BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044345
(103 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 4 LWKGGKGVEFVDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
L K K VD L ++ + +++ALLC Q +P +RP M EV ML+ +
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 4 LWKGGKGVEFVDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
L K K VD L ++ + +++ALLC Q +P +RP M EV ML+ +
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M LE+ +C Q NP RPS LE+ S +K E
Sbjct: 241 MEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M LE+ +C Q NP RPS LE+ S +K E
Sbjct: 239 MEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLEIISSIKEE 282
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NPN RP+ LE+ ++LK++
Sbjct: 261 RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NPN RP+ LE+ ++LK++
Sbjct: 260 RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NPN RP+ LE+ ++LK++
Sbjct: 260 RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2XIO|A Chain A, Structure Of Putative Deoxyribonuclease Tatdn1 Isoform A
Length = 301
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 18 LDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNETTNINTP 65
L DRN PC +++ LEI E+P LE+++ L N T + P
Sbjct: 251 LKDRNEPCHIIQILEIMSAVRDEDP------LELANTLYNNTIKVFFP 292
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 248 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 245 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 241 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 276 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 319
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 244 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 247 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 248 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 291
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 254 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 254 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 14 VDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
++ L D+ C M E+ +C Q NP RPS LE+ S +K E
Sbjct: 247 MEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NP RP+ LE+ ++LK++
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NP RP+ LE+ ++LK++
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NP RP+ LE+ ++LK++
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NP RP+ LE+ ++LK++
Sbjct: 259 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 58
R ++ +C Q NP RP+ LE+ ++LK++
Sbjct: 257 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 1 AYELWKGGKGVEFVDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 51
A E G+ + VD +L D+ P L + + A+ C+ + DRPSM +V
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 1 AYELWKGGKGVEFVDSSLDDRNSPCKLMRCLEIALLCVQENPNDRPSMLEV 51
A E G+ + VD +L D+ P L + + A+ C+ + DRPSM +V
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLK 56
+ E+ C Q NP+DRPS E+ +
Sbjct: 447 KVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 238 KVYELMRACWQWNPSDRPSFAEIHQAFET 266
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 238 KVYELMRACWQWNPSDRPSFAEIHQAFET 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 238 KVYELMRACWQWNPSDRPSFAEIHQAFET 266
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 244 KVYELMRACWQWNPSDRPSFAEIHQAFET 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEIHQAFET 270
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 253 KVYELMRACWQWNPSDRPSFAEIHQAFET 281
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEIHQAFET 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEIHQAFET 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 29 RCLEIALLCVQENPNDRPSMLEVSSMLKN 57
+ E+ C Q NP+DRPS E+ +
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 29 RCLEIALLCVQENPNDRPSMLEV 51
+ E+ C Q NP+DRPS E+
Sbjct: 486 KVYELMRACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 29 RCLEIALLCVQENPNDRPSMLEV 51
+ E+ C Q NP+DRPS E+
Sbjct: 444 KVYELMRACWQWNPSDRPSFAEI 466
>pdb|2ZTJ|A Chain A, Crystal Structure Of Homocitrate Synthase From Thermus
Thermophilus Complexed With Alpha-Ketoglutarate
pdb|2ZTK|A Chain A, Crystal Structure Of Homocitrate Synthase From Thermus
Thermophilus Complexed With Homocitrate
pdb|2ZYF|A Chain A, Crystal Structure Of Homocitrate Synthase From Thermus
Thermophilus Complexed With Magnesuim Ion And
Alpha-Ketoglutarate
Length = 382
Score = 25.4 bits (54), Expect = 8.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 58 ETTNINTPKKPAFSKQVDEIGIELLSTT 85
E N +T K +K +DE GIE + T
Sbjct: 18 EKANFSTQDKVEIAKALDEFGIEYIEVT 45
>pdb|3A9I|A Chain A, Crystal Structure Of Homocitrate Synthase From Thermus
Thermophilus Complexed With Lys
Length = 376
Score = 25.4 bits (54), Expect = 8.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 58 ETTNINTPKKPAFSKQVDEIGIELLSTT 85
E N +T K +K +DE GIE + T
Sbjct: 18 EKANFSTQDKVEIAKALDEFGIEYIEVT 45
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,919,921
Number of Sequences: 62578
Number of extensions: 94820
Number of successful extensions: 229
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 178
Number of HSP's gapped (non-prelim): 52
length of query: 103
length of database: 14,973,337
effective HSP length: 68
effective length of query: 35
effective length of database: 10,718,033
effective search space: 375131155
effective search space used: 375131155
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)