Query 044346
Match_columns 159
No_of_seqs 123 out of 1459
Neff 9.7
Searched_HMMs 29240
Date Tue Mar 26 00:12:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 2.9E-24 1E-28 142.7 14.4 129 6-142 3-135 (136)
2 2fk9_A Protein kinase C, ETA t 99.9 3.6E-24 1.2E-28 145.5 13.3 123 6-136 22-156 (157)
3 2ep6_A MCTP2 protein; beta san 99.9 5.4E-24 1.9E-28 141.0 13.9 123 3-136 3-131 (133)
4 2dmh_A Myoferlin; beta-sandwic 99.9 1.2E-23 3.9E-28 140.5 15.4 124 7-139 1-135 (140)
5 3kwu_A MUNC13-1; calcium bindi 99.9 2.1E-23 7E-28 140.6 16.5 119 7-136 11-146 (148)
6 1gmi_A Protein kinase C, epsil 99.9 2.5E-23 8.5E-28 138.4 12.8 118 10-137 3-133 (136)
7 3b7y_A E3 ubiquitin-protein li 99.9 9.2E-23 3.2E-27 138.1 14.7 127 8-137 15-153 (153)
8 2r83_A Synaptotagmin-1; C2A-C2 99.9 2.4E-22 8.3E-27 148.5 16.8 133 11-154 17-163 (284)
9 3m7f_B E3 ubiquitin-protein li 99.9 3.4E-22 1.2E-26 138.3 14.5 127 9-138 4-142 (176)
10 1rlw_A Phospholipase A2, CALB 99.9 2.1E-22 7.1E-27 132.0 11.5 114 12-135 2-123 (126)
11 2nq3_A Itchy homolog E3 ubiqui 99.9 9.8E-22 3.3E-26 135.7 13.5 124 10-138 33-162 (173)
12 3pyc_A E3 ubiquitin-protein li 99.9 2.6E-21 9E-26 127.9 15.1 115 12-135 4-131 (132)
13 1dqv_A Synaptotagmin III; beta 99.9 4.4E-21 1.5E-25 142.7 15.6 135 10-154 17-165 (296)
14 2b3r_A Phosphatidylinositol-4- 99.9 9.3E-21 3.2E-25 125.7 12.0 105 10-124 17-131 (134)
15 3rdl_A Protein kinase C alpha 99.8 1.2E-20 3.9E-25 125.3 9.4 107 11-127 14-128 (137)
16 1a25_A CALB, protein kinase C 99.8 8.1E-21 2.8E-25 128.0 8.0 108 12-129 30-145 (149)
17 1rsy_A Synaptotagmin I; calciu 99.8 3.8E-20 1.3E-24 125.1 11.3 104 11-123 40-150 (152)
18 3f04_A Synaptotagmin-1; C2A, c 99.8 2E-20 6.9E-25 125.1 9.7 103 11-122 32-141 (143)
19 2d8k_A Synaptotagmin VII; exoc 99.8 6.2E-20 2.1E-24 122.5 12.0 104 11-123 24-135 (141)
20 3jzy_A Intersectin 2; C2 domai 99.8 2.1E-19 7.3E-24 142.3 15.7 122 10-136 384-507 (510)
21 3fbk_A RGS3, RGP3, regulator o 99.8 8.3E-20 2.8E-24 123.6 10.8 109 10-127 24-141 (153)
22 2chd_A Rabphilin-3A, exophilin 99.8 8.8E-20 3E-24 121.9 10.3 94 11-104 27-130 (142)
23 3fdw_A Synaptotagmin-like prot 99.8 9E-20 3.1E-24 122.7 10.1 104 11-123 21-134 (148)
24 1v27_A Regulating synaptic mem 99.8 7.7E-20 2.6E-24 121.9 9.5 107 11-127 19-137 (141)
25 2bwq_A Regulating synaptic mem 99.8 1.4E-19 4.9E-24 118.9 10.6 92 11-102 16-119 (129)
26 2z0u_A WW domain-containing pr 99.8 3.6E-20 1.2E-24 125.7 7.8 91 11-101 41-141 (155)
27 2q3x_A Regulating synaptic mem 99.8 9.7E-20 3.3E-24 125.5 10.0 104 11-123 28-139 (171)
28 1rh8_A Piccolo protein; beta-s 99.8 2.8E-20 9.6E-25 124.3 6.9 103 12-123 17-138 (142)
29 1wfm_A Synaptotagmin XIII; C2 99.8 3.7E-19 1.3E-23 118.4 12.3 102 11-124 24-133 (138)
30 3l9b_A Otoferlin; C2-domain, b 99.8 5.5E-19 1.9E-23 116.4 12.8 120 11-140 19-143 (144)
31 1ugk_A Synaptotagmin IV, KIAA1 99.8 7E-19 2.4E-23 117.0 12.5 92 11-102 20-120 (138)
32 2enp_A B/K protein; C2 type 1, 99.8 3E-19 1E-23 120.0 9.6 93 11-103 24-130 (147)
33 2dmg_A KIAA1228 protein; beta- 99.8 4.6E-19 1.6E-23 118.4 10.3 103 11-123 22-135 (142)
34 2cjt_A UNC-13 homolog A, MUNC1 99.8 1.4E-18 4.9E-23 114.7 11.8 87 12-103 4-91 (131)
35 1tjx_A Similar to synaptotagmi 99.8 6.5E-19 2.2E-23 119.8 10.3 91 11-101 23-122 (159)
36 3n5a_A Synaptotagmin-7; calciu 99.8 1.2E-18 4.2E-23 115.5 10.3 93 10-102 13-114 (138)
37 2cm5_A Rabphilin-3A; protein t 99.8 1.9E-18 6.5E-23 118.3 11.0 92 11-102 35-135 (166)
38 1w15_A Synaptotagmin IV; metal 99.8 3.7E-18 1.3E-22 115.3 10.8 89 11-99 28-125 (153)
39 2cjs_A UNC-13 homolog A, MUNC1 99.8 1.7E-17 5.9E-22 113.7 13.1 89 10-103 11-100 (167)
40 3nsj_A Perforin-1; pore formin 99.8 2.1E-17 7.3E-22 131.3 14.7 111 12-139 393-506 (540)
41 1cjy_A CPLA2, protein (cytosol 99.7 2.8E-16 9.4E-21 128.6 10.3 104 10-123 15-126 (749)
42 1djx_A PLC-D1, phosphoinositid 99.7 1.8E-15 6.1E-20 122.4 14.7 114 11-136 495-623 (624)
43 2r83_A Synaptotagmin-1; C2A-C2 99.7 1.1E-15 3.9E-20 112.6 11.4 92 11-102 148-248 (284)
44 3bxj_A RAS GTPase-activating p 99.6 1.3E-16 4.4E-21 125.8 0.8 90 10-103 8-105 (483)
45 1dqv_A Synaptotagmin III; beta 99.6 7.3E-16 2.5E-20 114.5 4.3 92 11-102 150-250 (296)
46 3pfq_A PKC-B, PKC-beta, protei 99.5 1E-13 3.4E-18 113.4 9.9 92 12-103 171-270 (674)
47 2enj_A NPKC-theta, protein kin 99.5 1.2E-12 4.1E-17 85.0 12.5 120 6-136 3-129 (138)
48 1yrk_A NPKC-delta, protein kin 99.5 4.4E-12 1.5E-16 81.3 14.0 115 11-136 4-124 (126)
49 3qr0_A Phospholipase C-beta (P 99.3 1.8E-11 6.3E-16 101.2 13.9 109 12-139 649-773 (816)
50 3ohm_B 1-phosphatidylinositol- 99.3 1.5E-11 5E-16 102.4 12.3 111 12-139 724-847 (885)
51 2zkm_X 1-phosphatidylinositol- 99.3 4.2E-11 1.4E-15 99.2 13.1 85 11-102 676-771 (799)
52 2yrb_A Protein fantom; beta sa 95.7 0.22 7.5E-06 33.1 10.1 123 9-139 14-152 (156)
53 3f04_A Synaptotagmin-1; C2A, c 93.9 0.1 3.4E-06 33.6 4.8 29 124-154 18-47 (143)
54 2z0u_A WW domain-containing pr 93.7 0.098 3.3E-06 34.6 4.5 29 124-154 27-56 (155)
55 2cm5_A Rabphilin-3A; protein t 93.6 0.11 3.8E-06 34.4 4.8 29 124-154 21-50 (166)
56 1rsy_A Synaptotagmin I; calciu 93.4 0.13 4.5E-06 33.5 4.8 29 124-154 26-55 (152)
57 3l4c_A Dedicator of cytokinesi 93.3 1.5 5E-05 30.8 11.7 55 45-99 78-139 (220)
58 2wxf_A Phosphatidylinositol-4, 93.0 0.77 2.6E-05 39.1 9.7 90 10-101 214-325 (940)
59 3hhm_A Phosphatidylinositol-4, 92.0 2 6.7E-05 37.2 11.0 92 10-102 352-457 (1091)
60 1e7u_A Phosphatidylinositol 3- 87.5 5.7 0.00019 34.0 10.3 92 11-102 216-332 (961)
61 2y3a_A Phosphatidylinositol-4, 82.9 1.3 4.5E-05 38.3 4.5 89 11-101 351-471 (1092)
62 2xzz_A Protein-glutamine gamma 29.4 94 0.0032 18.6 6.8 31 124-154 60-91 (102)
63 2kzb_A Autophagy-related prote 22.8 96 0.0033 18.6 3.2 40 57-99 7-46 (118)
64 4e0e_A Putative uncharacterize 20.8 1.3E+02 0.0045 20.2 3.9 39 116-157 22-60 (178)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.92 E-value=2.9e-24 Score=142.74 Aligned_cols=129 Identities=21% Similarity=0.266 Sum_probs=110.3
Q ss_pred ccCcccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEEeeccc-CCCCCccccEEEEEeeCCCCcEEEEEEEccC
Q 044346 6 KGRRTSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKENIKIRFIG-NNVNPEWNEVFPFSTTYPNVPIMLSVCDHDS 83 (159)
Q Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~~~~t~~~~-~~~~P~w~e~~~~~~~~~~~~l~~~v~d~~~ 83 (159)
.+...+.+.|+|+|++|++|+..+ .+.+||||.+.+....++|+++. ++.||.|+|.|.|.+......|.|+|||++.
T Consensus 3 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 3 SGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV 82 (136)
T ss_dssp CCCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS
T ss_pred CCCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC
Confidence 345668899999999999999999 88999999999998889999998 8999999999999998777899999999999
Q ss_pred CCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeec--CCCcccEEEEEEEEEeCCCCC
Q 044346 84 FTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKL--TNIECGKLQVQLRYCNLPGSK 142 (159)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l--~~~~~G~l~l~l~~~~~~~~~ 142 (159)
+++|++||++.++|.++...... ...|+.+ .....|+|+|+++|.+...+.
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~~--------~~~w~~L~~~~~~~G~i~l~l~~~p~~~~~ 135 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGSI--------PPTAYNVVKDEEYKGEIWVALSFKPSGPSS 135 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSEE--------EEEEEEEEETTEEEEEEEEEEEEEECCSCC
T ss_pred CCCCceEEEEEEEHHHhccCCCC--------CcEEEEeecCCccCEEEEEEEEEEeCCCCC
Confidence 99999999999999998553321 1456554 346789999999999765443
No 2
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.92 E-value=3.6e-24 Score=145.46 Aligned_cols=123 Identities=19% Similarity=0.186 Sum_probs=101.9
Q ss_pred ccCcccceEEEEEEEEeeCCCCCC-C----------CCCCcEEEEEECCeE-EEeecccCCCCCccccEEEEEeeCCCCc
Q 044346 6 KGRRTSLLSLRLRIKQGVNLAIHD-H----------SGSDPCVFVMMAKEN-IKIRFIGNNVNPEWNEVFPFSTTYPNVP 73 (159)
Q Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~~-~----------~~~dpy~~v~~~~~~-~~t~~~~~~~~P~w~e~~~~~~~~~~~~ 73 (159)
.++....|.|+|+|++|++|++++ . +.+||||++.++... .+|+++.+|+||.|||+|.|.+.. ...
T Consensus 22 ~~~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~ 100 (157)
T 2fk9_A 22 SGTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGH 100 (157)
T ss_dssp --CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECE
T ss_pred chhccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCE
Confidence 355677899999999999999887 3 568999999998655 699999999999999999999874 568
Q ss_pred EEEEEEEccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEEEEEEEEE
Q 044346 74 IMLSVCDHDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKLQVQLRYC 136 (159)
Q Consensus 74 l~~~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l~l~l~~~ 136 (159)
|.|+|||++.+++|++||.+.++|+++..+.. ++. ..+.|+++. +.|+|+|+++|.
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~----~~~-~~~~W~~L~--~~G~i~l~l~~~ 156 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLRTTG----ASD-TFEGWVDLE--PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHHHHT----TCS-EEEEEEECB--SSCEEEEEEEEC
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhcccC----CCC-cccEEEECC--CCcEEEEEEEEE
Confidence 99999999999999999999999999876410 001 227899884 599999999873
No 3
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.92 E-value=5.4e-24 Score=141.02 Aligned_cols=123 Identities=19% Similarity=0.296 Sum_probs=107.2
Q ss_pred cccccCcccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEEeecccCCCCCccccEEEEEeeCCCCcEEEEEEEc
Q 044346 3 VADKGRRTSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKENIKIRFIGNNVNPEWNEVFPFSTTYPNVPIMLSVCDH 81 (159)
Q Consensus 3 ~~~~~~~~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~~~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~d~ 81 (159)
....+.....+.|.|+|.+|++|+..+ .+.+||||.+.+....++|+++.++.||.|+|.|.|.+......|.|+|||+
T Consensus 3 ~~s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~ 82 (133)
T 2ep6_A 3 SGSSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDE 82 (133)
T ss_dssp SCCCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEE
T ss_pred cccccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEEC
Confidence 344566778999999999999999999 8899999999999999999999999999999999999987778999999999
Q ss_pred cCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecC-----CCcccEEEEEEEEE
Q 044346 82 DSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLT-----NIECGKLQVQLRYC 136 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~-----~~~~G~l~l~l~~~ 136 (159)
+.+++|++||++.+++.++..+. ..|+.+. ....|+|+|+++|+
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~-----------~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQ-----------PNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSC-----------CEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCC-----------ceEEEeecCCCCCccceEEEEEEEEE
Confidence 99988999999999999975421 2455553 24789999999987
No 4
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.92 E-value=1.2e-23 Score=140.49 Aligned_cols=124 Identities=22% Similarity=0.341 Sum_probs=104.5
Q ss_pred cCcccceEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEEeecccCCCCCccccEEEEEeeCC----CCcEEEEEEEcc
Q 044346 7 GRRTSLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAKENIKIRFIGNNVNPEWNEVFPFSTTYP----NVPIMLSVCDHD 82 (159)
Q Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~~~~~t~~~~~~~~P~w~e~~~~~~~~~----~~~l~~~v~d~~ 82 (159)
|.....+.|.|+|++|++|+..+.+.+||||++.+....++|+++.++.||.|||.|.|.+..+ ...|.|+|||++
T Consensus 1 g~s~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 1 GSSGSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp CCSCBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCCCCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 3456788999999999999988777899999999998899999999999999999999998753 578999999999
Q ss_pred CCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEee---cCC----CcccEEEEEEEEEeCC
Q 044346 83 SFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLK---LTN----IECGKLQVQLRYCNLP 139 (159)
Q Consensus 83 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~---l~~----~~~G~l~l~l~~~~~~ 139 (159)
.+++|++||++.++|.++...... +.|+. +.+ ...|+|+|+++|.+.+
T Consensus 81 ~~~~~~~lG~~~i~l~~l~~~~~~---------~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 81 TIGQNKLIGTATVALKDLTGDQSR---------SLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp CSSSCCCCEEEEEEGGGTCSSSCE---------EEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred CCCCCceEEEEEEEHHHhccCCCc---------eeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 999999999999999997654332 44543 322 3569999999998654
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.92 E-value=2.1e-23 Score=140.55 Aligned_cols=119 Identities=24% Similarity=0.348 Sum_probs=102.0
Q ss_pred cCcccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEEeecccCCCCCccccEEEEEeeCCCCcEEEEEEEccCC-
Q 044346 7 GRRTSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKENIKIRFIGNNVNPEWNEVFPFSTTYPNVPIMLSVCDHDSF- 84 (159)
Q Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~~~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~d~~~~- 84 (159)
|+....+.|.|+|++|++|+..+ .+.+||||.+.++...++|+++.++.||.|+|.|.|.+..+...|.|+|||++..
T Consensus 11 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 11 GTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp ----CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 56677899999999999999999 8999999999999999999999999999999999999987788999999999986
Q ss_pred ----------CCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC-----CcccEEEEEEEEE
Q 044346 85 ----------TKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN-----IECGKLQVQLRYC 136 (159)
Q Consensus 85 ----------~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~-----~~~G~l~l~l~~~ 136 (159)
++|++||++.++|.++.. . .+.|+.+.. ...|+|+|+++|.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~~--~---------~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLSG--E---------MDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCCS--E---------EEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccccCCCCccEEEEEEEHHHCcC--C---------CCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 789999999999999732 1 155776642 3679999999884
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.91 E-value=2.5e-23 Score=138.40 Aligned_cols=118 Identities=17% Similarity=0.177 Sum_probs=100.0
Q ss_pred ccceEEEEEEEEeeCCCCCC-CCC-----------CCcEEEEEECCeE-EEeecccCCCCCccccEEEEEeeCCCCcEEE
Q 044346 10 TSLLSLRLRIKQGVNLAIHD-HSG-----------SDPCVFVMMAKEN-IKIRFIGNNVNPEWNEVFPFSTTYPNVPIML 76 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~-~~~-----------~dpy~~v~~~~~~-~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~ 76 (159)
...|.|.|+|++|++|++++ .+. +||||++.++... .+|+++.++.||.|||.|.|.+... ..|.|
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~ 81 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIEL 81 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEE
T ss_pred ccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEE
Confidence 45789999999999999888 544 9999999998654 5888999999999999999998755 89999
Q ss_pred EEEEccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEEEEEEEEEe
Q 044346 77 SVCDHDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKLQVQLRYCN 137 (159)
Q Consensus 77 ~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l~l~l~~~~ 137 (159)
+|||++.+++|++||.+.+++.++..++.. ..+.|+.+ .+.|+|+|+++|..
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~-------~~~~w~~L--~~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGSR-------HFEDWIDL--EPEGKVYVIIDLSG 133 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTCS-------EEEEEEEC--BSSCEEEEEEEEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCCC-------CccEEEEc--CCCeEEEEEEEEEe
Confidence 999999999999999999999997753221 12678877 45899999999974
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.90 E-value=9.2e-23 Score=138.06 Aligned_cols=127 Identities=23% Similarity=0.361 Sum_probs=98.9
Q ss_pred CcccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC------eEEEeecccCCCCCccccEEEEEeeCCCCcEEEEEEE
Q 044346 8 RRTSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAK------ENIKIRFIGNNVNPEWNEVFPFSTTYPNVPIMLSVCD 80 (159)
Q Consensus 8 ~~~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~------~~~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~d 80 (159)
.....+.|+|+|++|++|+..+ .+.+||||++.+.. ..++|+++.++.||.|||.|.|.+......|.|+|||
T Consensus 15 ~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d 94 (153)
T 3b7y_A 15 DEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFD 94 (153)
T ss_dssp CCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEE
Confidence 3556789999999999999999 88999999999872 5779999999999999999999998777899999999
Q ss_pred ccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC-----CcccEEEEEEEEEe
Q 044346 81 HDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN-----IECGKLQVQLRYCN 137 (159)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~-----~~~G~l~l~l~~~~ 137 (159)
++.+++|++||++.++|.++....... . ......|+.+.. ...|+|+|+++|+|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~-~--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRL-E--RPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTS-C--CCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcc-c--ccccccccccccccCCCCcceEEEEEEEEeC
Confidence 999999999999999999987643210 0 001135666632 46799999999973
No 8
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.90 E-value=2.4e-22 Score=148.47 Aligned_cols=133 Identities=25% Similarity=0.376 Sum_probs=114.7
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---CeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEccC
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA---KENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDHDS 83 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~---~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~~~ 83 (159)
..+.|.|+|++|++|+.++ .+.+||||++.+. ...++|+++.++.||.|||.|.|.+... ...|.|+|||++.
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~ 96 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR 96 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC
Confidence 5679999999999999999 8999999999985 4578999999999999999999998653 4689999999999
Q ss_pred CCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC------CcccEEEEEEEEEeCCCCCce-EEEEEecccc
Q 044346 84 FTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN------IECGKLQVQLRYCNLPGSKGF-IMFYECSSLC 154 (159)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~------~~~G~l~l~l~~~~~~~~~~l-~~~~~~~~l~ 154 (159)
+++|++||++.++|.++..+... +.|+.+.. ...|+|.+.++|. +..+.+ +.|++|+||.
T Consensus 97 ~~~~~~lG~~~i~l~~l~~~~~~---------~~w~~L~~~~~~~~~~~G~i~l~l~~~--p~~~~l~v~v~~a~~L~ 163 (284)
T 2r83_A 97 FSKHDIIGEFKVPMNTVDFGHVT---------EEWRDLQSAEKEEQEKLGDICFSLRYV--PTAGKLTVVILEAKNLK 163 (284)
T ss_dssp SSCCCEEEEEEEEGGGCCCSSCE---------EEEEECBCCSSCCCCCCCEEEEEEEEE--TTTTEEEEEEEEEESCC
T ss_pred CCCCceeEEEEEcchhcccCCcc---------eeEEEeeccccccccccccEEEEEEec--CcCCceEEEEEEeECCC
Confidence 99999999999999997654322 56776632 3579999999998 667889 9999999995
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.89 E-value=3.4e-22 Score=138.31 Aligned_cols=127 Identities=23% Similarity=0.355 Sum_probs=96.5
Q ss_pred cccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC------eEEEeecccCCCCCccccEEEEEeeCCCCcEEEEEEEc
Q 044346 9 RTSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAK------ENIKIRFIGNNVNPEWNEVFPFSTTYPNVPIMLSVCDH 81 (159)
Q Consensus 9 ~~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~------~~~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~d~ 81 (159)
....+.|.|+|++|++|+.++ .+.+||||++.+.. ..++|+++.++.||.|+|.|.|.+......|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 456789999999999999999 89999999999873 67899999999999999999999987778999999999
Q ss_pred cCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC-----CcccEEEEEEEEEeC
Q 044346 82 DSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN-----IECGKLQVQLRYCNL 138 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~-----~~~G~l~l~l~~~~~ 138 (159)
+.+++|++||++.++|.++....... + ......|+.+.. ...|+|+|+++|.+.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~-~--~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRM-E--RPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC---------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcc-c--ccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 99999999999999999987642210 0 000024665532 458999999999854
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.89 E-value=2.1e-22 Score=132.03 Aligned_cols=114 Identities=17% Similarity=0.306 Sum_probs=95.8
Q ss_pred ceEEEEEEEEeeCCCCC---C-CCCCCcEEEEEECC---eEEEeecccCCCCCccccEEEEEeeCC-CCcEEEEEEEccC
Q 044346 12 LLSLRLRIKQGVNLAIH---D-HSGSDPCVFVMMAK---ENIKIRFIGNNVNPEWNEVFPFSTTYP-NVPIMLSVCDHDS 83 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~---~-~~~~dpy~~v~~~~---~~~~t~~~~~~~~P~w~e~~~~~~~~~-~~~l~~~v~d~~~ 83 (159)
.+.|.|+|++|++|+.+ + .+.+||||++.+.. ..++|+++.++.||.|||.|.|.+..+ ...|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 57899999999999985 5 68999999999983 788999999999999999999998644 6789999999998
Q ss_pred CCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEEEEEEEE
Q 044346 84 FTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKLQVQLRY 135 (159)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l~l~l~~ 135 (159)
+ +|++||++.++|.++..+... ..|+.+.+...|.|+++++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~---------~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKK---------EVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEE---------EEEEEETTTEEEEEEEEEEC
T ss_pred C-CCceeEEEEEEHHHccCCCcE---------EEEEEcCCCceEEEEEEEEe
Confidence 8 489999999999997654333 77888877666666666544
No 11
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.88 E-value=9.8e-22 Score=135.72 Aligned_cols=124 Identities=23% Similarity=0.290 Sum_probs=100.8
Q ss_pred ccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEEeecccCCCCCccccEEEEEeeCCCCcEEEEEEEccCCCCCC
Q 044346 10 TSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKENIKIRFIGNNVNPEWNEVFPFSTTYPNVPIMLSVCDHDSFTKDD 88 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~~~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~d~~~~~~d~ 88 (159)
...+.|.|+|++|++|+..+ .+.+||||++.++...++|+++.+++||.|||.|.|.+. +...|.|+|||++.+++|+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCc
Confidence 35778999999999999444 556999999999999999999999999999999999986 5889999999999999999
Q ss_pred ccEEEEEeCccchhhcccCCCCCceeeeEEeecCC-----CcccEEEEEEEEEeC
Q 044346 89 RMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN-----IECGKLQVQLRYCNL 138 (159)
Q Consensus 89 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~-----~~~G~l~l~l~~~~~ 138 (159)
+||++.++|.++......... ...+|+.+.. ...|+|.+.++|++.
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~----~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLE----EVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEES----SEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcc----eeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 999999999998764221110 0134555532 357999999999864
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.88 E-value=2.6e-21 Score=127.86 Aligned_cols=115 Identities=19% Similarity=0.291 Sum_probs=93.2
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--CeEEEeecccCCCCCccccEEEEEeeCCCCcEEEEEEEccCCCC--
Q 044346 12 LLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA--KENIKIRFIGNNVNPEWNEVFPFSTTYPNVPIMLSVCDHDSFTK-- 86 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~--~~~~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~d~~~~~~-- 86 (159)
...|+|+|++|++|+.++ .+.+||||++.+. ...++|+++.+++||.|+|.|.|.+.... .|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQ 82 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSST
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCC
Confidence 357999999999999999 8999999999997 47889999999999999999999988654 59999999999876
Q ss_pred -CCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC-------CcccEEEEEEEE
Q 044346 87 -DDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN-------IECGKLQVQLRY 135 (159)
Q Consensus 87 -d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~-------~~~G~l~l~l~~ 135 (159)
|++||++.++++++...... + ..|+.+.. ...|+|+|++++
T Consensus 83 ~d~~lG~~~i~l~~l~~~~~~----~----~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAISRLKDT----G----YQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTEEEEEEECHHHHHHHTTS----C----CEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCceEEEEEeHHHhhccccc----C----cEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 89999999999987442211 0 12333321 358999999875
No 13
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.87 E-value=4.4e-21 Score=142.73 Aligned_cols=135 Identities=25% Similarity=0.380 Sum_probs=109.6
Q ss_pred ccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEE---CCeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEcc
Q 044346 10 TSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMM---AKENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDHD 82 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~---~~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~~ 82 (159)
...+.|.|+|++|++|+.++ .+.+||||++++ +...++|+++.++.||.|+|.|.|.+... ...|.|+|||++
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 35678999999999999999 899999999998 46788999999999999999999998643 358999999999
Q ss_pred CCCCCCccEEEEEe-CccchhhcccCCCCCceeeeEEeecC-----CCcccEEEEEEEEEeCCCCCce-EEEEEecccc
Q 044346 83 SFTKDDRMKDAKID-IREYMKDVKINLEPRNAVKDLDLKLT-----NIECGKLQVQLRYCNLPGSKGF-IMFYECSSLC 154 (159)
Q Consensus 83 ~~~~d~~lG~~~i~-l~~l~~~~~~~~~~~~~~~~~~~~l~-----~~~~G~l~l~l~~~~~~~~~~l-~~~~~~~~l~ 154 (159)
.+++|++||++.++ +.++...... ...|+.+. ....|+|.+.++|. +..+.+ +.|++|+||.
T Consensus 97 ~~~~~~~iG~~~i~~l~~~~~~~~~--------~~~w~~L~~~~~~~~~~G~i~vsl~y~--~~~~~l~v~v~~a~~L~ 165 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLELAEQPPD--------RPLWRDILEGGSEKADLGELNFSLCYL--PTAGLLTVTIIKASNLK 165 (296)
T ss_dssp SSSCCCEEEEEECCCTTGGGSSCSS--------CCCCEECBCCSSCCSCCCEEEEEEEEE--TTTTEEEEEEEEEESCC
T ss_pred CCCCCceEEEEEeccccccccCCcc--------ceeeeccccccccccccceEEEEEEec--cccceeEEEEEEeecCC
Confidence 99999999999985 4443321100 03354442 24579999999998 667888 9999999994
No 14
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.85 E-value=9.3e-21 Score=125.66 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=89.2
Q ss_pred ccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEEeecccCCCCCccccEEEEE-eeC---CCCcEEEEEE
Q 044346 10 TSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMM-----AKENIKIRFIGNNVNPEWNEVFPFS-TTY---PNVPIMLSVC 79 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~-----~~~~~~t~~~~~~~~P~w~e~~~~~-~~~---~~~~l~~~v~ 79 (159)
...+.|.|+|++|++|+. + .+.+||||++++ ....++|+++.+++||.|||.|.|. +.. ....|.|+||
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~ 95 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVL 95 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEE
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEE
Confidence 346789999999999997 6 889999999998 3567899999999999999999999 664 3579999999
Q ss_pred EccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCC
Q 044346 80 DHDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNI 124 (159)
Q Consensus 80 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~ 124 (159)
|++.++++++||++.++|.++..+... +.|+.+.+.
T Consensus 96 d~d~~~~~~~lG~~~i~l~~l~~~~~~---------~~W~~L~~~ 131 (134)
T 2b3r_A 96 SAESLRENFFLGGITLPLKDFNLSKET---------VKWYQLTAA 131 (134)
T ss_dssp ECCSSSCCEEEEEEEEEGGGSCTTSCE---------EEEEECBC-
T ss_pred ECCCCCCCcEEEEEEEEhhhccCCCCc---------ceeEECCCc
Confidence 999999999999999999997653333 678887654
No 15
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.84 E-value=1.2e-20 Score=125.32 Aligned_cols=107 Identities=28% Similarity=0.375 Sum_probs=92.2
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEEeecccCCCCCccccEEEEEeeCC--CCcEEEEEEEcc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMM-----AKENIKIRFIGNNVNPEWNEVFPFSTTYP--NVPIMLSVCDHD 82 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~-----~~~~~~t~~~~~~~~P~w~e~~~~~~~~~--~~~l~~~v~d~~ 82 (159)
..+.|.|+|++|++|+..+ .+.+||||.+.+ ....++|+++.++.||.|+|.|.|.+... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 4689999999999999999 889999999999 46788999999999999999999998754 357999999999
Q ss_pred CCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCccc
Q 044346 83 SFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECG 127 (159)
Q Consensus 83 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G 127 (159)
.++++++||++.++|.++...+ . +.|+.+.+...|
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~---------~~W~~L~~~~~g 128 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-A---------SGWYKLLNQEEG 128 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-E---------EEEEECBCHHHH
T ss_pred CCCCCceEEEEEEeHHHhccCc-c---------CceEECcCcccc
Confidence 9999999999999999987632 2 678887654444
No 16
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=8.1e-21 Score=128.00 Aligned_cols=108 Identities=28% Similarity=0.348 Sum_probs=92.5
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC-----CeEEEeecccCCCCCccccEEEEEeeCC--CCcEEEEEEEccC
Q 044346 12 LLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA-----KENIKIRFIGNNVNPEWNEVFPFSTTYP--NVPIMLSVCDHDS 83 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~-----~~~~~t~~~~~~~~P~w~e~~~~~~~~~--~~~l~~~v~d~~~ 83 (159)
.+.|.|+|++|++|+..+ .+.+||||++.+. ...++|+++.++.||.|+|+|.|.+... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 568999999999999999 8899999999986 4678999999999999999999998764 4589999999999
Q ss_pred CCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEE
Q 044346 84 FTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKL 129 (159)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l 129 (159)
++++++||++.++|.++.... .+.|+.+.+...|++
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~~----------~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKAG----------VDGWFKLLSQEEGEY 145 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTCC----------EEEEEECBCHHHHTT
T ss_pred CCCCCEEEEEEEEHHHhCcCc----------cCCeEEccCCCCCcc
Confidence 999999999999999976531 167888866555543
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=3.8e-20 Score=125.10 Aligned_cols=104 Identities=25% Similarity=0.350 Sum_probs=89.7
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---CeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEccC
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA---KENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDHDS 83 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~---~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~~~ 83 (159)
..+.|.|+|++|++|+..+ .+.+||||++.+. ...++|+++.++.||.|||.|.|.+... ...|.|+|||++.
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 4678999999999999999 8899999999984 5678999999999999999999987643 5789999999999
Q ss_pred CCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC
Q 044346 84 FTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN 123 (159)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 123 (159)
++++++||++.++|.++..+... +.|+.+.+
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~~~~---------~~W~~L~~ 150 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFGHVT---------EEWRDLQS 150 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCSSCE---------EEEEECBC
T ss_pred CCCCcEEEEEEEEchhccCCCCc---------ceEEECCC
Confidence 99999999999999997543322 67887754
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.83 E-value=2e-20 Score=125.14 Aligned_cols=103 Identities=25% Similarity=0.353 Sum_probs=89.5
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEE---CCeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEccC
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMM---AKENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDHDS 83 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~---~~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~~~ 83 (159)
..+.|.|+|++|++|+..+ .+.+||||++.+ ....++|+++.++.||.|+|.|.|.+... ...|.|+|||++.
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 5678999999999999999 889999999998 35688999999999999999999997643 4789999999999
Q ss_pred CCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecC
Q 044346 84 FTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLT 122 (159)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~ 122 (159)
+++|++||++.++|.++...... +.|+.+.
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~~~---------~~W~~L~ 141 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGHVT---------EEWRDLQ 141 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTSCE---------EEEEECB
T ss_pred CCCCceEEEEEEEHHHccCCCCc---------ceEEECc
Confidence 99999999999999997654333 6677764
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=6.2e-20 Score=122.53 Aligned_cols=104 Identities=24% Similarity=0.369 Sum_probs=89.1
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC---CeEEEeecccCCCCCccccEEEEEeeC----CCCcEEEEEEEcc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA---KENIKIRFIGNNVNPEWNEVFPFSTTY----PNVPIMLSVCDHD 82 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~---~~~~~t~~~~~~~~P~w~e~~~~~~~~----~~~~l~~~v~d~~ 82 (159)
..+.|.|+|++|++|+..+ .+.+||||++.+. ...++|+++.++.||.|||.|.|.+.. ....|.|+|||++
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 4678999999999999999 8899999999984 467899999999999999999998532 2578999999999
Q ss_pred CCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC
Q 044346 83 SFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN 123 (159)
Q Consensus 83 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 123 (159)
.++++++||++.++|.++...... +.|+.+..
T Consensus 104 ~~~~~~~iG~~~i~l~~l~~~~~~---------~~W~~L~~ 135 (141)
T 2d8k_A 104 RFSRNDPIGEVSIPLNKVDLTQMQ---------TFWKDLKP 135 (141)
T ss_dssp SSSSCEEEEEEEEETTTSCTTSCE---------EEEECCEE
T ss_pred CCCCCcEEEEEEEEhhhhcCCCCc---------cEEEECcC
Confidence 999999999999999997654322 67887743
No 20
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.83 E-value=2.1e-19 Score=142.34 Aligned_cols=122 Identities=19% Similarity=0.293 Sum_probs=104.8
Q ss_pred ccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEEeecccCCCCCccccEEEEEeeCC-CCcEEEEEEEccCCCCC
Q 044346 10 TSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKENIKIRFIGNNVNPEWNEVFPFSTTYP-NVPIMLSVCDHDSFTKD 87 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~~~~t~~~~~~~~P~w~e~~~~~~~~~-~~~l~~~v~d~~~~~~d 87 (159)
...+.|.|+|++|++|+..+ .+.+||||.+.++...++|+++.++.||.|+|.|.|.+... ...|.|+|||++.+++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 35688999999999999999 89999999999999999999999999999999999998765 46799999999999999
Q ss_pred CccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEEEEEEEEE
Q 044346 88 DRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKLQVQLRYC 136 (159)
Q Consensus 88 ~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l~l~l~~~ 136 (159)
++||++.+++.++..+..... ....|+.+.+...|+|+|++++.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~-----~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKG-----PMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHC-----SCCEEEECBSSSSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCC-----ceeeeecCCCCCCceEEEEEEEE
Confidence 999999999999887543110 01568888888899999998764
No 21
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.82 E-value=8.3e-20 Score=123.60 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=89.8
Q ss_pred ccceEEEEEEEEeeCCCCCCCCCCCcEEEEEEC-----CeEEEeecccCCCCCccccEEEEEeeC--CCCcEEEEEEEcc
Q 044346 10 TSLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMA-----KENIKIRFIGNNVNPEWNEVFPFSTTY--PNVPIMLSVCDHD 82 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~-----~~~~~t~~~~~~~~P~w~e~~~~~~~~--~~~~l~~~v~d~~ 82 (159)
...+.|.|+|++|++|+..+.+.+||||++.+. ...++|+++.++.||.|||.|.|.+.. ....|.|+|||++
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 103 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA 103 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCC
Confidence 346789999999999999887789999999983 457899999999999999999999843 3457999999999
Q ss_pred CCCC-CCccEEEEEeCccchh-hcccCCCCCceeeeEEeecCCCccc
Q 044346 83 SFTK-DDRMKDAKIDIREYMK-DVKINLEPRNAVKDLDLKLTNIECG 127 (159)
Q Consensus 83 ~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~~~~~~~~~~l~~~~~G 127 (159)
.+++ |++||++.++|.++.. .... ..|+.+.+...|
T Consensus 104 ~~~~~d~~lG~~~i~l~~l~~~~~~~---------~~W~~L~~~~~g 141 (153)
T 3fbk_A 104 SQSRQSGLIGCMSFGVKSLLTPDKEI---------SGWYYLLGEHLG 141 (153)
T ss_dssp SSGGGCEEEEEEEEEHHHHTC--CCE---------EEEEECBCTTGG
T ss_pred CCCCCCcEEEEEEEEHHHhcCCCCcc---------ccEEECCChhhc
Confidence 9876 8999999999999764 2222 678888654443
No 22
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.82 E-value=8.8e-20 Score=121.88 Aligned_cols=94 Identities=21% Similarity=0.422 Sum_probs=83.4
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEEeecccCCCCCccccEEEEE-eeCC---CCcEEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAK-----ENIKIRFIGNNVNPEWNEVFPFS-TTYP---NVPIMLSVCD 80 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~-----~~~~t~~~~~~~~P~w~e~~~~~-~~~~---~~~l~~~v~d 80 (159)
..+.|.|+|++|++|+..+ .+.+||||++.+.. ..++|+++.++.||.|+|.|.|. +... ...|.|+|||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 5678999999999999999 88999999999863 68899999999999999999998 5432 3689999999
Q ss_pred ccCCCCCCccEEEEEeCccchhhc
Q 044346 81 HDSFTKDDRMKDAKIDIREYMKDV 104 (159)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~ 104 (159)
++.++++++||++.++|.++..+.
T Consensus 107 ~d~~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 107 EDKFGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp ECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred CCCCCCCcEEEEEEEEHHHcCCCC
Confidence 999999999999999999976543
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.82 E-value=9e-20 Score=122.72 Aligned_cols=104 Identities=24% Similarity=0.359 Sum_probs=89.5
Q ss_pred cceEEEEEEEEeeCCCCCC--CCCCCcEEEEEEC-----CeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHD--HSGSDPCVFVMMA-----KENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCD 80 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~--~~~~dpy~~v~~~-----~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d 80 (159)
..+.|.|+|++|++|+..+ .+.+||||++.+. ...++|+++.++.||.|||.|.|.+... ...|.|+|||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 4678999999999999877 6889999999986 3478999999999999999999998764 3469999999
Q ss_pred ccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC
Q 044346 81 HDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN 123 (159)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 123 (159)
++.++++++||++.++|.++...... +.|+.+..
T Consensus 101 ~d~~~~~~~iG~~~i~l~~l~~~~~~---------~~W~~L~~ 134 (148)
T 3fdw_A 101 HGRFGRNTFLGEAEIQMDSWKLDKKL---------DHCLPLHG 134 (148)
T ss_dssp ECGGGCEEEEEEEEEEHHHHHHHCCS---------EEEEECBC
T ss_pred CCCCcCCcEEEEEEEEcccccccCCc---------cceEECcC
Confidence 99999999999999999998765443 67887754
No 24
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=7.7e-20 Score=121.87 Aligned_cols=107 Identities=16% Similarity=0.286 Sum_probs=89.5
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEEeecccCCCCCccccEEEEEe-eCC---CCcEEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMM-----AKENIKIRFIGNNVNPEWNEVFPFST-TYP---NVPIMLSVCD 80 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~-----~~~~~~t~~~~~~~~P~w~e~~~~~~-~~~---~~~l~~~v~d 80 (159)
..+.|.|+|++|++|+.++ .+.+||||++.+ ....++|+++.++.||.|||.|.|.+ ... ...|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 3578999999999999999 889999999998 35678999999999999999999994 322 4689999999
Q ss_pred ccCCCC--CCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCccc
Q 044346 81 HDSFTK--DDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECG 127 (159)
Q Consensus 81 ~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G 127 (159)
++.+++ +++||++.++|.++..+. ...|+.+.....|
T Consensus 99 ~d~~~~~~~~~lG~~~i~l~~l~~~~----------~~~W~~L~~~~~g 137 (141)
T 1v27_A 99 QARVREEESEFLGEILIELETALLDD----------EPHWYKLQTHDSG 137 (141)
T ss_dssp BCSSSSCCBCCCEEEEEEGGGCCCSS----------EEEEEECBCCSSC
T ss_pred CCCCcCCCCceEEEEEEEccccCCCC----------CCceEECcccccC
Confidence 999987 899999999999975421 2678888654443
No 25
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=1.4e-19 Score=118.86 Aligned_cols=92 Identities=14% Similarity=0.295 Sum_probs=77.4
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEEeecccCCCCCccccEEEEEeeC----CCCcEEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMM-----AKENIKIRFIGNNVNPEWNEVFPFSTTY----PNVPIMLSVCD 80 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~-----~~~~~~t~~~~~~~~P~w~e~~~~~~~~----~~~~l~~~v~d 80 (159)
..+.|.|+|.+|++|+.++ .+.+||||++.+ ....++|+++.++.||.|||.|.|.+.. ....|.|+|||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 4578999999999999999 889999999998 3678899999999999999999999532 24689999999
Q ss_pred ccCCCC--CCccEEEEEeCccchh
Q 044346 81 HDSFTK--DDRMKDAKIDIREYMK 102 (159)
Q Consensus 81 ~~~~~~--d~~lG~~~i~l~~l~~ 102 (159)
++.+++ +++||++.++|.++..
T Consensus 96 ~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 96 QARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp C-------CEEEEEEEEEGGGCCC
T ss_pred CCcCcCcCCceeEEEEEEccccCC
Confidence 999987 8999999999999765
No 26
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.81 E-value=3.6e-20 Score=125.70 Aligned_cols=91 Identities=21% Similarity=0.233 Sum_probs=82.3
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC------eEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAK------ENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCD 80 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~------~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d 80 (159)
..+.|.|.|++|++|+.++ .+.+||||++++.. .+++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 4678999999999999999 89999999999863 278999999999999999999998753 4689999999
Q ss_pred ccCCCCCCccEEEEEeCccch
Q 044346 81 HDSFTKDDRMKDAKIDIREYM 101 (159)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~ 101 (159)
++.++++++||++.++|.++.
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSC
T ss_pred CCCCCCCcEEEEEEEEHHHcc
Confidence 999999999999999999974
No 27
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.81 E-value=9.7e-20 Score=125.47 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=89.5
Q ss_pred cceEEEEEEEEeeCCCCCC--CCCCCcEEEEEEC--C---eEEEeecccCCCCCccccEEEEEeeCCCCcEEEEEE-Ecc
Q 044346 11 SLLSLRLRIKQGVNLAIHD--HSGSDPCVFVMMA--K---ENIKIRFIGNNVNPEWNEVFPFSTTYPNVPIMLSVC-DHD 82 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~--~~~~dpy~~v~~~--~---~~~~t~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~-d~~ 82 (159)
..+.|.|+|++|++|+.++ .+.+||||++.+. . ..++|+++.++.||.|||+|.|.+......|.|+|| |++
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 4678999999999999988 4899999999986 2 377999999999999999999998766789999999 999
Q ss_pred CCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC
Q 044346 83 SFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN 123 (159)
Q Consensus 83 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 123 (159)
.+++|++||++.++|.++...... +.|+.+..
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~~~~~---------~~W~~L~~ 139 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDLSSMV---------IGWYKLFP 139 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCTTSCE---------EEEEECBC
T ss_pred CCCCCCEEEEEEEEHHHcccCCCc---------ceeEECCC
Confidence 999999999999999997653322 67888754
No 28
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=2.8e-20 Score=124.26 Aligned_cols=103 Identities=24% Similarity=0.355 Sum_probs=87.9
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCe--------------EEEeecccCCCCCccccEEEEE-eeC---CCC
Q 044346 12 LLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKE--------------NIKIRFIGNNVNPEWNEVFPFS-TTY---PNV 72 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~--------------~~~t~~~~~~~~P~w~e~~~~~-~~~---~~~ 72 (159)
.+.|.|+|++|++|+.++ .+.+||||++.+... .++|+++.++.||.|||.|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 578999999999999999 899999999999842 4688899999999999999997 543 356
Q ss_pred cEEEEEEEccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC
Q 044346 73 PIMLSVCDHDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN 123 (159)
Q Consensus 73 ~l~~~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 123 (159)
.|.|+|||++.++++++||++.++|.++...... +.|+.+.+
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~---------~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNT---------PRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTC---------CEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCC---------CeEEECCc
Confidence 8999999999999999999999999998653322 66887754
No 29
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=3.7e-19 Score=118.43 Aligned_cols=102 Identities=12% Similarity=0.137 Sum_probs=84.6
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC----CeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEcc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA----KENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDHD 82 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~----~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~~ 82 (159)
..+.|.|+|++|+ .++ .+.+||||++.+. ...++|+++.+++||.|||.|.|.+... ...|.|+|||++
T Consensus 24 ~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 4678999999999 356 7899999999983 2367999999999999999999998754 458999999999
Q ss_pred CCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCC
Q 044346 83 SFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNI 124 (159)
Q Consensus 83 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~ 124 (159)
.+++|++||++.++|.++...... +.|+.+.+.
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~~~~~---------~~W~~L~~~ 133 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSVPLGA---------AQWGELKTS 133 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSSCTTC---------CEEEECCCC
T ss_pred CCCCCcEEEEEEEEcccccCcccc---------cceeeCcCC
Confidence 999999999999999997532222 668877653
No 30
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.81 E-value=5.5e-19 Score=116.42 Aligned_cols=120 Identities=14% Similarity=0.228 Sum_probs=100.6
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEEeeccc-CCCCCccccEEEEEeeCC---CCcEEEEEEEccCCCC
Q 044346 11 SLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAKENIKIRFIG-NNVNPEWNEVFPFSTTYP---NVPIMLSVCDHDSFTK 86 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~~~~~t~~~~-~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~~~~~~ 86 (159)
....|+|.+.+|.+|+. .+|||+++.+.+.+++|+++. ++.||+|||.|.|.+..+ ++.|.++|+|++.+++
T Consensus 19 ~~msL~V~l~~a~~Lpg----~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~ 94 (144)
T 3l9b_A 19 SHMALIVHLKTVSELRG----RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFS 94 (144)
T ss_dssp CCEEEEEEEEEEESCCS----CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSC
T ss_pred CcEEEEEEEEEecCCCC----CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccC
Confidence 34578999999999974 899999999999999999998 699999999999998764 5799999999999999
Q ss_pred CCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC-CcccEEEEEEEEEeCCC
Q 044346 87 DDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN-IECGKLQVQLRYCNLPG 140 (159)
Q Consensus 87 d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~G~l~l~l~~~~~~~ 140 (159)
+++||++.++|.++..++.+.+. +--.+..+ ...+.|.++++|.++++
T Consensus 95 nrlIG~~~i~Lq~lv~~~~l~l~------~~LvD~n~~~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 95 NKLIGTFRMVLQKVVEENRVEVS------DTLIDDNNAIIKTSLSMEVRYQAADG 143 (144)
T ss_dssp CEEEEEEEEESHHHHHHSEEEEE------EEEECTTSCEEEEEEEEEEEEEETTC
T ss_pred CCEEEEEEEEhHHhccCCeEEEe------ecccCCCCCccccEEEEEEEecCCCC
Confidence 99999999999999998776432 21222222 34589999999998664
No 31
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=7e-19 Score=116.98 Aligned_cols=92 Identities=22% Similarity=0.444 Sum_probs=82.1
Q ss_pred cceEEEEEEEEeeCCCCCC-C-CCCCcEEEEEEC---CeEEEeecccCCCCCccccEEEEE-eeCC---CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-H-SGSDPCVFVMMA---KENIKIRFIGNNVNPEWNEVFPFS-TTYP---NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~-~~~dpy~~v~~~---~~~~~t~~~~~~~~P~w~e~~~~~-~~~~---~~~l~~~v~d~ 81 (159)
..+.|.|+|++|++|+.++ . +.+||||++.+. ...++|+++.++.||.|||.|.|. +... ...|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 5678999999999999998 5 889999999985 478899999999999999999996 6543 35899999999
Q ss_pred cCCCCCCccEEEEEeCccchh
Q 044346 82 DSFTKDDRMKDAKIDIREYMK 102 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~ 102 (159)
+.+++|++||++.++|.++..
T Consensus 100 d~~~~~~~lG~~~i~l~~l~~ 120 (138)
T 1ugk_A 100 DRFSRDDIIGEVLIPLSGIEL 120 (138)
T ss_dssp CSSCCCCCCEEEEEECTTCCC
T ss_pred CCCCCCcEEEEEEEehhHccC
Confidence 999999999999999999765
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=3e-19 Score=119.96 Aligned_cols=93 Identities=17% Similarity=0.276 Sum_probs=80.7
Q ss_pred cceEEEEEEEEeeCCCCC-C-------CCCCCcEEEEEEC---CeEEEeecccCCCCCccccEEEEEeeCC---CCcEEE
Q 044346 11 SLLSLRLRIKQGVNLAIH-D-------HSGSDPCVFVMMA---KENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIML 76 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~-~-------~~~~dpy~~v~~~---~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~ 76 (159)
..+.|.|+|++|++|+.. + .+.+||||++.+. ...++|+++.++.||.|||.|.|.+... ...|.|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 467899999999999984 3 3579999999986 4578999999999999999999997653 358999
Q ss_pred EEEEccCCCCCCccEEEEEeCccchhh
Q 044346 77 SVCDHDSFTKDDRMKDAKIDIREYMKD 103 (159)
Q Consensus 77 ~v~d~~~~~~d~~lG~~~i~l~~l~~~ 103 (159)
+|||++.++++++||++.++|.++...
T Consensus 104 ~V~d~d~~~~~~~iG~~~i~l~~l~~~ 130 (147)
T 2enp_A 104 TVVDFDKFSRHCVIGKVSVPLCEVDLV 130 (147)
T ss_dssp EEECCSTTCCSCCCEEEEEETTTSCTT
T ss_pred EEEECCCCcCCcEEEEEEEechhcCCC
Confidence 999999999999999999999997653
No 33
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=4.6e-19 Score=118.39 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=85.3
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC-----CeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA-----KENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~-----~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~ 81 (159)
..+.|.|+|++|++|+.++ .+ +||||++.+. ...++|+++.++.||.|||.|.|.+... ...|.|+|||+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNS 100 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEEC
Confidence 3678999999999999999 78 9999999984 2678999999999999999999997642 35899999999
Q ss_pred cCCCC--CCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC
Q 044346 82 DSFTK--DDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN 123 (159)
Q Consensus 82 ~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 123 (159)
+.+++ +++||++.++|.++...... +.|+.+.+
T Consensus 101 d~~~~~~~~~iG~~~i~l~~~~~~~~~---------~~W~~L~~ 135 (142)
T 2dmg_A 101 GGFLSKDKGLLGKVLVALASEELAKGW---------TQWYDLTE 135 (142)
T ss_dssp CCSSCCSCCCCEEEEEECCCSTTTTCB---------CCBCCCBC
T ss_pred CCccccCCcEEEEEEEecccccccccc---------cceeeccC
Confidence 98763 57999999999997653322 55776643
No 34
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.79 E-value=1.4e-18 Score=114.69 Aligned_cols=87 Identities=16% Similarity=0.245 Sum_probs=73.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEEeeccc-CCCCCccccEEEEEeeCCCCcEEEEEEEccCCCCCCcc
Q 044346 12 LLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAKENIKIRFIG-NNVNPEWNEVFPFSTTYPNVPIMLSVCDHDSFTKDDRM 90 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~~~~~t~~~~-~~~~P~w~e~~~~~~~~~~~~l~~~v~d~~~~~~d~~l 90 (159)
.+.|.|+|.+|++++. .+.+||||++. . +..+|+++. ++.||.|||.|.|.+......|.|+|||++ +++|++|
T Consensus 4 ~~~L~V~V~~A~~l~~--~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~i 78 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA--QEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMV 78 (131)
T ss_dssp CEEEEEEEEEEECSSC--GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEE
T ss_pred ceEEEEEEEEeECCCC--CCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeE
Confidence 4789999999998853 57899999998 3 334555554 699999999999999877778999999999 8899999
Q ss_pred EEEEEeCccchhh
Q 044346 91 KDAKIDIREYMKD 103 (159)
Q Consensus 91 G~~~i~l~~l~~~ 103 (159)
|++.++|.++...
T Consensus 79 G~~~i~l~~l~~~ 91 (131)
T 2cjt_A 79 GTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEGGGSCBC
T ss_pred EEEEEEHHHhhhc
Confidence 9999999998653
No 35
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.79 E-value=6.5e-19 Score=119.83 Aligned_cols=91 Identities=25% Similarity=0.345 Sum_probs=81.1
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--C---eEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA--K---ENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~--~---~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~ 81 (159)
..+.|.|+|++|++|+..+ .+.+||||++.+. . ..++|+++.++.||.|||.|.|.+... ...|.|+|||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 4678999999999999999 8899999999986 1 467999999999999999999998754 35799999999
Q ss_pred cCCCCCCccEEEEEeCccch
Q 044346 82 DSFTKDDRMKDAKIDIREYM 101 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~ 101 (159)
+.+++|++||.+.+++..+.
T Consensus 103 d~~~~~~~iG~~~i~l~~~~ 122 (159)
T 1tjx_A 103 DKIGKNDAIGKVFVGYNSTG 122 (159)
T ss_dssp CSSSCCEEEEEEEEETTCCH
T ss_pred CCCCCCceEEEEEECCCCCC
Confidence 99999999999999999753
No 36
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.78 E-value=1.2e-18 Score=115.54 Aligned_cols=93 Identities=27% Similarity=0.340 Sum_probs=82.7
Q ss_pred ccceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEEeecccCCCCCccccEEEEEeeCCC---CcEEEEEEE
Q 044346 10 TSLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAK-----ENIKIRFIGNNVNPEWNEVFPFSTTYPN---VPIMLSVCD 80 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~-----~~~~t~~~~~~~~P~w~e~~~~~~~~~~---~~l~~~v~d 80 (159)
...+.|.|+|++|++|+..+ .+.+||||++.+.. ..++|+++.++.||.|||.|.|.+.... ..|.|+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 35688999999999999999 88999999999862 4779999999999999999999987643 589999999
Q ss_pred ccCCCCCCccEEEEEeCccchh
Q 044346 81 HDSFTKDDRMKDAKIDIREYMK 102 (159)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~ 102 (159)
++.+++|++||++.+++.++..
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~~~ 114 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSGPG 114 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSCHH
T ss_pred CCCCCCCcEEEEEEEccccCCh
Confidence 9999999999999999998654
No 37
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.78 E-value=1.9e-18 Score=118.35 Aligned_cols=92 Identities=25% Similarity=0.285 Sum_probs=82.9
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECC-----eEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAK-----ENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~-----~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~ 81 (159)
..+.|.|+|++|++|+.++ .+.+||||++.+.. ..++|+++.+++||.|||.|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 4678999999999999999 88999999999873 688999999999999999999998753 45899999999
Q ss_pred cCCCCCCccEEEEEeCccchh
Q 044346 82 DSFTKDDRMKDAKIDIREYMK 102 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~ 102 (159)
+.++++++||++.+++.++..
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~ 135 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGE 135 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHH
T ss_pred CCCCCCcEEEeEEEecccCCc
Confidence 999999999999999998644
No 38
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.77 E-value=3.7e-18 Score=115.32 Aligned_cols=89 Identities=19% Similarity=0.247 Sum_probs=75.4
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--Ce---EEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA--KE---NIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~--~~---~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~ 81 (159)
..+.|.|+|++|++|+.++ .+.+||||++.+. .. .++|+++.++.||.|||+|.|.+... ...|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 4578999999999999999 8899999999984 32 67999999999999999999998764 25899999999
Q ss_pred cCCCCCCccEEEEEeCcc
Q 044346 82 DSFTKDDRMKDAKIDIRE 99 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~ 99 (159)
+.++++++||++.+++..
T Consensus 108 d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 108 ERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CTTSCCEEEEEEEESTTC
T ss_pred CCCCCCcEEEEEEECCCC
Confidence 999999999999999988
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.76 E-value=1.7e-17 Score=113.73 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=75.8
Q ss_pred ccceEEEEEEEEeeCCCCCCCCCCCcEEEEEECCeEEEeeccc-CCCCCccccEEEEEeeCCCCcEEEEEEEccCCCCCC
Q 044346 10 TSLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAKENIKIRFIG-NNVNPEWNEVFPFSTTYPNVPIMLSVCDHDSFTKDD 88 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~~~~~t~~~~-~~~~P~w~e~~~~~~~~~~~~l~~~v~d~~~~~~d~ 88 (159)
.+.+.|.|+|++|++++. .+.+||||++. . +..+|+++. ++.||.|||.|.|.+......|.|+|||++ +++|+
T Consensus 11 g~~~~L~V~V~~A~~l~~--~g~~DPYV~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDGA--QEKFNTYVTLK-V-QNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp SCCCEEEEEEEEEECSSC--GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCE
T ss_pred CceEEEEEEEEEEECCCC--CCCCCeEEEEE-e-cceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCc
Confidence 357899999999998843 67899999998 3 345666665 699999999999999877788999999999 88999
Q ss_pred ccEEEEEeCccchhh
Q 044346 89 RMKDAKIDIREYMKD 103 (159)
Q Consensus 89 ~lG~~~i~l~~l~~~ 103 (159)
+||++.++|.++...
T Consensus 86 ~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQS 100 (167)
T ss_dssp EEEEEEEEGGGSCBC
T ss_pred eEEEEEEEHHHhccc
Confidence 999999999998653
No 40
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.75 E-value=2.1e-17 Score=131.28 Aligned_cols=111 Identities=20% Similarity=0.295 Sum_probs=94.5
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeEEEeecccCCCCCccccEEEEEeeC--CCCcEEEEEEEccCCCCCC
Q 044346 12 LLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKENIKIRFIGNNVNPEWNEVFPFSTTY--PNVPIMLSVCDHDSFTKDD 88 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~~~~t~~~~~~~~P~w~e~~~~~~~~--~~~~l~~~v~d~~~~~~d~ 88 (159)
.+.|.|+|++|++|+. + .+.+||||++.++...++|+++.+++||.|||.|.|.+.. ....|.|+|||+|.+++||
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD 471 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 471 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCE
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCC
Confidence 6789999999999998 8 8999999999999888999999999999999999998542 5789999999999999999
Q ss_pred ccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEEEEEEEEEeCC
Q 044346 89 RMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKLQVQLRYCNLP 139 (159)
Q Consensus 89 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l~l~l~~~~~~ 139 (159)
+||.+.++|.. |. .+.|+.+ ..|.|+++++..=.|
T Consensus 472 ~LG~~~~~L~~-----------g~--~~~~~~l---~~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 472 LLGSCDRSPHS-----------GF--HEVTCEL---NHGRVKFSYHAKCLP 506 (540)
T ss_dssp EEEEEEECCCS-----------EE--EEEEEEC---SSSEEEEEEEEEECT
T ss_pred EEEEEEEEeeC-----------Cc--EEEEEEc---CCeEEEEEEEEEECC
Confidence 99999999884 11 1456654 369999988765433
No 41
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.67 E-value=2.8e-16 Score=128.63 Aligned_cols=104 Identities=16% Similarity=0.316 Sum_probs=90.4
Q ss_pred ccceEEEEEEEEeeCCCC---CC-CCCCCcEEEEEEC---CeEEEeecccCCCCCccccEEEEEeeCC-CCcEEEEEEEc
Q 044346 10 TSLLSLRLRIKQGVNLAI---HD-HSGSDPCVFVMMA---KENIKIRFIGNNVNPEWNEVFPFSTTYP-NVPIMLSVCDH 81 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~---~~-~~~~dpy~~v~~~---~~~~~t~~~~~~~~P~w~e~~~~~~~~~-~~~l~~~v~d~ 81 (159)
.+.+.|.|+|++|++|+. ++ .+.+||||++.+. ..+++|+++.+++||+|||.|.|.+..+ ...|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 457899999999999999 78 8899999999998 4688999999999999999999999874 67999999999
Q ss_pred cCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC
Q 044346 82 DSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN 123 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 123 (159)
+.++ |++||++.++|.++..+... +.|+.+..
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~---------~~w~~L~~ 126 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKK---------EVPFIFNQ 126 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCC---------CEEEEETT
T ss_pred CCCC-CceeEEEEEEHHHcCCCCce---------EEEEecCC
Confidence 9998 99999999999997653322 56777754
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.66 E-value=1.8e-15 Score=122.41 Aligned_cols=114 Identities=27% Similarity=0.345 Sum_probs=94.0
Q ss_pred cceEEEEEEEEeeCCCCCC---CCCCCcEEEEEEC-----CeEEEeecccCC-CCCccccEEEEEeeCCC-CcEEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHD---HSGSDPCVFVMMA-----KENIKIRFIGNN-VNPEWNEVFPFSTTYPN-VPIMLSVCD 80 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~---~~~~dpy~~v~~~-----~~~~~t~~~~~~-~~P~w~e~~~~~~~~~~-~~l~~~v~d 80 (159)
..+.|.|+|++|++|+..+ .+.+||||++.+. ..+++|+++.++ .||.|||+|.|.+..++ ..|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 5678999999999999887 4789999999984 368899999986 99999999999988764 689999999
Q ss_pred ccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC---C--cccEEEEEEEEE
Q 044346 81 HDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN---I--ECGKLQVQLRYC 136 (159)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~---~--~~G~l~l~l~~~ 136 (159)
++.++++++||++.++|..+..+ ..|+++.+ . ..|.|.|++++.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G------------~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG------------YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE------------EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC------------cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 99999999999999999997652 22333322 2 357888888875
No 43
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=1.1e-15 Score=112.61 Aligned_cols=92 Identities=25% Similarity=0.340 Sum_probs=80.7
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC--C---eEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA--K---ENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~--~---~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~ 81 (159)
..+.|.|.|++|++|+.++ .+.+||||++.+. . ..++|+++.++.||.|||.|.|.+... ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 3568999999999999999 8899999999984 2 467899999999999999999998765 34799999999
Q ss_pred cCCCCCCccEEEEEeCccchh
Q 044346 82 DSFTKDDRMKDAKIDIREYMK 102 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~ 102 (159)
+.++++++||++.+++..+..
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~ 248 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGA 248 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHH
T ss_pred CCCCCCcEEEEEEECCCCCCc
Confidence 999999999999999987543
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.59 E-value=1.3e-16 Score=125.82 Aligned_cols=90 Identities=12% Similarity=0.067 Sum_probs=9.8
Q ss_pred ccceEEEEEEEEeeCCCCCCCCCCCcEEEEEECCe-EEEeecccCC---CCCccccEEEEEeeCCCCcEEEEEEEc-c--
Q 044346 10 TSLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAKE-NIKIRFIGNN---VNPEWNEVFPFSTTYPNVPIMLSVCDH-D-- 82 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~~-~~~t~~~~~~---~~P~w~e~~~~~~~~~~~~l~~~v~d~-~-- 82 (159)
...+.|+|+|++|++|+.++ ||||.+.++.. ..+|+++.++ .||.|||+|.|.+......|.++|||+ +
T Consensus 8 r~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EEEECC-------------------------------------------------CCEECC-------------------
T ss_pred eeccEEEEEEEEcCCcCCCC----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc
Confidence 34678999999999998865 89999998854 5689999998 999999999999655568899999994 4
Q ss_pred -CCCCCCccEEEEEeCccchhh
Q 044346 83 -SFTKDDRMKDAKIDIREYMKD 103 (159)
Q Consensus 83 -~~~~d~~lG~~~i~l~~l~~~ 103 (159)
..++|++||.+.++++++..+
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~ 105 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGR 105 (483)
T ss_dssp ----------------------
T ss_pred ccCCCCceEEEEEEEHHHhcCC
Confidence 367899999999999998764
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.58 E-value=7.3e-16 Score=114.50 Aligned_cols=92 Identities=23% Similarity=0.274 Sum_probs=81.5
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEEC-----CeEEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMA-----KENIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~-----~~~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~ 81 (159)
..+.|.|.|++|++|+.++ .+.+||||++++. ..+++|+++.++.||.|||.|.|.+... ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 3578999999999999999 8889999999985 2577999999999999999999998754 34799999999
Q ss_pred cCCCCCCccEEEEEeCccchh
Q 044346 82 DSFTKDDRMKDAKIDIREYMK 102 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~ 102 (159)
+.++++++||.+.+++..+..
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCH
T ss_pred CCCCCCceEEEEEECCccCCc
Confidence 999999999999999998643
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.49 E-value=1e-13 Score=113.37 Aligned_cols=92 Identities=27% Similarity=0.405 Sum_probs=82.5
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCCCcEEEEEE-----CCeEEEeecccCCCCCccccEEEEEeeCC--CCcEEEEEEEccC
Q 044346 12 LLSLRLRIKQGVNLAIHD-HSGSDPCVFVMM-----AKENIKIRFIGNNVNPEWNEVFPFSTTYP--NVPIMLSVCDHDS 83 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~-----~~~~~~t~~~~~~~~P~w~e~~~~~~~~~--~~~l~~~v~d~~~ 83 (159)
.+.|.|.+.+|++|+.++ .+.+|||+++.+ ...+++|+++.+++||.|||.|.|.+... ...|.++|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 467999999999999999 999999999998 35678999999999999999999998754 4579999999999
Q ss_pred CCCCCccEEEEEeCccchhh
Q 044346 84 FTKDDRMKDAKIDIREYMKD 103 (159)
Q Consensus 84 ~~~d~~lG~~~i~l~~l~~~ 103 (159)
+++|++||.+.+++.++...
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~ 270 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKA 270 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHC
T ss_pred ccccccccccccchhhhccC
Confidence 99999999999999988753
No 47
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.48 E-value=1.2e-12 Score=84.99 Aligned_cols=120 Identities=14% Similarity=0.216 Sum_probs=91.4
Q ss_pred ccCcccceEEEEEEEEeeCCCCCC--CCCCCcEEEEEECCe----EEEe-ecccCCCCCccccEEEEEeeCCCCcEEEEE
Q 044346 6 KGRRTSLLSLRLRIKQGVNLAIHD--HSGSDPCVFVMMAKE----NIKI-RFIGNNVNPEWNEVFPFSTTYPNVPIMLSV 78 (159)
Q Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~~--~~~~dpy~~v~~~~~----~~~t-~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v 78 (159)
.|.....+.|+|.+.+..--+.+. ....||||.+.+... ..+| ....+|..|.|+++|...+. ..+.|.+.|
T Consensus 3 ~~~~~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~V 81 (138)
T 2enj_A 3 SGSSGMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIV 81 (138)
T ss_dssp CCCSSCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEE
T ss_pred CcccccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEE
Confidence 567777888999988776544332 456899999988722 2455 55567999999999999888 689999999
Q ss_pred EEccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEEEEEEEEE
Q 044346 79 CDHDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKLQVQLRYC 136 (159)
Q Consensus 79 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l~l~l~~~ 136 (159)
|+... +|++.+++++++|.....-. .+ ..++|++| ++.|+|++.++|.
T Consensus 82 fh~a~----~fVAn~tV~~edL~~~ck~~--~g--~~e~WvdL--eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 82 KGKNV----DLISETTVELYSLAERCRKN--NG--KTEIWLEL--KPQGRMLMNARYF 129 (138)
T ss_dssp ECSSC----SCCEEEEEESHHHHHHHHHT--TT--CEEEEEEC--BSSCEEEEEEEEC
T ss_pred EcCCC----CeeeEEEEEHHHHHhhhccC--CC--ceEEEEec--ccCcEEEEEEEEE
Confidence 95543 89999999999998652110 11 12889988 6799999999986
No 48
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.47 E-value=4.4e-12 Score=81.31 Aligned_cols=115 Identities=15% Similarity=0.169 Sum_probs=85.9
Q ss_pred cceEEEEEEEEeeCCCCCC-CCCCCcEEEEEECCeE----EEe-ecccCCCCCccccEEEEEeeCCCCcEEEEEEEccCC
Q 044346 11 SLLSLRLRIKQGVNLAIHD-HSGSDPCVFVMMAKEN----IKI-RFIGNNVNPEWNEVFPFSTTYPNVPIMLSVCDHDSF 84 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~-~~~~dpy~~v~~~~~~----~~t-~~~~~~~~P~w~e~~~~~~~~~~~~l~~~v~d~~~~ 84 (159)
....|+|.+.+..--+.+. ....||||.+.+.... .+| ....+|..|.|+++|...+. ..+.|.+.||+...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE- 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT-
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC-
Confidence 3456888887665433333 4568999999887222 244 56667999999999999988 68999999996554
Q ss_pred CCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCCCcccEEEEEEEEE
Q 044346 85 TKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTNIECGKLQVQLRYC 136 (159)
Q Consensus 85 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~~G~l~l~l~~~ 136 (159)
+|++.+++++++|.....-. ++ ..++|++| .+.|+|++.++|.
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~--~g--~~e~WvdL--eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKN--NG--KAEFWLDL--QPQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTT--TT--EEEEEEEC--BSSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccC--CC--ceEEEEec--ccCcEEEEEEEEe
Confidence 89999999999998652110 11 22889988 6799999999986
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.34 E-value=1.8e-11 Score=101.22 Aligned_cols=109 Identities=15% Similarity=0.213 Sum_probs=85.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCcEEEEEECC-------eEEEeecccC-CCCCccccE-EEEE-eeCCC-CcEEEEEEE
Q 044346 12 LLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAK-------ENIKIRFIGN-NVNPEWNEV-FPFS-TTYPN-VPIMLSVCD 80 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~-------~~~~t~~~~~-~~~P~w~e~-~~~~-~~~~~-~~l~~~v~d 80 (159)
.+.|.|+|++|++|+.. .+||||.+.+.+ .+++|+++.+ +.||+|||+ |.|. +..++ ..|.|.|||
T Consensus 649 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK---QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSS---CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC---CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 47899999999999863 589999999863 5779999885 799999998 9998 76554 589999999
Q ss_pred ccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecCC-----CcccEEEEEEEEEeCC
Q 044346 81 HDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLTN-----IECGKLQVQLRYCNLP 139 (159)
Q Consensus 81 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~~-----~~~G~l~l~l~~~~~~ 139 (159)
++ ++++|++.++|..|..+ ..+++|.+ -..+.|.+++.+.++.
T Consensus 726 ~d----ddfiG~~~ipL~~L~~G------------yR~vpL~~~~g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPG------------YRHVPLRNESNRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCE------------EEEEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred cC----CCeeeEEEEEHHHcCCc------------ceEEEEeCCCCCCCCceEEEEEEEEEecC
Confidence 85 68999999999997652 12222221 2347899999887654
No 50
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.33 E-value=1.5e-11 Score=102.41 Aligned_cols=111 Identities=16% Similarity=0.212 Sum_probs=84.7
Q ss_pred ceEEEEEEEEeeCCCCCCCCCCCcEEEEEECC------eEEEeecccC-CCCCcccc-EEEEE-eeCCC-CcEEEEEEEc
Q 044346 12 LLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAK------ENIKIRFIGN-NVNPEWNE-VFPFS-TTYPN-VPIMLSVCDH 81 (159)
Q Consensus 12 ~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~------~~~~t~~~~~-~~~P~w~e-~~~~~-~~~~~-~~l~~~v~d~ 81 (159)
...|.|+|++|++|+.. .+||||++.+.+ .+++|+++.+ +.||+||| .|.|. +..++ ..|.|+|||+
T Consensus 724 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp CEEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred ceEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 34799999999999863 589999999852 3578998875 69999999 69998 65553 5799999998
Q ss_pred cCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEeecC-C--CcccEEEEEEEEEeCC
Q 044346 82 DSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLKLT-N--IECGKLQVQLRYCNLP 139 (159)
Q Consensus 82 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~l~-~--~~~G~l~l~l~~~~~~ 139 (159)
+ +++||++.++|..|..+-. .+.|... + -..|.|.|.+.+.++.
T Consensus 801 d----ddfiG~~~lpL~~L~~GyR----------~vpL~~~~g~~l~~atLfv~i~~~~~~ 847 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRSGYH----------YVCLRNEANQPLCLPALLIYTEASDYI 847 (885)
T ss_dssp T----TEEEEEEEEETTTCCCEEE----------EEEEECTTSCEEEEEEEEEEEEEEECC
T ss_pred C----ccEEeeEEEEHHHcCCCce----------EEEecCCCCCccCceEEEEEEEEEecC
Confidence 7 6899999999999765211 1222222 1 2468999999998754
No 51
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.29 E-value=4.2e-11 Score=99.24 Aligned_cols=85 Identities=19% Similarity=0.300 Sum_probs=70.8
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCcEEEEEECC------eEEEee-ccc-CCCCCcccc-EEEE-EeeCCC-CcEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMAK------ENIKIR-FIG-NNVNPEWNE-VFPF-STTYPN-VPIMLSVC 79 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~~------~~~~t~-~~~-~~~~P~w~e-~~~~-~~~~~~-~~l~~~v~ 79 (159)
..+.|.|+|++|++|+. +.+||||++.+.+ .+++|+ ++. ++.||+||| .|.| .+..++ ..|.|.||
T Consensus 676 ~~~~L~V~Visa~~L~~---~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE---RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCS---SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCc---cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 35789999999999986 4689999999841 367898 776 479999999 6999 776554 48999999
Q ss_pred EccCCCCCCccEEEEEeCccchh
Q 044346 80 DHDSFTKDDRMKDAKIDIREYMK 102 (159)
Q Consensus 80 d~~~~~~d~~lG~~~i~l~~l~~ 102 (159)
|++ ++++|++.++|..|..
T Consensus 753 D~d----~d~iG~~~ipl~~L~~ 771 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNS 771 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCC
T ss_pred EeC----CCccceEeeehhhcCC
Confidence 987 6899999999999764
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=95.70 E-value=0.22 Score=33.06 Aligned_cols=123 Identities=13% Similarity=0.113 Sum_probs=79.3
Q ss_pred cccceEEEEEEEEeeCCCCCC--CCCCCcEEEEEEC---CeEEEeecccCCCCCccccEEEEEeeCC--------CCcEE
Q 044346 9 RTSLLSLRLRIKQGVNLAIHD--HSGSDPCVFVMMA---KENIKIRFIGNNVNPEWNEVFPFSTTYP--------NVPIM 75 (159)
Q Consensus 9 ~~~~~~L~v~v~~a~~L~~~~--~~~~dpy~~v~~~---~~~~~t~~~~~~~~P~w~e~~~~~~~~~--------~~~l~ 75 (159)
....+.+.|+|.++.--+..- .+..+|.....+. -+.+.|.+.. +.+|.+|.+-.+.+... ...+.
T Consensus 14 ~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 14 ERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp CSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred cCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 445778999998876322111 2345675555554 4566666666 77999999888887643 23788
Q ss_pred EEEEEccCCCCCCccEEEEEeCccchhhcccCCCCCceeeeEEee-cCC--CcccEEEEEEEEEeCC
Q 044346 76 LSVCDHDSFTKDDRMKDAKIDIREYMKDVKINLEPRNAVKDLDLK-LTN--IECGKLQVQLRYCNLP 139 (159)
Q Consensus 76 ~~v~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~-l~~--~~~G~l~l~l~~~~~~ 139 (159)
+++...... .-+.+|.++++|.++...++ .+.....+. ..+ ..-|.|.+.+++..|-
T Consensus 93 lELhqa~g~-~~~tla~~~I~l~~lLe~~~------~i~g~~~L~g~~g~~~~~G~LeywiRL~~Pi 152 (156)
T 2yrb_A 93 LEVHQAYST-EYETIAACQLKFHEILEKSG------RIFCTASLIGTKGDIPNFGTVEYWFRLRVSG 152 (156)
T ss_dssp EEEEEECSS-CEEEEEEEEECCSHHHHCCS------CEEEEEEECBSSSCCTTSEEEEEEEEEEECC
T ss_pred EEEEEeeCC-CceEEEEEEEEhHHhhCcCC------ceEEEEEEEcCCCCcceEEEEEEEEEEeccc
Confidence 888876533 44699999999999986432 111112221 233 3579999999886543
No 53
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=93.85 E-value=0.1 Score=33.62 Aligned_cols=29 Identities=24% Similarity=0.267 Sum_probs=26.1
Q ss_pred CcccEEEEEEEEEeCCCCCce-EEEEEecccc
Q 044346 124 IECGKLQVQLRYCNLPGSKGF-IMFYECSSLC 154 (159)
Q Consensus 124 ~~~G~l~l~l~~~~~~~~~~l-~~~~~~~~l~ 154 (159)
...|+|+++++|. +..+.| +.|++|+||.
T Consensus 18 ~~~G~l~~~l~y~--~~~~~L~v~v~~a~~L~ 47 (143)
T 3f04_A 18 EKLGKLQYSLDYD--FQNNQLLVGIIQAAELP 47 (143)
T ss_dssp CCCCEEEEEEEEE--TTTTEEEEEEEEEECCC
T ss_pred cCeEEEEEEEEEe--CCCCEEEEEEEEecCCC
Confidence 5689999999998 778889 9999999994
No 54
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=93.69 E-value=0.098 Score=34.56 Aligned_cols=29 Identities=28% Similarity=0.542 Sum_probs=25.3
Q ss_pred CcccEEEEEEEEEeCCCCCce-EEEEEecccc
Q 044346 124 IECGKLQVQLRYCNLPGSKGF-IMFYECSSLC 154 (159)
Q Consensus 124 ~~~G~l~l~l~~~~~~~~~~l-~~~~~~~~l~ 154 (159)
...|+|++++.|. +..+.| +.|++|+||.
T Consensus 27 ~~~G~l~~sl~y~--~~~~~L~V~Vi~a~~L~ 56 (155)
T 2z0u_A 27 VGATRIQIALKYD--EKNKQFAILIIQLSNLS 56 (155)
T ss_dssp -CCEEEEEEEEEE--TTTTEEEEEEEEEECGG
T ss_pred CCcEEEEEEEEEc--CCCCEEEEEEEEccCcC
Confidence 5689999999998 667889 9999999995
No 55
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=93.63 E-value=0.11 Score=34.42 Aligned_cols=29 Identities=31% Similarity=0.522 Sum_probs=26.0
Q ss_pred CcccEEEEEEEEEeCCCCCce-EEEEEecccc
Q 044346 124 IECGKLQVQLRYCNLPGSKGF-IMFYECSSLC 154 (159)
Q Consensus 124 ~~~G~l~l~l~~~~~~~~~~l-~~~~~~~~l~ 154 (159)
...|+|.++++|. +..+.| +.|++|+||.
T Consensus 21 ~~~G~l~~~l~y~--~~~~~L~V~v~~a~~L~ 50 (166)
T 2cm5_A 21 EERGKILVSLMYS--TQQGGLIVGIIRCVHLA 50 (166)
T ss_dssp CCCCEEEEEEEEE--TTTTEEEEEEEEEESCC
T ss_pred CccceEEEEEEEE--CCCCEEEEEEEEeECCC
Confidence 5689999999998 667889 9999999995
No 56
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=93.38 E-value=0.13 Score=33.50 Aligned_cols=29 Identities=24% Similarity=0.267 Sum_probs=25.8
Q ss_pred CcccEEEEEEEEEeCCCCCce-EEEEEecccc
Q 044346 124 IECGKLQVQLRYCNLPGSKGF-IMFYECSSLC 154 (159)
Q Consensus 124 ~~~G~l~l~l~~~~~~~~~~l-~~~~~~~~l~ 154 (159)
...|+|+++++|. +....| |.|++|+||.
T Consensus 26 ~~~G~l~~~l~y~--~~~~~L~V~v~~a~~L~ 55 (152)
T 1rsy_A 26 EKLGKLQYSLDYD--FQNNQLLVGIIQAAELP 55 (152)
T ss_dssp CCCCEEEEEEEEE--TTTTEEEEEEEEEESCC
T ss_pred CCceEEEEEEEEe--CCCCEEEEEEEEeECCC
Confidence 5689999999998 667889 9999999995
No 57
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=93.26 E-value=1.5 Score=30.79 Aligned_cols=55 Identities=11% Similarity=0.119 Sum_probs=41.1
Q ss_pred EEEeecccCCCCCccccEEEEEeeCC---CCcEEEEEEEccCC----CCCCccEEEEEeCcc
Q 044346 45 NIKIRFIGNNVNPEWNEVFPFSTTYP---NVPIMLSVCDHDSF----TKDDRMKDAKIDIRE 99 (159)
Q Consensus 45 ~~~t~~~~~~~~P~w~e~~~~~~~~~---~~~l~~~v~d~~~~----~~d~~lG~~~i~l~~ 99 (159)
.++|.+...+.+|.|+|++.+.+... ...|.|++++-... ..+..+|.+-++|-+
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 55777777889999999999998864 45888998764422 123478999998764
No 58
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=92.98 E-value=0.77 Score=39.10 Aligned_cols=90 Identities=10% Similarity=0.148 Sum_probs=60.3
Q ss_pred ccceEEEEEEEEeeCCCCCCCCCCCcEEEEEEC------CeEEEeecccCCCCCccccEEEEEeeC---C-CCcEEEEEE
Q 044346 10 TSLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMA------KENIKIRFIGNNVNPEWNEVFPFSTTY---P-NVPIMLSVC 79 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~------~~~~~t~~~~~~~~P~w~e~~~~~~~~---~-~~~l~~~v~ 79 (159)
.....+.|+|..+.++... ...+.|+.+.+- .....|..+....+|.|||.+.|.+.- | +..|.|+||
T Consensus 214 ~~~~~f~i~i~~~~~~~~~--~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 214 SLEQPFSIELIEGRKVNAD--ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp TCCSEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred hcCCceEEEEEEecccCCC--CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 4456789999999988653 345667776553 234455555556789999999998664 2 568999999
Q ss_pred EccCC--C----------CCCccEEEEEeCccch
Q 044346 80 DHDSF--T----------KDDRMKDAKIDIREYM 101 (159)
Q Consensus 80 d~~~~--~----------~d~~lG~~~i~l~~l~ 101 (159)
+.... + .+..+|-+.++|-+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 85321 1 2348899999887744
No 59
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=91.99 E-value=2 Score=37.21 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=60.7
Q ss_pred ccceEEEEEEEEeeCCCCCCCCCCCcEEEEEEC------CeEEEeecccCCCCCccccEEEEEeeC----CCCcEEEEEE
Q 044346 10 TSLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMA------KENIKIRFIGNNVNPEWNEVFPFSTTY----PNVPIMLSVC 79 (159)
Q Consensus 10 ~~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~------~~~~~t~~~~~~~~P~w~e~~~~~~~~----~~~~l~~~v~ 79 (159)
.....+.|+|..+.++........+.|+.+.+- .....|+.+. ..+|.|||.+.|.+.- .+..|.|+||
T Consensus 352 ~~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 352 VINSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp GCCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred hCCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 345678999999887764333345678877664 2334444343 4577899999998654 2679999999
Q ss_pred EccCC----CCCCccEEEEEeCccchh
Q 044346 80 DHDSF----TKDDRMKDAKIDIREYMK 102 (159)
Q Consensus 80 d~~~~----~~d~~lG~~~i~l~~l~~ 102 (159)
+-... .....+|-+.++|-+...
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~~~ 457 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDYTD 457 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCTTC
T ss_pred EecCccCcccccceeEEeeeeeEccCC
Confidence 85532 123579999999887543
No 60
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=87.54 E-value=5.7 Score=34.02 Aligned_cols=92 Identities=11% Similarity=0.017 Sum_probs=55.9
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCcEEEEEEC--CeE---EEeecccCCCCCccccEEEEEeeC---C-CCcEEEEEEEc
Q 044346 11 SLLSLRLRIKQGVNLAIHDHSGSDPCVFVMMA--KEN---IKIRFIGNNVNPEWNEVFPFSTTY---P-NVPIMLSVCDH 81 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~~~--~~~---~~t~~~~~~~~P~w~e~~~~~~~~---~-~~~l~~~v~d~ 81 (159)
....+.|.|..+...........+.|+.+.+- .+. ..|..+.-+.+|.|||.+.|.+.- | +..|.|+||+.
T Consensus 216 ~~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 216 CDRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CCSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred ccCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 34567888887754221122345667775443 221 234444446679999999988654 2 56899999974
Q ss_pred cCCC----------------CCCccEEEEEeCccchh
Q 044346 82 DSFT----------------KDDRMKDAKIDIREYMK 102 (159)
Q Consensus 82 ~~~~----------------~d~~lG~~~i~l~~l~~ 102 (159)
...+ ....+|-+.++|-+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTTS
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 3221 23478999888877543
No 61
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=82.92 E-value=1.3 Score=38.28 Aligned_cols=89 Identities=10% Similarity=0.073 Sum_probs=55.5
Q ss_pred cceEEEEEEEEeeCCCCCCCCCCCcEEEEE--ECC----eEEEeecccCCCCCccccEEEEEeeCC----CCcEEEEEEE
Q 044346 11 SLLSLRLRIKQGVNLAIHDHSGSDPCVFVM--MAK----ENIKIRFIGNNVNPEWNEVFPFSTTYP----NVPIMLSVCD 80 (159)
Q Consensus 11 ~~~~L~v~v~~a~~L~~~~~~~~dpy~~v~--~~~----~~~~t~~~~~~~~P~w~e~~~~~~~~~----~~~l~~~v~d 80 (159)
....+.|+|..+.++... ...+.|+.+. -+. ....|+.+.-..+|.|||.+.|.+.-. +..|.|+||+
T Consensus 351 ~~~~f~i~i~~~~~~~~~--~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE--ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC--SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred cCCCEEEEEEEeccCCCC--CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 356788999988887653 2345565543 332 233454444467899999999987652 5689999998
Q ss_pred ccCC----------------------CCCCccEEEEEeCccch
Q 044346 81 HDSF----------------------TKDDRMKDAKIDIREYM 101 (159)
Q Consensus 81 ~~~~----------------------~~d~~lG~~~i~l~~l~ 101 (159)
.... ..+..+|-+.++|-+..
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp C------------------------------CCEEEEESBCTT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 5210 01238888888877644
No 62
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=29.41 E-value=94 Score=18.58 Aligned_cols=31 Identities=6% Similarity=0.086 Sum_probs=21.5
Q ss_pred CcccEEEEEEEEEeCCCCCc-eEEEEEecccc
Q 044346 124 IECGKLQVQLRYCNLPGSKG-FIMFYECSSLC 154 (159)
Q Consensus 124 ~~~G~l~l~l~~~~~~~~~~-l~~~~~~~~l~ 154 (159)
.+.+++.+++.+.|.-...+ |++-..|..|.
T Consensus 60 ~pg~~~~~~~~~~P~~~G~~~L~a~f~s~~l~ 91 (102)
T 2xzz_A 60 GGNETVTLRQSFVPVRPGPRQLIASLDSPQLS 91 (102)
T ss_dssp CTTCEEEEEEEECCCSCSSCCCEEEEECGGGG
T ss_pred CCCCEEEEEEEEecCcccceEEEEEEECCccc
Confidence 66788899998885433333 37778887774
No 63
>2kzb_A Autophagy-related protein 19; selective autophagy, ATG19, alpha-mannosidase, protein trans; NMR {Saccharomyces cerevisiae}
Probab=22.85 E-value=96 Score=18.63 Aligned_cols=40 Identities=5% Similarity=0.159 Sum_probs=28.6
Q ss_pred CccccEEEEEeeCCCCcEEEEEEEccCCCCCCccEEEEEeCcc
Q 044346 57 PEWNEVFPFSTTYPNVPIMLSVCDHDSFTKDDRMKDAKIDIRE 99 (159)
Q Consensus 57 P~w~e~~~~~~~~~~~~l~~~v~d~~~~~~d~~lG~~~i~l~~ 99 (159)
|.-+..+++.+...+..|.|.+|+..+. -+-|-|.+.+.+
T Consensus 7 ~pn~~sL~Itvs~rDnsL~F~lyNntn~---~lpGnCtl~fs~ 46 (118)
T 2kzb_A 7 PPNERSLQITMNQRDNSLYFQLFNNTNS---VLAGNCKLKFTD 46 (118)
T ss_dssp CSSCCCEEEEEEEETTEEEEEEEECSSS---CCCSSCEECCCS
T ss_pred CCCCccEEEEEecCCCeEEEEEecCCce---eccCccEEEEec
Confidence 3334567788887788999999987643 456777777655
No 64
>4e0e_A Putative uncharacterized protein; DUF4450 family, structural genomics, joint center for struct genomics, JCSG; 2.90A {Bacteroides thetaiotaomicron}
Probab=20.79 E-value=1.3e+02 Score=20.15 Aligned_cols=39 Identities=23% Similarity=0.345 Sum_probs=25.7
Q ss_pred eEEeecCCCcccEEEEEEEEEeCCCCCceEEEEEeccccccc
Q 044346 116 DLDLKLTNIECGKLQVQLRYCNLPGSKGFIMFYECSSLCSSM 157 (159)
Q Consensus 116 ~~~~~l~~~~~G~l~l~l~~~~~~~~~~l~~~~~~~~l~~~~ 157 (159)
..|++.++ ..| .|++..+..++..|+|.-+.+.++...+
T Consensus 22 s~wLd~~D-G~g--~L~I~vlAl~D~eG~I~ev~~~~lp~~~ 60 (178)
T 4e0e_A 22 SHWLAPQE-KVK--GIAFRWKALPDTRGFILEVAVTSLQQAD 60 (178)
T ss_dssp EEECCTTC-CBT--TEEEEEEECSSSSEEEEEEEECCCSSCS
T ss_pred cEeeeccC-CCc--eEEEEEEECCCCCcEEEEEEecCCCCCc
Confidence 44655544 344 4566667768888888888888886543
Done!