Query 044349
Match_columns 123
No_of_seqs 124 out of 1101
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 02:27:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044349.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044349hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 99.7 9.8E-16 2.1E-20 103.8 9.7 117 1-123 180-301 (489)
2 PLN03234 cytochrome P450 83B1; 99.2 7E-11 1.5E-15 80.9 9.1 118 2-123 183-303 (499)
3 PLN02971 tryptophan N-hydroxyl 99.2 2E-10 4.3E-15 79.5 9.4 120 1-123 213-342 (543)
4 PLN02183 ferulate 5-hydroxylas 99.2 3.2E-10 6.9E-15 78.0 10.1 122 1-123 186-319 (516)
5 PLN02687 flavonoid 3'-monooxyg 99.1 1E-09 2.2E-14 75.6 10.0 121 2-123 187-312 (517)
6 PLN00110 flavonoid 3',5'-hydro 99.1 7.4E-10 1.6E-14 76.1 9.3 117 2-123 185-304 (504)
7 PLN02966 cytochrome P450 83A1 99.1 2E-09 4.2E-14 74.0 9.3 118 2-123 184-304 (502)
8 PLN03112 cytochrome P450 famil 99.0 3E-09 6.4E-14 73.3 9.8 119 2-123 186-311 (514)
9 PLN02655 ent-kaurene oxidase 99.0 3.4E-09 7.4E-14 72.2 9.4 112 2-123 156-277 (466)
10 PLN02290 cytokinin trans-hydro 99.0 4.6E-09 1E-13 72.3 9.2 118 2-123 213-331 (516)
11 PLN00168 Cytochrome P450; Prov 99.0 9.4E-09 2E-13 70.9 9.6 120 2-123 192-321 (519)
12 PF00067 p450: Cytochrome P450 98.9 2.5E-09 5.4E-14 71.7 6.1 117 2-123 155-277 (463)
13 PLN03018 homomethionine N-hydr 98.9 4.6E-08 9.9E-13 67.8 10.3 88 33-123 240-329 (534)
14 KOG0158 Cytochrome P450 CYP3/C 98.8 2.9E-08 6.3E-13 67.8 7.7 115 2-123 186-309 (499)
15 PTZ00404 cytochrome P450; Prov 98.8 1.1E-07 2.3E-12 65.2 9.0 113 2-123 180-298 (482)
16 KOG0157 Cytochrome P450 CYP4/C 98.7 5.5E-08 1.2E-12 66.9 5.9 113 1-123 187-306 (497)
17 PLN02169 fatty acid (omega-1)- 98.6 7E-07 1.5E-11 61.6 10.0 118 1-123 188-316 (500)
18 PLN03195 fatty acid omega-hydr 98.5 8.6E-07 1.9E-11 61.3 8.5 70 50-123 235-307 (516)
19 PLN02394 trans-cinnamate 4-mon 98.5 1.3E-06 2.8E-11 60.2 8.6 54 64-123 253-308 (503)
20 KOG0159 Cytochrome P450 CYP11/ 98.5 1.5E-06 3.2E-11 59.3 8.0 110 1-123 213-331 (519)
21 PLN02500 cytochrome P450 90B1 98.5 1.8E-06 3.9E-11 59.4 8.6 65 50-123 229-294 (490)
22 PLN02936 epsilon-ring hydroxyl 98.5 1.7E-06 3.7E-11 59.5 8.4 113 2-123 168-293 (489)
23 PLN02738 carotene beta-ring hy 98.4 1.6E-06 3.5E-11 61.4 8.2 112 2-123 282-406 (633)
24 PLN02987 Cytochrome P450, fami 98.4 3.1E-06 6.8E-11 58.1 9.0 66 49-123 217-282 (472)
25 PLN02426 cytochrome P450, fami 98.4 2E-06 4.4E-11 59.4 7.7 106 2-123 195-308 (502)
26 PLN02302 ent-kaurenoic acid ox 98.4 5.1E-06 1.1E-10 57.1 9.1 69 51-123 234-302 (490)
27 PLN03141 3-epi-6-deoxocathaste 98.4 3.5E-06 7.6E-11 57.4 7.9 67 50-123 197-266 (452)
28 COG2124 CypX Cytochrome P450 [ 98.3 4.5E-06 9.8E-11 56.4 6.8 64 49-123 188-251 (411)
29 PLN02774 brassinosteroid-6-oxi 97.9 8.9E-05 1.9E-09 50.9 7.7 64 50-123 216-279 (463)
30 PLN02196 abscisic acid 8'-hydr 97.5 0.00081 1.8E-08 46.2 7.1 61 50-123 219-279 (463)
31 KOG0684 Cytochrome P450 [Secon 97.0 0.006 1.3E-07 41.7 7.3 78 34-123 211-288 (486)
32 COG1610 Uncharacterized conser 33.2 1.1E+02 0.0024 18.2 4.1 61 58-118 49-109 (148)
33 PF05949 DUF881: Bacterial pro 31.4 60 0.0013 19.1 2.4 20 103-122 40-59 (149)
34 PF14858 DUF4486: Domain of un 30.3 99 0.0021 22.7 3.6 20 103-122 332-352 (542)
35 PF04688 Phage_holin: Phage ly 28.6 73 0.0016 14.8 3.0 20 101-120 4-23 (47)
36 COG1843 FlgD Flagellar hook ca 26.0 92 0.002 19.9 2.7 32 82-115 31-62 (222)
37 PF15546 DUF4653: Domain of un 24.6 1.6E+02 0.0035 18.6 3.4 34 39-74 191-224 (239)
38 PLN02648 allene oxide synthase 23.6 79 0.0017 22.6 2.3 13 103-115 266-278 (480)
39 KOG2536 MAM33, mitochondrial m 22.9 2.3E+02 0.0049 18.7 3.9 48 14-64 214-262 (263)
40 COG4756 Predicted cation trans 22.7 75 0.0016 21.0 1.8 21 101-121 294-314 (367)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.66 E-value=9.8e-16 Score=103.75 Aligned_cols=117 Identities=31% Similarity=0.558 Sum_probs=92.8
Q ss_pred Ceeeecccccc-c--chhHHHHHHHHHHHHhcCCcchhhhh-hccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044349 1 MRIIAGKRYTS-Q--ESSDFQEQATNIFAFFGKLGASDALP-FLRWMD-IGGNERLMRKTAKEFDIVLQEWLDEHTMKRV 75 (123)
Q Consensus 1 ~~~~fG~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 75 (123)
|+++||+||+. + ...++.+++.+.....+.+.+.+++| |+.+++ ..+..++.+.....++.++.++|++|++..+
T Consensus 180 ~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~ 259 (489)
T KOG0156|consen 180 CRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIG 259 (489)
T ss_pred HHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 57899999983 2 33457888999999899888899999 777773 3466777777777899999999999988762
Q ss_pred cCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 76 SGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 76 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
. .+.+||+|.||...+++. .+. +|+++|...|.++++||+||
T Consensus 260 ~---~~~~D~vD~lL~~~~~~~--~~~-~t~~~i~~~~~dl~~AGtdT 301 (489)
T KOG0156|consen 260 D---EEGRDFVDALLKLMKEEK--AEG-LTDDHLKALILDLFLAGTDT 301 (489)
T ss_pred c---CCCCcHHHHHHHhhcccc--cCC-CCHHHHHHHHHHHHhcccch
Confidence 1 223899999998876431 112 99999999999999999998
No 2
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.25 E-value=7e-11 Score=80.88 Aligned_cols=118 Identities=26% Similarity=0.414 Sum_probs=78.3
Q ss_pred eeeeccccccc--chhHHHHHHHHHHHHhcCCcchhhhhhcccc-cccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 044349 2 RIIAGKRYTSQ--ESSDFQEQATNIFAFFGKLGASDALPFLRWM-DIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSGQ 78 (123)
Q Consensus 2 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 78 (123)
+++||.+++.. ...++.+.+.+.....+...+.+.+|++.++ .+.+..++..+..+.+++++.++++++++.....
T Consensus 183 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 261 (499)
T PLN03234 183 RQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK- 261 (499)
T ss_pred HHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-
Confidence 46789888731 2345556555555444433345667776544 1344456677888888999999998876543221
Q ss_pred CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 79 VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 79 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
..+.|+++.|++...+. ..+..+++++|.+++.++++||+||
T Consensus 262 -~~~~d~l~~l~~~~~~~--~~~~~~~~~~i~~~~~~ll~AG~dT 303 (499)
T PLN03234 262 -QETESFIDLLMQIYKDQ--PFSIKFTHENVKAMILDIVVPGTDT 303 (499)
T ss_pred -CCcccHHHHHHHHhhcc--CcCCCCCHHHHHHHHHHHHhcchhh
Confidence 34579999998754322 1123589999999999999999998
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=99.20 E-value=2e-10 Score=79.51 Aligned_cols=120 Identities=27% Similarity=0.377 Sum_probs=74.5
Q ss_pred Ceeeeccccccc-------chhHHHHHHHHHHHHhc---CCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 044349 1 MRIIAGKRYTSQ-------ESSDFQEQATNIFAFFG---KLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEH 70 (123)
Q Consensus 1 ~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 70 (123)
|+++||.++... ...++...+...+.... ...+.+++|++++++..+..+...+..+.+.+++.++++++
T Consensus 213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 292 (543)
T PLN02971 213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER 292 (543)
T ss_pred HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899887310 11233344444443221 12245677887765222344455556677888889999888
Q ss_pred HHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 71 TMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 71 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
++..+.+......|+++.|++...+. ....+++++|.+++.++++||+||
T Consensus 293 ~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~ls~~~i~~~~~~l~~AG~dT 342 (543)
T PLN02971 293 IKMWREGKRTQIEDFLDIFISIKDEA---GQPLLTADEIKPTIKELVMAAPDN 342 (543)
T ss_pred HHHHhccCCCCCcCHHHHHHhhhccc---CCCCCCHHHHHHhHHHHheeccch
Confidence 76543221123479999999764321 112499999999999999999998
No 4
>PLN02183 ferulate 5-hydroxylase
Probab=99.19 E-value=3.2e-10 Score=78.02 Aligned_cols=122 Identities=21% Similarity=0.403 Sum_probs=79.7
Q ss_pred CeeeecccccccchhHHHHHHHHHHHHhcCCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--
Q 044349 1 MRIIAGKRYTSQESSDFQEQATNIFAFFGKLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSGQ-- 78 (123)
Q Consensus 1 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-- 78 (123)
++++||.+++ ....++.+.+...........+..++||+.++.+.+..++..+..+.+.+++..+++++++....+.
T Consensus 186 ~~~~fG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 264 (516)
T PLN02183 186 YRAAFGSSSN-EGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNAD 264 (516)
T ss_pred HhHhhcCccc-chHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 3567888776 3345577777666554444445577888776522233456667777888888888887765443210
Q ss_pred ---CCCCCCHHHHHhhcccccc-----c--cCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 79 ---VKGDEDFMYVMLSLLDDNA-----E--LLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 79 ---~~~~~d~l~~ll~~~~~~~-----~--~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
.....|+++.+++...+.. . .....+++++|.+++.++++||+||
T Consensus 265 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dT 319 (516)
T PLN02183 265 NDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTET 319 (516)
T ss_pred cccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhh
Confidence 0134689999997543210 0 0122599999999999999999997
No 5
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.12 E-value=1e-09 Score=75.64 Aligned_cols=121 Identities=26% Similarity=0.492 Sum_probs=79.1
Q ss_pred eeeecccccc----cchhHHHHHHHHHHHHhcCCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 044349 2 RIIAGKRYTS----QESSDFQEQATNIFAFFGKLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSG 77 (123)
Q Consensus 2 ~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 77 (123)
.++||.++.. .....+.+.+...+...+...+.+++|++.|+.+.+..++..+....+.+++.++++++++.....
T Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ 266 (517)
T PLN02687 187 RAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG 266 (517)
T ss_pred HHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4578888641 123456666666665444333446788877663233345566677778888899998887654321
Q ss_pred CCCCCCCHHHHHhhcccccc-ccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 78 QVKGDEDFMYVMLSLLDDNA-ELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 78 ~~~~~~d~l~~ll~~~~~~~-~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
+....|+++.++....+.. ...+..++++++.+++.++++||+||
T Consensus 267 -~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eT 312 (517)
T PLN02687 267 -SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDT 312 (517)
T ss_pred -CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCc
Confidence 0235799999997654310 01123599999999999999999998
No 6
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.12 E-value=7.4e-10 Score=76.08 Aligned_cols=117 Identities=30% Similarity=0.505 Sum_probs=77.1
Q ss_pred eeeeccccc-c--cchhHHHHHHHHHHHHhcCCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 044349 2 RIIAGKRYT-S--QESSDFQEQATNIFAFFGKLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSGQ 78 (123)
Q Consensus 2 ~~~fG~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 78 (123)
+++||.++. . ....++...+...+...+...+.+++|++.|+...+..+...+..+.+.+++.++++++++.....
T Consensus 185 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 263 (504)
T PLN00110 185 QVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER- 263 (504)
T ss_pred HHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-
Confidence 467888762 1 133556777766655444333456788877652233445556667777788888888776543321
Q ss_pred CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 79 VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 79 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
....|+++.+++..... .+..++++++.+++.++++||+||
T Consensus 264 -~~~~d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~Ag~dT 304 (504)
T PLN00110 264 -KGNPDFLDVVMANQENS---TGEKLTLTNIKALLLNLFTAGTDT 304 (504)
T ss_pred -ccCCChhhHHhhccccc---CCCCCCHHHHHHHHHhhhcccccc
Confidence 23469999999754321 123599999999999999999998
No 7
>PLN02966 cytochrome P450 83A1
Probab=99.06 E-value=2e-09 Score=73.96 Aligned_cols=118 Identities=20% Similarity=0.331 Sum_probs=70.3
Q ss_pred eeeecccccc-c-chhHHHHHHHHHHHHhcCCcchhhhhhccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 044349 2 RIIAGKRYTS-Q-ESSDFQEQATNIFAFFGKLGASDALPFLRWMD-IGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSGQ 78 (123)
Q Consensus 2 ~~~fG~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 78 (123)
.++||.+++. + ...++.+.+.......+...+..++|++.++. +.+..+..........+++.++++++.......
T Consensus 184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 262 (502)
T PLN02966 184 RQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK- 262 (502)
T ss_pred HHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc-
Confidence 4679998862 1 23345555555444444433456677654331 223223333445556666777776654432211
Q ss_pred CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 79 VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 79 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
.+..|+++.+++..++. ..+..++++++.+++.++++||+||
T Consensus 263 -~~~~~~l~~l~~~~~~~--~~~~~l~~~~i~~~~~~l~~AG~eT 304 (502)
T PLN02966 263 -PETESMIDLLMEIYKEQ--PFASEFTVDNVKAVILDIVVAGTDT 304 (502)
T ss_pred -cccccHHHHHHHHHhcc--CcCCCCCHHHHHHHHHHHHhccccc
Confidence 23468999999765432 1123589999999999999999998
No 8
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.05 E-value=3e-09 Score=73.25 Aligned_cols=119 Identities=34% Similarity=0.484 Sum_probs=76.8
Q ss_pred eeeecccccc--c----chhHHHHHHHHHHHHhcCCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044349 2 RIIAGKRYTS--Q----ESSDFQEQATNIFAFFGKLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRV 75 (123)
Q Consensus 2 ~~~fG~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 75 (123)
+++||.++.. . ...++...+...........+.+++|+++++...+..++..+..+.+.+++.++++++++..+
T Consensus 186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 265 (514)
T PLN03112 186 RMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARS 265 (514)
T ss_pred HHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4678988741 1 123455565555544333334567787776622234456667777888888999888776543
Q ss_pred cCC-CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 76 SGQ-VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 76 ~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
... .....|+++.+++...+. ....+++++|.+++.++++||+||
T Consensus 266 ~~~~~~~~~d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~AG~dT 311 (514)
T PLN03112 266 GKLPGGKDMDFVDVLLSLPGEN---GKEHMDDVEIKALMQDMIAAATDT 311 (514)
T ss_pred ccccCCccchHHHHHHHhhccc---cccCCCHHHHHHHHHHHhcccccc
Confidence 210 123469999999754321 123589999999999999999998
No 9
>PLN02655 ent-kaurene oxidase
Probab=99.03 E-value=3.4e-09 Score=72.20 Aligned_cols=112 Identities=17% Similarity=0.220 Sum_probs=69.3
Q ss_pred eeeecccccc-c-c-h-------hHHHHHHHHHHHHhcCCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 044349 2 RIIAGKRYTS-Q-E-S-------SDFQEQATNIFAFFGKLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHT 71 (123)
Q Consensus 2 ~~~fG~~~~~-~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 71 (123)
.++||.+++. . . . ..+...+...+.......+.+++|+++|++.....+...+....+.+++..++++++
T Consensus 156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 235 (466)
T PLN02655 156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK 235 (466)
T ss_pred HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578887762 1 1 0 112333344443333333456888877763222233344444455677888888777
Q ss_pred HhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 72 MKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 72 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
++...+ ..+.|+++.++... ..+++++|.+++.++++||+||
T Consensus 236 ~~~~~~--~~~~d~l~~ll~~~--------~~ls~~~i~~~~~~~~~ag~dt 277 (466)
T PLN02655 236 KRIARG--EERDCYLDFLLSEA--------THLTDEQLMMLVWEPIIEAADT 277 (466)
T ss_pred HhhcCC--CCcccHHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHH
Confidence 664332 33468999999653 1489999999999999999997
No 10
>PLN02290 cytokinin trans-hydroxylase
Probab=99.00 E-value=4.6e-09 Score=72.35 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=71.7
Q ss_pred eeeecccccccchhHHHHHHHHHHHHhcCCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CC
Q 044349 2 RIIAGKRYTSQESSDFQEQATNIFAFFGKLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSGQ-VK 80 (123)
Q Consensus 2 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~ 80 (123)
+++||.+++. ..++...+...............+|++++++ .+..+........+.+++.++++++++..+.+. +.
T Consensus 213 ~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 289 (516)
T PLN02290 213 RTEFDSSYEK--GKQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSS 289 (516)
T ss_pred HHHcCCcccc--chHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Confidence 4678988762 2233444443333222111112356655552 233455666777888889999988876553321 12
Q ss_pred CCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 81 GDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 81 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
...|+++.++....+.. ..+..++++++.+++.++++||+||
T Consensus 290 ~~~d~l~~ll~~~~~~~-~~~~~l~~~~i~~~~~~~~~AG~dT 331 (516)
T PLN02290 290 YGDDLLGMLLNEMEKKR-SNGFNLNLQLIMDECKTFFFAGHET 331 (516)
T ss_pred CCCCHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHhhhHHH
Confidence 35799999997643221 1123488999999999999999997
No 11
>PLN00168 Cytochrome P450; Provisional
Probab=98.96 E-value=9.4e-09 Score=70.92 Aligned_cols=120 Identities=11% Similarity=0.120 Sum_probs=70.8
Q ss_pred eeeecccccccchhHHHHHHHHHHHHhc-CCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc----
Q 044349 2 RIIAGKRYTSQESSDFQEQATNIFAFFG-KLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVS---- 76 (123)
Q Consensus 2 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---- 76 (123)
.++||.+++......+............ ...+..++|++.+....+..++..+..+.+.+++..+++++++....
T Consensus 192 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 271 (519)
T PLN00168 192 LMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQG 271 (519)
T ss_pred HHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4578988862122233333333322222 22345667765332112223445567778888888888887664311
Q ss_pred CC-C----CCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 77 GQ-V----KGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 77 ~~-~----~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
+. . ....|+++.|++..... ..+..+++++|.+++.++++||+||
T Consensus 272 ~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~lt~~~i~~~~~~l~~AG~dT 321 (519)
T PLN00168 272 GEPPKKETTFEHSYVDTLLDIRLPE--DGDRALTDDEIVNLCSEFLNAGTDT 321 (519)
T ss_pred CccccccccccccHHHHHHhhhccc--cccCCCCHHHHHHHHHHHHHhcchH
Confidence 00 0 01468999999764321 1123599999999999999999997
No 12
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=98.94 E-value=2.5e-09 Score=71.69 Aligned_cols=117 Identities=21% Similarity=0.371 Sum_probs=82.5
Q ss_pred eeeecccccc--c-chhHHHHHHHHHHHHhcCC--cchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 044349 2 RIIAGKRYTS--Q-ESSDFQEQATNIFAFFGKL--GASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVS 76 (123)
Q Consensus 2 ~~~fG~~~~~--~-~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 76 (123)
+++||.+++. + ...++.+.+.......... .+...+||+.++ +....+...+..+.+.+++..+++++++..+.
T Consensus 155 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 233 (463)
T PF00067_consen 155 RVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDD 233 (463)
T ss_dssp HHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred cccccceeeeccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence 4678988762 1 2345667777766544332 245677887776 23445667777788888999999998887765
Q ss_pred CCCCCCCCHHHHHhhcc-ccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 77 GQVKGDEDFMYVMLSLL-DDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 77 ~~~~~~~d~l~~ll~~~-~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
+ .....|+++.++... ..+ .+..+++++|..++.++++||+||
T Consensus 234 ~-~~~~~d~l~~ll~~~~~~~---~~~~ls~~~i~~~~~~~~~ag~dt 277 (463)
T PF00067_consen 234 G-DESRRDLLDSLLQASSDSD---GPSGLSDEEIAAELLTLLFAGHDT 277 (463)
T ss_dssp S-SSSCSSHHHHHHHHHHTTT---TTSSSSHHHHHHHHHHHHHHHHHH
T ss_pred c-ccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 2 135789999999876 221 113699999999999999999986
No 13
>PLN03018 homomethionine N-hydroxylase
Probab=98.87 E-value=4.6e-08 Score=67.85 Aligned_cols=88 Identities=22% Similarity=0.238 Sum_probs=58.5
Q ss_pred chhhhh-hcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CCCCCHHHHHhhccccccccCCCCCCHHHHH
Q 044349 33 ASDALP-FLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSGQV-KGDEDFMYVMLSLLDDNAELLPDRDSDSVIK 110 (123)
Q Consensus 33 ~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~ 110 (123)
+.+.+| |++++...+...+.......+.+++.++++++++..+.... ..+.|+++.|+....+. ....+++++|.
T Consensus 240 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~ls~~~i~ 316 (534)
T PLN03018 240 PVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQN---GKYLVTPDEIK 316 (534)
T ss_pred HHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhccc---CCCCCCHHHHH
Confidence 345566 66543123344455556677888889999888765432100 12469999999764322 11248999999
Q ss_pred HHHHHHHHhhccC
Q 044349 111 ATCLALILAAAET 123 (123)
Q Consensus 111 ~~~~~~~~aG~eT 123 (123)
+++.++++||+||
T Consensus 317 ~~~~~~~~aG~dT 329 (534)
T PLN03018 317 AQCVEFCIAAIDN 329 (534)
T ss_pred HHHHHHHHHhhhH
Confidence 9999999999997
No 14
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.82 E-value=2.9e-08 Score=67.76 Aligned_cols=115 Identities=16% Similarity=0.172 Sum_probs=62.9
Q ss_pred eeeecccccc--cchhHHHHHHHHHHHH-hcCCc----chhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044349 2 RIIAGKRYTS--QESSDFQEQATNIFAF-FGKLG----ASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKR 74 (123)
Q Consensus 2 ~~~fG~~~~~--~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 74 (123)
+++||.+.+. +...++.......... ..... ....+|.+... .+.........+++.+++....+.+
T Consensus 186 ~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~------l~~~~~~~~~~~~~~~~v~~~v~~R 259 (499)
T KOG0158|consen 186 SCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP------LRVKLFPEDVTDFFRKLVNSRVEQR 259 (499)
T ss_pred HhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh------hhcccChHHHHHHHHHHHHHHHHHH
Confidence 5789999873 3344555444444433 11111 12233433221 0111122233344444444444443
Q ss_pred hcCCCCCCCCHHHHHhhcccccc-ccC-CCCCCHHHHHHHHHHHHHhhccC
Q 044349 75 VSGQVKGDEDFMYVMLSLLDDNA-ELL-PDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 75 ~~~~~~~~~d~l~~ll~~~~~~~-~~~-~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
... +..+.||++.+++++.+.. ... ...+|.++|+++|+.+++||+||
T Consensus 260 ~~~-~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeT 309 (499)
T KOG0158|consen 260 EKE-NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFET 309 (499)
T ss_pred Hhc-CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHh
Confidence 221 1457899999999875411 111 12599999999999999999998
No 15
>PTZ00404 cytochrome P450; Provisional
Probab=98.75 E-value=1.1e-07 Score=65.19 Aligned_cols=113 Identities=17% Similarity=0.168 Sum_probs=62.9
Q ss_pred eeeecccccc-cc-----hhHHHHHHHHHHHHhcCCcchhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044349 2 RIIAGKRYTS-QE-----SSDFQEQATNIFAFFGKLGASDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRV 75 (123)
Q Consensus 2 ~~~fG~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 75 (123)
+++||.+++. +. ...+...+...+.......+.+.+|++..+ +..+.....+..+.+.+++.+.++++++..+
T Consensus 180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (482)
T PTZ00404 180 KYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTID 258 (482)
T ss_pred HHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 4678888752 11 134556666655544433233344443322 1111122234455666677777766554332
Q ss_pred cCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 76 SGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 76 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
+ ..+.|+++.|++...+. ......+|.+++.++++||+||
T Consensus 259 ~---~~~~dll~~ll~~~~~~-----~~~~~~~i~~~~~~~~~AG~dT 298 (482)
T PTZ00404 259 P---EVPRDLLDLLIKEYGTN-----TDDDILSILATILDFFLAGVDT 298 (482)
T ss_pred C---CCcccHHHHHHHHhccC-----CcccHHHHHHHHHHHHHhccch
Confidence 2 33579999999764211 1123345889999999999998
No 16
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=98.68 E-value=5.5e-08 Score=66.93 Aligned_cols=113 Identities=18% Similarity=0.185 Sum_probs=72.0
Q ss_pred Ceeeecccc-c-c-cchhHHHHHHHHHHHHhcCCcchhhhh-hcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 044349 1 MRIIAGKRY-T-S-QESSDFQEQATNIFAFFGKLGASDALP-FLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVS 76 (123)
Q Consensus 1 ~~~~fG~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 76 (123)
|.++||... + + ....++...+.........+ ...| +..++...+..++..+..+.+++++.++|+++++....
T Consensus 187 ~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~ 263 (497)
T KOG0157|consen 187 CKTAMGPESLDAEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEK 263 (497)
T ss_pred HHHhcCCccccccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788222 1 1 23445666666554433332 2345 44444211267888999999999999999999987653
Q ss_pred CCC---CCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 77 GQV---KGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 77 ~~~---~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
++. ....|+++.+..... ..+++++|++.+.+|++||+||
T Consensus 264 ~~~~~~~~~~d~L~~~~~~~~-------~~l~~~~i~d~v~tf~faG~DT 306 (497)
T KOG0157|consen 264 EGSGEEKKRLDFLDTLLLEED-------KPLTDEDIRDEVDTFMFAGHDT 306 (497)
T ss_pred cCCcccchhhhHHHHHHHhcc-------CCCCHHHHHHHHHHheeeccch
Confidence 211 224677775222211 2599999999999999999998
No 17
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=98.62 E-value=7e-07 Score=61.61 Aligned_cols=118 Identities=18% Similarity=0.202 Sum_probs=71.3
Q ss_pred Ceeeecccccc-c---chhHHHHHHHHHHHHhcCCcchhhhhhcc-----cccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 044349 1 MRIIAGKRYTS-Q---ESSDFQEQATNIFAFFGKLGASDALPFLR-----WMDIGGNERLMRKTAKEFDIVLQEWLDEHT 71 (123)
Q Consensus 1 ~~~~fG~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 71 (123)
|+++||.+.+. . ...++...+......... ..++|++. ++ ..+..++..+..+.+++++.++|++++
T Consensus 188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~r~ 263 (500)
T PLN02169 188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWI-GIGLERKMRTALATVNRMFAKIISSRR 263 (500)
T ss_pred HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 46889988752 1 123455554443322211 12334322 22 134456777888899999999998887
Q ss_pred Hhhhc-CC-CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 72 MKRVS-GQ-VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 72 ~~~~~-~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
+.... .+ +....|+++.+++...... .....+++++|.+++.++++||+||
T Consensus 264 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~~~~~~~~i~~~~~~~l~AG~dT 316 (500)
T PLN02169 264 KEEISRAETEPYSKDALTYYMNVDTSKY-KLLKPKKDKFIRDVIFSLVLAGRDT 316 (500)
T ss_pred HHhhccccccCCCcCHHHHHHhcccccc-ccccCCChHHHHHHHHHHHHhchhH
Confidence 64221 10 0124799999987642110 1112478999999999999999998
No 18
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=98.53 E-value=8.6e-07 Score=61.31 Aligned_cols=70 Identities=17% Similarity=0.228 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCC---CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 50 RLMRKTAKEFDIVLQEWLDEHTMKRVSGQ---VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
+...+....+.+++.++++++++...... +....|+++.+++...+. +..+++++|.+++.++++||+||
T Consensus 235 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~~~ll~AG~dT 307 (516)
T PLN03195 235 ALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP----DSNFTDKSLRDIVLNFVIAGRDT 307 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCC----CCCCCHHHHHHHHHHHHHHhhHh
Confidence 44455667788888888888776543210 023569999999754321 23599999999999999999998
No 19
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=98.50 E-value=1.3e-06 Score=60.22 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhhcC--CCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 64 QEWLDEHTMKRVSG--QVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 64 ~~~i~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
..+++++++..+.. +.....|+++.|++...++ .++++++..++.++++||+||
T Consensus 253 ~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~------~l~~~~i~~~~~~~~~AG~dT 308 (503)
T PLN02394 253 DYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG------EINEDNVLYIVENINVAAIET 308 (503)
T ss_pred HHHHHHHHHHhhhccCCcchhhhHHHHHHhccccC------CCCHHHHHHHHHHHHHhchhh
Confidence 34566665433210 1123479999999765432 489999999999999999998
No 20
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.46 E-value=1.5e-06 Score=59.29 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=73.3
Q ss_pred Ceeeecccccc---c---chhHHHHHHHHHHHHhcCCcchhhhh-hcccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044349 1 MRIIAGKRYTS---Q---ESSDFQEQATNIFAFFGKLGASDALP-FLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMK 73 (123)
Q Consensus 1 ~~~~fG~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 73 (123)
|.++||.|+.. + +...+++++..++...... .+.| +.+++ .++..++..+.-+.+.+++.+.|++..+.
T Consensus 213 ~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~Id~~l~~ 288 (519)
T KOG0159|consen 213 CLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKYIDNALEE 288 (519)
T ss_pred HHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHhC-CChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778999872 1 2345667777776544332 3334 55666 35556788888899999999999999888
Q ss_pred hhcCCCC--CCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 74 RVSGQVK--GDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 74 ~~~~~~~--~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
.+..+.. +...++..+|.. . .++.+++...+.+|++||.||
T Consensus 289 l~~~~~~~~~~~~~l~~~L~~---~------~l~~k~~~~~~~dll~aGvDT 331 (519)
T KOG0159|consen 289 LEKQDSAGSEYTGSLLELLLR---K------ELSRKDAKANVMDLLAAGVDT 331 (519)
T ss_pred HHhccccccchhHHHHHHHHH---c------cCCHHHHHHHHHHHHHHhccc
Confidence 7653211 223333333322 1 388899999999999999998
No 21
>PLN02500 cytochrome P450 90B1
Probab=98.46 E-value=1.8e-06 Score=59.37 Aligned_cols=65 Identities=20% Similarity=0.178 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 50 RLMRKTAKEFDIVLQEWLDEHTMKRVSGQ-VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
++..+..+.+.+++.++++++++..+.++ ...+.|+++.+++. . .+++++|.+++.++++||+||
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~---~------~ls~~~i~~~~~~ll~AG~dT 294 (490)
T PLN02500 229 RKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH---S------NLSTEQILDLILSLLFAGHET 294 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc---c------CCCHHHHHHHHHHHHHhhhhH
Confidence 34455667788888888888776543221 01346999998853 1 389999999999999999997
No 22
>PLN02936 epsilon-ring hydroxylase
Probab=98.46 E-value=1.7e-06 Score=59.52 Aligned_cols=113 Identities=13% Similarity=0.162 Sum_probs=66.4
Q ss_pred eeeecccccc-cchhHHHHHHHHHHHHhcCCcchhhhhhccc--cc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 044349 2 RIIAGKRYTS-QESSDFQEQATNIFAFFGKLGASDALPFLRW--MD-IGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSG 77 (123)
Q Consensus 2 ~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 77 (123)
.++||.+++. ....++...+...+..... ...+.+|++.+ +. ..+..++..+..+.+.+++.++++++++..+..
T Consensus 168 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~ 246 (489)
T PLN02936 168 LSVFNYNFDSLTTDSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAE 246 (489)
T ss_pred HHHcCCCccccccCcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5679999872 2223445444443332221 12234454321 10 122334566677777888888888776543211
Q ss_pred C---------CCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 78 Q---------VKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 78 ~---------~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
. +....|+++.|+.... .+++++|.+++.++++||+||
T Consensus 247 ~~~~~~~~~~~~~~~d~l~~ll~~~~--------~~~~~~i~~~~~~~~~aG~dT 293 (489)
T PLN02936 247 GEVIEGEEYVNDSDPSVLRFLLASRE--------EVSSVQLRDDLLSMLVAGHET 293 (489)
T ss_pred ccccccccccccCchHHHHHHHhccc--------cCCHHHHHHHHHHHHHHhHHH
Confidence 0 0124679998885421 388999999999999999997
No 23
>PLN02738 carotene beta-ring hydroxylase
Probab=98.44 E-value=1.6e-06 Score=61.41 Aligned_cols=112 Identities=12% Similarity=0.129 Sum_probs=59.9
Q ss_pred eeeecccccc-cchhHHHHHHHHHHHHhcCCcchhhhhh----cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 044349 2 RIIAGKRYTS-QESSDFQEQATNIFAFFGKLGASDALPF----LRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVS 76 (123)
Q Consensus 2 ~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~----l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 76 (123)
.++||.+++. ...+.+...+...+..........++|| +..+ .+..++..+..+.+..++..+++.++.....
T Consensus 282 ~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~ 359 (633)
T PLN02738 282 KAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEE 359 (633)
T ss_pred HHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4679998872 1233444444444332211111111223 2222 2223444445555566666666544332111
Q ss_pred C--------CCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 77 G--------QVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 77 ~--------~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
. ......|+++.|+... ..+++++|.+++.++++||+||
T Consensus 360 ~~~~~~~~~~~~~~~dil~~Ll~~~--------~~ls~~~L~~e~~~ll~AG~eT 406 (633)
T PLN02738 360 EELQFHEEYMNERDPSILHFLLASG--------DDVSSKQLRDDLMTMLIAGHET 406 (633)
T ss_pred hcccchhcccccccchHHHHHHHcC--------CCCCHHHHHHHHHHHHhcCCcc
Confidence 0 0022358999888542 1489999999999999999998
No 24
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=98.42 E-value=3.1e-06 Score=58.07 Aligned_cols=66 Identities=21% Similarity=0.171 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 49 ERLMRKTAKEFDIVLQEWLDEHTMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
.++..+..+.+.+++.++++++++....+. ....|+++.++... ..+++++|.+++.++++||+||
T Consensus 217 ~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~~d~l~~ll~~~--------~~~~~~ei~~~~~~l~~Ag~~t 282 (472)
T PLN02987 217 YRRAIQARTKVAEALTLVVMKRRKEEEEGA-EKKKDMLAALLASD--------DGFSDEEIVDFLVALLVAGYET 282 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccC-cccccHHHHHHhcC--------CCCCHHHHHHHHHHHHHhccch
Confidence 456677888888999999998876543220 23579999999652 1489999999999999999997
No 25
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=98.40 E-value=2e-06 Score=59.42 Aligned_cols=106 Identities=18% Similarity=0.297 Sum_probs=66.6
Q ss_pred eeeecccccc-c---chhHHHHHHHHHHHHhcCCcchhhhhhc----ccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044349 2 RIIAGKRYTS-Q---ESSDFQEQATNIFAFFGKLGASDALPFL----RWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMK 73 (123)
Q Consensus 2 ~~~fG~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~P~l----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 73 (123)
.++||.+++. + ...++...++......... ....+|++ ++++ .+..++..+..+.+.+++.++|+++++.
T Consensus 195 ~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~ 272 (502)
T PLN02426 195 KFSFGLDPGCLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKL 272 (502)
T ss_pred HHHhCCCCcccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5678988862 1 2244666555543322111 11222332 2221 2345667777888889999999887654
Q ss_pred hhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 74 RVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 74 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
.. ....|+++.+++.. .+++++.+++.++++||+||
T Consensus 273 ~~----~~~~dll~~ll~~~----------~~~~~l~~~~~~~l~AG~dT 308 (502)
T PLN02426 273 GF----SASKDLLSRFMASI----------NDDKYLRDIVVSFLLAGRDT 308 (502)
T ss_pred cc----CCcchHHHHHHhcC----------CCHHHHHHHHHHHHHhccch
Confidence 21 23579999998542 25788999999999999998
No 26
>PLN02302 ent-kaurenoic acid oxidase
Probab=98.38 E-value=5.1e-06 Score=57.08 Aligned_cols=69 Identities=22% Similarity=0.228 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 51 LMRKTAKEFDIVLQEWLDEHTMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 51 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
+..+....+.+++.+.++++++....+......|+++.+++...+. +..+++++|..++.++++||+||
T Consensus 234 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~~~~~~~~i~~~~~~~~~Ag~dt 302 (490)
T PLN02302 234 RALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDEN----GRKLDDEEIIDLLLMYLNAGHES 302 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccC----CCCCCHHHHHHHHHHHHHhhHHH
Confidence 3445556777888888888766543221124579999999764322 23589999999999999999997
No 27
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=98.36 E-value=3.5e-06 Score=57.44 Aligned_cols=67 Identities=12% Similarity=0.159 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCC---CCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 50 RLMRKTAKEFDIVLQEWLDEHTMKRVSGQV---KGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
++..+..+.+.+++.+++++++.....+.. ..+.|+++.++.... ..+++++|..++.++++||+||
T Consensus 197 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-------~~l~~~~i~~~~~~ll~Ag~dT 266 (452)
T PLN03141 197 YRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS-------DELTDDLISDNMIDMMIPGEDS 266 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCC-------CCCCHHHHHHHHHHHHHhcchh
Confidence 344456778888889999888765432100 124699999886531 2489999999999999999997
No 28
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.27 E-value=4.5e-06 Score=56.36 Aligned_cols=64 Identities=30% Similarity=0.416 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 49 ERLMRKTAKEFDIVLQEWLDEHTMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
..+..+....+.+++.++|++++ . ....|+++.|+....++ +..+++++|.+++.++++||+||
T Consensus 188 ~~~~~~a~~~~~~~~~~li~~rR----~---~~~~dlls~l~~a~~~~----~~~lsd~Ei~~~~~~ll~AGheT 251 (411)
T COG2124 188 WRRARAARRELDAYLRALIAERR----A---APRDDLLSLLLSAEDDG----GGRLSDDEIRDELITLLVAGHET 251 (411)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----c---CCcccHHHHHHHHhhCC----CCcCCHHHHHHHHHHHHHhhhHH
Confidence 45567788888999999999887 2 45689999999776543 22699999999999999999997
No 29
>PLN02774 brassinosteroid-6-oxidase
Probab=97.91 E-value=8.9e-05 Score=50.85 Aligned_cols=64 Identities=14% Similarity=0.181 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 50 RLMRKTAKEFDIVLQEWLDEHTMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
++..+..+.+.+++.+.++++++.. ..++|+++.++....+ +..+++++|.+++.++++||+||
T Consensus 216 ~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~d~l~~ll~~~~~-----~~~~s~~ei~~~~~~ll~Ag~dT 279 (463)
T PLN02774 216 RSGVQARKNIVRMLRQLIQERRASG-----ETHTDMLGYLMRKEGN-----RYKLTDEEIIDQIITILYSGYET 279 (463)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-----CCcccHHHHHHhCccC-----CCCCCHHHHHHHHHHHHHhcchh
Confidence 4555667778888888888765431 3457999999863221 23589999999999999999997
No 30
>PLN02196 abscisic acid 8'-hydroxylase
Probab=97.46 E-value=0.00081 Score=46.24 Aligned_cols=61 Identities=20% Similarity=0.275 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhhccC
Q 044349 50 RLMRKTAKEFDIVLQEWLDEHTMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALILAAAET 123 (123)
Q Consensus 50 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~aG~eT 123 (123)
++..+....+.+++.+++++++... ....|+++.++.. . ..++++++.+++.++++||+||
T Consensus 219 ~~~~~a~~~~~~~~~~~i~~~~~~~-----~~~~d~l~~ll~~---~-----~~l~~~ei~~~~~~~~~Ag~dT 279 (463)
T PLN02196 219 HKSMKARKELAQILAKILSKRRQNG-----SSHNDLLGSFMGD---K-----EGLTDEQIADNIIGVIFAARDT 279 (463)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcC-----CCcccHHHHHHhc---C-----CCCCHHHHHHHHHHHHHhhhHH
Confidence 4556667777788888887765431 3457899998842 1 2489999999999999999987
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.02 E-value=0.006 Score=41.74 Aligned_cols=78 Identities=14% Similarity=0.208 Sum_probs=54.8
Q ss_pred hhhhhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHH
Q 044349 34 SDALPFLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATC 113 (123)
Q Consensus 34 ~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~ 113 (123)
-..||. ++++. ..++..+.++.+.+.+.+++.++++..+ ...+|++..+++..++ +...+++++....
T Consensus 211 d~~FP~--~LP~~-~~r~~~ra~~~i~k~f~~~i~~rr~s~s----~~~~dmlq~l~~~y~d-----g~~~te~e~a~~l 278 (486)
T KOG0684|consen 211 DFLFPY--NLPIP-LLRRRDRARKKISKIFSKIILDRRASIS----KWDNDMLQSLMEKYKD-----GRPTTEEEIAGLL 278 (486)
T ss_pred Hhhccc--CCCcc-hhhhHHHHHHHHHHHHHHHHHHHHhccc----cccHHHHHHHHHHhhc-----CCcCcHHHHHHHH
Confidence 345674 33222 2344557888888888888888877653 3456899998883332 3569999999999
Q ss_pred HHHHHhhccC
Q 044349 114 LALILAAAET 123 (123)
Q Consensus 114 ~~~~~aG~eT 123 (123)
..++.||.-|
T Consensus 279 i~~LwA~Q~n 288 (486)
T KOG0684|consen 279 IGLLWAGQHN 288 (486)
T ss_pred HHHHHhcccc
Confidence 9999999754
No 32
>COG1610 Uncharacterized conserved protein [Function unknown]
Probab=33.23 E-value=1.1e+02 Score=18.21 Aligned_cols=61 Identities=20% Similarity=0.124 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Q 044349 58 EFDIVLQEWLDEHTMKRVSGQVKGDEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLALIL 118 (123)
Q Consensus 58 ~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 118 (123)
.+..++.+.+++|+.....-...++.|+.+.--....--+.-.|..+++++|...|-..+.
T Consensus 49 ~il~vl~k~iKQRrdS~~~y~~agR~dLa~kE~~Ei~Ii~~ylP~qLsd~e~~~~v~~aIa 109 (148)
T COG1610 49 EILKVLAKEIKQRRDSAEEYEKAGRQDLAAKERAEIAIIEEYLPQQLSEDELRALVDAAIA 109 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhHHHHHHHhCcccCCHHHHHHHHHHHHH
Confidence 3445666667766655331001455666553211100000012345999999888766543
No 33
>PF05949 DUF881: Bacterial protein of unknown function (DUF881); InterPro: IPR010273 This family consists of a series of hypothetical bacterial proteins. One of the family members Q45543 from SWISSPROT from Bacillus subtilis is thought to be involved in cell division and sporulation [].; PDB: 3GMG_B.
Probab=31.36 E-value=60 Score=19.14 Aligned_cols=20 Identities=25% Similarity=0.044 Sum_probs=15.2
Q ss_pred CCCHHHHHHHHHHHHHhhcc
Q 044349 103 RDSDSVIKATCLALILAAAE 122 (123)
Q Consensus 103 ~~~~~~i~~~~~~~~~aG~e 122 (123)
.+++.++...+..+..||.|
T Consensus 40 ~v~~~dl~~lVNeL~~aGAE 59 (149)
T PF05949_consen 40 IVHDQDLLDLVNELWAAGAE 59 (149)
T ss_dssp ---HHHHHHHHHHHHHTT-S
T ss_pred ccCHHHHHHHHHHHhhCCCe
Confidence 48889999999999999987
No 34
>PF14858 DUF4486: Domain of unknown function (DUF4486)
Probab=30.32 E-value=99 Score=22.70 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=16.3
Q ss_pred CCC-HHHHHHHHHHHHHhhcc
Q 044349 103 RDS-DSVIKATCLALILAAAE 122 (123)
Q Consensus 103 ~~~-~~~i~~~~~~~~~aG~e 122 (123)
..+ +.+|.+.+..+|+||.|
T Consensus 332 ~v~dE~Ei~DV~sELF~AG~e 352 (542)
T PF14858_consen 332 PVPDEDEIRDVVSELFFAGME 352 (542)
T ss_pred CCCCchHHHHHHHHHHHhhHH
Confidence 355 45899999999999976
No 35
>PF04688 Phage_holin: Phage lysis protein, holin; InterPro: IPR006479 This entry represents the Bacteriophage SP-beta, BhlB, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=28.63 E-value=73 Score=14.78 Aligned_cols=20 Identities=15% Similarity=0.071 Sum_probs=13.1
Q ss_pred CCCCCHHHHHHHHHHHHHhh
Q 044349 101 PDRDSDSVIKATCLALILAA 120 (123)
Q Consensus 101 ~~~~~~~~i~~~~~~~~~aG 120 (123)
+-++++++|-..+..++..|
T Consensus 4 plpi~e~~i~~~~s~v~t~~ 23 (47)
T PF04688_consen 4 PLPIDEEQINQLISAVFTIV 23 (47)
T ss_pred CCCcCHHHHHHHHHHHHHHH
Confidence 34688888876666665544
No 36
>COG1843 FlgD Flagellar hook capping protein [Cell motility and secretion]
Probab=26.05 E-value=92 Score=19.89 Aligned_cols=32 Identities=9% Similarity=0.225 Sum_probs=18.0
Q ss_pred CCCHHHHHhhccccccccCCCCCCHHHHHHHHHH
Q 044349 82 DEDFMYVMLSLLDDNAELLPDRDSDSVIKATCLA 115 (123)
Q Consensus 82 ~~d~l~~ll~~~~~~~~~~~~~~~~~~i~~~~~~ 115 (123)
..+||..|+...+.+ +|-.++...+++++..-
T Consensus 31 kd~FLkLLiaQLknQ--DPtnPmd~~q~isQmAQ 62 (222)
T COG1843 31 KDDFLKLLIAQLKNQ--DPTNPMDNTEFISQLAQ 62 (222)
T ss_pred HHHHHHHHHHHHhcC--CCCCCCchhHHHHHHHH
Confidence 456777777665544 23334666666655543
No 37
>PF15546 DUF4653: Domain of unknown function (DUF4653)
Probab=24.59 E-value=1.6e+02 Score=18.56 Aligned_cols=34 Identities=18% Similarity=0.364 Sum_probs=18.1
Q ss_pred hcccccccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044349 39 FLRWMDIGGNERLMRKTAKEFDIVLQEWLDEHTMKR 74 (123)
Q Consensus 39 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 74 (123)
.|+|+ .+...++.....++.+.+..|++.+++..
T Consensus 191 Ll~Wi--r~LQ~~~~dQQ~RLQeSFDtILdnRKELi 224 (239)
T PF15546_consen 191 LLRWI--RGLQHQLVDQQNRLQESFDTILDNRKELI 224 (239)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 45565 34334444445555555666666665544
No 38
>PLN02648 allene oxide synthase
Probab=23.56 E-value=79 Score=22.61 Aligned_cols=13 Identities=15% Similarity=-0.192 Sum_probs=10.8
Q ss_pred CCCHHHHHHHHHH
Q 044349 103 RDSDSVIKATCLA 115 (123)
Q Consensus 103 ~~~~~~i~~~~~~ 115 (123)
.++++++.+++..
T Consensus 266 ~l~~~ei~~~~l~ 278 (480)
T PLN02648 266 GISREEALHNLLF 278 (480)
T ss_pred CCCHHHHHHHHHH
Confidence 4999999999863
No 39
>KOG2536 consensus MAM33, mitochondrial matrix glycoprotein [Energy production and conversion]
Probab=22.93 E-value=2.3e+02 Score=18.75 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHHHhcCCcchhhhhhcc-cccccchHHHHHHHHHHHHHHHH
Q 044349 14 SSDFQEQATNIFAFFGKLGASDALPFLR-WMDIGGNERLMRKTAKEFDIVLQ 64 (123)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~l~~~~~~~~~~~~~~~~~~~~~ 64 (123)
++++.+.++.++..-+-. -.+.+||. |+ ..+-.+.+.+|.+.++.|+.
T Consensus 214 De~Lqd~fh~fLEeRGI~--esl~~FL~~ym-~~Kd~rEYl~WlksvK~Fv~ 262 (263)
T KOG2536|consen 214 DEELQDSFHRFLEERGIK--ESLASFLHAYM-KNKDSREYLRWLKSVKSFVE 262 (263)
T ss_pred hHHHHHHHHHHHHHcCCC--HHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhc
Confidence 345556666655443321 13456664 44 24456677777777777653
No 40
>COG4756 Predicted cation transporter [General function prediction only]
Probab=22.71 E-value=75 Score=21.02 Aligned_cols=21 Identities=10% Similarity=0.316 Sum_probs=17.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhc
Q 044349 101 PDRDSDSVIKATCLALILAAA 121 (123)
Q Consensus 101 ~~~~~~~~i~~~~~~~~~aG~ 121 (123)
++.+|++++++.+..++++|.
T Consensus 294 gP~lteeqirsalmsLvIsGG 314 (367)
T COG4756 294 GPELTEEQIRSALMSLVISGG 314 (367)
T ss_pred CcHhhHHHHHHHHHHHHHcCC
Confidence 346999999999999988774
Done!