP 470
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 9/119 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNR-PKRTHSAEVHNQSERRRRDRINKRLKSLK 98
+ S S D D+DD G+ RK R KR+ +AEVHN SERRRRDRIN+++++L+
Sbjct: 284 ECSASQDDDLDD-------EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQ 336
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P+ Q ++P ++
Sbjct: 337 ELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGTGLCIPPMLLPTAMQHLQIPPMA 394
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 23/124 (18%)
Query: 49 VDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
VD S+ + E +P RP +RT +AEVHN SERRRRDRIN++L++L+ELVP+CN
Sbjct: 206 VDSLSEVAD-----ETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCN 260
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
K+D+AS+LD+A+ Y+K+L+ Q+++M G + P M P HQ + P
Sbjct: 261 KTDKASILDEAIEYLKSLQMQVQIMWMTTGIV---PMMFPGTHQ------------LMPP 305
Query: 166 LGMG 169
+GMG
Sbjct: 306 MGMG 309
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 9/119 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNR-PKRTHSAEVHNQSERRRRDRINKRLKSLK 98
+ S S D D+DD G+ RK R KR+ +AEVHN SERRRRDRIN+++++L+
Sbjct: 356 ECSASQDDDLDD-------EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQ 408
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P+ Q ++P ++
Sbjct: 409 ELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGTGLCIPPMLLPTAMQHLQIPPMA 466
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 23/124 (18%)
Query: 49 VDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
VD S+ + E +P RP +RT +AEVHN SERRRRDRIN++L++L+ELVP+CN
Sbjct: 205 VDSLSEVAD-----ETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCN 259
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
K+D+AS+LD+A+ Y+K+L+ Q+++M G + P M P HQ + P
Sbjct: 260 KTDKASILDEAIEYLKSLQMQVQIMWMTTGIV---PMMFPGTHQ------------LMPP 304
Query: 166 LGMG 169
+GMG
Sbjct: 305 MGMG 308
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 9/119 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNR-PKRTHSAEVHNQSERRRRDRINKRLKSLK 98
+ S S D D+DD G+ RK R KR+ +AEVHN SERRRRDRIN+++++L+
Sbjct: 424 ECSASQDDDLDD-------EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQ 476
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P+ Q ++P ++
Sbjct: 477 ELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGTGLCIPPMLLPTAMQHLQIPPMA 534
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 23/124 (18%)
Query: 49 VDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
VD S+ + E +P RP +RT +AEVHN SERRRRDRIN++L++L+ELVP+CN
Sbjct: 305 VDSLSEVAD-----ETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCN 359
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
K+D+AS+LD+A+ Y+K+L+ Q+++M G + P M P HQ + P
Sbjct: 360 KTDKASILDEAIEYLKSLQMQVQIMWMTTGIV---PMMFPGTHQ------------LMPP 404
Query: 166 LGMG 169
+GMG
Sbjct: 405 MGMG 408
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 23/124 (18%)
Query: 49 VDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
VD S+ + E +P RP +RT +AEVHN SERRRRDRIN++L++L+ELVP+CN
Sbjct: 202 VDSLSEVAD-----ETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCN 256
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
K+D+AS+LD+A+ Y+K+L+ Q+++M G + P M P HQ + P
Sbjct: 257 KTDKASILDEAIEYLKSLQMQVQIMWMTTGIV---PMMFPGTHQ------------LMPP 301
Query: 166 LGMG 169
+GMG
Sbjct: 302 MGMG 305
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 15/128 (11%)
Query: 38 WHQ--------TSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDR 89
WHQ S S D D+DD S A + R + KR+ +AEVHN SERRRRDR
Sbjct: 367 WHQQKRKIQAECSASQDEDLDDESGA------LLRSTNRSMKRSRTAEVHNLSERRRRDR 420
Query: 90 INKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
IN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P Q
Sbjct: 421 INEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGTGLCIPPMLLPPAMQ 479
Query: 150 STEVPQIS 157
++ Q++
Sbjct: 480 HLQLSQMA 487
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%), Gaps = 7/113 (6%)
Query: 46 DTDVDDFSDATEISEG-MERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNC 104
D+ +D D + E R+P + +R +AEVHNQSERRRRDRIN+++K+L+ELVP+C
Sbjct: 115 DSRCEDADDCEAVDETRTSRRPAGK-RRARAAEVHNQSERRRRDRINEKMKALQELVPHC 173
Query: 105 NKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
NKSD+AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ +PQ++
Sbjct: 174 NKSDKASILDEAIEYLKSLQLQVQIMWMTTG---MAPMMFPGAHQL--MPQMA 221
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 9/119 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNR-PKRTHSAEVHNQSERRRRDRINKRLKSLK 98
+ S S D D+DD G+ RK R KR+ +AEVHN SERRRRDRIN+++++L+
Sbjct: 412 ECSASQDDDLDD-------EPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQ 464
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P + P+ Q ++P ++
Sbjct: 465 ELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGTGLCIPPMLLPTAMQHLQIPPMA 522
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
Query: 54 DATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRA 110
DA S ++RKP + +R+ +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+A
Sbjct: 292 DAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 351
Query: 111 SVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
S+LD+A+ Y+K L+ Q++MM GG M P HQ +PQ+ P
Sbjct: 352 SMLDEAIEYLKTLQMQVQMMWMGGGMAAPPAVMFPGMHQY--LPQMGP 397
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 23/124 (18%)
Query: 49 VDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
VD S+ + E +P RP +RT +AEVHN SERRRRDRIN++L++L+ELVP+CN
Sbjct: 381 VDSLSEVAD-----ETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCN 435
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
K+D+AS+LD+A+ Y+K+L+ Q+++M G + P M P HQ + P
Sbjct: 436 KTDKASILDEAIEYLKSLQMQVQIMWMTTGIV---PMMFPGTHQ------------LMPP 480
Query: 166 LGMG 169
+GMG
Sbjct: 481 MGMG 484
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 46 DTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
D D+D + S +R+P + +RT +AEVHN SERRRRDRIN+++++L+ELVP+CN
Sbjct: 222 DADLDTVDETPPSSR--DRRPASNKRRTRAAEVHNMSERRRRDRINEKMRALQELVPHCN 279
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
K+D+AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ
Sbjct: 280 KTDKASILDEAIEYLKSLQMQVQIMWMSTG---MAPMMIPGAHQ 320
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHNQSERRRRDRIN+++++L+EL+PN NK+D+AS+LD+A+ Y+K L+ QL+MM
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMM 651
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQI 156
S + G P + P G Q ++PQ+
Sbjct: 652 SIRTGMTL-PPMVMPPGLQHMQMPQM 676
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q+++M
Sbjct: 459 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISP 158
S G +F P M P P I P
Sbjct: 519 S-MGAGLFMPPMMFPGAMAPMNTPHIYP 545
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
Query: 54 DATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRA 110
DA S ++RKP + +R+ +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+A
Sbjct: 13 DAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 72
Query: 111 SVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
S+LD+A+ Y+K L+ Q++MM GG M P HQ +PQ+ P
Sbjct: 73 SMLDEAIEYLKTLQMQVQMMWMGGGMAAPPAVMFPGMHQY--LPQMGP 118
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 86/119 (72%), Gaps = 5/119 (4%)
Query: 45 LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNC 104
+ DV+ S++ +++ +KP KR +A+VHN SERRRRDRIN+++++L+ELVP+C
Sbjct: 211 MQQDVE--SESADVTCETAQKPATA-KRRRAAQVHNLSERRRRDRINEKMRALQELVPHC 267
Query: 105 NKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG-HQSTE-VPQISPNVP 161
NK+D+AS+LD+A+ Y+K+L+ QL++M A GG + +P M P+G HQ + + IS +P
Sbjct: 268 NKTDKASMLDEAIEYLKSLQLQLQVMWAMGGRMAPAPVMFPAGAHQYMQRMATISSKMP 326
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MM
Sbjct: 465 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 524
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQIS 157
S G ++ M P+G Q P ++
Sbjct: 525 S-MGAGLYMPQMMLPAGMQHMHAPHMA 550
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 18/175 (10%)
Query: 8 ASGDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDF----SDATEISEGME 63
SG SE G S R + D +SS + + DTD+DD + E SE M
Sbjct: 114 TSGLSEAGVSGRQSSIGD--QSSPRRDSEPCKKKKAHNDTDLDDLDCESEEGQEPSEEMS 171
Query: 64 RKPDNR--PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
+ +R KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K
Sbjct: 172 KPAPSRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLK 231
Query: 122 ALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS-------PNVPISPKLGMG 169
L+ Q++M+S + G I +P P QS ++PQI +PI+ +GMG
Sbjct: 232 QLQLQVQMLSMKSG-INLAPMCMPGQLQSMQLPQICMGFTTENGTLPIT--MGMG 283
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 75/113 (66%), Gaps = 4/113 (3%)
Query: 32 SQLPTSWHQTSH-SLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRI 90
SQL S HQT S+ D +D D + G+ R KR +AEVHN SERRRRDRI
Sbjct: 288 SQLKRSSHQTLEWSVSQDDEDLDDE---AGGLRRSAARSTKRGRTAEVHNMSERRRRDRI 344
Query: 91 NKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFM 143
N+++++L+EL+PNCNK D+AS+L++A+ Y+K L+ Q++MMS G A P M
Sbjct: 345 NEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMGTAGMCMPPM 397
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 75/113 (66%), Gaps = 4/113 (3%)
Query: 32 SQLPTSWHQTSH-SLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRI 90
SQL S HQT S+ D +D D + G+ R KR +AEVHN SERRRRDRI
Sbjct: 284 SQLKRSSHQTLEWSVSQDDEDLDDE---AGGLRRSAARSTKRGRTAEVHNMSERRRRDRI 340
Query: 91 NKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFM 143
N+++++L+EL+PNCNK D+AS+L++A+ Y+K L+ Q++MMS G A P M
Sbjct: 341 NEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMGTAGMCMPPM 393
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 75/113 (66%), Gaps = 4/113 (3%)
Query: 32 SQLPTSWHQTSH-SLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRI 90
SQL S HQT S+ D +D D + G+ R KR +AEVHN SERRRRDRI
Sbjct: 284 SQLKRSSHQTLEWSVSQDDEDLDDE---AGGLRRSAARSTKRGRTAEVHNMSERRRRDRI 340
Query: 91 NKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFM 143
N+++++L+EL+PNCNK D+AS+L++A+ Y+K L+ Q++MMS G A P M
Sbjct: 341 NEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSTMGTAGMCMPPM 393
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 73/109 (66%), Gaps = 10/109 (9%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ SAEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K+L+ Q+++M
Sbjct: 338 KRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 397
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDV 179
S G + P M P G + P + +GMG G+ D+
Sbjct: 398 SMASG-YYMPPVMFPPGMG---------HYPAAMAMGMGMPYAMGLPDL 436
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 72/105 (68%), Gaps = 6/105 (5%)
Query: 48 DVDDFSDATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNC 104
D D S+ E E K R +R+ +AEVHNQSERRRRDRIN++++SL+EL+P+C
Sbjct: 206 DSDSRSEDAEFEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHC 265
Query: 105 NKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
NK+D+AS+LD+A+ Y+K+L+ QL++M G +P M P HQ
Sbjct: 266 NKADKASILDEAIEYLKSLQMQLQIMWMTTG---MAPMMFPGAHQ 307
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 8/111 (7%)
Query: 45 LDTDVDDFS---DATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLK 98
LDT D S DA S + RKP + +R+ +AEVHN SERRRRDRIN+++++L+
Sbjct: 283 LDTTEDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQ 342
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL+MM G+ P M P HQ
Sbjct: 343 ELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWM--GSGMAPPVMFPGVHQ 391
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 8/111 (7%)
Query: 45 LDTDVDDFS---DATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLK 98
LDT D S DA S + RKP + +R+ +AEVHN SERRRRDRIN+++++L+
Sbjct: 283 LDTTEDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQ 342
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL+MM G+ P M P HQ
Sbjct: 343 ELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWM--GSGMAPPVMFPGVHQ 391
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 8/111 (7%)
Query: 45 LDTDVDDFS---DATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLK 98
LDT D S DA S + RKP + +R+ +AEVHN SERRRRDRIN+++++L+
Sbjct: 264 LDTTEDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQ 323
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL+MM G+ P M P HQ
Sbjct: 324 ELIPHCNKTDKASMLDEAIEYLKSLQLQLQMMWM--GSGMAPPVMFPGVHQ 372
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 17/129 (13%)
Query: 48 DVDDFSDATEISEGMER-KPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPN 103
D D S+ E E E KP R +RT +AEVHN SERRRRDRIN+++++L+EL+P+
Sbjct: 294 DSDSPSEDAECEEASEETKPSRRYGTKRRTRAAEVHNLSERRRRDRINEKMRALQELIPH 353
Query: 104 CNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPIS 163
CNK+D+AS+LD+ + Y+K+L+ Q+++M G +P M P HQ +PQ++
Sbjct: 354 CNKTDKASILDETIEYLKSLQMQVQIMWMTSG---MAPMMFPGVHQF--IPQMA------ 402
Query: 164 PKLGMGSGI 172
LGM G
Sbjct: 403 --LGMNPGC 409
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 78/123 (63%), Gaps = 8/123 (6%)
Query: 32 SQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRP-------KRTHSAEVHNQSER 84
S+ P+ + HS D+D S+ E G RK + P KR+ SAEVHN SER
Sbjct: 295 SESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRK-EAGPSRTGLGSKRSRSAEVHNLSER 353
Query: 85 RRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMS 144
RRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K+L+ Q+++MS G M
Sbjct: 354 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMF 413
Query: 145 PSG 147
P G
Sbjct: 414 PPG 416
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 74/100 (74%), Gaps = 4/100 (4%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D +ATE ++ R+ ++ +RT +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+
Sbjct: 297 DAECEATEETKSSSRRYGSK-RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDK 355
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ
Sbjct: 356 ASILDEAIEYLKSLQMQVQIMWMTTG---MAPMMFPGAHQ 392
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 74/100 (74%), Gaps = 4/100 (4%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D +ATE ++ R+ ++ +RT +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+
Sbjct: 197 DAECEATEETKSSSRRYGSK-RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDK 255
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ
Sbjct: 256 ASILDEAIEYLKSLQMQVQIMWMTTG---MAPMMFPGAHQ 292
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 46 DTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
+TD D+ + + + + KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CN
Sbjct: 277 ETDDSDYLCYSTLKGSKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN 336
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
K+D+AS+LD+A+ Y+K L+ Q++MMS G + P M P Q
Sbjct: 337 KADKASMLDEAIEYLKTLQLQVQMMSMGCGMV---PMMFPGAQQ 377
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MM
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 218
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQIS 157
A G + P + P Q ++P I+
Sbjct: 219 -AMGSGLCIPPMLLPRAMQ-LQIPSIA 243
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D +ATE ++ R R R+ +AEVHNQSERRRRDRIN++++SL+EL+P+CNK+D+
Sbjct: 175 DVECEATEETKSSRRHGSKR--RSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADK 232
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ
Sbjct: 233 ASILDEAIEYLKSLQMQVQVMWMTSG---MAPMMFPGSHQ 269
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CNK+D+AS+LD+A+ Y+K L+ Q++MM
Sbjct: 298 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMM 357
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S G + P M P Q
Sbjct: 358 SMGCGMV---PMMFPGAQQ 373
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 74/100 (74%), Gaps = 4/100 (4%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D +ATE ++ R+ ++ +RT +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+
Sbjct: 313 DAECEATEETKSSSRRYGSK-RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDK 371
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ
Sbjct: 372 ASILDEAIEYLKSLQMQVQIMWMTTG---MAPMMFPGAHQ 408
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 74/100 (74%), Gaps = 4/100 (4%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D +ATE ++ R+ ++ +RT +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+
Sbjct: 208 DAECEATEETKSSSRRYGSK-RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDK 266
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ
Sbjct: 267 ASILDEAIEYLKSLQMQVQIMWMTTG---MAPMMFPGAHQ 303
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D +ATE ++ R R R+ +AEVHNQSERRRRDRIN++++SL+EL+P+CNK+D+
Sbjct: 184 DVECEATEETKSSRRHGSKR--RSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADK 241
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K+L+ Q+++M G +P M P HQ
Sbjct: 242 ASILDEAIEYLKSLQMQVQVMWMTSG---MAPMMFPGSHQ 278
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 84/127 (66%), Gaps = 8/127 (6%)
Query: 50 DDFSDATEISEGMERKPDNR----PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
+DF D S G++R R K+ S EVHN SERRRRDRIN+R+++L+EL+PNCN
Sbjct: 404 EDFEDE---SIGVKRTDHGRGVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCN 460
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
K+D+AS+LD+A+ Y+K+L+ QL++MS GG ++ P P+G Q + P P+S
Sbjct: 461 KADKASMLDEAIEYLKSLQLQLQIMSMGGGGLYM-PMTLPAGMQHMHAAHMFPFSPMSVA 519
Query: 166 LGMGSGI 172
+ MG G+
Sbjct: 520 MQMGLGV 526
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 59/67 (88%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+H+AEVHN SERRRRDRIN+++K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 273 KRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 332
Query: 131 SAQGGAI 137
S G +
Sbjct: 333 SMGCGMV 339
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MM
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 408
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQIS 157
A G + P + P Q ++P I+
Sbjct: 409 -AMGSGLCIPPMLLPRAMQ-LQIPSIA 433
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
DA E S G ++ + N KR +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 297 DAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 356
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG 147
AS+LD+A+ Y+K L+ Q+++MS G I+ M P G
Sbjct: 357 ASMLDEAIEYLKTLQLQVQIMS-MGAGIYMPSMMLPPG 393
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D E S G+ + K KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 438 DVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 497
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K L+ Q+++MS G + P M P+G Q
Sbjct: 498 ASMLDEAIEYLKTLQLQVQIMS-MGTGLCMPPMMLPTGMQ 536
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D E S G+ + K KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 302 DVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 361
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K L+ Q+++MS G + P M P+G Q
Sbjct: 362 ASMLDEAIEYLKTLQLQVQIMS-MGTGLCMPPMMLPTGMQ 400
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D E S G+ + K KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 423 DVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 482
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
AS+LD+A+ Y+K L+ Q+++MS G + P M P+G Q
Sbjct: 483 ASMLDEAIEYLKTLQLQVQIMS-MGTGLCMPPMMLPTGMQ 521
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 80/114 (70%), Gaps = 10/114 (8%)
Query: 45 LDTDVDDFSDA-TEISEG-----MERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLK 95
LD+ +D+S++ +E +E +ERKP + +R+ +AEVHN SERRRRDRIN+++K
Sbjct: 228 LDSRTEDYSESPSEDAESESLALIERKPPLKLPTARRSRAAEVHNLSERRRRDRINEKMK 287
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
+L+EL+P+CNK+D+AS+LD+A+ Y+K L+ Q++MM G + M P HQ
Sbjct: 288 ALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQMM-WMGSGMAPPAVMFPGMHQ 340
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
DA E S G ++ + N KR +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 297 DAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 356
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG 147
AS+LD+A+ Y+K L+ Q+++MS G ++ M P G
Sbjct: 357 ASMLDEAIEYLKTLQLQVQIMS-MGAGMYMPSMMLPPG 393
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
DA E S G ++ + N KR +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 297 DAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 356
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG 147
AS+LD+A+ Y+K L+ Q+++MS G ++ M P G
Sbjct: 357 ASMLDEAIEYLKTLQLQVQIMS-MGAGMYMPSMMLPPG 393
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
DA E S G ++ + N KR +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 297 DAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 356
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG 147
AS+LD+A+ Y+K L+ Q+++MS G ++ M P G
Sbjct: 357 ASMLDEAIEYLKTLQLQVQIMS-MGAGMYMPSMMLPPG 393
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 54 DATEISEGMER----KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
DA E S G ++ + N KR +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+
Sbjct: 297 DAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 356
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG 147
AS+LD+A+ Y+K L+ Q+++MS G ++ M P G
Sbjct: 357 ASMLDEAIEYLKTLQLQVQIMS-MGAGMYMPSMMLPPG 393
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 8/123 (6%)
Query: 32 SQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRP-------KRTHSAEVHNQSER 84
S+ P+ + HS D+D S+ E G RK + P KR+ AEVHN SER
Sbjct: 295 SESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRK-EAGPSRTGLGSKRSRLAEVHNLSER 353
Query: 85 RRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMS 144
RRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K+L+ Q+++MS G M
Sbjct: 354 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMF 413
Query: 145 PSG 147
P G
Sbjct: 414 PPG 416
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q+++M
Sbjct: 462 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 521
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQIS 157
S G ++ M P G V +S
Sbjct: 522 S-MGAGLYMPSMMLPPGVPHMHVAHMS 547
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 63/79 (79%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CNKSD+AS+LD+A++Y+K+L+ Q++MM
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMM 364
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S G + P M P Q
Sbjct: 365 SMGCGMV---PVMFPGIQQ 380
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 32 SQLPTSWH---QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRD 88
SQL S H S S D D+DD AT R KR+ +AEVHN SERRRRD
Sbjct: 222 SQLKRSCHLAADCSVSPDEDMDDEPGATR------RSAARSAKRSRTAEVHNMSERRRRD 275
Query: 89 RINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
RIN+++++L+EL+PNCNK D+AS+L++A+ Y+K L+ Q++MMS G
Sbjct: 276 RINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGLCM 325
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CNK+D+AS+LD+A+ Y+K L+ Q++MM
Sbjct: 313 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMM 372
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVP 154
S G + P M P Q P
Sbjct: 373 SMGCGMM---PMMFPGVQQYLPPP 393
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
N KR +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q+
Sbjct: 451 NGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQV 510
Query: 128 EMMSAQGGAIFQSPFMSPSG 147
++MS G ++ M P G
Sbjct: 511 QIMS-MGAGLYMPSMMLPPG 529
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 16/114 (14%)
Query: 62 MERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
+ RKP + +R+ +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+AS+LD+A+
Sbjct: 318 LARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIE 377
Query: 119 YVKALRHQLEMMSAQGGAIFQSP-FMSPSGHQSTEVPQISPNVPISPKLGMGSG 171
Y+K+L+ Q++MM I P M P HQ P++G+G G
Sbjct: 378 YLKSLQLQVQMMWMGSAGIAAPPAVMFPGVHQYL------------PRMGVGMG 419
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 17/138 (12%)
Query: 6 SVASGDSEKGQSS-RNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMER 64
SV SG+ ++ Q + R+ ++ E SASQ + D+DD E++ R
Sbjct: 282 SVCSGNGDRRQLNWRDSHNNQSAEWSASQD-----------ELDLDD-----ELAGVHRR 325
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+L++A+ Y+K L+
Sbjct: 326 SAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQ 385
Query: 125 HQLEMMSAQGGAIFQSPF 142
Q++MMS G PF
Sbjct: 386 LQVQMMSMGTGMFVPPPF 403
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 319
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S G + P M P Q
Sbjct: 320 SMGYGMV---PMMFPGIQQ 335
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 364
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S + P M P Q
Sbjct: 365 SMGCSMV---PMMYPGVQQ 380
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 267 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 326
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S + P M P Q
Sbjct: 327 SMGCSMV---PMMYPGVQQ 342
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 16/114 (14%)
Query: 62 MERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
+ RKP + +R+ +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+AS+LD+A+
Sbjct: 318 LARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIE 377
Query: 119 YVKALRHQLEMMSAQGGAIFQSP-FMSPSGHQSTEVPQISPNVPISPKLGMGSG 171
Y+K+L+ Q++MM I P M P HQ P++G+G G
Sbjct: 378 YLKSLQLQVQMMWMGSAGIAAPPAVMFPGVHQYL------------PRMGVGMG 419
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Query: 46 DTDVDDFSDATEISEGME-----RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKEL 100
+ D+ DFS +E + E P N KR+ SAEVHN SE+RRR RIN+++K+L+ L
Sbjct: 163 ENDLGDFSCDSEGGDLPEVPSSTNLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNL 222
Query: 101 VPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQI 156
+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G Q P P Q ++PQ+
Sbjct: 223 IPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLQ-PMCLPGMLQPIQLPQM 277
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 57/65 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AEVHN SERRRRDRIN+++K+L+EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL+MM
Sbjct: 266 KRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 325
Query: 131 SAQGG 135
GG
Sbjct: 326 WMGGG 330
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 57/65 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AEVHN SERRRRDRIN+++K+L+EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL+MM
Sbjct: 266 KRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 325
Query: 131 SAQGG 135
GG
Sbjct: 326 WMGGG 330
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 57/65 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AEVHN SERRRRDRIN+++K+L+EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL+MM
Sbjct: 275 KRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQMM 334
Query: 131 SAQGG 135
GG
Sbjct: 335 WMGGG 339
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 75/111 (67%), Gaps = 16/111 (14%)
Query: 65 KPDNR--PKR-THSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
KP R PKR T +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+AS+LD+ + Y+K
Sbjct: 218 KPSRRHGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLK 277
Query: 122 ALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGI 172
+L+ Q+++M G +P M P HQ +P ++ LGM SG
Sbjct: 278 SLQMQVQIMWMTSG---MAPMMFPGAHQF--MPPMA--------LGMNSGC 315
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 56/61 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SER+RRDRIN+R+K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
Query: 131 S 131
S
Sbjct: 270 S 270
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 56/61 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SER+RRDRIN+R+K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 269
Query: 131 S 131
S
Sbjct: 270 S 270
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
Query: 46 DTDVDDFSDATEISEGME-----RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKEL 100
+ D+ DFS +E + E P N KR+ SAEVHN SE+RRR RIN+++K+L+ L
Sbjct: 163 ENDLGDFSCDSEGGDLPEVPSSTNLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNL 222
Query: 101 VPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQI 156
+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G Q P P Q ++PQ+
Sbjct: 223 IPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLQ-PMCLPGMLQPIQLPQM 277
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 76/117 (64%), Gaps = 8/117 (6%)
Query: 46 DTDVDDFS------DATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKE 99
+ D+ DFS D E+ + P N KR+ SAEVHN SE+RRR RIN+++K+L+
Sbjct: 163 ENDLGDFSCDSEGGDLPEVPSSTDL-PRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQN 221
Query: 100 LVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQI 156
L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G Q P P Q ++PQ+
Sbjct: 222 LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLQ-PMCLPGVLQPIQLPQM 277
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Query: 46 DTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
D D+DD + S R KR +AEVHN SERRRRDRIN+++++L+EL+PNCN
Sbjct: 245 DEDLDDEAGGLRRSAAGARST----KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCN 300
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
K D+AS+L++A+ Y+K L+ Q++MMS+ G A
Sbjct: 301 KIDKASMLEEAIEYLKTLQLQVQMMSSMGPA 331
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Query: 56 TEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASV 112
+E + + RKP + +R+ +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+AS+
Sbjct: 307 SESAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASM 366
Query: 113 LDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
LD+A+ Y+K+L+ Q++MM G M P HQ
Sbjct: 367 LDEAIEYLKSLQLQVQMMWMGSGIAAPPAVMFPGVHQ 403
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 70/89 (78%), Gaps = 5/89 (5%)
Query: 50 DDFSDATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK 106
+D +DA ++ G+E +P R KR +A+VHN SERRRRDRIN+++K+L+EL+P+CNK
Sbjct: 226 NDATDAEDV--GLECEPAQRTTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNK 283
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQGG 135
+D+AS+LD+A+ Y+K+L+ QL+++ GG
Sbjct: 284 ADKASMLDEAIEYLKSLQLQLQVVWMGGG 312
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 9/107 (8%)
Query: 32 SQLPTSWH---QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRD 88
SQL S H S S D D+DD AT R KR +AEVHN SERRRRD
Sbjct: 283 SQLKRSRHLAADCSVSPDEDLDDEPGATR------RSAARSAKRCRTAEVHNLSERRRRD 336
Query: 89 RINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
RIN+++++L+EL+PNCNK D++S+L++A+ Y+K L+ Q++MMS G
Sbjct: 337 RINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQMMSMGTG 383
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 56/61 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SER+RRDRIN+R+K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
Query: 131 S 131
S
Sbjct: 341 S 341
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 56/61 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SER+RRDRIN+R+K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
Query: 131 S 131
S
Sbjct: 341 S 341
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 17/126 (13%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D+ DA RKP KR S EVH ER+RRD NK++++L++++PNC K D+
Sbjct: 204 DESDDAKTQVHARIRKPVT--KRKRSTEVHKLYERKRRDEFNKKMRALQDILPNCYKDDK 261
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMG 169
AS+LD+AV Y++ L+HQ++MMS G + + P M P GH P +G+G
Sbjct: 262 ASLLDEAVKYMRTLQHQVQMMSM-GNGLIRPPMMLPMGH--------------YPPMGLG 306
Query: 170 SGIGTG 175
+G
Sbjct: 307 MHVGAA 312
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 416
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S + P M P Q
Sbjct: 417 SMGCSMV---PMMFPGIQQ 432
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 62/79 (78%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P NKSD+AS+LD+A++Y+K+L+ Q++MM
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQMM 314
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S G + P M P Q
Sbjct: 315 SMGCGMV---PMMFPGIQQ 330
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 55/61 (90%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MM
Sbjct: 452 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 511
Query: 131 S 131
S
Sbjct: 512 S 512
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++++L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q++MM
Sbjct: 364 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMM 423
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
S + P M P Q
Sbjct: 424 SMGCSMV---PMMFPGFQQ 439
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 69/96 (71%), Gaps = 6/96 (6%)
Query: 53 SDATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
S+ E+ + KP R +R+ +AEVHN SERRRRDRIN+++++L+EL+P+CNK+D+
Sbjct: 10 SEDAELDSAVANKPAKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDK 69
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSP 145
AS+LD+A+ Y+K+L+ QL++M G + P M P
Sbjct: 70 ASMLDEAIEYLKSLQLQLQVMWMGSGIV---PVMFP 102
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 10/106 (9%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
NR +R + VHN SE++RR++INK++++LKEL+PNCNK D+AS+LDDA++Y+K L+ QL
Sbjct: 320 NRVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQL 379
Query: 128 EMMSAQGG--AIFQSPFMSPSGHQSTEVPQIS-----PNVPISPKL 166
++MS G + P + + H + PQ+ P +PI P L
Sbjct: 380 QIMSMGNGLWPLMMLPAATTAHHMN---PQLGMGFRPPQLPIPPSL 422
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR SAE H+ SE+RRRDRINK+++SL+EL+PNC K D+ S+LD+A++Y+K L+ Q+++M
Sbjct: 11 KRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVM 70
Query: 131 SAQGGAIFQSPFMSPS---GHQSTEVPQISP 158
S G + +P M P+ Q+ +P SP
Sbjct: 71 S-MGAGMCMAPVMIPAVLQQIQAAHLPHFSP 100
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A+VHN ER+RRD+INKR++ LKEL+PNCNK+D+AS+LDDA+ Y+K L+ Q++ +
Sbjct: 748 KRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQ-V 806
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQI 156
+ + + +Q F+ P QS P +
Sbjct: 807 NFKSFSSYQIAFVRPCVRQSYIKPSV 832
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 67/93 (72%), Gaps = 6/93 (6%)
Query: 46 DTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
+ D+DD E++ R KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCN
Sbjct: 312 ELDLDD-----ELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCN 366
Query: 106 KSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
K D+AS+L++A+ Y+K L+ Q++MMS G +F
Sbjct: 367 KIDKASMLEEAIEYLKTLQLQVQMMS-MGTGMF 398
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 56/61 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SER+RRDRIN+R+K+L+EL+P CNKSD+AS+LD+A+ Y+K+L+ Q+++M
Sbjct: 290 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQVM 349
Query: 131 S 131
S
Sbjct: 350 S 350
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 58/66 (87%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+KP RPKR+ +AEVHN SERRRRDRIN+++++L+EL+PN NK+D+AS+LD+A+ Y+K L
Sbjct: 7 KKPATRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKML 66
Query: 124 RHQLEM 129
+ QL++
Sbjct: 67 QLQLQV 72
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR SAE H+ SE+RRRDRINK+++SL+EL+PNC K D+ S+LD+A++Y+K L+ Q+++M
Sbjct: 380 KRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVM 439
Query: 131 SAQGGAIFQSPFMSPS---GHQSTEVPQISP 158
S G + +P M P+ Q+ +P SP
Sbjct: 440 S-MGAGMCMAPVMIPAVLQQIQAAHLPHFSP 469
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 8/109 (7%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+RT +A VHNQSERRRRDRIN+++K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++ M
Sbjct: 244 RRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAM 303
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDV 179
S + M P G Q Q+ ++ +G+ G+G GM+D+
Sbjct: 304 SVRN----MPQMMMPLGMQQ----QLQMSLLARMGMGVSLGMGMGMLDM 344
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 84/134 (62%), Gaps = 15/134 (11%)
Query: 50 DDFSDATEISEGMERKPDNR----PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
+DF D S G++R R K+ S EVHN SERRRRDRIN+R+++L+EL+PNCN
Sbjct: 404 EDFEDE---SIGVKRTDHGRGVTGSKKNRSTEVHNLSERRRRDRINERMRALQELIPNCN 460
Query: 106 K-------SDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
K +D+AS+LD+A+ Y+K+L+ QL++MS GG ++ P P+G Q + P
Sbjct: 461 KVDLFFLQADKASMLDEAIEYLKSLQLQLQIMSMGGGGLYM-PMTLPAGMQHMHAAHMFP 519
Query: 159 NVPISPKLGMGSGI 172
P+S + MG G+
Sbjct: 520 FSPMSVAMQMGLGV 533
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 2/129 (1%)
Query: 26 FLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERR 85
F + SA + S L D + ++ E+ R P N KR+ +AEVHN SE+R
Sbjct: 78 FAKESAERRGVSMENDLGDLSCDSEKGAEVAEVPSETVR-PRNSSKRSRAAEVHNLSEKR 136
Query: 86 RRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSP 145
RR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M++ + G P P
Sbjct: 137 RRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLH-PMCLP 195
Query: 146 SGHQSTEVP 154
Q ++P
Sbjct: 196 GVLQPMQLP 204
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 36 TSWHQTSHSLDTDVDDFSDATEISEGMERK---PDNRPKRTHSAEVHNQSERRRRDRINK 92
S ++T H D + ++ +A + E ++ K P + KR+ +AEVHN SE+RRR RIN+
Sbjct: 122 ASENETDHECDCESEEGLEA--LIEEVQTKAAPPRSSSKRSRAAEVHNLSEKRRRSRINE 179
Query: 93 RLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTE 152
++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G I P P Q T+
Sbjct: 180 KMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNG-IGLHPMCLPGVLQPTQ 238
Query: 153 VPQIS 157
Q S
Sbjct: 239 FSQFS 243
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 85/134 (63%), Gaps = 18/134 (13%)
Query: 6 SVASGDSEKGQSS-RNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMER 64
SV SG+ ++ Q + R+ ++ E SASQ + D+DD E++ R
Sbjct: 161 SVCSGNGDRRQLNWRDSHNNQSAEWSASQD-----------ELDLDD-----ELAGVHRR 204
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+L++A+ Y+K L+
Sbjct: 205 SAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQ 264
Query: 125 HQLEMMSAQGGAIF 138
Q++MMS G +F
Sbjct: 265 LQVQMMS-MGTGMF 277
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 44 SLDTDVDDFSDATEISEGMERKPDN------RPKRTHSAEVHNQSERRRRDRINKRLKSL 97
S++ VDDF +E P N KR+ +AEVHN SE+RRR RIN+++K+L
Sbjct: 151 SMENSVDDFGCDSEKGPEASDVPSNPAPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL 210
Query: 98 KELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M++ + G P P Q T++PQ
Sbjct: 211 QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLH-PIYLPGALQPTQLPQTG 269
Query: 158 PNVPISPKLGMGSGIGT 174
L SG GT
Sbjct: 270 AGFAEGNLLLSNSGTGT 286
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 59/65 (90%), Gaps = 1/65 (1%)
Query: 68 NRPKRTH-SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
NR KR++ +A+VHN SER+RRD+IN+++++LKEL+PNCNK D+AS+LDDA++Y+K L+ Q
Sbjct: 201 NRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQ 260
Query: 127 LEMMS 131
L++MS
Sbjct: 261 LQIMS 265
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 59/65 (90%), Gaps = 1/65 (1%)
Query: 68 NRPKRTH-SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
NR KR++ +A+VHN SER+RRD+IN+++++LKEL+PNCNK D+AS+LDDA++Y+K L+ Q
Sbjct: 201 NRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQ 260
Query: 127 LEMMS 131
L++MS
Sbjct: 261 LQIMS 265
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 20/186 (10%)
Query: 5 FSVASGDSEK---GQSSRNENSFDFLESS-------ASQLPTSWHQTSHSLDTDVDDFS- 53
F SG +EK G+ R + S D L ++ AS PTS + + DT+ +S
Sbjct: 297 FGSTSGSAEKKIKGKPDRGK-SIDQLTATSSICSRGASNDPTSSLERQYE-DTEGTAYSS 354
Query: 54 DATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVL 113
D E E + + KR + E+HN SER+RRDRINK++++L++L+PN NK D+AS+L
Sbjct: 355 DDLEEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASML 414
Query: 114 DDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIG 173
+A++Y+K+L+ Q++MMS G + M P+G Q P ++ P MG G+
Sbjct: 415 GEAIDYLKSLQLQVQMMS-MGTRLCMPLMMLPTGMQHIHAPLLAQFSP------MGVGMD 467
Query: 174 TGMVDV 179
T ++ +
Sbjct: 468 TRLMQM 473
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 78/110 (70%), Gaps = 9/110 (8%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A +HNQSER+RRD+IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++MM
Sbjct: 280 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 339
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMG-SGIGTGMVDV 179
S + P M P Q + Q+S P++ +GMG +GIG ++D+
Sbjct: 340 S----RMNIQPVMLPMTMQ--QQLQMSMLAPMN--MGMGLAGIGMNVMDM 381
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 20/186 (10%)
Query: 5 FSVASGDSEK---GQSSRNENSFDFLESS-------ASQLPTSWHQTSHSLDTDVDDFS- 53
F SG +EK G+ R + S D L ++ AS PTS + + DT+ +S
Sbjct: 303 FGSTSGSAEKKIKGKPDRGK-SIDQLTATSSICSRGASNDPTSSLERQYE-DTEGTAYSS 360
Query: 54 DATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVL 113
D E E + + KR + E+HN SER+RRDRINK++++L++L+PN NK D+AS+L
Sbjct: 361 DDLEEEEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASML 420
Query: 114 DDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIG 173
+A++Y+K+L+ Q++MMS G + M P+G Q P ++ P MG G+
Sbjct: 421 GEAIDYLKSLQLQVQMMS-MGTRLCMPLMMLPTGMQHIHAPLLAQFSP------MGVGMD 473
Query: 174 TGMVDV 179
T ++ +
Sbjct: 474 TRLMQM 479
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 85/134 (63%), Gaps = 18/134 (13%)
Query: 6 SVASGDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERK 65
SV SG+ ++ Q ++ +S +Q W + LD D D+ + G+ R+
Sbjct: 66 SVCSGNGDRRQ-------LNWRDSHNNQ-SAEWSASQDELDLD-DELA-------GVHRR 109
Query: 66 PDNRP-KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
R KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+L++A+ Y+K L+
Sbjct: 110 SAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQ 169
Query: 125 HQLEMMSAQGGAIF 138
Q++MMS G +F
Sbjct: 170 LQVQMMS-MGTGMF 182
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R +AEVHNQSERRRRDRIN+++++L++L+PN NK+D+AS+L++A+ Y+K+L+ QL++M
Sbjct: 357 RRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416
Query: 131 SAQGGAIFQSPFMSP 145
GG +P M P
Sbjct: 417 WMGGGM---TPVMFP 428
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D+ DA RKP KR S EVH ER+RRD NK++++L++L+PNC K D+
Sbjct: 207 DESDDAKTQVHARTRKPVT--KRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDK 264
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQS 150
AS+LD+A+ Y++ L+ Q++MMS G + + P M P GH S
Sbjct: 265 ASLLDEAIKYMRTLQLQVQMMS-MGNGLIRPPTMLPMGHYS 304
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 67/98 (68%), Gaps = 4/98 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
K+ +VH+ SER+RRD+INK++++L+ L+PN +K D+AS+LD A+ Y+K L+ QL+MM
Sbjct: 377 KKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQLQLQMM 436
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGM 168
S + G+ + P M P+ Q + P +S SP +GM
Sbjct: 437 SMR-GSCYMPPMMIPTALQQIQAPYLS---HFSPMMGM 470
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 59/74 (79%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SE+RRR +IN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 161
Query: 131 SAQGGAIFQSPFMS 144
S + G P++S
Sbjct: 162 SMRNGVYLNPPYLS 175
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 74/104 (71%), Gaps = 10/104 (9%)
Query: 40 QTSHSLDTDVDDF-SDATEISEGMERKPDNRP-------KRTHSAEVHNQSERRRRDRIN 91
Q ++DT+ ++ S+A E+ ++ N P +R+ +AEVHN SERRRRDRIN
Sbjct: 146 QKRKTIDTEDSEYQSEAAELD--LDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRIN 203
Query: 92 KRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
+++++L+EL+P+C K+D+AS+LD+A+ Y+K+L+ QL++M GG
Sbjct: 204 EKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWMGGG 247
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 155 KRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 214
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQI 156
S + G P P Q +V Q+
Sbjct: 215 SMRNGMSLH-PMCLPGALQPVQVSQM 239
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ SAE HN SERRRRDRIN++LK+L+EL+PNC K+D+ S+LD+A++Y+K+L+ QL+M+
Sbjct: 16 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 75
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
G +P + P Q
Sbjct: 76 VMGKGM---APVVPPELQQ 91
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 56/65 (86%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ SAE HN SERRRRD+IN++LK+L+EL+PNCNK+D+ S+LD+A++Y+K+L+ QL+M+
Sbjct: 15 RRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQML 74
Query: 131 SAQGG 135
G
Sbjct: 75 VMGKG 79
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 56/65 (86%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ SAE HN SERRRRD+IN++LK+L+EL+PNCNK+D+ S+LD+A++Y+K+L+ QL+M+
Sbjct: 15 RRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQML 74
Query: 131 SAQGG 135
G
Sbjct: 75 VMGKG 79
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 10/143 (6%)
Query: 15 GQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTH 74
G+ S+ E D + H S LD + + + SE R R KR+
Sbjct: 4 GRGSQEEEHLDLI---------MRHHASMGLDRCESEEALGSSESEQPTRPARPRGKRSR 54
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
+AEVHN SE+RRR RIN+++K+L+ L+PN +K+D+AS+LDDA+ Y+K L+ Q++M+S +
Sbjct: 55 AAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN 114
Query: 135 GAIFQSPFMSPSGHQSTEVPQIS 157
G ++ P + +PQ+S
Sbjct: 115 G-LYLPPVNLSGAPEHLPIPQMS 136
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 10/143 (6%)
Query: 15 GQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTH 74
G+ S+ E D + H S LD + + + SE R R KR+
Sbjct: 4 GRGSQEEEHLDLI---------MRHHASMGLDRCESEEALGSSESEQPTRPARPRGKRSR 54
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
+AEVHN SE+RRR RIN+++K+L+ L+PN +K+D+AS+LDDA+ Y+K L+ Q++M+S +
Sbjct: 55 AAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRN 114
Query: 135 GAIFQSPFMSPSGHQSTEVPQIS 157
G ++ P + +PQ+S
Sbjct: 115 G-LYVPPVNLSGAPEHLPIPQMS 136
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 58/74 (78%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KRT +AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 103 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 162
Query: 131 SAQGGAIFQSPFMS 144
S + G ++S
Sbjct: 163 SMRNGVYLNPSYLS 176
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 60/75 (80%), Gaps = 3/75 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AEVHNQSERRRRDRIN+++++L++L+PN NK+D+AS+L++A+ Y+K+L+ QL++M
Sbjct: 357 KRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVM 416
Query: 131 SAQGGAIFQSPFMSP 145
G +P M P
Sbjct: 417 WMGSGM---TPVMFP 428
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 55/60 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SER+RRDRIN+R+K+L+EL+PN NK+D+AS+LD+A+ Y+K L+HQL+++
Sbjct: 5 KRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 53/58 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR +AEVHN SERRRRDRIN+++K+L+EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL+
Sbjct: 311 KRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 368
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKEL--VPNCNKSDRASVLDDAVNYVKALRHQLE 128
+R+ +AEVHN SERRRRDRIN+++++L+EL +P+CNK+D+AS+LD+A+ Y+K+L+ QL
Sbjct: 163 RRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQLR 222
Query: 129 MMSAQGGAIFQSPFMSPSGHQ 149
+M G+ P M P HQ
Sbjct: 223 VMWM--GSGMAPPLMFPGVHQ 241
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 58/74 (78%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KRT +AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 218
Query: 131 SAQGGAIFQSPFMS 144
S + G ++S
Sbjct: 219 SMRNGVYLNPSYLS 232
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 55/61 (90%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+PN NK+D+AS+LD+A+ Y+K L+ QL+++
Sbjct: 17 KRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVL 76
Query: 131 S 131
S
Sbjct: 77 S 77
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 55/61 (90%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SERRRRDRIN+++K+L+EL+PN NK+D+AS+LD+A+ Y+K L+ QL+++
Sbjct: 17 KRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVL 76
Query: 131 S 131
S
Sbjct: 77 S 77
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 76 AEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM-SAQG 134
AE HN SERRRRDRIN++LK+L+EL+PNC K+D+ S+LD+A++Y+K+L+ QL+M+ +G
Sbjct: 15 AEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKG 74
Query: 135 GAIFQSPFMSPSGHQSTEVP-QISPNVPISPK 165
A P + H T P QI P P P+
Sbjct: 75 MAPVVPPELQQYMHYITADPSQIPPIRPSEPR 106
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 57/65 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SE+RRR+RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 153 KRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQML 212
Query: 131 SAQGG 135
SA+ G
Sbjct: 213 SARSG 217
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
SE R R KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN +K+D+AS+LDDA+
Sbjct: 17 SEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIE 76
Query: 119 YVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQIS 157
Y+K L+ Q++M+S + G ++ P + +PQ+S
Sbjct: 77 YLKQLQLQVQMLSMRNG-LYLPPVNLSGAPEHLPIPQMS 114
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 9/85 (10%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ---- 126
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P NKSD+AS+LD+A++Y+K+L+ Q
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRV 314
Query: 127 --LEMMSAQGGAIFQSPFMSPSGHQ 149
++MMS G + P M P Q
Sbjct: 315 QLMQMMSMGCGMV---PMMFPGIQQ 336
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 54/61 (88%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
NR KR+ + EVHN SE++RR++INK++++LK+L+PNCNK D+AS+LDDA++Y+K L+ QL
Sbjct: 330 NRVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQL 389
Query: 128 E 128
+
Sbjct: 390 Q 390
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Query: 29 SSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRP--KRTHSAEVHNQSERRR 86
+S++ + S H + D + ++ +A + E + KP+ R KR+ +AEVHN SE+RR
Sbjct: 129 ASSTSVGASDHNENDEFDCESEEGLEA--LVEELPTKPNPRSSSKRSRAAEVHNLSEKRR 186
Query: 87 RDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
R RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G
Sbjct: 187 RSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNG 235
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
Query: 29 SSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRP--KRTHSAEVHNQSERRR 86
+S++ + S H + D + ++ +A + E + KP+ R KR+ +AEVHN SE+RR
Sbjct: 129 ASSTSVGASDHNENDEFDCESEEGLEA--LVEELPTKPNPRSSSKRSRAAEVHNLSEKRR 186
Query: 87 RDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
R RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G
Sbjct: 187 RSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNG 235
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 58/74 (78%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SE+RRR +IN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 23 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 82
Query: 131 SAQGGAIFQSPFMS 144
S + G ++S
Sbjct: 83 SMRNGVYLNPSYLS 96
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AE+HN +ERRRR++IN+ +K+L+EL+P CNKS + S LDDA+ YVK L+ Q++MM
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKWLQSQIQMM 640
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQIS 157
S G + P M +G+ +P ++
Sbjct: 641 STGQGMM---PPMMYAGNTQQFMPHMA 664
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 52/61 (85%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AE+HN +ERRRR++IN+++K+L+EL+P CNKS + S L+D + Y+K+L+ Q++MM
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDVIEYMKSLQMQIQMM 1198
Query: 131 S 131
S
Sbjct: 1199 S 1199
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 50/60 (83%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AE+HN +ERRRR++IN+++K+L+EL+P CNKS + S LD A+ YVK L+ Q++M+
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLDAAIEYVKWLQSQIQMI 194
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 10/133 (7%)
Query: 4 NFSVAS-GDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGM 62
FSV S G EK + + + +S+S + T + + +TD+ D + E E +
Sbjct: 1496 TFSVPSRGGKEKAVAI--QTVCEIAGTSSSGVETEPVRIQPATETDIADGRERKEREETI 1553
Query: 63 -------ERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDD 115
E + KR+ +AE+HN +ERRRR++IN+++K+L+EL+P CNKS + S L+D
Sbjct: 1554 AGIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLED 1613
Query: 116 AVNYVKALRHQLE 128
+ YVK+L Q++
Sbjct: 1614 VIEYVKSLEMQIQ 1626
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D+ DA RKP KR S EVH ER+RRD NK++++L++L+PNC K D+
Sbjct: 207 DESDDAKTQVHARTRKPVT--KRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDK 264
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQS 150
AS+LD+A+ Y++ L+ Q++MMS G + + P M P G S
Sbjct: 265 ASLLDEAIKYMRTLQLQVQMMS-MGNGLIRPPTMLPMGKYS 304
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 55/61 (90%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHNQSERRRRDRIN+++++L+EL+PN NK+D+AS+LD+A+ Y+K L+ QL++
Sbjct: 20 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQVC 79
Query: 131 S 131
+
Sbjct: 80 A 80
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 87/146 (59%), Gaps = 23/146 (15%)
Query: 45 LDTDVDDFSDATEISEGMERKPD----------NRPKRTHSAEVHNQSERRRRDRINKRL 94
D D+D++ +E EG+E + + KR+ +AEVHN SE+RRR RIN+++
Sbjct: 102 FDNDLDEYDCESE--EGLEALVEEVATKAAPLRSSSKRSRAAEVHNLSEKRRRSRINEKM 159
Query: 95 KSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVP 154
K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G P +P
Sbjct: 160 KALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLH-PMC---------LP 209
Query: 155 QISPNVPISP-KLGMGSGIGTGMVDV 179
+ P V +S ++G+G G+ +D+
Sbjct: 210 GVLPPVQLSQMRIGIGEENGSLHMDM 235
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ SA+ HN SERRRRDRIN++L++L+EL+PNC K+D+ S+LD+A++Y+K+L+ QL+M+
Sbjct: 16 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 75
Query: 131 -SAQGGAIFQSPFMSPSGHQ 149
+GG + +P + P Q
Sbjct: 76 VMGKGGGM--APVVPPELQQ 93
>gi|224108413|ref|XP_002314839.1| predicted protein [Populus trichocarpa]
gi|222863879|gb|EEF01010.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 56 TEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDD 115
+ + E +K + RPKRT SAE+HN S R RDRI +L++L+EL+PNC+K DR S+L+D
Sbjct: 5 SRLQEPRRKKHEQRPKRTRSAEMHNVS--RPRDRIKGKLRALQELIPNCHKQDRPSMLED 62
Query: 116 AVNYVKALRHQLEMMSAQGGAIFQS 140
AV Y+KAL+ Q+E+++ A+ Q+
Sbjct: 63 AVEYLKALKLQVEVITLSVIAVLQA 87
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ SA+ HN SERRRRDRIN++LK+L+EL+PNC K+D+ S+LD+A++Y+K+L+ QL+M+
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
Query: 131 SAQGGAIFQSPFMSPSGHQ 149
G +P + P Q
Sbjct: 77 VMGKGM---APVVPPELQQ 92
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ SA+ HN SERRRRDRIN++L++L+EL+PNC K+D+ S+LD+A++Y+K+L+ QL+M+
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 76
Query: 131 -SAQGGAIFQSPFMSPSGHQ 149
+GG + +P + P Q
Sbjct: 77 VMGKGGGM--APVVPPELQQ 94
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Query: 65 KPDNRPKRTH-----------SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVL 113
+P+ P+RT +AEVHN SE+RRR +IN+++K+L+ L+PN NK+D+AS+L
Sbjct: 63 EPEAPPERTRGGGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASML 122
Query: 114 DDAVNYVKALRHQLEMMSAQGGAIFQSPFMS 144
D+A+ Y+K L+ Q++M+S + G P++S
Sbjct: 123 DEAIEYLKQLQLQVQMLSMRNGVYLNPPYLS 153
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 6/127 (4%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
+E M + P R+H E HN +E+RRR +IN+RLK+L++LVP C+KS++AS LD ++
Sbjct: 149 TEEMRKAPAGGSSRSHHGEAHNLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIH 208
Query: 119 YVKALRHQLEMMSAQGGAIFQSPFMSPSG-HQSTEVPQISPNVPI-----SPKLGMGSGI 172
Y+K+L+HQ++ MS + P + P +T V P P+ P M
Sbjct: 209 YMKSLQHQVQAMSVGLASPAVYPVVQPQCVPPATPVAMPFPAAPMFLGGHPPSTTMMVPF 268
Query: 173 GTGMVDV 179
GT M+ +
Sbjct: 269 GTTMIPL 275
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 51 DFSDATEISEGMERKPDNRP--KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSD 108
D D+ E E +P RP KR +AEVHN SE+RRR +IN+++K+L+ LVPN +K+D
Sbjct: 25 DRGDSEEALGSSESEPAGRPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTD 84
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQGG 135
+AS+LDDA+ Y+K L+ Q++M+S + G
Sbjct: 85 KASMLDDAIEYLKHLQLQVQMLSMRNG 111
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 58/74 (78%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SE+RRR +IN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 100 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
Query: 131 SAQGGAIFQSPFMS 144
S + G ++S
Sbjct: 160 SMRNGVYLNPSYLS 173
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 58/74 (78%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SE+RRR +IN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 100 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
Query: 131 SAQGGAIFQSPFMS 144
S + G ++S
Sbjct: 160 SMRNGVYLNPSYLS 173
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 54/59 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM 129
KR+ +AEVHNQSERRRRDRIN+++++L+EL+PN NK+D+AS+L++A+ Y+K L+ QL++
Sbjct: 20 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLEEAIEYLKMLQLQLQV 78
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Query: 39 HQTSHSL-DTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSL 97
HQ+ ++ +++V D ++E +P R KR+ +AEVHN SE+RRR RIN+++K+L
Sbjct: 13 HQSMATVCESEVQDALGSSESDPARPARP--RGKRSRAAEVHNLSEKRRRSRINEKMKAL 70
Query: 98 KELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
+ L+PN +K+D+AS+LDDA+ Y+K L+ Q++M+S + G
Sbjct: 71 QTLIPNSSKTDKASMLDDAIEYLKHLQLQVQMLSMRNGLYL 111
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
N KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q+
Sbjct: 140 NPSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQV 199
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEV 153
+M++ + G P P Q E+
Sbjct: 200 QMLTMRNGVSL-YPVCLPGVLQPNEI 224
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN +K+D+AS+LDDA+ Y+K L+ Q++
Sbjct: 41 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQ 100
Query: 129 MMSAQGGAIF 138
M+S + G
Sbjct: 101 MLSMRNGLYL 110
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 73/109 (66%)
Query: 32 SQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRIN 91
++L S ++T H D + ++ +A ++ P KRT +AEVHN SE+RRR RIN
Sbjct: 96 TRLIMSENETDHECDCESEEGLEALIDEMSVKPAPPRSSKRTRAAEVHNLSEKRRRSRIN 155
Query: 92 KRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQS 140
+++K+L+ L+PN +K+D+AS+LD+A+ Y+K L+ Q++ +S + I++
Sbjct: 156 EKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQGLSVRFLEIYRC 204
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN +K+D+AS+LDDA+ Y+K L+ Q++
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQ 99
Query: 129 MMSAQGGAIF 138
M+S + G
Sbjct: 100 MLSMRNGLYL 109
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN +K+D+AS+LDDA+ Y+K L+ Q++
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQ 99
Query: 129 MMSAQGGAIF 138
M+S + G
Sbjct: 100 MLSMRNGLYL 109
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 69/108 (63%), Gaps = 8/108 (7%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE-M 129
KR+ +AE+HN +ERRRR++IN+++K+L++L+P CNKS + S LDDA+ YVK+L+ Q++ M
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
Query: 130 MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPIS----PKLGMGSGIG 173
MS A FM H + ++ + P +P P +G+G
Sbjct: 312 MSPMMNAGNTQQFMP---HMAMDMNRPPPFIPFPGTSFPMPAQMAGVG 356
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 54/61 (88%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +A +HNQSERRRRDRIN+++K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++MM
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 241
Query: 131 S 131
S
Sbjct: 242 S 242
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 53/61 (86%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A +HNQSER+RRD+IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q+ MM
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
Query: 131 S 131
S
Sbjct: 270 S 270
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 53/61 (86%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A +HNQSER+RRD+IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q+ MM
Sbjct: 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
Query: 131 S 131
S
Sbjct: 270 S 270
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 54/61 (88%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +A +HNQSERRRRDRIN+++K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++MM
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 279
Query: 131 S 131
S
Sbjct: 280 S 280
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 53/60 (88%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A +HNQSER+RRD+IN+R+K+L++LVPN +KSD+AS+LD+ + Y+K L+ QL+M+
Sbjct: 267 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMI 326
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 55/60 (91%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AEVHN SER+RRDRIN+R+K+L+EL+PN NK+D+AS+LD+A+ Y+K L+HQL+++
Sbjct: 5 KRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQVV 64
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 75/116 (64%), Gaps = 8/116 (6%)
Query: 44 SLDTDVDDFSDATEISEGMERKPDNRPKRTHSA-----EVHNQSERRRRDRINKRLKSLK 98
S++ D+ DFS +E +G+E + + R+ S EVHN SE+RRR RIN+++K+L+
Sbjct: 90 SVEDDLGDFSCDSE--KGVEVQANTARPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ 147
Query: 99 ELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVP 154
L+PN NK+D+AS+LD+A+ Y+K L+ Q++M++ + G P P Q ++P
Sbjct: 148 NLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLH-PMCLPGALQPMQLP 202
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Query: 76 AEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
E HN SERRRRDRIN++LK+L+EL+PNC K+D+ S+LD+A++Y+K+L+ QL+M+ G
Sbjct: 19 VEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLVMGKG 78
Query: 136 AIFQSPFMSPSGHQ 149
+P + P Q
Sbjct: 79 T---APVVPPELQQ 89
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 54/71 (76%)
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
+AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M++ +
Sbjct: 177 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 236
Query: 135 GAIFQSPFMSP 145
G P P
Sbjct: 237 GINLHHPLCLP 247
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
+AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S +
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRN 204
Query: 135 GAIFQSPFMSPSGHQSTEV 153
G P P Q +++
Sbjct: 205 GMSLH-PMCLPGASQFSQI 222
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 53/60 (88%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A +HNQSER+RRD+IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++MM
Sbjct: 267 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 326
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 52/59 (88%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM 129
KR +AEVHN SERRRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q+++
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A +H SERRRR +IN+ +K+L+EL+P C K+DR+S+LDD + YVK+L+ Q++M
Sbjct: 274 KRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMF 333
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPN-------VPISPKLGMGSGIG 173
S G + P M Q +P ++ +P + M G+G
Sbjct: 334 SM--GHVMIPPMMYAGNIQQQYMPHMAMGMNRPPAFIPFPRQAHMAEGVG 381
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 77 EVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
EVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G
Sbjct: 147 EVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGL 206
Query: 137 IFQSPFMSPSGHQSTEVPQI 156
P P G Q ++ Q+
Sbjct: 207 SLH-PMCFPDGLQPLQLSQM 225
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Query: 44 SLDTDVDDFSDATEI-SEGMERKPDNR--------PKRTHSAEVHNQSERRRRDRINKRL 94
SL T D A + SE E + D + +R+ +A +HNQSERRRRDRIN+++
Sbjct: 222 SLKTKSIDEDSACHVESENQEEEQDTKRVANRSHSARRSRAAAIHNQSERRRRDRINEKM 281
Query: 95 KSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++ MS
Sbjct: 282 KALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQFMS 318
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 53/65 (81%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AE HN SE+RRR +IN++LK+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+
Sbjct: 88 KRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 147
Query: 131 SAQGG 135
+ G
Sbjct: 148 MVRNG 152
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 77 EVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
EVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G
Sbjct: 143 EVHNLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGL 202
Query: 137 IFQSPFMSPSGHQSTEVPQI 156
P P G Q ++ Q+
Sbjct: 203 SLH-PMCFPEGLQPLQLSQM 221
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 52/61 (85%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A +HNQSER+RRD+IN+R+K L++LVPN +K+D+AS+LD+ + Y+K L+ Q+ MM
Sbjct: 212 KRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 271
Query: 131 S 131
S
Sbjct: 272 S 272
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+++K+L+EL+P+ NKSD+AS+LD+A+ Y+K+L+ QL++M
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLM 394
Query: 131 SAQGGAIFQSPFMSP 145
GG +P M P
Sbjct: 395 WMGGGV---APMMFP 406
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+++K+L+EL+P+ NKSD+AS+LD+A+ Y+K+L+ QL++M
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLM 394
Query: 131 SAQGGAIFQSPFMSP 145
GG +P M P
Sbjct: 395 WMGGGV---APMMFP 406
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 52/62 (83%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+H E HN +E+RRR +IN+RLK+L+++VP C+KS++AS LD ++Y+K+L+HQ++ M
Sbjct: 173 RRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 232
Query: 131 SA 132
S+
Sbjct: 233 SS 234
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 84/124 (67%), Gaps = 9/124 (7%)
Query: 25 DFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQ 81
D E + + T+ + H +DTD D+ +S+ + K + R +R+ +AEVHN
Sbjct: 209 DIKEMACGRSITTDRKRKHIMDTD-----DSVSLSDVIGNKSNQRSGSNRRSRAAEVHNL 263
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SERRRRDRIN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L+ QL++M G + +P
Sbjct: 264 SERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM-WMGSGMAAAP 322
Query: 142 FMSP 145
M P
Sbjct: 323 MMFP 326
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFM 143
+RRRDRIN+++++L+EL+PNCNK D+AS+LD+A+ Y+K L+ Q++MMS G + P +
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS-MGSGLCIPPML 68
Query: 144 SPSGHQSTEVPQISPNVP 161
P Q ++P + + P
Sbjct: 69 LPPAMQHLQIPPAAAHFP 86
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 51/58 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR+ +A +HNQSER+RRD+IN+R+K+L++LVPN NK+D+AS+LD+ + Y+K L+ Q++
Sbjct: 290 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 51/58 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR+ +A +HNQSER+RRD+IN+R+K+L++LVPN NK+D+AS+LD+ + Y+K L+ Q++
Sbjct: 290 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQVQ 347
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 25 DFLESSASQLPTSWHQTSHSLDTDVD-DFSDATEISEGMERKPDNRPKRTHSAEVHNQSE 83
D E + + T+ + H +DTD SDA ++ +R NR R+ +AEVHN SE
Sbjct: 154 DIKEMACGRSITTDRKRKHIMDTDESVSLSDAIGGNKSNQRSGSNR--RSRAAEVHNLSE 211
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
RRR DRIN+R+K+L+EL+P+C+K+D+AS+LD A++Y+K+L
Sbjct: 212 RRR-DRINERMKALQELIPHCSKTDKASILDGAIDYMKSL 250
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 59/84 (70%)
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
+AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M++ +
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
Query: 135 GAIFQSPFMSPSGHQSTEVPQISP 158
G + + ++ QI P
Sbjct: 258 GINLHPLCLPGTTLHPLQLSQIRP 281
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 53/68 (77%), Gaps = 8/68 (11%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK--------SDRASVLDDAVNYVKA 122
KR+ +AEVHN SERRRRDRIN+++K+L+EL+P CNK +D+AS+LD+A+ Y+K
Sbjct: 55 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKT 114
Query: 123 LRHQLEMM 130
L+ Q+++
Sbjct: 115 LQLQVQIF 122
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 66/99 (66%), Gaps = 13/99 (13%)
Query: 48 DVDDFSDATEISEGMERKPDNRPKRT-----------HSAEVHNQSERRRRDRINKRLKS 96
D D++ +E EG+E + P ++ +AEVHN SE+RRR RIN+++K+
Sbjct: 76 DTDEYDCESE--EGVEALIEEVPTKSVGASRSSSKRSRAAEVHNLSEKRRRSRINEKMKA 133
Query: 97 LKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M+S + G
Sbjct: 134 LQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSLRNG 172
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 16/107 (14%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+CNK+DRA++LD+ V+YVK LR
Sbjct: 154 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLR 213
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMG 169
Q+++ MS GGA V Q+ +VP+S G G
Sbjct: 214 LQVKVLSMSRLGGA--------------GAVAQLVADVPLSSVEGEG 246
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 53/62 (85%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R KR+ +AEVHN SE+RRR RIN+++K+L+ L+PN +K+D+AS+LDDA+ Y+K L+ Q++
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQ 86
Query: 129 MM 130
M+
Sbjct: 87 MI 88
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQLEM 129
KR+ S+EVHN SERRRRDRIN+++++L+ELVP CNK D+AS+L++ + Y+K+L+ Q++
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 130 MS 131
MS
Sbjct: 277 MS 278
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 51/62 (82%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+H E HN +E+RRR +IN+R K+L+++VP C+KS++AS LD ++Y+K+L+HQ++ M
Sbjct: 176 RRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQVQAM 235
Query: 131 SA 132
S+
Sbjct: 236 SS 237
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 59/84 (70%)
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
+AEVHN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++M++ +
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
Query: 135 GAIFQSPFMSPSGHQSTEVPQISP 158
G + + ++ QI P
Sbjct: 258 GINLHPLCLPGTTLHPLQLSQIRP 281
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 54/75 (72%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+H E HN +E+RRR +IN+RLK+L++LVP C+KS++AS LD ++Y+K+L+ Q++ M
Sbjct: 189 RRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKSNQASTLDQTIHYMKSLQQQVQAM 248
Query: 131 SAQGGAIFQSPFMSP 145
S A P + P
Sbjct: 249 SVGLAAPAVYPVVQP 263
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 18/113 (15%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+CNK+DRA++LD+ V+YVK LR
Sbjct: 55 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLR 114
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTG 175
Q+++ MS GGA V Q+ +VP+S G GI +G
Sbjct: 115 LQVKVLSMSRLGGA--------------GAVAQLVADVPLSSV--EGEGIESG 151
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL-EM 129
KR+ +AE+HN +ERRRR++IN+R+K+L++L+P CNKS + S+L+D + YVK+L Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF 206
Query: 130 MSAQGGAIFQSPFMSPSGHQS 150
M + Q P P Q+
Sbjct: 207 MPHMAMGMNQPPAYIPFPSQA 227
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 57 EISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDA 116
E E ++ + PK S H S +RRRDRIN++LK+L+EL+PNC K+D+ S+LD+A
Sbjct: 123 EGKEAASQEEEQTPK-LRSVIAHLVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEA 181
Query: 117 VNYVKALRHQLEMM-SAQGGAIFQSPFMSPSGHQSTEVP-QISPNVPISPK 165
++Y+K+L+ QL+M+ +G A P + H T P QI P P P+
Sbjct: 182 IDYLKSLQLQLQMLVMGKGMAPVVPPELQQYMHYITADPSQIPPIRPSEPR 232
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI++R+K+L+ELVP+CNK+DRA++LD+ ++YVK LR
Sbjct: 138 RPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLR 197
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 198 LQVKVLSMSRLGGA 211
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI++R+K+L+ELVP+CNK+DRA++LD+ ++YVK LR
Sbjct: 139 RPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLR 198
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 199 LQVKVLSMSRLGGA 212
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 54/66 (81%)
Query: 66 PDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRH 125
P R +R + + H+ +ER RR+RI++R+K+L+ELVPNCNK+DRA+++D+ ++YVK LR
Sbjct: 132 PRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRL 191
Query: 126 QLEMMS 131
Q++++S
Sbjct: 192 QVKVLS 197
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%)
Query: 72 RTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
R+H E H +E+RRR +IN+RLK+L++LVP C+KS++AS LD ++Y+K+L+ Q++ MS
Sbjct: 168 RSHHGEAHKLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQQQVQAMS 227
Query: 132 AQGGAIFQSPFMSP 145
A P + P
Sbjct: 228 VGLAAPAVYPIVQP 241
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 184 RARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVK 243
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 244 VLSMSRLGGAAGMAPLVA 261
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 53/59 (89%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM 129
KR+ +A +HN+SER+RRDRIN+++K+L++LVPN +K+D+AS+LD+ ++Y+K L+ Q+++
Sbjct: 272 KRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV 330
>gi|255572178|ref|XP_002527029.1| hypothetical protein RCOM_1311480 [Ricinus communis]
gi|223533664|gb|EEF35401.1| hypothetical protein RCOM_1311480 [Ricinus communis]
Length = 243
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 45 LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNC 104
++T D + D IS R ++R ++ SA++ N ERRRRDRI ++KSL+EL+P+C
Sbjct: 53 IETHDDHYDDIGGISGEPRRNKNHRNRKRISADMRNIYERRRRDRIRDKMKSLRELIPHC 112
Query: 105 NKSDRASVLDDAVNYVKALRHQLEMMSAQG--GAIFQSP 141
+K DRAS+LDDA+NY+KAL+ +EM++ G GA+ Q+P
Sbjct: 113 HKQDRASMLDDAINYLKALKLHVEMLANMGGRGALCQAP 151
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 12/106 (11%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR RI +R+K+L+ELVP CNK+DRA++LD+ V+YVK LR
Sbjct: 13 RPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLR 72
Query: 125 HQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGS 170
Q++++S MS G V Q+ +VP+S G G+
Sbjct: 73 LQIKVLS-----------MSRLGAAGA-VAQLVADVPLSSIKGEGN 106
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KRT A+ HN SE+RRR +IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+ Q++ +
Sbjct: 86 KRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 145
Query: 131 SAQGG 135
+ G
Sbjct: 146 AVMNG 150
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+
Sbjct: 171 KPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 231 LQVKVLSMSRLGGAAAVAPLVA 252
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
GM +P R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YV
Sbjct: 24 GMGARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYV 83
Query: 121 KALRHQLEM--MSAQGGA 136
K L+ Q+++ MS GGA
Sbjct: 84 KFLQLQVKVLSMSRLGGA 101
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 59/90 (65%), Gaps = 10/90 (11%)
Query: 77 EVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
EVHN SE+RRR RIN+++K+L+ LVPN +K+D+AS+LDDA+ Y+K L+ Q++M+S + G
Sbjct: 68 EVHNLSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSMRNGL 127
Query: 137 IFQSPFMSPSGHQSTEVPQISPNVPISPKL 166
+P +P P +P++
Sbjct: 128 YL----------PQVNLPVGAPEPPAAPQM 147
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 56/76 (73%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q+
Sbjct: 251 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVL 310
Query: 129 MMSAQGGAIFQSPFMS 144
MS GGA +P ++
Sbjct: 311 SMSRLGGAAAVAPLVA 326
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 50/60 (83%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AE HN SE+RRR RIN+++K+L+ L+PN NK+D+AS+LD+A+ Y+K L+ Q++ +
Sbjct: 122 KRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 68/93 (73%), Gaps = 6/93 (6%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 257 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVM 316
Query: 131 SAQGGAIFQ------SPFMSPSGHQSTEVPQIS 157
G +P M P QS + Q++
Sbjct: 317 WMGSGMAAAAAAAASTPMMFPGVQQSPYINQMA 349
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 6/102 (5%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R H+ + H+ +ER RR++I +R+K+L+ELVPN NK D+AS+LD+ + YVK L+ Q++
Sbjct: 241 RARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKFLQLQVK 300
Query: 129 M--MSAQGGAIFQSPFMS---PSGHQSTEV-PQISPNVPISP 164
+ MS G A P ++ P GH S + P + ISP
Sbjct: 301 VLSMSRLGAAGAVIPLLTDGQPEGHNSLSLSPSAGLGIDISP 342
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR RI +R+K+L+ELVP CNK+DRA++LD+ V+YVK LR
Sbjct: 17 RPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLR 76
Query: 125 HQLEMMS----AQGGAIFQ 139
Q++++S GA+ Q
Sbjct: 77 LQVKVLSMSRLGAAGAVAQ 95
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 205 RARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVK 264
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 265 VLSMSRLGGAAGMAPLVA 282
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 205 RARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVK 264
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 265 VLSMSRLGGAAGMAPLVA 282
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 63 ERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
+ KP R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK
Sbjct: 125 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 184
Query: 123 LRHQLEM--MSAQGGA 136
L+ Q+++ MS GGA
Sbjct: 185 LQLQVKVLSMSRLGGA 200
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 63 ERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
+ KP R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK
Sbjct: 125 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 184
Query: 123 LRHQLEM--MSAQGGA 136
L+ Q+++ MS GGA
Sbjct: 185 LQLQVKVLSMSRLGGA 200
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
R+ R KR + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L
Sbjct: 191 RQQRQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 250
Query: 124 RHQLEM--MSAQGGAIFQSPFMS 144
+ Q+++ MS GGA P ++
Sbjct: 251 QLQVKVLSMSRLGGATAVGPLVA 273
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 69/85 (81%), Gaps = 3/85 (3%)
Query: 49 VDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
++D ++ +S+ + K + R +R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+
Sbjct: 229 INDTDESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS 288
Query: 106 KSDRASVLDDAVNYVKALRHQLEMM 130
K+D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 289 KTDKASILDEAIDYLKSLQLQLQVM 313
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 63 ERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
+ KP R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK
Sbjct: 123 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 182
Query: 123 LRHQLEM--MSAQGGA 136
L+ Q+++ MS GGA
Sbjct: 183 LQLQVKVLSMSRLGGA 198
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
G+ +P R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YV
Sbjct: 25 GIGARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYV 84
Query: 121 KALRHQLEM--MSAQGGA 136
K L+ Q+++ MS GGA
Sbjct: 85 KFLQLQVKVLSMSRLGGA 102
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ V+YVK L+ Q++
Sbjct: 241 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVK 300
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 301 VLSMSRLGGAAAVAPLVA 318
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ V+YVK L+ Q++
Sbjct: 240 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVK 299
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 300 VLSMSRLGGAAAVAPLVA 317
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 198 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 257
Query: 129 M--MSAQGGAIFQSPFMSPSG 147
+ MS GGA +P ++ G
Sbjct: 258 VLSMSRLGGAAAVAPLVAEGG 278
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 46/53 (86%)
Query: 78 VHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
VH QSERRRRD+IN+R+K L++LVPN +K+D+AS+LD+ + Y+K L+ Q++MM
Sbjct: 238 VHKQSERRRRDKINQRMKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMM 290
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 63 ERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
+ KP R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK
Sbjct: 182 QTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKF 241
Query: 123 LRHQLEM--MSAQGGA 136
L+ Q+++ MS GGA
Sbjct: 242 LQLQVKVLSMSRLGGA 257
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 105 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 164
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 165 VLSMSRLGGAAAVAPLVA 182
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 57/60 (95%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 251 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVM 310
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 38 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 97
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 98 VLSMSRLGGAAAVAPLVA 115
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 10/91 (10%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
N KR+ A+ HN SE++RR +IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+ Q+
Sbjct: 87 NSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQV 146
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
+ ++ G G +PQ+ P
Sbjct: 147 QTLAVMNGL----------GLNPMRLPQVPP 167
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 16/112 (14%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 21 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 80
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGT 174
Q+++ MS GGA V Q+ ++P+S K G G G
Sbjct: 81 LQVKVLSMSRLGGA--------------GAVAQLVADIPLSVKGEAGDGGGA 118
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 190 LQVKVLSMSRLGGA 203
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
G+ +P R +R + + H+ +ER RR++I +R+K+L+ELVPN NK+D+AS+LD+ ++YV
Sbjct: 129 GISARPRVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYV 188
Query: 121 KALRHQLEM--MSAQGGA 136
K L+ Q+++ MS GGA
Sbjct: 189 KFLQLQVKVLSMSRLGGA 206
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
R R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q+
Sbjct: 239 ERAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQV 298
Query: 128 EMMSAQGGAIFQSPFMS 144
MS GGA +P ++
Sbjct: 299 LSMSRLGGAAAVAPLVA 315
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 190 LQVKVLSMSRLGGA 203
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 68/92 (73%), Gaps = 5/92 (5%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+++D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
Query: 131 SAQGG-----AIFQSPFMSPSGHQSTEVPQIS 157
G A SP M P S + Q++
Sbjct: 313 WMGSGMAAAAAAAASPMMFPGVQSSPYINQMA 344
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 261 RARRGQATHPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 320
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 321 VLSMSRLGGAAAVAPLVA 338
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 68/92 (73%), Gaps = 5/92 (5%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+++D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
Query: 131 SAQGG-----AIFQSPFMSPSGHQSTEVPQIS 157
G A SP M P S + Q++
Sbjct: 313 WMGSGMAAAAAAAASPMMFPGVQSSPYINQMA 344
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 166 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLR 225
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 226 LQVKVLSMSRLGGA 239
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 68/92 (73%), Gaps = 5/92 (5%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+++D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
Query: 131 SAQGG-----AIFQSPFMSPSGHQSTEVPQIS 157
G A SP M P S + Q++
Sbjct: 313 WMGSGMAAAAAAAASPMMFPGVQSSPYINQMA 344
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 121 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 180
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 181 LQVKVLSMSRLGGA 194
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 62 MERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
+ +KP R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ + YV+
Sbjct: 93 VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVR 152
Query: 122 ALRHQLEM--MSAQGGA 136
L+ Q+++ MS GGA
Sbjct: 153 FLQLQVKVLSMSRLGGA 169
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 257 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 316
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 317 VLSMSRLGGAAAVAPLVA 334
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 16/101 (15%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 166 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLR 225
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPIS 163
Q+++ MS GGA V Q+ +VP+S
Sbjct: 226 LQVKVLSMSRLGGA--------------GAVAQLVADVPLS 252
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 254 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 313
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 314 VLSMSRLGGAAAVAPLVA 331
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 62 MERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
+ +KP R +R + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ + YV+
Sbjct: 93 VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVR 152
Query: 122 ALRHQLEM--MSAQGGA 136
L+ Q+++ MS GGA
Sbjct: 153 FLQLQVKVLSMSRLGGA 169
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 112 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 171
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 172 LQVKVLSMSRLGGA 185
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 16/112 (14%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 113 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 172
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGT 174
Q+++ MS GGA V Q+ ++P+S K G G G
Sbjct: 173 LQVKVLSMSRLGGA--------------GAVAQLVADIPLSVKGEAGDGGGA 210
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 123 RPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 182
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 183 LQVKVLSMSRLGGA 196
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 53/67 (79%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA++LD+ ++YVK LR
Sbjct: 130 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLR 189
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 190 LQVKVLS 196
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 10/91 (10%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
N KR A+ HN SE++RR +IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+ Q+
Sbjct: 87 NSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQV 146
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
+ ++ G G +PQ+ P
Sbjct: 147 QTLAVMNGL----------GLNPMRLPQVPP 167
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
R+ R KR + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L
Sbjct: 184 RQQRQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 243
Query: 124 RHQLEM--MSAQGGA 136
+ Q+++ MS GGA
Sbjct: 244 QLQVKVLSMSRLGGA 258
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 172 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLR 231
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 232 LQVKVLSMSRLGGA 245
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+RT +AEVHN SERRRR+RIN+++K+L+EL+P+CNK+D+AS+LD+A+ Y+K+L+ QL++M
Sbjct: 348 RRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVM 407
Query: 131 SAQGGAIFQSPFMSP 145
G +P M P
Sbjct: 408 WMGSGM---APMMFP 419
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 226 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 285
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 286 VLSMSRLGGAAAVAPLVA 303
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 148 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLR 207
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 208 LQVKVLSMSRLGGA 221
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 96 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLR 155
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 156 LQVKVLSMSRLGGA 169
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 205 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 264
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 265 VLSMSRLGGAAAVAPLVA 282
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 52/68 (76%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
N KR A+ HN SE+RRR +IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+ Q+
Sbjct: 86 NSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQLQV 145
Query: 128 EMMSAQGG 135
+ ++ G
Sbjct: 146 QTLAVMNG 153
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 10/91 (10%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
N KR A+ HN SE++RR +IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+ Q+
Sbjct: 87 NSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQV 146
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
+ ++ G G +PQ+ P
Sbjct: 147 QTLAVMNGL----------GLNPMRLPQVPP 167
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 163 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLR 222
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 223 LQVKVLSMSRLGGA 236
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 248 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 307
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 308 VLSMSRLGGAAAVAPLVA 325
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 57/60 (95%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 233 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 292
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 65/103 (63%), Gaps = 16/103 (15%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L++LVPN NK+DRA++LD+ ++YVK LR
Sbjct: 129 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 188
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
Q+++ MS GGA V Q+ ++PIS K
Sbjct: 189 LQVKVLSMSRLGGA--------------GAVAQLVADIPISVK 217
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 57/60 (95%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 57/60 (95%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L+ QL++M
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 48/54 (88%)
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
+A +HNQSER+RRD+IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++
Sbjct: 29 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 82
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 52/68 (76%)
Query: 68 NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
N KR A+ HN SE+RRR +IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+ Q+
Sbjct: 86 NSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQV 145
Query: 128 EMMSAQGG 135
+ ++ G
Sbjct: 146 QTLAVMNG 153
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ + YVK L+ Q++
Sbjct: 31 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVK 90
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 91 VLSMSRLGGAAAVAPLVA 108
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 65/103 (63%), Gaps = 16/103 (15%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L++LVPN NK+DRA++LD+ ++YVK LR
Sbjct: 178 RPKVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLR 237
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
Q+++ MS GGA V Q+ ++PIS K
Sbjct: 238 LQVKVLSMSRLGGA--------------GAVAQLVADIPISVK 266
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 50 DDFSDATEISEGMERKPDNR---PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK 106
++ S+ TE+ + K R +R +AEVHN SERRRRDRIN+++K+L++L+P+ +K
Sbjct: 41 EEQSEDTELKSALGNKSSQRTGSARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK 100
Query: 107 SDRASVLDDAVNYVKA 122
+D+AS+L++A+ Y+K+
Sbjct: 101 TDKASMLEEAIEYLKS 116
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NKSDRA++LD+ V+YVK LR
Sbjct: 177 RPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLR 236
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 237 LQVKVLSMSRLGGA 250
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 197 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVK 256
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 257 VLSMSRLGGAGAVAPLVA 274
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 48/54 (88%)
Query: 75 SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
+A +HNQSER+RRD+IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q++
Sbjct: 283 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQ 336
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 200 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVK 259
Query: 129 M--MSAQGGAIFQSPFMS 144
+ MS GGA +P ++
Sbjct: 260 VLSMSRLGGAGAVAPLVA 277
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 218 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 277
Query: 129 MMSAQ--GGAIFQSP 141
++S GGA P
Sbjct: 278 VLSVSRLGGATAAMP 292
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVPN NK+DRA +LD+ ++YVK LR
Sbjct: 119 RPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLR 178
Query: 125 HQLEM--MSAQGGA 136
Q+++ MS GGA
Sbjct: 179 LQVKVLSMSRLGGA 192
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 55/67 (82%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP +R +R + + H+ +ER RR++I++R+K+L+ELVPN NK+D++S+LD+ ++YVK L+
Sbjct: 318 KPRSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQ 377
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 378 LQVKVLS 384
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 47/58 (81%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR+ +A +H SERRRR +IN+ +K+L+EL+P C K+DR+S+LDD + YVK+L+ Q++
Sbjct: 274 KRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 55/71 (77%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
G+ KP R +R + + H+ +ER RR++I+ R+KSL++LVPN NK+D+AS+LD+ ++YV
Sbjct: 313 GVGVKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYV 372
Query: 121 KALRHQLEMMS 131
K L+ Q++++S
Sbjct: 373 KFLQLQVKVLS 383
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 50 DDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK 106
++ S+ TE+ + K R +R +AEVHN SERRRRDRIN+++K+L++L+P+ +K
Sbjct: 174 EEQSEDTELKSALGNKSSQRAGLARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSK 233
Query: 107 SDRASVLDDAVNYVKA 122
+D+AS+L++A+ Y+K+
Sbjct: 234 TDKASMLEEAIEYLKS 249
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
Query: 129 M--MSAQGGAIFQSPFMSPSG 147
+ MS GGA S +S +G
Sbjct: 199 VLSMSRLGGAASVSSQLSEAG 219
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L+ELVP NK+DRA+++D+ V+YVK LR
Sbjct: 160 RPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLR 219
Query: 125 HQLEMMS----AQGGAIFQ 139
Q++++S GA+ Q
Sbjct: 220 LQVKVLSMSRLGAAGAVAQ 238
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
Query: 129 M--MSAQGGAIFQSPFMSPSG 147
+ MS GGA S +S +G
Sbjct: 199 VLSMSRLGGAASVSSQISEAG 219
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
Query: 129 M--MSAQGGAIFQSPFMSPSG 147
+ MS GGA S +S +G
Sbjct: 199 VLSMSRLGGAASVSSQISEAG 219
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R KR + + H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YV+ L+ Q++
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQLQVK 254
Query: 129 M--MSAQGGA 136
+ MS GGA
Sbjct: 255 VLSMSRLGGA 264
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 67/102 (65%), Gaps = 9/102 (8%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
G+ KP R +R + + H+ +ER RR++I+ R+K+L++LVPN NK+D+AS+LD+ ++YV
Sbjct: 310 GVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYV 369
Query: 121 KALRHQLEMMS----AQGGAIFQSPFMSPS---GHQSTEVPQ 155
K L+ Q++++S GA+ P ++ S G+ +PQ
Sbjct: 370 KFLQLQVKVLSMSRVGAPGAVL--PLLTESKTEGYHGQPLPQ 409
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 52/67 (77%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I +R+K+L+ELVPN NK+D+AS+LD+ + YVK L+
Sbjct: 293 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 352
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 353 LQVKVLS 359
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 56/74 (75%)
Query: 58 ISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAV 117
+ G+ KP R +R + + H+ +ER RR++I+ R+K+L++LVPN NK+D+AS+LD+ +
Sbjct: 310 VGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEII 369
Query: 118 NYVKALRHQLEMMS 131
+YVK L+ Q++++S
Sbjct: 370 DYVKFLQLQVKVLS 383
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 51/58 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR+ +A +HN+SER+RRDRIN+++++L++LVPN +K+D+AS+LD+ + ++K L+ Q++
Sbjct: 257 KRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQAQVQ 314
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 51/58 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR+ +A +HN+SER+RRDRIN+++++L++LVPN +K+D+AS+LD+ + ++K L+ Q++
Sbjct: 257 KRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQAQVQ 314
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 56/74 (75%)
Query: 58 ISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAV 117
+ G+ KP R +R + + H+ +ER RR++I+ R+K+L++LVPN NK+D+AS+LD+ +
Sbjct: 310 VGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEII 369
Query: 118 NYVKALRHQLEMMS 131
+YVK L+ Q++++S
Sbjct: 370 DYVKFLQLQVKVLS 383
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 52/67 (77%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I +R+K+L+ELVPN NK+D+AS+LD+ + YVK L+
Sbjct: 146 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 205
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 206 LQVKVLS 212
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 67/102 (65%), Gaps = 9/102 (8%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
G+ KP R +R + + H+ +ER RR++I+ R+K+L++LVPN NK+D+AS+LD+ ++YV
Sbjct: 275 GVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYV 334
Query: 121 KALRHQLEMMS----AQGGAIFQSPFMSPS---GHQSTEVPQ 155
K L+ Q++++S GA+ P ++ S G+ +PQ
Sbjct: 335 KFLQLQVKVLSMSRVGAPGAVL--PLLTESKTEGYHGQPLPQ 374
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I++R+K+L++LVPN NK+D+AS+LD+ ++YVK L+
Sbjct: 312 KPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 371
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 372 LQVKVLS 378
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R+ A+ HN SE+RRR +IN+++K+L++L+PN NK+D+AS+LD+A+ Y+K L+ Q++ +
Sbjct: 101 QRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQAL 160
Query: 131 SAQGGAIFQSPFMSPSGHQSTEV 153
+ G + +P P Q T+
Sbjct: 161 AVMNG-LGLNPMRLPPVMQPTQT 182
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MSAQGGA 136
H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++ MS GGA
Sbjct: 224 HSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 283
Query: 137 IFQSPFMS 144
+P ++
Sbjct: 284 AGMAPLVA 291
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVP+ NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 145 RARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVK 204
Query: 129 M--MSAQGGAIFQSPF---MSP 145
+ MS GGA +P MSP
Sbjct: 205 VLSMSRLGGAGAVAPLVANMSP 226
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNC-NKSDRASVLDDAVNYVKALRHQLEM 129
+ H+A HN +E+RRR +I +R ++L+ LVP C NKS++AS LD + Y+K+L+HQLE
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 130 MSAQG 134
SA G
Sbjct: 252 TSAVG 256
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 52/67 (77%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I+ R+K+L+ELVPN N++D+AS+LD+ + YVK L+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 355 LQVKVLS 361
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 9/103 (8%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I+ R+K L+ELVPN NK+++AS+LD+ ++YVK L+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
Q+++ MS G A P + TE SP +SP+
Sbjct: 371 LQVKVLSMSRLGAAEAVVPLL-------TETQTESPGFLLSPR 406
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 51/58 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR+ +A +HN+SER+RRDRIN+++++L++LVPN +K+D+AS+LD+ ++++K L+ ++
Sbjct: 259 KRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQATVQ 316
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 51/58 (87%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
KR+ +A +HN+SER+RRDRIN+++++L++LVPN +K+D+AS+LD+ ++++K L+ ++
Sbjct: 259 KRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQATVQ 316
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 50/63 (79%)
Query: 73 THSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
T +AEV N S +RRR RIN+ +K+L+ L+PN NK+D+A +LD+A++Y+K L+ Q++M+S
Sbjct: 74 TRAAEVLNLSGKRRRSRINENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQMLSL 133
Query: 133 QGG 135
+ G
Sbjct: 134 RNG 136
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YV+ L+ Q++
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQLQVK 198
Query: 129 M--MSAQGGAIFQSPFMSPSG 147
+ MS GGA S +S +G
Sbjct: 199 VLSMSRLGGAASVSSQISEAG 219
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNC-NKSDRASVLDDAVNYVKALRHQLEM 129
+ H+A HN +E+RRR +I +R ++L+ LVP C NKS++AS LD + Y+K+L+HQLE
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 130 MSAQG 134
SA G
Sbjct: 139 TSAVG 143
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 9/103 (8%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I+ R+K L+ELVPN NK+++AS+LD+ ++YVK L+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 125 HQLEM--MSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK 165
Q+++ MS G A P + TE SP +SP+
Sbjct: 371 LQVKVLSMSRLGAAEAVVPLL-------TETQTESPGFLLSPR 406
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 53/67 (79%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I++R+K+L+ LVPN NK+D+AS+LD+ ++YVK L+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 373 LQVKVLS 379
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 53/67 (79%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I++R+K+L+ LVPN NK+D+AS+LD+ ++YVK L+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 373 LQVKVLS 379
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 53/67 (79%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I++R+K+L+ LVPN NK+D+AS+LD+ ++YVK L+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 373 LQVKVLS 379
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELV N NK+D+AS+LD+ ++YVK L+ Q+
Sbjct: 146 RARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVL 205
Query: 129 MMSAQGGA 136
MS GGA
Sbjct: 206 SMSRLGGA 213
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 53/67 (79%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I++R+K+L+ LVPN NK+D+AS+LD+ ++YVK L+
Sbjct: 236 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 296 LQVKVLS 302
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 53/67 (79%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+K+L++LVPN NK+D+AS+LD+ V+YVK L+
Sbjct: 1 RPRVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQ 60
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 61 LQVKVLS 67
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 54/67 (80%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I++R+K+L++LVPN NK+D++S+LD+ ++YVK L+
Sbjct: 317 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 376
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 377 LQVKVLS 383
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELV N NK+D+AS+LD+ ++YVK L+ Q+
Sbjct: 118 RARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVL 177
Query: 129 MMSAQGGA 136
MS GGA
Sbjct: 178 SMSRLGGA 185
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 56/74 (75%)
Query: 58 ISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAV 117
+ G+ KP R +R + + H+ +ER RR++I+ R+K+L++LVPN NK+D+AS+LD+ +
Sbjct: 310 VGNGVGVKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEII 369
Query: 118 NYVKALRHQLEMMS 131
++VK L+ Q++++S
Sbjct: 370 DHVKFLQLQVKVLS 383
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 12/88 (13%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q++
Sbjct: 160 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 219
Query: 129 M------------MSAQGGAIFQSPFMS 144
MS GGA +P ++
Sbjct: 220 ASTYTKLLIHVLSMSRLGGAAAVAPLVA 247
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 59/86 (68%), Gaps = 5/86 (5%)
Query: 57 EISEGMERKPDN----RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRAS 111
E + + +K DN R +R + + H+ +ER RR++IN+R+K L++LVP CNK + +A
Sbjct: 281 EKNSNVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAV 340
Query: 112 VLDDAVNYVKALRHQLEMMSAQGGAI 137
+LD+ +NYV++L+HQ+E +S + +
Sbjct: 341 MLDEIINYVQSLQHQVEFLSMKLATV 366
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 53 SDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SD 108
+D ++ SE +KPD R +R + + H+ +ER RR++I++R+K L++L+P CNK +
Sbjct: 174 ADTSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAG 233
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQGGAI 137
+A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 234 KAGMLDEIINYVQSLQRQVEFLSMKLAAV 262
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 63/89 (70%), Gaps = 6/89 (6%)
Query: 53 SDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SD 108
+D +++SE +KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK +
Sbjct: 240 ADTSKVSE--VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 297
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQGGAI 137
+A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 298 KAGMLDEIINYVQSLQRQVEFLSMKLAAV 326
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 53/66 (80%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I++R+K+L++LVPN NK+D++S+LD+ ++YVK L+
Sbjct: 316 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 375
Query: 125 HQLEMM 130
Q++++
Sbjct: 376 LQVKVL 381
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 62/89 (69%), Gaps = 4/89 (4%)
Query: 53 SDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SD 108
+D ++ SE +KPD R +R + + H+ +ER RR++I++R+K L++L+P CNK +
Sbjct: 174 ADTSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAG 233
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQGGAI 137
+A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 234 KAGMLDEIINYVQSLQRQVEFLSMKLAAV 262
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 9/101 (8%)
Query: 73 THSAEVHNQS-ERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM-- 129
H+A VH + RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++
Sbjct: 128 MHAAAVHQPPFGQLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 187
Query: 130 MSAQGGAIFQSPF---MSPSGHQSTEVPQI---SPNVPISP 164
MS GGA P M+ HQ + Q+ PN+ ++P
Sbjct: 188 MSRLGGAAAVGPLVASMASERHQRPRLIQLKLRGPNMMLNP 228
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+HQ+
Sbjct: 120 RARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQV 179
Query: 128 EMMSAQGGAIFQSPFMSPS 146
E +S + A+ M+P+
Sbjct: 180 EFLSMKLEAVNSRANMNPT 198
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 51/67 (76%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I+ R+K+L+ELVPN N++D+AS+LD+ + YVK L+
Sbjct: 295 KPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQ 354
Query: 125 HQLEMMS 131
Q+++ S
Sbjct: 355 LQVKVRS 361
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 63/89 (70%), Gaps = 6/89 (6%)
Query: 53 SDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SD 108
+D +++SE +KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK +
Sbjct: 129 ADTSKVSE--VQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITG 186
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQGGAI 137
+A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 187 KAGMLDEIINYVQSLQRQVEFLSMKLAAV 215
>gi|225898737|dbj|BAH30499.1| hypothetical protein [Arabidopsis thaliana]
Length = 363
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AE +N ER +R+ INK++++L+ L+PN +K D S+LD+A+NY+ L+ Q++MM
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 244
Query: 131 SAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDVLF 181
+ G F +P M + P P ++G+ G+G M + F
Sbjct: 245 TM--GNRFVTPSM------------MMPLGPNYSQMGLAMGVGMQMGEQQF 281
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Query: 54 DATE--ISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNC-NKSDRA 110
D+TE S G +K +R+H AE HN +E+RRR +I+ +LK+L++LVP C +KS++A
Sbjct: 1 DSTENYYSCGSRKKATGGARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQA 60
Query: 111 SVLDDAVNYVKALRHQLEM 129
S+LD + ++K+L+ Q+++
Sbjct: 61 SILDQTIQHIKSLQQQIQV 79
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 83 ERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MSAQGGAIFQS 140
+R RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++ MS GGA +
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMA 210
Query: 141 PFMS 144
P ++
Sbjct: 211 PLVA 214
>gi|145712878|gb|ABP96468.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712880|gb|ABP96469.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712882|gb|ABP96470.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712886|gb|ABP96472.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712892|gb|ABP96475.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712898|gb|ABP96478.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 63/78 (80%), Gaps = 3/78 (3%)
Query: 49 VDDFSDATEISEGMERKPDNRP---KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN 105
++D ++ +S+ + K + R +R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+
Sbjct: 174 INDTDESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS 233
Query: 106 KSDRASVLDDAVNYVKAL 123
K+D+AS+LD+A++Y+K+L
Sbjct: 234 KTDKASILDEAIDYLKSL 251
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP CNK S A VLD +N+V++L+H++
Sbjct: 161 RVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEV 220
Query: 128 EMMSAQGGAI 137
E++S + A+
Sbjct: 221 EILSMKLAAV 230
>gi|42566136|ref|NP_191768.2| transcription factor PIF6 [Arabidopsis thaliana]
gi|193211499|gb|ACF16169.1| At3g62090 [Arabidopsis thaliana]
gi|332646785|gb|AEE80306.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 346
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 16/112 (14%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AE +N ER +R+ INK++++L+ L+PN +K D S+LD+A+NY+ L+ Q++MM
Sbjct: 168 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 227
Query: 131 SAQGGAIFQSP-FMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDVLF 181
+ G F +P M P G P ++G+ G+G M + F
Sbjct: 228 TM--GNRFVTPSMMMPLG-------------PNYSQMGLAMGVGMQMGEQQF 264
>gi|145332927|ref|NP_001078329.1| transcription factor PIF6 [Arabidopsis thaliana]
gi|75301050|sp|Q8L5W7.1|PIF6_ARATH RecName: Full=Transcription factor PIF6; AltName: Full=Basic
helix-loop-helix protein 132; Short=AtbHLH132;
Short=bHLH 132; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 2; AltName: Full=Protein
PHYTOCHROME-INTERACTING FACTOR 6; AltName:
Full=Transcription factor EN 111; AltName: Full=bHLH
transcription factor bHLH132
gi|22535494|dbj|BAC10690.1| PIF3 like basic Helix Loop Helix protein 2 [Arabidopsis thaliana]
gi|332646786|gb|AEE80307.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 363
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 16/112 (14%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AE +N ER +R+ INK++++L+ L+PN +K D S+LD+A+NY+ L+ Q++MM
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 244
Query: 131 SAQGGAIFQSP-FMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMVDVLF 181
+ G F +P M P G P ++G+ G+G M + F
Sbjct: 245 TM--GNRFVTPSMMMPLG-------------PNYSQMGLAMGVGMQMGEQQF 281
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY+++L+HQ+
Sbjct: 129 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQV 188
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 189 EFLSMKLEAV 198
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++KSL++LVP CNK + RA +LD+ +NYV++L+ Q+
Sbjct: 203 RARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQV 262
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEV 153
E +S + A+ P + EV
Sbjct: 263 EFLSMKLAALNPRPEFNIDNFSGKEV 288
>gi|297817562|ref|XP_002876664.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
gi|297322502|gb|EFH52923.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 14/106 (13%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AE +N ER++R +NK++++L++L+PN ++ D S+LD+A+NY+K L+ Q++MM
Sbjct: 173 KRKRNAEAYNSPERKQRRDVNKKMRTLQDLLPNSHEDDNESMLDEAINYMKNLQLQVQMM 232
Query: 131 SAQGGAIFQSP-FMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTG 175
+ G F +P M P G +++ L MG G+ G
Sbjct: 233 TM--GNRFVTPSMMLPLGLHYSQM-----------DLAMGMGMQMG 265
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+++VP CNK +A VLD+ +NY+++L+HQ+
Sbjct: 101 RARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQV 160
Query: 128 EMMSAQGGAIFQSPFMSPS 146
E +S + A+ MSP+
Sbjct: 161 EFLSMKLEAVNSRLSMSPT 179
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 46/53 (86%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q++++S
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 322
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 74 HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MS 131
+ + H+ +ER RR+RI +R+K+L+ELVP+ NK+D+AS+LD+ ++YVK L+ Q+++ MS
Sbjct: 170 QATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSMS 229
Query: 132 AQGGAIFQSPFMS 144
GGA P +
Sbjct: 230 RLGGAAAVGPLAA 242
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 51 DFSDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK- 106
D S TE+ +KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK
Sbjct: 222 DNSKVTEV-----QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 276
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
+ +A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 277 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 307
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY+++L+HQ+
Sbjct: 129 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQV 188
Query: 128 EMM 130
E M
Sbjct: 189 EFM 191
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 47 TDVDDFSDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPN 103
T + D ++ SE +KP+ R +R + + H+ +ER RR++I++R+K L++LVP
Sbjct: 187 TSAETSKDNSKGSEVQNQKPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPG 246
Query: 104 CNK-SDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
CNK + +A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 247 CNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 281
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 46/53 (86%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
H+ +ER RR+RI +R+KSL+ELVPN NK+D+AS+LD+ ++YVK L+ Q++++S
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLS 322
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 51 DFSDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK- 106
D S TE+ +KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK
Sbjct: 219 DNSKVTEV-----QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKI 273
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
+ +A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 274 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 304
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Query: 54 DATEISEGMERKPDN----RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SD 108
+A + S G E +N R KR + H+ +ER RR+RI++R++ L+ELVP CNK +
Sbjct: 216 EAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITG 275
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQ 133
+A +LD+ +NYV++L+ Q+E +S +
Sbjct: 276 KAVMLDEIINYVQSLQQQVEFLSMK 300
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NY
Sbjct: 242 QKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 301
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + A+
Sbjct: 302 VQSLQRQVEFLSMKLAAV 319
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 51/67 (76%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R +R + + H+ +ER RR++I +R+K+L+ELVPN +K D+AS+LD+ + YVK L+
Sbjct: 348 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQ 407
Query: 125 HQLEMMS 131
Q++++S
Sbjct: 408 LQVKVLS 414
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFM 143
+RRR +IN+RLK+L++LVP C+KS++AS LD ++Y+K+L+HQ++ MS + P +
Sbjct: 223 QRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPVV 282
Query: 144 SPSG 147
P G
Sbjct: 283 QPQG 286
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K+L++LVP CNK +A VLD+ +NY+++L HQ+
Sbjct: 113 RARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQV 172
Query: 128 EMMSAQGGAIFQSP 141
E +S + A+ P
Sbjct: 173 EFLSMKLEAVNSRP 186
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+HQ+
Sbjct: 92 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQV 151
Query: 128 EMMSAQGGAIFQSPFMSPS 146
E +S + A+ M+P+
Sbjct: 152 EFLSMKLEAVNSRFNMNPT 170
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NY
Sbjct: 242 QKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 301
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + A+
Sbjct: 302 VQSLQRQVEFLSMKLAAV 319
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 196
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 197 EFLSMKLEAV 206
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 196
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 197 EFLSMKLEAV 206
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 135 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 194
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 195 EFLSMKLEAV 204
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 125 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQI 184
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 185 EFLSMKLSAI 194
>gi|145712876|gb|ABP96467.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712884|gb|ABP96471.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712888|gb|ABP96473.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712890|gb|ABP96474.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712894|gb|ABP96476.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712896|gb|ABP96477.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712900|gb|ABP96479.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712902|gb|ABP96480.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 51/53 (96%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+R+ +AEVHN SERRRRDRIN+R+K+L+EL+P+C+K+D+AS+LD+A++Y+K+L
Sbjct: 199 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSL 251
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 99 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQI 158
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 159 EFLSMKLSAI 168
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 125 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQI 184
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 185 EFLSMKLSAI 194
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 65 KPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYV 120
KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV
Sbjct: 179 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYV 238
Query: 121 KALRHQLEMMSAQGGAI 137
++L+ Q+E +S + A+
Sbjct: 239 QSLQRQVEFLSMKLAAV 255
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 59 SEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLD 114
SE KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD
Sbjct: 131 SEIQNHKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLD 190
Query: 115 DAVNYVKALRHQLEMMSAQGGAI 137
+ +NYV++L+ Q+E +S + A+
Sbjct: 191 EIINYVQSLQRQVEFLSMKLAAV 213
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 129 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQI 188
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 189 EFLSMKLSAI 198
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 96 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 155
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 156 EFLSMKLEAV 165
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 9/85 (10%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK---SDRASVLDDAVNYVKALRH 125
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK +D+AS+LD+ ++YVK L+
Sbjct: 239 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQL 298
Query: 126 QLEM------MSAQGGAIFQSPFMS 144
Q++ MS GGA +P ++
Sbjct: 299 QVKASMHVLSMSRLGGAAAVAPLVA 323
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 125 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQI 184
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 185 EFLSMKLSAI 194
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 14/103 (13%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+HQ+
Sbjct: 217 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQV 276
Query: 128 EMMSAQGGAI------------FQSPFMSPSGHQSTEVPQISP 158
E +S + ++ S M SG T PQISP
Sbjct: 277 EFLSMKLASVNTTRVDFNVDSLISSKQMYQSGTSLTH-PQISP 318
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN+R+K L+ELVP CNK S A VLD+ +N+V++L+ Q+
Sbjct: 178 RARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQCQV 237
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 238 EFLSMRLAAV 247
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 124 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 183
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 184 EFLSMKLSAI 193
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR+RI++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 247 RAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQV 306
Query: 128 EMMSAQGGAIF 138
E +S + ++
Sbjct: 307 EFLSMKLATVY 317
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 119 RAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 178
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 179 EFLSMKLSAV 188
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 14/103 (13%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+HQ+
Sbjct: 255 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQV 314
Query: 128 EMMSAQGGAI------------FQSPFMSPSGHQSTEVPQISP 158
E +S + ++ S M SG T PQISP
Sbjct: 315 EFLSMKLASVNTTRVDFNVDSLISSKQMYQSGTSLTH-PQISP 356
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 60 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 119
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 120 EFLSMKLEAV 129
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN+R+K L+ELVP CNK S A VLD+ +N+V+ L+ Q+
Sbjct: 183 RARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQV 242
Query: 128 EMMSAQGGAI 137
E++S + A+
Sbjct: 243 EILSMRLAAV 252
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 99 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQI 158
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 159 EFLSMKLSAI 168
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L++LVP CNK +ASVLD+ +NYV+AL Q+
Sbjct: 115 RARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQV 174
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 175 EFLSMKLEAV 184
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 65 KPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYV 120
KPD R +R + + H+ +ER RR++I+K++K L++LVP CNK + +A +LD+ +NYV
Sbjct: 184 KPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYV 243
Query: 121 KALRHQLEMMS 131
++L+ Q+E +S
Sbjct: 244 QSLQRQVEFLS 254
>gi|294462676|gb|ADE76883.1| unknown [Picea sitchensis]
Length = 244
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 94 LKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEV 153
+++L+EL+P+CNKSD+AS+LD+A+ Y+K L+ Q+++MS G + P + P G Q +V
Sbjct: 1 MRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQIMSMG-GGMGMPPLVFPGGMQHFQV 59
Query: 154 PQISPNVPISPKLGMGSGIGTGMVDVLFSWSSRDII 189
PQ++ P+ +G+G G GM+D + + S R ++
Sbjct: 60 PQMAHLSPMG--MGIGMGYSMGMLD-MAATSGRPVM 92
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 53/73 (72%), Gaps = 4/73 (5%)
Query: 65 KPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYV 120
KPD R +R + + H+ +ER RR++I+K++K L++LVP CNK + +A +LD+ +NYV
Sbjct: 184 KPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYV 243
Query: 121 KALRHQLEMMSAQ 133
++L+ Q+E +S +
Sbjct: 244 QSLQRQVEFLSLK 256
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 629 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 688
Query: 128 EMMSAQGGAI 137
E +S + I
Sbjct: 689 EFLSMKLSTI 698
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 629 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 688
Query: 128 EMMSAQGGAI 137
E +S + I
Sbjct: 689 EFLSMKLSTI 698
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 165 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQV 224
Query: 128 EMMS 131
E +S
Sbjct: 225 EFLS 228
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 165 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQV 224
Query: 128 EMMS 131
E +S
Sbjct: 225 EFLS 228
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++K L++LVP CNK + RA +LD+ +NYV++L+ Q+
Sbjct: 38 RARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQV 97
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 98 EFISMKLAAV 107
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 20/145 (13%)
Query: 7 VASGDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKP 66
V DS K SS N N +S A +L +TS +LD + D S+A E S G +
Sbjct: 70 VVEDDSTKVVSSSNGNGNAVNDSDAKRL-----KTSGNLDENHDSKSEA-EPSSGKHVEQ 123
Query: 67 DNRP-------------KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASV 112
+ +P +R + + H+ +ER RR++I++R+K L++LVP CNK +A V
Sbjct: 124 NTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 183
Query: 113 LDDAVNYVKALRHQLEMMSAQGGAI 137
LD+ +NY+++L+ Q+E +S + A+
Sbjct: 184 LDEIINYIQSLQRQVEFLSMKLEAV 208
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY+++L+ Q+
Sbjct: 127 RARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQV 186
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 187 EFLSMKLEAV 196
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP CNK S A VLD+ +N+V++L+ Q+
Sbjct: 202 RARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQV 261
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 262 EFLSMRLAAV 271
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 113 RARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQV 172
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 173 EFLSMKLEAV 182
>gi|297821098|ref|XP_002878432.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
gi|297324270|gb|EFH54691.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 18/107 (16%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR +AE +N ER++R INK++++L++L+PN +K D S+LD+A+ Y+K L+ Q++MM
Sbjct: 152 KRKRNAEANNSPERKQRRDINKKMRTLQDLLPNSHKDDNESMLDEAIIYMKNLKLQVQMM 211
Query: 131 SAQGGAIFQSP-FMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGM 176
+ G F +P M P G ++ MG +G GM
Sbjct: 212 TM--GNRFVTPSMMLPLGLHYSQ---------------MGLAMGMGM 241
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+++VP CNK +A VLD+ +NY+++L+HQ+
Sbjct: 101 RARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQV 160
Query: 128 EMMSAQGGAIFQSPFMSP 145
E + + A+ MSP
Sbjct: 161 EFLFMKLEAVNSRLSMSP 178
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 126 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 185
Query: 128 EMMSAQGGAI 137
E +S + I
Sbjct: 186 EFLSMKLSTI 195
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+ L++LVP CNK +ASVLD+ +NY++AL+ Q+
Sbjct: 132 RARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 191
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 192 EFLSMKLEAV 201
>gi|339716196|gb|AEJ88337.1| putative MYC protein, partial [Tamarix hispida]
Length = 521
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 29 SSASQLPTSWHQTSHSLDTD-------VDDFSDATEISEGMERKPDNRPKRTHSAEV--- 78
+S LP+S S ++D+D V + A+ + + E+KP R ++ +
Sbjct: 393 TSGVLLPSSGGVKSSTVDSDHSDLEASVKEADSASRVVDPAEKKPRKRGRKPANGREEPL 452
Query: 79 -HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+K L+ +L+
Sbjct: 453 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELKSKLQ 503
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 49/63 (77%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + H+ +ER RR++I+ R+K+L+ELVPN NK+D+AS+L++ + Y+K L+ Q +
Sbjct: 283 RARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTK 342
Query: 129 MMS 131
++S
Sbjct: 343 VLS 345
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 7 RARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQV 66
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 67 EFLSMKVAAL 76
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 94 RARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQV 153
Query: 128 EMMSAQGGAIFQSPFMSPS 146
E +S + A+ ++PS
Sbjct: 154 EFLSMKLEAVNSRINVNPS 172
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K A VLD+ +N+V+ L+ Q+
Sbjct: 186 RARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQV 245
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 246 EMLSMRLAAV 255
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 233 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 292
Query: 128 EMMSAQ 133
E +S +
Sbjct: 293 EFLSMK 298
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 147 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 206
Query: 128 EMMS 131
E +S
Sbjct: 207 EFLS 210
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K A VLD+ +N+V++L+ Q+
Sbjct: 205 RARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQV 264
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 265 EMLSMRLAAV 274
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 140 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 199
Query: 128 EMMSAQGGAIFQSPFMSPS 146
E +S + A+ M+P+
Sbjct: 200 EFLSMKLEAVNSRMNMNPT 218
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +ASVLD+ +NY+++L+ Q+
Sbjct: 125 RARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQV 184
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 185 EFLSMKLEAV 194
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K A VLD+ +N+V++L+ Q+
Sbjct: 205 RARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQV 264
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 265 EMLSMRLAAV 274
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 194 VQSLQQQVEFLSMKLSVI 211
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 374 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 433
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 434 EFLSMKLAAV 443
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 147 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 206
Query: 128 EMMSAQGGAIFQSPFMSPS 146
E +S + A+ M+P+
Sbjct: 207 EFLSMKLEAVNSRMGMNPT 225
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 195 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 254
Query: 128 EMMS 131
E +S
Sbjct: 255 EFLS 258
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 147 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 206
Query: 128 EMMS 131
E +S
Sbjct: 207 EFLS 210
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 55 ATEISEGMERKP--DNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRAS 111
+ E SE E+ P R +R + + H+ +ER RR++IN R+K L+ELVP CNK S A
Sbjct: 182 SNETSEEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTAL 241
Query: 112 VLDDAVNYVKALRHQLEMMSAQGGAI 137
VLD+ +++V++L+ Q+E +S + A+
Sbjct: 242 VLDEIISHVQSLQRQVEFLSMRLAAV 267
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+KR+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 354 RARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 413
Query: 128 EMMSAQ 133
E +S +
Sbjct: 414 EFLSMK 419
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K A VLD+ +N+V++L+ Q+
Sbjct: 185 RARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQV 244
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 245 EMLSMRLAAV 254
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 62/91 (68%), Gaps = 5/91 (5%)
Query: 51 DFSDATEISEGMERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK- 106
D S++ + S+ E KPD R +R + + H+ +ER RR++I++R+ L++LVP CNK
Sbjct: 175 DTSNSKQNSKASE-KPDYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKV 233
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
+ +A +LD+ +NYV++L+ Q+E +S + A+
Sbjct: 234 TGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 264
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 130 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 189
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 190 VQSLQQQVEFLSMKLSVI 207
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 57 EISEGMERKP--DNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVL 113
EIS E+ P R +R + + H+ +ER RR++IN R+K L+ELVP CNK S A VL
Sbjct: 175 EISGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVL 234
Query: 114 DDAVNYVKALRHQLEMMSAQGGAI 137
D +N+V++L++++E++S + A+
Sbjct: 235 DKIINHVQSLQNEVEILSMKLAAV 258
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 188 RARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQV 247
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 248 EFLSMKLAVL 257
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 194 VQSLQQQVEFLSMKLSVI 211
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 194 VQSLQQQVEFLSMKLSVI 211
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 191 RARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 250
Query: 128 EMMS 131
E +S
Sbjct: 251 EFLS 254
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 195 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 254
Query: 128 EMMS 131
E +S
Sbjct: 255 EFLS 258
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 118 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 177
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 178 VQSLQQQVEFLSMKLSVI 195
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K A VLD+ +N+V++L+ Q+
Sbjct: 201 RARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQV 260
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 261 EMLSMRLAAV 270
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 162 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQV 221
Query: 128 EMMS 131
E +S
Sbjct: 222 EFLS 225
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 194 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 253
Query: 128 EMMS 131
E +S
Sbjct: 254 EFLS 257
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 118 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 177
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 178 VQSLQQQVEFLSMKLSVI 195
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV+AL+ Q+
Sbjct: 123 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQV 182
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 183 EFLSMKLAAV 192
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 195 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 254
Query: 128 EMMS 131
E +S
Sbjct: 255 EFLS 258
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 194 VQSLQQQVEFLSMKLSVI 211
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 165 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQV 224
Query: 128 EMMS 131
E +S
Sbjct: 225 EFLS 228
>gi|449441077|ref|XP_004138310.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 321
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
Query: 54 DATEISEGMERKPD----NRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D +E M+ K D NR RT +A HNQ ERRRRDRIN+R+K L++LVPN +K+DR
Sbjct: 148 DGSEKEYNMKGKTDGSCSNRRTRT-AAINHNQYERRRRDRINQRMKDLQKLVPNGSKTDR 206
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQGGAIFQ 139
AS+LDD + Y+K L+ Q++ M + A+ Q
Sbjct: 207 ASLLDDTIQYLKQLQAQVQFMDSIRSAVPQ 236
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193
Query: 120 VKALRHQLEMMSAQGGAI 137
V++L+ Q+E +S + I
Sbjct: 194 VQSLQQQVEFLSMKLSVI 211
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK---SDRASVLDDAVNYVKALRH 125
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK +D+AS+LD+ ++YVK L+
Sbjct: 251 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQL 310
Query: 126 QLEM------------MSAQGGAIFQSPFMS 144
Q++ MS GGA +P ++
Sbjct: 311 QVKASTYTKLLIHVLSMSRLGGAAAVAPLVA 341
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 128 EMMSAQGGAIFQSPFMSPS---------GHQSTEVPQI 156
E +S + A+ + M+P G Q+ E P+I
Sbjct: 197 EFLSMKLEAV--NSRMNPGIEVFPPKEFGQQAFENPEI 232
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 12/98 (12%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 128 EMMSAQGGAIFQSPFMSPS---------GHQSTEVPQI 156
E +S + A+ + M+P G Q+ E P+I
Sbjct: 197 EFLSMKLEAV--NSRMNPGIEVFPPKEFGQQAFENPEI 232
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 128 EMMS 131
E +S
Sbjct: 265 EFLS 268
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 158 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 217
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 218 EFLSMKLEAV 227
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 155 RAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 214
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 215 EFLSMKLSAI 224
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+++VP CNK +ASVLD+ +NY+++L+ Q+
Sbjct: 124 RARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQV 183
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 184 EFLSMKLEAI 193
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L+ELVP C+K +AS LD+ +NYV++L+ Q+
Sbjct: 133 RARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQV 192
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 193 EFLSMKLAA 201
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 170 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 229
Query: 128 EMMSAQ 133
E +S +
Sbjct: 230 EFLSMK 235
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 270 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 329
Query: 128 EMMSAQ 133
E +S +
Sbjct: 330 EFLSMK 335
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 128 EMMS 131
E +S
Sbjct: 265 EFLS 268
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 266 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 325
Query: 128 EMMSAQ 133
E +S +
Sbjct: 326 EFLSMK 331
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP CNK S A VLD +N+V++L++++
Sbjct: 193 RVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNEV 252
Query: 128 EMMSAQGGAI 137
E++S + A+
Sbjct: 253 EILSMKLAAV 262
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 201 RVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQV 260
Query: 128 EMMSAQGGAI 137
E++S + A+
Sbjct: 261 EILSMKLAAV 270
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 205 RARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 264
Query: 128 EMMS 131
E +S
Sbjct: 265 EFLS 268
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR RI++R+K L+ LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 248 RARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQV 307
Query: 128 EMMS 131
E +S
Sbjct: 308 EFLS 311
>gi|168002647|ref|XP_001754025.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695001|gb|EDQ81347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 576
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 42 SHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSL 97
H + DV + E S +E KP R ++ + H Q+ER+RR+++N++ +L
Sbjct: 368 CHESEADVSVKENVVESSTNLEPKPRKRGRKPANDREEPLNHVQAERQRREKLNQKFYAL 427
Query: 98 KELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSG 147
+ +VPN +K D+AS+L+DA+ Y+ L+ +L+ A+ +FQ ++ +G
Sbjct: 428 RSVVPNVSKMDKASLLEDAITYINELQEKLQKAEAE-LKVFQRQVLASTG 476
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 207 RVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQV 266
Query: 128 EMMSAQGGAI 137
E++S + A+
Sbjct: 267 EILSMKLAAV 276
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 143 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 202
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 203 EFLSMKLEAV 212
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 155 RAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 214
Query: 128 EMMSAQGGAI 137
E +S + AI
Sbjct: 215 EFLSMKLSAI 224
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 264 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 323
Query: 128 EMMSAQ 133
E +S +
Sbjct: 324 EFLSMK 329
>gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 175
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 39/45 (86%)
Query: 87 RDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
R+RIN+R+K+L+EL+P C K+D+ S+L+D + YVK+L+ Q++MMS
Sbjct: 1 RERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMS 45
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR++IN+R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 629 RAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQV 688
Query: 128 EMMSAQGGAI 137
E +S + I
Sbjct: 689 EFLSMKLSTI 698
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 175 RARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 234
Query: 128 EMMS 131
E +S
Sbjct: 235 EFLS 238
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L+ LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 112 RARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQV 171
Query: 128 EMMSAQ 133
E +S +
Sbjct: 172 EFLSMK 177
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 241 RARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 300
Query: 128 EMMSAQ 133
E +S +
Sbjct: 301 EFLSMK 306
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 192 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQV 251
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 252 EFLSMKLATV 261
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L+ LVP+CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 259 RARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQV 318
Query: 128 EMMS 131
E +S
Sbjct: 319 EFLS 322
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 154 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 213
Query: 128 EMMS 131
E +S
Sbjct: 214 EFLS 217
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 131 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 190
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 191 EFLSMKLEAV 200
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 192 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQV 251
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 252 EFLSMKLATV 261
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 175 RARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 234
Query: 128 EMMS 131
E +S
Sbjct: 235 EFLS 238
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NYV+ L+ Q+
Sbjct: 186 RARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQV 245
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 246 EFLSMKLAVL 255
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A VLD+ +NYV++L++Q+
Sbjct: 122 RARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQV 181
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEV 153
E +S + ++ SP + G +T+
Sbjct: 182 EFLSMKIASL--SPVLYGFGMDTTDA 205
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 168 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQV 227
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 228 EFLSMKLATV 237
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 373 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 432
Query: 128 EMMS 131
E +S
Sbjct: 433 EFLS 436
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NYV+ L+ Q+
Sbjct: 169 RARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQV 228
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 229 EFLSMKLAVL 238
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 373 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 432
Query: 128 EMMS 131
E +S
Sbjct: 433 EFLS 436
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 197 EFLSMKLEAV 206
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K+L++LVP CNK +A VLD+ +NY+++L+ Q
Sbjct: 134 RARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQA 193
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 194 EFLSMKLEAV 203
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NYV+ L+ Q+
Sbjct: 186 RARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQV 245
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 246 EFLSMKLAVL 255
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A VLD+ +NYV++L++Q+
Sbjct: 112 RARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQV 171
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEV 153
E +S + ++ SP + G +T+
Sbjct: 172 EFLSMKIASL--SPVLYGFGMDTTDA 195
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 152 RARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 211
Query: 128 EMMS 131
E +S
Sbjct: 212 EFLS 215
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C K S A VLD+ +N+V+ L+ Q+
Sbjct: 174 RVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQV 233
Query: 128 EMMSAQGGAI 137
E++S + A+
Sbjct: 234 EILSMKLAAV 243
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 197 EFLSMKLEAV 206
>gi|297848392|ref|XP_002892077.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337919|gb|EFH68336.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 591
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNK 106
+++DA + KP R +R + V H ++ER+RR+++N+R +L+ +VPN +K
Sbjct: 403 EWADAVGADDNGNNKPRKRGRRPANGRVEALNHVEAERQRREKLNQRFYALRSVVPNISK 462
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ L +L++M A+
Sbjct: 463 MDKASLLGDAVSYINELHAKLKVMEAE 489
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 197 EFLSMKLEAV 206
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NYV+ L+ Q+
Sbjct: 186 RARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQV 245
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 246 EFLSMKLAVL 255
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 208 EFLSMKLEAV 217
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR +I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 139 RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQV 198
Query: 128 EMMSAQ 133
E +S +
Sbjct: 199 EFLSMK 204
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 147 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 206
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 207 EFLSMKLEAV 216
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K+L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 34 RARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQV 93
Query: 128 EMMSAQGGAIFQSPFMSPSGHQ 149
E +S + A+ P + +Q
Sbjct: 94 EFLSMKLAAV--KPALYTDAYQ 113
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 186 RARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQV 245
Query: 128 EMMS 131
E +S
Sbjct: 246 EFLS 249
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A VLD+ +NYV++L++Q+
Sbjct: 121 RARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQV 180
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEV 153
E +S + ++ SP + G +T+
Sbjct: 181 EFLSMKIASL--SPVLYGFGMDTTDA 204
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K VLD+ +N+V+ L+ Q+
Sbjct: 186 RARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQRQV 245
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 246 EMLSMRLAAV 255
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 387 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 446
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 447 EFLSMKLASV 456
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+K++K L+++VP CNK + +A +LD+ +NYV+ L+ Q+
Sbjct: 186 RARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQV 245
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 246 EFLSMKLAVL 255
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 86 RRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MSAQGGAIFQSPFM 143
RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++ MS GGA +P +
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLV 310
Query: 144 S 144
+
Sbjct: 311 A 311
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 86 RRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MSAQGGAIFQSPFM 143
RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++ MS GGA +P +
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLV 311
Query: 144 S 144
+
Sbjct: 312 A 312
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 152 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 211
Query: 128 EMMS 131
E +S
Sbjct: 212 EFLS 215
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ SER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 106 RARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQV 165
Query: 128 EMMS 131
E +S
Sbjct: 166 EFLS 169
>gi|242090023|ref|XP_002440844.1| hypothetical protein SORBIDRAFT_09g008120 [Sorghum bicolor]
gi|241946129|gb|EES19274.1| hypothetical protein SORBIDRAFT_09g008120 [Sorghum bicolor]
Length = 587
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 63 ERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKA 122
ERKP N R H ++ER+RR+++NKR +L+ +VPN +K D+AS+L+DAV ++
Sbjct: 428 ERKPTN--GREEPPLSHVEAERQRREKLNKRFCALRAIVPNISKMDKASILEDAVMHIGD 485
Query: 123 LRHQLEMMSAQ 133
L+ +LE + A+
Sbjct: 486 LKKKLEKLEAE 496
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 205 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 264
Query: 128 EMMSAQ 133
E +S +
Sbjct: 265 EFLSMK 270
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K A VLD+ +N+V++L+ Q+
Sbjct: 34 RARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQV 93
Query: 128 EMMSAQGGAI 137
EM+S + A+
Sbjct: 94 EMLSMRLAAV 103
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 144 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 203
Query: 128 EMMS 131
E +S
Sbjct: 204 EFLS 207
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 80 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 139
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 140 EFLSMKLATV 149
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 291 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQV 350
Query: 128 EMMS 131
E +S
Sbjct: 351 EFLS 354
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 86 RRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM--MSAQGGAIFQSPFM 143
RR+RI +R+K+L+ELVPN NK+D+AS+LD+ ++YVK L+ Q+++ MS GGA +P +
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLV 311
Query: 144 S 144
+
Sbjct: 312 A 312
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R++ LKELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 181 RARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQV 240
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 241 EYLSMRLAAV 250
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + HN +ER RR +IN++L+ L+ +VP C K+ A +LD+ +NYV++L+HQ+
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 212 EFLSLELTA 220
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L+ LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 82 RARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQV 141
Query: 128 EMMSAQ 133
E +S +
Sbjct: 142 EFLSMK 147
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 386 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 445
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 446 EFLSMKLASV 455
>gi|293332391|ref|NP_001168665.1| uncharacterized protein LOC100382453 [Zea mays]
gi|223950025|gb|ACN29096.1| unknown [Zea mays]
gi|414877116|tpg|DAA54247.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 398
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 36/40 (90%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRA 110
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK R+
Sbjct: 354 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVRRS 393
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 144 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 203
Query: 128 EMMSAQ 133
E +S +
Sbjct: 204 EFLSMK 209
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 147 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 206
Query: 128 EMMSAQ 133
E +S +
Sbjct: 207 EFLSMK 212
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 207 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 266
Query: 128 EMMSAQ 133
E +S +
Sbjct: 267 EFLSMK 272
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+ L++LVP C+K + +A VL++ +NYV++L+HQ+
Sbjct: 120 RARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQV 179
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 180 EFLSMKLASV 189
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Query: 65 KPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYV 120
KPD R +R + + H+ +ER RR++I++R+K L++L P CNK +A VLD+ +NY+
Sbjct: 108 KPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYI 167
Query: 121 KALRHQLEMMSAQGGAI 137
++L+ Q+E +S + A+
Sbjct: 168 QSLQRQVEFLSMKLEAV 184
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD +NYV++L+ Q+
Sbjct: 100 RARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQV 159
Query: 128 EMMSAQGGAIFQSPFMSPS 146
E +S + A+ M P+
Sbjct: 160 EFLSMKLEAVSSRLSMKPT 178
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R++ LKELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 108 RARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQV 167
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 168 EYLSMRLAAV 177
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 303 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 362
Query: 128 EMMS 131
E +S
Sbjct: 363 EFLS 366
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 64/101 (63%), Gaps = 8/101 (7%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K+L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 149 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 208
Query: 128 EMMS---AQGGAIFQSPFMSPSGH----QSTEVPQISPNVP 161
E +S A IF M G ++T + I+P +P
Sbjct: 209 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLP 249
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 243 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 302
Query: 128 EMMSAQ 133
E +S +
Sbjct: 303 EFLSMK 308
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+++VP CNK + +A VLD+ +NY+++L+ Q+
Sbjct: 142 RARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQV 201
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 202 EFLSMKLEAV 211
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 28 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 87
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 88 EFLSMKMATV 97
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 319 EFLSMKLSSV 328
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 128 EMMS 131
E +S
Sbjct: 364 EFLS 367
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 300 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 359
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 360 EFLSMKLSSV 369
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 64/101 (63%), Gaps = 8/101 (7%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K+L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 240
Query: 128 EMMS---AQGGAIFQSPFMSPSGH----QSTEVPQISPNVP 161
E +S A IF M G ++T + I+P +P
Sbjct: 241 EFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPTLP 281
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 319 EFLSMKLSSV 328
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR +I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 139 RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQV 198
Query: 128 EMMS 131
E +S
Sbjct: 199 EFLS 202
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 347 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 406
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 407 EFLSMKLATV 416
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 157 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 216
Query: 128 EMMS 131
E +S
Sbjct: 217 EFLS 220
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 152 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 211
Query: 128 EMMSAQ 133
E +S +
Sbjct: 212 EFLSMK 217
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP+CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 33 RARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQV 92
Query: 128 EMMS 131
E +S
Sbjct: 93 EFLS 96
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 373 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 432
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 433 EFLSMKLASV 442
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 264 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 323
Query: 128 EMMS 131
E +S
Sbjct: 324 EFLS 327
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 152 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 211
Query: 128 EMMS 131
E +S
Sbjct: 212 EFLS 215
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 253 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 312
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 313 EFLSMKLSSV 322
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 128 EMMS 131
E +S
Sbjct: 364 EFLS 367
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 302 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 361
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 362 EFLSMKLSSV 371
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 359 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 418
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 419 EFLSMKLASV 428
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 164 RARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 223
Query: 128 EMMSAQ 133
E +S +
Sbjct: 224 EFLSMK 229
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 306 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQV 365
Query: 128 EMMSAQ 133
E +S +
Sbjct: 366 EFLSMK 371
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 151 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQV 210
Query: 128 EMMS 131
E +S
Sbjct: 211 EFLS 214
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 351 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 410
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 411 EFLSMKLASV 420
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R++ LKELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 194 RARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQV 253
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 254 EYLSMRLAAV 263
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 12/108 (11%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK---SDRASVLDDAVNYVKALRH 125
R +R + + H+ +ER RR++IN R+K L+ELVP C+K S A VLD +N+V++L+
Sbjct: 33 RARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQSLQR 92
Query: 126 QLEMMSAQGGAIFQSPFMSPSGHQ---STEVPQISPNVPISPKLGMGS 170
Q+E +S + A+ +P + SG S+E +++ S ++GMG+
Sbjct: 93 QVEFLSMRLAAV--TPRIDFSGLDNILSSECGRLTS----SNRIGMGT 134
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 128 EMMSAQ 133
E +S +
Sbjct: 364 EFLSMK 369
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 265 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 324
Query: 128 EMMS 131
E +S
Sbjct: 325 EFLS 328
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 126 RARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQV 185
Query: 128 EMMS 131
E +S
Sbjct: 186 EFLS 189
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 157 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 216
Query: 128 EMMSAQ 133
E +S +
Sbjct: 217 EFLSMK 222
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 144 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 203
Query: 128 EMMS 131
E +S
Sbjct: 204 EFLS 207
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 265 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 324
Query: 128 EMMS 131
E +S
Sbjct: 325 EFLS 328
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 75 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 134
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 135 EFLSMKLEAV 144
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 172 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 231
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 232 EFLSMKLEAV 241
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 157 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 216
Query: 128 EMMS 131
E +S
Sbjct: 217 EFLS 220
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 370 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 429
Query: 128 EMMSAQ 133
E +S +
Sbjct: 430 EFLSMK 435
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 302 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 361
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 362 EFLSMKLSSV 371
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 152 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 211
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 212 EFLSMKLEAV 221
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 319 EFLSMKLSSV 328
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+++VP CNK +ASVLD+ +NY+++L+ Q+
Sbjct: 51 RARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQV 110
Query: 128 EMMS 131
E +S
Sbjct: 111 EFLS 114
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R++ LKELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 147 RARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQV 206
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 207 EYLSMRLAAV 216
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 292 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 351
Query: 128 EMMSAQ 133
E +S +
Sbjct: 352 EFLSMK 357
>gi|223946943|gb|ACN27555.1| unknown [Zea mays]
Length = 386
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 34/36 (94%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK 106
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK 384
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 159 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 218
Query: 128 EMMSAQ 133
E +S +
Sbjct: 219 EFLSMK 224
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 39 HQTSHSLDTDVDDFSDATEISEGMERKPDN-------------RPKRTHSAEVHNQSERR 85
QT S T+ + + IS M+ K D+ R KR + H+ +ER
Sbjct: 104 QQTEVSSQTERNSLEENRTISPKMQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERL 163
Query: 86 RRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLEMMSAQ 133
RR +I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+E +S +
Sbjct: 164 RRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMK 212
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 340 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 399
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 400 EFLSMKLASV 409
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 48 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 107
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 108 EFLSMKLEAV 117
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 54 DATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVL 113
D I + R KR + + + R RR++IN+RLK+L+ LVPN K D ++L
Sbjct: 428 DIIVIGPALNTNGKPRAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTML 487
Query: 114 DDAVNYVKALRHQLEMMSAQGGAIFQSP 141
D+A++YVK L+ Q+E++ + +F +P
Sbjct: 488 DEAIHYVKFLQTQVELLKSDEFWMFANP 515
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 158 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 217
Query: 128 EMMS 131
E +S
Sbjct: 218 EFLS 221
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 65 KPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYV 120
KPD R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV
Sbjct: 123 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYV 182
Query: 121 KALRHQLEMMS 131
++L+ Q+E +S
Sbjct: 183 QSLQRQVEFLS 193
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 145 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 204
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 205 EFLSMKLEAV 214
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 41/47 (87%)
Query: 85 RRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
+RRD+IN+R+K+L++LVPN +K+D+AS+LD+ + Y+K L+ Q+ MMS
Sbjct: 154 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 200
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 158 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 217
Query: 128 EMMS 131
E +S
Sbjct: 218 EFLS 221
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 83 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 142
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 143 EFLSMKLEAV 152
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 155 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 214
Query: 128 EMMS 131
E +S
Sbjct: 215 EFLS 218
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Query: 64 RKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNY 119
+KPD R +R + + H+ +ER RR++I+K++K L+++VP C K + +A +LD+ +NY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINY 193
Query: 120 VKALRHQLEMMSAQ 133
V++L+ Q+E +S +
Sbjct: 194 VQSLQQQVEFLSMK 207
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 173 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 232
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMV 177
E +S + + P + EV V SP++ + SG MV
Sbjct: 233 EFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVL-SGYSHEMV 281
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 173 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 232
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMV 177
E +S + + P + EV V SP++ + SG MV
Sbjct: 233 EFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVL-SGYSHEMV 281
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 173 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 232
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMV 177
E +S + + P + EV V SP++ + SG MV
Sbjct: 233 EFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVL-SGYSHEMV 281
>gi|168041399|ref|XP_001773179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675538|gb|EDQ62032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRA 110
D SD ++ E E K R R H ++ + +ER+RR ++N+RL SL+ LVP K DRA
Sbjct: 290 DSSDCSDPMEDDEEKGGPRSARRHLSK-NLVAERKRRKKLNERLYSLRALVPKITKMDRA 348
Query: 111 SVLDDAVNYVKALRHQLE 128
S+L DA+ YVK L+ Q++
Sbjct: 349 SILGDAIEYVKELQQQVK 366
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+KR+ +L+ LVP C+K + +A VLD+ +NYV++L++Q+
Sbjct: 139 RARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQV 198
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 199 EFLSMKLASV 208
>gi|357441955|ref|XP_003591255.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480303|gb|AES61506.1| Transcription factor PIF3 [Medicago truncatula]
Length = 555
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 34/36 (94%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK 106
KR+ +AEVHN SERRRRDRIN+++++L+EL+PNCNK
Sbjct: 465 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK 500
>gi|224072329|ref|XP_002303693.1| predicted protein [Populus trichocarpa]
gi|222841125|gb|EEE78672.1| predicted protein [Populus trichocarpa]
Length = 465
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+K +P S H ++ER+RR+R+N R +L+ +VPN +K DRAS+L DAVNY+K L
Sbjct: 275 KKRGRKPGGKESPLNHVEAERQRRERLNHRFYALRSVVPNVSKMDRASLLADAVNYIKEL 334
Query: 124 RHQLEMMSA 132
+ ++ + A
Sbjct: 335 KRKVNELEA 343
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 173 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 232
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPKLGMGSGIGTGMV 177
E +S + + P + EV V SP++ + SG MV
Sbjct: 233 EFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVL-SGYSHEMV 281
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 158 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 217
Query: 128 EMMS 131
E +S
Sbjct: 218 EFLS 221
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 59 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 118
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 119 EFLSMKLAAV 128
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 17/93 (18%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK------SDRASVLDDAVNYVKA 122
R +R + + H+ +ER RR+RI +R+K+L+ELVPN NK +D+AS+LD+ ++YVK
Sbjct: 286 RARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKF 345
Query: 123 LRHQLEM-----------MSAQGGAIFQSPFMS 144
L+ Q+++ MS GGA +P ++
Sbjct: 346 LQLQVKVFLTVVVVQVLSMSRLGGAAAVAPLVA 378
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 158 RARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQV 217
Query: 128 EMMS 131
E +S
Sbjct: 218 EFLS 221
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R++ LKELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 81 RARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQV 140
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 141 EYLSMRLAAV 150
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 253 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 312
Query: 128 EMMS 131
E +S
Sbjct: 313 EFLS 316
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 278 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 337
Query: 128 EMMS 131
E +S
Sbjct: 338 EFLS 341
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RLK L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 148 RARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV 207
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 208 EFLSMKLTA 216
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 112 RARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQV 171
Query: 128 EMMS 131
E +S
Sbjct: 172 EFLS 175
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 370 RARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQV 429
Query: 128 EMMSAQ 133
E +S +
Sbjct: 430 EFLSMK 435
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 129 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 188
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 189 EFLSMKLEAV 198
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A VLD+ +NYV++L++Q+
Sbjct: 132 RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQV 191
Query: 128 EMMS 131
E +S
Sbjct: 192 EFLS 195
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R KR + + + R RR++IN+RLK+L+ LVPN + D ++L++A+++VK L QLE
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQLE 530
Query: 129 MMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVP 161
++ + +F PF+ + ++ P+VP
Sbjct: 531 LLRSDDRWMFADPFI----YNGMDITGSYPHVP 559
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 326 RARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQV 385
Query: 128 EMMSAQ 133
E +S +
Sbjct: 386 EFLSMK 391
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 170 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 229
Query: 128 EMMSAQGGAIFQSP 141
E +S + + P
Sbjct: 230 EFLSMKLAVVNPRP 243
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RLK L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 148 RARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV 207
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 208 EFLSMKLTA 216
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 253 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 312
Query: 128 EMMS 131
E +S
Sbjct: 313 EFLS 316
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 112 RARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQV 171
Query: 128 EMMS 131
E +S
Sbjct: 172 EFLS 175
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 39 HQTSHSLDTDVDDFSDATEISEGMERKPDN-------------RPKRTHSAEVHNQSERR 85
QT S T+ + + IS M+ K D+ R KR + H+ +ER
Sbjct: 98 QQTEVSSQTERNSLEENRTISPKMQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERL 157
Query: 86 RRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLEMMSAQ 133
RR +I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+E +S +
Sbjct: 158 RRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMK 206
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 123 RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQV 182
Query: 128 EMMS 131
E +S
Sbjct: 183 EFLS 186
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 281 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 340
Query: 128 EMMS 131
E +S
Sbjct: 341 EFLS 344
>gi|18378953|ref|NP_563650.1| transcription factor HFR1 [Arabidopsis thaliana]
gi|20532238|sp|Q9FE22.1|HFR1_ARATH RecName: Full=Transcription factor HFR1; AltName: Full=Basic
helix-loop-helix protein 26; Short=AtbHLH26; Short=bHLH
26; AltName: Full=Protein LONG HYPOCOTYL IN FAR-RED 1;
AltName: Full=Protein REDUCED PHYTOCHROME SIGNALING;
AltName: Full=Reduced sensitivity to far-red light;
AltName: Full=Transcription factor EN 68; AltName:
Full=bHLH transcription factor bHLH026
gi|11870115|gb|AAG40617.1|AF324245_1 bHLH-like protein HFR1 [Arabidopsis thaliana]
gi|12025106|gb|AAG45733.1|AF288287_1 reduced phytochrome signaling 1 [Arabidopsis thaliana]
gi|13183644|gb|AAK15282.1|AF323182_1 basic helix-loop-helix FBI1 protein [Arabidopsis thaliana]
gi|332189297|gb|AEE27418.1| transcription factor HFR1 [Arabidopsis thaliana]
Length = 292
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 5/66 (7%)
Query: 82 SERRRRD-RINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQS 140
S+RRRRD +++ +++ L++LVPNC+K+D+ SVLD + Y+K L+ QL+MMS G +
Sbjct: 141 SKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMSTVG----VN 196
Query: 141 PFMSPS 146
P+ P+
Sbjct: 197 PYFLPA 202
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 281 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 340
Query: 128 EMMS 131
E +S
Sbjct: 341 EFLS 344
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ LK++VP C K+ A +LD+ +NYV++L++Q+
Sbjct: 149 RARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQV 208
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 209 EFLSMKLAA 217
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R+K L+ELVP C+K S A VLD+ +N+V++L+ ++
Sbjct: 8 RARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQREV 67
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 68 EFLSMRLAAV 77
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RLK L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 137 RARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV 196
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 197 EFLSMKLTA 205
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%)
Query: 76 AEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
AE H +E+RRR RIN++ K L+ LVP C+K ++S LD ++Y+K+L+ QL+ M
Sbjct: 154 AETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTIHYMKSLQQQLQAM 208
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 257 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 316
Query: 128 EMMS 131
E +S
Sbjct: 317 EFLS 320
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 74 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQI 133
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 134 EFLSMKLAAV 143
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C++ + +A VLD+ +NYV++L++Q+
Sbjct: 146 RARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQV 205
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 206 EFLSMKLASV 215
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ELVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 147 RARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQV 206
Query: 128 EM 129
E+
Sbjct: 207 EV 208
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 249 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 308
Query: 128 EMMS 131
E +S
Sbjct: 309 EFLS 312
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++L+P CNK +A VLD+ +NY+++L+ Q+
Sbjct: 141 RARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQV 200
Query: 128 EMMSAQ 133
E +S +
Sbjct: 201 EFLSMK 206
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 110 RARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQV 169
Query: 128 EMMS 131
E +S
Sbjct: 170 EFLS 173
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 50 DDFSDATEISE--GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS 107
DD S+A++ S G+ K R R S + + R+RR+RIN+RLK+L+ LVPN K
Sbjct: 195 DDDSNASQESADTGVCPKGKARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKV 254
Query: 108 DRASVLDDAVNYVKALRHQLEMMSA 132
D +++L++AV+YVK L+ Q++++S+
Sbjct: 255 DMSTMLEEAVHYVKFLQLQIKVLSS 279
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 249 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 308
Query: 128 EMMS 131
E +S
Sbjct: 309 EFLS 312
>gi|12957703|gb|AAK09221.1|AC084320_8 putative phytochrome interacting factor [Oryza sativa Japonica
Group]
Length = 263
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK 106
D +ATE ++ R+ ++ +RT +AEVHN SERRRRDRIN+++++L+EL+P+CNK
Sbjct: 197 DAECEATEETKSSSRRYGSK-RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK 252
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++IN R++ LKELVP C+K S A VLD+ +N+V++L+ Q+
Sbjct: 158 RARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQV 217
Query: 128 EMMS 131
E +S
Sbjct: 218 EYLS 221
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 140 RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQV 199
Query: 128 EMMS 131
E +S
Sbjct: 200 EFLS 203
>gi|89274228|gb|ABD65632.1| basic helix-loop-helix (bHLH) family transcription factor [Brassica
oleracea]
Length = 586
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 10 GDSEKGQ----SSRNENSFDFLESSASQLPTSWHQTSHS-LDTDVDDFSDATEISEGMER 64
GDS K + S + E F +S LPT + ++ S L+ V +++ I E+
Sbjct: 340 GDSNKKKRCLVSDKEEEMLSF--TSVLPLPTKSNDSNRSDLEASVVKEAESGRIVAETEK 397
Query: 65 KPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
KP R ++ + H ++ER+RR+++N+R SL+ +VPN +K D+AS+L DA++Y+
Sbjct: 398 KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI 457
Query: 121 KALRHQLEMMSA 132
L+ +L+ A
Sbjct: 458 NELKAKLQKAEA 469
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+++VP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 138 RARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQV 197
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 198 EFLSMKLEAV 207
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 271 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 330
Query: 128 EMMS 131
E +S
Sbjct: 331 EFLS 334
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 108 RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQV 167
Query: 128 EMMS 131
E +S
Sbjct: 168 EFLS 171
>gi|20127009|gb|AAM10932.1|AF488559_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 590
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNK 106
+++DA E +P R +R + H ++ER+RR+++N+R +L+ +VPN +K
Sbjct: 402 EWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISK 461
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ L +L++M A+
Sbjct: 462 MDKASLLGDAVSYINELHAKLKVMEAE 488
>gi|15223363|ref|NP_171634.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|145323702|ref|NP_001077440.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|334182212|ref|NP_001184883.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|75311402|sp|Q9LNJ5.1|BH013_ARATH RecName: Full=Transcription factor bHLH13; AltName: Full=Basic
helix-loop-helix protein 13; Short=AtbHLH13; Short=bHLH
13; AltName: Full=Transcription factor EN 39; AltName:
Full=bHLH transcription factor bHLH013
gi|9665138|gb|AAF97322.1|AC023628_3 Similar to transcription factors [Arabidopsis thaliana]
gi|18026974|gb|AAL55720.1|AF251698_1 putative transcription factor BHLH13 [Arabidopsis thaliana]
gi|19310467|gb|AAL84968.1| At1g01260/F6F3_25 [Arabidopsis thaliana]
gi|21539515|gb|AAM53310.1| transcription factor MYC7E, putative [Arabidopsis thaliana]
gi|28416465|gb|AAO42763.1| At1g01260/F6F3_25 [Arabidopsis thaliana]
gi|332189141|gb|AEE27262.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|332189142|gb|AEE27263.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|332189143|gb|AEE27264.1| transcription factor bHLH13 [Arabidopsis thaliana]
Length = 590
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNK 106
+++DA E +P R +R + H ++ER+RR+++N+R +L+ +VPN +K
Sbjct: 402 EWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISK 461
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ L +L++M A+
Sbjct: 462 MDKASLLGDAVSYINELHAKLKVMEAE 488
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCN-KSDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP C+ K+ +A +LD+ +NYV++L+ Q+
Sbjct: 232 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQV 291
Query: 128 EMMSAQ 133
E +S +
Sbjct: 292 EFLSMK 297
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 140 RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQV 199
Query: 128 EMMS 131
E +S
Sbjct: 200 EFLS 203
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 77 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 136
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 137 EFLSMKLAAV 146
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 1029 RARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQV 1088
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 1089 EFLSMKLNA 1097
>gi|222424906|dbj|BAH20404.1| AT1G01260 [Arabidopsis thaliana]
Length = 427
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNK 106
+++DA E +P R +R + H ++ER+RR+++N+R +L+ +VPN +K
Sbjct: 239 EWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISK 298
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ L +L++M A+
Sbjct: 299 MDKASLLGDAVSYINELHAKLKVMEAE 325
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 242 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 301
Query: 128 EMMS 131
E +S
Sbjct: 302 EFLS 305
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 254 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 313
Query: 128 EMMS 131
E +S
Sbjct: 314 EFLS 317
>gi|224082760|ref|XP_002306828.1| predicted protein [Populus trichocarpa]
gi|222856277|gb|EEE93824.1| predicted protein [Populus trichocarpa]
Length = 466
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 9/107 (8%)
Query: 35 PTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRI 90
P + S D DD S +G ERKP R ++ + H ++ER+RR+++
Sbjct: 279 PYTMQAMSTDQDYPKDDLS-----PQGDERKPRKRGRKPANGREEPLNHVEAERQRREKL 333
Query: 91 NKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
N+R +L+ +VPN +K D+AS+L DA+ ++ L+ ++ ++ + G +
Sbjct: 334 NQRFYALRAVVPNISKMDKASLLGDAITFITDLQKKIRVLETERGVV 380
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 408 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 467
Query: 128 EMMSAQ 133
E +S +
Sbjct: 468 EFLSMK 473
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 258 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 317
Query: 128 EMMS 131
E +S
Sbjct: 318 EFLS 321
>gi|242063834|ref|XP_002453206.1| hypothetical protein SORBIDRAFT_04g001650 [Sorghum bicolor]
gi|241933037|gb|EES06182.1| hypothetical protein SORBIDRAFT_04g001650 [Sorghum bicolor]
Length = 448
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS------AQGG 135
+ERRRR ++N RL L+ LVPN +K DRAS+L DA++Y+ L++Q++ + A GG
Sbjct: 189 AERRRRKKLNDRLYKLRSLVPNISKMDRASILGDAIDYIVGLQNQVKALQDELEDPADGG 248
Query: 136 A----IFQSPFMSPSGHQSTEVPQISPNVPIS 163
A + P S G ++ + P+ S ++P++
Sbjct: 249 APDVLLDHPPPASLVGLENDDSPRTSHHLPLA 280
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 14/111 (12%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+ L++LVP CNK +A VLD+ +NY+++L+ Q+
Sbjct: 85 RARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQV 144
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISPK-LGMGSGIGTGMV 177
E +S + A+ SP+ + PK LG + TGM+
Sbjct: 145 EFLSMKLEAVNSRMNTSPTTEH------------LHPKDLGAQPFVATGMI 183
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 257 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 316
Query: 128 EMMS 131
E +S
Sbjct: 317 EFLS 320
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 70 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQI 129
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 130 EFLSMKLAAV 139
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 372 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 431
Query: 128 EMMSAQ 133
E +S +
Sbjct: 432 EFLSMK 437
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 442 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 501
Query: 128 EMMSAQGGAIFQSP 141
E +S + ++ P
Sbjct: 502 ENLSMKLASVNPGP 515
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 247 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 306
Query: 128 EMMS 131
E +S
Sbjct: 307 EFLS 310
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 52 FSDATEISEGMERKPDNRPKRTH---SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSD 108
F A+++ +E +RPKR + S + + + R RR+RI+ R++ L+ LVP K D
Sbjct: 344 FRQASQLIPTLEDIASSRPKRRNVRISIDTQSVAARHRRERISDRIRVLQRLVPGGTKMD 403
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQG 134
AS+LD+A++Y+K L+ QL+ + G
Sbjct: 404 TASMLDEAIHYIKFLKQQLQTLEQLG 429
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 124 RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQV 183
Query: 128 EMMS 131
E +S
Sbjct: 184 EFLS 187
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 224 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 283
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 284 EFLSMKLSAV 293
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C KS A++LD+ +NYV++L++Q+
Sbjct: 149 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQV 208
Query: 128 EMMSAQGGA 136
E++S + A
Sbjct: 209 ELLSMKLTA 217
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 242 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 301
Query: 128 EMMS 131
E +S
Sbjct: 302 EFLS 305
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+EL P CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 207 RARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQV 266
Query: 128 EMMS 131
E +S
Sbjct: 267 EFLS 270
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 77 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQI 136
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 137 EFLSMKLAAV 146
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 63 ERKPDN----RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAV 117
++KP+ R KR + + H+ +ER RR +IN++L+ L+ +VP C K+ A +LD+ +
Sbjct: 124 DKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEII 183
Query: 118 NYVKALRHQLEMMSAQGGA 136
NYV++L+HQ+E +S + A
Sbjct: 184 NYVQSLQHQVEFLSMKLTA 202
>gi|224066289|ref|XP_002302066.1| predicted protein [Populus trichocarpa]
gi|222843792|gb|EEE81339.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 17 SSRNENSFDFLESSASQLPTSWHQTSH---SLDTDVDDFSDATEISEGMERKPDNRPKRT 73
S + E+ F S + TS +Q L+ DD S +G ERKP R ++
Sbjct: 265 SPKVEDELVFTSESYAMKATSTNQVYGMVGGLEQPNDDLS-----PQGDERKPRKRGRKP 319
Query: 74 HSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM 129
+ H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ ++
Sbjct: 320 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKIGA 379
Query: 130 MSAQGGAI 137
+ + G +
Sbjct: 380 LETERGVV 387
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I ++K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 178 RARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQV 237
Query: 128 EMMS 131
E +S
Sbjct: 238 EFLS 241
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR +I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 139 RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQV 198
Query: 128 EMMSAQ 133
E +S +
Sbjct: 199 EFLSMK 204
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 63 ERKPDN----RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAV 117
++KP+ R KR + + H+ +ER RR +IN++L+ L+ +VP C K+ A +LD+ +
Sbjct: 118 DKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEII 177
Query: 118 NYVKALRHQLEMMSAQGGA 136
NYV++L+HQ+E +S + A
Sbjct: 178 NYVQSLQHQVEFLSMKLNA 196
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 370 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 429
Query: 128 EMMSAQ 133
E +S +
Sbjct: 430 EFLSMK 435
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 630 RARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 689
Query: 128 EMMS 131
E +S
Sbjct: 690 EFLS 693
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR +I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 107 RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQV 166
Query: 128 EMMSAQ 133
E +S +
Sbjct: 167 EFLSMK 172
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RLK L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 150 RARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV 209
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 210 EFLSMKLTA 218
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 280 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 339
Query: 128 EMMS 131
E +S
Sbjct: 340 EFLS 343
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+ L++LVP CN+ + +A +LD+ +NYV++L+ Q+
Sbjct: 192 RARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQV 251
Query: 128 EMMSAQGGAIFQSPFMSPSGHQSTEVPQISP 158
E +S + + +P M + + S I P
Sbjct: 252 EFLSMKLATV--NPRMEFNANASLSTEMIQP 280
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLEM 129
+R + + H+ +ER RR++IN R++ LKELVP C+K S A VLD+ +N+V++L+ Q+E
Sbjct: 2 RRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEY 61
Query: 130 MSAQGGAI 137
+S + A+
Sbjct: 62 LSMRLAAV 69
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI +R+K L++LVP CNK +A LD+ +NY+++L+ Q+
Sbjct: 144 RSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQV 203
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 204 EFLSMKLEAV 213
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 57/84 (67%)
Query: 55 ATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLD 114
AT+ S +++ ++R + S + + +RRR+RIN+RL+ L++LVPN K D +++L+
Sbjct: 154 ATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLE 213
Query: 115 DAVNYVKALRHQLEMMSAQGGAIF 138
+AV YVK L+ Q++++S+ +F
Sbjct: 214 EAVQYVKFLQLQIKLLSSDDTWMF 237
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 57/84 (67%)
Query: 55 ATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLD 114
AT+ S +++ ++R + S + + +RRR+RIN+RL+ L++LVPN K D +++L+
Sbjct: 142 ATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLE 201
Query: 115 DAVNYVKALRHQLEMMSAQGGAIF 138
+AV YVK L+ Q++++S+ +F
Sbjct: 202 EAVQYVKFLQLQIKLLSSDDTWMF 225
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 259 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 318
Query: 128 EMMSAQ 133
E +S +
Sbjct: 319 EFLSMK 324
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 146 RARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQV 205
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 206 EFLSMKLTA 214
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 261 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 320
Query: 128 EMMS 131
E +S
Sbjct: 321 EFLS 324
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 261 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 320
Query: 128 EMMS 131
E +S
Sbjct: 321 EFLS 324
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 165 RARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQV 224
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 225 EFLSMKLASL 234
>gi|77556979|gb|ABA99775.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 387
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 85 RRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
RRR +I +R ++L+ LVP C+KS++AS LD + Y+K+L+HQL+ MS G
Sbjct: 225 RRRFKITERFRTLQRLVPGCDKSNQASTLDQTIQYMKSLQHQLKAMSVVG 274
>gi|297848442|ref|XP_002892102.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
gi|297337944|gb|EFH68361.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 43/53 (81%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
S+RRR D + ++++L++LVP+C+K+D+ SVLD+A+ Y+K+L+ Q ++MS G
Sbjct: 129 SKRRRSDELCNKMRTLQQLVPDCHKTDKVSVLDNAIEYMKSLQLQFKVMSMMG 181
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A++LD+ +NYV++L++Q+
Sbjct: 1040 RARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQV 1099
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 1100 EFLSMKLTA 1108
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 303 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 362
Query: 128 EMMSAQ 133
E +S +
Sbjct: 363 EFLSMK 368
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 175 RARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQV 234
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 235 EFLSMKLASV 244
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 136 RARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQV 195
Query: 128 EMMSAQGGAIFQSPFMSPSG 147
E +S + + SP + G
Sbjct: 196 EFLSMKLATV--SPMLYEFG 213
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN++LK L+ +VP C K+ A +LD+ +NYV++L+HQ+
Sbjct: 153 RARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQV 212
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 213 EFLSMKLTA 221
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 250 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 309
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 310 EFLSMKLASV 319
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + VLD+ +NYVK+L++Q+
Sbjct: 43 RARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQV 102
Query: 128 EMMSAQGGAIFQSPFMSPSGHQS 150
E + + +I SP + GH++
Sbjct: 103 EFLVGKLASI--SPML--IGHEA 121
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 172 RARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQV 231
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 232 EFLSMKLASV 241
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
G K +R R + + + R+RR+RIN+RLK+L+ LVPN K D +++L++AV+YV
Sbjct: 209 GATSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYV 268
Query: 121 KALRHQLEMMSA 132
K L+ Q++++S+
Sbjct: 269 KFLQLQIKLLSS 280
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+++L+ LVP C+K + +A +LD+ +NYV+ L++Q+
Sbjct: 138 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQV 197
Query: 128 EMMSAQGGAI 137
E +S + +I
Sbjct: 198 EFLSMKLTSI 207
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 254 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 313
Query: 128 EMMSAQ 133
E +S +
Sbjct: 314 EFLSMK 319
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR +I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 32 RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQV 91
Query: 128 EMMSAQ 133
E +S +
Sbjct: 92 EFLSMK 97
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 405 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 464
Query: 128 EMMSAQ 133
E +S +
Sbjct: 465 EFLSMK 470
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 173 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 232
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 233 EFLSMKLSAV 242
>gi|145334163|ref|NP_001078462.1| transcription factor bHLH119 [Arabidopsis thaliana]
gi|218563522|sp|Q8GT73.2|BH119_ARATH RecName: Full=Transcription factor bHLH119; AltName: Full=Basic
helix-loop-helix protein 119; Short=AtbHLH119;
Short=bHLH 119; AltName: Full=Transcription factor EN
104; AltName: Full=bHLH transcription factor bHLH119
gi|332660147|gb|AEE85547.1| transcription factor bHLH119 [Arabidopsis thaliana]
Length = 544
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 53/61 (86%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +A++HN SERRRR+RIN+R+K+L+EL+P C K+D+ S+L+D + YVK+L+ Q++MM
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMM 413
Query: 131 S 131
S
Sbjct: 414 S 414
>gi|242069235|ref|XP_002449894.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
gi|241935737|gb|EES08882.1| hypothetical protein SORBIDRAFT_05g025230 [Sorghum bicolor]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFM 143
+RRR+RIN+RL++L++L+PN K D +++L++AV YVK L+ Q++++S++ ++ +P
Sbjct: 167 KRRRERINERLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLLSSEDTWMY-APL- 224
Query: 144 SPSGHQSTEVPQ 155
H S +V Q
Sbjct: 225 -AYNHMSMDVSQ 235
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 169 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 228
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 229 EFLSMKLSAV 238
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN +L+ L++LVP C+KS A +L++ +NYV +L++Q+
Sbjct: 150 RAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQV 209
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 210 EFLSMELAA 218
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 75 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 134
Query: 128 EMMS 131
E +S
Sbjct: 135 EFLS 138
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 165 RARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 224
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 225 EFLSMKLASV 234
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 148 RARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 207
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 208 EFLSMKLASV 217
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 154 RARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQV 213
Query: 128 EMMSAQ 133
E +S +
Sbjct: 214 EFLSMK 219
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN++L+ L+ +VP C K+ A +LD+ +NYV++L+HQ+
Sbjct: 157 RARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQV 216
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 217 EFLSLKLTA 225
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 11/96 (11%)
Query: 37 SWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKS 96
+WH S+ + + D + R +R + + H+ +ER RR++I++R+K
Sbjct: 218 AWHDNSNGKEVAAEPSKDYIHV----------RARRGQATDSHSLAERVRREKISERMKL 267
Query: 97 LKELVPNCNK-SDRASVLDDAVNYVKALRHQLEMMS 131
L++LVP C+K + +A +LD+ +NYV++L+ Q+E +S
Sbjct: 268 LQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 303
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 257 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 316
Query: 128 EMMS 131
E +S
Sbjct: 317 EFLS 320
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + VLD+ +NYVK+L++Q+
Sbjct: 109 RARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQV 168
Query: 128 EMMSAQGGAIFQSPFMSPSGHQS 150
E + + +I SP + GH++
Sbjct: 169 EFLVGKLASI--SPML--IGHEA 187
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 369 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 428
Query: 128 EMMSAQ 133
E +S +
Sbjct: 429 EFLSMK 434
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN++L+ L+ +VP C K+ A +LD+ +NYV++L+HQ+
Sbjct: 158 RARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQV 217
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 218 EFLSLKLTA 226
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN+RLK L++LVP C K+ A +LD ++YV++L++Q+
Sbjct: 105 RAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQI 164
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 165 EFLSMKLSA 173
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R KR + H+ +ER RR +I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 148 RAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQV 207
Query: 128 EMMS 131
E +S
Sbjct: 208 EFLS 211
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 173 RARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 232
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 233 EFLSMKLASV 242
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 318 RARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 377
Query: 128 EMMSAQ 133
E +S +
Sbjct: 378 EFLSMK 383
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + VLD+ +NYVK+L++Q+
Sbjct: 109 RARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQV 168
Query: 128 EMMSAQGGAIFQSPFMSPSGHQS 150
E + + +I SP + GH++
Sbjct: 169 EFLVGKLASI--SPML--IGHEA 187
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN+RLK L++LVP C K+ A +LD ++YV++L++Q+
Sbjct: 105 RAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQI 164
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 165 EFLSMKLSA 173
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 173 RARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 232
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 233 EFLSMKLASV 242
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + VLD+ +NYVK+L++Q+
Sbjct: 109 RARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQV 168
Query: 128 EMMSAQGGAIFQSPFMSPSGHQS 150
E + + +I SP + GH++
Sbjct: 169 EFLVGKLASI--SPML--IGHEA 187
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 359 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 418
Query: 128 EMMSAQ 133
E +S +
Sbjct: 419 EFLSMK 424
>gi|79320892|ref|NP_001031251.1| transcription factor bHLH109 [Arabidopsis thaliana]
gi|52354201|gb|AAU44421.1| hypothetical protein AT1G68240 [Arabidopsis thaliana]
gi|332196650|gb|AEE34771.1| transcription factor bHLH109 [Arabidopsis thaliana]
Length = 174
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 16 QSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEIS--EGMERKPDNR---- 69
+++RNE + + + S S + S+ +HS + + T+ + E + +PD
Sbjct: 3 RNNRNEGTHEEEQCSLSDIIYSFCSENHSELNPLQEIFGVTKNNDHEKHDEEPDEESYRM 62
Query: 70 PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPN-CNKSDRASVLDDAVNYVKALRHQLE 128
KR S E E++RR I ++ L+ L+PN C K D AS L++ + Y+K+L++Q++
Sbjct: 63 AKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVD 122
Query: 129 MMSAQGGAIFQSPFMSPSGHQSTEVPQIS------PNVPISPKLGM 168
+MS A +P +P + + + P +S P VP+ P+ M
Sbjct: 123 VMSM---AYTTTPVYTPPFYAAAQAPCMSPWGYYTPGVPMMPQQNM 165
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+++L+ LVP C+K + +A +LD+ +NYV+ L+ Q+
Sbjct: 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQV 196
Query: 128 EMMSAQGGAI 137
E +S + +I
Sbjct: 197 EFLSMKLTSI 206
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 78 VHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
+HN ++ RR++IN R+K L+ELVP C+K A VLD+ +N+V+ L+ Q+EM+S + A
Sbjct: 147 IHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAA 206
Query: 137 I 137
+
Sbjct: 207 V 207
>gi|312283103|dbj|BAJ34417.1| unnamed protein product [Thellungiella halophila]
Length = 597
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNK 106
+++D E KP R +R + H ++ER+RR+++N+R +L+ +VPN +K
Sbjct: 409 EWADVVGGDESGNNKPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISK 468
Query: 107 SDRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ L +L++M A+
Sbjct: 469 MDKASLLGDAVSYINELHAKLKVMEAE 495
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R ++ + H+ +ER RR++I++R+K L++LVP C K + +A +LD+ +NYV++L+ Q+
Sbjct: 175 RARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQV 234
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 235 EFLSMKLAAV 244
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN+RLK L++LVP C K+ A +LD ++YV++L++Q+
Sbjct: 48 RAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQI 107
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 108 EFLSMKLSA 116
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 12/96 (12%)
Query: 63 ERKPDNRPKRT-HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYV 120
ER+ R +R+ ++ H+ +ER+RR +IN+ LK+L++LVP C+KS ++AS LD + Y+
Sbjct: 106 ERRKITRARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYM 165
Query: 121 KALRHQLEMMSAQGGAIFQS--------PFMSPSGH 148
K+L+ ++ MS G I + PF+ P +
Sbjct: 166 KSLQQHVQAMSV--GCIMKPAAAGVSYHPFLQPPPY 199
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+ L++LVP CN+ + +A +LD+ +NYV++L+ Q+
Sbjct: 195 RARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQV 254
Query: 128 EMMSAQ 133
E +S +
Sbjct: 255 EFLSMK 260
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 65 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 124
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 125 EFLSMKLATV 134
>gi|356571248|ref|XP_003553791.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 619
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 63 ERKPDNR---PKRTHSAEV-HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ERKP R P A + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+
Sbjct: 418 ERKPRKRGRKPANGREAPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIA 477
Query: 119 YVKALRHQLEMMSAQ 133
Y+ L+ ++ +M A+
Sbjct: 478 YINELQAKVRIMEAE 492
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 222 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 281
Query: 128 EMMS 131
E +S
Sbjct: 282 EFLS 285
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP+C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 26 RARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQI 85
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 86 EFLSMKLAAV 95
>gi|79375674|ref|NP_176991.2| transcription factor bHLH109 [Arabidopsis thaliana]
gi|75287899|sp|Q5XVH0.1|BH109_ARATH RecName: Full=Transcription factor bHLH109; AltName: Full=Basic
helix-loop-helix protein 109; Short=AtbHLH109;
Short=bHLH 109; AltName: Full=bHLH transcription factor
bHLH109
gi|52354203|gb|AAU44422.1| hypothetical protein AT1G68240 [Arabidopsis thaliana]
gi|60547661|gb|AAX23794.1| hypothetical protein At1g68240 [Arabidopsis thaliana]
gi|332196649|gb|AEE34770.1| transcription factor bHLH109 [Arabidopsis thaliana]
Length = 185
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 16 QSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEIS--EGMERKPDNR---- 69
+++RNE + + + S S + S+ +HS + + T+ + E + +PD
Sbjct: 3 RNNRNEGTHEEEQCSLSDIIYSFCSENHSELNPLQEIFGVTKNNDHEKHDEEPDEESYRM 62
Query: 70 PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPN-CNKSDRASVLDDAVNYVKALRHQLE 128
KR S E E++RR I ++ L+ L+PN C K D AS L++ + Y+K+L++Q++
Sbjct: 63 AKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKPDLASKLENIIEYIKSLKYQVD 122
Query: 129 MMSAQGGAIFQSPFMSPSGHQSTEVPQIS------PNVPISPKLGM 168
+MS A +P +P + + + P +S P VP+ P+ M
Sbjct: 123 VMSM---AYTTTPVYTPPFYAAAQAPCMSPWGYYTPGVPMMPQQNM 165
>gi|163311842|gb|ABY26934.1| putative anthocyanin transcriptional regulator [Ipomoea lacunosa]
Length = 669
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL-EMMSAQGGA 136
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR ++ E+ +A+GGA
Sbjct: 475 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGGA 533
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN++L+ L++LVP C K+ A +LD +NYV++L++Q+
Sbjct: 141 RAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQI 200
Query: 128 EMMSAQ 133
E +S +
Sbjct: 201 EFLSMK 206
>gi|359479613|ref|XP_002282584.2| PREDICTED: transcription factor bHLH3-like [Vitis vinifera]
Length = 491
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ERKP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 326 ERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIS 385
Query: 119 YVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQI 156
Y+ L+ ++ ++ A+ + SP VPQI
Sbjct: 386 YITDLQMKIRILEAEKEIVNNKQNQSP-------VPQI 416
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +LD+ +NYV++L+ Q+
Sbjct: 55 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 114
Query: 128 EMMSAQGGAIFQSP 141
E +S + ++ P
Sbjct: 115 ESLSMKLASVNPGP 128
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN++L+ L+ +VP C K+ A +LD+ +NYV++L+HQ+
Sbjct: 156 RARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQV 215
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 216 EFLSLKLTA 224
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L+ LVP C K + +A +LD+ +NYV++L+ Q+
Sbjct: 260 RARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQV 319
Query: 128 EMMS 131
E +S
Sbjct: 320 EFLS 323
>gi|255572174|ref|XP_002527027.1| hypothetical protein RCOM_1311460 [Ricinus communis]
gi|223533662|gb|EEF35399.1| hypothetical protein RCOM_1311460 [Ricinus communis]
Length = 260
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 12/95 (12%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+RT SA ERRRR+RI ++LK+L EL+P+C+K D AS+L+ A++Y+KAL+ Q+EMM
Sbjct: 98 RRTRSATY----ERRRRNRIREKLKALGELIPHCHKQDTASLLEAAIDYLKALKLQVEMM 153
Query: 131 SAQ-GGAIFQSPFMSPSGHQSTEVPQISPNVPISP 164
S GGA+ Q+ MS + + P +P+ P
Sbjct: 154 SNMGGGALCQASSMSAAHY-------FCPVMPMDP 181
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R ++ + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 177 RARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQV 236
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 237 EFLSMKLSAV 246
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 53/83 (63%), Gaps = 13/83 (15%)
Query: 90 INKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQ 149
I +++++L+EL+P+CNK+D+AS+LD+ + Y+K+L+ Q+++M G + P + P HQ
Sbjct: 205 IKEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMV---PMVFPGAHQ 261
Query: 150 STEVPQISPNVPISPKLGMGSGI 172
+P ++ LGM SG
Sbjct: 262 Y--MPPMA--------LGMNSGC 274
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A +LD+ +NYV++L++Q+
Sbjct: 148 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQV 207
Query: 128 EMMS 131
E +S
Sbjct: 208 EFLS 211
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 140 RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQV 199
Query: 128 EMMS 131
E +S
Sbjct: 200 EFLS 203
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN++L+ L++LVP C K+ A +LD +NYV++L++Q+
Sbjct: 120 RAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQI 179
Query: 128 EMMSAQ 133
E +S +
Sbjct: 180 EFLSMK 185
>gi|224067996|ref|XP_002302637.1| predicted protein [Populus trichocarpa]
gi|222844363|gb|EEE81910.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 45/59 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ L+ +L+ M A+ G +
Sbjct: 376 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYINELQAKLKKMEAERGKL 434
>gi|297735523|emb|CBI17963.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ERKP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 290 ERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIS 349
Query: 119 YVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQI 156
Y+ L+ ++ ++ A+ + SP VPQI
Sbjct: 350 YITDLQMKIRILEAEKEIVNNKQNQSP-------VPQI 380
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN++L+ L++LVP C K+ A +LD +NYV++L++Q+
Sbjct: 124 RAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQI 183
Query: 128 EMMSAQ 133
E +S +
Sbjct: 184 EFLSMK 189
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP CNK + +A VL++ +NYV++L+ Q+
Sbjct: 113 RSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQV 172
Query: 128 EMMSAQGGAIFQSPF--MSPSGHQSTE 152
E++S + ++ + +GH S E
Sbjct: 173 EILSVKLTSVLSRCHFDLQINGHPSKE 199
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 17 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 76
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 77 EFLSMKLAAV 86
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C K + +A +LD+ +NYV++L+ Q+
Sbjct: 389 RARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQV 448
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 449 ESLSMKVASV 458
>gi|13346180|gb|AAK19612.1|AF336279_1 GHDEL61 [Gossypium hirsutum]
Length = 624
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
RP+ + H SERRRR++IN+RL LK LVP +K+D+ S+LDD + Y++ L ++E
Sbjct: 415 RPEADELCKSHVLSERRRREKINERLMILKSLVPTNSKADKVSILDDTIEYLQDLERRVE 474
Query: 129 MMSA 132
+
Sbjct: 475 ELEC 478
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A +LD+ +NYV++L++Q+
Sbjct: 157 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQV 216
Query: 128 EMMSAQ 133
E +S +
Sbjct: 217 EFLSMK 222
>gi|192766596|gb|ACF05947.1| MYC1 [Hevea brasiliensis]
Length = 476
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI- 137
H ++ER+RR+R+N R +L+ +VPN +K D+AS+L DAV Y+K L+ +++ + ++ A+
Sbjct: 307 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKVDELESKLQAVS 366
Query: 138 FQSPFMSPSGHQSTE 152
+S S + +QST+
Sbjct: 367 KKSKITSVTDNQSTD 381
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A +LD+ +NYV++L++Q+
Sbjct: 154 RARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQV 213
Query: 128 EMMSAQ 133
E +S +
Sbjct: 214 EFLSMK 219
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 64 RKPDNRPKRTHSAEVHNQS--ERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
R+P + + SA QS R+RR+RIN+RLK L+ LVPN K D +++L++AV+YVK
Sbjct: 220 RRPKGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVK 279
Query: 122 ALRHQLEMMSA 132
L+ Q+ ++S+
Sbjct: 280 FLQLQIRLLSS 290
>gi|193734712|gb|ACF19982.1| MYC2 [Hevea brasiliensis]
Length = 476
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI- 137
H ++ER+RR+R+N R +L+ +VPN +K D+AS+L DAV Y+K L+ +++ + ++ A+
Sbjct: 307 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKVDELESKLQAVS 366
Query: 138 FQSPFMSPSGHQSTE 152
+S S + +QST+
Sbjct: 367 KKSKITSVTDNQSTD 381
>gi|449519754|ref|XP_004166899.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 53 SDATEISEGMERKPDNRPKRT-----HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS 107
SD+ + G+ +K + R +A H ++ER+RR+++N R +L+ +VPN ++
Sbjct: 221 SDSPVLKTGVMKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRM 280
Query: 108 DRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ AL+ ++E M Q
Sbjct: 281 DKASLLSDAVSYINALKAKVEEMELQ 306
>gi|242075462|ref|XP_002447667.1| hypothetical protein SORBIDRAFT_06g012030 [Sorghum bicolor]
gi|241938850|gb|EES11995.1| hypothetical protein SORBIDRAFT_06g012030 [Sorghum bicolor]
Length = 364
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 54 DATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVL 113
D ++S G RK +R K SER+RR R+ ++L L+ LVPN K D+AS++
Sbjct: 144 DGDDVSAGATRKRRDRSKTI-------VSERKRRVRMKEKLYELRSLVPNITKMDKASII 196
Query: 114 DDAVNYVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQ 155
DAV YVK L+ + + A+ P MSP+ Q PQ
Sbjct: 197 ADAVVYVKNLQAHARNLKEEVAALEARP-MSPASRQEQPQPQ 237
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ ++YV++L++Q+
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQV 240
Query: 128 EMMSAQGGAIFQSPFMSPSG 147
E +S + ++ SP M G
Sbjct: 241 EFLSMKLASL--SPLMYEFG 258
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%)
Query: 56 TEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDD 115
+++SE + K R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++
Sbjct: 225 SKVSEALNSKGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEE 284
Query: 116 AVNYVKALRHQLEMMSA 132
AV YVK L+ Q++++S+
Sbjct: 285 AVQYVKFLQLQIKLLSS 301
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 342 RARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 401
Query: 128 EMMSAQ 133
E +S +
Sbjct: 402 EFLSMK 407
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 342 RARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 401
Query: 128 EMMSAQ 133
E +S +
Sbjct: 402 EFLSMK 407
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L++LVP CNK + +A ++D+ +NYV++L+ Q+
Sbjct: 219 RARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQV 278
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 279 EFLSMKLEAV 288
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 68 NRPKRTHS-AEVHNQSERRRRDRINKRLKSLKELVPNC-NKSDRASVLDDAVNYVKALRH 125
R KR+H AE H+ +E+RRR +I ++LK+L++LVP C N S++AS LD + Y+K+L+
Sbjct: 155 GRGKRSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQASTLDQTIRYIKSLQQ 214
Query: 126 QL 127
+
Sbjct: 215 HI 216
>gi|449445714|ref|XP_004140617.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 53 SDATEISEGMERKPDNRPKRT-----HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS 107
SD+ + G+ +K + R +A H ++ER+RR+++N R +L+ +VPN ++
Sbjct: 221 SDSPVLKTGVMKKTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRM 280
Query: 108 DRASVLDDAVNYVKALRHQLEMMSAQ 133
D+AS+L DAV+Y+ AL+ ++E M Q
Sbjct: 281 DKASLLSDAVSYINALKAKVEEMELQ 306
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLEM 129
+R +A H+ +ER RR++I++R+K L++LVP C++ + + VLD+ +NYV++L+ Q+E+
Sbjct: 208 RRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVEL 267
Query: 130 MSAQGGAI 137
+S + ++
Sbjct: 268 LSMKLASV 275
>gi|302807648|ref|XP_002985518.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
gi|300146724|gb|EFJ13392.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
Length = 551
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRA 110
D SD ++ + + K R R H ++ + +ER+RR ++N+RL SL+ LVP K DRA
Sbjct: 309 DSSDCSDQVDEDDEKATGRSGRRHLSK-NLVAERKRRKKLNERLYSLRALVPKITKMDRA 367
Query: 111 SVLDDAVNYVKALRHQLEMM 130
S+L DA+ YVK L+ Q++ +
Sbjct: 368 SILGDAIEYVKELQQQVKEL 387
>gi|297794559|ref|XP_002865164.1| hypothetical protein ARALYDRAFT_916752 [Arabidopsis lyrata subsp.
lyrata]
gi|297310999|gb|EFH41423.1| hypothetical protein ARALYDRAFT_916752 [Arabidopsis lyrata subsp.
lyrata]
Length = 610
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 61/96 (63%), Gaps = 10/96 (10%)
Query: 42 SHSLDTDVDDFSDATEISEGM-----ERKPDNRPKRTHSAEV----HNQSERRRRDRINK 92
+ S+D+D D +A+ + E + E+KP R ++ + H ++ER+RR+++N+
Sbjct: 389 AKSVDSDHSDL-EASVVKEAIVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQ 447
Query: 93 RLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R SL+ +VPN +K D+AS+L DA++Y+ L+ +L+
Sbjct: 448 RFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQ 483
>gi|449468542|ref|XP_004151980.1| PREDICTED: transcription factor bHLH3-like [Cucumis sativus]
gi|449505155|ref|XP_004162392.1| PREDICTED: transcription factor bHLH3-like [Cucumis sativus]
Length = 501
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 60 EGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDD 115
+G +RKP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L D
Sbjct: 335 QGDDRKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGD 394
Query: 116 AVNYVKALRHQLEMMSAQ 133
A+ Y+ L+ ++++M +
Sbjct: 395 AITYITDLQMKIKVMETE 412
>gi|302820581|ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
gi|300140199|gb|EFJ06925.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
Length = 551
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 51 DFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRA 110
D SD ++ + + K R R H ++ + +ER+RR ++N+RL SL+ LVP K DRA
Sbjct: 309 DSSDCSDQVDEDDEKATGRSGRRHLSK-NLVAERKRRKKLNERLYSLRALVPKITKMDRA 367
Query: 111 SVLDDAVNYVKALRHQLEMM 130
S+L DA+ YVK L+ Q++ +
Sbjct: 368 SILGDAIEYVKELQQQVKEL 387
>gi|62318640|dbj|BAD95106.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 278
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 13/118 (11%)
Query: 27 LESSASQLPTSW--HQTSHSLDT----DVDDFSDATEI--SEGMERKPDNRP-----KRT 73
+ +SAS SW ++ SL T D D F +E +EG E++ +R
Sbjct: 18 VTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRG 77
Query: 74 HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
+A +HN+SERRRRDRIN+R+++L++L+P +K+D+ S+LDD + ++K L+ Q++ MS
Sbjct: 78 RAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMS 135
>gi|79331774|ref|NP_001032117.1| transcription factor PIF7 [Arabidopsis thaliana]
gi|9757848|dbj|BAB08482.1| unnamed protein product [Arabidopsis thaliana]
gi|45935023|gb|AAS79546.1| At5g61270 [Arabidopsis thaliana]
gi|46367462|emb|CAG25857.1| hypothetical protein [Arabidopsis thaliana]
gi|332010063|gb|AED97446.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 278
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 13/118 (11%)
Query: 27 LESSASQLPTSW--HQTSHSLDT----DVDDFSDATEI--SEGMERKPDNRP-----KRT 73
+ +SAS SW ++ SL T D D F +E +EG E++ +R
Sbjct: 18 VTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRG 77
Query: 74 HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
+A +HN+SERRRRDRIN+R+++L++L+P +K+D+ S+LDD + ++K L+ Q++ MS
Sbjct: 78 RAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMS 135
>gi|255557569|ref|XP_002519814.1| Transcription factor AtMYC2, putative [Ricinus communis]
gi|223540860|gb|EEF42418.1| Transcription factor AtMYC2, putative [Ricinus communis]
Length = 663
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 466 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 525
Query: 119 YVKALRHQLE 128
Y+K LR +L+
Sbjct: 526 YIKELRTKLQ 535
>gi|32527639|gb|AAP86213.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 277
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 13/118 (11%)
Query: 27 LESSASQLPTSW--HQTSHSLDT----DVDDFSDATEI--SEGMERKPDNRP-----KRT 73
+ +SAS SW ++ SL T D D F +E +EG E++ +R
Sbjct: 18 VTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRG 77
Query: 74 HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
+A +HN+SERRRRDRIN+R+++L++L+P +K+D+ S+LDD + ++K L+ Q++ MS
Sbjct: 78 RAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMS 135
>gi|218478035|dbj|BAH03388.1| bHLH transcriptional factor [Gentiana triflora]
gi|218478037|dbj|BAH03387.1| bHLH transcriptional factor [Gentiana triflora]
Length = 661
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H SERRRR+++N+R +L+ LVP K D+ASVL D + YVK LR +++ + A+
Sbjct: 477 HVLSERRRREKLNERFITLRSLVPFVTKMDKASVLGDTIEYVKQLRKKIQELEAR 531
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I ++K L++LVP CNK +A +LD+ +NYV++L+ Q+
Sbjct: 69 RARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQV 128
Query: 128 EMMS 131
E +S
Sbjct: 129 EFLS 132
>gi|27650307|emb|CAD54298.1| bHLH transcription factor [Brassica napus]
Length = 564
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 46 DTDVDDFSDATEISEGMERKPDNRPKRT---HSAEVHNQSERRRRDRINKRLKSLKELVP 102
D ++++ + ++ S+ ++ + D + K+ H+ + +ERRRR ++N RL +L+ LVP
Sbjct: 274 DKEMNENATGSDCSDQIDDEDDPKCKKKTGKHTQAKNLHAERRRRKKLNDRLYALRSLVP 333
Query: 103 NCNKSDRASVLDDAVNYVKALRHQ 126
K DRAS+L DA+NYVK L+++
Sbjct: 334 RITKLDRASILGDAINYVKELQNE 357
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A +LD+ +NYV++L++Q+
Sbjct: 158 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQV 217
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 218 EFLSMKLTA 226
>gi|42568685|ref|NP_200935.2| transcription factor PIF7 [Arabidopsis thaliana]
gi|182676517|sp|Q570R7.2|PIF7_ARATH RecName: Full=Transcription factor PIF7; AltName: Full=Basic
helix-loop-helix protein 72; Short=AtbHLH72; Short=bHLH
72; AltName: Full=Phytochrome-interacting factor 7;
AltName: Full=Transcription factor EN 109; AltName:
Full=bHLH transcription factor bHLH072
gi|225879146|dbj|BAH30643.1| hypothetical protein [Arabidopsis thaliana]
gi|332010062|gb|AED97445.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 366
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 13/118 (11%)
Query: 27 LESSASQLPTSW--HQTSHSLDT----DVDDFSDATEI--SEGMERKPDNRP-----KRT 73
+ +SAS SW ++ SL T D D F +E +EG E++ +R
Sbjct: 106 VTASASGTNMSWASFESGRSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRG 165
Query: 74 HSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMS 131
+A +HN+SERRRRDRIN+R+++L++L+P +K+D+ S+LDD + ++K L+ Q++ MS
Sbjct: 166 RAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMS 223
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN +L+ L+++VP C+KS A +L++ +NYV +L++Q+
Sbjct: 159 RAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQV 218
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 219 EFLSMELAA 227
>gi|168025464|ref|XP_001765254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683573|gb|EDQ69982.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 800
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
RKP N + S H Q+ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L
Sbjct: 575 RKPANDREEPLS---HVQAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL 631
Query: 124 RHQLEMMSAQ 133
+L+ AQ
Sbjct: 632 TSKLQSAEAQ 641
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R++ L+ELVP CNK + +A +LD+ +NY+++L+ Q+
Sbjct: 49 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQV 108
Query: 128 EMMSAQGGAI 137
E +S + +
Sbjct: 109 EFLSMKLATV 118
>gi|255570649|ref|XP_002526279.1| conserved hypothetical protein [Ricinus communis]
gi|223534360|gb|EEF36068.1| conserved hypothetical protein [Ricinus communis]
Length = 271
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 34/109 (31%)
Query: 83 ERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL------RHQL--------- 127
E++RR+RI +LK+L EL+PNC+K D AS+L A++Y+++L RH L
Sbjct: 121 EKKRRNRIRDKLKALGELIPNCHKQDTASILVHAIDYIRSLQLQIYVRHSLRGLLFNKVP 180
Query: 128 ------------EMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVPISP 164
+M + GGAI Q+ MS VP P +P +P
Sbjct: 181 LNGKSLSYFLVKKMSNMNGGAICQALCMS-------AVPYTCPVMPTNP 222
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQV 318
Query: 128 EMMS 131
E +S
Sbjct: 319 EFLS 322
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 151 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 210
Query: 128 EMMS 131
E +S
Sbjct: 211 EFLS 214
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
S+ ++RK + R +++ + R+RR+RIN RLK+L+ LVPN K D +++L+DAV+
Sbjct: 125 SKSLKRKA--KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVH 182
Query: 119 YVKALRHQLEMMSAQ 133
YVK L+ Q++++S++
Sbjct: 183 YVKFLQLQIKLLSSE 197
>gi|115435532|ref|NP_001042524.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|113532055|dbj|BAF04438.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|215694296|dbj|BAG89289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768046|dbj|BAH00275.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 617
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 464 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 523
Query: 139 QSPFMSP 145
+S + P
Sbjct: 524 ESGMIDP 530
>gi|56783853|dbj|BAD81265.1| bHLH protein -like [Oryza sativa Japonica Group]
gi|125569662|gb|EAZ11177.1| hypothetical protein OsJ_01027 [Oryza sativa Japonica Group]
Length = 613
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 460 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 519
Query: 139 QSPFMSP 145
+S + P
Sbjct: 520 ESGMIDP 526
>gi|125547213|gb|EAY93035.1| hypothetical protein OsI_14836 [Oryza sativa Indica Group]
Length = 613
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 460 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 519
Query: 139 QSPFMSP 145
+S + P
Sbjct: 520 ESGMIDP 526
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 279 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQV 338
Query: 128 EMMS 131
E +S
Sbjct: 339 EFLS 342
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +LD+ +NYV+ L++Q+
Sbjct: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
Query: 128 EMMSAQGGAI 137
E +S + ++
Sbjct: 244 EFLSMKLASV 253
>gi|413947858|gb|AFW80507.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413947859|gb|AFW80508.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 611
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 458 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 517
Query: 139 QSPFMSP 145
+S + P
Sbjct: 518 ESGMVDP 524
>gi|242051457|ref|XP_002454874.1| hypothetical protein SORBIDRAFT_03g000570 [Sorghum bicolor]
gi|241926849|gb|EER99993.1| hypothetical protein SORBIDRAFT_03g000570 [Sorghum bicolor]
Length = 622
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 47/67 (70%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M ++ +
Sbjct: 469 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMESERERLL 528
Query: 139 QSPFMSP 145
+S + P
Sbjct: 529 ESGMVDP 535
>gi|297816208|ref|XP_002875987.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
gi|297321825|gb|EFH52246.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 9/74 (12%)
Query: 70 PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM 129
P RT A ++RRD INK++++L++L+PN +K D SVLD+A+NY+K L+ Q++M
Sbjct: 134 PARTRKAL------KQRRD-INKKMRTLQDLLPNSHKDDNESVLDEAINYMKNLQLQVQM 186
Query: 130 MSAQGGAIFQSPFM 143
M+ G F +P M
Sbjct: 187 MTM--GNTFVTPSM 198
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R R + + + R+RR+RIN+RL+ L++LVPN K D +++L++AV+YVK L+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 125 HQLEMMSA 132
Q++++S+
Sbjct: 294 LQIKLLSS 301
>gi|357476655|ref|XP_003608613.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355509668|gb|AES90810.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 366
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 62 MERKPDNRPKRTHS-AEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
+++KP +PKR+ + A+ H +ER+RR+++++ +L LVPN K D+ASVL +++ YV
Sbjct: 165 LQQKP-LKPKRSRANADDHIMAERKRREKLSQSFIALAALVPNLKKMDKASVLAESIIYV 223
Query: 121 KALRHQLEMMSAQG 134
K L+ +LE++ Q
Sbjct: 224 KELKERLEVLEEQN 237
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
KP R R + + + R+RR+RIN+RL+ L++LVPN K D +++L++AV+YVK L+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 125 HQLEMMSA 132
Q++++S+
Sbjct: 294 LQIKLLSS 301
>gi|226502112|ref|NP_001146245.1| uncharacterized protein LOC100279818 [Zea mays]
gi|219886371|gb|ACL53560.1| unknown [Zea mays]
Length = 616
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 462 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 521
Query: 139 QSPFMSP 145
+S + P
Sbjct: 522 ESGMVDP 528
>gi|18407096|ref|NP_566078.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
gi|75315651|sp|Q9ZPY8.2|AIB_ARATH RecName: Full=Transcription factor ABA-INDUCIBLE bHLH-TYPE;
Short=AtAIB; AltName: Full=Basic helix-loop-helix
protein 17; Short=AtbHLH17; Short=bHLH 17; AltName:
Full=Transcription factor EN 35; AltName: Full=bHLH
transcription factor bHLH017
gi|20197775|gb|AAD20162.2| putative bHLH transcription factor [Arabidopsis thaliana]
gi|20197823|gb|AAM15265.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255618|gb|AEC10712.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
Length = 566
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 376 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIS 435
Query: 119 YVKALRHQLEMM 130
Y+K L+ ++++M
Sbjct: 436 YIKELQEKVKIM 447
>gi|380006417|gb|AFD29599.1| DEL61 [Gossypium arboreum]
Length = 603
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
RP+ + H +ERRRR++IN+RL LK LVP +K+D+ S+LDD + Y++ L ++E
Sbjct: 415 RPEADELCKSHVLTERRRREKINERLTILKSLVPTNSKADKVSILDDTIEYLQDLERRVE 474
Query: 129 MMSA 132
+
Sbjct: 475 ELEC 478
>gi|414875585|tpg|DAA52716.1| TPA: hypothetical protein ZEAMMB73_145518 [Zea mays]
Length = 616
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 462 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 521
Query: 139 QSPFMSP 145
+S + P
Sbjct: 522 ESGMVDP 528
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
S + K R R + + + R+RR+RIN+RLK L+ LVPN K D +++L++AV
Sbjct: 250 SAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVE 309
Query: 119 YVKALRHQLEMMSA 132
YVK L+ Q++++S+
Sbjct: 310 YVKFLQLQIKLLSS 323
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 65 KPDN----RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSD-RASVLDDAVNY 119
KPD R +R + + H+ +ER RR++I RL+ L++LVP C K+ A +LD+ +NY
Sbjct: 195 KPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINY 254
Query: 120 VKALRHQLEMMSAQGGA 136
V +L++Q+E +S + A
Sbjct: 255 VHSLQNQVEFLSRELAA 271
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+K R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++A YVK L
Sbjct: 192 KKTCTRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFL 251
Query: 124 RHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVP 161
+ Q++++S+ ++ +P + + + N+P
Sbjct: 252 QLQIKLLSSDDMWMY-----APIAYNGINISNVDLNIP 284
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+K R R + + + R+RR+RIN+RL+ L++LVPN K D +++L++A YVK L
Sbjct: 186 KKAYTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFL 245
Query: 124 RHQLEMMSAQGGAIFQSPFMSPSGHQSTEVPQISPNVP 161
+ Q++++S+ ++ +P + + + N+P
Sbjct: 246 QLQIKLLSSDDTWMY-----APIAYNGINISNVDLNIP 278
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L++LVP C+K + +A +L++ +NYV++L+ Q+
Sbjct: 7 RARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQI 66
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 67 EFLSMKLAAV 76
>gi|356536812|ref|XP_003536928.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
Length = 504
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ERKP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+
Sbjct: 337 ERKPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIT 396
Query: 119 YVKALRHQLEMMSAQ 133
++ L+ +++++ A+
Sbjct: 397 FITDLQMKIKVLEAE 411
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQLEM 129
+R +A H+ +ER RR++I++R+K L++LVP C++ + + VLD+ +NYV++L+ Q+E
Sbjct: 208 RRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQVEF 267
Query: 130 MSAQGGAI 137
+S + ++
Sbjct: 268 LSMKLASV 275
>gi|255545950|ref|XP_002514035.1| DNA binding protein, putative [Ricinus communis]
gi|223547121|gb|EEF48618.1| DNA binding protein, putative [Ricinus communis]
Length = 246
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 73 THSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
T + H ++ERRRR RIN L +L+ L+P+ K+D+AS+L + V++VK LR Q A
Sbjct: 44 TDPCKSHKEAERRRRQRINAHLSTLRTLLPSTTKTDKASLLAEVVHHVKELRKQATSQVA 103
Query: 133 QGGAIFQSP 141
+GG + P
Sbjct: 104 RGGGETELP 112
>gi|297828381|ref|XP_002882073.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327912|gb|EFH58332.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 563
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 51/72 (70%), Gaps = 4/72 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 376 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIS 435
Query: 119 YVKALRHQLEMM 130
Y+K L+ ++++M
Sbjct: 436 YIKELQEKVKIM 447
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR++IN +L+ L++LVP C++S A +L++ +NYV +L++Q+
Sbjct: 149 RAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQV 208
Query: 128 EMMSAQGGA 136
E +S + A
Sbjct: 209 EFLSMELAA 217
>gi|312281909|dbj|BAJ33820.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 50/61 (81%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R +A +HN+SERRRRDRIN+R+++L++L+P +K+D+ S+LDD + ++K L+ Q++ M
Sbjct: 162 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM 221
Query: 131 S 131
S
Sbjct: 222 S 222
>gi|226529544|ref|NP_001145780.1| uncharacterized protein LOC100279287 [Zea mays]
gi|219884401|gb|ACL52575.1| unknown [Zea mays]
Length = 455
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 302 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 361
Query: 139 QSPFMSP 145
+S + P
Sbjct: 362 ESGMVDP 368
>gi|168042679|ref|XP_001773815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674930|gb|EDQ61432.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
H +ERRRR+++N R +L+EL+PN +K D+AS+L A+ YVK L+ QL + + A
Sbjct: 213 HVLAERRRREKLNDRFVALRELIPNVSKMDKASILGVAIEYVKELQSQLRALENEDKA 270
>gi|356548045|ref|XP_003542414.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
Length = 478
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ERKP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+
Sbjct: 310 ERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIT 369
Query: 119 YVKALRHQLEMMSAQGGAI 137
++ L+ +++++ A+ I
Sbjct: 370 FITDLQMKIKVLEAEKNMI 388
>gi|302762739|ref|XP_002964791.1| hypothetical protein SELMODRAFT_230501 [Selaginella moellendorffii]
gi|300167024|gb|EFJ33629.1| hypothetical protein SELMODRAFT_230501 [Selaginella moellendorffii]
Length = 172
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
+ERRRR ++N RL +L+ +VP +K DR S+L DA++Y+K L+ ++E + QSP
Sbjct: 2 AERRRRKKLNDRLYTLRSIVPKISKMDRTSILGDAIDYLKELQQRIETVYTD----LQSP 57
Query: 142 FMSPSGHQ 149
MS + Q
Sbjct: 58 VMSFASKQ 65
>gi|163311844|gb|ABY26935.1| putative anthocyanin transcriptional regulator [Ipomoea violacea]
Length = 684
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
H +ERRRR+++NKR L+ LVP K D+AS+L D + YVK LR +++ + A G+
Sbjct: 487 HVLAERRRREKLNKRFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGS 544
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R KR + + + R RR+RIN+RLK+L+ LVPN K D ++L++A++YVK L+ Q+
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVN 271
Query: 129 MMSA 132
M+S+
Sbjct: 272 MLSS 275
>gi|448970763|emb|CCQ71910.1| transcription factor MYC2, partial [Brassica napus]
Length = 320
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 12 SEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERKPDNRPK 71
S GQ+ N+ F++ T ++ HS D++ F EI E +K +P
Sbjct: 214 SNSGQTQLENNTKKFIDDKVLSFGTGGGESDHS---DLEAFI-VKEIPEKRPKKRGRKPA 269
Query: 72 RTHSAEV-HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
+ H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+
Sbjct: 270 NGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYI 319
>gi|326500360|dbj|BAK06269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 558
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
+ERRRR ++N RL L+ LVPN K DRAS+L DA++Y+ L+ Q++
Sbjct: 296 AERRRRKKLNDRLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVK 342
>gi|51572284|gb|AAU06823.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 312
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 46/67 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M + +
Sbjct: 172 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 231
Query: 139 QSPFMSP 145
+S + P
Sbjct: 232 ESGMIDP 238
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 67 DNRPKRTHSAEVHNQS--ERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
D + + T SA QS R+RR+RIN+RL+ L+ LVPN K D +++L++AV YVK L+
Sbjct: 261 DRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQ 320
Query: 125 HQLEMMSAQ 133
Q++++S++
Sbjct: 321 LQIKLLSSE 329
>gi|302756597|ref|XP_002961722.1| hypothetical protein SELMODRAFT_77288 [Selaginella moellendorffii]
gi|300170381|gb|EFJ36982.1| hypothetical protein SELMODRAFT_77288 [Selaginella moellendorffii]
Length = 175
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
+ERRRR ++N RL +L+ +VP +K DR S+L DA++Y+K L+ ++E + QSP
Sbjct: 5 AERRRRKKLNDRLYTLRSIVPKISKMDRTSILGDAIDYLKELQQRIETVYTD----LQSP 60
Query: 142 FMSPSGHQ 149
MS + Q
Sbjct: 61 VMSFASKQ 68
>gi|388492758|gb|AFK34445.1| unknown [Lotus japonicus]
Length = 324
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 62 MERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ME K N RPK S + SERRRR R+ ++L +L+ LVPN K D+AS++ DAV+
Sbjct: 121 METKIVNGKSRPKTDRSKTL--ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVS 178
Query: 119 YVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVP 154
YV L+ Q + + + + S +S + + E P
Sbjct: 179 YVYDLQAQAKKLKTEVAGLEASLLVSQNYQATIESP 214
>gi|223702422|gb|ACN21642.1| putative basic helix-loop-helix protein BHLH20 [Lotus japonicus]
Length = 324
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 62 MERKPDN---RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ME K N RPK S + SERRRR R+ ++L +L+ LVPN K D+AS++ DAV+
Sbjct: 121 METKIVNGKSRPKTDRSKTL--ISERRRRGRMKEKLYALRALVPNITKMDKASIIGDAVS 178
Query: 119 YVKALRHQLEMMSAQGGAIFQSPFMSPSGHQSTEVP 154
YV L+ Q + + + + S +S + + E P
Sbjct: 179 YVYDLQAQAKKLKTEVAGLEASLLVSQNYQATIESP 214
>gi|1142619|gb|AAB00686.1| phaseolin G-box binding protein PG1 [Phaseolus vulgaris]
Length = 642
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 44/59 (74%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ L+ +L + ++ G +
Sbjct: 463 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLSELESEKGEL 521
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 41/49 (83%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR+RIN RLK+L+ LVPN K D +++L+DAV+YVK L+ Q++++S+
Sbjct: 149 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS 197
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 135 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 194
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 195 LQVKILSMSRLGGAGAVAPLVT 216
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 40/44 (90%)
Query: 85 RRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
+RRDRIN+++K+L++LVPN +K+D+AS+LD+ ++Y+K L+ Q++
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQ 55
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++R+K L+ LVP C+K + +A +LD+ ++YV++L++Q+
Sbjct: 181 RARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQV 240
Query: 128 EMMSAQGGAIFQSPFMSPSG 147
E +S + ++ +P M G
Sbjct: 241 EFLSMKLASL--NPLMYEFG 258
>gi|226497322|ref|NP_001142164.1| uncharacterized protein LOC100274330 [Zea mays]
gi|224031213|gb|ACN34682.1| unknown [Zea mays]
gi|413926621|gb|AFW66553.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 625
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 366 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 415
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
S ++ K +R +R + + + RRRR++IN+RLK L+ LVPN K D +++L++AV
Sbjct: 237 STTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 296
Query: 119 YVKALRHQLEMMSA 132
YVK L+ Q++++S+
Sbjct: 297 YVKFLQLQIKLLSS 310
>gi|224033315|gb|ACN35733.1| unknown [Zea mays]
gi|238015234|gb|ACR38652.1| unknown [Zea mays]
gi|413926622|gb|AFW66554.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413926623|gb|AFW66555.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 594
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 335 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 384
>gi|449470312|ref|XP_004152861.1| PREDICTED: transcription factor bHLH14-like [Cucumis sativus]
gi|449477853|ref|XP_004155143.1| PREDICTED: transcription factor bHLH14-like [Cucumis sativus]
Length = 308
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+KP+N P H ++ER+RR+++N R SL+ +VPN ++ D+AS+L DAV+Y+ L
Sbjct: 139 KKPENNPS------THVEAERQRREKLNDRFNSLRSVVPNVSRMDKASLLSDAVSYINEL 192
Query: 124 RHQLEMMSAQGGA 136
++ M ++ A
Sbjct: 193 EMKISEMESREEA 205
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++++ +L++++P CNK +A VLD+ +NY+++L+ Q+
Sbjct: 155 RARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQV 214
Query: 128 EMMSAQ 133
E +S +
Sbjct: 215 EFLSMK 220
>gi|224071909|ref|XP_002303592.1| predicted protein [Populus trichocarpa]
gi|222841024|gb|EEE78571.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 49 VDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSD 108
VD D+ E S ++ RP+ H SERRRR+++NKR LK +VP+ +K D
Sbjct: 401 VDGLLDSPEYSS--DKVVGGRPEADEIGASHVLSERRRREKLNKRFMILKSIVPSISKVD 458
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQ 133
+ S+LDD + Y++ L ++E + +
Sbjct: 459 KVSILDDTIQYLQELERKVEELECR 483
>gi|195638946|gb|ACG38941.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 410
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 150 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 199
>gi|18026958|gb|AAL55712.1|AF251690_1 putative transcription factor BHLH5 [Arabidopsis thaliana]
Length = 592
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E+KP R ++ + H ++ER+RR+++N+R SL+ +VPN +K D+AS+L DA++
Sbjct: 396 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 455
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 456 YINELKSKLQ 465
>gi|15237502|ref|NP_199488.1| transcription factor ATR2 [Arabidopsis thaliana]
gi|75309118|sp|Q9FIP9.1|ATR2_ARATH RecName: Full=Transcription factor ATR2; AltName: Full=Basic
helix-loop-helix protein 5; Short=AtbHLH5; Short=bHLH 5;
AltName: Full=Protein ALTERED TRYPTOPHAN REGULATION 2;
AltName: Full=Transcription factor EN 36; AltName:
Full=Transcription factor MYC3; AltName: Full=bHLH
transcription factor bHLH005
gi|9758512|dbj|BAB08920.1| bHLH protein-like [Arabidopsis thaliana]
gi|332008039|gb|AED95422.1| transcription factor ATR2 [Arabidopsis thaliana]
Length = 592
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E+KP R ++ + H ++ER+RR+++N+R SL+ +VPN +K D+AS+L DA++
Sbjct: 396 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 455
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 456 YINELKSKLQ 465
>gi|413926619|gb|AFW66551.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 526
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 267 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 316
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I++++ +L++++P CNK +A VLD+ +NY+++L+ Q+
Sbjct: 154 RARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQV 213
Query: 128 EMMSAQ 133
E +S +
Sbjct: 214 EFLSMK 219
>gi|194707424|gb|ACF87796.1| unknown [Zea mays]
gi|238014816|gb|ACR38443.1| unknown [Zea mays]
gi|413926620|gb|AFW66552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 557
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 298 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 347
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 151 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 210
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 211 LQVKVLSMSRLGGAGAVAPLVT 232
>gi|334200172|gb|AEG74013.1| lMYC3 [Hevea brasiliensis]
Length = 475
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 44/59 (74%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H ++ER+RR+R+N R +L+ +VPN +K D+AS+L DAV Y+K L+ +++ + ++ A+
Sbjct: 301 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKVDELESKLQAV 359
>gi|357476615|ref|XP_003608593.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355509648|gb|AES90790.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 252
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 73 THSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
TH H +ER RR++I++ +L L+PN K D+ASVL DA+ YVK L+ Q++M+
Sbjct: 65 THHTPDHIIAERIRREKISQLFIALSALIPNLKKMDKASVLGDAIKYVKELKEQVKMLEE 124
Query: 133 QGGAI 137
Q ++
Sbjct: 125 QSKSV 129
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 69 RPKRTH---SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRH 125
+PKR + S + + R RR+RIN++++ L++LVP +K D AS+LD+A NY+K LR
Sbjct: 332 KPKRKNVKISTDPQTVAARHRRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRS 391
Query: 126 QLEMMSAQGGAI 137
Q++ + + G +
Sbjct: 392 QVKALESLGNKV 403
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR +IN+RL+ L+++VP C K+ A +LD+ +NYV++L++Q+
Sbjct: 74 RARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQV 133
Query: 128 EMMSAQ 133
E +S +
Sbjct: 134 EFLSMK 139
>gi|20453066|gb|AAM19778.1| At2g46510/F13A10.4 [Arabidopsis thaliana]
Length = 566
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 50/72 (69%), Gaps = 4/72 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H + ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 376 EKRPRKRGRKPANGREEPLNHVEVERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIS 435
Query: 119 YVKALRHQLEMM 130
Y+K L+ ++++M
Sbjct: 436 YIKELQEKVKIM 447
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++AVNYVK L+ Q++
Sbjct: 265 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIK 324
Query: 129 MMSAQGGAIFQSPF 142
++S+ ++ +PF
Sbjct: 325 LLSSDDLWMY-APF 337
>gi|413926618|gb|AFW66550.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 440
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 181 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 230
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 52 FSDATEISEGMERKPDNRPKRTH---SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSD 108
F A++ +E +RPKR + S + + + R RR+RI+ R++ L+ LVP K D
Sbjct: 413 FRHASQPVPSLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMD 472
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQG 134
AS+LD+A++YVK L+ QL+ + G
Sbjct: 473 TASMLDEAIHYVKFLKLQLQTLEQIG 498
>gi|327194899|gb|AEA34965.1| putative transcription factor BHLH2 [Ipomoea batatas]
Length = 667
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A G+ +
Sbjct: 473 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGSAW 532
Query: 139 QSPFMSPSG 147
+ S +G
Sbjct: 533 EVDRQSITG 541
>gi|302028371|gb|ADK91082.1| LMYC2 [Hevea brasiliensis]
Length = 475
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI- 137
+ ++ER+RR+R+N R +L+ +VPN +K D+AS+L DAV Y+K L+ +++ + ++ A+
Sbjct: 306 YVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKVDELESKLQAVS 365
Query: 138 FQSPFMSPSGHQSTE 152
+S S + +QST+
Sbjct: 366 KKSKITSVTDNQSTD 380
>gi|225427201|ref|XP_002280253.1| PREDICTED: transcription factor MYC2-like [Vitis vinifera]
Length = 663
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 45 LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKEL 100
L+ V +D++ + E E++P R ++ + H ++ER+RR+++N+R +L+ +
Sbjct: 445 LEASVVREADSSRVVEP-EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 503
Query: 101 VPNCNKSDRASVLDDAVNYVKALRHQLE 128
VPN +K D+AS+L DA++Y+ LR +L+
Sbjct: 504 VPNVSKMDKASLLGDAISYINELRTKLQ 531
>gi|449462019|ref|XP_004148739.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
gi|449514569|ref|XP_004164415.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
Length = 661
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N++ +L+ +VPN +K D+AS+L DAV+
Sbjct: 458 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAVS 517
Query: 119 YVKALRHQLEMMSAQ 133
Y+ L+ +L+M ++
Sbjct: 518 YINELKSKLQMAESE 532
>gi|357158353|ref|XP_003578101.1| PREDICTED: transcription factor bHLH30-like [Brachypodium
distachyon]
Length = 329
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H+++ERRRR RIN L L+ L+PN K+D+AS+L + + +VK L+ Q M+A A
Sbjct: 110 HSEAERRRRQRINAHLARLRSLLPNTTKTDKASLLAEVLEHVKELKRQTSAMTAAPPAAV 169
Query: 139 QSPFMSPSGHQSTEVPQI 156
+ P+ TE ++
Sbjct: 170 EDDAGGPATMLPTEADEL 187
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R KR + + H+ +ER RR+RIN++L+ L++LVP C K+ A +LD +NYV++L++Q+
Sbjct: 122 RAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQI 181
Query: 128 EM 129
E+
Sbjct: 182 EV 183
>gi|222355764|gb|ACM48567.1| JAMYC [Taxus cuspidata]
Length = 660
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 62 MERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAV 117
+ERKP R ++ + H ++ER+RR+++N+R+ +L+ +VPN +K D+AS+L DA+
Sbjct: 446 VERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRVYALRAVVPNVSKMDKASLLGDAI 505
Query: 118 NYVKALRHQL 127
Y+ LR ++
Sbjct: 506 AYINELRSKV 515
>gi|356504177|ref|XP_003520875.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 550
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 47 TDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVP 102
+DV+ + S ERKP R ++ + H ++ER+RR+++N+R +L+ +VP
Sbjct: 354 SDVEASCKEEQPSVADERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVP 413
Query: 103 NCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
N +K D+AS+L D + Y+ L+ ++++M A+
Sbjct: 414 NISKMDKASLLGDTIAYINELQAKVKIMEAE 444
>gi|223974811|gb|ACN31593.1| unknown [Zea mays]
Length = 403
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 144 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 193
>gi|195629918|gb|ACG36600.1| hypothetical protein [Zea mays]
Length = 409
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 150 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 199
>gi|194690494|gb|ACF79331.1| unknown [Zea mays]
gi|223947463|gb|ACN27815.1| unknown [Zea mays]
gi|413926617|gb|AFW66549.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 409
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 81 QSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
++ER+RR ++N+RL L+ LVPN +K DRA++L DA++Y+ L++Q++ +
Sbjct: 150 EAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQNQVKAL 199
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I+ R+K L+ LVP C++ + +A +L++ +NYVK+L+ Q+
Sbjct: 151 RARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQI 210
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 211 EFLSMKLAAV 220
>gi|357472093|ref|XP_003606331.1| BHLH transcription factor [Medicago truncatula]
gi|355507386|gb|AES88528.1| BHLH transcription factor [Medicago truncatula]
Length = 325
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SERRRR R+ +L +L+ LVPN K D+AS++ DAV+Y+ L+ Q + + A+ + S
Sbjct: 143 SERRRRSRMKDKLYALRSLVPNITKMDKASIIGDAVSYMHELQSQAKKLKAEVAGLEASL 202
Query: 142 FMSPSGHQSTEVPQ 155
+S + H S + P+
Sbjct: 203 AVSKTQHGSIDNPK 216
>gi|297793235|ref|XP_002864502.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310337|gb|EFH40761.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 247
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SER RR ++N+RL +L+ +VPN K D+AS++ DA++Y+K L+++ + A+ + +P
Sbjct: 58 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIKGLQYEEGKLEAEIRELESTP 117
Query: 142 FMSPSGHQSTEVPQISPNVPISPK--LGMGSGIGTGMVDVL 180
S S + + + VP++ K + SG T +++VL
Sbjct: 118 KSSLSFSKDFDRDLL---VPVTSKKMKQLDSGSSTSLIEVL 155
>gi|297800296|ref|XP_002868032.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313868|gb|EFH44291.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 598
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E+KP R ++ + H ++ER+RR+++N+R SL+ +VPN +K D+AS+L DA++
Sbjct: 406 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 465
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 466 YINELKSKLQ 475
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
S + K R R + + + R+RR+RIN+RLK L+ LVPN K D +++L++AV
Sbjct: 246 SAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVE 305
Query: 119 YVKALRHQLEMMSA 132
YVK L+ Q++++S+
Sbjct: 306 YVKFLQLQIKLLSS 319
>gi|312281855|dbj|BAJ33793.1| unnamed protein product [Thellungiella halophila]
Length = 606
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 59/96 (61%), Gaps = 9/96 (9%)
Query: 41 TSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV--------HNQSERRRRDRINK 92
+ S D+D D +A+ + E + +P+ +P++ H ++ER+RR+++N+
Sbjct: 387 AAKSGDSDHSDL-EASVVKEAIVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQ 445
Query: 93 RLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R SL+ +VPN ++ D+AS+L DA++Y+ L+ +L+
Sbjct: 446 RFYSLRAVVPNVSEMDKASLLGDAISYINELKSKLQ 481
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 59 SEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
S + K R R + + + R+RR+RIN+RLK L+ LVPN K D +++L++AV
Sbjct: 245 SAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVE 304
Query: 119 YVKALRHQLEMMSA 132
YVK L+ Q++++S+
Sbjct: 305 YVKFLQLQIKLLSS 318
>gi|255564675|ref|XP_002523332.1| DNA binding protein, putative [Ricinus communis]
gi|223537420|gb|EEF39048.1| DNA binding protein, putative [Ricinus communis]
Length = 615
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 42/55 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M A+
Sbjct: 447 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKSMEAE 501
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 134 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 193
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 194 LQVKVLSMSRLGGAGAVAPLVT 215
>gi|297797077|ref|XP_002866423.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
gi|297312258|gb|EFH42682.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 50/61 (81%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+R +A +HN+SERRRRDRIN+R+++L++L+P +K+D+ S+LDD + ++K L+ Q++ M
Sbjct: 206 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM 265
Query: 131 S 131
S
Sbjct: 266 S 266
>gi|18423944|ref|NP_568850.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|332009470|gb|AED96853.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 247
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SER RR ++N+RL +L+ +VPN K D+AS++ DA++Y++ L+++ + + A+ + +P
Sbjct: 58 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 117
Query: 142 FMSPSGHQSTEVPQISPNVPISPK--LGMGSGIGTGMVDVL 180
S S + + + VP++ K + SG T +++VL
Sbjct: 118 KSSLSFSKDFDRDLL---VPVTSKKMKQLDSGSSTSLIEVL 155
>gi|356513387|ref|XP_003525395.1| PREDICTED: transcription factor GLABRA 3-like [Glycine max]
Length = 631
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
H SERRRR ++N+R +L+ +VP+ +K D+ S+LDDA+ Y+K L ++ + A G
Sbjct: 432 HVMSERRRRAKLNQRFLTLRSMVPSISKDDKVSILDDAIEYLKKLERRINELEAHRGV 489
>gi|122232377|sp|Q2HIV9.1|BH035_ARATH RecName: Full=Transcription factor bHLH35; AltName: Full=Basic
helix-loop-helix protein 35; Short=AtbHLH35; Short=bHLH
35; AltName: Full=Transcription factor EN 41; AltName:
Full=bHLH transcription factor bHLH035
gi|87116578|gb|ABD19653.1| At5g57150 [Arabidopsis thaliana]
Length = 248
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SER RR ++N+RL +L+ +VPN K D+AS++ DA++Y++ L+++ + + A+ + +P
Sbjct: 59 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
Query: 142 FMSPSGHQSTEVPQISPNVPISPK--LGMGSGIGTGMVDVL 180
S S + + + VP++ K + SG T +++VL
Sbjct: 119 KSSLSFSKDFDRDLL---VPVTSKKMKQLDSGSSTSLIEVL 156
>gi|449461491|ref|XP_004148475.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
Length = 688
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 484 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 543
Query: 119 YVKALRHQLE 128
Y+ LR +L+
Sbjct: 544 YINELRGKLQ 553
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 20/109 (18%)
Query: 44 SLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEVH--------------------NQSE 83
S D VD+ S E + G++RK +R H EVH +
Sbjct: 51 SFDHQVDNLSSPDERNIGIKRKFQVDQERDHDNEVHAALSAPRKNGKKSRAAKDSQSHYA 110
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
++RR RIN+RL+ L++L+PN K D +++L++AV YVK L Q++++S+
Sbjct: 111 KKRRQRINERLRILQKLIPNGTKVDISTMLEEAVQYVKFLHLQIKLLSS 159
>gi|224138924|ref|XP_002326724.1| predicted protein [Populus trichocarpa]
gi|222834046|gb|EEE72523.1| predicted protein [Populus trichocarpa]
Length = 638
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 45 LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKEL 100
L+ V +D++ + E E++P R ++ + H ++ER+RR+++N+R +L+ +
Sbjct: 426 LEASVVKEADSSRVVEP-EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 484
Query: 101 VPNCNKSDRASVLDDAVNYVKALRHQLE 128
VPN +K D+AS+L DA++Y+ LR +L+
Sbjct: 485 VPNVSKMDKASLLGDAISYIDELRTKLQ 512
>gi|356495871|ref|XP_003516794.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 637
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 44/59 (74%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ L+ +L + ++ G +
Sbjct: 452 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKLKLNGLDSEKGEL 510
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 42/55 (76%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
R RR++IN+RLKSL+ LVPN K D ++LD+A++YVK L++Q+E++ + I+
Sbjct: 12 RHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELLKSDELWIY 66
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 61 GMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYV 120
G+ RK +R R + + + R+RR+RIN+RL+ L++LVPN K D +++L++AV+YV
Sbjct: 232 GVNRK--SRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYV 289
Query: 121 KALRHQLEMMSAQGGAIF 138
K L+ Q++++S+ +F
Sbjct: 290 KFLQLQIKLLSSDEMWMF 307
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+K R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++AV YVK L
Sbjct: 183 KKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 242
Query: 124 RHQLEMMSA 132
+ Q++++S+
Sbjct: 243 QLQIKLLSS 251
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++AVNYVK L+ Q++
Sbjct: 262 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIK 321
Query: 129 MMSA 132
++S+
Sbjct: 322 LLSS 325
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+K R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++AV YVK L
Sbjct: 183 KKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFL 242
Query: 124 RHQLEMMSA 132
+ Q++++S+
Sbjct: 243 QLQIKLLSS 251
>gi|163311840|gb|ABY26933.1| putative anthocyanin transcriptional regulator [Ipomoea trifida]
Length = 676
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL-EMMSAQGGA 136
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR ++ E+ +A+G A
Sbjct: 482 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGSA 540
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 40/49 (81%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR+RIN+RLK L+ LVPN K D +++L++AV YVK L+ Q++++S+
Sbjct: 234 RKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 282
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 124 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 183
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 184 LQVKVLSMSRLGGAGAVAPLVT 205
>gi|356497663|ref|XP_003517679.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 648
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 446 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 505
Query: 119 YVKALRHQLEMM 130
Y+ L+ +L+ +
Sbjct: 506 YITELKSKLQTL 517
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 117 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 176
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 177 LQVKVLSMSRLGGAGAVAPLVT 198
>gi|21554896|gb|AAM63723.1| unknown [Arabidopsis thaliana]
Length = 247
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SER RR ++N+RL +L+ +VPN K D+AS++ DA++Y++ L+++ + + A+ + +P
Sbjct: 58 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 117
Query: 142 FMSPSGHQSTEVPQISPNVPISPK--LGMGSGIGTGMVDVL 180
S S + + + VP++ K + SG T +++VL
Sbjct: 118 KSSLSFSKDFDRDLL---VPVTSKKMKQLDSGSSTSLIEVL 155
>gi|42573704|ref|NP_974948.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|8843817|dbj|BAA97365.1| unnamed protein product [Arabidopsis thaliana]
gi|332009472|gb|AED96855.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 226
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SER RR ++N+RL +L+ +VPN K D+AS++ DA++Y++ L+++ + + A+ + +P
Sbjct: 59 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
Query: 142 FMSPSGHQSTEVPQISPNVPISPK--LGMGSGIGTGMVDVL 180
S S + + + VP++ K + SG T +++VL
Sbjct: 119 KSSLSFSKDFDRDLL---VPVTSKKMKQLDSGSSTSLIEVL 156
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 120 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 179
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 180 LQVKVLSMSRLGGAGAVAPLVT 201
>gi|3757520|gb|AAC64222.1| bHLH transcription factor [Arabidopsis thaliana]
Length = 467
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
+ERRRR ++N RL +L+ LVP K DRAS+L DA+NYVK L+++
Sbjct: 214 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNE 258
>gi|449519422|ref|XP_004166734.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor MYC4-like
[Cucumis sativus]
Length = 686
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 482 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 541
Query: 119 YVKALRHQLE 128
Y+ LR +L+
Sbjct: 542 YINELRGKLQ 551
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 40/49 (81%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR+RIN+RLK L+ LVPN K D +++L++AV+YVK L+ Q+ ++S+
Sbjct: 229 RKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLSS 277
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 40/49 (81%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR+RIN+RLK L+ LVPN K D +++L++AV YVK L+ Q++++S+
Sbjct: 240 RKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 288
>gi|42573702|ref|NP_974947.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|16604348|gb|AAL24180.1| AT5g57150/MUL3_10 [Arabidopsis thaliana]
gi|332009471|gb|AED96854.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 219
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SER RR ++N+RL +L+ +VPN K D+AS++ DA++Y++ L+++ + + A+ + +P
Sbjct: 59 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
Query: 142 FMSPSGHQSTEVPQISPNVPISPK--LGMGSGIGTGMVDVL 180
S S + + + VP++ K + SG T +++VL
Sbjct: 119 KSSLSFSKDFDRDLL---VPVTSKKMKQLDSGSSTSLIEVL 156
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + + H+ +ER RR++I +R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 257 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 316
Query: 128 EM 129
E+
Sbjct: 317 EV 318
>gi|325514349|gb|ADZ24264.1| inducer of CBF expression 1 protein [Brassica rapa subsp.
campestris]
Length = 497
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL-----EMMSAQGGA 136
+ERRRR ++N RL L+ +VP +K DRAS+L DA++Y+K L ++ E+ S G+
Sbjct: 314 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPNGS 373
Query: 137 IFQSPFMSPSGHQSTEVPQ 155
+ P S S H T PQ
Sbjct: 374 L---PLASSSFHPLTPTPQ 389
>gi|45421752|emb|CAF74711.1| MYC transcription factor [Solanum tuberosum]
Length = 646
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ERKP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+
Sbjct: 454 ERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIA 513
Query: 119 YVKALRHQLE 128
Y+ L+ +++
Sbjct: 514 YINELKSKVQ 523
>gi|224126263|ref|XP_002329512.1| predicted protein [Populus trichocarpa]
gi|222870221|gb|EEF07352.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 45 LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKEL 100
L+ V +D++ + E E++P R ++ + H ++ER+RR+++N+R +L+ +
Sbjct: 418 LEASVVKEADSSRVVEP-EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 476
Query: 101 VPNCNKSDRASVLDDAVNYVKALRHQLE 128
VPN +K D+AS+L DA++Y+ L+ +L+
Sbjct: 477 VPNVSKMDKASLLGDAISYINELKTKLQ 504
>gi|12643064|gb|AAK00453.1|AC060755_23 putative MYC transcription factor [Oryza sativa Japonica Group]
Length = 688
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ LR +L +
Sbjct: 514 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTAL 565
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 132 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 191
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 192 LQVKVLSMSRLGGAGAVAPLVT 213
>gi|255555757|ref|XP_002518914.1| DNA binding protein, putative [Ricinus communis]
gi|223541901|gb|EEF43447.1| DNA binding protein, putative [Ricinus communis]
Length = 479
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 41/55 (74%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H ++ER+RR+R+N R +L+ +VPN +K D+AS+L DAV Y++ L+ +++ + Q
Sbjct: 306 HVEAERQRRERLNNRFYALRSVVPNVSKMDKASLLADAVTYIQELKAKVDELKTQ 360
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R + + H+ +ER RR++I++R+K L++LVP C+K +A +LD+ +NYV++L+ Q+
Sbjct: 266 RARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQV 325
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 326 EFLSMKLSAV 335
>gi|151383081|gb|ABS11038.1| MYC [Brassica oleracea var. gemmifera]
Length = 610
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 54 DATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
+A+ + E E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+
Sbjct: 410 EASVVKEIPEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDK 469
Query: 110 ASVLDDAVNYVKALRHQL 127
AS+L DA+ Y+ L+ ++
Sbjct: 470 ASLLGDAIAYINELKSKV 487
>gi|4218118|emb|CAA22972.1| putative protein [Arabidopsis thaliana]
gi|7269735|emb|CAB81468.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 71 KRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
KR+ +AE+HN +ERRRR++IN+++K+L++L+P CNK + D + L+ Q MM
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKVES----DSVSTLISLLKFQRWMM 307
>gi|356531417|ref|XP_003534274.1| PREDICTED: transcription factor ATR2-like [Glycine max]
Length = 658
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 457 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 516
Query: 119 YVKALRHQLEMM 130
Y+ L+ +L+ +
Sbjct: 517 YITELKSKLQTL 528
>gi|22325727|ref|NP_179283.2| transcription factor ABORTED MICROSPORES [Arabidopsis thaliana]
gi|218563495|sp|Q9ZVX2.2|AMS_ARATH RecName: Full=Transcription factor ABORTED MICROSPORES; AltName:
Full=Basic helix-loop-helix protein 21; Short=AtbHLH21;
Short=bHLH 21; AltName: Full=Transcription factor EN 48;
AltName: Full=bHLH transcription factor bHLH021
gi|330251459|gb|AEC06553.1| transcription factor ABORTED MICROSPORES [Arabidopsis thaliana]
Length = 571
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
+ERRRR ++N RL +L+ LVP K DRAS+L DA+NYVK L+++
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNE 362
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 127 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 186
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 187 LQVKVLSMSRLGGAGAVAPLVT 208
>gi|302398593|gb|ADL36591.1| BHLH domain class transcription factor [Malus x domestica]
Length = 531
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
+ERRRR ++N RL L+ +VP +K DRAS+L DA+ Y+K L ++ + + +I
Sbjct: 347 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINNLHNELESIPPGS 406
Query: 142 FMSPSG---HQSTEVPQISPN 159
++P+G H T P PN
Sbjct: 407 ALTPTGNTFHPLTPTPATLPN 427
>gi|115483616|ref|NP_001065478.1| Os10g0575000 [Oryza sativa Japonica Group]
gi|45477841|gb|AAS66204.1| MYC protein [Oryza sativa]
gi|78709042|gb|ABB48017.1| transcription factor MYC7E, putative, expressed [Oryza sativa
Japonica Group]
gi|113640010|dbj|BAF27315.1| Os10g0575000 [Oryza sativa Japonica Group]
Length = 699
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ LR +L +
Sbjct: 525 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTAL 576
>gi|414867852|tpg|DAA46409.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 705
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ LR +L
Sbjct: 528 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKL 576
>gi|4321762|gb|AAD15818.1| transcription factor MYC7E [Zea mays]
Length = 702
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ LR +L
Sbjct: 525 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKL 573
>gi|302398605|gb|ADL36597.1| BHLH domain class transcription factor [Malus x domestica]
Length = 709
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 60 EGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNY 119
EG R P+ SA H +ERRRR+++N+R L+ LVP K D+AS+L D + Y
Sbjct: 463 EGSTRLRKGTPQDELSAN-HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEY 521
Query: 120 VKALRHQLEMMSAQ 133
VK LR++++ + A+
Sbjct: 522 VKQLRNKIQDLEAR 535
>gi|356544676|ref|XP_003540773.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor FER-LIKE IRON
DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like [Glycine
max]
Length = 330
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
SERRRRDR+ ++L +L LVPN K D+AS++ DAV+Y+ L+ Q M+ A+
Sbjct: 141 SERRRRDRMKQKLYALWSLVPNITKMDKASIIGDAVSYMHELQAQANMLKAE 192
>gi|338192055|gb|AEI84807.1| bHLH transcription factor [Malus x domestica]
Length = 709
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D+ S + EG R P+ SA H +ERRRR+++N+R L+ LVP K D+
Sbjct: 453 DENSPKFQEGEGSTRLRKGTPQDELSAN-HVLAERRRREKLNERFIILRSLVPFVTKMDK 511
Query: 110 ASVLDDAVNYVKALRHQLEMMSAQ 133
AS+L D + YVK LR++++ + A+
Sbjct: 512 ASILGDTIEYVKQLRNKIQDLEAR 535
>gi|326527479|dbj|BAK08014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 618
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M +
Sbjct: 465 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITDLQKKLKDMETERERFL 524
Query: 139 QSPFMSP 145
+S + P
Sbjct: 525 ESGMVDP 531
>gi|15236692|ref|NP_193522.1| transcription factor MYC4 [Arabidopsis thaliana]
gi|75278047|sp|O49687.1|BH004_ARATH RecName: Full=Transcription factor MYC4; Short=AtMYC4; AltName:
Full=Basic helix-loop-helix protein 4; Short=AtbHLH4;
Short=bHLH 4; AltName: Full=Transcription factor EN 37;
AltName: Full=bHLH transcription factor bHLH004
gi|2894597|emb|CAA17131.1| bHLH protein-like [Arabidopsis thaliana]
gi|7268540|emb|CAB78790.1| bHLH protein-like [Arabidopsis thaliana]
gi|62320362|dbj|BAD94748.1| putative transcription factor BHLH4 [Arabidopsis thaliana]
gi|332658560|gb|AEE83960.1| transcription factor MYC4 [Arabidopsis thaliana]
Length = 589
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E+KP R ++ + H ++ER+RR+++N+R SL+ +VPN +K D+AS+L DA++
Sbjct: 397 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 456
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 457 YISELKSKLQ 466
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R+++L+ELVP+ NK+DRA++LD+ V+YVK LR
Sbjct: 127 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 186
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 187 LQVKVLSMSRLGGAGAVAPLVT 208
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 65 KPDNRPKRTH---SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
+P RP+R + S++ + R RR+R+++RL+ L+ LVP +K D A++LD+A +Y+K
Sbjct: 263 QPPQRPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLK 322
Query: 122 ALRHQLEMM 130
L+ QLE +
Sbjct: 323 FLKSQLEAL 331
>gi|152968456|gb|ABS50251.1| bHLH transcriptional factor [Malus x domestica]
Length = 531
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
+ERRRR ++N RL L+ +VP +K DRAS+L DA+ Y+K L ++ + + +I
Sbjct: 347 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINNLHNELESIPPGS 406
Query: 142 FMSPSG---HQSTEVPQISPN 159
++P+G H T P PN
Sbjct: 407 ALTPTGNTFHPLTPTPATLPN 427
>gi|255559983|ref|XP_002521010.1| DNA binding protein, putative [Ricinus communis]
gi|223539847|gb|EEF41427.1| DNA binding protein, putative [Ricinus communis]
Length = 503
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
ERKP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+
Sbjct: 338 ERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIT 397
Query: 119 YVKALRHQLEMMSAQ 133
Y+ L+ ++ ++ +
Sbjct: 398 YITDLQTKIRVLETE 412
>gi|334200176|gb|AEG74015.1| lMYC5 [Hevea brasiliensis]
Length = 475
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 43/59 (72%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H ++ER+RR R+N R +L+ +VPN +K D+AS+L DAV Y++ L+ +++ + A+ A+
Sbjct: 304 HVEAERQRRKRLNHRFYALRSVVPNVSKMDKASLLADAVTYIEELKAKVDELEAKLQAV 362
>gi|18026956|gb|AAL55711.1|AF251689_1 putative transcription factor BHLH4 [Arabidopsis thaliana]
Length = 589
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E+KP R ++ + H ++ER+RR+++N+R SL+ +VPN +K D+AS+L DA++
Sbjct: 397 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 456
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 457 YISELKSKLQ 466
>gi|376336994|gb|AFB33089.1| hypothetical protein 0_9408_01, partial [Pinus cembra]
gi|376336996|gb|AFB33090.1| hypothetical protein 0_9408_01, partial [Pinus cembra]
gi|376336998|gb|AFB33091.1| hypothetical protein 0_9408_01, partial [Pinus cembra]
gi|376337000|gb|AFB33092.1| hypothetical protein 0_9408_01, partial [Pinus cembra]
gi|376337002|gb|AFB33093.1| hypothetical protein 0_9408_01, partial [Pinus cembra]
Length = 151
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLK 95
++ HS D + F +A + +E++P R ++ + H ++ER+RR+++N+R
Sbjct: 18 ESDHS-DVEAASFKEANQAV--IEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY 74
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
+L+ +VPN +K D+AS+L DAV+Y+ L+ +++ + A+
Sbjct: 75 ALRAVVPNVSKMDKASLLGDAVSYISELQSRVQEIEAE 112
>gi|163311848|gb|ABY26937.1| putative anthocyanin transcriptional regulator [Ipomoea
hochstetteri]
Length = 683
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A G
Sbjct: 486 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARG 542
>gi|242040107|ref|XP_002467448.1| hypothetical protein SORBIDRAFT_01g028230 [Sorghum bicolor]
gi|241921302|gb|EER94446.1| hypothetical protein SORBIDRAFT_01g028230 [Sorghum bicolor]
Length = 709
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ LR +L
Sbjct: 532 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKL 580
>gi|297832282|ref|XP_002884023.1| hypothetical protein ARALYDRAFT_480571 [Arabidopsis lyrata subsp.
lyrata]
gi|297329863|gb|EFH60282.1| hypothetical protein ARALYDRAFT_480571 [Arabidopsis lyrata subsp.
lyrata]
Length = 571
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
+ERRRR ++N RL L+ LVP K DRAS+L DA+NYVK L+++
Sbjct: 318 AERRRRKKLNDRLYKLRSLVPTITKLDRASILGDAINYVKELQNE 362
>gi|163311838|gb|ABY26932.1| putative anthocyanin transcriptional regulator [Ipomoea coccinea]
Length = 661
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL-EMMSAQGGA 136
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR ++ E+ +A+G A
Sbjct: 464 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGSA 522
>gi|218185066|gb|EEC67493.1| hypothetical protein OsI_34761 [Oryza sativa Indica Group]
Length = 664
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ LR +L +
Sbjct: 490 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTAL 541
>gi|168025278|ref|XP_001765161.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683480|gb|EDQ69889.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 829
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 31 ASQLPTSWHQTSHSLDTDV----DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRR 86
A+ L + H +DT++ ++ +A ++ RKP N + + H Q+ER+R
Sbjct: 573 ANGLLLAGHLDQECVDTELITMKNNVVEAPKVPRKRGRKPANDREEPLN---HVQAERQR 629
Query: 87 RDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R+++NKR +L+ +VPN +K D+AS+L DA+ ++ L+ +L+
Sbjct: 630 REKLNKRFYALRAVVPNVSKMDKASLLGDAIAHINHLQEKLQ 671
>gi|163311836|gb|ABY26931.1| putative anthocyanin transcriptional regulator [Ipomoea quamoclit]
Length = 659
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGA 136
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A G+
Sbjct: 462 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEATRGS 519
>gi|332083019|gb|AEE00745.1| inducer of CBF expression [Brassica juncea]
Length = 438
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL-----EMMSAQGGA 136
+ERRRR ++N RL L+ +VP +K DRAS+L DA++Y+K L ++ E+ S G+
Sbjct: 256 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPNGS 315
Query: 137 IFQSPFMSPSGHQSTEVPQ 155
+ P S S H T PQ
Sbjct: 316 L---PLASSSFHPLTPTPQ 331
>gi|376337012|gb|AFB33098.1| hypothetical protein 0_9408_01, partial [Pinus mugo]
Length = 151
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLK 95
++ HS D + F +A + +E++P R ++ + H ++ER+RR+++N+R
Sbjct: 18 ESDHS-DVEAASFKEANQAV--IEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY 74
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
+L+ +VPN +K D+AS+L DAV+Y+ L+ +++ + A+
Sbjct: 75 ALRAVVPNVSKMDKASLLGDAVSYINELQSRVQEIEAE 112
>gi|376337004|gb|AFB33094.1| hypothetical protein 0_9408_01, partial [Pinus mugo]
gi|376337006|gb|AFB33095.1| hypothetical protein 0_9408_01, partial [Pinus mugo]
gi|376337008|gb|AFB33096.1| hypothetical protein 0_9408_01, partial [Pinus mugo]
gi|376337010|gb|AFB33097.1| hypothetical protein 0_9408_01, partial [Pinus mugo]
Length = 151
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLK 95
++ HS D + F +A + +E++P R ++ + H ++ER+RR+++N+R
Sbjct: 18 ESDHS-DVEAASFKEANQAV--IEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY 74
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
+L+ +VPN +K D+AS+L DAV+Y+ L+ +++ + A+
Sbjct: 75 ALRAVVPNVSKMDKASLLGDAVSYINELQSRVQEIEAE 112
>gi|361066789|gb|AEW07706.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
Length = 151
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLK 95
++ HS D + F +A + +E++P R ++ + H ++ER+RR+++N+R
Sbjct: 18 ESDHS-DVEAASFKEANQAV--IEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY 74
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
+L+ +VPN +K D+AS+L DAV+Y+ L+ +++ + A+
Sbjct: 75 ALRAVVPNVSKMDKASLLGDAVSYISELQSRVQEIEAE 112
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
+P+ +A +++ + RR+RI++R++ L+ LVP C+K + +A +LD+ +NYV++L++Q+
Sbjct: 62 KPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQV 121
Query: 128 EMMS 131
E +S
Sbjct: 122 EFLS 125
>gi|225436456|ref|XP_002272647.1| PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED
TRANSCRIPTION FACTOR [Vitis vinifera]
gi|297734900|emb|CBI17134.3| unnamed protein product [Vitis vinifera]
Length = 314
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SERRRR R+ ++L +L+ LVPN K D+AS++ DAV YV+ L+ Q + + A+ G + S
Sbjct: 131 SERRRRVRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQQLQMQAKKLKAEIGGLESSL 190
Query: 142 FMSPSGHQS-TEVPQ 155
+ + E+P+
Sbjct: 191 VLGAERYNGLVEIPK 205
>gi|426264530|gb|AFY17139.1| bHLH [Citrus trifoliata]
Length = 487
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 67 DNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
DN+ KR + +ERRRR ++N RL L+ +VP +K DRAS+L DA++Y+K L +
Sbjct: 293 DNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 352
Query: 127 L-----EMMSAQGGAIFQ 139
+ E+ S G++ Q
Sbjct: 353 INDLHNELESTPTGSLMQ 370
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R +R + H+ +ER RR++I+ R+K L+ LVP C++ + +A +L++ +NYVK+L+ Q+
Sbjct: 20 RARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQI 79
Query: 128 EMMSAQGGAI 137
E +S + A+
Sbjct: 80 EFLSMKLAAV 89
>gi|45421750|emb|CAF74710.1| MYC transcription factor [Solanum tuberosum]
Length = 692
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 45 LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKEL 100
L+ V +D++ + E E++P R ++ + H ++ER+RR+++N+R +L+ +
Sbjct: 481 LEASVVKEADSSRVVEP-EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 539
Query: 101 VPNCNKSDRASVLDDAVNYVKALRHQLE 128
VPN +K D+AS+L DA++Y+ L+ +L+
Sbjct: 540 VPNVSKMDKASLLGDAISYINELKSKLQ 567
>gi|357517063|ref|XP_003628820.1| Transcription factor MYC2 [Medicago truncatula]
gi|355522842|gb|AET03296.1| Transcription factor MYC2 [Medicago truncatula]
Length = 648
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Query: 54 DATEISEGMERK---PDNRPKRTHSAEV--------HNQSERRRRDRINKRLKSLKELVP 102
D + + EG + P RPK+ H ++ER+RR+++N++ +L+ +VP
Sbjct: 427 DVSAVKEGESSRVVEPGKRPKKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVP 486
Query: 103 NCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
N +K D+AS+L DA++Y+ L+ +L+ + + G +
Sbjct: 487 NGSKMDKASLLGDAISYINELKSKLQGLESSKGEL 521
>gi|47232560|dbj|BAD18983.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
gi|47232562|dbj|BAD18984.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
Length = 670
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGG 135
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A G
Sbjct: 473 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRVQELEAARG 529
>gi|449495155|ref|XP_004159750.1| PREDICTED: transcription factor MYC4-like [Cucumis sativus]
Length = 443
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 55 ATEISEGMERKPDNRPKRTHSAEV------HNQSERRRRDRINKRLKSLKELVPNCNKSD 108
+T+I+ + +K R + + E+ H ++ER+RR ++N+R +L+ +VPN +K D
Sbjct: 246 STKINSNVGKKRGKRSAKNNKTELSSLPVNHVEAERQRRQKLNQRFYALRSVVPNVSKMD 305
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQ 133
+AS+L DA Y+K L+ +++ + ++
Sbjct: 306 KASLLADAAEYIKELKSKVQKLESK 330
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 49/71 (69%)
Query: 60 EGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNY 119
+G E ++ +R ++ E + + + RR+RI++RL++L+ELVP+ K D ++LD A++Y
Sbjct: 181 QGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISY 240
Query: 120 VKALRHQLEMM 130
VK ++ QL ++
Sbjct: 241 VKFMQMQLRVL 251
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 6 SVASGDSEKGQSSRNENSFDFLESSASQLPTSWHQTSHSLDTDVDDFSDATEISEGMERK 65
++A G G S+ E + + + + LP S + L + + + E ++ +
Sbjct: 321 AIAYGPPFVGMSTSGEMATLAIPNPTAFLPGSAANVAPLLFSTPLTLPNVPSMEEIVQLR 380
Query: 66 PDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRH 125
P R R S + + + R RR+RI+ R++ L+ VP K D AS+LD+A++YVK L+
Sbjct: 381 PKRRNVRI-SKDPQSVAARHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQ 439
Query: 126 QLEMMSAQG 134
QL+ + G
Sbjct: 440 QLQTLERIG 448
>gi|449530935|ref|XP_004172447.1| PREDICTED: transcription factor AIG1-like [Cucumis sativus]
Length = 239
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 36 TSWHQTSHSLDTDVDDFSDA-TEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRL 94
+SW + H+ D S A I + + K + ++ H ++ERRRR RIN L
Sbjct: 12 SSWSLSYHNADNLKPSMSTAGCSIVDNAADASKDVKKSSEASRSHKEAERRRRQRINSHL 71
Query: 95 KSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ------GGAIFQSPF 142
+L+ L+PN K+D+AS+L + V++VK LR + ++ + GG + PF
Sbjct: 72 STLRTLLPNTTKTDKASLLAEVVSHVKELRRRATEVARRSTEQSGGGGMVSWPF 125
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 49/71 (69%)
Query: 60 EGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNY 119
+G E ++ +R ++ E + + + RR+RI++RL++L+ELVP+ K D ++LD A++Y
Sbjct: 181 QGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISY 240
Query: 120 VKALRHQLEMM 130
VK ++ QL ++
Sbjct: 241 VKFMQMQLRVL 251
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 6/72 (8%)
Query: 70 PKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEM 129
P T + + + + + RR+RI++RL++L+ELVPN K D ++L+ A++YVK L+ Q+++
Sbjct: 209 PSTTPTKDPQSLAAKNRRERISERLRTLQELVPNGTKVDLVTMLEKAISYVKFLQLQVKV 268
Query: 130 MS------AQGG 135
++ AQGG
Sbjct: 269 LATDEFWPAQGG 280
>gi|225470922|ref|XP_002264409.1| PREDICTED: transcription factor bHLH13 [Vitis vinifera]
Length = 608
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 42/55 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M ++
Sbjct: 439 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITELQKKLKDMESE 493
>gi|224994136|dbj|BAH28881.1| bHLH transcription factor LjTT8 [Lotus japonicus]
Length = 678
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A+ I
Sbjct: 473 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEARNLQI 531
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A+
Sbjct: 464 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEAR 518
>gi|10998404|gb|AAG25927.1|AF260918_1 anthocyanin 1 [Petunia x hybrida]
gi|10998406|gb|AAG25928.1|AF260919_1 anthocyanin 1 [Petunia x hybrida]
Length = 668
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQG 134
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A+
Sbjct: 476 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLEARA 531
>gi|149347186|gb|ABR23669.1| Myc2 bHLH protein [Vitis vinifera]
Length = 608
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 42/55 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M ++
Sbjct: 439 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITELQKKLKDMESE 493
>gi|168015644|ref|XP_001760360.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688374|gb|EDQ74751.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 542
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 62 MERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVK 121
M +P K T + H +ER+RR+++++R +L +VP K D+ASVL DA+ YVK
Sbjct: 215 MPTQPPPPVKSTGHTQDHIMAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYVK 274
Query: 122 ALRHQLEMM 130
L +L+ M
Sbjct: 275 TLEEKLKTM 283
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 15/80 (18%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK---------------SDRASVL 113
R +R + + H+ +ER RR++I++R+K L++LVP CNK + +A +L
Sbjct: 146 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVML 205
Query: 114 DDAVNYVKALRHQLEMMSAQ 133
D+ +NYV++L+ Q+E +S +
Sbjct: 206 DEIINYVQSLQRQVEFLSMK 225
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R +R + + + R RR++IN+RLK+L+ LVPN K D ++LD+A++YV+ L+ Q+
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVT 502
Query: 129 MMSAQGGAIFQSP 141
++ + ++ +P
Sbjct: 503 LLKSDEYWMYATP 515
>gi|414864922|tpg|DAA43479.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 423
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
Query: 51 DFSDATEISEGMERKPDNRPKR-THSAEVHNQSERRRRDRINKRLKSLKELVPNCNK 106
+ ++TE ++ +R N PKR T +AEVHN SERRRRDRI ++++ L+EL+P+CNK
Sbjct: 366 ECEESTEETKPWQR---NGPKRRTRAAEVHNLSERRRRDRIKEKMRVLQELIPHCNK 419
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 86 RRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSPFMS 144
RR++I++R+K L++LVP CNK +A VLD+ +NY+++L+HQ+E +S + A+ ++
Sbjct: 158 RREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANLN 217
Query: 145 PS 146
P+
Sbjct: 218 PT 219
>gi|172034194|gb|ACB69502.1| ICE87 [Triticum aestivum]
Length = 443
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+ERRRR ++N RL +L+ +VP +K DRAS+L DA+ Y+K L+ ++ ++
Sbjct: 261 AERRRRKKLNDRLYALRSVVPRISKMDRASILGDAIEYLKELKQKINVL 309
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 64 RKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL 123
+K R R + E + R+RR+RIN+RL+ L+ LVPN K D +++L++A YVK L
Sbjct: 190 KKTCARASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFL 249
Query: 124 RHQLEMMSA 132
+ Q++++S
Sbjct: 250 QLQIKLLSC 258
>gi|296278608|gb|ADH04268.1| MYC1b transcription factor [Nicotiana tabacum]
gi|316930967|gb|ADU60100.1| MYC2a transcription factor [Nicotiana tabacum]
Length = 679
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 65 KPDNRPKRTHSAEV--------HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDA 116
+P+ RPK+ H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA
Sbjct: 478 EPEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 537
Query: 117 VNYVKALRHQLE 128
++Y+ L+ +L+
Sbjct: 538 ISYINELKLKLQ 549
>gi|168008699|ref|XP_001757044.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691915|gb|EDQ78275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 187
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
+ER+RR ++N+RL SL+ LVP K DRAS+L DA+ YVK L+ Q++
Sbjct: 34 AERKRRKKLNERLYSLRALVPKITKMDRASILGDAIEYVKELQQQVK 80
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R + + H+ +ER RR++I++R+K L++LVP C+K +A +LD+ +NYV++L+ Q+
Sbjct: 264 RARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQV 323
Query: 128 EMMS 131
E +S
Sbjct: 324 EFLS 327
>gi|334200174|gb|AEG74014.1| lMYC4 [Hevea brasiliensis]
Length = 470
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 44/59 (74%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H ++ER+RR+R+N R +L+ +VPN +K D+AS+L DAV Y++ L+ +++ + ++ A+
Sbjct: 301 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIEELKAKVDELESKLQAV 359
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R++SL+ELVP NK+DRA+++D+ V+YVK LR
Sbjct: 141 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 201 LQVKVLSMSRLGGAGAVAPLVT 222
>gi|413955100|gb|AFW87749.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 703
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++Y+ LR +L
Sbjct: 524 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKL 572
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Query: 61 GMERKPDNRPKRTH---SAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAV 117
G+E + +PKR + S++ + R+RR+RI+ R++ L+++VP +K D AS+LD+A
Sbjct: 376 GLEEVAE-KPKRKNVKISSDPQTVAARQRRERISDRIRVLQKIVPGGSKMDTASMLDEAA 434
Query: 118 NYVKALRHQLEMMSAQGGAI 137
NY+K LR Q++ + + G +
Sbjct: 435 NYLKFLRSQVKALESLGNKV 454
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 65 KPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALR 124
+P R +R + + H+ +ER RR+RI +R++SL+ELVP NK+DRA+++D+ V+YVK LR
Sbjct: 136 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 195
Query: 125 HQLEM--MSAQGGAIFQSPFMS 144
Q+++ MS GGA +P ++
Sbjct: 196 LQVKVLSMSRLGGAGAVAPLVT 217
>gi|384248993|gb|EIE22476.1| hypothetical protein COCSUDRAFT_47901 [Coccomyxa subellipsoidea
C-169]
Length = 295
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 31/129 (24%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL-EMMSAQGG-- 135
H +E+RRR RIN+RL L+++VP+ +++ AS L++ + Y++ L+ ++ E+ A GG
Sbjct: 115 HQAAEQRRRTRINERLDRLRQVVPHAERANTASFLEEVITYIQGLQKRIAELEQAAGGGQ 174
Query: 136 ----------AIFQSPFMS-------PSGHQSTEVPQISPNVPISPKLGMGSGIGT-GMV 177
A +P M+ P QS EVP +P G G G G +
Sbjct: 175 VIAQPTIAQPATTSAPLMAQAGFTAVPRAAQSAEVP--------APAANHGHGAGAQGPL 226
Query: 178 DVL--FSWS 184
D FS+S
Sbjct: 227 DARDKFSFS 235
>gi|296278606|gb|ADH04267.1| MYC1a transcription factor [Nicotiana tabacum]
gi|316930969|gb|ADU60101.1| MYC2b transcription factor [Nicotiana tabacum]
gi|316930971|gb|ADU60102.1| MYC2c transcription factor [Nicotiana tabacum]
Length = 681
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 65 KPDNRPKRTHSAEV--------HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDA 116
+P+ RPK+ H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA
Sbjct: 480 EPEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 539
Query: 117 VNYVKALRHQLE 128
++Y+ L+ +L+
Sbjct: 540 ISYINELKLKLQ 551
>gi|356502813|ref|XP_003520210.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 646
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A+
Sbjct: 456 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEAR 510
>gi|356528396|ref|XP_003532789.1| PREDICTED: transcription factor GLABRA 3-like [Glycine max]
Length = 630
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 40/54 (74%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H SERRRR ++N+R +L+ +VP+ +K D+ S+LDDA++Y+K L +++ + A
Sbjct: 433 HVMSERRRRAKLNERFLTLRSMVPSISKDDKVSILDDAIDYLKKLERRVKELEA 486
>gi|326509515|dbj|BAJ91674.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527957|dbj|BAJ89030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 40 QTSHS-LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRL 94
++ HS L+ V + + + E++P R ++ + H ++ER+RR+++N+R
Sbjct: 463 ESDHSDLEASVREVESSRVVPPPEEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRF 522
Query: 95 KSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+L+ +VPN +K D+AS+L DA++Y+ LR ++ +
Sbjct: 523 YALRAVVPNVSKMDKASLLGDAISYINELRGKMTAL 558
>gi|326499408|dbj|BAJ86015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 40 QTSHS-LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRL 94
++ HS L+ V + + + E++P R ++ + H ++ER+RR+++N+R
Sbjct: 463 ESDHSDLEASVREVESSRVVPPPEEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRF 522
Query: 95 KSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+L+ +VPN +K D+AS+L DA++Y+ LR ++ +
Sbjct: 523 YTLRAVVPNVSKMDKASLLGDAISYINELRGKMTAL 558
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKS-DRASVLDDAVNYVKALRHQL 127
R + + H+ +ER RR++I++R+K L++LVP C+K +A +LD+ +NYV++L+ Q+
Sbjct: 264 RARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQV 323
Query: 128 EMMS 131
E +S
Sbjct: 324 EFLS 327
>gi|51702428|gb|AAU08787.1| bHLH transcription factor [Triticum aestivum]
Length = 292
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M +
Sbjct: 170 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITDLQKKLKDMETERERFL 229
Query: 139 QSPFMSP 145
+S + P
Sbjct: 230 ESGMVDP 236
>gi|33339705|gb|AAQ14332.1|AF283507_1 MYC2 [Catharanthus roseus]
Length = 699
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 497 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 556
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 557 YINELKAKLQ 566
>gi|357147532|ref|XP_003574381.1| PREDICTED: transcription factor MYC4-like [Brachypodium distachyon]
Length = 706
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 40 QTSHS-LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRL 94
++ HS L+ V + + + E++P R ++ + H ++ER+RR+++N+R
Sbjct: 486 ESDHSDLEASVREVESSRVVPPPEEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRF 545
Query: 95 KSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+L+ +VPN +K D+AS+L DA++Y+ LR ++ +
Sbjct: 546 YALRAVVPNVSKMDKASLLGDAISYINELRGKMTAL 581
>gi|361066791|gb|AEW07707.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163401|gb|AFG64433.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163402|gb|AFG64434.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163403|gb|AFG64435.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163404|gb|AFG64436.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163405|gb|AFG64437.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163406|gb|AFG64438.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163407|gb|AFG64439.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163408|gb|AFG64440.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163409|gb|AFG64441.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163410|gb|AFG64442.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163411|gb|AFG64443.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163412|gb|AFG64444.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163413|gb|AFG64445.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
gi|383163414|gb|AFG64446.1| Pinus taeda anonymous locus 0_9408_01 genomic sequence
Length = 151
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Query: 40 QTSHSLDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLK 95
++ HS D + F +A + +E++P R ++ + H ++ER+RR+++N+R
Sbjct: 18 ESDHS-DVEAASFKEANQAV--IEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY 74
Query: 96 SLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
+L+ +VPN +K D+AS+L DAV Y+ L+ +++ + A+
Sbjct: 75 ALRAVVPNVSKMDKASLLGDAVAYINELQSRVQEIEAE 112
>gi|223702414|gb|ACN21638.1| putative basic helix-loop-helix protein BHLH22 [Lotus japonicus]
Length = 641
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E++P R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 438 EKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 497
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 498 YITELKTKLQ 507
>gi|326504380|dbj|BAJ91022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 40 QTSHS-LDTDVDDFSDATEISEGMERKPDNRPKRTHSAEV----HNQSERRRRDRINKRL 94
++ HS L+ V + + + E++P R ++ + H ++ER+RR+++N+R
Sbjct: 463 ESDHSDLEASVREVESSRVVPPPEEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRF 522
Query: 95 KSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
+L+ +VPN +K D+AS+L DA++Y+ LR ++ +
Sbjct: 523 YALRAVVPNVSKMDKASLLGDAISYINELRGKMTAL 558
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 42/49 (85%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR++IN+RL++L+ LVPN K D +++L+DA++YVK L+ Q++++S+
Sbjct: 200 RKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLSS 248
>gi|357485243|ref|XP_003612909.1| BHLH transcription factor [Medicago truncatula]
gi|355514244|gb|AES95867.1| BHLH transcription factor [Medicago truncatula]
Length = 677
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Query: 63 ERKPDNRPKRTHSAEV----HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVN 118
E+KP R ++ + H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA++
Sbjct: 474 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIS 533
Query: 119 YVKALRHQLE 128
Y+ L+ +L+
Sbjct: 534 YITELKTKLQ 543
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 42/49 (85%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR++IN+RL++L+ LVPN K D +++L+DA++YVK L+ Q++++S+
Sbjct: 214 RKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQIKLLSS 262
>gi|326492952|dbj|BAJ90332.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQL 127
+ERRRR ++N RL L+ +VP +K DRAS+L DA+ Y+K L H++
Sbjct: 340 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLHKI 385
>gi|414591460|tpg|DAA42031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 519
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 67 DNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
D + KR + +ERRRR ++N RL L+ +VP +K DRAS+L DA+ Y+K L +
Sbjct: 312 DGKGKRKRLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLRK 371
Query: 127 LE 128
+E
Sbjct: 372 IE 373
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 65 KPDN----RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK------SDRASVLD 114
KPD R +R + + H+ +ER RR++I RL+ L++LVP C K A +LD
Sbjct: 141 KPDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLD 200
Query: 115 DAVNYVKALRHQLEMMSAQGGA 136
+ +NYV +L++Q+E +S + A
Sbjct: 201 EIINYVHSLQNQVEFLSRELAA 222
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALR 124
R +R + + H+ +ER RR+RI++R+K L+ LVP CNK + +A +LD+ +NYV++L+
Sbjct: 151 RARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|334188452|ref|NP_001190556.1| transcription factor bHLH35 [Arabidopsis thaliana]
gi|332009473|gb|AED96856.1| transcription factor bHLH35 [Arabidopsis thaliana]
Length = 264
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIFQSP 141
SER RR ++N+RL +L+ +VPN K D+AS++ DA++Y++ L+++ + + A+ + +P
Sbjct: 59 SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 118
Query: 142 FMSPSGHQSTEVPQISPNVPISPK--LGMGSGIGTGMVDVL 180
S S + + + VP++ K + SG T +++VL
Sbjct: 119 KSSLSFSKDFDRDLL---VPVTSKKMKQLDSGSSTSLIEVL 156
>gi|158515837|gb|ABW69686.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 662
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A
Sbjct: 468 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 521
>gi|356560147|ref|XP_003548357.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 618
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMM 130
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M
Sbjct: 452 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINQLQAKLKTM 503
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 50 DDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDR 109
D S + S+ + R R + + + R+RR+RIN+RL+ L+ LVPN K D
Sbjct: 247 DSSSKEDDASKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDI 306
Query: 110 ASVLDDAVNYVKALRHQLEMMSA 132
+++L++AV+YVK L+ Q++++S+
Sbjct: 307 STMLEEAVHYVKFLQLQIKLLSS 329
>gi|158515839|gb|ABW69687.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A
Sbjct: 470 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 523
>gi|47232558|dbj|BAD18982.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
gi|125659425|dbj|BAF46858.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 665
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A
Sbjct: 471 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 524
>gi|359806583|ref|NP_001241268.1| transcription factor ICE1-like [Glycine max]
gi|318056131|gb|ADV36252.1| ICEa [Glycine max]
Length = 450
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 67 DNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQ 126
DN+ KR + +ERRRR ++N RL L+ +VP +K DRAS+L DA++Y+K L +
Sbjct: 251 DNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 310
Query: 127 L 127
+
Sbjct: 311 I 311
>gi|225453582|ref|XP_002266775.1| PREDICTED: transcription factor MYC2-like [Vitis vinifera]
Length = 497
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 55 ATEISEGMERKPDNRPKRTHSAEV-HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVL 113
A + + + +K +P+ A + H ++ER+RR+++N R +L+ +VPN ++ D+AS+L
Sbjct: 291 AVTVEKRVPKKRGRKPRLGRDAPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLL 350
Query: 114 DDAVNYVKALRHQLEMMSAQ 133
DAV+Y+ L+ +++ + +Q
Sbjct: 351 ADAVSYINELKAKVDELESQ 370
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++AV YVK L+ Q++
Sbjct: 265 RASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIK 324
Query: 129 MMSAQ 133
++S++
Sbjct: 325 LLSSE 329
>gi|296278595|gb|ADH04262.1| bHLH1 transcription factor [Nicotiana benthamiana]
Length = 680
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 65 KPDNRPKRTHSAEV--------HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDA 116
+P+ RPK+ H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA
Sbjct: 479 EPEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 538
Query: 117 VNYVKALRHQLE 128
++Y+ L+ +L+
Sbjct: 539 ISYINELKLKLQ 550
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 41/49 (83%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR+RIN+RLK L+ L+PN K D +++L++AV+YVK L+ Q++++S+
Sbjct: 248 RKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 296
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 42/49 (85%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR++IN+RLK+L+ LVPN K D +++L++AV+YVK L+ Q++++S+
Sbjct: 183 RKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 231
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNK-SDRASVLDDAVNYVKALRHQL 127
R + + H+ +E+ RR++I++R+K L++LVP C+K + +A +LD+ +NYV++L+ Q+
Sbjct: 149 RARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQV 208
Query: 128 EMMS 131
E +S
Sbjct: 209 EFLS 212
>gi|332801231|gb|AEE99257.1| anthocyanin 1a [Nicotiana tabacum]
Length = 671
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 49 VDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSD 108
VD S A+ +G P H +ERRRR+++N+R L+ LVP K D
Sbjct: 451 VDSSSTASRFRKGCSITSQEEPSGNHVL-----AERRRREKLNERFIILRSLVPFVTKMD 505
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQG 134
+AS+L D + YVK LR +++ + A+
Sbjct: 506 KASILGDTIEYVKQLRKKVQDLEARA 531
>gi|125659430|dbj|BAF46859.1| bHLH transcription activator Ivory seed [Ipomoea purpurea]
Length = 664
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A
Sbjct: 470 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 523
>gi|357138511|ref|XP_003570835.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor ABORTED
MICROSPORES-like [Brachypodium distachyon]
Length = 582
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
+ER+RR ++N RL L+ LVPN K DRAS+L DA++Y+ L+ Q++
Sbjct: 321 AERKRRKKLNDRLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVK 367
>gi|357128971|ref|XP_003566142.1| PREDICTED: transcription factor bHLH3-like [Brachypodium
distachyon]
Length = 617
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAIF 138
H ++ER+RR+++N+R +L+ +VPN +K D+AS+L DA+ Y+ L+ +L+ M +
Sbjct: 464 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITDLQKKLKDMETERERFL 523
Query: 139 QSPFMSP 145
+S P
Sbjct: 524 ESGMADP 530
>gi|332801235|gb|AEE99259.1| anthocyanin 1-like protein [Nicotiana sylvestris]
Length = 671
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 49 VDDFSDATEISEGMERKPDNRPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSD 108
VD S A+ +G P H +ERRRR+++N+R L+ LVP K D
Sbjct: 451 VDSSSTASRFRKGCSITSQEEPSGNHVL-----AERRRREKLNERFIILRSLVPFVTKMD 505
Query: 109 RASVLDDAVNYVKALRHQLEMMSAQG 134
+AS+L D + YVK LR +++ + A+
Sbjct: 506 KASILGDTIEYVKQLRKKVQDLEARA 531
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 41/49 (83%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR+RIN+RLK L+ L+PN K D +++L++AV+YVK L+ Q++++S+
Sbjct: 248 RKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 296
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 41/49 (83%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR+RIN+RLK L+ L+PN K D +++L++AV+YVK L+ Q++++S+
Sbjct: 248 RKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 296
>gi|158515841|gb|ABW69688.1| anthocyanin synthesis regulatory protein [Ipomoea purpurea]
Length = 664
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A
Sbjct: 471 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 524
>gi|356520239|ref|XP_003528771.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 464
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 41/55 (74%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
H ++ER+RR+++N R +L+ +VPN ++ D+AS+L DAV Y+ L+ ++E + +Q
Sbjct: 287 HVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYISELKAKIEYLESQ 341
>gi|97974133|dbj|BAE94394.1| bHLH transcriptional factor [Ipomoea nil]
Length = 669
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A
Sbjct: 476 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 529
>gi|224087273|ref|XP_002308110.1| predicted protein [Populus trichocarpa]
gi|222854086|gb|EEE91633.1| predicted protein [Populus trichocarpa]
Length = 248
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 82 SERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKAL-----RHQLEMMSAQGGA 136
SER RR R+N+RL +L+ +VPN +K D+AS++ DA++Y++ L R Q E++ + G
Sbjct: 58 SERNRRKRLNERLFALRAVVPNISKMDKASIIKDAIDYIQELHKQERRIQAEILELESGK 117
Query: 137 IFQSP 141
+ + P
Sbjct: 118 LKKDP 122
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 46/64 (71%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++AV+YVK L+ Q++
Sbjct: 288 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIK 347
Query: 129 MMSA 132
++S+
Sbjct: 348 LLSS 351
>gi|301072754|gb|ADK56287.1| LMYC1 [Hevea brasiliensis]
Length = 476
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 42/59 (71%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQGGAI 137
H ++ER+RR+R+N R +L+ VPN +K D+AS+L DAV Y+K L+ ++ + ++ A+
Sbjct: 307 HVEAERQRRERLNHRFYALRSAVPNVSKMDKASLLADAVTYIKELKATVDELQSKLEAV 365
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 42/49 (85%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
R+RR++IN+RLK+L+ LVPN K D +++L++AV+YVK L+ Q++++S+
Sbjct: 183 RKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 231
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 41/50 (82%)
Query: 84 RRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSAQ 133
R+RR+RIN+RL+ L+ LVPN K D +++L++AV YVK L+ Q++++S++
Sbjct: 240 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSE 289
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 46/64 (71%)
Query: 69 RPKRTHSAEVHNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLE 128
R R + + + R+RR+RIN+RL+ L+ LVPN K D +++L++AV+YVK L+ Q++
Sbjct: 288 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIK 347
Query: 129 MMSA 132
++S+
Sbjct: 348 LLSS 351
>gi|163311834|gb|ABY26930.1| putative anthocyanin transcriptional regulator [Ipomoea alba]
Length = 671
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 79 HNQSERRRRDRINKRLKSLKELVPNCNKSDRASVLDDAVNYVKALRHQLEMMSA 132
H +ERRRR+++N+R L+ LVP K D+AS+L D + YVK LR +++ + A
Sbjct: 474 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEA 527
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.126 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,186,086,560
Number of Sequences: 23463169
Number of extensions: 131361604
Number of successful extensions: 360691
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3315
Number of HSP's successfully gapped in prelim test: 3051
Number of HSP's that attempted gapping in prelim test: 355964
Number of HSP's gapped (non-prelim): 6683
length of query: 201
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 66
effective length of database: 9,191,667,552
effective search space: 606650058432
effective search space used: 606650058432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 73 (32.7 bits)