Your job contains 1 sequence.
>044351
MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYG
KDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERE
SNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVKKR
TPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQS
PHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRARKS
LMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGSEIS
NAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEERTA
FDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVA
EVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKGKRTS
QNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRK
LSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYP
WFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRV
IAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQIS
ADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLA
TDIVSAQQAAYGQLCTVPQIQAREATVRALSEEALLMELKNTNNDILESQNGGESSLKDS
EPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSAL
LQVRQCNTHPESSRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVK
AMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQ
PTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHTPADVAQIIDSAVSSLH
PCCPQNLPIYREIEMCMGRIKTQILALIPTSI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044351
(1172 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2143666 - symbol:ALY1 "ALWAYS EARLY 1" species... 587 5.4e-143 3
TAIR|locus:2089438 - symbol:ALY3 "ALWAYS EARLY 3" species... 740 8.4e-143 2
ZFIN|ZDB-GENE-030131-1747 - symbol:lin9 "lin-9 homolog (C... 201 1.8e-13 2
RGD|1591104 - symbol:Lin9 "lin-9 homolog (C. elegans)" sp... 195 6.9e-13 2
MGI|MGI:1919818 - symbol:Lin9 "lin-9 homolog (C. elegans)... 195 8.2e-13 2
DICTYBASE|DDB_G0286665 - symbol:lin9 "RmlC-like cupin fam... 163 1.6e-12 4
UNIPROTKB|F1MIQ3 - symbol:LOC534587 "Uncharacterized prot... 184 3.9e-12 2
UNIPROTKB|Q5TKA1 - symbol:LIN9 "Protein lin-9 homolog" sp... 185 5.7e-12 3
UNIPROTKB|H0Y322 - symbol:LIN9 "Protein lin-9 homolog" sp... 185 1.2e-11 2
UNIPROTKB|C9J5J4 - symbol:LIN9 "Protein lin-9 homolog" sp... 178 1.9e-11 3
UNIPROTKB|F1PWI7 - symbol:LIN9 "Uncharacterized protein" ... 179 3.1e-11 2
UNIPROTKB|Q5ZMF8 - symbol:LIN9 "Uncharacterized protein" ... 174 3.9e-11 2
WB|WBGene00002998 - symbol:lin-9 species:6239 "Caenorhabd... 148 2.8e-07 4
UNIPROTKB|P30630 - symbol:lin-9 "Protein lin-9" species:6... 148 2.8e-07 4
FB|FBgn0023509 - symbol:mip130 "Myb-interacting protein 1... 144 3.2e-05 5
UNIPROTKB|F1NI68 - symbol:GOLGA4 "Uncharacterized protein... 104 9.4e-05 2
UNIPROTKB|F1NMQ0 - symbol:GOLGA4 "Uncharacterized protein... 104 9.5e-05 2
>TAIR|locus:2143666 [details] [associations]
symbol:ALY1 "ALWAYS EARLY 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 EMBL:AC007478 PROSITE:PS51293 EMBL:AJ583498
EMBL:AB493764 IPI:IPI00524271 RefSeq:NP_198113.2 UniGene:At.30796
ProteinModelPortal:Q6A331 SMR:Q6A331 PRIDE:Q6A331
EnsemblPlants:AT5G27610.1 GeneID:832823 KEGG:ath:AT5G27610
TAIR:At5g27610 eggNOG:NOG148048 HOGENOM:HOG000029798
InParanoid:Q6A331 OMA:ITHERDD PhylomeDB:Q6A331
ProtClustDB:CLSN2681354 Genevestigator:Q6A331 InterPro:IPR010561
Pfam:PF06584 Uniprot:Q6A331
Length = 971
Score = 587 (211.7 bits), Expect = 5.4e-143, Sum P(3) = 5.4e-143
Identities = 142/340 (41%), Positives = 191/340 (56%)
Query: 381 FGDESTALNALQTLADLSLML-PDSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPK 439
+ D+ L AL+TLA++S L P +ESESS +EER ++D KS+ E STSH +
Sbjct: 302 YSDDDDGLGALKTLAEMSASLAPAGLLESESSPHWEEERKTNNVDKKSNTLETVSTSHHR 361
Query: 440 EKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKEQPEPPNXXXXXXXXX 499
EK K G ++ L+ I+ + P KS GN V ++ E++
Sbjct: 362 EKAKQAGLEDNLLHAISAPDKRKP-KSVPESVDGN-VVSIEELR------TSSRKRKPKF 413
Query: 500 XXXXXXXNSEAVTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRV-LEGS 558
E+ D + T ES V + K K +R+SQ A KQ K + +E S
Sbjct: 414 QVLDVVAPKESTQDKSLY-TKESAEV--DSLKTPVKARRSSQGPA--KQLKTAKTTVESS 468
Query: 559 SVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPN 618
S +D+ D V P Q + P + P K +RRK+ LK+ L + K +
Sbjct: 469 SASDKKITGPDAVVPATQVSASGPETLPQKPPNRRKISLKKSLQERAKSLETTHDKPRSF 528
Query: 619 KNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGH 678
K LS+ + L +EKLS CLS +VRRWC +EWFYSAIDYPWF+ EF +YLNHVGLGH
Sbjct: 529 KK-LSEHELL---QEKLSNCLSYPLVRRWCIYEWFYSAIDYPWFAKMEFTDYLNHVGLGH 584
Query: 679 IPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES 718
PRLTRVEW VI+SSLG+PRRLS+RFL DER+KL++YRES
Sbjct: 585 APRLTRVEWSVIKSSLGRPRRLSQRFLQDERDKLQEYRES 624
Score = 571 (206.1 bits), Expect = 5.4e-143, Sum P(3) = 5.4e-143
Identities = 121/217 (55%), Positives = 152/217 (70%)
Query: 1 MAPTRKSRSVNKRYANEVSPAKDV-IXXXXXXXXXXXXXXLGPQWSKGELQRFYEAYRNY 59
MAPTRKS+SVNKR+ NE SP + LGPQW+K EL RFY+AYR Y
Sbjct: 1 MAPTRKSKSVNKRFTNEASPDINFGSASKTKQRKKKLADKLGPQWTKRELVRFYDAYRKY 60
Query: 60 GKDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
DWKKVAA VRN RS EMVE L+ MNRAYLSLPEGTASV GLIAMMTDHY+VMEGS+SE
Sbjct: 61 VGDWKKVAAAVRNNRSVEMVETLFCMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSESE 120
Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVK 178
E +DASE+ RK KRKR +V S +E++ S+A+ GCLS LK+++ + RA
Sbjct: 121 GEDHDASEVTRKHLKRKRPQVLPSDFREEVVPPHSVASVEGCLSFLKQTQAYEKRQRATG 180
Query: 179 KRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDD 215
KRTPRF V+ + ++DD +D+ P NK+ ++ +DA+DD
Sbjct: 181 KRTPRFLVAITHERDDIEDFSPPNKRAKKQ-LDADDD 216
Score = 368 (134.6 bits), Expect = 5.4e-143, Sum P(3) = 5.4e-143
Identities = 85/186 (45%), Positives = 118/186 (63%)
Query: 987 LDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQ 1046
L ++ +QE + EIV S+ A MVDAA+KA SS K ED+ + +AL I + Q
Sbjct: 793 LQHTSDAQEMEPEMIEIVIESKSIAQAMVDAAIKAASSGKNNEDSENMVHQALSSIGEHQ 852
Query: 1047 LTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELI 1106
+ V I+ E NGSL HH+ T +P ++G Q+ S KN+ +PSELI
Sbjct: 853 PLDNSIVPGIKHQEYTNGSLDHHS---LNTAEPM----SNGFISQEGSGKNKTPMPSELI 905
Query: 1107 TSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQIL 1165
TSCVA+ LM+Q +++ + PADVAQ++D+ V+ L P CPQN+PIYREI+ CMG IKTQI+
Sbjct: 906 TSCVASWLMMQMISKKQYPPADVAQLMDTVVNDLQPRCPQNMPIYREIQTCMGLIKTQIM 965
Query: 1166 ALIPTS 1171
AL+ TS
Sbjct: 966 ALVRTS 971
Score = 285 (105.4 bits), Expect = 3.0e-134, Sum P(3) = 3.0e-134
Identities = 80/206 (38%), Positives = 112/206 (54%)
Query: 718 SRVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRR 777
+RVIAIHPKTRE+ DG +LT+DH+KC V FD ELGVE VMDID MP NPL+ MPE LRR
Sbjct: 652 NRVIAIHPKTREIRDGKILTVDHNKCNVLFD--ELGVELVMDIDCMPLNPLEYMPEGLRR 709
Query: 778 QISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAK 837
QI DK AI KE ++N HP+ + +LF S LE N + + D+ + K
Sbjct: 710 QI--DKCLAICKEARLNRHPSSDASVLF-SPSVLENVNFSMNPPPAK-QDDIREPVLYGK 765
Query: 838 SLATDIVSAQQAAYGQLCTVPQIQ---AREATVRALSEEALLMEL----KNTNNDILESQ 890
+AT+ Q T +IQ A + T A E ++E+ K+ ++++
Sbjct: 766 VIATNTTD-QSIVINSKVTGTEIQRTLALQHTSDAQEMEPEMIEIVIESKSIAQAMVDAA 824
Query: 891 NGGESSLKDSEPLKKHIATVLVQLKE 916
SS K++E + + L + E
Sbjct: 825 IKAASSGKNNEDSENMVHQALSSIGE 850
Score = 82 (33.9 bits), Expect = 1.3e-89, Sum P(3) = 1.3e-89
Identities = 65/274 (23%), Positives = 113/274 (41%)
Query: 227 EASQRGGSPQVSQSPHKKTEHGKSSPVQIWD-KMFPPAETAHPDAREALNEEGCPEARIL 285
+AS+RGG SP+++ E + +P ++ A+ HPD+ ++ E G +
Sbjct: 216 DASRRGGG-----SPYRRKELSEITPTRLRKTSQAQEAQFKHPDS--SMFENG-----VR 263
Query: 286 NRRPENGAYTRARKSLMDMEGVGTVEVHRXXXXXXXXXXXVEEVRNSLSDDE-GEACSGT 344
+R + GA R LMDMEG+ T + VEE + SDD+ G T
Sbjct: 264 DRWHKKGAADRDGALLMDMEGLVTQK---------EKIVRVEEAEGNYSDDDDGLGALKT 314
Query: 345 EEGLSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDS 404
+S+ G + + + H + + K E+ + + + A + L D+
Sbjct: 315 LAEMSASLAPAGL-LESESSPHWEEERKTNNVDKKSNTLETVSTSHHREKAKQA-GLEDN 372
Query: 405 TMESESSVQLKEERTAFD-IDDKSSAPEETSTSHPKEKIKH-----LGPKE----KALNT 454
+ + S+ ++ ++ + +D + EE TS K K K + PKE K+L T
Sbjct: 373 LLHAISAPDKRKPKSVPESVDGNVVSIEELRTSSRKRKPKFQVLDVVAPKESTQDKSLYT 432
Query: 455 ITEAE-DIIPRKSKLGRYSGNDVETVAEVKEQPE 487
AE D + K R S + + K E
Sbjct: 433 KESAEVDSLKTPVKARRSSQGPAKQLKTAKTTVE 466
Score = 39 (18.8 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 12/86 (13%), Positives = 32/86 (37%)
Query: 402 PDSTMESESSVQLKEERTAFDIDDKSSAPEE----TSTSHPKEKIKHLGPKEKALNTITE 457
P S E + ++ A++ +++ + +H ++ I+ P K +
Sbjct: 153 PHSVASVEGCLSFLKQTQAYEKRQRATGKRTPRFLVAITHERDDIEDFSPPNKRAKKQLD 212
Query: 458 AEDIIPRKSKLGRYSGNDVETVAEVK 483
A+D R+ Y ++ + +
Sbjct: 213 ADDDASRRGGGSPYRRKELSEITPTR 238
>TAIR|locus:2089438 [details] [associations]
symbol:ALY3 "ALWAYS EARLY 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293 eggNOG:NOG148048
HOGENOM:HOG000029798 InterPro:IPR010561 Pfam:PF06584 EMBL:AJ583497
EMBL:AP001305 EMBL:BT011578 EMBL:BT012245 EMBL:AK230069
IPI:IPI00846542 RefSeq:NP_001078197.2 UniGene:At.8305
ProteinModelPortal:Q6A332 SMR:Q6A332 IntAct:Q6A332 STRING:Q6A332
PaxDb:Q6A332 PRIDE:Q6A332 EnsemblPlants:AT3G21430.2 GeneID:821697
KEGG:ath:AT3G21430 TAIR:At3g21430 OMA:IQKCTER PhylomeDB:Q6A332
ProtClustDB:CLSN2925526 Genevestigator:Q6A332 Uniprot:Q6A332
Length = 1132
Score = 740 (265.6 bits), Expect = 8.4e-143, Sum P(2) = 8.4e-143
Identities = 187/447 (41%), Positives = 249/447 (55%)
Query: 1 MAPTR--KSRSVNKRYANEVSPAKDVIXXXXXXXXXXXXXX-LGPQWSKGELQRFYEAYR 57
MAP+R KS+ K A VSP KD LGPQWSK EL+RFYE YR
Sbjct: 1 MAPSRSKKSKYKKKPRAKAVSPHKDEESMSKTKQRKRKLSDMLGPQWSKEELERFYEGYR 60
Query: 58 NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEG-SD 116
+GK+WKKVA V +RSAEMVEALY MN+AYLSLPEGTASVVGL AMMTDHY+V+ G SD
Sbjct: 61 KFGKEWKKVAGFVHSRSAEMVEALYTMNKAYLSLPEGTASVVGLTAMMTDHYSVLHGGSD 120
Query: 117 SERESNDASEMPRKSQKRKRAKVQ--LSASKEDISQSWSMAATGGCLSLLKRSRIDGNQP 174
SE+E+N+ E PR + KR R K S E +S ++ G + LK+ R + P
Sbjct: 121 SEQENNEGIETPRSAPKRSRVKSSDHPSIGLEGLSDRLQFRSSSGFMPSLKKRRTE-TMP 179
Query: 175 RAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGS 234
RAV KRTPR P+SY+ +KD R+ Y+ K+ D DD++ H ALAL EASQRGGS
Sbjct: 180 RAVGKRTPRIPISYTLEKDTRERYLSPVKRGLNQKGDDTDDDMEHEIALALAEASQRGGS 239
Query: 235 PQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAY 294
+ S +P++K + P + ++M + A E+ E + + +N Y
Sbjct: 240 TKNSHTPNRKAK--MYPPDKKGERMRADIDLAIAKLHATDMEDVRCEPSLGSTEADNADY 297
Query: 295 TRARKSLMDMEGVGTVEVHRXXXXXXXXXXXVEEVRNSLSDDEGEACSGTEEG--LSSRK 352
+ R L EG VE + ++E +D EACSGT+E L +
Sbjct: 298 SGGRNDLTHGEGSSAVEKQQKGRTYYRRRVGIKE------EDAKEACSGTDEAPSLGAPD 351
Query: 353 GKVGSEISNAKNDHLPLQMQRKRSKK-LFFGDESTALNALQTLADLSLMLPDSTMESESS 411
K E K ++ R++SKK LF DE TA +AL TLADLSLM+P++ ++ESS
Sbjct: 352 EKFEQE-REGKALKFTYKVSRRKSKKSLFTADEDTACDALHTLADLSLMMPETATDTESS 410
Query: 412 VQLKEERT--AFDIDDKSSAPEETSTS 436
VQ +E++ A+ D K + P S S
Sbjct: 411 VQAEEKKAGEAYVSDFKGTDPASMSKS 437
Score = 728 (261.3 bits), Expect = 8.4e-143, Sum P(2) = 8.4e-143
Identities = 228/666 (34%), Positives = 338/666 (50%)
Query: 528 EHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPT 587
E K +GKR S + S + K + + +S + N D AP+ A + + PT
Sbjct: 506 EEYKPVGRGKR-SASIRNSHEKKSAKSHDHTS-SSNNIVEEDESAPSN-AVIKKQVNLPT 562
Query: 588 KHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRW 647
K +SRRK+ ++ L+ + K SE EK S C+SS RRW
Sbjct: 563 KVRSRRKIVTEKPLTIDDGKISETI--------------------EKFSHCISSFRARRW 602
Query: 648 CTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHD 707
C FEWFYSAIDYPWF+ +EFVEYL+HVGLGH+PRLTRVEWGVIRSSLGKPRR S++FL +
Sbjct: 603 CIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKE 662
Query: 708 EREKLKQYRESRVIAIHPKTRELHDGSVLTIDHD---KCRVQFDRP---ELGVEFVMDID 761
E+EKL YR+S + +G + + RV P E+ V+ +D
Sbjct: 663 EKEKLYLYRDSVRKHYDELNTGMREGLPMDLARPLNVSQRVICLHPKSREIHDGNVLTVD 722
Query: 762 SMPSN-PLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNT 820
DN PE L + D L+ N + F S+ H++ PI
Sbjct: 723 HCRYRIQFDN-PE-LGVEFVKDTECMPLNPLE-NMPASLARHYAF-SNYHIQN-PI-EEK 776
Query: 821 LQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALS--EEALLME 878
+ ++AK M P+ ++S+ ++ + +A +EAL ++
Sbjct: 777 MHERAKESMLEGYPKLSCETGHLLSSPNYNISNSLKQEKVDISSSNPQAQDGVDEALALQ 836
Query: 879 LKNTNNDILESQNGGESSLKDSEPLKKHI---ATVLVQLKEANDQACGFRE----LCFGI 931
L N+ + E+ ++ L + + VL +LK ND+ ++
Sbjct: 837 LFNSQPSSIGQIQAREADVQALSELTRALDKKELVLRELKCMNDEVVESQKDGHNNALKD 896
Query: 932 SCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTH----PESS--RPSWPMHPANVK 985
S Q+ + ++ S I+ Q S ALL +RQ NT+ P SS R S P
Sbjct: 897 SESFKKQYAAVLFQLSEIN---EQVSLALLGLRQRNTYQENVPYSSIRRMSKSGEPDGQL 953
Query: 986 MLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKR 1045
++++ S +G V+EIV SR+KA MV AV+A+ +++ E+ + EA+D ++
Sbjct: 954 TYEDNNASDTNGFHVSEIVESSRIKARKMVYRAVQALELLRKDENNNVNMEEAIDFVNN- 1012
Query: 1046 QLTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSEL 1105
QL+ D S +Q G G S T +P + A+ + L D+N+ Q+PS+L
Sbjct: 1013 QLSIDQTEG--SSVQQTQG--GQDQRLPS-TPNPPSSTPANDSHLNQ-PDQNDLQVPSDL 1066
Query: 1106 ITSCVATLLMIQTCTERH-TPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQI 1164
++ C+ATLLMIQ CTER P++VAQ++DSAV+SL PCC QNLPIY EI+ CMG I+ QI
Sbjct: 1067 VSRCIATLLMIQKCTERQFPPSEVAQVLDSAVASLQPCCSQNLPIYTEIQKCMGIIRNQI 1126
Query: 1165 LALIPT 1170
LAL+P+
Sbjct: 1127 LALVPS 1132
Score = 89 (36.4 bits), Expect = 7.2e-74, Sum P(2) = 7.2e-74
Identities = 65/298 (21%), Positives = 114/298 (38%)
Query: 330 RNSLSDDEGE-ACSGTEEGLSSRKGKVGSEISNAKN-----DHLPLQ-------MQRKRS 376
RN L+ EG A ++G + + +VG + +AK D P Q +
Sbjct: 301 RNDLTHGEGSSAVEKQQKGRTYYRRRVGIKEEDAKEACSGTDEAPSLGAPDEKFEQEREG 360
Query: 377 KKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEETSTS 436
K L F + + + ++L + + + + L TA D + A E+ +
Sbjct: 361 KALKFTYKVSRRKSKKSLFTADEDTACDALHTLADLSLMMPETATDTESSVQAEEKKAGE 420
Query: 437 HPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKEQPEPP--NXXXX 494
K P +++++ + R SK RY ND+ ++ P
Sbjct: 421 AYVSDFKGTDPA-----SMSKSSSL--RNSKQRRYGSNDLCNPELERKSPSSSLIQKRRQ 473
Query: 495 XXXXXXXXXXXXNSEAVTDTHMTRTLESEAVAEEHNKFASKGKRTS--QNSAQSKQWKPG 552
E + + S+ + EE+ K +GKR++ +NS + K K
Sbjct: 474 KALPAKVRENVLKDELAASSQVIEPCNSKGIGEEY-KPVGRGKRSASIRNSHEKKSAKSH 532
Query: 553 RVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSE 610
SS N N D AP+ A + + PTK +SRRK+ ++ L+ + K SE
Sbjct: 533 D--HTSSSN--NIVEEDESAPSN-AVIKKQVNLPTKVRSRRKIVTEKPLTIDDGKISE 585
Score = 48 (22.0 bits), Expect = 1.5e-69, Sum P(2) = 1.5e-69
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 118 ERESNDASEMPRKSQKRKRAKVQLSASKEDISQS 151
ER+S +S + ++ QK AKV+ + K++++ S
Sbjct: 459 ERKSPSSSLIQKRRQKALPAKVRENVLKDELAAS 492
>ZFIN|ZDB-GENE-030131-1747 [details] [associations]
symbol:lin9 "lin-9 homolog (C. elegans)"
species:7955 "Danio rerio" [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
ZFIN:ZDB-GENE-030131-1747 GO:GO:0005634 GO:GO:0051726
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 EMBL:BX470188 IPI:IPI00483095
RefSeq:NP_001038411.1 UniGene:Dr.76676 Ensembl:ENSDART00000045185
GeneID:560867 KEGG:dre:560867 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 InParanoid:Q5RHQ8 OMA:NEPNETM OrthoDB:EOG4R502K
NextBio:20883652 ArrayExpress:Q5RHQ8 Bgee:Q5RHQ8 Uniprot:Q5RHQ8
Length = 543
Score = 201 (75.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 58/173 (33%), Positives = 90/173 (52%)
Query: 556 EGSSVNDQN-RASIDLVAPT-GQAPVASPASSPTKHQSRRKM---DLKRKLSSKEMKFSE 610
EGS N N + ++ T G++ S +PT+ R ++ D +R ++S+ + S+
Sbjct: 22 EGSLSNTLNEKNNLPKSQTTRGRSSYVS-METPTRSSKRSRLSCEDEERPIASRSPRRSQ 80
Query: 611 NSLKTQPNK-NSLSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-NRE 666
+ T P K +++ D+ +S K +L L +WC +EWFYS ID P F + +
Sbjct: 81 R-VTTMPQKLTNVATPDKRVSQKIGLRLRNLLKLPKAHKWCIYEWFYSNIDRPLFEGDND 139
Query: 667 FVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
F L ++ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 140 FCLCLKE-SFPNLKTRKLTRVEWGTIRRLMGKPRRCSSAFFAEERMALKQKRQ 191
Score = 60 (26.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 726 KTRELHDG----SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
+ R +HDG + +D RV FDR LG V D + + + P + MP
Sbjct: 227 RLRGVHDGLFTGQIDAVDTSAATYRVTFDRNGLGTHTVPDYEVLSNEPHETMP 279
>RGD|1591104 [details] [associations]
symbol:Lin9 "lin-9 homolog (C. elegans)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] REFSEQ:XM_003752692 Ncbi:XP_003752740
Length = 552
Score = 195 (73.7 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 57/173 (32%), Positives = 85/173 (49%)
Query: 556 EGSSVNDQNRASIDLV-APTGQAPVASPA-SSPTKHQSRRKM---DLKRKLSSKEMKFSE 610
EGS N N L P + A PA P ++ R ++ + R++++K K ++
Sbjct: 32 EGSLSNTWNEKYSSLQKTPVWKGRNAGPAVEMPFRNSKRSRLFSDEDDRQINTKSPKRNQ 91
Query: 611 N-SLKTQPNKNSLSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-NRE 666
++ Q ++S D+ S K +L L +WC +EWFYS ID P F + +
Sbjct: 92 RVAMIPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDND 151
Query: 667 FVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
F L ++ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 152 FCVCLKE-SFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 203
Score = 61 (26.5 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
+ R +HDG + +D + RV FDR LG + D + + + P + MP A
Sbjct: 239 RLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 293
>MGI|MGI:1919818 [details] [associations]
symbol:Lin9 "lin-9 homolog (C. elegans)" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
MGI:MGI:1919818 GO:GO:0005654 GO:GO:0006260 GO:GO:0007049
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 OMA:NEPNETM OrthoDB:EOG4R502K EMBL:AK042357
EMBL:AK052618 EMBL:AF190325 IPI:IPI00226441 IPI:IPI00515433
IPI:IPI00788457 RefSeq:NP_001096652.1 RefSeq:NP_780395.2
UniGene:Mm.275044 STRING:Q8C735 PhosphoSite:Q8C735 PaxDb:Q8C735
PRIDE:Q8C735 Ensembl:ENSMUST00000085803 Ensembl:ENSMUST00000085804
GeneID:72568 KEGG:mmu:72568 UCSC:uc007dwk.2 UCSC:uc007dwm.2
InParanoid:Q8C735 NextBio:336515 Bgee:Q8C735 CleanEx:MM_LIN9
Genevestigator:Q8C735 GermOnline:ENSMUSG00000058729 Uniprot:Q8C735
Length = 542
Score = 195 (73.7 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 57/173 (32%), Positives = 85/173 (49%)
Query: 556 EGSSVNDQNRASIDLV-APTGQAPVASPA-SSPTKHQSRRKM---DLKRKLSSKEMKFSE 610
EGS N N L P + A PA P ++ R ++ + R++++K K ++
Sbjct: 22 EGSLSNTWNEKYSSLQKTPVWKGRNAGPAVEMPFRNSKRSRLFSDEDDRQINTKSPKRNQ 81
Query: 611 N-SLKTQPNKNSLSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-NRE 666
++ Q ++S D+ S K +L L +WC +EWFYS ID P F + +
Sbjct: 82 RVAMIPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDND 141
Query: 667 FVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
F L ++ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 142 FCVCLKE-SFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 193
Score = 60 (26.2 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
+ R +HDG + +D + RV FDR LG + D + + + P + MP
Sbjct: 229 RLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMP 281
>DICTYBASE|DDB_G0286665 [details] [associations]
symbol:lin9 "RmlC-like cupin family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0286665 GenomeReviews:CM000153_GR EMBL:AAFI02000089
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584 RefSeq:XP_637607.1
EnsemblProtists:DDB0232078 GeneID:8625747 KEGG:ddi:DDB_G0286665
InParanoid:Q54LF4 OMA:EVMSADK Uniprot:Q54LF4
Length = 999
Score = 163 (62.4 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 561 NDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDL--KRKLSSKEMKFSENSLKTQPN 618
N+ +I+ Q + PT +++ + L +++ S K N L Q
Sbjct: 483 NNSTDGNINYTQQQQQQQQQQQQNHPTLNENDKNDILLPSKEVQSVIQKKLVNFLSKQKQ 542
Query: 619 KNSLSQEDRLLSMKEKLSGCLSSNMVR---RWCTFEWFYSAIDYPWFSNREFVEYLNHVG 675
S S+ ++ S S + N + +W +EWFYS +D P++ EF ++
Sbjct: 543 TKSNSK-NKTTSSSSSSSSSSNENKLSNPGKWAYYEWFYSDLDTPFYFYNEFQLLIHQFP 601
Query: 676 LGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES 718
+ +LT+ EW IRS + KPRRLSK+F + R KL RE+
Sbjct: 602 ISK--KLTKTEWNSIRSKMRKPRRLSKQFYDEARSKLYHTRET 642
Score = 81 (33.6 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 4 TRKSRSVNKRYANEVSPAKDVIXXXXXXXXXXXXXXLGPQWSKGELQRFYEAY-RNYGKD 62
T K R N++ EV + LGP+W E+ Y +N +
Sbjct: 5 TPKKRG-NQQNIGEVEIGDGINNNNSLGEDSTIHPQLGPEWDIKEITDLYNIIIKNEKPE 63
Query: 63 WKKVAAQVRNRSAEMVEALYNMN---RAYLSLPEGTASVV-GLIA 103
W+ + + NR+ EM+E +Y ++ + L PE S + G+ A
Sbjct: 64 WRSILKKFPNRTEEMLEYIYKLSCTTKFILDSPEHFFSFIQGVYA 108
Score = 69 (29.3 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1092 DVSDKNEAQIPSELITSCVATLLMIQT-CTE-RHTPADVAQIIDSAVSSLHPCCP--QNL 1147
D SD+N+A ELI C+ + I+ C + D+ + ++ ++ + P +NL
Sbjct: 919 DQSDENQAL--RELIIGCIGFIFQIKNQCVNIEFSSEDLDFLFETCLNQIKPKSDSTENL 976
Query: 1148 PIYREIEMCMGRIKTQIL 1165
++ EIE + IK +I+
Sbjct: 977 VLFNEIERDVETIKKRIV 994
Score = 40 (19.1 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 1040 DHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSD 1095
DH+ Q+ D RV + NG + +N TNN +L DV D
Sbjct: 651 DHLKFLQIEPDSRVLYLYENSLENGKVISYNKISKTYSILSDTNN----QLIDVPD 702
>UNIPROTKB|F1MIQ3 [details] [associations]
symbol:LOC534587 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR010561 Pfam:PF06584 GeneTree:ENSGT00390000003188
OMA:NEPNETM EMBL:DAAA02042671 IPI:IPI00841368
Ensembl:ENSBTAT00000047257 Uniprot:F1MIQ3
Length = 541
Score = 184 (69.8 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 54/173 (31%), Positives = 83/173 (47%)
Query: 556 EGSSVNDQNRASIDLV-APTGQAP-VASPASSPTKHQSRRKM---DLKRKLSSKEMKFSE 610
EGS N N L P + S P ++ R ++ + R+++++ K ++
Sbjct: 22 EGSLSNTWNEKYSSLQKTPVWKGRNTGSAVEMPFRNSKRSRLFSDEDDRQINTRSPKRNQ 81
Query: 611 N-SLKTQPNKNSLSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-NRE 666
++ Q ++S D+ S K +L L +WC +EWFYS ID P F + +
Sbjct: 82 RVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDND 141
Query: 667 FVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
F L ++ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 142 FCVCLKE-SFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 193
Score = 65 (27.9 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQI 779
+ R +HDG + +D + RV FDR LG + D + + + P + MP A Q
Sbjct: 229 RLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIAAFGQQ 288
Query: 780 SADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAP 815
+F L P SP + +D L ++P
Sbjct: 289 RPSRFFMTPPRLHYT--PPLQSP-IHDNDPLLGQSP 321
>UNIPROTKB|Q5TKA1 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_115566 GO:GO:0005654
GO:GO:0006260 eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GO:GO:0000278 CTD:286826 HOGENOM:HOG000007517 HOVERGEN:HBG057743
OrthoDB:EOG4R502K EMBL:AY786184 EMBL:AF190323 EMBL:AF190324
EMBL:AK126177 EMBL:BX537869 EMBL:BC043444 EMBL:BC045625
IPI:IPI00445335 IPI:IPI00844013 IPI:IPI01012571
RefSeq:NP_001257338.1 RefSeq:NP_001257339.1 RefSeq:NP_775106.2
UniGene:Hs.120817 IntAct:Q5TKA1 MINT:MINT-4054198 STRING:Q5TKA1
PhosphoSite:Q5TKA1 DMDM:74708186 PaxDb:Q5TKA1 PRIDE:Q5TKA1
Ensembl:ENST00000328205 Ensembl:ENST00000366801 GeneID:286826
KEGG:hsa:286826 UCSC:uc001hqa.2 UCSC:uc001hqb.2 UCSC:uc001hqc.3
GeneCards:GC01M226420 HGNC:HGNC:30830 HPA:HPA030241 MIM:609375
neXtProt:NX_Q5TKA1 PharmGKB:PA134970771 InParanoid:Q5TKA1
GenomeRNAi:286826 NextBio:96300 ArrayExpress:Q5TKA1 Bgee:Q5TKA1
CleanEx:HS_LIN9 Genevestigator:Q5TKA1 GermOnline:ENSG00000183814
Uniprot:Q5TKA1
Length = 542
Score = 185 (70.2 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 55/173 (31%), Positives = 84/173 (48%)
Query: 556 EGSSVNDQNRASIDLV-APTGQAPVASPA-SSPTKHQSRRKM---DLKRKLSSKEMKFSE 610
EGS N N L P + S A P ++ R ++ + R+++++ K ++
Sbjct: 22 EGSLSNTWNEKYSSLQKTPVWKGRNTSSAVEMPFRNSKRSRLFSDEDDRQINTRSPKRNQ 81
Query: 611 N-SLKTQPNKNSLSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-NRE 666
++ Q ++S D+ S K +L L +WC +EWFYS ID P F + +
Sbjct: 82 RVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDND 141
Query: 667 FVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
F L ++ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 142 FCVCLKE-SFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 193
Score = 61 (26.5 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP-EALRRQ 778
+ R +HDG + +D + RV FDR LG + D + + + P + MP A ++
Sbjct: 229 RLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQK 288
Query: 779 ISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAP 815
+F L P SP++ +D L ++P
Sbjct: 289 QRPSRFFMTPPRLHYT--PPLQSPII-DNDPLLGQSP 322
Score = 45 (20.9 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 394 LADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEET 433
+A+L LPD + +++ V LKE + ++K S+ ++T
Sbjct: 1 MAELD-QLPDESSSAKALVSLKEGSLSNTWNEKYSSLQKT 39
>UNIPROTKB|H0Y322 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 InterPro:IPR010561
Pfam:PF06584 OMA:NEPNETM HGNC:HGNC:30830 EMBL:AL359742
EMBL:BX284931 ProteinModelPortal:H0Y322 Ensembl:ENST00000366808
Bgee:H0Y322 Uniprot:H0Y322
Length = 613
Score = 185 (70.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 55/173 (31%), Positives = 84/173 (48%)
Query: 556 EGSSVNDQNRASIDLV-APTGQAPVASPA-SSPTKHQSRRKM---DLKRKLSSKEMKFSE 610
EGS N N L P + S A P ++ R ++ + R+++++ K ++
Sbjct: 93 EGSLSNTWNEKYSSLQKTPVWKGRNTSSAVEMPFRNSKRSRLFSDEDDRQINTRSPKRNQ 152
Query: 611 N-SLKTQPNKNSLSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-NRE 666
++ Q ++S D+ S K +L L +WC +EWFYS ID P F + +
Sbjct: 153 RVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDND 212
Query: 667 FVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
F L ++ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 213 FCVCLKE-SFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 264
Score = 61 (26.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP-EALRRQ 778
+ R +HDG + +D + RV FDR LG + D + + + P + MP A ++
Sbjct: 300 RLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQK 359
Query: 779 ISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAP 815
+F L P SP++ +D L ++P
Sbjct: 360 QRPSRFFMTPPRLHYT--PPLQSPII-DNDPLLGQSP 393
>UNIPROTKB|C9J5J4 [details] [associations]
symbol:LIN9 "Protein lin-9 homolog" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] GO:GO:0005634 InterPro:IPR010561
Pfam:PF06584 HOGENOM:HOG000007517 HGNC:HGNC:30830 EMBL:AL359742
EMBL:BX284931 IPI:IPI00946841 ProteinModelPortal:C9J5J4
STRING:C9J5J4 Ensembl:ENST00000481685 UCSC:uc009xel.1
ArrayExpress:C9J5J4 Bgee:C9J5J4 Uniprot:C9J5J4
Length = 489
Score = 178 (67.7 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 47/119 (39%), Positives = 66/119 (55%)
Query: 602 SSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPW 661
S+ EMKF+ ++ T P+K + SQ+ + +L L +WC +EWFYS ID P
Sbjct: 65 SAVEMKFTA-TMST-PDKKA-SQK-----IGFRLRNLLKLPKAHKWCIYEWFYSNIDKPL 116
Query: 662 FS-NREFVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
F + +F L ++ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 117 FEGDNDFCVCLKE-SFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 174
Score = 61 (26.5 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP-EALRRQ 778
+ R +HDG + +D + RV FDR LG + D + + + P + MP A ++
Sbjct: 210 RLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQK 269
Query: 779 ISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAP 815
+F L P SP++ +D L ++P
Sbjct: 270 QRPSRFFMTPPRLHYT--PPLQSPII-DNDPLLGQSP 303
Score = 45 (20.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 394 LADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEET 433
+A+L LPD + +++ V LKE + ++K S+ ++T
Sbjct: 17 MAELD-QLPDESSSAKALVSLKEGSLSNTWNEKYSSLQKT 55
Score = 39 (18.8 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 414 LKEERTAFDIDDKSSAPEETSTSHPKEKIK 443
LK+ R +F + + P+E+S++ +K
Sbjct: 8 LKKRRGSFKMAELDQLPDESSSAKALVSLK 37
>UNIPROTKB|F1PWI7 [details] [associations]
symbol:LIN9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR010561 Pfam:PF06584 GeneTree:ENSGT00390000003188
EMBL:AAEX03005273 EMBL:AAEX03005274 Ensembl:ENSCAFT00000038412
Uniprot:F1PWI7
Length = 490
Score = 179 (68.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 44/125 (35%), Positives = 67/125 (53%)
Query: 599 RKLSSKEMKFSEN-SLKTQPNKNSLSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYS 655
R+++++ K ++ ++ Q ++S D+ S K +L L +WC +EWFYS
Sbjct: 18 RQINTRSPKRNQRVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYS 77
Query: 656 AIDYPWFS-NREFVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKL 712
ID P F + +F L ++ +LTRVEWG IR +GKPRR S F +ER L
Sbjct: 78 NIDKPLFEGDNDFCVCLKE-SFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSAL 136
Query: 713 KQYRE 717
KQ R+
Sbjct: 137 KQKRQ 141
Score = 60 (26.2 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
+ R +HDG + +D + RV FDR LG + D + + + P + MP A
Sbjct: 177 RLRGVHDGLFTGQIDAVDTFNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 231
>UNIPROTKB|Q5ZMF8 [details] [associations]
symbol:LIN9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
eggNOG:NOG148048 InterPro:IPR010561 Pfam:PF06584
GeneTree:ENSGT00390000003188 CTD:286826 HOGENOM:HOG000007517
HOVERGEN:HBG057743 OMA:NEPNETM OrthoDB:EOG4R502K EMBL:AADN02012179
EMBL:AJ719426 IPI:IPI00651557 RefSeq:NP_001026213.1
UniGene:Gga.20720 STRING:Q5ZMF8 Ensembl:ENSGALT00000015028
GeneID:421316 KEGG:gga:421316 InParanoid:Q5ZMF8 NextBio:20824100
Uniprot:Q5ZMF8
Length = 450
Score = 174 (66.3 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 41/101 (40%), Positives = 54/101 (53%)
Query: 622 LSQEDRLLSMKE--KLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-NREFVEYLNHVGLGH 678
+S D+ S K +L L +WC +EWFYS ID P F + +F L +
Sbjct: 1 MSTPDKKASQKIGLRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKE-SFPN 59
Query: 679 IP--RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
+ +LTRVEWG IR +GKPRR S F +ER LKQ R+
Sbjct: 60 LKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 100
Score = 63 (27.2 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 726 KTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
+ R +HDG + +D + RV FDR LG + + D + + + P + MP A
Sbjct: 136 RLRGVHDGLFTGQIEAVDTLNATYRVTFDRAGLGTQTIPDYEVLSNEPHETMPIA 190
>WB|WBGene00002998 [details] [associations]
symbol:lin-9 species:6239 "Caenorhabditis elegans"
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IGI;IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0008584 "male gonad development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0070176 "DRM complex" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0006351
GO:GO:0008584 GO:GO:0040035 eggNOG:NOG148048 InterPro:IPR010561
Pfam:PF06584 GO:GO:0045138 GO:GO:0040027 EMBL:Z11115 GO:GO:0070176
EMBL:AF269693 EMBL:AF269694 PIR:A88542 PIR:S15794
RefSeq:NP_001023015.1 RefSeq:NP_001023016.1 UniGene:Cel.19461
ProteinModelPortal:P30630 STRING:P30630 PaxDb:P30630 PRIDE:P30630
EnsemblMetazoa:ZK637.7b.1 EnsemblMetazoa:ZK637.7b.2 GeneID:176256
KEGG:cel:CELE_ZK637.7 UCSC:ZK637.7b.2 CTD:176256 WormBase:ZK637.7a
WormBase:ZK637.7b GeneTree:ENSGT00390000003188 HOGENOM:HOG000018119
InParanoid:P30630 OMA:KPRRCSQ NextBio:891788 Uniprot:P30630
Length = 644
Score = 148 (57.2 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 50/155 (32%), Positives = 70/155 (45%)
Query: 602 SSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPW 661
+ +E KT N+ S + + +KL L R+W E+FYSAID
Sbjct: 175 TDQERSAMMKQFKTYKNQTSEDVSTFMRANIKKLYNLLRYKKARQWVMCEFFYSAIDEQI 234
Query: 662 FSNR-EFVEYLNHVGLGHIPR--LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES 718
F EF + ++ LTR+EW IR LGKPRR SK F +ER L+ E
Sbjct: 235 FKEENEFATIIRE-SFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYLE---EK 290
Query: 719 RVIAIHPKTRELHDGSVL---TIDHDKCRVQFDRP 750
R+ K R +++GS L +ID + RP
Sbjct: 291 RM-----KIRSVYEGSYLNDPSIDLKDLPAKLPRP 320
Score = 58 (25.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1105 LITSCVATLLMIQTC-TERHTPADVAQIIDSAVSSLHPCC-PQNLPIYRE-IEMCMGRIK 1161
LI S A LL ++T T++ + D+ Q + A+S + P+N+ +++ +E+ M +
Sbjct: 569 LIQSLTAVLLQVRTMGTQKISAVDL-QSLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFH 627
Query: 1162 TQIL 1165
T +L
Sbjct: 628 TIML 631
Score = 44 (20.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 372 QRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESS 411
++ +K+L G +S ++N+L + L+ ML + ++ ESS
Sbjct: 58 KKSPAKRLNGGRDSPSVNSLTRNSSLT-MLAKAALDYESS 96
Score = 41 (19.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 744 RVQFDRPELGVEFVMDIDSMPSNPLD 769
R+ FD+P++ V D + + LD
Sbjct: 352 RIIFDKPDIPPTLVSDTEILLDGKLD 377
>UNIPROTKB|P30630 [details] [associations]
symbol:lin-9 "Protein lin-9" species:6239 "Caenorhabditis
elegans" [GO:0070176 "DRM complex" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0006351
GO:GO:0008584 GO:GO:0040035 eggNOG:NOG148048 InterPro:IPR010561
Pfam:PF06584 GO:GO:0045138 GO:GO:0040027 EMBL:Z11115 GO:GO:0070176
EMBL:AF269693 EMBL:AF269694 PIR:A88542 PIR:S15794
RefSeq:NP_001023015.1 RefSeq:NP_001023016.1 UniGene:Cel.19461
ProteinModelPortal:P30630 STRING:P30630 PaxDb:P30630 PRIDE:P30630
EnsemblMetazoa:ZK637.7b.1 EnsemblMetazoa:ZK637.7b.2 GeneID:176256
KEGG:cel:CELE_ZK637.7 UCSC:ZK637.7b.2 CTD:176256 WormBase:ZK637.7a
WormBase:ZK637.7b GeneTree:ENSGT00390000003188 HOGENOM:HOG000018119
InParanoid:P30630 OMA:KPRRCSQ NextBio:891788 Uniprot:P30630
Length = 644
Score = 148 (57.2 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 50/155 (32%), Positives = 70/155 (45%)
Query: 602 SSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPW 661
+ +E KT N+ S + + +KL L R+W E+FYSAID
Sbjct: 175 TDQERSAMMKQFKTYKNQTSEDVSTFMRANIKKLYNLLRYKKARQWVMCEFFYSAIDEQI 234
Query: 662 FSNR-EFVEYLNHVGLGHIPR--LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES 718
F EF + ++ LTR+EW IR LGKPRR SK F +ER L+ E
Sbjct: 235 FKEENEFATIIRE-SFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYLE---EK 290
Query: 719 RVIAIHPKTRELHDGSVL---TIDHDKCRVQFDRP 750
R+ K R +++GS L +ID + RP
Sbjct: 291 RM-----KIRSVYEGSYLNDPSIDLKDLPAKLPRP 320
Score = 58 (25.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1105 LITSCVATLLMIQTC-TERHTPADVAQIIDSAVSSLHPCC-PQNLPIYRE-IEMCMGRIK 1161
LI S A LL ++T T++ + D+ Q + A+S + P+N+ +++ +E+ M +
Sbjct: 569 LIQSLTAVLLQVRTMGTQKISAVDL-QSLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFH 627
Query: 1162 TQIL 1165
T +L
Sbjct: 628 TIML 631
Score = 44 (20.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 372 QRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESS 411
++ +K+L G +S ++N+L + L+ ML + ++ ESS
Sbjct: 58 KKSPAKRLNGGRDSPSVNSLTRNSSLT-MLAKAALDYESS 96
Score = 41 (19.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 744 RVQFDRPELGVEFVMDIDSMPSNPLD 769
R+ FD+P++ V D + + LD
Sbjct: 352 RIIFDKPDIPPTLVSDTEILLDGKLD 377
>FB|FBgn0023509 [details] [associations]
symbol:mip130 "Myb-interacting protein 130" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0007307 "eggshell chorion gene amplification"
evidence=IC] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0051297
"centrosome organization" evidence=IMP] GO:GO:0005634 GO:GO:0007052
GO:GO:0051297 GO:GO:0003677 EMBL:AE014298 GO:GO:0000785
GO:GO:0000122 GO:GO:0005700 InterPro:IPR010561 Pfam:PF06584
GO:GO:0031523 GO:GO:0007307 GeneTree:ENSGT00390000003188
FlyBase:FBgn0023509 EMBL:AY819021 EMBL:BT021408 RefSeq:NP_569958.2
UniGene:Dm.33569 DIP:DIP-18949N IntAct:Q9W542 MINT:MINT-1730938
STRING:Q9W542 EnsemblMetazoa:FBtr0070315 GeneID:31153
KEGG:dme:Dmel_CG3480 UCSC:CG3480-RA CTD:31153 InParanoid:Q9W542
OMA:SENFHEM GenomeRNAi:31153 NextBio:772187 Uniprot:Q9W542
Length = 986
Score = 144 (55.7 bits), Expect = 3.2e-05, Sum P(5) = 3.2e-05
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRL-TRV----EWG 688
+L L +W EWFYS +D P F R+ E++NHV PRL TR EW
Sbjct: 292 RLRNLLKLPKAHKWAIAEWFYSYVDKPLFECRD--EFMNHVN-ELAPRLGTRSLIRHEWV 348
Query: 689 VIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
IR +G+PRR S +F +ER++L + R+
Sbjct: 349 NIRRRMGRPRRCSAKFFSEERKELDRKRQ 377
Score = 54 (24.1 bits), Expect = 3.2e-05, Sum P(5) = 3.2e-05
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 403 DSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIK 443
D ++ + ++ +EE D +D P+ S P+E+++
Sbjct: 59 DLNLDEDDEMEEEEEEEHADEEDDDEEPDSNENSAPEEQVE 99
Score = 42 (19.8 bits), Expect = 3.2e-05, Sum P(5) = 3.2e-05
Identities = 19/89 (21%), Positives = 33/89 (37%)
Query: 1020 KAMSSVKEGEDAYTKIGEA----LDHID--KRQLTSDPRVSVIR-----SPEQVNGSLGH 1068
K++S V +G+D + DH+ K +P + SP+QV G
Sbjct: 777 KSLSRVADGDDDIKSLKSEDETDEDHVQDHKHGADEEPAADTSKTKAKGSPKQVEGKENS 836
Query: 1069 HNHFVSGTCDPQPTNNASGTKLQDVSDKN 1097
+ + P T+ KL+ +N
Sbjct: 837 EVDKMDHSSHPMDTDTEKEEKLESGGSEN 865
Score = 40 (19.1 bits), Expect = 3.2e-05, Sum P(5) = 3.2e-05
Identities = 24/107 (22%), Positives = 44/107 (41%)
Query: 744 RVQFDRPELGVEFVMDIDSMPSNPLDNMP-EALRRQISADKFSAISKELQVNGHPNFGSP 802
RV F+R LG + D + + N + +P + + + S I + + N G
Sbjct: 441 RVTFERIGLGTHAIPDYEIVSENFHEMLPLHSFTKDFRPNLMS-IYQTNNLGFTTNLGFT 499
Query: 803 MLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQA 849
++ +L+K + A + PQ K LAT+ +A+ A
Sbjct: 500 ANLTNN-YLQKKEKIDGGAGAAAGAGSLYFKPQ-KHLATNNAAARNA 544
Score = 40 (19.1 bits), Expect = 0.00063, Sum P(5) = 0.00063
Identities = 19/93 (20%), Positives = 38/93 (40%)
Query: 199 IPLNKKD--RRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKSSPVQIW 256
+ +N+K +++ +D + +AL S+ GG+ V H + + + +
Sbjct: 11 VAVNQKGWGKKAGASVSDSAIRTQSAL-----SEGGGAIDVRPMEHDEEINREDLNLDED 65
Query: 257 DKMFPPAETAHPDAREA-----LNEEGCPEARI 284
D+M E H D + NE PE ++
Sbjct: 66 DEMEEEEEEEHADEEDDDEEPDSNENSAPEEQV 98
Score = 39 (18.8 bits), Expect = 3.2e-05, Sum P(5) = 3.2e-05
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 585 SPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPN---KNSLSQEDRLLSMKEKL-SG 637
+P+K +RK + R + S E + S QP K+ + + S+ KL SG
Sbjct: 187 TPSKVLKKRKGVVSRYMRSSEQGTNSVSASNQPQLLGKHKKATPSKSQSVGSKLGSG 243
>UNIPROTKB|F1NI68 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00818295 Ensembl:ENSGALT00000020019
ArrayExpress:F1NI68 Uniprot:F1NI68
Length = 2142
Score = 104 (41.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 89/436 (20%), Positives = 178/436 (40%)
Query: 511 VTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDL 570
V++T T+ + E + + + A +GK + ++ K R+ + S + A + +
Sbjct: 1396 VSNTQATK--KGEELDKLKEELAQQGKDLDSLKSVLEE-KENRIEKQES---ELTAELKI 1449
Query: 571 VAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQP-NKNSLSQEDRLL 629
A A + + T K +LKR K+M+ E + + Q K + ++ RL
Sbjct: 1450 QAAR-VAELEEHIAQKTSENDSLKEELKRYHEQKDMEQKEVARQLQQAEKVAFEKDSRLK 1508
Query: 630 SMKEKLS------GCLSSNMVRRWCTFEWFYSAIDYPWFSN-REFVEYLNHVGLGHIPRL 682
+EK+ G L + + F+ SAI +E E LN + L
Sbjct: 1509 EAEEKVLNLENEIGSLKAECEAKEREFDQMKSAILKSKEEELKELEERLNAENSCKLADL 1568
Query: 683 TRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTIDHDK 742
+ +G +R R + ++ ++LKQ RE++V + K +E + + +++ +K
Sbjct: 1569 KKKA----EQKIGSIKRELVRQMEEKEQQLKQDRENQVRHLEQKVQE-REAKIESLE-EK 1622
Query: 743 CRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALR--RQISADKFSAISKELQVNGH--PN 798
+ D EL E + I+S + E ++ +Q +K + + K+L
Sbjct: 1623 MKSVRDSTELEREMLQKIESTKAAVEQEKNEVIKSVQQTHEEKINKLQKDLIEKNKLLQK 1682
Query: 799 FGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQA--KSLATDIVSAQQAAYGQLCT 856
+ S D LE L+K + H Q+ + L ++ Q Y L
Sbjct: 1683 YESEQREGIDSLLELQSKQEELLKKLECAEKRHREEQSVTEGLREEL-EEQAKKYSLLVD 1741
Query: 857 -----VPQIQAREATVRALSEEALLMELKNTNNDILESQNGGESSLKD-SEPLKKHIATV 910
V Q + A+S +L ++K +++ + ++ L+D S ++++ ++
Sbjct: 1742 EHARCVGDFQKKMQEKDAVSH-SLEQKVKELEDNLAKVNEVHKTELEDRSLKYEENLKSL 1800
Query: 911 LVQLKEANDQACGFRE 926
QL+E ND+ F E
Sbjct: 1801 QQQLEERNDRLKAFEE 1816
Score = 90 (36.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 69/325 (21%), Positives = 137/325 (42%)
Query: 117 SERESNDASEMPR-KSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPR 175
+ERE ND + + ++++ + K +L A++E IS G + LKR N+
Sbjct: 855 TERE-NDIEHVKKVQNEEMEELKQKLLATEERIS-----TLQGDYENKLKRQE---NKME 905
Query: 176 AVKKRTPRFPVSYSQKKDDRDDYIPL---NKK----DRRSAVDANDDEVAHVAALALTEA 228
+K+++ ++ +K +++ + NK+ + S +A E+AH ++ + +A
Sbjct: 906 KMKQKSKEMQETFKKKLAEQESKLKKELENKQLEFSQKESEFNAKMLEMAHASSAGINDA 965
Query: 229 SQRGGSPQVSQSPHKKTEHGKSSPV--QIWDKMFPPAETAHPDAREALNEEGCPEARILN 286
+ S Q Q H + + W+K + A E L E+ E +
Sbjct: 966 VSKLESNQKEQLESLAEAHKRELEEISRSWEKKL------NQQAEE-LQEKH--EMELQE 1016
Query: 287 RRPENGAYTRARKSLM-DMEGVGTVEVHRXXXXXXXXXXXVEEVRNSLSDDEGE--ACSG 343
+ E G + + EG T E+ R +++++ L + A S
Sbjct: 1017 KEQELGDLKEKLATFSAEKEGSRT-EITRLKEEQVKRNETLKQLQEELKQSLAQMSALSN 1075
Query: 344 TEEGLSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDES--TAL-NALQTLADLSLM 400
+E GL ++ K+ ++S + + LQ Q R K + D++ T L + L+TL +
Sbjct: 1076 SESGLKAQLQKLEGDLSQSLKEKSGLQEQISRQKAIEEKDKARITELADKLKTLEEKLQT 1135
Query: 401 LPDSTMESESSVQLKEERTAFDIDD 425
L S + + + K E AF + +
Sbjct: 1136 LQSSHSKDRENYEKKIE--AFQLQE 1158
>UNIPROTKB|F1NMQ0 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005794 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00579194 Ensembl:ENSGALT00000037470
OMA:AQEVESE ArrayExpress:F1NMQ0 Uniprot:F1NMQ0
Length = 2150
Score = 104 (41.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 89/437 (20%), Positives = 178/437 (40%)
Query: 511 VTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDL 570
V++T T+ + E + + + A +GK + ++ K R+ + S + A + +
Sbjct: 1401 VSNTQATK--KGEELDKLKEELAQQGKDLDSLKSVLEE-KENRIEKQES---ELTAELKI 1454
Query: 571 VAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQP-NKNSLSQEDRLL 629
A A + + T K +LKR K+M+ E + + Q K + ++ RL
Sbjct: 1455 QAAR-VAELEEHIAQKTSENDSLKEELKRYHEQKDMEQKEVARQLQQAEKVAFEKDSRLK 1513
Query: 630 SMKEKLS------GCLSSNMVRRWCTFEWFYSAIDYPWFSN-REFVEYLNHVGLGHIPRL 682
+EK+ G L + + F+ SAI +E E LN + L
Sbjct: 1514 EAEEKVLNLENEIGSLKAECEAKEREFDQMKSAILKSKEEELKELEERLNAENSCKLADL 1573
Query: 683 TRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTIDHDK 742
+ +G +R R + ++ ++LKQ RE++V + K +E + + +++ +K
Sbjct: 1574 KKKA----EQKIGSIKRELVRQMEEKEQQLKQDRENQVRHLEQKVQE-REAKIESLE-EK 1627
Query: 743 CRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALR--RQISADKFSAISKELQVNGH--PN 798
+ D EL E + I+S + E ++ +Q +K + + K+L
Sbjct: 1628 MKSVRDSTELEREMLQKIESTKAAVEQEKNEVIKSVQQTHEEKINKLQKDLIEKNKLLQK 1687
Query: 799 FGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQA--KSLATDIVSAQQAAYGQL-- 854
+ S D LE L+K + H Q+ + L ++ Q Y L
Sbjct: 1688 YESEQREGIDSLLELQSKQEELLKKLECAEKRHREEQSVTEGLREEL-EEQAKKYSLLVD 1746
Query: 855 ----CTVPQIQAREATVRALSEEALLMELKNTNNDILESQNGGESSLKD-SEPLKKHIAT 909
C Q + A+S +L ++K +++ + ++ L+D S ++++ +
Sbjct: 1747 EHARCGGGDFQKKMQEKDAVSH-SLEQKVKELEDNLAKVNEVHKTELEDRSLKYEENLKS 1805
Query: 910 VLVQLKEANDQACGFRE 926
+ QL+E ND+ F E
Sbjct: 1806 LQQQLEERNDRLKAFEE 1822
Score = 90 (36.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 69/325 (21%), Positives = 137/325 (42%)
Query: 117 SERESNDASEMPR-KSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPR 175
+ERE ND + + ++++ + K +L A++E IS G + LKR N+
Sbjct: 860 TERE-NDIEHVKKVQNEEMEELKQKLLATEERIS-----TLQGDYENKLKRQE---NKME 910
Query: 176 AVKKRTPRFPVSYSQKKDDRDDYIPL---NKK----DRRSAVDANDDEVAHVAALALTEA 228
+K+++ ++ +K +++ + NK+ + S +A E+AH ++ + +A
Sbjct: 911 KMKQKSKEMQETFKKKLAEQESKLKKELENKQLEFSQKESEFNAKMLEMAHASSAGINDA 970
Query: 229 SQRGGSPQVSQSPHKKTEHGKSSPV--QIWDKMFPPAETAHPDAREALNEEGCPEARILN 286
+ S Q Q H + + W+K + A E L E+ E +
Sbjct: 971 VSKLESNQKEQLESLAEAHKRELEEISRSWEKKL------NQQAEE-LQEKH--EMELQE 1021
Query: 287 RRPENGAYTRARKSLM-DMEGVGTVEVHRXXXXXXXXXXXVEEVRNSLSDDEGE--ACSG 343
+ E G + + EG T E+ R +++++ L + A S
Sbjct: 1022 KEQELGDLKEKLATFSAEKEGSRT-EITRLKEEQVKRNETLKQLQEELKQSLAQMSALSN 1080
Query: 344 TEEGLSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDES--TAL-NALQTLADLSLM 400
+E GL ++ K+ ++S + + LQ Q R K + D++ T L + L+TL +
Sbjct: 1081 SESGLKAQLQKLEGDLSQSLKEKSGLQEQISRQKAIEEKDKARITELADKLKTLEEKLQT 1140
Query: 401 LPDSTMESESSVQLKEERTAFDIDD 425
L S + + + K E AF + +
Sbjct: 1141 LQSSHSKDRENYEKKIE--AFQLQE 1163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.361 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1172 1131 0.00090 123 3 11 23 0.46 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 626 (67 KB)
Total size of DFA: 498 KB (2231 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 124.20u 0.11s 124.31t Elapsed: 00:00:07
Total cpu time: 124.21u 0.11s 124.32t Elapsed: 00:00:07
Start: Thu May 9 13:45:26 2013 End: Thu May 9 13:45:33 2013