BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044348
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H174|IAA31_ARATH Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31
PE=2 SV=2
Length = 158
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 19/108 (17%)
Query: 34 LNLGLSI---SLSPEQRQRLDWPPIKSLLRSTLN--KLAEKADENDGRHHHSQQYGSLFV 88
+NL LS+ S SP++ R DWPPIKS LR TL +L + D+ SLFV
Sbjct: 27 VNLSLSLTFPSTSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDT-----------SLFV 75
Query: 89 KVYMEGIPIGRKLDLFAHHGYNALVTTLSHMFTIKTTNILCKSYYSQH 136
KVYMEG+PIGRKLDL GY +L+ LSHMF T+I+C + +H
Sbjct: 76 KVYMEGVPIGRKLDLCVFSGYESLLENLSHMF---DTSIICGNRDRKH 120
>sp|Q38829|IAA11_ARATH Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11
PE=1 SV=1
Length = 246
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 41 SLSPEQRQRLDWPPIKSL-LRSTLNKLAEKADE----------NDGRHHHSQQYGSLFVK 89
S++ Q + WPPI++ + S +N+ A E N R ++ S+FVK
Sbjct: 81 SMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVK 140
Query: 90 VYMEGIPIGRKLDLFAHHGYNALVTTLSHMF 120
V M+GIPIGRK+DL AH Y +L TL MF
Sbjct: 141 VTMDGIPIGRKIDLNAHKCYESLSNTLEEMF 171
>sp|Q38827|IAA9_ARATH Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1
SV=1
Length = 338
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 46 QRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFA 105
+ Q + WPP++S ++TL + +DE DGR G+LFVKV M+G P RK+DL +
Sbjct: 181 KAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGS----GALFVKVSMDGAPYLRKVDLRS 236
Query: 106 HHGYNALVTTLSHMFT 121
+ Y L + L MFT
Sbjct: 237 YTNYGELSSALEKMFT 252
>sp|Q6Z5M0|IAA8_ORYSJ Auxin-responsive protein IAA8 OS=Oryza sativa subsp. japonica
GN=IAA8 PE=2 SV=2
Length = 205
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 23 ERRDLMSTCTDLNLGLSISLSPEQRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQ 82
+RR L+ST DL LGL++S P SL +T+ + G +
Sbjct: 49 KRRSLIST--DLRLGLTLSSVVHIDGNNPSTPRSSLTTATVTA------DRGGGGGGHGR 100
Query: 83 YGSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMFTIKTT 125
SLFVKVYMEG+PIGRKLDL GY LV L+ MF T
Sbjct: 101 RRSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASIT 143
>sp|P0C127|IAA16_ORYSJ Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica
GN=IAA16 PE=2 SV=1
Length = 228
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 50 LDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYG---SLFVKVYMEGIPIGRKLDLFAH 106
+ WPP++S R+ + + GR + G + FVKV M+G+PIGRK+DL AH
Sbjct: 59 VGWPPVRSFRRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAH 118
Query: 107 HGYNALVTTLSHMF 120
GY L + +F
Sbjct: 119 GGYGELSAAVDRLF 132
>sp|Q9M1R4|IAA30_ARATH Auxin-responsive protein IAA30 OS=Arabidopsis thaliana GN=IAA30
PE=2 SV=1
Length = 172
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 84 GSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMFT 121
GS +VKV MEG+PIGRK+DL + +GY+ L+TTL +MF
Sbjct: 81 GSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFN 118
>sp|A2ZRY8|IAA4_ORYSJ Auxin-responsive protein IAA4 OS=Oryza sativa subsp. japonica
GN=IAA4 PE=2 SV=1
Length = 203
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 63/134 (47%), Gaps = 32/134 (23%)
Query: 15 STAVSNHNERRDLMSTCTDLNLGLS----------------------ISLSPEQRQ-RLD 51
ST S RRDL TDL LGLS I +P Q D
Sbjct: 24 STTSSAATARRDL---STDLRLGLSLSTSSSSSLLQAAAAAAAADDSIPSTPRNSQVHAD 80
Query: 52 WPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNA 111
WPPIK LRS L K + +++ +LFVKVYMEG+PIGRKLDL GY++
Sbjct: 81 WPPIKPFLRSALQKASAAGGGG------ARRRRTLFVKVYMEGVPIGRKLDLLLLDGYDS 134
Query: 112 LVTTLSHMFTIKTT 125
L+ L HMF T
Sbjct: 135 LLIKLCHMFKTPIT 148
>sp|A2WNM0|IAA4_ORYSI Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica GN=IAA4
PE=2 SV=1
Length = 203
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 63/134 (47%), Gaps = 32/134 (23%)
Query: 15 STAVSNHNERRDLMSTCTDLNLGLS----------------------ISLSPEQRQ-RLD 51
ST S RRDL TDL LGLS I +P Q D
Sbjct: 24 STTSSAATARRDL---STDLRLGLSLSTSSSSSLLQAAAAAAAADDSIPSTPRNSQVHAD 80
Query: 52 WPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNA 111
WPPIK LRS L K + +++ +LFVKVYMEG+PIGRKLDL GY++
Sbjct: 81 WPPIKPFLRSALQKASAAGGGG------ARRRRTLFVKVYMEGVPIGRKLDLLLLDGYDS 134
Query: 112 LVTTLSHMFTIKTT 125
L+ L HMF T
Sbjct: 135 LLIKLCHMFKTPIT 148
>sp|P49679|IAA4_PEA Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1
Length = 189
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 15 STAVSNHNERR---------DLMSTCTDLNLGLSISLSPEQRQRL-DWPPIKSLLRSTLN 64
S+ V N+N+R+ + D ++ S S +P + ++ WPPI+S +++L
Sbjct: 27 SSVVKNNNKRQLPQTSEESVSISKVTNDEHIVESSSAAPPAKAKIVGWPPIRSYRKNSL- 85
Query: 65 KLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMFTIKT 124
H G +FVKV M+G P RK+DL + GY+ L+ L MF +
Sbjct: 86 --------------HEADVGGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTI 131
Query: 125 TNILCKSYYSQHFCALTF 142
+ Y A T+
Sbjct: 132 GEYSEREGYKGSEYAPTY 149
>sp|Q69TU6|IAA22_ORYSJ Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica
GN=IAA22 PE=2 SV=1
Length = 265
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Query: 36 LGLSISLSPEQR-----QRLDWPPIKSLLRST-----------LNKLAEKADENDGRHHH 79
+G + S E R Q + WPP+++ ++ +NK+ +DE G
Sbjct: 23 MGAGWNESGENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDA 82
Query: 80 SQQY---GSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMF 120
+Q+ ++FVKV +EG +GRK+DL AH Y++L L MF
Sbjct: 83 AQERRPSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMF 126
>sp|Q38830|IAA12_ARATH Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12
PE=1 SV=1
Length = 239
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 21/106 (19%)
Query: 44 PEQRQRLDWPPI-----KSLLRSTLNKLAEKADENDGRHH--------------HSQQYG 84
P Q + WPPI SL+ + K A +A+E DG + + G
Sbjct: 65 PRSSQVVGWPPIGLHRMNSLVNNQAMKAA-RAEEGDGEKKVVKNDELKDVSMKVNPKVQG 123
Query: 85 SLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMFTIKTTNILCK 130
FVKV M+G+ IGRK+D+ AH Y L TL MF T C+
Sbjct: 124 LGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF-FGMTGTTCR 168
>sp|Q38826|IAA8_ARATH Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=1
SV=1
Length = 321
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 48 QRLDWPPIKSLLRSTL-NKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAH 106
Q + WPPI+S ++T+ + ++ DE DG+ G LFVKV M+G P RK+DL +
Sbjct: 165 QVVGWPPIRSYRKNTMASSTSKNTDEVDGKPG----LGVLFVKVSMDGAPYLRKVDLRTY 220
Query: 107 HGYNALVTTLSHMFT 121
Y L + L MF+
Sbjct: 221 TSYQQLSSALEKMFS 235
>sp|Q38822|IAA3_ARATH Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1
SV=1
Length = 189
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 15/116 (12%)
Query: 9 CSSSIDSTAVSNHNERRDLMSTCTDLNLGLSISLS----PEQRQRLDWPPIKSLLRSTLN 64
C + + +N+N+R ++ST T+ + S + P + Q + WPP++S + N
Sbjct: 23 CEAKERVSCCNNNNKR--VLSTDTEKEIESSSRKTETSPPRKAQIVGWPPVRSYRK---N 77
Query: 65 KLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMF 120
+ K +E++ H Q ++VKV M+G P RK+DL + GY+ L+ L MF
Sbjct: 78 NIQSKKNESE---HEGQ---GIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMF 127
>sp|Q0JKG7|IAA5_ORYSJ Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica
GN=IAA5 PE=2 SV=1
Length = 271
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 48 QRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHH 107
Q + WPP+++ + N LA A + G + + G L+VKV M+G P RK+DL +
Sbjct: 117 QVVGWPPVRNYRK---NTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYS 173
Query: 108 GYNALVTTLSHMFT 121
Y L L MF+
Sbjct: 174 SYEDLSMALEKMFS 187
>sp|Q75GB1|IAA17_ORYSJ Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica
GN=IAA17 PE=2 SV=1
Length = 257
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 52 WPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNA 111
WPPI+S ++T+ K+ + D Q G L+VKV M+G P RK+DL + Y
Sbjct: 120 WPPIRSYRKNTMATNQLKSSKEDAEAKQGQ--GFLYVKVSMDGAPYLRKVDLKTYKNYKD 177
Query: 112 LVTTLSHMFTIKTTN 126
L T L MF TT
Sbjct: 178 LSTALEKMFIGFTTG 192
>sp|O24542|AX22D_VIGRR Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D
PE=2 SV=1
Length = 193
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 18/123 (14%)
Query: 5 LSQPCSSSIDSTAVSNHNER-------RDLMSTCTDLNLGLSISLSPEQRQRLDWPPIKS 57
L P S + A + N+R + +S +D+ ++ + P + Q + WPPI+S
Sbjct: 21 LGLPGSDEPEKRATARSNKRSSPEASDEESISNGSDVTKEDNV-VPPAKAQVVGWPPIRS 79
Query: 58 LLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLS 117
++ + + E+ E +G ++VKV M G P RK+DL + Y L+ L
Sbjct: 80 YRKNNVQQKKEEESEGNG----------MYVKVSMAGAPYLRKIDLKVYKSYPELLKALE 129
Query: 118 HMF 120
+MF
Sbjct: 130 NMF 132
>sp|A2WTQ5|IAA5_ORYSI Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5
PE=2 SV=2
Length = 272
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 48 QRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHH 107
Q + WPP+++ + N LA A + G + + G L+VKV M+G P RK+DL +
Sbjct: 118 QVVGWPPVRNYRK---NTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYS 174
Query: 108 GYNALVTTLSHMFT 121
Y L L MF+
Sbjct: 175 SYEDLSMALEKMFS 188
>sp|P0C128|IAA25_ORYSJ Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica
GN=IAA25 PE=2 SV=1
Length = 246
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 48 QRLDWPPIKSLLRST-----------LNKLAEKADENDGRHHHSQQYGS---LFVKVYME 93
Q + WPP+++ ++ +NK+ +DE G +Q+ S +FVKV +E
Sbjct: 92 QLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLE 151
Query: 94 GIPIGRKLDLFAHHGYNALVTTLSHMF 120
G +GRK+DL AH Y++L L MF
Sbjct: 152 GYAVGRKIDLKAHRSYDSLSQALQSMF 178
>sp|O24410|IAA20_ARATH Auxin-responsive protein IAA20 OS=Arabidopsis thaliana GN=IAA20
PE=2 SV=2
Length = 175
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 84 GSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMF 120
GS +VKV MEG+PIGRK+DL + +GY L+ TL MF
Sbjct: 83 GSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMF 119
>sp|O24408|IAA18_ARATH Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18
PE=1 SV=2
Length = 267
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 50 LDWPPIKS----LLRSTLNKLAEKADENDG------------RHHHSQQYGSLFVKVYME 93
+ WPP++S L + +KL + ++G + ++ G +FVK+ M
Sbjct: 98 VGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMY 157
Query: 94 GIPIGRKLDLFAHHGYNALVTTLSHMF 120
G+PIGRK+DL AH+ Y L T+ +F
Sbjct: 158 GVPIGRKVDLSAHNSYEQLSFTVDKLF 184
>sp|P32294|AX22B_VIGRR Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B
PE=2 SV=1
Length = 196
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 39 SISLSPEQRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIG 98
++S P + + + WPPI+S ++++ + E DG +FVKV M+G P
Sbjct: 68 TVSAPPPKAKIVGWPPIRSYRKNSVQE-----GEGDG----------IFVKVSMDGAPYL 112
Query: 99 RKLDLFAHHGYNALVTTLSHMFTIKTTNILCKSYYSQHFCALTF 142
RK+DL + GY L+ L MF + + Y A T+
Sbjct: 113 RKVDLKVYGGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTY 156
>sp|Q6AT33|IAA19_ORYSJ Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica
GN=IAA19 PE=2 SV=1
Length = 281
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 48 QRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHH 107
Q + WPP++S + N LA A + G + G +VKV M+G P RK+DL +
Sbjct: 127 QVVGWPPVRSYRK---NTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYS 183
Query: 108 GYNALVTTLSHMFT 121
Y L L MF+
Sbjct: 184 SYEDLSLALEKMFS 197
>sp|Q5Z749|IAA21_ORYSJ Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica
GN=IAA21 PE=2 SV=1
Length = 266
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 50 LDWPPIKSLLRSTLNKLAEKA--DENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHH 107
+ WPPI+S ++T+ +++ A ++DG + G L+VKV M+G P RK+DL +
Sbjct: 110 VGWPPIRSYRKNTM-AMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYK 168
Query: 108 GYNALVTTLSHMFT 121
Y L L MF+
Sbjct: 169 NYKELSLALEKMFS 182
>sp|Q8LAL2|IAA26_ARATH Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26
PE=1 SV=2
Length = 269
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 50 LDWPPIKS----LLRSTLNKLAEKA-------DENDGRHHHSQQYGSLFVKVYMEGIPIG 98
+ WPP++S L ++ +KL ++ +DG + +FVK+ M+G+PIG
Sbjct: 105 VGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIG 164
Query: 99 RKLDLFAHHGYNALVTTLSHMF 120
RK+DL A++ Y L + +F
Sbjct: 165 RKVDLNAYNSYEQLSFVVDKLF 186
>sp|P33077|IAA4_ARATH Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=1
SV=2
Length = 186
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 37 GLSISLSPEQRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIP 96
G + + SP + Q + WPP++S + N + K E++G+ + +VKV M+G P
Sbjct: 51 GKTETASPPKAQIVGWPPVRSYRK---NNVQTKKSESEGQGN--------YVKVSMDGAP 99
Query: 97 IGRKLDLFAHHGYNALVTTLSHMFTIKTTNILCKSYY 133
RK+DL + Y L+ +L +MF + Y
Sbjct: 100 YLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGY 136
>sp|Q38831|IAA13_ARATH Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13
PE=1 SV=2
Length = 247
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 20/91 (21%)
Query: 48 QRLDWPPIKS-LLRSTLNKLAEKA---DENDGRH--------------HHSQQYGSLFVK 89
Q + WPPI S + S +N A K+ +E G+ + Q G F+K
Sbjct: 76 QVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG--FIK 133
Query: 90 VYMEGIPIGRKLDLFAHHGYNALVTTLSHMF 120
V M+G+ IGRK+DL AH Y L TL MF
Sbjct: 134 VNMDGVAIGRKVDLNAHSSYENLAQTLEDMF 164
>sp|Q0DWF2|IAA10_ORYSJ Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica
GN=IAA10 PE=2 SV=2
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 50 LDWPPIKSL-LRSTLNKLAEKADENDGRH------------HHSQQYGSL--FVKVYMEG 94
+ WPPI+ + S N+ E E D + ++ G + +VKV M+G
Sbjct: 113 VGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDG 172
Query: 95 IPIGRKLDLFAHHGYNALVTTLSHMFTIKTTNILCKSY 132
IGRK+DL AH Y L L MFT K + LC S+
Sbjct: 173 EVIGRKVDLNAHRSYKTLALALELMFT-KPSIGLCASH 209
>sp|Q9LG86|IAA2_ORYSJ Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica
GN=IAA2 PE=2 SV=1
Length = 238
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 52 WPPIKSLLRSTLNKL-----------------AEKADENDGRHHHSQQYGSLFVKVYMEG 94
WPP++S R+ + +KA ++ G +FVK+ M+G
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEK------GMFVKINMDG 127
Query: 95 IPIGRKLDLFAHHGYNALVTTLSHMF 120
+PIGRK+DL A+ GY L + +F
Sbjct: 128 VPIGRKVDLAAYGGYAQLSAAVDKLF 153
>sp|A2XB18|IAA10_ORYSI Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica
GN=IAA10 PE=2 SV=2
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 50 LDWPPIKSL-LRSTLNKLAEKADENDGRH------------HHSQQYGSL--FVKVYMEG 94
+ WPPI+ + S N+ E E D + ++ G + +VKV M+G
Sbjct: 113 VGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDG 172
Query: 95 IPIGRKLDLFAHHGYNALVTTLSHMFTIKTTNILCKSY 132
IGRK+DL AH Y L L MFT K + LC S+
Sbjct: 173 EVIGRKVDLNAHRSYKTLALALELMFT-KPSIGLCASH 209
>sp|Q9XFM0|IAA28_ARATH Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28
PE=1 SV=1
Length = 175
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 50 LDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGY 109
+ WPP++S R+ +L E+ + S + L+VK+ MEG+PIGRK++L A++ Y
Sbjct: 50 VGWPPVRSSRRNLTAQLKEEM-----KKKESDEEKELYVKINMEGVPIGRKVNLSAYNNY 104
Query: 110 NALVTTLSHMFTIKTTNILCKSY 132
L + +F+ K + L + Y
Sbjct: 105 QQLSHAVDQLFSKKDSWDLNRQY 127
>sp|O24543|AX22E_VIGRR Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E
PE=2 SV=1
Length = 203
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 41 SLSPEQRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRK 100
S+ P + Q + WPPI+S +++L + +K ++ DG +++KV M G P RK
Sbjct: 73 SVQPAKVQVVGWPPIRSFRKNSLQQ--KKVEQGDGT--------GMYLKVSMAGAPYLRK 122
Query: 101 LDLFAHHGYNALVTTLSHMF 120
+DL + Y L+ L ++F
Sbjct: 123 IDLKVYKSYPELLKALQNLF 142
>sp|Q9ZSY8|IAA27_ARATH Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27
PE=1 SV=1
Length = 305
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 46 QRQRLDWPPIKSLLRSTL-----NKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRK 100
+ Q + WPPI+S ++++ K ++ + + L+VKV MEG P RK
Sbjct: 141 KAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRK 200
Query: 101 LDLFAHHGYNALVTTLSHMFT 121
+DL + Y L + L MF+
Sbjct: 201 IDLKTYKSYLELSSALEKMFS 221
>sp|Q10D34|IAA13_ORYSJ Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica
GN=IAA13 PE=2 SV=1
Length = 236
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 48 QRLDWPPIKSLLRSTL------NKLAEKADENDGR--HHHSQQYGSLFVKVYMEGIPIGR 99
Q + WPP++S R+ + +K E+AD+ + + S S FVKV M+G P R
Sbjct: 86 QAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLR 145
Query: 100 KLDLFAHHGYNALVTTLSHMF 120
K+DL ++ Y L L MF
Sbjct: 146 KVDLKMYNSYKDLSLALQKMF 166
>sp|A2XLV9|IAA13_ORYSI Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica
GN=IAA13 PE=2 SV=1
Length = 236
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 48 QRLDWPPIKSLLRSTL------NKLAEKADENDGR--HHHSQQYGSLFVKVYMEGIPIGR 99
Q + WPP++S R+ + +K E+AD+ + + S S FVKV M+G P R
Sbjct: 86 QAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLR 145
Query: 100 KLDLFAHHGYNALVTTLSHMF 120
K+DL ++ Y L L MF
Sbjct: 146 KVDLKMYNSYKDLSLALQKMF 166
>sp|Q7Y1H8|IAA14_ORYSJ Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica
GN=IAA14 PE=2 SV=1
Length = 195
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 43 SPEQR-QRLDWPPIKSLLRSTLNKLAEKA----------DENDGRHHHSQQYGSLFVKVY 91
SP + Q + WPP+ S RST + + + GR + G L+VKV
Sbjct: 58 SPASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKG---GGLYVKVS 114
Query: 92 MEGIPIGRKLDLFAHHGYNALVTTLSHMF 120
M+G P RK+DL + GY L L +F
Sbjct: 115 MDGAPYLRKVDLRMYGGYRELRDALDALF 143
>sp|Q5NB25|IAA3_ORYSJ Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica
GN=IAA3 PE=2 SV=1
Length = 263
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 52 WPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNA 111
WPPI+S ++T+ K+++ D Q G L+VKV M+G P RK+DL + Y
Sbjct: 127 WPPIRSYRKNTMATNQIKSNKEDVDAKQGQ--GFLYVKVSMDGAPYLRKVDLKTYKNYKD 184
Query: 112 LVTTLSHMF 120
+ L MF
Sbjct: 185 MSLGLEKMF 193
>sp|Q8LQ74|IAA6_ORYSJ Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica
GN=IAA6 PE=2 SV=1
Length = 335
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 52 WPPIKSLLRSTLNKLAEK---ADENDGRHHHSQQ--YGSLFVKVYMEGIPIGRKLDLFAH 106
WPPI+S R+ + + K +ND + + VK+ M+GIPIGRK+DL A+
Sbjct: 179 WPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAY 238
Query: 107 HGYNALVTTLSHMF 120
+ Y+ L + + +F
Sbjct: 239 NSYDGLSSAVKQLF 252
>sp|Q38824|IAA6_ARATH Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1
SV=2
Length = 189
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 10 SSSIDSTAVSNHNERRDLMSTCTDLNLGLSISLSPEQRQRLDWPPIKSLLRSTLNKLAEK 69
S + S+A+ NE ++S+ D +L + S Q + WPP+ S R N+ A K
Sbjct: 39 SDMMTSSALDTENEN-SVVSSVEDESLPVVKS------QAVGWPPVCSYRRKKNNEEASK 91
Query: 70 ADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMF 120
A +VKV M+G+P RK+DL + + Y LVT L ++F
Sbjct: 92 A--------------IGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLF 128
>sp|Q38832|IAA14_ARATH Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14
PE=1 SV=2
Length = 228
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 41 SLSPEQRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGS---LFVKVYMEGIPI 97
S P + Q + WPP+++ ++ + A++ G + G FVKV M+G P
Sbjct: 69 SKPPAKAQVVGWPPVRNYRKNVM------ANQKSGEAEEAMSSGGGTVAFVKVSMDGAPY 122
Query: 98 GRKLDLFAHHGYNALVTTLSHMFT 121
RK+DL + Y L L+ MF+
Sbjct: 123 LRKVDLKMYTSYKDLSDALAKMFS 146
>sp|P13089|AUX28_SOYBN Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1
Length = 243
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 44 PEQRQRLDWPPIKSLLRSTL---NKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRK 100
P + Q + WPP++S ++ L + E++++N + FVKV M+G P RK
Sbjct: 86 PAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNAS-------FVKVSMDGAPYLRK 138
Query: 101 LDLFAHHGYNALVTTLSHMFT 121
+DL + Y L +L MF+
Sbjct: 139 VDLKMYKSYRELSDSLGKMFS 159
>sp|P0C133|IAA31_ORYSJ Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica
GN=IAA31 PE=2 SV=1
Length = 197
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 48 QRLDWPPIKSLLRSTLNKLAEKADENDGRHH---HSQQ------YGSLFVKVYMEGIPIG 98
Q + WPP++S +S L +QQ G LFVKV M+G P
Sbjct: 53 QVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYL 112
Query: 99 RKLDLFAHHGYNALVTTLSHMF 120
RK+DL + GY L L MF
Sbjct: 113 RKIDLKVYKGYRELREALEAMF 134
>sp|Q5W670|IAA18_ORYSJ Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica
GN=IAA18 PE=2 SV=1
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 LDWPPIKSLLRSTLNKLAEKA------DENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDL 103
+ WPPI+S R+ N + K DE D + + L VK+ M+GIPIGRK+DL
Sbjct: 169 VGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPL-VKINMDGIPIGRKVDL 227
Query: 104 FAHHGYNALVTTLSHMF 120
+ Y L + + +F
Sbjct: 228 QIYDSYQKLSSAVEELF 244
>sp|O24409|IAA19_ARATH Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19
PE=1 SV=2
Length = 197
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 40 ISLSPEQR-QRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIG 98
++ SP + Q + WPP+ S + +N + + + G +VKV M+G+P
Sbjct: 61 VNDSPAAKSQVVGWPPVCSYRK-----------KNSCKEASTTKVGLGYVKVSMDGVPYL 109
Query: 99 RKLDLFAHHGYNALVTTLSHMFTIKTTNILCK 130
RK+DL + GY+ L L +F + + K
Sbjct: 110 RKMDLGSSQGYDDLAFALDKLFGFRGIGVALK 141
>sp|Q69VE0|IAA23_ORYSJ Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica
GN=IAA23 PE=2 SV=1
Length = 193
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 43 SPEQRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLD 102
SP+ R + WPP+++ R+ L + + +A VKV ++G P RK+D
Sbjct: 57 SPKARA-VGWPPVRAYRRNALREDSARAK---------------LVKVAVDGAPYLRKVD 100
Query: 103 LFAHHGYNALVTTLSHMFT 121
L AH GY L+ L MF
Sbjct: 101 LAAHAGYAPLLRALHGMFA 119
>sp|P93830|IAA17_ARATH Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17
PE=1 SV=2
Length = 229
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 44 PEQRQRLDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDL 103
P + Q + WPP++S ++ + + + FVKV M+G P RK+DL
Sbjct: 78 PAKAQVVGWPPVRSYRKNVMVSC---------QKSSGGPEAAAFVKVSMDGAPYLRKIDL 128
Query: 104 FAHHGYNALVTTLSHMFT 121
+ Y+ L LS+MF+
Sbjct: 129 RMYKSYDELSNALSNMFS 146
>sp|Q9XED8|ARFI_ARATH Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=1 SV=1
Length = 638
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 60 RSTLNKLAEKAD----ENDGRHHHSQQYGSLF--VKVYMEGIPIGRKLDLFAHHGYNALV 113
+S ++K++E+ E + S+Q S KV M+G+P+GR +DL A GYN L+
Sbjct: 492 KSEISKVSEEKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELI 551
Query: 114 TTLSHMFTIK 123
+ +F IK
Sbjct: 552 DDIEKLFDIK 561
>sp|Q6ZL57|IAA24_ORYSJ Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica
GN=IAA24 PE=2 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 41 SLSPEQRQRLDWPPIKSLLRSTLNKLAEKA----DENDGRHHHSQQYGSLFVKVYMEGIP 96
+ +P + Q + WPP+++ R+T ++ A A D + QQ G L+VKV M+G P
Sbjct: 81 TAAPAKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAP 140
Query: 97 IGRKLDLFAHHGYNALVTTLSHMFT 121
RK+DL GY L L +FT
Sbjct: 141 YLRKVDLKMCKGYRELREALDLLFT 165
>sp|Q9FX25|ARFM_ARATH Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3
Length = 621
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 88 VKVYMEGIPIGRKLDLFAHHGYNALVTTLSHMFTIK 123
+KV+M+G+ I R +DL A HGYN L+ L +F +K
Sbjct: 511 IKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLK 546
>sp|Q6K846|IAA9_ORYSJ Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica
GN=IAA9 PE=2 SV=1
Length = 182
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 20/69 (28%)
Query: 52 WPPIKSLLRSTLNKLAEKADENDGRHHHSQQYGSLFVKVYMEGIPIGRKLDLFAHHGYNA 111
WPP+ S R+ G+ +VKV EG IGRK+DL H Y+
Sbjct: 79 WPPVSSARRAC--------------------GGANYVKVKKEGDAIGRKVDLALHSSYDE 118
Query: 112 LVTTLSHMF 120
L TL+ MF
Sbjct: 119 LAATLARMF 127
>sp|Q6H543|IAA7_ORYSJ Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica
GN=IAA7 PE=2 SV=1
Length = 300
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 50 LDWPPIKSLLRSTLNKLAEKADENDGRHHHSQQ--YGSLFVKVYMEGIPIGRKLDLFAHH 107
+ WPP+++ R+ + +G+ + + F+K+ M+G+PIGRK+DL A
Sbjct: 140 VGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFD 199
Query: 108 GYNALVTTLSHMF 120
Y L + +F
Sbjct: 200 SYEKLSLAVDKLF 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,059,190
Number of Sequences: 539616
Number of extensions: 1881598
Number of successful extensions: 4679
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4535
Number of HSP's gapped (non-prelim): 108
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)