BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044351
         (1172 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|356533577|ref|XP_003535339.1| PREDICTED: protein ALWAYS EARLY 2-like [Glycine max]
          Length = 1126

 Score = 1118 bits (2891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/1223 (53%), Positives = 805/1223 (65%), Gaps = 150/1223 (12%)

Query: 1    MAPTRKSRSVNKRYA--NEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYR 57
            MAPTRKSRSVNKR +  N+ SP KD ++ +KSKQ+K KL+DKLG QWSK EL+RFYEAYR
Sbjct: 1    MAPTRKSRSVNKRMSSSNDNSPEKDGVNSNKSKQRKRKLTDKLGSQWSKEELERFYEAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             YGKDWKKVAA VRNRS EMVEALY+MNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS
Sbjct: 61   KYGKDWKKVAAVVRNRSTEMVEALYSMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQ--PR 175
            ERESNDA    RK  KRKR KVQLS SK+   QS S+A++  CLS+LK+ R DG Q  P 
Sbjct: 121  ERESNDAPG-SRKPVKRKREKVQLSISKD---QSHSIASSDDCLSILKKRRFDGIQLKPH 176

Query: 176  AVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSP 235
            AV KRTPR PV    KKDD ++Y+   ++  +S +DANDDEVAHV ALALTEA+QRGGSP
Sbjct: 177  AVGKRTPRVPV---YKKDDTENYVSPYRRSLKSTIDANDDEVAHVVALALTEAAQRGGSP 233

Query: 236  QVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYT 295
            QVSQ+P ++ E  KSSP+Q W++    ++TA     +   ++   E  I +R  EN  Y 
Sbjct: 234  QVSQTPSRRVEQ-KSSPIQSWERKHQMSKTARAKFPDVSVDKEVLEGSIESRGAENEEYA 292

Query: 296  RARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLS--SRKG 353
            +   SLMD EG+ T EV +K  +FYRK+ +V+ V N   DD GEACSGTEEGLS  S K 
Sbjct: 293  KDNSSLMDTEGIDTAEVFQKEGQFYRKRERVKNVGNHQLDDGGEACSGTEEGLSFNSLKE 352

Query: 354  KVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQ 413
            KV  E++N K +    +  RKR+KKLFFGDE+ ALNALQTLADLSLM+P STMESESS+Q
Sbjct: 353  KVDIEVTNEKLEKFSPKSHRKRNKKLFFGDETPALNALQTLADLSLMMPISTMESESSIQ 412

Query: 414  LKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSG 473
            LK ER   D +++S+ PE TSTSH + K+K+        + + + E +  ++SK G+   
Sbjct: 413  LKGERMVADKNNRSALPEATSTSHKRHKLKY--------SVVPKIEVLTSKESKTGKEPT 464

Query: 474  NDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFA 533
             D   ++E KE+    ++  KRKRKS+ SK  S   A  D++ +  L+ EA+ ++ NK  
Sbjct: 465  KDTNALSESKEKLPFADTAWKRKRKSMGSKVAS---AKLDSYPSGPLKDEAL-DDGNKPV 520

Query: 534  SKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRR 593
             KGK T Q     KQ K  +  E S  +DQ     DL   T + P+ +  S PTK Q +R
Sbjct: 521  VKGKHTDQAFTLPKQLKTVKSSESSLCSDQK----DLTVSTAEIPLLNEVSLPTK-QRKR 575

Query: 594  KMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWF 653
            KM L+R    KE K S+  LK+Q NK S        ++KEKLS CLSSNMVRRW  FEWF
Sbjct: 576  KMILQRTSLPKE-KSSDYILKSQSNKYS--------TLKEKLSSCLSSNMVRRWFVFEWF 626

Query: 654  YSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLK 713
            YSAIDYPWF+ REF+EYLNHVGLG+IPRLTRVEW VI+SSLGKPRR S+ FL +ER+KL+
Sbjct: 627  YSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERQKLE 686

Query: 714  QYRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRV 745
            QYRES                             VIA+HPKTRE+HDGSVLT+D+DKCR+
Sbjct: 687  QYRESVRKHYTELRTGIRDGLPTDLAKPLYVGQHVIALHPKTREIHDGSVLTVDYDKCRI 746

Query: 746  QFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLF 805
            QFDRPELGVEFVMDID MP N  DNMPEALRR I +   S ++KE Q++G+ NFG     
Sbjct: 747  QFDRPELGVEFVMDIDCMPLNSSDNMPEALRRHIGSPISSFMNKEPQISGNSNFGG---- 802

Query: 806  ASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREA 865
                                  +MNH+ P    +AT      QA   Q C V   QA+EA
Sbjct: 803  ---------------------CEMNHSSPVKAKVATVDNLCAQAGCAQPCKVTHHQAKEA 841

Query: 866  TVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEA 917
             ++A+SE        E LLMEL++ N+DILE++NG +  LKDSE  KKH ATVL+QLKEA
Sbjct: 842  DIQAVSELKHALDKKETLLMELRSANSDILENKNGID-CLKDSEVFKKHYATVLLQLKEA 900

Query: 918  NDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSW 977
            +                                    Q S A+LQ+RQ NT+  +S PSW
Sbjct: 901  SG-----------------------------------QVSDAMLQLRQRNTYRGNSLPSW 925

Query: 978  --PMHPANV-----KMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGED 1030
              P    NV      MLD+S ++QE GS V +++ GSRL+AH MVDAA +A+S  KEGED
Sbjct: 926  MKPQASFNVHDDLPSMLDSS-LTQELGSTVVQVIKGSRLRAHAMVDAAFQALSLAKEGED 984

Query: 1031 AYTKIGEALDHIDKRQLTSDPRVSVIRSPEQV--NGSLGHHNHFVSGTCDPQPTNNASGT 1088
            A+ KIG+ALD I+ +QL S  R+ VIRS EQV  NGS  H NH  SG  +P   N+ S  
Sbjct: 985  AFIKIGQALDSINHQQLASQSRLPVIRSQEQVNANGSFYHLNHSTSGVSEP-ILNDPSLP 1043

Query: 1089 KLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNL 1147
            K  + SDK + ++PS+LITSCVATL+MIQTCTER + PADVAQI+DSAV+SLHPCC QNL
Sbjct: 1044 KPHNCSDKFDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCSQNL 1103

Query: 1148 PIYREIEMCMGRIKTQILALIPT 1170
            PIYREI+MCMGRIKTQ+LALIPT
Sbjct: 1104 PIYREIQMCMGRIKTQMLALIPT 1126


>gi|356574947|ref|XP_003555604.1| PREDICTED: protein ALWAYS EARLY 2-like [Glycine max]
          Length = 1120

 Score = 1103 bits (2854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1222 (52%), Positives = 797/1222 (65%), Gaps = 154/1222 (12%)

Query: 1    MAPTRKSRSVNKRYA--NEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRN 58
            MAPTRKSRSVNKR +  N+ SP KD I+ +K+K +KKL+DKLG QWSK EL+RFYEAYR 
Sbjct: 1    MAPTRKSRSVNKRMSSSNDNSPEKDGINSNKNKLRKKLTDKLGSQWSKEELERFYEAYRK 60

Query: 59   YGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
            YGKDWKKVAA +RNRS EMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE
Sbjct: 61   YGKDWKKVAAFIRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 120

Query: 119  RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQ--PRA 176
            RESNDA    +K  KRK  +VQLS SK+   QS S+A+   CLS+LK+ R DG Q  P A
Sbjct: 121  RESNDAPG-SQKPVKRKHEEVQLSVSKD---QSHSIASRDDCLSILKKRRFDGMQLKPYA 176

Query: 177  VKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQ 236
            V KRTPR PV    KKDD ++Y+   ++  +S +DANDDEVAHV ALALTEA+ RGGSPQ
Sbjct: 177  VGKRTPRVPV---YKKDDTENYVSPYRRSLKSTIDANDDEVAHVVALALTEAAHRGGSPQ 233

Query: 237  VSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTR 296
            VSQ+P ++ E  KSSP+Q  ++    +ETA     +   +E   E+ I +R  ENG Y R
Sbjct: 234  VSQTPSRRVEQ-KSSPIQSLERKHQMSETACAKFHDVSVDEEVLESSIESRGAENGEYAR 292

Query: 297  ARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGL--SSRKGK 354
               SLMD EG+ TV+V +K K FYRK+ +VE V N   DD GEACSGTEEGL  SS K K
Sbjct: 293  DNSSLMDTEGISTVKVFQKRKIFYRKRERVENVGNHQLDDGGEACSGTEEGLSFSSLKEK 352

Query: 355  VGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQL 414
            V  +++N K +    + QRKR+KK     E+ ALNALQTLADLSLM+P STMESESS+Q 
Sbjct: 353  VDIDVTNEKLEKFSPKSQRKRNKK----HETPALNALQTLADLSLMMPISTMESESSIQF 408

Query: 415  KEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGN 474
            K ER   D ++KS+  E TST+H + ++KH        + + E E    +KSK+G+ S  
Sbjct: 409  KGERMVADKNNKSALLEATSTNHKRHQLKH--------SAVPEIEVSTSKKSKIGKESTK 460

Query: 475  DVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFAS 534
            D   ++E K +    ++  K+KRKS +  K++N  A  D++ +  L+ EA+ ++ NK   
Sbjct: 461  DTNVLSESKGKLPFADTTWKKKRKS-MGSKVAN--AKLDSYPSGPLKDEAL-DDDNKPVV 516

Query: 535  KGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRK 594
            KGK T Q     KQ K  +  E S  +DQ     DL   T + P+ +  S PTK +SRRK
Sbjct: 517  KGKHTDQAFTLPKQLKTVKSSESSFCSDQK----DLTVSTAEVPLLNEVSLPTK-RSRRK 571

Query: 595  MDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFY 654
            M L+R    KE K S+  LK+QPNK S        ++K K+S CL+SNMVRRW  FEWFY
Sbjct: 572  MILQRTSLPKE-KSSDYILKSQPNKYS--------TLKAKVSSCLASNMVRRWFIFEWFY 622

Query: 655  SAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQ 714
            SAIDYPWF+ REF+EYLNHVGLG+IPRLTRVEW VI+SSLGKPRR S+ FL +ER KL+Q
Sbjct: 623  SAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERHKLEQ 682

Query: 715  YRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQ 746
            YRES                            RVIA+HPKTRE+HDGSVLT+D+DKCR+Q
Sbjct: 683  YRESVRKHYTELRTGIRDGLPTDLAKPLYVGQRVIALHPKTREIHDGSVLTVDYDKCRIQ 742

Query: 747  FDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFA 806
            FDRPELGVEFVMDID MP NP DNMPEALRR I + K S ++KE Q+NG+ NFG      
Sbjct: 743  FDRPELGVEFVMDIDCMPLNPSDNMPEALRRHIGSQKASFMNKEPQINGNSNFG------ 796

Query: 807  SDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREAT 866
                                G   H+ P    +AT      QA   Q C V   QA+EA 
Sbjct: 797  --------------------GCEMHSFPVKAKVATVDNLCAQAGCAQPCKVTHHQAKEAD 836

Query: 867  VRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEAN 918
            + A+SE        E LLMEL++ N+DILE+QNG E  LKDSE  KKH ATVLV+LKEA+
Sbjct: 837  IHAVSELKRALDKKETLLMELRSANSDILENQNGIE-CLKDSEVFKKHYATVLVELKEAS 895

Query: 919  DQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSW- 977
                                                Q S A+LQ+RQ NT+  +S P W 
Sbjct: 896  G-----------------------------------QVSDAMLQLRQRNTYRGNSLPPWM 920

Query: 978  -PMHPANVK-----MLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDA 1031
             P    NV      MLD+S ++QE GS V +++ GSRL+AH MVDAA +A+S  KEGEDA
Sbjct: 921  KPQASFNVHDDLPGMLDSS-LTQELGSTVVQVIKGSRLRAHAMVDAAFEALSLTKEGEDA 979

Query: 1032 YTKIGEALDHIDKRQLTSDPRVSVIRSPEQ--VNGSLGHHNHFVSGTCDPQPTNNASGTK 1089
            + KIG+ALD I+ +QL S  R+ VIRS EQ  VNGS  H +H  SG  +P   N+ S  K
Sbjct: 980  FIKIGQALDSINHQQLASKSRLPVIRSQEQVNVNGSFYHLSHSTSGVSEP-ILNDPSVPK 1038

Query: 1090 LQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLP 1148
              + SDK + ++PS+LI SCVATL+MIQTCTER + PADVAQI+DSAV+SLHPCCPQNLP
Sbjct: 1039 PHNYSDKFDTELPSDLIASCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLP 1098

Query: 1149 IYREIEMCMGRIKTQILALIPT 1170
            IYREI+MCMGRIKTQ+LALIPT
Sbjct: 1099 IYREIQMCMGRIKTQMLALIPT 1120


>gi|357441687|ref|XP_003591121.1| Lin-9-like protein [Medicago truncatula]
 gi|355480169|gb|AES61372.1| Lin-9-like protein [Medicago truncatula]
          Length = 1139

 Score = 1098 bits (2841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 660/1233 (53%), Positives = 789/1233 (63%), Gaps = 157/1233 (12%)

Query: 1    MAPTRKSRSVNKRY--ANEVSPAKDVISPSKSKQ-KKKLSDKLGPQWSKGELQRFYEAYR 57
            MAPTRKSRSVNKR+  +N++SP KD +  SK+KQ KKKLSDKLG QWSKGEL+RFYEAYR
Sbjct: 1    MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             +GKDWKKVAA VRNRS EMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNV+E SDS
Sbjct: 61   KHGKDWKKVAAAVRNRSIEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDS 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAV 177
            ERESNDA    RK  KRKR K+QL+ SK+ + QS S+ ++ GCLSLLK+ RIDG QPRAV
Sbjct: 121  ERESNDAPG-SRKPVKRKREKLQLNVSKDPV-QSQSVTSSDGCLSLLKKRRIDGLQPRAV 178

Query: 178  KKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQV 237
             KRTPR PV +SQKKDDR++Y+  NK+  +S VD NDDEV HVA  AL+ ASQRGGSP V
Sbjct: 179  GKRTPRVPVYHSQKKDDRENYVSPNKRSLKSTVDGNDDEVEHVA-FALSRASQRGGSPLV 237

Query: 238  SQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRA 297
            SQ+P ++ E  K SP Q  D+M   +ETA      A  +    E  + +R  ENG Y R 
Sbjct: 238  SQTPRRRGEQ-KFSPAQSRDRMRQMSETARAKFHNASVDGEFLEGSLESRGAENGEYVRD 296

Query: 298  RKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGS 357
              SLMDMEG  T  V  KG KFYRKK +VE V N   DD GEACSGTEEGLS    K  +
Sbjct: 297  TSSLMDMEGTSTAGVP-KGGKFYRKKERVENVGNYQLDDGGEACSGTEEGLSFNSLKENN 355

Query: 358  -EISNAKNDHLPLQMQRKRSKKLFFG----------DESTALNALQTLADLSLMLPDSTM 406
             E++N K +      QRKR+KKL FG          DE  AL+ALQTLADLSLM+P S +
Sbjct: 356  MEVTNEKLEQFSPTSQRKRNKKLLFGGNSVNRDVFGDEIHALDALQTLADLSLMMPSSEV 415

Query: 407  ESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKS 466
            ESES VQLK ER   D DDKS+ PE TSTSH + K+K        +  +   +    +KS
Sbjct: 416  ESESCVQLKGERMMVDKDDKSALPESTSTSHKRNKVK--------IRAVPGPDTSTFKKS 467

Query: 467  KLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVA 526
            KL +   ND   ++E K+Q    +   KRK KS +SK +                     
Sbjct: 468  KL-KDIANDTNALSESKDQLPFADKTWKRKPKSTVSKAV--------------------- 505

Query: 527  EEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSP 586
            ++  K   KGK T Q  A  KQ K  +  E     DQ   ++     T + P+ S  SSP
Sbjct: 506  DDEKKTVIKGKFTDQVFASPKQIKTVKPSEVLLRADQKGFAVS----TSEIPLLSEVSSP 561

Query: 587  TKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRR 646
            TK +SRRKM  +R    KE  + EN LK+QPNK+S        + KEKLS CLSS +VRR
Sbjct: 562  TK-KSRRKMIFQRPSMRKEKSY-ENVLKSQPNKHS--------TQKEKLSSCLSSYLVRR 611

Query: 647  WCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLH 706
            W T EWFYSA+DYPWF+ REFVEYLNHVGLG+IPRLTRVEW VI+SSLGKPRR S+ FLH
Sbjct: 612  WFTSEWFYSALDYPWFAKREFVEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLH 671

Query: 707  DEREKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTI 738
            +ER+KL+QYRES                            RVIAIHPKTRE+HDGSVLT+
Sbjct: 672  EERQKLEQYRESVRKHYSELRNGIRDGLPTDLARPLYVGQRVIAIHPKTREIHDGSVLTV 731

Query: 739  DHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPN 798
            DHDKCR+QFDRP+LGVEF+ DID MP NPLDNMPEALRRQI A K S  + E  +NG+ +
Sbjct: 732  DHDKCRIQFDRPQLGVEFITDIDCMPLNPLDNMPEALRRQIGARKASFTTIEPHINGNSS 791

Query: 799  FGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVP 858
            FG   + AS   +  +    + L KQ K D NH   QA     ++ +  QAA  Q C V 
Sbjct: 792  FGGCEMHASPVKVRPSS---SALVKQGKVDANHVTSQAN--IGNLCA--QAASAQPCKVM 844

Query: 859  QIQAREATVRALSE------------EALLMELKNTNNDILESQNGGESSLKDSEPLKKH 906
            Q Q++EA + ALSE            + LL EL+N NN ILE+QNG E  LKDSE  KKH
Sbjct: 845  QHQSKEADIHALSELKRALDKKLLLQDTLLAELRNANNGILENQNGIEC-LKDSEGFKKH 903

Query: 907  IATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQC 966
             ATVLV+LKEA+ Q                                    S  +LQ+RQ 
Sbjct: 904  YATVLVELKEASGQV-----------------------------------SDTMLQLRQR 928

Query: 967  NTHPESSRPSWPMHPANVK-------MLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAV 1019
            NT+ E+S P W    AN +       MLD+S ++QES S V EI+ GSRL+AH M+DAA 
Sbjct: 929  NTYTETSLPPWMKPKANFEGHDDLPNMLDSS-MTQESRSTVIEIIKGSRLQAHAMLDAAF 987

Query: 1020 KAMS-SVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCD 1078
            +A S + KEG+DA TKIG+ALD ID +QL+S  R  VIRS +QVNGS  H N       +
Sbjct: 988  QAWSQATKEGKDAITKIGQALDSIDYQQLSSKYRSPVIRSQDQVNGSYYHANQSTCRASE 1047

Query: 1079 PQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQIIDSAVS 1137
            P   N+ASG KL   SD+ E +IP ELITSCVATL MIQ+CTER + PADVAQI+DSAV+
Sbjct: 1048 PL-LNDASGLKLHKDSDEVEIEIPFELITSCVATLTMIQSCTERQYPPADVAQILDSAVT 1106

Query: 1138 SLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            SL PC  +NLPIYREI+MCMGRIKTQILALIPT
Sbjct: 1107 SLQPCDTRNLPIYREIQMCMGRIKTQILALIPT 1139


>gi|296088361|emb|CBI36806.3| unnamed protein product [Vitis vinifera]
          Length = 1151

 Score = 1065 bits (2755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1243 (52%), Positives = 780/1243 (62%), Gaps = 167/1243 (13%)

Query: 1    MAPTRKSRSVNKRYAN--EVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYR 57
            MAPT+K R VNKR+ N  EVS  +D+ + +KS+Q+K KLSD LG QWSK EL+ FYEAYR
Sbjct: 1    MAPTKKYRGVNKRFLNSHEVSLDRDIENSTKSRQRKRKLSDMLGSQWSKEELEHFYEAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             YGKDWKKVA  VRNRS EMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNV+ G D+
Sbjct: 61   KYGKDWKKVAGVVRNRSLEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLGGGDN 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAV 177
            E  SND S  PRK+QK  R KV LS SKE++ Q  S+A   GCLSLLKRS  DG +P AV
Sbjct: 121  E--SNDVSGTPRKTQKPVRGKVHLSISKEELLQPPSVA-NDGCLSLLKRSLSDGIRPHAV 177

Query: 178  KKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQV 237
            +KRTPRFPVS S KK + + Y  LNK   RS +D  DDEVAHVAAL LTEAS R GS   
Sbjct: 178  RKRTPRFPVSCSYKKGNEESYFSLNKVSLRSDMDTTDDEVAHVAALTLTEASLREGS-HA 236

Query: 238  SQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRA 297
            SQ+P ++TEH K+SPVQ  ++M  P +         + +E   E  + +R  ENG Y   
Sbjct: 237  SQAPFRRTEHMKASPVQSRERM--PLQMVQTKIHGIVTDEDYFEGNLESRGAENGDYAGD 294

Query: 298  RKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTE-EGLSSRKGKVG 356
              SLMD E VGTV V ++GKKF   + KVEE+ N+  DD  EACS TE   ++  K K+ 
Sbjct: 295  TCSLMDSECVGTV-VLQEGKKFCDNE-KVEEIGNNQFDDCREACSDTEGHNMNPVKRKID 352

Query: 357  SEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKE 416
            +E++NAK +      QRKRSKKLFFGDES+AL+ALQTLADLSLM+PDS +ESESS+QLKE
Sbjct: 353  TEVTNAKIEPSSPCGQRKRSKKLFFGDESSALDALQTLADLSLMMPDSAVESESSIQLKE 412

Query: 417  ERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDV 476
            E+   D     +  E    SH ++K K +  KE+ +  I   E     K + GR S  DV
Sbjct: 413  EKITLD-----NVHEAMFASHQRDKNKLMVAKERVVKAIPGVEVTASIKYEHGRDSAIDV 467

Query: 477  ETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKG 536
              ++E +++PE  N   KRK KS+ SK                    A+AEE NK   KG
Sbjct: 468  NALSEAQQRPESNNKQLKRKDKSLASK--------------------ALAEEENKSMVKG 507

Query: 537  KRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMD 596
            +   Q +A SKQWK  R LE S  +DQ  A  DL   T     AS  + PTK +SRRKM 
Sbjct: 508  RHAGQIAALSKQWKSVRPLEHSLNSDQKEARNDLAGST-----ASHVNLPTKQRSRRKMH 562

Query: 597  LKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSA 656
            LK+ L  KEMK  ENS   Q +K S S +     +K+K+S  LSS M RRWCTFEWFYSA
Sbjct: 563  LKKTLIQKEMKSPENSFSKQSSKYSTSLQYSTDYLKKKISCSLSSYMARRWCTFEWFYSA 622

Query: 657  IDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYR 716
            IDYPWF  +EFVEYL+HVGLGHI RL+RVEW VIRSSLGKPRR S+RFLH+E+EKLKQYR
Sbjct: 623  IDYPWFVKKEFVEYLDHVGLGHIQRLSRVEWDVIRSSLGKPRRFSERFLHEEKEKLKQYR 682

Query: 717  ES----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQFD 748
            +S                            RVIA+HPKTRE+H+GSVLT+DHDKC VQFD
Sbjct: 683  KSVRTHYTELRTGAREGLPRDLARPLSVGQRVIALHPKTREVHNGSVLTVDHDKCMVQFD 742

Query: 749  RPELGVEFVMDIDSMPSNPLDNMPEALRRQIS-ADKFSAISKELQVNGHPNFGSPMLFAS 807
            R E+GVEFVMDID MPS+PLDNMPEALRRQ S   +F   SKE +V    N  +PM    
Sbjct: 743  RAEIGVEFVMDIDCMPSDPLDNMPEALRRQNSTVGQFLVNSKEQKVRHLVNAHTPM---- 798

Query: 808  DGHLEKAPILPNTLQKQAKGDMNHA----LPQAKSLATDIVSA------------QQAAY 851
                       N+L KQAK +        + Q K L ++I  +              A Y
Sbjct: 799  -----------NSLIKQAKHNRFRLTIDRISQEKYLLSEIDRSSLYQIFKSKHLGNNATY 847

Query: 852  GQLCTVPQIQAREATVRALSE-------------EALLMELKNTNNDILESQNGGESSLK 898
            GQ   V  +QARE  ++ALSE             EALLMEL++ NND+L +++G    LK
Sbjct: 848  GQPYMVA-VQAREDDIQALSELNCAFDKKCPFSTEALLMELRHANNDVLGNEDG---FLK 903

Query: 899  DSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASS 958
            DSE LKKH A VLV LKE                         + W          Q SS
Sbjct: 904  DSESLKKHCAMVLVHLKE-------------------------VLW----------QVSS 928

Query: 959  ALLQVRQCNTHPESSRPSW---------PMHPANVKMLDN-SHVSQESGSAVAEIVNGSR 1008
            ALL +RQC  +P  + P W         P+ P +   LDN S  S E G  V EIV GSR
Sbjct: 929  ALLYLRQCEAYPGKTLPPWLTTSTISSGPLMPPSS--LDNPSSTSLEPGFNVGEIVLGSR 986

Query: 1009 LKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGH 1068
             KAH MV AA+KA++S+K+GE+A+T+IG+ALD + K+QL SD  VSV+R  + VNGS  H
Sbjct: 987  SKAHKMVHAAMKAIASMKQGEEAFTRIGDALDSMHKQQLRSDSGVSVLRVLDPVNGSFAH 1046

Query: 1069 HNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPAD 1127
             N   S T +P  T++ASG KL + S K EA I SELITSCVA LLMIQTCTER + P+D
Sbjct: 1047 PNQLTSFTSEPLLTSHASGPKLPNDSGKIEAPIASELITSCVAALLMIQTCTERQYPPSD 1106

Query: 1128 VAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            VAQI+DSA+ SLHP CPQNLPIYREIEMCMGRIKTQILAL+PT
Sbjct: 1107 VAQILDSAIISLHPGCPQNLPIYREIEMCMGRIKTQILALVPT 1149


>gi|224125234|ref|XP_002319534.1| predicted protein [Populus trichocarpa]
 gi|222857910|gb|EEE95457.1| predicted protein [Populus trichocarpa]
          Length = 1007

 Score =  995 bits (2572), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1142 (52%), Positives = 714/1142 (62%), Gaps = 183/1142 (16%)

Query: 77   MVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDASEMPRKSQKRKR 136
            MVE LYNMNRAYLSLPEGTASVVGLIAMMTDHY+V+E S+SERESN+   + RK QKRK+
Sbjct: 1    MVETLYNMNRAYLSLPEGTASVVGLIAMMTDHYSVLEASESERESNEVPGVLRKLQKRKQ 60

Query: 137  AKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQP-RAVKKRTPRFPVSYSQKKDDR 195
             KVQLSASKED+ QS  +A+T GCLS LK   I   +P  +V KRTPRFPVS+  KKD+ 
Sbjct: 61   PKVQLSASKEDLQQSHMVASTDGCLSFLK---IGYGRPLHSVGKRTPRFPVSHQLKKDE- 116

Query: 196  DDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKSSPVQI 255
             +Y+   KK R+S ++A+D++  HVAAL LTE  QRG S QV Q+PH++TEH KSSP + 
Sbjct: 117  -NYVSPKKKHRKSEINADDNDDEHVAALTLTETLQRGDSAQVPQTPHRRTEHMKSSPPE- 174

Query: 256  WDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRARKSLMDMEGVGTVEVHRK 315
                  P         E  +E G        R   + AY R   SL +MEG+GTVEVHRK
Sbjct: 175  ----SSPENLCDASIYEHWSESGT------GRGGPDLAYVRDASSLAEMEGIGTVEVHRK 224

Query: 316  GKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSR--KGKVGSEISNAKNDHLPLQMQR 373
            GKKFY KK++VE++ NS SD  GEACSGTEE    R  KGKV  E+SNAK D    + QR
Sbjct: 225  GKKFYGKKVRVEKIGNSQSDGGGEACSGTEEEQKVRTLKGKVEIEMSNAKIDETSCRGQR 284

Query: 374  KRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEET 433
            KRSKKLF                            ESS QL EERTA   DDK S PE  
Sbjct: 285  KRSKKLF--------------------------SDESSAQLDEERTAQTEDDKCSVPESA 318

Query: 434  STSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKEQPEPP-NSM 492
            STSH +E+ K    KEKA++ +   + I  RKSKLGRY     + V+E  +QP+   N  
Sbjct: 319  STSHHRERTKLSRQKEKAISGV---DRITSRKSKLGRYPPISTKPVSEANKQPQSSSNGT 375

Query: 493  SKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPG 552
             KRKR++++SK                     + EE      KG+ + Q S+ SKQ    
Sbjct: 376  LKRKREALVSK--------------------VLDEEEITPVVKGRHSGQISSPSKQLNSL 415

Query: 553  RVLEGSSVN-DQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSEN 611
             + EGSS + DQ     DL   T Q PVAS    PT+  SRRKMDLKR +  K  K S+ 
Sbjct: 416  ELPEGSSFSGDQKNVPNDLA--TAQVPVASQVILPTRKGSRRKMDLKRAMIPKVGKSSD- 472

Query: 612  SLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYL 671
                                  KLS  LSS MVRRWCTFEWFYSA+DYPWF+ REFVEYL
Sbjct: 473  ----------------------KLSCSLSSPMVRRWCTFEWFYSAVDYPWFAKREFVEYL 510

Query: 672  NHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES------------- 718
            NHVGLGHIPRLTRVEWGVIRSSLG+PRR S+RFLH+EREKL+QYRES             
Sbjct: 511  NHVGLGHIPRLTRVEWGVIRSSLGRPRRFSERFLHEEREKLQQYRESVRKHYMELRMGLR 570

Query: 719  ---------------RVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSM 763
                           RVIAIHPKTRELHDG VLT+DHD+CRVQFDR ELGVEFV DID M
Sbjct: 571  EGLPTDLARPLSVGQRVIAIHPKTRELHDGGVLTVDHDQCRVQFDRAELGVEFVKDIDCM 630

Query: 764  PSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQK 823
            PSNPLDNMPEALRRQ    + S + +EL VNG  N G   +F +  HL  A    N L K
Sbjct: 631  PSNPLDNMPEALRRQ----RISVLPRELLVNGKSNAG---VFTASEHLRSALSPKNALVK 683

Query: 824  QAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSE--------EAL 875
            QA+ ++N A+P AK ++TDIV+ Q     Q   V QIQ +E+ ++ALSE        EA 
Sbjct: 684  QAQVEVNCAIPLAKGVSTDIVNVQGVCR-QPSMVAQIQPKESDIQALSELNRALDRKEAW 742

Query: 876  LMELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYL 935
            LMELKNTNNDI+E+   G++ LK SEPL K++A VLVQLKEAN             SC  
Sbjct: 743  LMELKNTNNDIMENPKNGDNYLKYSEPL-KNLAAVLVQLKEAN-------------SC-- 786

Query: 936  SLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSWPMHPANV------KMLDN 989
                                ASSALL +RQ NT+P ++ P W   PAN       +   +
Sbjct: 787  --------------------ASSALLHLRQHNTYPINNLPGWLKPPANSCFSGMPRPHTS 826

Query: 990  SHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTS 1049
            S VSQESGSAV EIV GSRLKAH MVD AV+A+SS+KEGED + +IGEALD +D+R L S
Sbjct: 827  SFVSQESGSAVLEIVRGSRLKAHNMVDVAVQAISSMKEGEDTFVRIGEALDSMDRRHLGS 886

Query: 1050 DPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSC 1109
            + RV +IR+PE V+G L   N  +  T +PQ  +NAS  +  D SDK E  IPS+LI+SC
Sbjct: 887  EYRVQMIRAPEGVSGGLRLQNQLILSTSEPQVNSNASRPQSND-SDKTETVIPSDLISSC 945

Query: 1110 VATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALI 1168
            VA LLMIQTC+ER + P+DVAQIIDSAV+SL PCCPQNLPIYREI+MCMGRIKTQILALI
Sbjct: 946  VAALLMIQTCSERQYPPSDVAQIIDSAVTSLQPCCPQNLPIYREIQMCMGRIKTQILALI 1005

Query: 1169 PT 1170
            PT
Sbjct: 1006 PT 1007


>gi|449432828|ref|XP_004134200.1| PREDICTED: LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like [Cucumis
            sativus]
          Length = 1161

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/1236 (46%), Positives = 728/1236 (58%), Gaps = 141/1236 (11%)

Query: 1    MAPTRKSRSVNKRY--ANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYR 57
            MAP+RKSRSVNK +  ANEVS +K V   SKSKQKK K +D LGPQWSK E+++FYEAYR
Sbjct: 1    MAPSRKSRSVNKXFSSANEVSSSKHVEDASKSKQKKRKFADLLGPQWSKDEVEQFYEAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             YGKDWKKVAA VRNRS EMVEAL+ MNRAYLSLPEGTASVVGLIAMMTDHY+V+  S+S
Sbjct: 61   KYGKDWKKVAAAVRNRSTEMVEALFTMNRAYLSLPEGTASVVGLIAMMTDHYSVLRDSES 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLS------ASKEDISQSWSMAATGGCLSLLKRSRIDG 171
            E+ESN+ S   RK QKR R K + S      A   D SQS  +    GCLSLLK+ R  G
Sbjct: 121  EQESNEDSGAIRKPQKRLRGKSRSSNLKGSDAHFGDASQSQLLLTNYGCLSLLKKRR-SG 179

Query: 172  NQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAV-DANDDEVAHVAALALTEASQ 230
             +P AV KRTPR PVSYS  KD RD     +K + ++ V D NDD+VAH  AL LTEASQ
Sbjct: 180  IKPHAVGKRTPRVPVSYSYDKDGRDKLFSPSKHNSKAKVDDPNDDDVAHEIALVLTEASQ 239

Query: 231  RGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPE 290
            R GSPQ+SQ+P+ K E    SP++  D+M   ++      R +  +EG  E  + +   +
Sbjct: 240  RDGSPQLSQTPNPKIESHVLSPIRN-DRMRSESDMMSTKFRCSEMDEGGCELSLGSTGAD 298

Query: 291  NGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGL-- 348
            N  Y        D+ G  T EV RKGK++Y KK +VEE   +  DD  EACSGTEEG   
Sbjct: 299  NADY--------DL-GKSTREVQRKGKRYYGKKPEVEESMYNHLDDIKEACSGTEEGQKS 349

Query: 349  SSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMES 408
             S +GK+ +E  + K+     +  RKRSKK  FGDE +A +ALQTLADLSLM+PD+  E+
Sbjct: 350  GSLRGKLENEDLDVKSVRSSFKGPRKRSKKALFGDECSAFDALQTLADLSLMMPDTNAET 409

Query: 409  ESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKL 468
            E   ++KEE    D+  KS                    K K  +++  +E    + SK 
Sbjct: 410  EPPAKVKEEN--LDVMGKS--------------------KMKGSHSVAGSEISALKTSKT 447

Query: 469  GRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEE 528
            G+  G++V  ++E +      N   KRK KS    KIS+ +   D+ +  TL+ +A A+E
Sbjct: 448  GKAFGSNVGPISEAEGIQGSNNGNRKRKLKSS-PFKISSKDEDNDSRLHDTLKIKA-ADE 505

Query: 529  HNKFASKGKRTSQNSAQSKQWKPGRVLE--GSSVNDQNRASIDLVAPTGQAPVASPASSP 586
                  K KR+  N A  K  K  + L+   SS  D  R   D    T Q    +P S P
Sbjct: 506  AKSSVGKVKRSPHN-AGLKSGKISKPLDHHSSSSTDHKREDGDYALSTAQVLSNNPISLP 564

Query: 587  TKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRR 646
            TK +SRRKM L +  S ++ K S+++   Q N  + + +DR   +KE+ S CLS + +RR
Sbjct: 565  TKLRSRRKMKLWK--SQRDAKISDSTSIDQLNITAQTIDDRQHDLKERHSSCLSWHKLRR 622

Query: 647  WCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLH 706
            WC FEWFYSAID+PWF+  EFVEYLNHVGLGHIPRLTRVEWGVIRSSLG+PRR S +FL 
Sbjct: 623  WCIFEWFYSAIDFPWFAKCEFVEYLNHVGLGHIPRLTRVEWGVIRSSLGRPRRFSAQFLK 682

Query: 707  DEREKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTI 738
            +E++KL QYRES                            RVIAIHPKTRE+HDGSVLT+
Sbjct: 683  EEKQKLNQYRESVRKHYAELRAGTREGLPTDLARPLSVGQRVIAIHPKTREIHDGSVLTV 742

Query: 739  DHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISADKFSAISKELQVNG-- 795
            D+ +CRVQFDRPELGVEFVMDI+ MP NP++NMP  L R  ++ DK      E+++NG  
Sbjct: 743  DYSRCRVQFDRPELGVEFVMDIECMPLNPVENMPANLSRHGVTLDKIFGNLNEVKINGLL 802

Query: 796  -HPNFGSPMLFASDGHLEKAP----ILPNT-----LQKQAKGDMNHALPQAKSLATDIVS 845
                    M   S+  LE       I P+T     L KQAK D+  +  QAK   ++ V 
Sbjct: 803  KEAKIEDYMKSTSNDKLESTEGSVYISPSTHHINKLIKQAKVDLGCSNLQAKFGLSETVG 862

Query: 846  AQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSL 897
             QQ    Q   + QIQA+EA V ALSE        E ++ ELK  N+++LE+Q  G++ L
Sbjct: 863  IQQETSSQPSALAQIQAKEADVHALSELSRALDKKEVVVSELKRLNDEVLENQINGDNLL 922

Query: 898  KDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQAS 957
            KDSE  KK  A VL+QL E N+                                   Q S
Sbjct: 923  KDSENFKKQYAAVLLQLNEVNE-----------------------------------QVS 947

Query: 958  SALLQVRQCNTHPESSRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDA 1017
            SAL  +RQ NT+ + + P   + P +      SH SQE GS VAEIV  SR KA TM+D 
Sbjct: 948  SALYCLRQRNTY-QGTSPLMFLKPVHDSGDPCSH-SQEPGSHVAEIVGSSRAKAQTMIDE 1005

Query: 1018 AVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS--PEQVNGSLGHHNHFVSG 1075
            A++A+ ++K+GE     I EA+D +  R    D  +  +RS   +  N +    NHF + 
Sbjct: 1006 AMQAILALKKGESNLENIEEAIDFVSNRLTVDDLALPTVRSAAADTSNAAPVSQNHFNAC 1065

Query: 1076 TCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT-PADVAQIIDS 1134
            T +    +   G K    SDK E +IPSELI  CVATLLMIQ CTER   P+DVAQ++DS
Sbjct: 1066 TSNTSTASFVVGPKSNGSSDKTEMEIPSELIAHCVATLLMIQKCTERQFPPSDVAQVLDS 1125

Query: 1135 AVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            AVSSL PCCPQNLP+Y EI+ CMG I++QILALIPT
Sbjct: 1126 AVSSLQPCCPQNLPLYAEIQKCMGIIRSQILALIPT 1161


>gi|449495452|ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucumis sativus]
          Length = 1161

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/1236 (46%), Positives = 728/1236 (58%), Gaps = 141/1236 (11%)

Query: 1    MAPTRKSRSVNKRY--ANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYR 57
            MAP+RKSRSVNKR+  ANE S +K V   SKSKQKK K +D LGPQWSK E+++FYEAYR
Sbjct: 1    MAPSRKSRSVNKRFSSANEASSSKYVEDASKSKQKKRKFADLLGPQWSKDEVEQFYEAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             YGKDWKKVAA VRNRS EMVEAL+ MNRAYLSLPEGTASVVGLIAMMTDHY+V+  S+S
Sbjct: 61   KYGKDWKKVAAAVRNRSTEMVEALFTMNRAYLSLPEGTASVVGLIAMMTDHYSVLRDSES 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLS------ASKEDISQSWSMAATGGCLSLLKRSRIDG 171
            E+ESN+ S   RK QKR R K + S      A   D SQS  +    GCLSLLK+ R  G
Sbjct: 121  EQESNEDSGAIRKPQKRLRGKSRSSNLKGSDAHFGDASQSQLLLTNYGCLSLLKKRR-SG 179

Query: 172  NQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAV-DANDDEVAHVAALALTEASQ 230
             +P AV KRTPR PVSYS  KD RD     +K + ++ V D NDD+VAH  AL LTEASQ
Sbjct: 180  IKPHAVGKRTPRVPVSYSYDKDGRDKLFSPSKHNSKAKVDDPNDDDVAHEIALVLTEASQ 239

Query: 231  RGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPE 290
            R GSPQ+SQ+P+ K E    SP++  D+M   ++      R +  +EG  E  + +   +
Sbjct: 240  RDGSPQLSQTPNPKIESHVLSPIRN-DRMRSESDMMSTKFRCSEMDEGGCELSLGSTGAD 298

Query: 291  NGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGL-- 348
            N  Y        D+ G  T EV RKGK++Y KK +VEE   +  DD  EACSGTEEG   
Sbjct: 299  NADY--------DL-GKSTREVQRKGKRYYGKKPEVEESMYNHLDDIKEACSGTEEGQKS 349

Query: 349  SSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMES 408
             S +GK+ +E  + K+     +  RKRSKK  FGDE +A +ALQTLADLSLM+PD+  E+
Sbjct: 350  GSLRGKLENEDLDVKSVRSSFKGPRKRSKKALFGDECSAFDALQTLADLSLMMPDTNAET 409

Query: 409  ESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKL 468
            E   ++KEE    D+  KS                    K K  +++  +E    + SK 
Sbjct: 410  EPPAKVKEEN--LDVMGKS--------------------KMKGSHSVAGSEISALKTSKT 447

Query: 469  GRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEE 528
            G+  G++V  ++E +      N   KRK KS    KIS+ +   D+ +  TL+ +A A+E
Sbjct: 448  GKAFGSNVGPISEAEGIQGSNNGNRKRKLKSS-PFKISSKDEDNDSRLHDTLKIKA-ADE 505

Query: 529  HNKFASKGKRTSQNSAQSKQWKPGRVLE--GSSVNDQNRASIDLVAPTGQAPVASPASSP 586
                  K KR+  N A  K  K  + L+   SS  D  R   D    T Q    +P S P
Sbjct: 506  AKSSVGKVKRSPHN-AGLKSGKISKPLDHHSSSSTDHKREDGDYALSTAQVLSNNPISLP 564

Query: 587  TKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRR 646
            TK +SRRKM L +  S ++ K S+++   Q N  + + +DR   +KE+ S CLS + +RR
Sbjct: 565  TKLRSRRKMKLWK--SQRDAKISDSTSIDQLNITAQTIDDRQHDLKERHSSCLSWHKLRR 622

Query: 647  WCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLH 706
            WC FEWFYSAID+PWF+  EFVEYLNHVGLGHIPRLTRVEWGVIRSSLG+PRR S +FL 
Sbjct: 623  WCIFEWFYSAIDFPWFAKCEFVEYLNHVGLGHIPRLTRVEWGVIRSSLGRPRRFSAQFLK 682

Query: 707  DEREKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTI 738
            +E++KL QYRES                            RVIAIHPKTRE+HDGSVLT+
Sbjct: 683  EEKQKLNQYRESVRKHYAELRAGTREGLPTDLARPLSVGQRVIAIHPKTREIHDGSVLTV 742

Query: 739  DHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISADKFSAISKELQVNG-- 795
            D+ +CRVQFDRPELGVEFVMDI+ MP NP++NMP  L R  ++ DK      E+++NG  
Sbjct: 743  DYSRCRVQFDRPELGVEFVMDIECMPLNPVENMPANLSRHGVTLDKIFGNLNEVKINGLL 802

Query: 796  -HPNFGSPMLFASDGHLEKAP----ILPNT-----LQKQAKGDMNHALPQAKSLATDIVS 845
                    M   S+  LE       I P+T     L KQAK D+  +  QAK   ++ V 
Sbjct: 803  KEAKIEDYMKSTSNDKLESTEGSVYISPSTHHINKLIKQAKVDLGCSNLQAKFGLSETVG 862

Query: 846  AQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSL 897
             QQ    Q   + QIQA+EA V ALSE        E ++ ELK  N+++LE+Q  G++ L
Sbjct: 863  IQQETSSQPSALAQIQAKEADVHALSELSRALDKKEVVVSELKRLNDEVLENQINGDNLL 922

Query: 898  KDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQAS 957
            KDSE  KK  A VL+QL E N+                                   Q S
Sbjct: 923  KDSENFKKQYAAVLLQLNEVNE-----------------------------------QVS 947

Query: 958  SALLQVRQCNTHPESSRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDA 1017
            SAL  +RQ NT+ + + P   + P +      SH SQE GS VAEIV  SR KA TM+D 
Sbjct: 948  SALYCLRQRNTY-QGTSPLMFLKPVHDSGDPCSH-SQEPGSHVAEIVGSSRAKAQTMIDE 1005

Query: 1018 AVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS--PEQVNGSLGHHNHFVSG 1075
            A++A+ ++K+GE     I EA+D +  R    D  +  +RS   +  N +    NHF + 
Sbjct: 1006 AMQAILALKKGESNLENIEEAIDFVSNRLTVDDLALPTVRSAAADTSNAAPVSQNHFNAC 1065

Query: 1076 TCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT-PADVAQIIDS 1134
            T +    +   G K    SDK E +IPSELI  CVATLLMIQ CTER   P+DVAQ++DS
Sbjct: 1066 TSNTSTASFVVGPKSNGSSDKTEMEIPSELIAHCVATLLMIQKCTERQFPPSDVAQVLDS 1125

Query: 1135 AVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            AVSSL PCCPQNLP+Y EI+ CMG I++QILALIPT
Sbjct: 1126 AVSSLQPCCPQNLPLYAEIQKCMGIIRSQILALIPT 1161


>gi|50540713|gb|AAT77870.1| expressed protein [Oryza sativa Japonica Group]
          Length = 1251

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1238 (43%), Positives = 723/1238 (58%), Gaps = 156/1238 (12%)

Query: 6    KSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYRNYGKD 62
            K R+VNKRYA  NE    KD  +  KSK +KKKLSD LG QWSK EL+RFY +YR YGKD
Sbjct: 94   KVRNVNKRYAKINEDWQDKDATNVHKSKVRKKKLSDMLGSQWSKDELERFYGSYRKYGKD 153

Query: 63   WKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESN 122
            W+KVA+ +R+R++EMVEALYNMN+AYLSLPEGTA+  GLIAMMTDHYN+++GS+S+ ESN
Sbjct: 154  WRKVASSIRDRTSEMVEALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNSDHESN 213

Query: 123  DASEMPRKSQKRKRAKVQLSASKEDIS-----QSWSMAATGGCLSLLKRSRIDGNQPRAV 177
             + +  RK +KR RAK Q  +   D       QS   +++ GCLSLLK+ R  GN+PRAV
Sbjct: 214  GSPKTSRKPRKRGRAKFQSVSKASDTQHPDQLQSQPASSSYGCLSLLKKKRSGGNKPRAV 273

Query: 178  KKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAN-DDEVAHVAALALTEASQRGGSPQ 236
             KRTPR PV+   ++D++     +   +R++  D N DDE AHVAALAL E  QRGGSPQ
Sbjct: 274  GKRTPRVPVASMYQRDEK-----IGPTNRQAKPDGNGDDEGAHVAALALAEVFQRGGSPQ 328

Query: 237  VSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTR 296
             SQ+P +  +    SPV+  D+    +E           +   PE  + +R  E G Y +
Sbjct: 329  DSQTPGRSGDRMFLSPVKSTDRKNADSEMGSSKLHGFQVDADFPEGSLGSREAETGDYPK 388

Query: 297  ARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVG 356
                LM+ EG  + +  +K K+  R++ K     +   +D+ EACSGTEEG S++K K  
Sbjct: 389  YASYLMNNEGSASGKSQQKVKRTQRRRKKAARKTDDQLEDDREACSGTEEGHSAKKTKDE 448

Query: 357  SEISN-AKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLPDSTMESESSVQ 413
            SE++   +    P +   KR+++LFFGDES+AL+AL TLADLS  ++ P S +ESESS Q
Sbjct: 449  SEVNGLGRKGRWPSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESESSAQ 508

Query: 414  LKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSG 473
            +K+E    D D+K S P   S    K+K K    K K  + +  A+    +K+++ +   
Sbjct: 509  IKDENKDNDSDEKPSMPAAVSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIAKVPN 568

Query: 474  NDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFA 533
             D   ++E K+        +++K++   + KIS  E        + +E   V+ E  K +
Sbjct: 569  RDGIAISETKQLDSKFGVQTEKKKRKPSAAKISKDE----KSALKDVEKTEVSAEEGKVS 624

Query: 534  SKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRR 593
            S     + ++ Q                          A T QA +AS      K +SRR
Sbjct: 625  SNKAMDTVDTTQG-------------------------ATTQQADLAS------KGRSRR 653

Query: 594  KMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWF 653
            K+ + + L+  E + ++ +   + +K S +  + ++ +K+ LS CLSS ++RRWCTFEWF
Sbjct: 654  KIGILKALAP-ECRPTDGADDLRSDKFSYAVNN-VIDLKDSLSHCLSSRLLRRWCTFEWF 711

Query: 654  YSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLK 713
            YSAID+PWF   EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKPRRLSK+FL +EREKL 
Sbjct: 712  YSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEEREKLA 771

Query: 714  QYRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRV 745
            QYRES                            RVIA HP+TRELHDG+VL +DH++CRV
Sbjct: 772  QYRESVRQHYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHNRCRV 831

Query: 746  QFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ---------ISADKFSAISKELQVNGH 796
            QFDRPELGVEFVMDID MP +PL+N PE+LRRQ          S  KF   SKEL   G 
Sbjct: 832  QFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELGTGGP 891

Query: 797  PNFGSPMLF----ASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSA-QQAAY 851
              F S + F    A+       PI  NTL KQAKGD   ++ QAK    ++  A QQ+ Y
Sbjct: 892  TRFTSNVCFDGGDATSNIPSNYPI--NTLMKQAKGDTVDSIAQAKVAVNEVAVAAQQSMY 949

Query: 852  GQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPL 903
             Q CT+ QIQ REA +RAL+E        EALL+EL++ N ++   Q  GE+  +D E  
Sbjct: 950  SQPCTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVYGRQKDGEA-FRDFEHF 1008

Query: 904  KKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQV 963
            +K  A VLVQL+++ND                                     +SALL +
Sbjct: 1009 RKQYAMVLVQLRDSNDHV-----------------------------------ASALLSL 1033

Query: 964  RQCNT---HPESSRPSWPMHPANVKMLDN-----SHVSQESGSAVAEIVNGSRLKAHTMV 1015
            RQ NT   HP  S P  PM    +    +      +++QESGS V E++  SR +A  MV
Sbjct: 1034 RQRNTYHGHPAQSYPK-PMENGALTGTPDLYNLFGYINQESGSQVMEVIETSRSRAKLMV 1092

Query: 1016 DAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS--PEQVNGSLGHHNHFV 1073
            D A++AM SV EGEDAY K+GEALD+++ R   S   +  IR   P+    +  H ++  
Sbjct: 1093 DVAIQAMCSVSEGEDAYAKVGEALDNLNNRSTGSGSSILGIRRIPPDSGQANSSHQDNTT 1152

Query: 1074 SGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQII 1132
            SG  DP  TNN S  +L +  D +E Q PSELI+SCVAT+LMIQ CTE+ + PA+VA I+
Sbjct: 1153 SGHFDP-ATNNISSPRLPNGCD-SEPQFPSELISSCVATILMIQNCTEKQYHPAEVAHIL 1210

Query: 1133 DSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            DSA+S L PC  QN+ I+REIEMCMG IK Q+LALIPT
Sbjct: 1211 DSALSRLQPCSSQNVTIFREIEMCMGIIKNQMLALIPT 1248


>gi|108710016|gb|ABF97811.1| DIRP family protein, expressed [Oryza sativa Japonica Group]
          Length = 1255

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1242 (43%), Positives = 723/1242 (58%), Gaps = 160/1242 (12%)

Query: 6    KSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYRNYGKD 62
            K R+VNKRYA  NE    KD  +  KSK +KKKLSD LG QWSK EL+RFY +YR YGKD
Sbjct: 94   KVRNVNKRYAKINEDWQDKDATNVHKSKVRKKKLSDMLGSQWSKDELERFYGSYRKYGKD 153

Query: 63   WKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESN 122
            W+KVA+ +R+R++EMVEALYNMN+AYLSLPEGTA+  GLIAMMTDHYN+++GS+S+ ESN
Sbjct: 154  WRKVASSIRDRTSEMVEALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNSDHESN 213

Query: 123  DASEMPRKSQKRKRAKVQLSASKEDIS-----QSWSMAATGGCLSLLKRSR----IDGNQ 173
             + +  RK +KR RAK Q  +   D       QS   +++ GCLSLLK+ R      GN+
Sbjct: 214  GSPKTSRKPRKRGRAKFQSVSKASDTQHPDQLQSQPASSSYGCLSLLKKKRSGDLFVGNK 273

Query: 174  PRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAN-DDEVAHVAALALTEASQRG 232
            PRAV KRTPR PV+   ++D++     +   +R++  D N DDE AHVAALAL E  QRG
Sbjct: 274  PRAVGKRTPRVPVASMYQRDEK-----IGPTNRQAKPDGNGDDEGAHVAALALAEVFQRG 328

Query: 233  GSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENG 292
            GSPQ SQ+P +  +    SPV+  D+    +E           +   PE  + +R  E G
Sbjct: 329  GSPQDSQTPGRSGDRMFLSPVKSTDRKNADSEMGSSKLHGFQVDADFPEGSLGSREAETG 388

Query: 293  AYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRK 352
             Y +    LM+ EG  + +  +K K+  R++ K     +   +D+ EACSGTEEG S++K
Sbjct: 389  DYPKYASYLMNNEGSASGKSQQKVKRTQRRRKKAARKTDDQLEDDREACSGTEEGHSAKK 448

Query: 353  GKVGSEISN-AKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLPDSTMESE 409
             K  SE++   +    P +   KR+++LFFGDES+AL+AL TLADLS  ++ P S +ESE
Sbjct: 449  TKDESEVNGLGRKGRWPSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESE 508

Query: 410  SSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLG 469
            SS Q+K+E    D D+K S P   S    K+K K    K K  + +  A+    +K+++ 
Sbjct: 509  SSAQIKDENKDNDSDEKPSMPAAVSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIA 568

Query: 470  RYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEH 529
            +    D   ++E K+        +++K++   + KIS  E        + +E   V+ E 
Sbjct: 569  KVPNRDGIAISETKQLDSKFGVQTEKKKRKPSAAKISKDEKSA----LKDVEKTEVSAEE 624

Query: 530  NKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKH 589
             K +S     + ++ Q                          A T QA +AS      K 
Sbjct: 625  GKVSSNKAMDTVDTTQG-------------------------ATTQQADLAS------KG 653

Query: 590  QSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
            +SRRK+ + + L+  E + ++ +   + +K S +  + ++ +K+ LS CLSS ++RRWCT
Sbjct: 654  RSRRKIGILKALAP-ECRPTDGADDLRSDKFSYAVNN-VIDLKDSLSHCLSSRLLRRWCT 711

Query: 650  FEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDER 709
            FEWFYSAID+PWF   EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKPRRLSK+FL +ER
Sbjct: 712  FEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEER 771

Query: 710  EKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHD 741
            EKL QYRES                            RVIA HP+TRELHDG+VL +DH+
Sbjct: 772  EKLAQYRESVRQHYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHN 831

Query: 742  KCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ---------ISADKFSAISKELQ 792
            +CRVQFDRPELGVEFVMDID MP +PL+N PE+LRRQ          S  KF   SKEL 
Sbjct: 832  RCRVQFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELG 891

Query: 793  VNGHPNFGSPMLF----ASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSA-Q 847
              G   F S + F    A+       PI  NTL KQAKGD   ++ QAK    ++  A Q
Sbjct: 892  TGGPTRFTSNVCFDGGDATSNIPSNYPI--NTLMKQAKGDTVDSIAQAKVAVNEVAVAAQ 949

Query: 848  QAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKD 899
            Q+ Y Q CT+ QIQ REA +RAL+E        EALL+EL++ N ++   Q  GE+  +D
Sbjct: 950  QSMYSQPCTLSQIQEREADIRALAELSRALDKKEALLVELRHMNEEVYGRQKDGEA-FRD 1008

Query: 900  SEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSA 959
             E  +K  A VLVQL+++ND                                     +SA
Sbjct: 1009 FEHFRKQYAMVLVQLRDSNDHV-----------------------------------ASA 1033

Query: 960  LLQVRQCNT---HPESSRPSWPMHPANVKMLDN-----SHVSQESGSAVAEIVNGSRLKA 1011
            LL +RQ NT   HP  S P  PM    +    +      +++QESGS V E++  SR +A
Sbjct: 1034 LLSLRQRNTYHGHPAQSYPK-PMENGALTGTPDLYNLFGYINQESGSQVMEVIETSRSRA 1092

Query: 1012 HTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS--PEQVNGSLGHH 1069
              MVD A++AM SV EGEDAY K+GEALD+++ R   S   +  IR   P+    +  H 
Sbjct: 1093 KLMVDVAIQAMCSVSEGEDAYAKVGEALDNLNNRSTGSGSSILGIRRIPPDSGQANSSHQ 1152

Query: 1070 NHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADV 1128
            ++  SG  DP  TNN S  +L +  D +E Q PSELI+SCVAT+LMIQ CTE+ + PA+V
Sbjct: 1153 DNTTSGHFDP-ATNNISSPRLPNGCD-SEPQFPSELISSCVATILMIQNCTEKQYHPAEV 1210

Query: 1129 AQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            A I+DSA+S L PC  QN+ I+REIEMCMG IK Q+LALIPT
Sbjct: 1211 AHILDSALSRLQPCSSQNVTIFREIEMCMGIIKNQMLALIPT 1252


>gi|108710017|gb|ABF97812.1| DIRP family protein, expressed [Oryza sativa Japonica Group]
          Length = 1246

 Score =  839 bits (2167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/1241 (42%), Positives = 716/1241 (57%), Gaps = 167/1241 (13%)

Query: 6    KSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYRNYGKD 62
            K R+VNKRYA  NE    KD  +  KSK +KKKLSD LG QWSK EL+RFY +YR YGKD
Sbjct: 94   KVRNVNKRYAKINEDWQDKDATNVHKSKVRKKKLSDMLGSQWSKDELERFYGSYRKYGKD 153

Query: 63   WKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESN 122
            W+KVA+ +R+R++EMVEALYNMN+AYLSLPEGTA+  GLIAMMTDHYN+++GS+S+ ESN
Sbjct: 154  WRKVASSIRDRTSEMVEALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNSDHESN 213

Query: 123  DASEMPRKSQKRKRAKVQLSASKEDIS-----QSWSMAATGGCLSLLKRSR----IDGNQ 173
             + +  RK +KR RAK Q  +   D       QS   +++ GCLSLLK+ R      GN+
Sbjct: 214  GSPKTSRKPRKRGRAKFQSVSKASDTQHPDQLQSQPASSSYGCLSLLKKKRSGDLFVGNK 273

Query: 174  PRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAN-DDEVAHVAALALTEASQRG 232
            PRAV KRTPR PV+   ++D++     +   +R++  D N DDE AHVAALAL E  QRG
Sbjct: 274  PRAVGKRTPRVPVASMYQRDEK-----IGPTNRQAKPDGNGDDEGAHVAALALAEVFQRG 328

Query: 233  GSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENG 292
            GSPQ SQ+P +  +    SPV+  D+    +E           +   PE  + +R  E G
Sbjct: 329  GSPQDSQTPGRSGDRMFLSPVKSTDRKNADSEMGSSKLHGFQVDADFPEGSLGSREAETG 388

Query: 293  AYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRK 352
             Y +    LM+ EG  + +  +K K+  R++ K     +   +D+ EACSGTEEG S++K
Sbjct: 389  DYPKYASYLMNNEGSASGKSQQKVKRTQRRRKKAARKTDDQLEDDREACSGTEEGHSAKK 448

Query: 353  GKVGSEISN-AKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLPDSTMESE 409
             K  SE++   +    P +   KR+++LFFGDES+AL+AL TLADLS  ++ P S +ESE
Sbjct: 449  TKDESEVNGLGRKGRWPSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESE 508

Query: 410  SSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLG 469
            SS Q+K+E    D D+K S P   S    K+K K    K K  + +  A+    +K+++ 
Sbjct: 509  SSAQIKDENKDNDSDEKPSMPAAVSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIA 568

Query: 470  RYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEH 529
            +    D   ++E K+        +++K++   + KIS  E        + +E   V+ E 
Sbjct: 569  KVPNRDGIAISETKQLDSKFGVQTEKKKRKPSAAKISKDEKSA----LKDVEKTEVSAEE 624

Query: 530  NKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKH 589
             K +S     + ++ Q                          A T QA +AS      K 
Sbjct: 625  GKVSSNKAMDTVDTTQG-------------------------ATTQQADLAS------KG 653

Query: 590  QSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
            +SRRK+ + + L+  E + ++ +   + +K S +  + ++ +K+ LS CLSS ++RRWCT
Sbjct: 654  RSRRKIGILKALAP-ECRPTDGADDLRSDKFSYAVNN-VIDLKDSLSHCLSSRLLRRWCT 711

Query: 650  FEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDER 709
            FEWFYSAID+PWF   EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKPRRLSK+FL +ER
Sbjct: 712  FEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEER 771

Query: 710  EKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHD 741
            EKL QYRES                            RVIA HP+TRELHDG+VL +DH+
Sbjct: 772  EKLAQYRESVRQHYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHN 831

Query: 742  KCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ---------ISADKFSAISKELQ 792
            +CRVQFDRPELGVEFVMDID MP +PL+N PE+LRRQ          S  KF   SKEL 
Sbjct: 832  RCRVQFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELG 891

Query: 793  VNGHPNFGSPMLF----ASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQ 848
              G   F S + F    A+       PI  NTL KQAK           ++    V+AQQ
Sbjct: 892  TGGPTRFTSNVCFDGGDATSNIPSNYPI--NTLMKQAK--------AKVAVNEVAVAAQQ 941

Query: 849  AAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDS 900
            + Y Q CT+ QIQ REA +RAL+E          LL+EL++ N ++   Q  GE+  +D 
Sbjct: 942  SMYSQPCTLSQIQEREADIRALAELSRALDKKATLLVELRHMNEEVYGRQKDGEA-FRDF 1000

Query: 901  EPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSAL 960
            E  +K  A VLVQL+++ND                                     +SAL
Sbjct: 1001 EHFRKQYAMVLVQLRDSNDHV-----------------------------------ASAL 1025

Query: 961  LQVRQCNT---HPESSRPSWPMHPANVKMLDN-----SHVSQESGSAVAEIVNGSRLKAH 1012
            L +RQ NT   HP  S P  PM    +    +      +++QESGS V E++  SR +A 
Sbjct: 1026 LSLRQRNTYHGHPAQSYPK-PMENGALTGTPDLYNLFGYINQESGSQVMEVIETSRSRAK 1084

Query: 1013 TMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS--PEQVNGSLGHHN 1070
             MVD A++AM SV EGEDAY K+GEALD+++ R   S   +  IR   P+    +  H +
Sbjct: 1085 LMVDVAIQAMCSVSEGEDAYAKVGEALDNLNNRSTGSGSSILGIRRIPPDSGQANSSHQD 1144

Query: 1071 HFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVA 1129
            +  SG  DP  TNN S  +L +  D +E Q PSELI+SCVAT+LMIQ CTE+ + PA+VA
Sbjct: 1145 NTTSGHFDP-ATNNISSPRLPNGCD-SEPQFPSELISSCVATILMIQNCTEKQYHPAEVA 1202

Query: 1130 QIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
             I+DSA+S L PC  QN+ I+REIEMCMG IK Q+LALIPT
Sbjct: 1203 HILDSALSRLQPCSSQNVTIFREIEMCMGIIKNQMLALIPT 1243


>gi|255542652|ref|XP_002512389.1| always early, putative [Ricinus communis]
 gi|223548350|gb|EEF49841.1| always early, putative [Ricinus communis]
          Length = 1025

 Score =  837 bits (2162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/860 (54%), Positives = 577/860 (67%), Gaps = 86/860 (10%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQ----KKKLSDKLGPQWSKGELQRFYEAY 56
           M P RK +SVNKR  N+VSP K V +  K+K+    K++L+DKLGP+WS+ ELQRFY+AY
Sbjct: 1   MPPARK-KSVNKRSLNDVSPGKAVKNSIKNKEQATGKRRLTDKLGPRWSEAELQRFYKAY 59

Query: 57  RNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSD 116
           R +G DWKKVAA+V NRS EMV ALY MN+AYLSLPEGTASVVGLIAMMTDHY+ +E SD
Sbjct: 60  RVHGVDWKKVAAEVANRSVEMVHALYKMNKAYLSLPEGTASVVGLIAMMTDHYSTLEVSD 119

Query: 117 SERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRA 176
           SE ESND   M R+ QK KRAKVQ+SASKE + QS S+A+T G LSLLK+   +G+QPRA
Sbjct: 120 SEGESNDVPGMIRRPQKCKRAKVQVSASKEVLLQSHSIASTDGYLSLLKKGTFNGDQPRA 179

Query: 177 VKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQ 236
           V KRTPR  +S       R+++  L KKD++S  D NDDEVAHVAALALTEA QRG SPQ
Sbjct: 180 VGKRTPRVAIS-------RENFESLKKKDQKSENDDNDDEVAHVAALALTEALQRGSSPQ 232

Query: 237 VSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTR 296
           VS++PH++TE  +SS V+ WDKM   +++ H    +   +E   E     R   +G Y R
Sbjct: 233 VSRTPHRRTERIESSSVRGWDKM---SKSFHMKLHDTSADEEWIECHT-RRGAHSGTYAR 288

Query: 297 ARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGK 354
              SL DMEG+GTVEVHRKGKKFY  K+KVEE+ N  SDD GEACSGTEEG  ++  KGK
Sbjct: 289 DTSSLADMEGMGTVEVHRKGKKFYGHKVKVEEILNCQSDDGGEACSGTEEGPKVNGIKGK 348

Query: 355 VGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQL 414
           V  E  N K D    Q+++KR  K F GDE +AL+AL+TLA LS+M      ESESSVQL
Sbjct: 349 VDIEELNVKIDKSSPQVRKKRRDKHFSGDEFSALDALRTLASLSVM------ESESSVQL 402

Query: 415 KEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGN 474
            EER A ++DDK S PE TST H K++ K L   +K L+ + E ED   R +KLGR++  
Sbjct: 403 NEERPAVNMDDKCSIPETTSTIHCKDRAKPLRRNQKVLHGLGEVEDTTSRNAKLGRHTTA 462

Query: 475 DVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFAS 534
             + V+   ++P+  ++ +K++++S++SK +   E ++      TL              
Sbjct: 463 YAKPVSVANKRPQSISNNTKKRKRSLISKTVDEEEIIS------TL-------------- 502

Query: 535 KGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRK 594
           KGK T Q SA S+Q K   V  GS   D+  ++ D+   T Q PVAS  + PT+  SRRK
Sbjct: 503 KGKLTCQASAVSEQAKAVGVSVGSFSGDRASSANDVAISTEQVPVASQVTLPTRKTSRRK 562

Query: 595 MDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFY 654
            DLKR  + K+   SEN LKT+ N+ S+S +D +L  KEKLS CLSS MVRRWCTFEWFY
Sbjct: 563 RDLKRAFNPKDGYSSENILKTRVNRYSISGKDAVLHFKEKLSSCLSSPMVRRWCTFEWFY 622

Query: 655 SAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQ 714
           SAIDYPWF+ REFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRR S+ FL +EREKLKQ
Sbjct: 623 SAIDYPWFAKREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRFSEHFLTEEREKLKQ 682

Query: 715 YRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQ 746
           YR+S                            RVIA+HPKTREL+DGSVLT+DHD+CR+Q
Sbjct: 683 YRDSVRKHYTELSTGIREGLPTDLAKPLSVGERVIALHPKTRELYDGSVLTVDHDRCRIQ 742

Query: 747 FDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFA 806
           FD PE+GVEFV DID MP NP DNMPEALRR+     F+ ISKELQVNGHP         
Sbjct: 743 FDCPEVGVEFVKDIDCMPLNPYDNMPEALRRRT----FAFISKELQVNGHPT-------- 790

Query: 807 SDGHLEKAPILPNTLQKQAK 826
              HLE      N L KQ +
Sbjct: 791 --RHLENLQTPANMLVKQVQ 808



 Score =  260 bits (664), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 130/180 (72%), Positives = 146/180 (81%), Gaps = 1/180 (0%)

Query: 992  VSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDP 1051
            VSQESGS V EIV GSR KAHTM+DAAV+A+SSVKEGEDA+ KI EALD IDKRQ+ S+ 
Sbjct: 846  VSQESGSTVVEIVRGSRKKAHTMIDAAVQAISSVKEGEDAFVKIEEALDSIDKRQVGSES 905

Query: 1052 RVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVA 1111
            ++ VIRS EQ N  L H+N  +S T + Q   NA   K  D S+K EA IPSELITSCVA
Sbjct: 906  KLQVIRSSEQGNSILLHNNQLISSTSELQVITNACAPKSHDNSEKTEAVIPSELITSCVA 965

Query: 1112 TLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
             LLMIQTCTER + PADVAQ+IDSAV+SLHPCCPQNLPIYREI+MCMGRIKTQILALIPT
Sbjct: 966  ALLMIQTCTERQYPPADVAQLIDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1025


>gi|357143489|ref|XP_003572939.1| PREDICTED: protein ALWAYS EARLY 2-like [Brachypodium distachyon]
          Length = 1165

 Score =  837 bits (2162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/1233 (44%), Positives = 721/1233 (58%), Gaps = 134/1233 (10%)

Query: 1    MAPTRKSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYR 57
            M+ TRK R+VNKRYA  NE    K+  +  KSK +KKKLSD LG QWSK EL+RFY AYR
Sbjct: 1    MSSTRKVRNVNKRYAKINEDWQDKEATTVHKSKVRKKKLSD-LGSQWSKDELERFYGAYR 59

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             YGKDWKKVA  V +R+++MVEALYNMNRAYLSLPEGTA+  GLIAMMTDHYN+++GS+S
Sbjct: 60   KYGKDWKKVAGAVHDRTSDMVEALYNMNRAYLSLPEGTATAAGLIAMMTDHYNILDGSNS 119

Query: 118  ERESNDASEMPRKSQKRKRAKVQLSASKE------DISQSWSMAATGGCLSLLKRSRIDG 171
            + ESN++ +  RK QKR RAK+Q S SK       D+ QS   ++  GCLSLLK+ R  G
Sbjct: 120  DHESNESPKTSRKPQKRGRAKLQ-SVSKTSDTRYADLLQSQPSSSNYGCLSLLKKKRSGG 178

Query: 172  NQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAN--DDEVAHVAALALTEAS 229
            N+PRAV KRTPR PV+    +DDR     +   +R+S  DAN  DDE A VAALAL E  
Sbjct: 179  NRPRAVGKRTPRVPVASMYHRDDR-----IGPSNRQSKPDANNGDDEGARVAALALAEVG 233

Query: 230  QRGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRP 289
            QRG SPQ+SQ+P + ++    SPV+  D+    ++           +   PE  + +R  
Sbjct: 234  QRGSSPQISQTPGRSSDRLFLSPVKSIDRKNADSDIGSSKLHGFQVDADYPEGSLGSREA 293

Query: 290  ENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLS 349
            E G Y +     M+  G  + +  +K KK  R+K K  +  +   +D+ EACSGTEEG S
Sbjct: 294  ETGDYPKDASYFMNNGGSASGKSKQKIKKSQRRKKKAAQKSDDQFEDDREACSGTEEGHS 353

Query: 350  SRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLPDSTME 407
            +RK K  SE+ +A     P     KRS++LFF DES+AL+AL TLADLS  ++ P S  E
Sbjct: 354  ARKAKDESEV-DAVGTSWPSNKSNKRSRQLFFDDESSALDALYTLADLSVNILQPSSIAE 412

Query: 408  SESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSK 467
            SESS  +K+E    D DDK S P   S S  KEK + +  K K  + I   E +  +K++
Sbjct: 413  SESSAHIKDESRDNDFDDKPSVPAALSLSEKKEKSRKM-KKVKRQSEIAGNEMVTRKKAR 471

Query: 468  LGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAE 527
            L +   +D   ++EVK+Q +      K+KRKS   K I    +  + +    +E   V+ 
Sbjct: 472  LSKDPHHDEGAISEVKQQ-DCNVQKEKKKRKSATGKVIPKLFSKDEKNTMNDIEKTEVSA 530

Query: 528  EHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPT 587
            E  K +S   R ++ S  SKQ K        +  D  + ++D+V  T Q      +   +
Sbjct: 531  EEGKVSSNKGRHARVSPVSKQNKSKAQESSPAHADSGKEAMDIVETT-QNATTQQSDLTS 589

Query: 588  KHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRW 647
            K +SRRK+ + + L+  E K +E +  +  N +     + ++ +K+KLS CLSS  +RRW
Sbjct: 590  KARSRRKLGILKALAP-ECKPAEGTDGSHDNVSY--PVNNVIDLKDKLSHCLSSRFLRRW 646

Query: 648  CTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHD 707
            CT+EWFYSAIDYPWF+  EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKPRRLSK+FLH+
Sbjct: 647  CTYEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLHE 706

Query: 708  EREKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTID 739
            EREKL +YR S                            RVIA HPKT ELH+GSVLT+D
Sbjct: 707  EREKLFKYRHSVRQHYDELRSGVREGLPTDLARPLAVGQRVIACHPKTGELHEGSVLTVD 766

Query: 740  HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHP-- 797
            + +CRV FDRPELGVEFVMDID MP +PL+N PE+LRRQ   +K+ +   E++       
Sbjct: 767  YHRCRVNFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNIVNKYYSSFSEVKFEDRSRE 826

Query: 798  -NFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCT 856
               G    FAS+G         +T    AK  +N              +AQQA Y Q CT
Sbjct: 827  YGGGGVARFASNG---------DTFDTHAKATVNEVTG----------AAQQAMYSQPCT 867

Query: 857  VPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIA 908
            + QIQ REA ++AL+E        EALL+EL++ N ++   Q  GE+ + + E  +K  A
Sbjct: 868  LSQIQEREADIKALAELSRSLDKKEALLVELRHMNEEVSAKQKDGET-ISELEHFRKQYA 926

Query: 909  TVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNT 968
             VLVQL+++ND                                     +SALL +RQ NT
Sbjct: 927  MVLVQLRDSNDHV-----------------------------------ASALLSLRQRNT 951

Query: 969  HPESSRPSWPMHPANVKMLDN--------SHVSQESGSAVAEIVNGSRLKAHTMVDAAVK 1020
              E    S+P    N   L+          +++QESGS V EI+  SR +A TMVD A++
Sbjct: 952  FHEHPLQSYPKSTDNGGALNGKLEPFNHFGYINQESGSQVMEIIETSRCRAKTMVDVAIQ 1011

Query: 1021 AMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS--PEQVNGSLGHHNHFVSGTCD 1078
            AM  V EGE+A+ KIGEALD++  R   S   +  IR   P+    +    ++  SG  D
Sbjct: 1012 AMCKVSEGENAFAKIGEALDNLSIRGTGSGSSILGIRRIPPDSGQANSTCQDNSTSGRFD 1071

Query: 1079 PQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT-PADVAQIIDSAVS 1137
            P  TN +S  +L +  D +EAQ PSELI+SCVAT+LMIQ CTE+   PA+VA I+DSA+S
Sbjct: 1072 PATTNTSS-PRLSNGYD-SEAQFPSELISSCVATVLMIQNCTEKQCHPAEVAHILDSALS 1129

Query: 1138 SLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
             L PC  QN+PI+REIEMCMG IK Q+LALIPT
Sbjct: 1130 RLQPCSSQNVPIFREIEMCMGIIKNQMLALIPT 1162


>gi|242040857|ref|XP_002467823.1| hypothetical protein SORBIDRAFT_01g034706 [Sorghum bicolor]
 gi|241921677|gb|EER94821.1| hypothetical protein SORBIDRAFT_01g034706 [Sorghum bicolor]
          Length = 1145

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/1244 (42%), Positives = 710/1244 (57%), Gaps = 177/1244 (14%)

Query: 1    MAPTRKSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYR 57
            MA  RK R+ NKRYA  NE    KD  S  KSK +KKKLSD LG QWSK EL+RFY AYR
Sbjct: 1    MASARKVRNTNKRYAKINEDWQDKDTTSVPKSKVRKKKLSDMLGSQWSKDELERFYGAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             YGKDW+KVA  +R+R+++MV+ALYNMN+AYLSLPEGTA+  GLIAMMTDHYN+++GS+S
Sbjct: 61   KYGKDWRKVAGAIRDRTSDMVKALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNS 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLSASKE------DISQSWSMAATGGCLSLLKRSR--- 168
            +RESND+ ++ R+ QKR RAK+Q S SK       D+ Q    +++ GCLSLLK+ R   
Sbjct: 121  DRESNDSPKVSRRLQKRGRAKLQ-SVSKTSDTHYTDLLQPQPASSSYGCLSLLKKKRSGD 179

Query: 169  -IDGNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAN--DDEVAHVAALAL 225
               GN+PRAV KRTPR PV+    +DDR         +R++  DAN  DDE AHVAALAL
Sbjct: 180  LFVGNRPRAVGKRTPRVPVASMYHRDDR------GASNRQAKPDANNGDDEGAHVAALAL 233

Query: 226  TEASQRGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARIL 285
             E  QRGGSPQVS +P +  +H   SP +  DK    +E           +   PE  + 
Sbjct: 234  AEVYQRGGSPQVSHTPRRSGDHMFLSPAKSSDKKNADSEMGSSKLHGFQLDADYPEGSLG 293

Query: 286  NRRPENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTE 345
            +R  E G YT+    L+  +G  + +  +K K+  +++ KV        +D+ EACSGTE
Sbjct: 294  SREAETGDYTKGASYLIANKGSPSSKPQKKVKRPQKRRKKVVRKTGDQFEDDREACSGTE 353

Query: 346  EGLSSRKGKVGSEISN-AKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLP 402
            EG S +K K   E+         P     KRS++LFF DE +AL+AL TLADLS  ++ P
Sbjct: 354  EGRSMKKAKEEPELETLGSKTAWPSSTSNKRSRQLFFDDERSALDALHTLADLSVNILQP 413

Query: 403  DSTMESESSVQLKEERTAFDIDDKSSAPEE-TSTSHPKEKIKHLGPKEKALNTITEAEDI 461
               +ESESS Q+K+E    D D K   P    S    K+  K    K K  + +   + +
Sbjct: 414  SPVVESESSAQIKDENKDNDSDGKPGIPAAAVSVYEQKDNSKSTSKKLKRQSEMASTDMV 473

Query: 462  IPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLE 521
              +K KL + + +D  T +EVK+Q       +++K+KS + K +       + +M + +E
Sbjct: 474  TRKKVKLAKDTNHDGSTTSEVKQQACTCGVKTEKKKKSSMGKILKE-----EKNMPKDVE 528

Query: 522  SEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVAS 581
               V+ E  K +S                                ++D+   T Q     
Sbjct: 529  KTEVSPEEEKASSN------------------------------KTMDIAETTTQVATTP 558

Query: 582  PASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSS 641
             A    K +SRRK+ +++ L+ +E K +E +  +  +K S S  + ++ +K+KLS CLSS
Sbjct: 559  QADLIAKGKSRRKLGIQKSLT-QECKPAEGAGDSGSDKLSYSLSN-IIDLKDKLSHCLSS 616

Query: 642  NMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLS 701
             ++RRWC FEWFYSAIDYPWF+  EF+EYLNHV LGH+PRLTRVEWGVIRSSLGKPRRLS
Sbjct: 617  RLLRRWCMFEWFYSAIDYPWFAKSEFIEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLS 676

Query: 702  KRFLHDEREKLKQYRES----------------------------RVIAIHPKTRELHDG 733
            K+FLH+EREKL QYR+S                            RVIA HP+TRELHDG
Sbjct: 677  KQFLHEEREKLAQYRDSVRQHYTELRSGVREGLPTDLARPLAVGQRVIACHPRTRELHDG 736

Query: 734  SVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ---------ISADKF 784
            +VLT+DH++CRVQFDRPELGVE V DID MP +PL+N PE+LR+Q         +S  K+
Sbjct: 737  NVLTVDHNQCRVQFDRPELGVELVKDIDCMPLHPLENFPESLRQQSIFNGYYSHLSEAKY 796

Query: 785  SAISKELQVNGHPNF-----GSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSL 839
                KEL   G         G+   F S GH    P+  +TL KQAK         AK+ 
Sbjct: 797  EDQMKELASGGASRSTLNLNGADAAFPS-GH----PM--STLMKQAK---------AKAT 840

Query: 840  ATDI-VSAQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQ 890
              ++ V+ QQ+ Y Q CT+ QIQ REA +RAL E        EALL+EL++ N ++  +Q
Sbjct: 841  VNEVAVTTQQSMYSQPCTLSQIQEREADIRALGELSRALDKKEALLVELRHMNEEVSGNQ 900

Query: 891  NGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLID 950
              GE  ++D E  +K  A VLVQL+++NDQ                              
Sbjct: 901  RDGEI-IRDLEHFRKQYAMVLVQLRDSNDQV----------------------------- 930

Query: 951  CFDMQASSALLQVRQCNTH---PESSRPSWPMHPANVKMLDN--SHVSQESGSAVAEIVN 1005
                  ++ALL +RQ NT+   P S      +  A      N  S+++ ES S V E++ 
Sbjct: 931  ------AAALLSLRQRNTYHGNPGSKSMENGIAFAGASDPYNLFSYINPESDSQVIEVIE 984

Query: 1006 GSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGS 1065
             S+ +A  MVD A++AM  V EGE+A+ KIGEALDH++ R   S   +  IR   ++   
Sbjct: 985  TSKCRARMMVDVAIQAMCKVSEGENAFAKIGEALDHLNSRGTGSGSSILGIR---RIPPD 1041

Query: 1066 LGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HT 1124
             G  N      C   P  N+S +K+ +  D +E Q P ELI+SCVAT+LMI+ CTE+ + 
Sbjct: 1042 SGQSNASYHDNCTTAPAANSS-SKVPNGCD-SETQFPQELISSCVATMLMIKNCTEKQYH 1099

Query: 1125 PADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALI 1168
            PA+VA I+DSA+SS+ PC  QN+PI+R+IEMCMG IK Q+LA +
Sbjct: 1100 PAEVAHILDSALSSVQPCSSQNVPIFRDIEMCMGIIKNQMLARV 1143


>gi|413919616|gb|AFW59548.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 1151

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1251 (42%), Positives = 711/1251 (56%), Gaps = 184/1251 (14%)

Query: 1    MAPTRKSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYR 57
            MA  RK R+ NKRYA  NE    KD  S  KSK +KKKLSD LG QWSK EL+RFY AYR
Sbjct: 1    MASARKVRNANKRYAKINEDWQDKDTPSVPKSKVRKKKLSDMLGSQWSKDELERFYGAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             YGKDW+KVA  +R+R+++MV+ALYNMN+AYLSLPEGTA+  GLIAMMTDHYN+++GS+S
Sbjct: 61   KYGKDWRKVAGTIRDRTSDMVKALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNS 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLSASKE------DISQSWSMAATGGCLSLLKRSR--- 168
            +RES+D+ +  R+ QKR RAK+Q S SK       D+ Q    +++ GCLSLLK+ R   
Sbjct: 121  DRESSDSPKASRRLQKRGRAKLQ-SVSKTSDTHFTDLLQPQPASSSYGCLSLLKKKRSGD 179

Query: 169  -IDGNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAND--DEVAHVAALAL 225
               GN+PRAV KRTPR PV+    +DDR         +R++  DAND  DE AHVAALAL
Sbjct: 180  LFVGNRPRAVGKRTPRVPVASMYHRDDR------GAPNRQAKPDANDGDDEGAHVAALAL 233

Query: 226  TEASQRGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARIL 285
             E  QRGGSPQ+S +P +  +H   SP +   +    +E           +   PE  + 
Sbjct: 234  AEVHQRGGSPQISHTPRRSGDHMFLSPAKSSGRKNADSEMGSSKLHGFQLDADYPEGSLG 293

Query: 286  NRRPENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTE 345
            +R  E G YT+    L+  +G  + +  +K K+  +++ K     +   +D+ EACSGTE
Sbjct: 294  SREAETGDYTKGTSYLIANKGSPSSKPQKKVKRPQKRRKKAVRRTDDQFEDDREACSGTE 353

Query: 346  EGLSSRKGKVGSEISN-AKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLP 402
            EG S +K K   E+         P     KRS++LFF DES AL+AL TLADLS  ++ P
Sbjct: 354  EGCSMKKAKEEPELETLGTKTAWPSSTSNKRSRQLFFDDESLALDALHTLADLSVNILQP 413

Query: 403  DSTMESESSVQLKEERTAFDIDDKSSAPEE-TSTSHPKEKIKHLGPKEKALNTITEAEDI 461
             S +ESESS Q+K+E+   D D K   P    S    K+  K    K K    +   + +
Sbjct: 414  SSVVESESSAQIKDEKRDNDSDGKPGIPAAAVSVYEQKDNSKSTSKKLKRQPEMASTDMV 473

Query: 462  IPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLE 521
              +K KL + +  D  T +EVK+Q       +++K+KS + K + +     +  M + +E
Sbjct: 474  TRKKGKLAKDTHPDGSTTSEVKQQACTCGVKTEKKKKSSMGKILKD-----EKKMPKDVE 528

Query: 522  SEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVAS 581
               V+ E  K       TS N                        ++D+   T Q     
Sbjct: 529  KTEVSPEEEK-------TSSNK-----------------------TMDIAETTTQVATTL 558

Query: 582  PASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSS 641
             A    K +SRRK+ +++ L+ +E K +E +  +  +K S S  + ++ +K+KLS CLSS
Sbjct: 559  HADLMAKGKSRRKLGIQKSLT-QECKPAEGAGDSGSDKLSYSLSN-IIDLKDKLSHCLSS 616

Query: 642  NMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLS 701
             ++RRWC FEWFYSAIDYPWF+  EFVEYLNHV LGH+PRLT VEWGVIRSSLGKPRRLS
Sbjct: 617  RLLRRWCMFEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTHVEWGVIRSSLGKPRRLS 676

Query: 702  KRFLHDEREKLKQYRES----------------------------RVIAIHPKTRELHDG 733
            K+FLH+EREKL QYR+S                            RVIA HP+TRELHDG
Sbjct: 677  KQFLHEEREKLAQYRDSVRQHYTELLSGVREGLPTDLARPLAVGQRVIACHPRTRELHDG 736

Query: 734  SVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ---------ISADKF 784
            +VLT+DH++CRVQFDRPELGVE V DID MP +PL+N PE+LR Q         +S  K+
Sbjct: 737  NVLTVDHNQCRVQFDRPELGVELVKDIDCMPLHPLENFPESLRHQSAINGYYSHLSEAKY 796

Query: 785  SAISKELQVNG------HPNFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKS 838
                KEL   G      + N      +   GH    P+  +TL KQAK   N A+ +   
Sbjct: 797  EDQMKELASGGAARSTSNLNGTDATFYTPSGH----PM--STLMKQAKA--NTAVNEV-- 846

Query: 839  LATDIVSAQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQ 890
                 V+ QQ+ Y Q CT+ QIQ REA +RAL E        EALL+EL++ N ++   Q
Sbjct: 847  ----AVATQQSMYNQPCTLSQIQEREADIRALGELSRALDKKEALLVELRHMNEEVSGKQ 902

Query: 891  NGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLID 950
              GE  +KD E  +K  A VLVQL+++NDQ                              
Sbjct: 903  KDGEI-IKDLEHFRKQYAMVLVQLRDSNDQV----------------------------- 932

Query: 951  CFDMQASSALLQVRQCNTHPESSRPSWPMH----------PANVKMLDNSHVSQESGSAV 1000
                  ++ALL +RQ NT+  +S  S  M           P N+     S+++ ESGS V
Sbjct: 933  ------AAALLSLRQRNTYHGNSGQSKSMENGIALAGAPDPYNL----FSYINPESGSQV 982

Query: 1001 AEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPE 1060
             E++  S+ +A  MVD A++AM  V EGE+A++KIGEALDH++ R   S   +  IR   
Sbjct: 983  IEVIETSKSRAKMMVDVAIQAMCKVSEGENAFSKIGEALDHLNSRGTGSGSSILGIR--- 1039

Query: 1061 QVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCT 1120
            ++    G  N      C   P  N+S ++L +  D +EAQ P ELI+SCVA +LMI+ CT
Sbjct: 1040 RIPPDSGQSNASYHDDCTAAPAANSS-SRLPNGCD-SEAQFPKELISSCVAMMLMIKNCT 1097

Query: 1121 ER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            E+ + PA+VA I+DSA+SS+ PC  QN+PI+REIEMCMG IK Q+LALIPT
Sbjct: 1098 EKQYHPAEVAHILDSALSSVQPCSSQNIPIFREIEMCMGIIKNQMLALIPT 1148


>gi|255551695|ref|XP_002516893.1| always early, putative [Ricinus communis]
 gi|223543981|gb|EEF45507.1| always early, putative [Ricinus communis]
          Length = 1119

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/1247 (42%), Positives = 706/1247 (56%), Gaps = 205/1247 (16%)

Query: 1    MAPTRKSRSVNKR--YANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYR 57
            MAP+RKSRSVNKR  Y NE +  K   + ++ +Q+K KLSD LGPQWSK EL+RFY AYR
Sbjct: 1    MAPSRKSRSVNKRFSYINEATSNKTGENDNRRRQRKRKLSDMLGPQWSKEELERFYRAYR 60

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
             +GKDW KVAA VR+RS EMVEALY MNRAYL+LP+G AS  GLIAMMTDHY  +E SDS
Sbjct: 61   KHGKDWGKVAAAVRDRSVEMVEALYTMNRAYLNLPKGYASAAGLIAMMTDHYTNLEESDS 120

Query: 118  ERESNDASEMPRKSQKRKRAKVQLSASK-EDISQSWSMAATGGCLSLLKRSRIDGNQPRA 176
            E+E  +    PRK QKR R   +L AS   D+ QS S A+  GCLSLLK+ R  G +P A
Sbjct: 121  EQEITEPVVAPRKPQKRSRGTKELDASPVPDLMQSQSAASNFGCLSLLKKRR-SGGRPWA 179

Query: 177  VKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQ 236
            V KRTPR PVS+S  K     YI   + D +   DA DD+VAH  AL LTEASQR GSPQ
Sbjct: 180  VGKRTPRVPVSFSYDKASGQKYISPIRPDLKLKADALDDDVAHEIALVLTEASQRAGSPQ 239

Query: 237  VSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTR 296
             SQ+P+ K E    S  +  + M   +E      R +  +EG  E  + +   +   Y R
Sbjct: 240  ASQTPNGKAE--TPSLTRNGEHMHVESEMTSSKPRGSEMDEGGCELSLGSTEADMEHYAR 297

Query: 297  ARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGK 354
             ++               KGK ++ +K +VE+  ++ SDD  EACSGTEEG  L + +GK
Sbjct: 298  DKRLT-------------KGKGYHGRKPEVEDNIDNSSDDIKEACSGTEEGQKLGAIRGK 344

Query: 355  VGSEISNAKNDHLPLQMQRKRSKKLFFGD-ESTALNALQTLADLSLMLPDSTMESESSVQ 413
               E+   K      +  RKRSKK+ FG+ E+ A++ALQTLAD+SL LP++ +++ESSV 
Sbjct: 345  FEVEVVGTKFARSSNKGPRKRSKKVLFGEGEADAVDALQTLADMSLRLPEALVDTESSVH 404

Query: 414  LKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSG 473
            + +++T      K  A  +   +H    +K   PK                 +  GR   
Sbjct: 405  VDDQKT------KIVAKSKLKGNHSTAGVKVASPK-----------------TTKGRVFL 441

Query: 474  NDVETVAEVKEQPEPPNS-MSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKF 532
            +DV  + +VK+     ++ + KR++KS  SK                       ++    
Sbjct: 442  HDVSPIPKVKDAVHQISAGIGKRRKKSQPSK---------------------ATDDVGDL 480

Query: 533  ASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASS------P 586
             SKGK +S ++   KQ +P +  E +S  D  R S D       AP + P  S      P
Sbjct: 481  ISKGK-SSHDTGYQKQGRPVKPSELNSSTDHGRESND------SAPSSIPVLSSKQFNLP 533

Query: 587  TKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRR 646
            TK +SRRK++  + L  K+ + SE+                     +KLS CLSS +VRR
Sbjct: 534  TKVRSRRKINTPKPLLDKDNQSSEDI--------------------KKLSNCLSSYLVRR 573

Query: 647  WCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLH 706
            W  FEWFYSAIDYPWF+ REFVEYL+HVGLGHIPRLTRVEWGVIRSSLGKPRR S++FL 
Sbjct: 574  WSIFEWFYSAIDYPWFAKREFVEYLDHVGLGHIPRLTRVEWGVIRSSLGKPRRFSEQFLS 633

Query: 707  DEREKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTI 738
            +E+EKL QYRES                            R+IA+HPKTRE+HDGSVLT+
Sbjct: 634  EEKEKLNQYRESVRKHYTELRAGTRDGLPTDLARPLSVGQRIIALHPKTREIHDGSVLTV 693

Query: 739  DHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISADKFSAISKELQVNGHP 797
            DH++CR+QFD+PELGVE VMD+D MP NPL+NMP +L RQ +  ++F     EL++NG P
Sbjct: 694  DHNRCRIQFDQPELGVELVMDVDCMPLNPLENMPASLTRQTVVFNRFIENLNELKMNGQP 753

Query: 798  ---NFGSPMLFAS-------DGHLEKAPILPN--TLQKQAKGDMNHALPQAKSLATDIVS 845
               N    + FAS       DG L  +P   +   L +  KG + +      + + + V 
Sbjct: 754  VERNMEGYIKFASCENMENTDGLLHSSPSTHHISNLMQHGKGYLANYSTHVATESGESVI 813

Query: 846  AQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSL 897
             QQA   Q   +  IQA++A ++ALS+        EA++ ELK  N+++ E++  GE+SL
Sbjct: 814  NQQAVNTQPFILAHIQAKDADIQALSDLTRALDKKEAVVSELKRMNDEV-ENEKDGENSL 872

Query: 898  KDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQAS 957
            KDSE  KKH A VL QL E N+Q                                    S
Sbjct: 873  KDSELFKKHYAAVLFQLNEVNEQV-----------------------------------S 897

Query: 958  SALLQVRQCNTHPESSRPSWPMHP--------ANVKMLDNS-HVSQESGSAVAEIVNGSR 1008
            SALL +RQ NT+ + + P   M P         +  + D S   +QESGS VAEIV  SR
Sbjct: 898  SALLCLRQRNTY-QGNNPQMWMKPMTYIGEPVGHCSLFDRSADETQESGSHVAEIVETSR 956

Query: 1009 LKAHTMVDAAVKAMSSVK-EGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS---PEQVNG 1064
             KA TMVDAA++AMSS+K EG    + I EA+D ++ +    D   S +RS      V+ 
Sbjct: 957  AKAQTMVDAAMQAMSSLKKEG----SNIEEAIDFVNNQLSADDLSTSAVRSSIPANSVHS 1012

Query: 1065 SLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT 1124
            ++   +   S T +  P ++A  T +    +++EAQIPSE+IT CVATLLMIQ CTER  
Sbjct: 1013 TVASQDQSSSCTTNLGPNSHAPETDMDHSPEQSEAQIPSEIITQCVATLLMIQKCTERQF 1072

Query: 1125 P-ADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            P +DVAQ++DSAV+SL PCC QNLPIY +I+ CMG I+ QILALIPT
Sbjct: 1073 PPSDVAQVLDSAVTSLKPCCSQNLPIYADIQKCMGIIRNQILALIPT 1119


>gi|356563900|ref|XP_003550195.1| PREDICTED: protein ALWAYS EARLY 3-like [Glycine max]
          Length = 1181

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/1256 (41%), Positives = 701/1256 (55%), Gaps = 161/1256 (12%)

Query: 1    MAPTRKSRSVNKRYAN--EVSPAKDVISPSKSK----------QKKKLSDKLGPQWSKGE 48
            MAP+RKSRSVNKR++   E + +KD I+ + SK          +K+KL+D LGPQW+K E
Sbjct: 1    MAPSRKSRSVNKRFSTVREAASSKDKITENASKNRLKVSPGIQKKRKLADMLGPQWNKEE 60

Query: 49   LQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDH 108
            L+ FYEAYR YGKDWKKVA  V NRS EMVEALY MNRAYLSLPEGTASVVGLIAMMTDH
Sbjct: 61   LEHFYEAYRKYGKDWKKVALAVHNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDH 120

Query: 109  YNVMEGSDSERESNDASEMPRKSQKRKRAKVQLSASK------EDISQSWSMAATGGCLS 162
            Y+V+ GSDS +ESND +E+ +KSQKR R K  LS SK       D SQS S+A+  GCLS
Sbjct: 121  YSVLGGSDSGKESNDDAEISKKSQKRLRGK-HLSDSKALEGHFSDHSQSHSVASGDGCLS 179

Query: 163  LLKRSRIDGNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAA 222
            LLK+ R  G +P AV+KRTPR P+SYS  KD+ D +    ++  +  VD ND  VAH  A
Sbjct: 180  LLKK-RHSGIRPHAVRKRTPRVPISYSIGKDNGDRFFSSARQGSKQMVDTND--VAHKIA 236

Query: 223  LALTEASQRGGSPQVSQSPHKKT--EHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCP 280
            LALTEASQRGGS ++S SP KK     G  S      K  P +E A  +   +  ++G  
Sbjct: 237  LALTEASQRGGSSKISGSPDKKFVPSLGLKS-----GKKHPKSEIAGANFCSSDLDDGSS 291

Query: 281  EARILNRRPENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEA 340
            E  + +    N  Y+R        E  G      K  K Y K  +  E  N   +D  EA
Sbjct: 292  ELSLGSTEGNNEDYSRKTIHRSGRENTGRERNQEKKIKKYGKNFETGENLNKHLNDVKEA 351

Query: 341  CSGTEEG--LSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFF-GDESTALNALQTLADL 397
             SGT++G  LS  K    ++ ++AKN     +  R +SKKL    DE +A +AL+TLADL
Sbjct: 352  SSGTDDGKNLSFIKSDFVTDFADAKNARSSYKGSRTKSKKLRLEKDEGSAFDALKTLADL 411

Query: 398  SLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITE 457
            SLMLP +  ++ESS Q KE                             G  +    +  E
Sbjct: 412  SLMLPVTNPDTESSAQFKE-----------------------------GNHDAVDESKME 442

Query: 458  AEDIIPR-----KSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVT 512
               + PR      SKLG+   ++   V E +   +      KRK+KS     +   E  T
Sbjct: 443  THKVFPRIESTASSKLGKVFSDNGVAVPEAEGAHQLNAGFRKRKQKSF---NLKYDEIHT 499

Query: 513  DTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEG--SSVNDQNR---AS 567
             +H++ + +S+A  +E  K   KGKR+S ++A S+Q K  + L    SS ND+     +S
Sbjct: 500  GSHLSGSQKSKAT-DEVKKSIVKGKRSSVSTAHSRQLKGVKSLGNLSSSANDKGEKDDSS 558

Query: 568  IDL--VAPTGQA-PVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQ 624
              L  V+ T Q  P+        + + RRKM+  + +  +++  S N   +Q  K+  S 
Sbjct: 559  FSLMKVSSTNQGGPL-------NRGKPRRKMEKPKPMVQQDLVVSRNIFSSQHKKSIASL 611

Query: 625  EDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTR 684
            +D   S K KL  CLSS  +RRWCT EWFYSAIDYPWFS REFVEYL+HVGLGH+PRLTR
Sbjct: 612  QDGSYSQKGKLINCLSSYQMRRWCTLEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTR 671

Query: 685  VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES-------------------------- 718
            +EWGVIRSSLG+PRR S++FL +E+ KL QYRES                          
Sbjct: 672  IEWGVIRSSLGRPRRFSEQFLIEEKNKLNQYRESVRSHYAEILSGTKEGLPTDLAQPLIV 731

Query: 719  --RVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL- 775
              RVIAIHPKTRE+HDGSVLT+DH + RVQFD+PELGVEFVMDID MP  P +NMP +L 
Sbjct: 732  GQRVIAIHPKTREIHDGSVLTVDHCRYRVQFDQPELGVEFVMDIDCMPLYPFENMPTSLI 791

Query: 776  RRQISADKFSAISKELQVNGHPN----FGSPMLFASDG-----HLEKAPIL--PNTLQKQ 824
            +  IS+ + +    EL+ NG        G  +L  S+      +L   P +   +TL KQ
Sbjct: 792  QHNISSAQINQDFIELKPNGKLKQRKVAGHTILSPSENLDTIKNLHIPPTMHGSSTLSKQ 851

Query: 825  AKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSE--------EALL 876
                 + + P+       I +AQ A+  Q   +  + ++EA + A+SE        E +L
Sbjct: 852  VFSSSSKSQPKVVCSEIGIGNAQLASSSQPSLLDHVHSKEADILAISELNRALDKKELVL 911

Query: 877  MELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLS 936
             ELK+ N+ + ESQ  G++S+KDSEP K++ A+VL QL EAN+Q              +S
Sbjct: 912  SELKHMNDGVSESQKYGDNSVKDSEPFKRNYASVLKQLTEANEQ--------------VS 957

Query: 937  LQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSWPMHPANVKMLDNSH-VSQE 995
                 L  R +       QASS++L ++      +   PS     +N     N   +SQ 
Sbjct: 958  SALFCLRQRNT------YQASSSVLSLKPMANFDD---PSGQASSSNCSACHNQESISQ- 1007

Query: 996  SGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSV 1055
              S + EIV  SR KA  MV  A +AMS++++ E    +I +A++ I+ +    +P  S 
Sbjct: 1008 --SHITEIVESSRRKARMMVVQATQAMSNLRKTESKVERIEDAINFINNQLSVDEPTASA 1065

Query: 1056 IRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLM 1115
                   + SL   +   +   +P  + +    +L   SD+NE +IPSELI+ C+ATL +
Sbjct: 1066 TTFLPTDSFSLASQDQLTASVLNPLASCHVQDAELNSSSDQNEMKIPSELISHCLATLFV 1125

Query: 1116 IQTCTERHT-PADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            IQ CTER   PADVAQ++DSAV+SL P   +NLPIY EI+ CMG I+ QILALIPT
Sbjct: 1126 IQKCTERQFPPADVAQVLDSAVTSLQPLSLKNLPIYGEIQKCMGIIRNQILALIPT 1181


>gi|9294690|dbj|BAB03056.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1128

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/1232 (39%), Positives = 678/1232 (55%), Gaps = 196/1232 (15%)

Query: 15   ANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNR 73
            A  VSP KD  S SK+KQ+K KLSD LGPQWSK EL+RFYE YR +GK+WKKVA  V +R
Sbjct: 17   AKAVSPHKDEESMSKTKQRKRKLSDMLGPQWSKEELERFYEGYRKFGKEWKKVAGFVHSR 76

Query: 74   SAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEG-SDSERESNDASEMPRKSQ 132
            SAEMVEALY MN+AYLSLPEGTASVVGL AMMTDHY+V+ G SDSE+E+N+  E PR + 
Sbjct: 77   SAEMVEALYTMNKAYLSLPEGTASVVGLTAMMTDHYSVLHGGSDSEQENNEGIETPRSAP 136

Query: 133  KRKRAKV--QLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQ 190
            KR R K     S   E +S      ++ G +  LK+ R +   PRAV KRTPR P+SY+ 
Sbjct: 137  KRSRVKSSDHPSIGLEGLSDRLQFRSSSGFMPSLKKRRTE-TMPRAVGKRTPRIPISYTL 195

Query: 191  KKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKS 250
            +KD R+ Y+   K+      D  DD++ H  ALAL EASQRGGS + S +P++K      
Sbjct: 196  EKDTRERYLSPVKRGLNQKGDDTDDDMEHEIALALAEASQRGGSTKNSHTPNRKA----- 250

Query: 251  SPVQIWDKMFPP---AETAHPDAREALN-------EEGCPEARILNRRPENGAYTRARKS 300
                   KM+PP    E    D   A+        E+   E  + +   +N  Y+  R  
Sbjct: 251  -------KMYPPDKKGERMRADIDLAIAKLHATDMEDVRCEPSLGSTEADNADYSGGRND 303

Query: 301  LMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGKVGSE 358
            L   EG   VE  +KG+ +YR+++ ++E      +D  EACSGT+E   L +   K   E
Sbjct: 304  LTHGEGSSAVEKQQKGRTYYRRRVGIKE------EDAKEACSGTDEAPSLGAPDEKFEQE 357

Query: 359  ISNAKNDHLPLQMQRKRSKK-LFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEE 417
                K      ++ R++SKK LF  DE TA +AL TLADLSLM+P++  ++ESSVQ +E+
Sbjct: 358  -REGKALKFTYKVSRRKSKKSLFTADEDTACDALHTLADLSLMMPETATDTESSVQAEEK 416

Query: 418  RT--AFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGND 475
            +   A+  D K + P   S             K  +L           R SK  RY  ND
Sbjct: 417  KAGEAYVSDFKGTDPASMS-------------KSSSL-----------RNSKQRRYGSND 452

Query: 476  VETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASK 535
            +       E+  P +S+ +++R+  L  K+   E    + +     S+ + EE+ K   +
Sbjct: 453  L--CNPELERKSPSSSLIQKRRQKALPAKVLKDELAASSQVIEPCNSKGIGEEY-KPVGR 509

Query: 536  GKRTS--QNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAP----VASPASSPTKH 589
            GKR++  +NS + K  K          +D   +S ++V     AP    +    + PTK 
Sbjct: 510  GKRSASIRNSHEKKSAKS---------HDHTSSSNNIVEEDESAPSNAVIKKQVNLPTKV 560

Query: 590  QSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
            +SRRK+  ++ L+  + K SE                      EK S C+SS   RRWC 
Sbjct: 561  RSRRKIVTEKPLTIDDGKISETI--------------------EKFSHCISSFRARRWCI 600

Query: 650  FEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDER 709
            FEWFYSAIDYPWF+ +EFVEYL+HVGLGH+PRLTRVEWGVIRSSLGKPRR S++FL +E+
Sbjct: 601  FEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEK 660

Query: 710  EKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHD 741
            EKL  YR+S                            RVI +HPK+RE+HDG+VLT+DH 
Sbjct: 661  EKLYLYRDSVRKHYDELNTGMREGLPMDLARPLNVSQRVICLHPKSREIHDGNVLTVDHC 720

Query: 742  KCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKF---SAISKELQVNGHPN 798
            + R+QFD PELGVEFV D + MP NPL+NMP +L R  +   +   + I +++      +
Sbjct: 721  RYRIQFDNPELGVEFVKDTECMPLNPLENMPASLARHYAFSNYHIQNPIEEKMHERAKES 780

Query: 799  F--GSPMLFASDGHLEKAPI--LPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQL 854
               G P L    GHL  +P   + N+L KQ K D++ + PQA+    D   A Q    Q 
Sbjct: 781  MLEGYPKLSCETGHLLSSPNYNISNSL-KQEKVDISSSNPQAQD-GVDEALALQLFNSQP 838

Query: 855  CTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQ-NGGESSLKDSEPLKK 905
             ++ QIQAREA V+ALSE        E +L ELK  N++++ESQ +G  ++LKDSE  KK
Sbjct: 839  SSIGQIQAREADVQALSELTRALDKKELVLRELKCMNDEVVESQKDGHNNALKDSESFKK 898

Query: 906  HIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQ 965
              A VL QL E N+Q                                    S ALL +RQ
Sbjct: 899  QYAAVLFQLSEINEQV-----------------------------------SLALLGLRQ 923

Query: 966  CNTHPES------SRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAV 1019
             NT+ E+       R S    P      ++++ S  +G  V+EIV  SR+KA  MV  AV
Sbjct: 924  RNTYQENVPYSSIRRMSKSGEPDGQLTYEDNNASDTNGFHVSEIVESSRIKARKMVYRAV 983

Query: 1020 KAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDP 1079
            +A+  +++ E+    + EA+D ++  QL+ D           V  + G  +  +  T +P
Sbjct: 984  QALELLRKDENNNVNMEEAIDFVNN-QLSIDQTEG-----SSVQQTQGGQDQRLPSTPNP 1037

Query: 1080 QPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHTP-ADVAQIIDSAVSS 1138
              +  A+ + L +  D+N+ Q+PS+L++ C+ATLLMIQ CTER  P ++VAQ++DSAV+S
Sbjct: 1038 PSSTPANDSHL-NQPDQNDLQVPSDLVSRCIATLLMIQKCTERQFPPSEVAQVLDSAVAS 1096

Query: 1139 LHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            L PCC QNLPIY EI+ CMG I+ QILAL+P+
Sbjct: 1097 LQPCCSQNLPIYTEIQKCMGIIRNQILALVPS 1128


>gi|297835114|ref|XP_002885439.1| always early protein 3 [Arabidopsis lyrata subsp. lyrata]
 gi|297331279|gb|EFH61698.1| always early protein 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1131

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/1237 (40%), Positives = 682/1237 (55%), Gaps = 203/1237 (16%)

Query: 15   ANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNR 73
            A  +SP KD  S SK+KQ+K KLSD LGPQWSK EL+RFYE YR +GK+WKKVAA V +R
Sbjct: 17   AKAISPHKDEDSMSKTKQRKRKLSDMLGPQWSKEELERFYEGYRKFGKEWKKVAAFVHSR 76

Query: 74   SAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEG-SDSERESNDASEMPRKSQ 132
            SAEMVEALY MN+AYLSLPEGTASVVGL AMMTDHY+V+ G SDSE+E+N+  E PR + 
Sbjct: 77   SAEMVEALYTMNKAYLSLPEGTASVVGLNAMMTDHYSVLHGGSDSEQENNEGIETPRSAP 136

Query: 133  KRKRAKV--QLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQ 190
            KR R K     S   E +S      ++ G +  LK+ R +   PRAV KRTPR P+SY+ 
Sbjct: 137  KRSRVKSSDNPSIGLEGLSDRLQFRSSSGFMPSLKKRRTE-TVPRAVGKRTPRIPISYTL 195

Query: 191  KKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKS 250
            +KD R+ Y+   K+      D  DD++ H  ALAL EASQRGGS + S +P++K      
Sbjct: 196  EKDTRERYLSPVKRGLNQKGDDTDDDMEHEIALALAEASQRGGSTKNSHTPNRKA----- 250

Query: 251  SPVQIWDKMFPP---AETAHPDAREALN-------EEGCPEARILNRRPENGAYTRARKS 300
                   KM+PP    E    D   A+        E+   E  + +   +NG Y+  R  
Sbjct: 251  -------KMYPPDKKGERMRADIDLAIAKLHATDMEDVRCEPSLGSTEADNGDYSGGRND 303

Query: 301  LMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGKVGSE 358
            LM  EG   VE  +KG+ +YR+++ ++E      +D  EACSGT+E   L +   K   E
Sbjct: 304  LMHGEGSSAVEKQQKGRTYYRRRLGIKE------EDAKEACSGTDEAPSLGAPDEKFEPE 357

Query: 359  ISNAKNDHLPLQMQRKRSKK-LFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEE 417
              + K+     ++ R++SKK LF  DE TA +ALQTLADLSLM+P++  ++ESSVQ +E+
Sbjct: 358  -RDGKSLKFTYKVSRRKSKKSLFTADEDTACDALQTLADLSLMMPETATDTESSVQAEEK 416

Query: 418  RT--AFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGND 475
            R   A+  D K + P   S             K  +L           R SK  R   ND
Sbjct: 417  RAGKAYVSDFKGTDPASMS-------------KSSSL-----------RNSKQRRSGTND 452

Query: 476  V-ETVAEVKEQPEPPNSMSKRKRKSVLSKKIS----NSEAVTDTHMTRTLESEAVAEEHN 530
            + +T  E K    P +S+ +++R+ VL  K+       E    + +     ++ + EE N
Sbjct: 453  LCDTEPERKS---PSSSLIRKRRQKVLPAKVREDVLKDELAASSKVIEPCNNKGIGEE-N 508

Query: 531  KFASKGKRTS--QNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAP----VASPAS 584
            K   +GKR++  +NS + K  KP         +D+  +S ++V     AP    +    +
Sbjct: 509  KPVGRGKRSASIRNSHEKKSVKP---------HDRTSSSNNIVEEDESAPSNAVIKKQVN 559

Query: 585  SPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMV 644
             PTK +SRRK+  ++ L+  + K SE                      EK S   SS   
Sbjct: 560  LPTKVRSRRKIVTEKPLTIDDGKISETL--------------------EKFSHYTSSFRA 599

Query: 645  RRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRF 704
            RRWC FEWFYSAIDYPWF+ +EFVEYL+HVGLGH+PRLTRVEWGVIRSSLGKPRR S++F
Sbjct: 600  RRWCLFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQF 659

Query: 705  LHDEREKLKQYRES----------------------------RVIAIHPKTRELHDGSVL 736
            L +E+EKL  YR+S                            RVI++HPK+RE+HDGSVL
Sbjct: 660  LKEEKEKLYLYRDSVRKHYDELNTGMREGLPMDLARPLNVSQRVISLHPKSREIHDGSVL 719

Query: 737  TIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGH 796
            T+DH + R+QFD PELGVEFV D + MP NPL+NMP +L R  +   ++ I   ++   H
Sbjct: 720  TVDHCRYRIQFDHPELGVEFVKDTECMPLNPLENMPASLARHYAFSNYN-IQNPVEEKMH 778

Query: 797  PNFGSPMLFA-SDGHLEKAPILP-------NTLQKQAKGDMNHALPQAKSLATDIVSAQQ 848
                  ML   S    E   +LP       N+L KQ K D++ + PQA+    D     Q
Sbjct: 779  ERAKESMLEGYSKLSCETGRLLPSPNYNVSNSL-KQEKVDISSSNPQAQD-GVDEALDLQ 836

Query: 849  AAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDS 900
                Q  ++  IQAREA V+ALSE        E +L ELK  N++++ESQ  G ++LKDS
Sbjct: 837  LFNSQPSSIGHIQAREADVQALSELTRALDKKELVLRELKCMNDEVVESQKDGHNALKDS 896

Query: 901  EPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSAL 960
            E  KK  A VL QL E N+Q                                    S AL
Sbjct: 897  ESFKKQYAAVLFQLSEINEQV-----------------------------------SLAL 921

Query: 961  LQVRQCNTHPE------SSRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTM 1014
            L +RQ NT+ E      + R +    P       +++VS  +G  V+EIV  SR+KA  M
Sbjct: 922  LGLRQRNTYQENVPYASTKRMNKSGEPDGQLTYVDNYVSDTNGFHVSEIVESSRIKARKM 981

Query: 1015 VDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVS 1074
            V  AV+A++ +++ E+    + EA+D ++  QL+ D           V  + G  +  + 
Sbjct: 982  VYRAVQALALLRKDENNNVNMEEAIDFVNN-QLSIDQTEG-----SSVQQTQGAQDQRLP 1035

Query: 1075 GTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHTP-ADVAQIID 1133
             T +P  +  A+ + L +  D+N+ QIPSEL++ C+ATLLMIQ CTER  P ++VAQ++D
Sbjct: 1036 STPNPPSSTPANDSHL-NPPDQNDLQIPSELVSRCMATLLMIQKCTERQFPPSEVAQVLD 1094

Query: 1134 SAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            SAV+SL PCC QNLPIY EI+ CMG I+ QILAL+P+
Sbjct: 1095 SAVASLQPCCSQNLPIYTEIQKCMGIIRNQILALVPS 1131


>gi|356519986|ref|XP_003528649.1| PREDICTED: protein ALWAYS EARLY 3-like [Glycine max]
          Length = 1155

 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/1270 (40%), Positives = 683/1270 (53%), Gaps = 215/1270 (16%)

Query: 1    MAPTRKSRSVNKRYAN--EVSPAKDVISPSKSK---QKKKLSDKLGPQWSKGELQRFYEA 55
            MAP+RKSRSVNKR++   E + +KD I+ + SK   +K+KL+D LGPQW+K EL+ FYEA
Sbjct: 1    MAPSRKSRSVNKRFSTVREAASSKDKIAENASKNRLKKRKLADMLGPQWNKEELEHFYEA 60

Query: 56   YRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGS 115
            YR YG+DWKKV   +RNRS EMVEALY MNRAYLSLPEGTASVVGLIAMMTDHY+V+ GS
Sbjct: 61   YRKYGRDWKKVVLAIRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGS 120

Query: 116  DSERESNDASEMPRKSQKRKRAKVQLSASK------EDISQSWSMAATGGCLSLLKRSRI 169
            DS +ESND +E+ +KSQKR R K  LS SK       D SQS S+A+  GCLSLLK+ R 
Sbjct: 121  DSGKESNDDAEISKKSQKRLRGK-HLSDSKALEGHFSDHSQSHSVASGDGCLSLLKK-RH 178

Query: 170  DGNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEAS 229
             G +  AV+KRTPR P+SYS  KD+ D +    ++  +  VD ND  VAH  ALALTEAS
Sbjct: 179  SGIRLHAVRKRTPRVPISYSIGKDNGDRFFSSARQGSKQMVDTND--VAHKVALALTEAS 236

Query: 230  QRGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRP 289
            QRGGS ++S SP KK      SP     K  P +E A      +  ++G  E  + +   
Sbjct: 237  QRGGSSKISGSPDKKF---VPSPGLKSGKKHPKSEIAGAKFCSSDLDDGSSELSLGSTEG 293

Query: 290  ENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG-- 347
             N  Y+R        E  G      K  K  RK ++  E  N   +D  EA SGT++G  
Sbjct: 294  NNEDYSRKTIHWSGRENTGRGRNQEKKIKKDRKNLETGENLNKHLNDIKEASSGTDDGKN 353

Query: 348  LSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFF-GDESTALNALQTLADLSLMLPDSTM 406
            LS  K    ++ ++AKN     +  R +S KL    DE +A +AL+TLADLSLMLP +  
Sbjct: 354  LSFIKSNFVTDFADAKNSRSSYKGSRMKSTKLLLEKDEGSAFDALKTLADLSLMLPVTNP 413

Query: 407  ESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPR-- 464
            ++ESS Q    +   D+ D+S                             E   + PR  
Sbjct: 414  DTESSAQF--NKGNHDVVDESK---------------------------METHKVFPRIE 444

Query: 465  ---KSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLE 521
                +KLG+   +D   V E +   +      KRK+KS   K                  
Sbjct: 445  STASNKLGKVFSDDGAAVPEAEGAHQLNAGFKKRKQKSFNLK------------------ 486

Query: 522  SEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEG--SSVNDQ---NRASIDL--VAPT 574
                 +E  K   KGKR+S ++A S+Q K  + L    SS ND+   + +S  L  V+ T
Sbjct: 487  ---ATDEVKKSIVKGKRSSVSTAHSRQLKGVKSLGNLSSSTNDKRERDDSSFSLMKVSST 543

Query: 575  GQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEK 634
             Q    SP +   + + RRKM+                 K +P    + Q+D       K
Sbjct: 544  YQ---GSPLN---RGKPRRKME-----------------KPKP----MVQQDL-----GK 571

Query: 635  LSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSL 694
            L  CLSS  +RRWCTFEWFYSAIDYPWFS REFVEYL HVGLGH+PRLTR+EWGVIRSSL
Sbjct: 572  LVNCLSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLYHVGLGHVPRLTRIEWGVIRSSL 631

Query: 695  GKPRRLSKRFLHDEREKLKQYRES----------------------------RVIAIHPK 726
            G+PRR S++FL +E+ KL QYRES                             VIAIHPK
Sbjct: 632  GRPRRFSEQFLIEEKHKLNQYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQHVIAIHPK 691

Query: 727  TRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL-RRQISADKFS 785
            TRE+HDGSVLT+DH + RVQFD+PELGVEFVMDID MP  P +NMP +L +  IS+   +
Sbjct: 692  TREIHDGSVLTVDHCRYRVQFDQPELGVEFVMDIDCMPLYPFENMPTSLIQYNISSAPIN 751

Query: 786  AISKELQVNGHPN----FGSPMLFASDG-------HLEKAPILPNTLQKQAKGD----MN 830
                EL+ NG        G  +L  ++        H+       +TL KQ        +N
Sbjct: 752  EDFIELKPNGKLKQRKVAGHTILSPTENTDAIENLHISSTMHGRSTLSKQTLSKSISLLN 811

Query: 831  HALPQAKSLATD--------------------IVSAQQAAYGQLCTVPQIQAREATVRAL 870
               P+  S  ++                    I +AQ A+  +   +  + ++EA + A+
Sbjct: 812  VGNPETDSEFSERLVSSSSSKSQLKVVCSEIGIGNAQLASSSRPSLLDHVHSKEADILAI 871

Query: 871  SE--------EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQAC 922
            SE        E +L ELK+ N+ + ESQ  G++S+KDSEP K++ A+VL QL EAN+Q  
Sbjct: 872  SELNCALDKKERVLSELKHMNDGVSESQKYGDNSVKDSEPFKRNYASVLKQLTEANEQ-- 929

Query: 923  GFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSWPMHPA 982
                        +S     L  R +       QASS++L ++      +   PS     +
Sbjct: 930  ------------VSSALFCLRQRNT------YQASSSVLSLKPLANFDD---PSGQASSS 968

Query: 983  NVKMLDNSH-VSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDH 1041
            N     N   +SQ   S +AEIV  SR KA TMV  A +AMSS+++ E    +I +A++ 
Sbjct: 969  NCSACHNQESISQ---SHIAEIVESSRRKARTMVVEATQAMSSLRKTESKVERIEDAINF 1025

Query: 1042 IDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQI 1101
            I+ +    +P  S        + SL   +   +   +P  + +    +L   SD+NE +I
Sbjct: 1026 INSQLSVDEPTASATTFLPADSFSLASQDQLTANILNPLASCHVQDAELNSSSDQNEMKI 1085

Query: 1102 PSELITSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRI 1160
            PSELI+ C+ATL MIQ CTER   PADVAQ++DSAV+SL P   +NLP+Y EI+ CMG I
Sbjct: 1086 PSELISHCLATLFMIQKCTERLFPPADVAQVLDSAVTSLQPLSSKNLPVYGEIQKCMGII 1145

Query: 1161 KTQILALIPT 1170
            + QILALIPT
Sbjct: 1146 RNQILALIPT 1155


>gi|186510286|ref|NP_001078197.2| protein ALWAYS EARLY 3 [Arabidopsis thaliana]
 gi|75323048|sp|Q6A332.1|ALY3_ARATH RecName: Full=Protein ALWAYS EARLY 3; Short=AtALY3
 gi|50539422|emb|CAE47462.1| always early protein 3 [Arabidopsis thaliana]
 gi|332642987|gb|AEE76508.1| protein ALWAYS EARLY 3 [Arabidopsis thaliana]
          Length = 1132

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/1236 (39%), Positives = 679/1236 (54%), Gaps = 200/1236 (16%)

Query: 15   ANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNR 73
            A  VSP KD  S SK+KQ+K KLSD LGPQWSK EL+RFYE YR +GK+WKKVA  V +R
Sbjct: 17   AKAVSPHKDEESMSKTKQRKRKLSDMLGPQWSKEELERFYEGYRKFGKEWKKVAGFVHSR 76

Query: 74   SAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEG-SDSERESNDASEMPRKSQ 132
            SAEMVEALY MN+AYLSLPEGTASVVGL AMMTDHY+V+ G SDSE+E+N+  E PR + 
Sbjct: 77   SAEMVEALYTMNKAYLSLPEGTASVVGLTAMMTDHYSVLHGGSDSEQENNEGIETPRSAP 136

Query: 133  KRKRAKV--QLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQ 190
            KR R K     S   E +S      ++ G +  LK+ R +   PRAV KRTPR P+SY+ 
Sbjct: 137  KRSRVKSSDHPSIGLEGLSDRLQFRSSSGFMPSLKKRRTE-TMPRAVGKRTPRIPISYTL 195

Query: 191  KKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKS 250
            +KD R+ Y+   K+      D  DD++ H  ALAL EASQRGGS + S +P++K      
Sbjct: 196  EKDTRERYLSPVKRGLNQKGDDTDDDMEHEIALALAEASQRGGSTKNSHTPNRKA----- 250

Query: 251  SPVQIWDKMFPP---AETAHPDAREALN-------EEGCPEARILNRRPENGAYTRARKS 300
                   KM+PP    E    D   A+        E+   E  + +   +N  Y+  R  
Sbjct: 251  -------KMYPPDKKGERMRADIDLAIAKLHATDMEDVRCEPSLGSTEADNADYSGGRND 303

Query: 301  LMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGKVGSE 358
            L   EG   VE  +KG+ +YR+++ ++E      +D  EACSGT+E   L +   K   E
Sbjct: 304  LTHGEGSSAVEKQQKGRTYYRRRVGIKE------EDAKEACSGTDEAPSLGAPDEKFEQE 357

Query: 359  ISNAKNDHLPLQMQRKRSKK-LFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEE 417
                K      ++ R++SKK LF  DE TA +AL TLADLSLM+P++  ++ESSVQ +E+
Sbjct: 358  -REGKALKFTYKVSRRKSKKSLFTADEDTACDALHTLADLSLMMPETATDTESSVQAEEK 416

Query: 418  RT--AFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGND 475
            +   A+  D K + P   S             K  +L           R SK  RY  ND
Sbjct: 417  KAGEAYVSDFKGTDPASMS-------------KSSSL-----------RNSKQRRYGSND 452

Query: 476  VETVAEVKEQPEPPNSMSKRKRKSVLSKKISNS----EAVTDTHMTRTLESEAVAEEHNK 531
            +       E+  P +S+ +++R+  L  K+  +    E    + +     S+ + EE+ K
Sbjct: 453  L--CNPELERKSPSSSLIQKRRQKALPAKVRENVLKDELAASSQVIEPCNSKGIGEEY-K 509

Query: 532  FASKGKRTS--QNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAP----VASPASS 585
               +GKR++  +NS + K  K          +D   +S ++V     AP    +    + 
Sbjct: 510  PVGRGKRSASIRNSHEKKSAKS---------HDHTSSSNNIVEEDESAPSNAVIKKQVNL 560

Query: 586  PTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVR 645
            PTK +SRRK+  ++ L+  + K SE                      EK S C+SS   R
Sbjct: 561  PTKVRSRRKIVTEKPLTIDDGKISETI--------------------EKFSHCISSFRAR 600

Query: 646  RWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFL 705
            RWC FEWFYSAIDYPWF+ +EFVEYL+HVGLGH+PRLTRVEWGVIRSSLGKPRR S++FL
Sbjct: 601  RWCIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFL 660

Query: 706  HDEREKLKQYRES----------------------------RVIAIHPKTRELHDGSVLT 737
             +E+EKL  YR+S                            RVI +HPK+RE+HDG+VLT
Sbjct: 661  KEEKEKLYLYRDSVRKHYDELNTGMREGLPMDLARPLNVSQRVICLHPKSREIHDGNVLT 720

Query: 738  IDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKF---SAISKELQVN 794
            +DH + R+QFD PELGVEFV D + MP NPL+NMP +L R  +   +   + I +++   
Sbjct: 721  VDHCRYRIQFDNPELGVEFVKDTECMPLNPLENMPASLARHYAFSNYHIQNPIEEKMHER 780

Query: 795  GHPNF--GSPMLFASDGHLEKAPI--LPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAA 850
               +   G P L    GHL  +P   + N+L KQ K D++ + PQA+    D   A Q  
Sbjct: 781  AKESMLEGYPKLSCETGHLLSSPNYNISNSL-KQEKVDISSSNPQAQD-GVDEALALQLF 838

Query: 851  YGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQ-NGGESSLKDSE 901
              Q  ++ QIQAREA V+ALSE        E +L ELK  N++++ESQ +G  ++LKDSE
Sbjct: 839  NSQPSSIGQIQAREADVQALSELTRALDKKELVLRELKCMNDEVVESQKDGHNNALKDSE 898

Query: 902  PLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALL 961
              KK  A VL QL E N+Q                                    S ALL
Sbjct: 899  SFKKQYAAVLFQLSEINEQV-----------------------------------SLALL 923

Query: 962  QVRQCNTHPES------SRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMV 1015
             +RQ NT+ E+       R S    P      ++++ S  +G  V+EIV  SR+KA  MV
Sbjct: 924  GLRQRNTYQENVPYSSIRRMSKSGEPDGQLTYEDNNASDTNGFHVSEIVESSRIKARKMV 983

Query: 1016 DAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFVSG 1075
              AV+A+  +++ E+    + EA+D ++  QL+ D           V  + G  +  +  
Sbjct: 984  YRAVQALELLRKDENNNVNMEEAIDFVNN-QLSIDQTEG-----SSVQQTQGGQDQRLPS 1037

Query: 1076 TCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHTP-ADVAQIIDS 1134
            T +P  +  A+ + L +  D+N+ Q+PS+L++ C+ATLLMIQ CTER  P ++VAQ++DS
Sbjct: 1038 TPNPPSSTPANDSHL-NQPDQNDLQVPSDLVSRCIATLLMIQKCTERQFPPSEVAQVLDS 1096

Query: 1135 AVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            AV+SL PCC QNLPIY EI+ CMG I+ QILAL+P+
Sbjct: 1097 AVASLQPCCSQNLPIYTEIQKCMGIIRNQILALVPS 1132


>gi|79394363|ref|NP_187189.2| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
 gi|75323049|sp|Q6A333.1|ALY2_ARATH RecName: Full=Protein ALWAYS EARLY 2; Short=AtALY2
 gi|50539420|emb|CAE47461.1| always early 2 protein [Arabidopsis thaliana]
 gi|332640706|gb|AEE74227.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
          Length = 1051

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/917 (47%), Positives = 574/917 (62%), Gaps = 69/917 (7%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYG 60
           MAP RKSRSVNKR+ NE SP KD     K+K +KKLSDKLGPQW++ EL+RFY+AYR +G
Sbjct: 1   MAPVRKSRSVNKRFTNETSPRKDAGKSKKNKLRKKLSDKLGPQWTRLELERFYDAYRKHG 60

Query: 61  KDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSER 119
           ++W++VAA +RN RS +MVEAL+NMNRAYLSLPEGTASV GLIAMMTDHY+VMEGS SE 
Sbjct: 61  QEWRRVAAAIRNSRSVDMVEALFNMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSGSEG 120

Query: 120 ESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVKK 179
           E +DASE+PRK QKRKRAK Q S S E++    S+ +  GCL+ LK++R +G Q  A  K
Sbjct: 121 EGHDASEVPRKQQKRKRAKPQRSDSPEEVDIQQSIGSPDGCLTFLKQARANGTQRHATGK 180

Query: 180 RTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQ 239
           RTPR PV  S  +DDR+   P NK+ R+   DANDD VAH  ALALT+AS+RGGSP+VS+
Sbjct: 181 RTPRVPVQTSFMRDDREGSTPPNKRARKQ-FDANDD-VAHFLALALTDASRRGGSPKVSE 238

Query: 240 SPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRARK 299
           SP+++TE   SSP++ W KM    ++       ++ EE    +R   R+ ++   T    
Sbjct: 239 SPNRRTELSDSSPIKSWGKMSRTRKSQSKHCGSSIFEEWMESSR--ERKLDSDKDTTL-- 294

Query: 300 SLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGSEI 359
            LMDME  G +E  RKGK+ Y+K++KVEE   + SDD GEACS T +GL S+  +  + I
Sbjct: 295 -LMDMERAGEMEAPRKGKRVYKKRVKVEEAECNDSDDNGEACSAT-QGLRSKSQRRKAAI 352

Query: 360 SNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSL-MLPDSTMESESSVQLKEER 418
             ++  + P +  +KR  K   G    A +ALQ LA+LS  MLP + MESE S QLKEER
Sbjct: 353 EASREKYSP-RSPKKRDDKHTSG----AFDALQALAELSASMLPANLMESELSAQLKEER 407

Query: 419 TAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVET 478
           T +D+D+KSS PE TSTS   EK  ++ P +  L+ I+  E+   RKSK  R    D + 
Sbjct: 408 TEYDMDEKSSTPEATSTSSHGEKA-NVEPDDSLLHAISSVENANKRKSKPSRLVSTDCDD 466

Query: 479 VAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFAS--KG 536
           V   K QP+   S+ KRK       K+   EA  +    +++  + + ++ N   S  K 
Sbjct: 467 VPTGKLQPQTSGSLRKRK------PKVLGDEAPAEFSQNKSINKKELPQDENNMKSLVKT 520

Query: 537 KRTSQNSAQSKQWKPGRVLEGSSV-NDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKM 595
           KR  Q  AQSKQ K  + LE S++ +D+ R  +D+VA   Q   + P S   K  +RRK 
Sbjct: 521 KRAGQVPAQSKQMKTVKALEESAITSDKKRPGMDIVASPKQVSDSGPTSLSQKPPNRRKK 580

Query: 596 DLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYS 655
            L++ L  K  K SE + K   +  SLS+++ LL  K+KL+  LS    RR C FEWFYS
Sbjct: 581 SLQKSLQEK-AKSSETTHKAARSSRSLSEQELLL--KDKLATSLSFPFARRRCIFEWFYS 637

Query: 656 AIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQY 715
           AID+PWFS  EFV+YLNHVGLGHIPRLTR+EW VI+SSLG+PRR S+RFLH+EREKLKQY
Sbjct: 638 AIDHPWFSKMEFVDYLNHVGLGHIPRLTRLEWSVIKSSLGRPRRFSERFLHEEREKLKQY 697

Query: 716 RES----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQF 747
           RES                            RVIAIHPKTRE+HDG +LT+DH+KC V F
Sbjct: 698 RESVRKHYTELRTGAREGLPTDLARPLAVGNRVIAIHPKTREIHDGKILTVDHNKCNVLF 757

Query: 748 DRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFAS 807
           D  +LGVE VMDID MP NPL+ MPE LRRQI  DK  ++ KE Q++G+ N G  +LF  
Sbjct: 758 D--DLGVELVMDIDCMPLNPLEYMPEGLRRQI--DKCLSMKKEAQLSGNTNLGVSVLFPP 813

Query: 808 DGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTV-----PQIQA 862
            G LE      N    Q  GDM   +   K ++++  S +Q  +  + T       +IQ 
Sbjct: 814 CG-LENVSFSMNPPLNQ--GDMIAPILHGK-VSSNTSSPRQTNHSYITTYNKAKEAEIQR 869

Query: 863 REATVRALSEEALLMEL 879
            +A   AL E+ +  E+
Sbjct: 870 AQALQHALDEKEMEPEM 886



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 126/171 (73%), Gaps = 9/171 (5%)

Query: 1002 EIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQ 1061
            EIV GS+ +A  MVDAA+KA SSVKEGED  T I EAL+ + K QL    R S+++  E 
Sbjct: 888  EIVKGSKTRAQAMVDAAIKAASSVKEGEDVNTMIQEALELVGKNQLL---RSSMVKHHEH 944

Query: 1062 VNGSL-GHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCT 1120
            VNGS+  HHN   S   +P   N+ +    QD S+KN AQ+PSELITSCVAT LMIQ CT
Sbjct: 945  VNGSIEHHHNPSPSNGSEPVANNDLNS---QDGSEKN-AQMPSELITSCVATWLMIQMCT 1000

Query: 1121 ER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            ER + PADVAQ+ID+AV+SL P CPQNLPIYREI+ CMGRIKTQI++L+PT
Sbjct: 1001 ERQYPPADVAQLIDAAVTSLQPRCPQNLPIYREIQTCMGRIKTQIMSLVPT 1051


>gi|79313127|ref|NP_001030643.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
 gi|334185096|ref|NP_001189812.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
 gi|334185098|ref|NP_001189813.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
 gi|332640707|gb|AEE74228.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
 gi|332640709|gb|AEE74230.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
 gi|332640710|gb|AEE74231.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
          Length = 1052

 Score =  706 bits (1823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/918 (47%), Positives = 573/918 (62%), Gaps = 70/918 (7%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDV-ISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNY 59
           MAP RKSRSVNKR+ NE SP KD   S     +KKKLSDKLGPQW++ EL+RFY+AYR +
Sbjct: 1   MAPVRKSRSVNKRFTNETSPRKDAGKSKKNKLRKKKLSDKLGPQWTRLELERFYDAYRKH 60

Query: 60  GKDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
           G++W++VAA +RN RS +MVEAL+NMNRAYLSLPEGTASV GLIAMMTDHY+VMEGS SE
Sbjct: 61  GQEWRRVAAAIRNSRSVDMVEALFNMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSGSE 120

Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVK 178
            E +DASE+PRK QKRKRAK Q S S E++    S+ +  GCL+ LK++R +G Q  A  
Sbjct: 121 GEGHDASEVPRKQQKRKRAKPQRSDSPEEVDIQQSIGSPDGCLTFLKQARANGTQRHATG 180

Query: 179 KRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVS 238
           KRTPR PV  S  +DDR+   P NK+ R+   DANDD VAH  ALALT+AS+RGGSP+VS
Sbjct: 181 KRTPRVPVQTSFMRDDREGSTPPNKRARKQ-FDANDD-VAHFLALALTDASRRGGSPKVS 238

Query: 239 QSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRAR 298
           +SP+++TE   SSP++ W KM    ++       ++ EE    +R   R+ ++   T   
Sbjct: 239 ESPNRRTELSDSSPIKSWGKMSRTRKSQSKHCGSSIFEEWMESSR--ERKLDSDKDTTL- 295

Query: 299 KSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGSE 358
             LMDME  G +E  RKGK+ Y+K++KVEE   + SDD GEACS T +GL S+  +  + 
Sbjct: 296 --LMDMERAGEMEAPRKGKRVYKKRVKVEEAECNDSDDNGEACSAT-QGLRSKSQRRKAA 352

Query: 359 ISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSL-MLPDSTMESESSVQLKEE 417
           I  ++  + P +  +KR  K   G    A +ALQ LA+LS  MLP + MESE S QLKEE
Sbjct: 353 IEASREKYSP-RSPKKRDDKHTSG----AFDALQALAELSASMLPANLMESELSAQLKEE 407

Query: 418 RTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVE 477
           RT +D+D+KSS PE TSTS   EK  ++ P +  L+ I+  E+   RKSK  R    D +
Sbjct: 408 RTEYDMDEKSSTPEATSTSSHGEKA-NVEPDDSLLHAISSVENANKRKSKPSRLVSTDCD 466

Query: 478 TVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFAS--K 535
            V   K QP+   S+ KRK       K+   EA  +    +++  + + ++ N   S  K
Sbjct: 467 DVPTGKLQPQTSGSLRKRK------PKVLGDEAPAEFSQNKSINKKELPQDENNMKSLVK 520

Query: 536 GKRTSQNSAQSKQWKPGRVLEGSSV-NDQNRASIDLVAPTGQAPVASPASSPTKHQSRRK 594
            KR  Q  AQSKQ K  + LE S++ +D+ R  +D+VA   Q   + P S   K  +RRK
Sbjct: 521 TKRAGQVPAQSKQMKTVKALEESAITSDKKRPGMDIVASPKQVSDSGPTSLSQKPPNRRK 580

Query: 595 MDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFY 654
             L++ L  K  K SE + K   +  SLS+++ LL  K+KL+  LS    RR C FEWFY
Sbjct: 581 KSLQKSLQEK-AKSSETTHKAARSSRSLSEQELLL--KDKLATSLSFPFARRRCIFEWFY 637

Query: 655 SAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQ 714
           SAID+PWFS  EFV+YLNHVGLGHIPRLTR+EW VI+SSLG+PRR S+RFLH+EREKLKQ
Sbjct: 638 SAIDHPWFSKMEFVDYLNHVGLGHIPRLTRLEWSVIKSSLGRPRRFSERFLHEEREKLKQ 697

Query: 715 YRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQ 746
           YRES                            RVIAIHPKTRE+HDG +LT+DH+KC V 
Sbjct: 698 YRESVRKHYTELRTGAREGLPTDLARPLAVGNRVIAIHPKTREIHDGKILTVDHNKCNVL 757

Query: 747 FDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFA 806
           FD  +LGVE VMDID MP NPL+ MPE LRRQI  DK  ++ KE Q++G+ N G  +LF 
Sbjct: 758 FD--DLGVELVMDIDCMPLNPLEYMPEGLRRQI--DKCLSMKKEAQLSGNTNLGVSVLFP 813

Query: 807 SDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTV-----PQIQ 861
             G LE      N    Q  GDM   +   K ++++  S +Q  +  + T       +IQ
Sbjct: 814 PCG-LENVSFSMNPPLNQ--GDMIAPILHGK-VSSNTSSPRQTNHSYITTYNKAKEAEIQ 869

Query: 862 AREATVRALSEEALLMEL 879
             +A   AL E+ +  E+
Sbjct: 870 RAQALQHALDEKEMEPEM 887



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 126/171 (73%), Gaps = 9/171 (5%)

Query: 1002 EIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQ 1061
            EIV GS+ +A  MVDAA+KA SSVKEGED  T I EAL+ + K QL    R S+++  E 
Sbjct: 889  EIVKGSKTRAQAMVDAAIKAASSVKEGEDVNTMIQEALELVGKNQLL---RSSMVKHHEH 945

Query: 1062 VNGSL-GHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCT 1120
            VNGS+  HHN   S   +P   N+ +    QD S+KN AQ+PSELITSCVAT LMIQ CT
Sbjct: 946  VNGSIEHHHNPSPSNGSEPVANNDLNS---QDGSEKN-AQMPSELITSCVATWLMIQMCT 1001

Query: 1121 ER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            ER + PADVAQ+ID+AV+SL P CPQNLPIYREI+ CMGRIKTQI++L+PT
Sbjct: 1002 ERQYPPADVAQLIDAAVTSLQPRCPQNLPIYREIQTCMGRIKTQIMSLVPT 1052


>gi|7596773|gb|AAF64544.1| unknown protein [Arabidopsis thaliana]
          Length = 1055

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/921 (47%), Positives = 573/921 (62%), Gaps = 73/921 (7%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDV-ISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNY 59
           MAP RKSRSVNKR+ NE SP KD   S     +KKKLSDKLGPQW++ EL+RFY+AYR +
Sbjct: 1   MAPVRKSRSVNKRFTNETSPRKDAGKSKKNKLRKKKLSDKLGPQWTRLELERFYDAYRKH 60

Query: 60  GKDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
           G++W++VAA +RN RS +MVEAL+NMNRAYLSLPEGTASV GLIAMMTDHY+VMEGS SE
Sbjct: 61  GQEWRRVAAAIRNSRSVDMVEALFNMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSGSE 120

Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRID---GNQPR 175
            E +DASE+PRK QKRKRAK Q S S E++    S+ +  GCL+ LK++R +   G Q  
Sbjct: 121 GEGHDASEVPRKQQKRKRAKPQRSDSPEEVDIQQSIGSPDGCLTFLKQARANVHVGTQRH 180

Query: 176 AVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSP 235
           A  KRTPR PV  S  +DDR+   P NK+ R+   DANDD VAH  ALALT+AS+RGGSP
Sbjct: 181 ATGKRTPRVPVQTSFMRDDREGSTPPNKRARKQ-FDANDD-VAHFLALALTDASRRGGSP 238

Query: 236 QVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYT 295
           +VS+SP+++TE   SSP++ W KM    ++       ++ EE    +R   R+ ++   T
Sbjct: 239 KVSESPNRRTELSDSSPIKSWGKMSRTRKSQSKHCGSSIFEEWMESSR--ERKLDSDKDT 296

Query: 296 RARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKV 355
                LMDME  G +E  RKGK+ Y+K++KVEE   + SDD GEACS T+ GL S+  + 
Sbjct: 297 TL---LMDMERAGEMEAPRKGKRVYKKRVKVEEAECNDSDDNGEACSATQ-GLRSKSQRR 352

Query: 356 GSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSL-MLPDSTMESESSVQL 414
            + I  ++  + P +  +KR  K   G    A +ALQ LA+LS  MLP + MESE S QL
Sbjct: 353 KAAIEASREKYSP-RSPKKRDDKHTSG----AFDALQALAELSASMLPANLMESELSAQL 407

Query: 415 KEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGN 474
           KEERT +D+D+KSS PE TSTS   EK  ++ P +  L+ I+  E+   RKSK  R    
Sbjct: 408 KEERTEYDMDEKSSTPEATSTSSHGEKA-NVEPDDSLLHAISSVENANKRKSKPSRLVST 466

Query: 475 DVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFAS 534
           D + V   K QP+   S+ KRK       K+   EA  +    +++  + + ++ N   S
Sbjct: 467 DCDDVPTGKLQPQTSGSLRKRK------PKVLGDEAPAEFSQNKSINKKELPQDENNMKS 520

Query: 535 --KGKRTSQNSAQSKQWKPGRVLEGSSV-NDQNRASIDLVAPTGQAPVASPASSPTKHQS 591
             K KR  Q  AQSKQ K  + LE S++ +D+ R  +D+VA   Q   + P S   K  +
Sbjct: 521 LVKTKRAGQVPAQSKQMKTVKALEESAITSDKKRPGMDIVASPKQVSDSGPTSLSQKPPN 580

Query: 592 RRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFE 651
           RRK  L++ L  K  K SE + K   +  SLS+++ LL  K+KL+  LS    RR C FE
Sbjct: 581 RRKKSLQKSLQEK-AKSSETTHKAARSSRSLSEQELLL--KDKLATSLSFPFARRRCIFE 637

Query: 652 WFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREK 711
           WFYSAID+PWFS  EFV+YLNHVGLGHIPRLTR+EW VI+SSLG+PRR S+RFLH+EREK
Sbjct: 638 WFYSAIDHPWFSKMEFVDYLNHVGLGHIPRLTRLEWSVIKSSLGRPRRFSERFLHEEREK 697

Query: 712 LKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKC 743
           LKQYRES                            RVIAIHPKTRE+HDG +LT+DH+KC
Sbjct: 698 LKQYRESVRKHYTELRTGAREGLPTDLARPLAVGNRVIAIHPKTREIHDGKILTVDHNKC 757

Query: 744 RVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPM 803
            V FD  +LGVE VMDID MP NPL+ MPE LRRQI  DK  ++ KE Q++G+ N G  +
Sbjct: 758 NVLFD--DLGVELVMDIDCMPLNPLEYMPEGLRRQI--DKCLSMKKEAQLSGNTNLGVSV 813

Query: 804 LFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTV-----P 858
           LF   G LE      N    Q  GDM   +   K ++++  S +Q  +  + T       
Sbjct: 814 LFPPCG-LENVSFSMNPPLNQ--GDMIAPILHGK-VSSNTSSPRQTNHSYITTYNKAKEA 869

Query: 859 QIQAREATVRALSEEALLMEL 879
           +IQ  +A   AL E+ +  E+
Sbjct: 870 EIQRAQALQHALDEKEMEPEM 890



 Score =  192 bits (489), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 126/171 (73%), Gaps = 9/171 (5%)

Query: 1002 EIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQ 1061
            EIV GS+ +A  MVDAA+KA SSVKEGED  T I EAL+ + K QL    R S+++  E 
Sbjct: 892  EIVKGSKTRAQAMVDAAIKAASSVKEGEDVNTMIQEALELVGKNQLL---RSSMVKHHEH 948

Query: 1062 VNGSL-GHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCT 1120
            VNGS+  HHN   S   +P   N+ +    QD S+KN AQ+PSELITSCVAT LMIQ CT
Sbjct: 949  VNGSIEHHHNPSPSNGSEPVANNDLNS---QDGSEKN-AQMPSELITSCVATWLMIQMCT 1004

Query: 1121 ER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            ER + PADVAQ+ID+AV+SL P CPQNLPIYREI+ CMGRIKTQI++L+PT
Sbjct: 1005 ERQYPPADVAQLIDAAVTSLQPRCPQNLPIYREIQTCMGRIKTQIMSLVPT 1055


>gi|297736887|emb|CBI26088.3| unnamed protein product [Vitis vinifera]
          Length = 1127

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/922 (44%), Positives = 557/922 (60%), Gaps = 104/922 (11%)

Query: 314  RKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGKVGSEISNAKNDHLPLQM 371
            +KGKKFY KK +VE+  N+  DD  EACSGTEEG  LS+ +G++ +E+ +AK      Q 
Sbjct: 245  QKGKKFYGKKAEVEDSGNNHLDDIKEACSGTEEGQKLSAVRGRLETEVVDAKIVRSSSQG 304

Query: 372  QRKRSKKLFFG-DESTALNALQTLADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAP 430
             RKRSKK+ FG DE TA +ALQTLADLSLM+P + +++ESSV +K E    DI D+S   
Sbjct: 305  TRKRSKKVLFGGDEGTAFDALQTLADLSLMMPATNIDTESSVPVKGEN--IDIVDESKTL 362

Query: 431  EETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRK-SKLGRYSGNDVETVAEVKEQPEPP 489
            +    +H +EK + LG K K  N++    +I P K SKL ++S  D+ +  E+KE P+P 
Sbjct: 363  DVMPVNHRREKPRTLGAKVKGNNSVPGV-NIPPLKASKLEKFSALDISSFPEIKEGPQPS 421

Query: 490  NSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQW 549
             + S+++++     K   SE  +D++++ + ++EA  +E  K  SKGKR+S +++  KQ 
Sbjct: 422  ITGSRKRKQKSFGFKGMESETHSDSNLSVSQKTEAT-DEGKKPVSKGKRSSHSASHPKQG 480

Query: 550  KPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFS 609
            K  +  E  S + + R   + +    Q   A+    PTK +SRRKMD ++    K+++F+
Sbjct: 481  KLVKPPERCSSSTETRREENYLVVPAQVSSANQVHLPTKVRSRRKMDTQKPSFQKDLRFA 540

Query: 610  ENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVE 669
            EN +  QP     S +DR  ++KEKLS CLS   VRRWC FEWFYSAIDYPWF+ +EFVE
Sbjct: 541  ENYVNDQPIIPIPSVQDRARTLKEKLSNCLSCYRVRRWCAFEWFYSAIDYPWFAKKEFVE 600

Query: 670  YLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES----------- 718
            YL+HVGLGH+PRLTRVEWGVIRSSLGKPRR S++FL +E+EKL QYR+S           
Sbjct: 601  YLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEKEKLNQYRDSVRTHYTELRAG 660

Query: 719  -----------------RVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDID 761
                             RV+A+HP+TRE+HDG VLT+D   CRVQF+RPELGVE VMDID
Sbjct: 661  TREGLPTDLAPPLSVGQRVVALHPRTREIHDGKVLTVDRTWCRVQFERPELGVELVMDID 720

Query: 762  SMPSNPLDNMPEALRRQ-ISADKFSAISKELQVNGHPN------FG----SPMLFASDG- 809
             MP NPL+NMP +L +  ++ +KF     EL++NG P       +G    S  +   DG 
Sbjct: 721  CMPLNPLENMPASLTKHSLAVNKFFENVSELKMNGGPKDRKITEYGKFSTSENMENVDGP 780

Query: 810  -HLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVR 868
             HL  +    N L KQ K    +A   AK  + +  ++QQ A  Q   + Q Q +EA V+
Sbjct: 781  SHLSPSTYPINNLLKQTKAGSTNANFHAKVGSGEAANSQQVANSQSIILAQNQGKEADVQ 840

Query: 869  ALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQ 920
            ALSE        EA+L EL+  N+++ E+   G+SSLK+S+  KK  A +LVQL E    
Sbjct: 841  ALSELTRALDKKEAVLCELRRMNDEVSENYKDGDSSLKESDLFKKQYAALLVQLNEV--- 897

Query: 921  ACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSWPMH 980
                                            D Q SSAL+++RQ NT+  +S  +WP  
Sbjct: 898  --------------------------------DEQVSSALIRLRQRNTYRGNSPVTWPKP 925

Query: 981  PANV-------KMLD-NSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAY 1032
             A++          D +S  +QESG+ V EIV  SR KA TMVDAA++AMSS+KE  +  
Sbjct: 926  MASLADPGGLMSSFDCSSCYTQESGTHVVEIVESSRKKARTMVDAAMQAMSSLKEEGNNV 985

Query: 1033 TKIGEALDHIDKRQLTSDPRVSVIRS---PEQVNGSLGHHNHFVSGTCDPQPTNNASGTK 1089
             +I +A+D ++ R L  D  +S +RS   P+ ++GSL   + F S T +P   + A   K
Sbjct: 986  ERIEDAIDFVNNRLLVDDSGMSTMRSSAAPDPLHGSLASQDQFTSCTSNPLSGSQAPDLK 1045

Query: 1090 LQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT-PADVAQIIDSAVSSLHPCCPQNLP 1148
            L   SD NEAQIP+ELIT CVATLLMIQ CTER   PA+VAQI+DSAV+SL PCC QNLP
Sbjct: 1046 LNISSDDNEAQIPAELITHCVATLLMIQKCTERQFPPANVAQILDSAVTSLQPCCSQNLP 1105

Query: 1149 IYREIEMCMGRIKTQILALIPT 1170
            IY EI+ CMG I+ QILALIPT
Sbjct: 1106 IYAEIQKCMGIIRNQILALIPT 1127



 Score =  290 bits (743), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/245 (62%), Positives = 184/245 (75%), Gaps = 9/245 (3%)

Query: 1   MAPTRKSRSVNKR--YANEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYR 57
           MAPT+KSR+V KR  Y +++SP KD    +KS  +K+KLSD LG QWSK EL+RFYEAYR
Sbjct: 1   MAPTKKSRTVTKRFSYVSDISPKKDGEKANKSGLRKRKLSDMLGSQWSKEELERFYEAYR 60

Query: 58  NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
            +GKDWKKVA+ VRNRS EMVEALY MNRAYLSLPEGTASVVGLIAMMTDHY V+EGSDS
Sbjct: 61  KHGKDWKKVASVVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYTVLEGSDS 120

Query: 118 ERESNDASEMPRKSQKRKRAKVQLSASKE------DISQSWSMAATGGCLSLLKRSRIDG 171
            +ESND +   RK  KR R K++ ++SKE      D+SQS   A++ GCLSLLK+ R  G
Sbjct: 121 GQESNDGTGTSRKPPKRGRGKIRPNSSKELDGHFPDLSQSPLAASSYGCLSLLKKKRSGG 180

Query: 172 NQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQR 231
           ++PRAV KRTPRFPVSYS  KD+   Y    ++  +  VD+ DD+VAH  AL L +ASQR
Sbjct: 181 SRPRAVGKRTPRFPVSYSYDKDNGQKYFSPTRQGLKLKVDSVDDDVAHEVALTLAKASQR 240

Query: 232 GGSPQ 236
           GGSPQ
Sbjct: 241 GGSPQ 245


>gi|359487806|ref|XP_003633652.1| PREDICTED: protein ALWAYS EARLY 2-like [Vitis vinifera]
          Length = 1623

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/828 (48%), Positives = 479/828 (57%), Gaps = 182/828 (21%)

Query: 383  DESTALNALQTLADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKI 442
            DES+AL+ALQTLADLSLM+PDS +ESESS+QLKEE+   D     +  E    SH ++K 
Sbjct: 936  DESSALDALQTLADLSLMMPDSAVESESSIQLKEEKITLD-----NVHEAMFASHQRDKN 990

Query: 443  KHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLS 502
            K +  KE+ +  I   E     K + GR S  DV  ++E +++PE  N   KRK KS+ S
Sbjct: 991  KLMVAKERVVKAIPGVEVTASIKYEHGRDSAIDVNALSEAQQRPESNNKQLKRKDKSLAS 1050

Query: 503  KKISNSEAVTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVND 562
            K                    A+AEE NK   KG+   Q +A SKQWK  R LE S  +D
Sbjct: 1051 K--------------------ALAEEENKSMVKGRHAGQIAALSKQWKSVRPLEHSLNSD 1090

Query: 563  QNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSL 622
            Q  A  DL   T     AS  + PTK +SRRKM LK+ L  KEMK  ENS   Q +K S 
Sbjct: 1091 QKEARNDLAGST-----ASHVNLPTKQRSRRKMHLKKTLIQKEMKSPENSFSKQSSKYST 1145

Query: 623  SQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRL 682
            S +     +K+K+S  LSS M RRWCTFEWFYSAIDYPWF  +EFVEYL+HVGLGHI RL
Sbjct: 1146 SLQYSTDYLKKKISCSLSSYMARRWCTFEWFYSAIDYPWFVKKEFVEYLDHVGLGHIQRL 1205

Query: 683  TRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES------------------------ 718
            +RVEW VIRSSLGKPRR S+RFLH+E+EKLKQYR+S                        
Sbjct: 1206 SRVEWDVIRSSLGKPRRFSERFLHEEKEKLKQYRKSVRTHYTELRTGAREGLPRDLARPL 1265

Query: 719  ----RVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
                RVIA+HPKTRE+H+GSVLT+DHDKC VQFDR E+GVEFVMDID MPS+PLDNMPEA
Sbjct: 1266 SVGQRVIALHPKTREVHNGSVLTVDHDKCMVQFDRAEIGVEFVMDIDCMPSDPLDNMPEA 1325

Query: 775  LRRQIS-ADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHAL 833
            LRRQ S   +F   SKE +V    N  +PM               N+L KQAK       
Sbjct: 1326 LRRQNSTVGQFLVNSKEQKVRHLVNAHTPM---------------NSLIKQAK------- 1363

Query: 834  PQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSEEALLMELKNTNNDILESQNGG 893
                                                   EALLMEL++ NND+L +++G 
Sbjct: 1364 ---------------------------------------EALLMELRHANNDVLGNEDG- 1383

Query: 894  ESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFD 953
               LKDSE LKKH A V                                           
Sbjct: 1384 --FLKDSESLKKHCAMV------------------------------------------- 1398

Query: 954  MQASSALLQVRQCNTHPESSRPSW---------PMHPANVKMLDN-SHVSQESGSAVAEI 1003
               SSALL +RQC  +P  + P W         P+ P +   LDN S  S E G  V EI
Sbjct: 1399 ---SSALLYLRQCEAYPGKTLPPWLTTSTISSGPLMPPSS--LDNPSSTSLEPGFNVGEI 1453

Query: 1004 VNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVN 1063
            V GSR KAH MV AA+KA++S+K+GE+A+T+IG+ALD + K+QL SD  VSV+R  + VN
Sbjct: 1454 VLGSRSKAHKMVHAAMKAIASMKQGEEAFTRIGDALDSMHKQQLRSDSGVSVLRVLDPVN 1513

Query: 1064 GSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER- 1122
            GS  H N   S T +P  T++ASG KL + S K EA I SELITSCVA LLMIQTCTER 
Sbjct: 1514 GSFAHPNQLTSFTSEPLLTSHASGPKLPNDSGKIEAPIASELITSCVAALLMIQTCTERQ 1573

Query: 1123 HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            + P+DVAQI+DSA+ SLHP CPQNLPIYREIEMCMGRIKTQILAL+PT
Sbjct: 1574 YPPSDVAQILDSAIISLHPGCPQNLPIYREIEMCMGRIKTQILALVPT 1621



 Score =  234 bits (598), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 174/451 (38%), Positives = 222/451 (49%), Gaps = 103/451 (22%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKK-------------------------- 65
           +K+KLSD LG QWSK EL+ FYEAYR YGKDWKK                          
Sbjct: 288 KKRKLSDMLGSQWSKEELEHFYEAYRKYGKDWKKVAGVVRNRSLEMVEALYNMNRAYLSL 347

Query: 66  ---------------------VAAQVRNRSAEMVEALYNMNRAY--LSLPEGTASVVGLI 102
                                V   +R ++  +   L  +N +   L+L EG    +  +
Sbjct: 348 PEGTASVVGLIAMMTDHYNVLVLGDLRQKAVRVFSKLDGINFSVNALALWEGLGMAISWV 407

Query: 103 AMMTDHYNVMEG--------------------------SDSERESNDASEMPRKSQKRKR 136
           ++      V +G                             + ESND S  PRK+QK  R
Sbjct: 408 SLGGRAVTVHDGLFIEQREFMLSDMVSSFMQITGLVNQGGGDNESNDVSGTPRKTQKPVR 467

Query: 137 AKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGN---------------------QPR 175
            KV LS SKE++ Q  S+A   GCLSLLKRS  DG                      +P 
Sbjct: 468 GKVHLSISKEELLQPPSVA-NDGCLSLLKRSLSDGGDLDRFDDSVETGRGIVIGTGIRPH 526

Query: 176 AVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSP 235
           AV+KRTPRFPVS S KK + + Y  LNK   RS +D  DDEVAHVAAL LTEAS R GS 
Sbjct: 527 AVRKRTPRFPVSCSYKKGNEESYFSLNKVSLRSDMDTTDDEVAHVAALTLTEASLREGS- 585

Query: 236 QVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYT 295
             SQ+P ++TEH K+SPVQ  ++M  P +         + +E   E  + +R  ENG Y 
Sbjct: 586 HASQAPFRRTEHMKASPVQSRERM--PLQMVQTKIHGIVTDEDYFEGNLESRGAENGDYA 643

Query: 296 RARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTE-EGLSSRKGK 354
               SLMD E VGTV V ++GKKF   + KVEE+ N+  DD  EACS TE   ++  K K
Sbjct: 644 GDTCSLMDSECVGTV-VLQEGKKFCDNE-KVEEIGNNQFDDCREACSDTEGHNMNPVKRK 701

Query: 355 VGSEISNAKNDHLPLQMQRKRSKKLFFGDES 385
           + +E++NAK +      QRKRSKKLFFGD S
Sbjct: 702 IDTEVTNAKIEPSSPCGQRKRSKKLFFGDIS 732


>gi|222625428|gb|EEE59560.1| hypothetical protein OsJ_11848 [Oryza sativa Japonica Group]
          Length = 997

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/925 (43%), Positives = 546/925 (59%), Gaps = 102/925 (11%)

Query: 6   KSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYRNYGKD 62
           K R+VNKRYA  NE    KD  +  KSK +KKKLSD LG QWSK EL+RFY +YR YGKD
Sbjct: 94  KVRNVNKRYAKINEDWQDKDATNVHKSKVRKKKLSDMLGSQWSKDELERFYGSYRKYGKD 153

Query: 63  WKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESN 122
           W+KVA+ +R+R++EMVEALYNMN+AYLSLPEGTA+  GLIAMMTDHYN+++GS+S+ ESN
Sbjct: 154 WRKVASSIRDRTSEMVEALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNSDHESN 213

Query: 123 DASEMPRKSQKRKRAKVQLSASKEDIS-----QSWSMAATGGCLSLLKRSR----IDGNQ 173
            + +  RK +KR RAK Q  +   D       QS   +++ GCLSLLK+ R      GN+
Sbjct: 214 GSPKTSRKPRKRGRAKFQSVSKASDTQHPDQLQSQPASSSYGCLSLLKKKRSGDLFVGNK 273

Query: 174 PRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAN-DDEVAHVAALALTEASQRG 232
           PRAV KRTPR PV+   ++D++     +   +R++  D N DDE AHVAALAL E  QRG
Sbjct: 274 PRAVGKRTPRVPVASMYQRDEK-----IGPTNRQAKPDGNGDDEGAHVAALALAEVFQRG 328

Query: 233 GSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENG 292
           GSPQ SQ+P +  +    SPV+  D+    +E           +   PE  + +R  E G
Sbjct: 329 GSPQDSQTPGRSGDRMFLSPVKSTDRKNADSEMGSSKLHGFQVDADFPEGSLGSREAETG 388

Query: 293 AYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRK 352
            Y +    LM+ EG  + +  +K K+  R++ K     +   +D+ EACSGTEEG S++K
Sbjct: 389 DYPKYASYLMNNEGSASGKSQQKVKRTQRRRKKAARKTDDQLEDDREACSGTEEGHSAKK 448

Query: 353 GKVGSEISN-AKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLPDSTMESE 409
            K  SE++   +    P +   KR+++LFFGDES+AL+AL TLADLS  ++ P S +ESE
Sbjct: 449 TKDESEVNGLGRKGRWPSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESE 508

Query: 410 SSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLG 469
           SS Q+K+E    D D+K S P   S    K+K K    K K  + +  A+    +K+++ 
Sbjct: 509 SSAQIKDENKDNDSDEKPSMPAAVSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIA 568

Query: 470 RYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEH 529
           +    D   ++E K+        +++K++   + KIS  E        + +E   V+ E 
Sbjct: 569 KVPNRDGIAISETKQLDSKFGVQTEKKKRKPSAAKISKDE----KSALKDVEKTEVSAEE 624

Query: 530 NKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKH 589
            K +S     + ++ Q                          A T QA +AS      K 
Sbjct: 625 GKVSSNKAMDTVDTTQG-------------------------ATTQQADLAS------KG 653

Query: 590 QSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
           +SRRK+ + + L+  E + ++ +   + +K S +  + ++ +K+ LS CLSS ++RRWCT
Sbjct: 654 RSRRKIGILKALAP-ECRPTDGADDLRSDKFSYAVNN-VIDLKDSLSHCLSSRLLRRWCT 711

Query: 650 FEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDER 709
           FEWFYSAID+PWF   EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKPRRLSK+FL +ER
Sbjct: 712 FEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEER 771

Query: 710 EKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHD 741
           EKL QYRES                            RVIA HP+TRELHDG+VL +DH+
Sbjct: 772 EKLAQYRESVRQHYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHN 831

Query: 742 KCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ---------ISADKFSAISKELQ 792
           +CRVQFDRPELGVEFVMDID MP +PL+N PE+LRRQ          S  KF   SKEL 
Sbjct: 832 RCRVQFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELG 891

Query: 793 VNGHPNFGSPMLF----ASDGHLEKAPILPNTLQKQAKGDMNHALPQ-AKSLATDIVSAQ 847
             G   F S + F    A+       PI  NTL KQAKGD   ++ Q   ++    V+AQ
Sbjct: 892 TGGPTRFTSNVCFDGGDATSNIPSNYPI--NTLMKQAKGDTVDSIAQAKVAVNEVAVAAQ 949

Query: 848 QAAYGQLCTVPQIQAREATVRALSE 872
           Q+ Y Q CT+ QIQ REA +RAL+E
Sbjct: 950 QSMYSQPCTLSQIQEREADIRALAE 974


>gi|359477292|ref|XP_002276298.2| PREDICTED: protein ALWAYS EARLY 3-like [Vitis vinifera]
          Length = 1146

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/956 (42%), Positives = 550/956 (57%), Gaps = 154/956 (16%)

Query: 310  VEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGKVGSEISNAKNDHL 367
            +EV +KGKKFY KK +VE+  N+  DD  EACSGTEEG  LS+ +G++ +E+ +AK    
Sbjct: 250  IEVQQKGKKFYGKKAEVEDSGNNHLDDIKEACSGTEEGQKLSAVRGRLETEVVDAKIVRS 309

Query: 368  PLQMQRKRSKKLFFG-DESTALNALQTLADLSLMLPDSTMES------------------ 408
              Q  RKRSKK+ FG DE TA +ALQTLADLSLM+P + +++                  
Sbjct: 310  SSQGTRKRSKKVLFGGDEGTAFDALQTLADLSLMMPATNIDTGYGLISQSLADTIMPMES 369

Query: 409  ------------ESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTIT 456
                        ESSV +K E    DI D+S   +    +H +EK + LG K K  N++ 
Sbjct: 370  LFAPSFQLLDYLESSVPVKGEN--IDIVDESKTLDVMPVNHRREKPRTLGAKVKGNNSVP 427

Query: 457  EAEDIIPRK-SKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTH 515
               +I P K SKL ++S  D+ +  E+KE P+P  + S+++++     K   SE  +D++
Sbjct: 428  -GVNIPPLKASKLEKFSALDISSFPEIKEGPQPSITGSRKRKQKSFGFKGMESETHSDSN 486

Query: 516  MTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTG 575
            ++ + ++EA  +E  K  SKGKR+S +++  KQ K  +  E  S + + R   + +    
Sbjct: 487  LSVSQKTEAT-DEGKKPVSKGKRSSHSASHPKQGKLVKPPERCSSSTETRREENYLVVPA 545

Query: 576  QAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKL 635
            Q   A+    PTK +SRRKMD ++    K+++F+EN                     EKL
Sbjct: 546  QVSSANQVHLPTKVRSRRKMDTQKPSFQKDLRFAENY--------------------EKL 585

Query: 636  SGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLG 695
            S CLS   VRRWC FEWFYSAIDYPWF+ +EFVEYL+HVGLGH+PRLTRVEWGVIRSSLG
Sbjct: 586  SNCLSCYRVRRWCAFEWFYSAIDYPWFAKKEFVEYLDHVGLGHVPRLTRVEWGVIRSSLG 645

Query: 696  KPRRLSKRFLHDEREKLKQYRES----------------------------RVIAIHPKT 727
            KPRR S++FL +E+EKL QYR+S                            RV+A+HP+T
Sbjct: 646  KPRRFSEQFLKEEKEKLNQYRDSVRTHYTELRAGTREGLPTDLAPPLSVGQRVVALHPRT 705

Query: 728  RELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISADKFSA 786
            RE+HDG VLT+D   CRVQF+RPELGVE VMDID MP NPL+NMP +L +  ++ +KF  
Sbjct: 706  REIHDGKVLTVDRTWCRVQFERPELGVELVMDIDCMPLNPLENMPASLTKHSLAVNKFFE 765

Query: 787  ISKELQVNGHPN------FG----SPMLFASDG--HLEKAPILPNTLQKQAKGDMNHALP 834
               EL++NG P       +G    S  +   DG  HL  +    N L KQ K    +A  
Sbjct: 766  NVSELKMNGGPKDRKITEYGKFSTSENMENVDGPSHLSPSTYPINNLLKQTKAGSTNANF 825

Query: 835  QAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDI 886
             AK  + +  ++QQ A  Q   + Q Q +EA V+ALSE        EA+L EL+  N+++
Sbjct: 826  HAKVGSGEAANSQQVANSQSIILAQNQGKEADVQALSELTRALDKKEAVLCELRRMNDEV 885

Query: 887  LESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRR 946
             E+   G+SSLK+S+  KK  A +LVQL E                              
Sbjct: 886  SENYKDGDSSLKESDLFKKQYAALLVQLNEV----------------------------- 916

Query: 947  SLIDCFDMQASSALLQVRQCNTHPESSRPSWPMHPANV-------KMLD-NSHVSQESGS 998
                  D Q SSAL+++RQ NT+  +S  +WP   A++          D +S  +QESG+
Sbjct: 917  ------DEQVSSALIRLRQRNTYRGNSPVTWPKPMASLADPGGLMSSFDCSSCYTQESGT 970

Query: 999  AVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS 1058
             V EIV  SR KA TMVDAA++AMSS+KE  +   +I +A+D ++ R L  D  +S +RS
Sbjct: 971  HVVEIVESSRKKARTMVDAAMQAMSSLKEEGNNVERIEDAIDFVNNRLLVDDSGMSTMRS 1030

Query: 1059 ---PEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLM 1115
               P+ ++GSL   + F S T +P   + A   KL   SD NEAQIP+ELIT CVATLLM
Sbjct: 1031 SAAPDPLHGSLASQDQFTSCTSNPLSGSQAPDLKLNISSDDNEAQIPAELITHCVATLLM 1090

Query: 1116 IQTCTERHT-PADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            IQ CTER   PA+VAQI+DSAV+SL PCC QNLPIY EI+ CMG I+ QILALIPT
Sbjct: 1091 IQKCTERQFPPANVAQILDSAVTSLQPCCSQNLPIYAEIQKCMGIIRNQILALIPT 1146



 Score =  298 bits (762), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 159/258 (61%), Positives = 193/258 (74%), Gaps = 10/258 (3%)

Query: 1   MAPTRKSRSVNKR--YANEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYR 57
           MAPT+KSR+V KR  Y +++SP KD    +KS  +K+KLSD LG QWSK EL+RFYEAYR
Sbjct: 1   MAPTKKSRTVTKRFSYVSDISPKKDGEKANKSGLRKRKLSDMLGSQWSKEELERFYEAYR 60

Query: 58  NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
            +GKDWKKVA+ VRNRS EMVEALY MNRAYLSLPEGTASVVGLIAMMTDHY V+EGSDS
Sbjct: 61  KHGKDWKKVASVVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYTVLEGSDS 120

Query: 118 ERESNDASEMPRKSQKRKRAKVQLSASKE------DISQSWSMAATGGCLSLLKRSRIDG 171
            +ESND +   RK  KR R K++ ++SKE      D+SQS   A++ GCLSLLK+ R  G
Sbjct: 121 GQESNDGTGTSRKPPKRGRGKIRPNSSKELDGHFPDLSQSPLAASSYGCLSLLKKKR-SG 179

Query: 172 NQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQR 231
           ++PRAV KRTPRFPVSYS  KD+   Y    ++  +  VD+ DD+VAH  AL L +ASQR
Sbjct: 180 SRPRAVGKRTPRFPVSYSYDKDNGQKYFSPTRQGLKLKVDSVDDDVAHEVALTLAKASQR 239

Query: 232 GGSPQVSQSPHKKTEHGK 249
           GGSPQVSQ+P +  + GK
Sbjct: 240 GGSPQVSQTPIEVQQKGK 257


>gi|218193381|gb|EEC75808.1| hypothetical protein OsI_12754 [Oryza sativa Indica Group]
          Length = 979

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/925 (43%), Positives = 545/925 (58%), Gaps = 102/925 (11%)

Query: 6   KSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYRNYGKD 62
           K R+VNKRYA  NE    KD  +  KSK +KKKLSD LG QWSK EL+RFY +YR YGKD
Sbjct: 76  KVRNVNKRYAKINEDWQDKDATNVHKSKVRKKKLSDMLGSQWSKDELERFYGSYRKYGKD 135

Query: 63  WKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESN 122
           W+KVA+ +R+R++EMVEALYNMN+AYLSLPEGTA+  GLIAMMTDHYN+++GS+S+ ESN
Sbjct: 136 WRKVASSIRDRTSEMVEALYNMNKAYLSLPEGTATAAGLIAMMTDHYNILDGSNSDHESN 195

Query: 123 DASEMPRKSQKRKRAKVQLSASKEDIS-----QSWSMAATGGCLSLLKRSR----IDGNQ 173
            + +  RK +KR RAK Q  +   D       QS   +++ GCLSLLK+ R      GN+
Sbjct: 196 GSPKTSRKPRKRGRAKFQSVSKASDTQHPDQLQSQPASSSYGCLSLLKKKRSGDFFVGNK 255

Query: 174 PRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAN-DDEVAHVAALALTEASQRG 232
           PRAV KRTPR PV+   ++D++     +   +R++  D N DDE AHVAALAL E  QRG
Sbjct: 256 PRAVGKRTPRVPVASMYQRDEK-----IGPTNRQAKPDGNGDDEGAHVAALALAEVFQRG 310

Query: 233 GSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENG 292
           GSPQ SQ+P +  +    SPV+  D+    +E           +   PE  + +R  E G
Sbjct: 311 GSPQDSQTPGRSGDRMFLSPVKSTDRKNADSEMGSSKLHGFQVDADFPEGSLGSREAETG 370

Query: 293 AYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRK 352
            Y +    LM+ EG  + +  +K K+  R++ K     +   +D+ EACSGTEEG S++K
Sbjct: 371 DYPKYASYLMNNEGSASGKSQQKVKRTQRRRKKAARKTDDQLEDDREACSGTEEGHSAKK 430

Query: 353 GKVGSEISN-AKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LMLPDSTMESE 409
            K  SE++   +    P +   KR+++LFFGDES+AL+AL TLADLS  ++ P S +ESE
Sbjct: 431 TKDESEVNGLGRKGRWPSKKSNKRNRQLFFGDESSALDALHTLADLSVNILQPSSIVESE 490

Query: 410 SSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLG 469
           SS Q+K+E    D D+K S P   S    K+K K    K K  + +  A+    +K+++ 
Sbjct: 491 SSAQIKDENKDNDSDEKPSMPAAVSVLEKKDKSKSTVKKVKRQSELASADMAARKKARIA 550

Query: 470 RYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEH 529
           +    D   ++E K+        +++K++   + KIS  E        + +E   V+ E 
Sbjct: 551 KVPNRDGIAISETKQLDSKFGVQTEKKKRKPSAAKISKDE----KSALKDVEKTEVSAEE 606

Query: 530 NKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKH 589
            K +S     + ++ Q                          A T QA +AS      K 
Sbjct: 607 GKVSSNKAMDTVDTTQG-------------------------ATTQQADLAS------KG 635

Query: 590 QSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
           +SRRK+ + + L+  E + ++ +   + +K S +  + ++ +K+ LS CLSS ++RRWCT
Sbjct: 636 RSRRKIGILKALAP-ECRPTDGADDLRSDKFSYAVNN-VIDLKDSLSHCLSSRLLRRWCT 693

Query: 650 FEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDER 709
           FEWFYSAID+PWF   EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKPRRLSK+FL +ER
Sbjct: 694 FEWFYSAIDFPWFEKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKPRRLSKQFLQEER 753

Query: 710 EKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHD 741
           EKL QYRES                            RVIA HP+TRELHDG+VL +DH+
Sbjct: 754 EKLAQYRESVRQHYAELRSGVREGLPTDLARPLGVGQRVIACHPRTRELHDGNVLNVDHN 813

Query: 742 KCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ---------ISADKFSAISKELQ 792
           +CRVQFDRPELGVEFV DID MP +PL+N PE+LRRQ          S  KF   SKEL 
Sbjct: 814 RCRVQFDRPELGVEFVTDIDCMPLHPLENFPESLRRQNIVNKYYNSFSEAKFEDRSKELG 873

Query: 793 VNGHPNFGSPMLF----ASDGHLEKAPILPNTLQKQAKGDMNHALPQ-AKSLATDIVSAQ 847
             G   F S + F    A+       PI  NTL KQAKGD   ++ Q   ++    V+AQ
Sbjct: 874 TGGPTRFTSNVCFDGGDATSNIPSNYPI--NTLMKQAKGDTVDSIAQAKVAVNEVAVAAQ 931

Query: 848 QAAYGQLCTVPQIQAREATVRALSE 872
           Q+ Y Q CT+ QIQ REA +RAL+E
Sbjct: 932 QSMYSQPCTLSQIQEREADIRALAE 956


>gi|186509791|ref|NP_001118580.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
 gi|332640708|gb|AEE74229.1| protein ALWAYS EARLY 2 [Arabidopsis thaliana]
          Length = 974

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 390/840 (46%), Positives = 512/840 (60%), Gaps = 68/840 (8%)

Query: 77  MVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDASEMPRKSQKRKR 136
           MVEAL+NMNRAYLSLPEGTASV GLIAMMTDHY+VMEGS SE E +DASE+PRK QKRKR
Sbjct: 1   MVEALFNMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSGSEGEGHDASEVPRKQQKRKR 60

Query: 137 AKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQKKDDRD 196
           AK Q S S E++    S+ +  GCL+ LK++R +G Q  A  KRTPR PV  S  +DDR+
Sbjct: 61  AKPQRSDSPEEVDIQQSIGSPDGCLTFLKQARANGTQRHATGKRTPRVPVQTSFMRDDRE 120

Query: 197 DYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKSSPVQIW 256
              P NK+ R+   DANDD VAH  ALALT+AS+RGGSP+VS+SP+++TE   SSP++ W
Sbjct: 121 GSTPPNKRARKQ-FDANDD-VAHFLALALTDASRRGGSPKVSESPNRRTELSDSSPIKSW 178

Query: 257 DKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRARKSLMDMEGVGTVEVHRKG 316
            KM    ++       ++ EE    +R   R+ ++   T     LMDME  G +E  RKG
Sbjct: 179 GKMSRTRKSQSKHCGSSIFEEWMESSR--ERKLDSDKDTTL---LMDMERAGEMEAPRKG 233

Query: 317 KKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGSEISNAKNDHLPLQMQRKRS 376
           K+ Y+K++KVEE   + SDD GEACS T +GL S+  +  + I  ++  + P +  +KR 
Sbjct: 234 KRVYKKRVKVEEAECNDSDDNGEACSAT-QGLRSKSQRRKAAIEASREKYSP-RSPKKRD 291

Query: 377 KKLFFGDESTALNALQTLADLSL-MLPDSTMESESSVQLKEERTAFDIDDKSSAPEETST 435
            K   G    A +ALQ LA+LS  MLP + MESE S QLKEERT +D+D+KSS PE TST
Sbjct: 292 DKHTSG----AFDALQALAELSASMLPANLMESELSAQLKEERTEYDMDEKSSTPEATST 347

Query: 436 SHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKR 495
           S   EK  ++ P +  L+ I+  E+   RKSK  R    D + V   K QP+   S+ KR
Sbjct: 348 SSHGEKA-NVEPDDSLLHAISSVENANKRKSKPSRLVSTDCDDVPTGKLQPQTSGSLRKR 406

Query: 496 KRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFAS--KGKRTSQNSAQSKQWKPGR 553
           K       K+   EA  +    +++  + + ++ N   S  K KR  Q  AQSKQ K  +
Sbjct: 407 K------PKVLGDEAPAEFSQNKSINKKELPQDENNMKSLVKTKRAGQVPAQSKQMKTVK 460

Query: 554 VLEGSSV-NDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENS 612
            LE S++ +D+ R  +D+VA   Q   + P S   K  +RRK  L++ L  K  K SE +
Sbjct: 461 ALEESAITSDKKRPGMDIVASPKQVSDSGPTSLSQKPPNRRKKSLQKSLQEK-AKSSETT 519

Query: 613 LKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLN 672
            K   +  SLS+++ LL  K+KL+  LS    RR C FEWFYSAID+PWFS  EFV+YLN
Sbjct: 520 HKAARSSRSLSEQELLL--KDKLATSLSFPFARRRCIFEWFYSAIDHPWFSKMEFVDYLN 577

Query: 673 HVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES-------------- 718
           HVGLGHIPRLTR+EW VI+SSLG+PRR S+RFLH+EREKLKQYRES              
Sbjct: 578 HVGLGHIPRLTRLEWSVIKSSLGRPRRFSERFLHEEREKLKQYRESVRKHYTELRTGARE 637

Query: 719 --------------RVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMP 764
                         RVIAIHPKTRE+HDG +LT+DH+KC V FD  +LGVE VMDID MP
Sbjct: 638 GLPTDLARPLAVGNRVIAIHPKTREIHDGKILTVDHNKCNVLFD--DLGVELVMDIDCMP 695

Query: 765 SNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQKQ 824
            NPL+ MPE LRRQI  DK  ++ KE Q++G+ N G  +LF   G LE      N    Q
Sbjct: 696 LNPLEYMPEGLRRQI--DKCLSMKKEAQLSGNTNLGVSVLFPPCG-LENVSFSMNPPLNQ 752

Query: 825 AKGDMNHALPQAKSLATDIVSAQQAAYGQLCTV-----PQIQAREATVRALSEEALLMEL 879
             GDM   +   K ++++  S +Q  +  + T       +IQ  +A   AL E+ +  E+
Sbjct: 753 --GDMIAPILHGK-VSSNTSSPRQTNHSYITTYNKAKEAEIQRAQALQHALDEKEMEPEM 809



 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 126/171 (73%), Gaps = 9/171 (5%)

Query: 1002 EIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQ 1061
            EIV GS+ +A  MVDAA+KA SSVKEGED  T I EAL+ + K QL    R S+++  E 
Sbjct: 811  EIVKGSKTRAQAMVDAAIKAASSVKEGEDVNTMIQEALELVGKNQLL---RSSMVKHHEH 867

Query: 1062 VNGSL-GHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCT 1120
            VNGS+  HHN   S   +P   N+ +    QD S+KN AQ+PSELITSCVAT LMIQ CT
Sbjct: 868  VNGSIEHHHNPSPSNGSEPVANNDLNS---QDGSEKN-AQMPSELITSCVATWLMIQMCT 923

Query: 1121 ER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            ER + PADVAQ+ID+AV+SL P CPQNLPIYREI+ CMGRIKTQI++L+PT
Sbjct: 924  ERQYPPADVAQLIDAAVTSLQPRCPQNLPIYREIQTCMGRIKTQIMSLVPT 974


>gi|224123182|ref|XP_002330359.1| predicted protein [Populus trichocarpa]
 gi|222871563|gb|EEF08694.1| predicted protein [Populus trichocarpa]
          Length = 980

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 424/1056 (40%), Positives = 579/1056 (54%), Gaps = 149/1056 (14%)

Query: 171  GNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQ 230
            G++P AV KRTPR PV+YS  K   + Y+   ++  +   DA DD+VAH  ALALTEASQ
Sbjct: 18   GSKPWAVGKRTPRVPVTYSFDKYSEEKYVSPIRQSLKVKADAVDDDVAHEIALALTEASQ 77

Query: 231  RGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREA-LNEEGCPEARILNRRP 289
            RGGSPQVSQ+P +KT+    S  Q  ++M   +E      R + + E GC E  + +   
Sbjct: 78   RGGSPQVSQTPKRKTK--MPSHAQHDEQMHAESEIMSAKLRGSEMEEVGC-ELSLGSTEA 134

Query: 290  ENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG-- 347
            +   Y +              E   KGK++Y ++   E++ ++L DD  EACSGTEEG  
Sbjct: 135  DVVDYVKD-------------ESFWKGKRYYGRRPPAEDLDDNL-DDVREACSGTEEGQK 180

Query: 348  LSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTME 407
            L + +     E+++ K     L    K S+K     E    +AL+ LADLSL LP++ ++
Sbjct: 181  LDAVEELFEMEVADTK-----LVRSSKGSRKRI---EDADFDALEALADLSLRLPETPVD 232

Query: 408  SESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSK 467
            + SSV ++EE+T                   K K+K   P    +  I+       + +K
Sbjct: 233  TGSSVYVEEEKTGIV---------------AKSKLKG-NPSSPGVKPISF------KTTK 270

Query: 468  LGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAE 527
             G+   ++  ++ E K+       + +++R+  +  K+     + D           V  
Sbjct: 271  QGKVFTHNASSIPEEKDVAHQFGPVMRKRRQKHMPSKVRIYVTIADAIFL-------VTT 323

Query: 528  EHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTG-QAPVASPASSP 586
            + N F SKGKR SQ +A SKQ K  +  E +S ++ +   ++  APT  Q   AS  + P
Sbjct: 324  DDNNFMSKGKR-SQYAAHSKQGKLMKSAERTSSSNNHGRELNNSAPTTIQVLSASQFNLP 382

Query: 587  TKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRR 646
            TK +S RK++  + L  ++ K SEN + +Q N    S +DR+L +K  LS CLS  +VRR
Sbjct: 383  TKVRSSRKLNTPKMLVERDSKSSENIVNSQSNTLIPSFQDRVLGLK--LSNCLSRYLVRR 440

Query: 647  WCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLH 706
            WC FEWFYSAIDYPWFS REFVEYL HV LGHIPRLTRVEWGVIRSSLGKPRR S++FL 
Sbjct: 441  WCVFEWFYSAIDYPWFSKREFVEYLEHVRLGHIPRLTRVEWGVIRSSLGKPRRFSEQFLK 500

Query: 707  DEREKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTI 738
            +E+EKL  YRES                            R+IA+HP+T E+HDGS+LT+
Sbjct: 501  EEKEKLNHYRESVREHYAELRTGTREGLPTDLARPLSVGQRIIALHPRTSEIHDGSILTV 560

Query: 739  DHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL-RRQISADKFSAISKELQVNGHP 797
            DH +C VQFDRPELGVEFVMD+D MP NPL+NMP ++    I+ +++     EL+++G P
Sbjct: 561  DHSRCHVQFDRPELGVEFVMDVDCMPLNPLENMPASMIGHNIALNRYMKNLNELKISGQP 620

Query: 798  --NFGSPMLFASDGHLEKAPILPNT-LQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQL 854
                     F+   +LE     P+T L    +G +  +  Q  +   + V+ QQA   Q 
Sbjct: 621  AEKKMEGFKFSPCENLEDNSAPPHTSLNCLYQGGLGGSNSQVNN-GGETVNTQQATNAQP 679

Query: 855  CTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPLKKH 906
                QIQA+EA + ALSE        EA++ ELK+ N+++LESQ  GE+SLKDSE  KKH
Sbjct: 680  SFYAQIQAKEADIHALSELTRALDKKEAVVSELKHMNDEVLESQKRGENSLKDSEAFKKH 739

Query: 907  IATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQC 966
             A VL+QL E N+                                   Q SSAL  +RQ 
Sbjct: 740  YAAVLLQLNEVNE-----------------------------------QVSSALFFLRQR 764

Query: 967  NTH----PESSRPSWPM--HPA-NVKMLDNS-HVSQESGSAVAEIVNGSRLKAHTMVDAA 1018
            NT+    P     S P    PA +    D+S   +QESGS V EIV  SR KA TMVDAA
Sbjct: 765  NTYQGNIPHVLSKSIPNIDDPACHGSSFDSSADDTQESGSHVVEIVESSRTKAQTMVDAA 824

Query: 1019 VKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSP---EQVNGSLGHHNHFVSG 1075
            ++AMSS+K+   +   I +A+D ++ + L  D  V  IRSP     V  S    +   S 
Sbjct: 825  MQAMSSLKKEGSSIESIEDAIDFVNNKLLADDSSVPAIRSPVPASSVQDSPASQDQLSSC 884

Query: 1076 TCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT-PADVAQIIDS 1134
              +P   N+A   K  ++S++NE QIPSELI+ CVATLLMIQ CTER   P+ VAQ++DS
Sbjct: 885  VANPGAINHAPDAKWNNLSNENEVQIPSELISHCVATLLMIQKCTERQFPPSHVAQVLDS 944

Query: 1135 AVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            AV SL PCC  NLPIY EI+  MG IK QILALIPT
Sbjct: 945  AVISLKPCCSVNLPIYAEIQKFMGIIKNQILALIPT 980


>gi|297812957|ref|XP_002874362.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297320199|gb|EFH50621.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 900

 Score =  583 bits (1504), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 386/875 (44%), Positives = 509/875 (58%), Gaps = 152/875 (17%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQ-KKKLSDKLGPQWSKGELQRFYEAYRNY 59
           MAP+RKS+SVNKR+ NE SP  +  S SK+KQ KKKL+DKLGPQW+KGEL RFY+AYR +
Sbjct: 1   MAPSRKSKSVNKRFTNEASPDINGGSASKTKQRKKKLADKLGPQWTKGELARFYDAYRKH 60

Query: 60  GKDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
             DWKKVAA VRN RS EMVEAL++MNRAYLSLPEGTASV GLIAMMTDHY+VMEGS+SE
Sbjct: 61  VGDWKKVAAAVRNNRSVEMVEALFSMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSESE 120

Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVK 178
            E +DASE+PRK  KRKR +V+    +E++    S+A+  GCLSLLK+++    + RA  
Sbjct: 121 VEDHDASEVPRKHLKRKRPQVRPIDFREEVIPPHSVASVEGCLSLLKQTQAYEKRRRATG 180

Query: 179 KRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVS 238
           KRTPRF V+ + ++DDR D  P NK+ ++  +DA+DD            AS+RGG     
Sbjct: 181 KRTPRFLVAITHERDDRADSSPPNKRAKKQ-LDADDD------------ASRRGGG---- 223

Query: 239 QSPHKKTEHGKSSPVQIWDKMFPP--AETAHPDAREALNEEGCPEARILNRRPENGAYTR 296
            SP+++TE   S+  ++  KM     A+  HPD+  ++ E G   +R  +RR + GA  R
Sbjct: 224 -SPYRRTELSDSTQTRL-RKMLQAQEAQFKHPDS--SMFENGVRTSR--DRRHKKGAADR 277

Query: 297 ARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVG 356
               L DMEG+    V +KGK      +++EE        EG      ++GL        
Sbjct: 278 DGALLRDMEGL----VTKKGKN-----VRIEEA-------EGNDSDDDDDGL-------- 313

Query: 357 SEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLML-PDSTMESESSVQLK 415
                                            AL+ LA++S  L P + MESE S   +
Sbjct: 314 --------------------------------GALKALAEMSASLAPAALMESELSPLWE 341

Query: 416 EERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGND 475
           EER A ++D+KS   E  STSH +EK K  GP+   L  I+  +   P KS      GN 
Sbjct: 342 EERIANNVDEKSKTLETVSTSHHREKAKEAGPEASLLLAISAPDKRKP-KSVPESVDGN- 399

Query: 476 VETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHN-KFAS 534
           V +V E+          S+RKRK     ++ + EA  ++   + L ++  AE+ N K   
Sbjct: 400 VVSVEEL--------GTSRRKRKPKF--QVLDVEAPKESIQEKFLYTKESAEDDNLKTLV 449

Query: 535 KGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASI-DLVAPTGQAPVASPASSPTKHQSRR 593
           K +R+ Q  A  KQ K  +  E SS+    + +I D + P  Q     PA+ P K  +RR
Sbjct: 450 KARRSGQGPA--KQLKTAKTSEESSLASDKKLTIPDAIVPATQVSALGPATLPQKPPNRR 507

Query: 594 KMDLKRKLS--SKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFE 651
           KM LK+ L   +K ++ + + L++   + SLS+ + L   KEK S CLS  +VRRWC +E
Sbjct: 508 KMSLKKSLQERAKSLETTHDKLRS---RKSLSEHELL---KEKFSNCLSYPLVRRWCIYE 561

Query: 652 WFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREK 711
           WFYSAIDYPWF+  EF +YLNHVGLGH PRLTRVEW VI+SSLG+PRRLS+RFLHDER+K
Sbjct: 562 WFYSAIDYPWFAKMEFTDYLNHVGLGHAPRLTRVEWSVIKSSLGRPRRLSERFLHDERDK 621

Query: 712 LKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKC 743
           L+QYRES                            RVIAI+PKTRE+ DG +LT+DH+KC
Sbjct: 622 LQQYRESVRKHYTELRGCATGVLHTDLAHPLSVGNRVIAIYPKTREIRDGKILTVDHNKC 681

Query: 744 RVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPM 803
            V FD  ELGVE VMDID MP NPL+ MPE LRR+   DK  AI KE Q+N HP+  + +
Sbjct: 682 NVLFD--ELGVELVMDIDCMPLNPLEYMPEGLRRK--TDKCVAIGKEAQLNRHPSSDASL 737

Query: 804 LFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKS 838
           LF+           P+ L+   K  MNH   QA S
Sbjct: 738 LFS-----------PSVLE-NVKFSMNHPAKQAAS 760



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 9/159 (5%)

Query: 1013 TMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHF 1072
            +M   A +A SS K  ED+   + +A   I + Q      V  I+  E  NGSL   +H+
Sbjct: 750  SMNHPAKQAASSGKNNEDSGNMVHQA-SSIGEHQPLYSSIVPGIKHQEHTNGSL---DHY 805

Query: 1073 VSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQI 1131
             S T +P      +G   QD S KN+ Q+PSELITSCVA+ LM+Q  +++ + P DVAQ+
Sbjct: 806  PSNTAEPM----TNGFISQDGSGKNKTQMPSELITSCVASWLMMQMISQKQYPPEDVAQL 861

Query: 1132 IDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            +D+AVS L P CPQN+PIYREI+  MG IKTQI+AL+ T
Sbjct: 862  MDTAVSDLQPRCPQNMPIYREIQTYMGLIKTQIMALVRT 900


>gi|79523308|ref|NP_198113.2| protein ALWAYS EARLY 1 [Arabidopsis thaliana]
 gi|296439606|sp|Q6A331.2|ALY1_ARATH RecName: Full=Protein ALWAYS EARLY 1; Short=AtALY1
 gi|225898943|dbj|BAH30602.1| hypothetical protein [Arabidopsis thaliana]
 gi|332006323|gb|AED93706.1| protein ALWAYS EARLY 1 [Arabidopsis thaliana]
          Length = 971

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 369/843 (43%), Positives = 485/843 (57%), Gaps = 144/843 (17%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQ-KKKLSDKLGPQWSKGELQRFYEAYRNY 59
           MAPTRKS+SVNKR+ NE SP  +  S SK+KQ KKKL+DKLGPQW+K EL RFY+AYR Y
Sbjct: 1   MAPTRKSKSVNKRFTNEASPDINFGSASKTKQRKKKLADKLGPQWTKRELVRFYDAYRKY 60

Query: 60  GKDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
             DWKKVAA VRN RS EMVE L+ MNRAYLSLPEGTASV GLIAMMTDHY+VMEGS+SE
Sbjct: 61  VGDWKKVAAAVRNNRSVEMVETLFCMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSESE 120

Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVK 178
            E +DASE+ RK  KRKR +V  S  +E++    S+A+  GCLS LK+++    + RA  
Sbjct: 121 GEDHDASEVTRKHLKRKRPQVLPSDFREEVVPPHSVASVEGCLSFLKQTQAYEKRQRATG 180

Query: 179 KRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVS 238
           KRTPRF V+ + ++DD +D+ P NK+ ++  +DA+DD            AS+RGG     
Sbjct: 181 KRTPRFLVAITHERDDIEDFSPPNKRAKKQ-LDADDD------------ASRRGGG---- 223

Query: 239 QSPHKKTEHGKSSPVQIWD-KMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRA 297
            SP+++ E  + +P ++        A+  HPD+  ++ E G     + +R  + GA  R 
Sbjct: 224 -SPYRRKELSEITPTRLRKTSQAQEAQFKHPDS--SMFENG-----VRDRWHKKGAADRD 275

Query: 298 RKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGS 357
              LMDMEG+ T +          K ++VEE        EG                   
Sbjct: 276 GALLMDMEGLVTQK---------EKIVRVEEA-------EGN------------------ 301

Query: 358 EISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLML-PDSTMESESSVQLKE 416
                                  + D+   L AL+TLA++S  L P   +ESESS   +E
Sbjct: 302 -----------------------YSDDDDGLGALKTLAEMSASLAPAGLLESESSPHWEE 338

Query: 417 ERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDV 476
           ER   ++D KS+  E  STSH +EK K  G ++  L+ I+  +   P KS      GN V
Sbjct: 339 ERKTNNVDKKSNTLETVSTSHHREKAKQAGLEDNLLHAISAPDKRKP-KSVPESVDGN-V 396

Query: 477 ETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKG 536
            ++ E++       S  KRK K  +   ++  E+  D  +  T ES  V  +  K   K 
Sbjct: 397 VSIEELR------TSSRKRKPKFQVLDVVAPKESTQDKSLY-TKESAEV--DSLKTPVKA 447

Query: 537 KRTSQNSAQSKQWKPGRV-LEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKM 595
           +R+SQ  A  KQ K  +  +E SS +D+     D V P  Q   + P + P K  +RRK+
Sbjct: 448 RRSSQGPA--KQLKTAKTTVESSSASDKKITGPDAVVPATQVSASGPETLPQKPPNRRKI 505

Query: 596 DLKRKLSSKEMKFSENSLKTQPNK----NSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFE 651
            LK+ L  +       SL+T  +K      LS+ + L   +EKLS CLS  +VRRWC +E
Sbjct: 506 SLKKSLQERA-----KSLETTHDKPRSFKKLSEHELL---QEKLSNCLSYPLVRRWCIYE 557

Query: 652 WFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREK 711
           WFYSAIDYPWF+  EF +YLNHVGLGH PRLTRVEW VI+SSLG+PRRLS+RFL DER+K
Sbjct: 558 WFYSAIDYPWFAKMEFTDYLNHVGLGHAPRLTRVEWSVIKSSLGRPRRLSQRFLQDERDK 617

Query: 712 LKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKC 743
           L++YRES                            RVIAIHPKTRE+ DG +LT+DH+KC
Sbjct: 618 LQEYRESVRKHYTELRGCATGVLHTDLARPLSVGNRVIAIHPKTREIRDGKILTVDHNKC 677

Query: 744 RVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPM 803
            V FD  ELGVE VMDID MP NPL+ MPE LRRQI  DK  AI KE ++N HP+  + +
Sbjct: 678 NVLFD--ELGVELVMDIDCMPLNPLEYMPEGLRRQI--DKCLAICKEARLNRHPSSDASV 733

Query: 804 LFA 806
           LF+
Sbjct: 734 LFS 736



 Score =  147 bits (370), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 118/186 (63%), Gaps = 8/186 (4%)

Query: 987  LDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQ 1046
            L ++  +QE    + EIV  S+  A  MVDAA+KA SS K  ED+   + +AL  I + Q
Sbjct: 793  LQHTSDAQEMEPEMIEIVIESKSIAQAMVDAAIKAASSGKNNEDSENMVHQALSSIGEHQ 852

Query: 1047 LTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELI 1106
               +  V  I+  E  NGSL HH+     T +P     ++G   Q+ S KN+  +PSELI
Sbjct: 853  PLDNSIVPGIKHQEYTNGSLDHHS---LNTAEPM----SNGFISQEGSGKNKTPMPSELI 905

Query: 1107 TSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQIL 1165
            TSCVA+ LM+Q  +++ + PADVAQ++D+ V+ L P CPQN+PIYREI+ CMG IKTQI+
Sbjct: 906  TSCVASWLMMQMISKKQYPPADVAQLMDTVVNDLQPRCPQNMPIYREIQTCMGLIKTQIM 965

Query: 1166 ALIPTS 1171
            AL+ TS
Sbjct: 966  ALVRTS 971


>gi|50539424|emb|CAE47463.1| always early 1 protein [Arabidopsis thaliana]
          Length = 971

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 369/843 (43%), Positives = 485/843 (57%), Gaps = 144/843 (17%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQ-KKKLSDKLGPQWSKGELQRFYEAYRNY 59
           MAPTRKS+SVNKR+ NE SP  +  S SK+KQ KKKL+DKLGPQW+K EL RFY+AYR Y
Sbjct: 1   MAPTRKSKSVNKRFTNEASPDINFGSASKTKQRKKKLADKLGPQWTKRELVRFYDAYRKY 60

Query: 60  GKDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
             DWKKVAA VRN RS EMVE L+ MNRAYLSLPEGTASV GLIAMMTDHY+VMEGS+SE
Sbjct: 61  VGDWKKVAAAVRNNRSVEMVETLFCMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSESE 120

Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVK 178
            E +DASE+ RK  KRKR +V  S  +E++    S+A+  GCLS LK+++    + RA  
Sbjct: 121 GEDHDASEVTRKHLKRKRPQVLPSDFREEVVPPHSVASVEGCLSFLKQTQAYEKRQRATG 180

Query: 179 KRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVS 238
           KRTPRF V+ + ++DD +D+ P NK+ ++  +DA+DD            AS+RGG     
Sbjct: 181 KRTPRFLVAITHERDDIEDFSPPNKRAKKQ-LDADDD------------ASRRGGG---- 223

Query: 239 QSPHKKTEHGKSSPVQIWD-KMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRA 297
            SP+++ E  + +P ++        A+  HPD+  ++ E G     + +R  + GA  R 
Sbjct: 224 -SPYRRKELSEITPTRLRKTSQAQEAQFKHPDS--SMFENG-----VRDRWHKKGAADRD 275

Query: 298 RKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGS 357
              LMDMEG+ T +          K ++VEE        EG                   
Sbjct: 276 GALLMDMEGLVTQK---------EKIVRVEEA-------EGN------------------ 301

Query: 358 EISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLML-PDSTMESESSVQLKE 416
                                  + D+   L AL+TLA++S  L P   +ESESS   +E
Sbjct: 302 -----------------------YSDDDDGLGALKTLAEMSASLAPAGLLESESSPHWEE 338

Query: 417 ERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDV 476
           ER   ++D KS+  E  STSH +EK K  G ++  L+ I+  +   P KS      GN V
Sbjct: 339 ERKTNNVDKKSNTLETVSTSHHREKAKQAGLEDNLLHAISAPDKRKP-KSVPESVDGN-V 396

Query: 477 ETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKG 536
            ++ E++       S  KRK K  +   ++  E+  D  +  T ES  V  +  K   K 
Sbjct: 397 VSIEELR------TSSRKRKPKFQVLDVVAPKESTQDKSLY-TKESAEV--DSLKTPVKA 447

Query: 537 KRTSQNSAQSKQWKPGRV-LEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKM 595
           +R+SQ  A  KQ K  +  +E SS +D+     D V P  Q   + P + P K  +RRK+
Sbjct: 448 RRSSQGPA--KQLKTAKTTVESSSASDKKITGPDAVVPATQVSASGPETLPQKPPNRRKI 505

Query: 596 DLKRKLSSKEMKFSENSLKTQPNK----NSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFE 651
            LK+ L  +       SL+T  +K      LS+ + L   +EKLS CLS  +VRRWC +E
Sbjct: 506 SLKKSLQERA-----KSLETTHDKPRSFKKLSEHELL---QEKLSNCLSYPLVRRWCIYE 557

Query: 652 WFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREK 711
           WFYSAIDYPWF+  EF +YLNHVGLGH PRLTRVEW VI+SSLG+PRRLS+RFL DER+K
Sbjct: 558 WFYSAIDYPWFAKMEFTDYLNHVGLGHAPRLTRVEWSVIKSSLGRPRRLSQRFLQDERDK 617

Query: 712 LKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDHDKC 743
           L++YRES                            RVIAIHPKTRE+ DG +LT+DH+KC
Sbjct: 618 LQEYRESVRKHYTELRGCATGVLHTDLARPLSVGNRVIAIHPKTREIRDGKILTVDHNKC 677

Query: 744 RVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPM 803
            V FD  ELGVE VMDID MP NPL+ MPE LRRQI  DK  AI KE ++N HP+  + +
Sbjct: 678 NVLFD--ELGVELVMDIDCMPLNPLEYMPEGLRRQI--DKCLAICKEARLNRHPSSDASV 733

Query: 804 LFA 806
           LF+
Sbjct: 734 LFS 736



 Score =  143 bits (360), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/186 (44%), Positives = 117/186 (62%), Gaps = 8/186 (4%)

Query: 987  LDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQ 1046
            L ++  +QE    + EIV  S+  A  MVDAA+KA SS K  ED+   + +AL  I + Q
Sbjct: 793  LQHTSDAQEMEPEMIEIVIESKSIAQAMVDAAIKAASSGKNNEDSENMVHQALSSIGEHQ 852

Query: 1047 LTSDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELI 1106
               +  V  I+  E  NGSL HH+     T +P     ++G   Q+   KN+  +PSELI
Sbjct: 853  PLDNSIVPGIKHQEYTNGSLDHHS---LNTAEPM----SNGFISQEGPGKNKTPMPSELI 905

Query: 1107 TSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQIL 1165
            TSCVA+ LM++  +++ + PADVAQ++D+ V+ L P CPQN+PIYREI+ CMG IKTQI+
Sbjct: 906  TSCVASWLMMRMISKKQYPPADVAQLMDTVVNDLQPRCPQNMPIYREIQTCMGLIKTQIM 965

Query: 1166 ALIPTS 1171
            AL+ TS
Sbjct: 966  ALVRTS 971


>gi|147863246|emb|CAN82618.1| hypothetical protein VITISV_000119 [Vitis vinifera]
          Length = 928

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 366/958 (38%), Positives = 518/958 (54%), Gaps = 168/958 (17%)

Query: 302  MDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--LSSRKGKVGSEI 359
             + +GVGTVEV +KGKKFY KK +VE+  N+  DD  EACSGTEEG  LS+ +G++ +E+
Sbjct: 16   FEGKGVGTVEVQQKGKKFYGKKAEVEDSGNNHLDDIKEACSGTEEGQKLSAVRGRLETEV 75

Query: 360  SNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSLMLPDSTMESESSVQLKEERT 419
             +AK      Q  RKRSKK+ FG                          ESSV +K E  
Sbjct: 76   VDAKIVRSSSQGTRKRSKKVLFG-------------------------GESSVPVKGEN- 109

Query: 420  AFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRK-SKLGRYSGNDVET 478
              DI D+S   +    +H +EK + LG K K  N++    +I P K SKL ++S  D+ +
Sbjct: 110  -IDIVDESKTLDVMPVNHRREKPRTLGAKVKGNNSVP-GVNIPPLKASKLEKFSALDISS 167

Query: 479  VAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKGKR 538
              E+KE P+P  + S+++++     K   SE  +D++++ + ++EA  +E  K  SKGKR
Sbjct: 168  FPEIKEGPQPSITGSRKRKQKSFGFKGMESETHSDSNLSVSQKTEA-TDEGKKPVSKGKR 226

Query: 539  TSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLK 598
            +S +++  KQ K  +  E  S + + R   + +    Q   A+    PTK +SRRKMD +
Sbjct: 227  SSHSASHPKQGKLVKPPERCSSSTETRREENYLVVPAQVSSANQVHLPTKVRSRRKMDTQ 286

Query: 599  RKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAID 658
            +    K+++F+EN +  QP     S +DR  ++KEKLS CLS   VRRWC FEWFYSAID
Sbjct: 287  KPSFQKDLRFAENYVNDQPIIPIPSVQDRARTLKEKLSNCLSCYRVRRWCAFEWFYSAID 346

Query: 659  YPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES 718
            YPWF+ +EFVEYL+HVGLGH+PRLTRVEWGVIRSSLGKPRR S++FL +E+EKL QYR+S
Sbjct: 347  YPWFAKKEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEKEKLNQYRDS 406

Query: 719  ----------------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQFDRP 750
                                        RV+A+HP+TRE+HDG VLT+D   CRVQF+RP
Sbjct: 407  VRTHYTELRAGTREGLPTDLAPPLSVGQRVVALHPRTREIHDGKVLTVDRTWCRVQFERP 466

Query: 751  ELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISADKFSAISKELQVNGHPN------FGSPM 803
            ELGVE VMDID MP NPL+NMP +L +  ++ +KF     EL++NG P       +G   
Sbjct: 467  ELGVELVMDIDCMPLNPLENMPASLTKHSLAVNKFFENVSELKMNGGPKDRKITEYGK-- 524

Query: 804  LFASDGHLEKA-----------PILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYG 852
             F++  ++E             PI  N L KQ K    +A   AK  + +  ++QQ A  
Sbjct: 525  -FSTSENMENVDGPSRLSPSTYPI--NNLLKQTKAGSTNANFHAKVGSGEAANSQQVANS 581

Query: 853  QLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPLK 904
            Q   + Q Q +EA V+ALSE        EA+L EL+  N+++ E+   G+SSLK+S+  K
Sbjct: 582  QSIILAQNQGKEADVQALSELTRALDKKEAVLCELRRMNDEVSENYKDGDSSLKESDLFK 641

Query: 905  KHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVR 964
            K  A +LV                                            SSAL+++R
Sbjct: 642  KQYAALLV--------------------------------------------SSALIRLR 657

Query: 965  QCNTHPESSRPSWPMHPANV-------KMLD-NSHVSQESGSAVAEIVNGSRLKAHTMVD 1016
            Q NT+  +S  +WP   A++          D +S  +QESG+ V EIV  SR KA TMVD
Sbjct: 658  QRNTYRGNSPVTWPKPMASLADPGGLMSSFDCSSCYTQESGTHVVEIVESSRKKARTMVD 717

Query: 1017 AAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS---PEQVNGSLGHHNHFV 1073
            AA++AMSS+KE  +   +I +A+D ++ R L  D  +S +RS   P+ ++GSL   + F 
Sbjct: 718  AAMQAMSSLKEEGNNVERIEDAIDFVNNRLLVDDSGMSTMRSSAVPDPLHGSLASQDQFT 777

Query: 1074 SGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQT--CTERHTPADVAQI 1131
            S T +P   + A   KL   SD NEAQIP+ELIT CVATLLMIQ      +   + ++++
Sbjct: 778  SCTSNPLSGSQAPDLKLNISSDDNEAQIPAELITHCVATLLMIQVYQVVGQGAKSQISEV 837

Query: 1132 IDSAVSSLHPCCPQNLP-------------IYREIEMC-------MGRIKTQILALIP 1169
            +   +    P    N+              +Y   E C          +KT I+  IP
Sbjct: 838  VFKGLGVFKPLLLHNMKLTSLFRRGSTKANVYFAAEGCSTYRKEFYAVVKTSIIGGIP 895


>gi|326516110|dbj|BAJ88078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 817

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 375/883 (42%), Positives = 492/883 (55%), Gaps = 131/883 (14%)

Query: 349  SSRKGK-------VGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--L 399
            SSRK K        GS+IS       P     KRS++LFFGDE +AL+AL TLAD+S  +
Sbjct: 2    SSRKAKDEADVDVFGSKIS------WPSNKSNKRSRQLFFGDELSALDALHTLADISVNI 55

Query: 400  MLPDSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAE 459
            + P S  ESESS Q K+E    + DDK S P   S    K+       K K  + I   E
Sbjct: 56   LQPSSIAESESSAQFKDESKDNESDDKPSVPAAVSL-FDKKDKPRKTKKIKRQSEIASNE 114

Query: 460  DIIPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRT 519
             +  +K+KL +   +D  T    ++  +    M K+KRK   + KIS  E  T   +  +
Sbjct: 115  MVTRKKAKLSKDHHHDGSTSEVKQDDCKCGVKMEKKKRKPS-TVKISKDEKNT---LKDS 170

Query: 520  LESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPV 579
             ++E  AEE    +SKG R +  S  SKQ K        +  D  + ++D V  T +  +
Sbjct: 171  EKTEVSAEEGKVSSSKG-RHAHASPVSKQNKSKAQESSPAHADFGKEAMDTV-DTAENAI 228

Query: 580  ASPASSPTKHQSRRKMDLKRKLS--SKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSG 637
               + S +K +SRRK+ + + L+  SK  + +++S       N     + ++ +K+KLS 
Sbjct: 229  TQQSDSASKSKSRRKLGILKALAPESKPAEGADDSCD-----NVSYPVNNVIELKDKLSH 283

Query: 638  CLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKP 697
            CLSS  +RRWC  EWFYSAIDYPWF+  EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKP
Sbjct: 284  CLSSRFLRRWCMSEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKP 343

Query: 698  RRLSKRFLHDEREKLKQYRES----------------------------RVIAIHPKTRE 729
            RRLSK+FL +EREKL QYRES                            RVIA HPKTRE
Sbjct: 344  RRLSKQFLQEEREKLSQYRESVRQHYAELQSGVREGLPTDLARPLAVGQRVIARHPKTRE 403

Query: 730  LHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISK 789
            LHDGSVLT+D  +CRVQFDRPELGVEFVMDID MP +PL+N PE+LRRQ   +K+ +   
Sbjct: 404  LHDGSVLTVDRTRCRVQFDRPELGVEFVMDIDCMPLHPLENFPESLRRQNIVNKYYSSFS 463

Query: 790  ELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQA 849
            E++    P       +   G    A  LPN       GD   ++ QAK+ A +  +A Q 
Sbjct: 464  EVKFEDRPK-----EYGGGG---AARFLPN-------GDTFDSIAQAKTTANEAAAAAQQ 508

Query: 850  A-YGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDS 900
            A YGQ CT+ QIQ REA +RAL+E        EALL+ L++ N ++   Q  GE +++D 
Sbjct: 509  AMYGQPCTLSQIQEREADIRALAELSRALDKKEALLVGLRHMNEEVSGKQKDGE-TIRDL 567

Query: 901  EPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSAL 960
            E  +K  A VLVQL+++ND                                     +SAL
Sbjct: 568  EHFRKQYAMVLVQLRDSND-----------------------------------HVASAL 592

Query: 961  LQVRQCNT---HPESSRPSWPMHPANV--KMLDNS-----HVSQESGSAVAEIVNGSRLK 1010
            L +RQ NT   HP    P+          +  D S     +++QESGS V EI++ SR K
Sbjct: 593  LCLRQRNTFHGHPAQPYPTKSTENGGAFNRTPDPSSNLFGYINQESGSQVMEIIDTSRSK 652

Query: 1011 AHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHN 1070
            A TMVD A++AM  V EGE+A+ KIGEALD+++ R   S   +  IR     +G     N
Sbjct: 653  AKTMVDVAIQAMCKVSEGENAFAKIGEALDNLNLRGTGSGSSILGIRRIPPDSGQANSDN 712

Query: 1071 HFVSGTCDP--QPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPAD 1127
               SG  DP    TNN S  ++      +EAQ PSELI+SCVAT+LMIQ CTE+ + PA+
Sbjct: 713  S-ASGRFDPAAAATNNISSPRVLPNGSDSEAQFPSELISSCVATILMIQNCTEKQYHPAE 771

Query: 1128 VAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            VA I+DSA+S L PC  QN+PI+REIEMCMG IK Q+LALIPT
Sbjct: 772  VAHILDSALSRLQPCSSQNVPIFREIEMCMGIIKNQMLALIPT 814


>gi|357478699|ref|XP_003609635.1| Lin-9-like protein [Medicago truncatula]
 gi|355510690|gb|AES91832.1| Lin-9-like protein [Medicago truncatula]
          Length = 1277

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 386/1059 (36%), Positives = 548/1059 (51%), Gaps = 140/1059 (13%)

Query: 171  GNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQ 230
            G +P AV+KRTPR P+SYS  KD+   +    ++D +  +D  D  V H  ALAL+EASQ
Sbjct: 300  GIRPHAVRKRTPRVPISYSIGKDNEGKFFSSARQDSKQMIDTTD--VTHKIALALSEASQ 357

Query: 231  RGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPE 290
            RGGS +   SP+KK      SP     K    +       R++  +E   E  + +   +
Sbjct: 358  RGGSSKKVGSPNKKN---MPSPNLKSGKKHVKSGIVGAKFRKSDMDEASSELSLGSTEGD 414

Query: 291  NGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEG--L 348
            NG Y+         E  G V    KG K YRK ++ ++  N   +D  EA SGT++G   
Sbjct: 415  NGDYSGKLIHRNSRENTGRVRNQEKGIKHYRKSLEPQKNTNKHLNDIKEASSGTDDGKNQ 474

Query: 349  SSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFG-DESTALNALQTLADLSLMLPDSTME 407
            SS K    ++ +NAK+     +  RK+SKK  F  DE +A +AL+TLADLSLM+P++  +
Sbjct: 475  SSFKSNFDTDFANAKSVRSSYKGPRKKSKKQHFEEDEGSAFDALKTLADLSLMMPETNPD 534

Query: 408  SESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSK 467
            +ES VQ  E     ++D+     +  ++S    K+             ++  D  P+   
Sbjct: 535  TESFVQFNEG----NLDESKMETDNGNSSRKSGKV------------FSDKGDAAPKAEG 578

Query: 468  LGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAE 527
              + S                     KRK+KS+    ++N E  T + ++ + +   V +
Sbjct: 579  AYQLSAGS-----------------RKRKQKSL---TLNNDETHTGSPLSGS-QKIKVTD 617

Query: 528  EHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVN--------DQNRASIDLVAP--TGQA 577
            E  K   KGKR+S ++A S+     + L   S N        D + + I  ++    GQA
Sbjct: 618  EVKKSTVKGKRSSVSTAHSRNLNMVKSLGNMSSNIVDKAERGDSSFSPIIFLSTNQVGQA 677

Query: 578  PVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKN-SLSQEDRLLSMKEKLS 636
                P         RRKM+  + +  ++   SEN+   Q +K+ +L   + +   K  L 
Sbjct: 678  NRVRP---------RRKMEKPKPMVQQDHTMSENNFSGQHDKSIALYWRNSMERHKGMLI 728

Query: 637  GCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGK 696
             CLSS+  RRWC  EWFYSAIDYPWFS REFVEYL HVGLGH+PRLTR+EWGVIRSSLG+
Sbjct: 729  NCLSSHQTRRWCISEWFYSAIDYPWFSKREFVEYLEHVGLGHVPRLTRIEWGVIRSSLGR 788

Query: 697  PRRLSKRFLHDEREKLKQYRES----------------------------RVIAIHPKTR 728
            PRR S++FL +E+ KL QYRES                            RVIAIHPKTR
Sbjct: 789  PRRFSEQFLTEEKHKLNQYRESVRSHYAEVLAGTKEGLPADLAQPLIVGQRVIAIHPKTR 848

Query: 729  ELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL-RRQISADKFSAI 787
            E+HDGS+LT+DH + RVQFD+ ELGVEFVMDID MP  P +NMP +L R  I+  + +  
Sbjct: 849  EIHDGSILTVDHCRYRVQFDQHELGVEFVMDIDCMPLYPSENMPMSLIRHHITPARMNEN 908

Query: 788  SKELQVNGHPN----FGSPMLFASD-GHLEKAPILPNTLQKQAKGDMNHALPQAKSLATD 842
             ++L  NG           ML  ++     K   +P+ +     G  +    QAK   ++
Sbjct: 909  LRDLTHNGKLTERKISEHTMLSPTEKSDAIKGRCVPSAMH----GFSSSCKSQAKVAGSE 964

Query: 843  IVSAQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGE 894
            I + Q A+      + Q+Q++EA + A+SE        E +L ELK+ N+ + ESQ  GE
Sbjct: 965  ICNGQSASSSHSSFLEQLQSKEADILAISELTRALEKKELVLSELKHMNDGVSESQKYGE 1024

Query: 895  SSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDM 954
            +S+KDSEP K++ A+VL QL EAN+Q              +S     L  R +       
Sbjct: 1025 NSVKDSEPFKRNYASVLKQLTEANEQ--------------VSSSLFCLRQRNAY------ 1064

Query: 955  QASSALLQVRQCNTHPESSRPSWPMHPANVKMLDNSH-VSQESGSAVAEIVNGSRLKAHT 1013
            QASS++L ++      +   P      +N     N   +SQ   S +AEIV  SR KA T
Sbjct: 1065 QASSSVLSLKPIANLED---PGGHASSSNCSACHNQESISQ---SHIAEIVESSRRKART 1118

Query: 1014 MVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHFV 1073
            MV  A +AMS  ++ E    ++ + ++ I+ R    D   S        + +L   +   
Sbjct: 1119 MVVQATQAMSVFRKTESKVERVEDVINFINNRLSVDDSTASATNFLAIDSITLASRDQLT 1178

Query: 1074 -SGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT-PADVAQI 1131
             S T +          +L   SD+NE +IPSELI+ C+ATLLMIQ CTER   PADVAQ+
Sbjct: 1179 ASSTLNILARCPVQDDELNSSSDQNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQV 1238

Query: 1132 IDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            +DSAV+SL P C +NLPIY EI+ CMG I+ QILALIPT
Sbjct: 1239 LDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALIPT 1277



 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/182 (59%), Positives = 131/182 (71%), Gaps = 16/182 (8%)

Query: 1   MAPTRKSRSVNKRYAN----EVSPAKDVISPSKSKQK--------KKLSDKLGPQWSKGE 48
           M PTRKSRSVNKR++N      S  KD  +  +++QK        +KL+D LGPQWSK E
Sbjct: 1   MGPTRKSRSVNKRFSNIREAAASKDKDAANTGRNRQKACPGIQKKRKLADMLGPQWSKAE 60

Query: 49  LQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDH 108
           L+RFYEAYR YGKDWKKVA  VRNR+ EMVEALY  NRAYLSLPEGTASVVGLIAMMTDH
Sbjct: 61  LERFYEAYREYGKDWKKVALAVRNRTMEMVEALYTKNRAYLSLPEGTASVVGLIAMMTDH 120

Query: 109 YNVMEGSDSERESNDASEMPRKSQKRKRAKVQ----LSASKEDISQSWSMAATGGCLSLL 164
           Y+++ GSDS +ESN+ SE+ +KS+KR R K      +     D SQ  S+A+  GCLSLL
Sbjct: 121 YSILGGSDSGKESNEDSEIMKKSKKRPRGKPNDNKAVDGHFSDHSQPHSVASDDGCLSLL 180

Query: 165 KR 166
           K+
Sbjct: 181 KK 182


>gi|449454161|ref|XP_004144824.1| PREDICTED: protein ALWAYS EARLY 2-like [Cucumis sativus]
          Length = 962

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 332/804 (41%), Positives = 445/804 (55%), Gaps = 157/804 (19%)

Query: 34  KKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPE 93
           KKLSDKLGPQWSK E++ FYEAYR YG+DWKKVA+ +  RS EMVE LYNMN+AYLSLPE
Sbjct: 71  KKLSDKLGPQWSKEEIESFYEAYRKYGQDWKKVASSMHQRSTEMVETLYNMNKAYLSLPE 130

Query: 94  GTASVVGLIAMMTDHYNVMEGSDSERESNDAS---EMPRKSQKRKRAKVQLSASKEDISQ 150
           GTASVVGLIA+MTD+YNVM G+DSERE+ DAS   E+P+ +Q     +VQLS S E    
Sbjct: 131 GTASVVGLIALMTDYYNVMGGNDSERENYDASGFQELPKTNQ----VQVQLSISNEGHFS 186

Query: 151 SWSMAATGGCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAV 210
           + S+AA+GGCLS L+   + GN+ R V KRTPR P+SY +++D  +++   NK  ++S  
Sbjct: 187 TRSVAASGGCLSSLR--SLYGNRLRVVGKRTPRVPISYLEERDKGENHASGNKCSQKSEF 244

Query: 211 DANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDA 270
           D   DEVAH AA AL EASQR  S   +  P K  E+ K S                   
Sbjct: 245 DVISDEVAHGAASALAEASQRIDS-SATFIPSKIKENMKFS------------------Y 285

Query: 271 REALNEEGCPEARILNRRPENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVR 330
             +   +G P          N  Y     S +  E VGT + H K KK            
Sbjct: 286 EVSGGHKGRP----------NETYDYDLSSPVATECVGTEKTHHKMKK------------ 323

Query: 331 NSLSDDEGEACSGTEEGLSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNA 390
                            LS  +GKV S+ SNA        +QRK+ +KL  GDE+T L+A
Sbjct: 324 ----------------RLSVLEGKVDSKSSNAVCVLSSSLVQRKKRRKLPHGDENTTLDA 367

Query: 391 LQTLADLSLMLPDSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEK 450
           LQ LAD+S M+P +TM+SE SVQ+ EE  +F+++DKS  PE+T +    +       K+ 
Sbjct: 368 LQILADVSSMIPFTTMKSEPSVQIVEETESFNLEDKSYIPEDTLSDRSDKG------KQV 421

Query: 451 ALNTITEAEDIIPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEA 510
            +N +   ED +  K K G  +G  ++  ++ K++ E   +M K KR  V    I +++ 
Sbjct: 422 MVNAMPNIEDRVRGKLKPG--NGLSIDVASKRKKRLEHLGTMRKGKRNFV----IPDTKV 475

Query: 511 VTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDL 570
             D H+   L +  +                          GR+     + ++N+A++  
Sbjct: 476 PVDVHLREDLTTITL--------------------------GRI---KPLKNENQATL-- 504

Query: 571 VAPTGQAPVASPASSPTK--HQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRL 628
                          P K   +SR KM+L + L+ ++ KF ++ L  +  K S S + + 
Sbjct: 505 ---------------PIKLGRRSRCKMELWKLLTRQKTKFCDDKLGKELMKYSSSVQAKA 549

Query: 629 LSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWG 688
             +K+KLS C+SS MVRRWC FEWFYSAIDYPWF+  EFVEYL+HVGLG I +LTRVEWG
Sbjct: 550 FFLKDKLSNCMSSTMVRRWCIFEWFYSAIDYPWFARSEFVEYLHHVGLGSITKLTRVEWG 609

Query: 689 VIRSSLGKPRRLSKRFLHDEREKLKQYRES----------------------------RV 720
           +IRSSLG+PRR S  FLH+ER KL++YRES                            R+
Sbjct: 610 IIRSSLGRPRRFSDNFLHEERMKLQRYRESVRQYYGKLRAGICKGLPTDLARPLSVGQRI 669

Query: 721 IAIHPKTR--ELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ 778
           IA+HP     E+H+GSVL + HD  R+QFD  E+GV+ VMD + MP NP+DN PE  RRQ
Sbjct: 670 IALHPYPYRLEVHNGSVLRLQHDNYRIQFDNQEIGVKPVMDFECMPFNPMDNFPETFRRQ 729

Query: 779 I-SADKFSAISKELQVNGHPNFGS 801
           I S ++     KELQ N HPN  S
Sbjct: 730 ICSINRAPLEYKELQRNNHPNVPS 753



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 122/223 (54%), Gaps = 23/223 (10%)

Query: 958  SALLQVRQCNTHPESSRPSWPMHPANVKMLDNS----HVSQESGSAVAEIVNGSRLKAHT 1013
            S    ++Q NT   +S     + PAN + L +     +VSQ SG    +IV GSR KA  
Sbjct: 753  STTFNLKQHNTFSGNS-----LAPANARALGSIPCSLNVSQGSGRGAVDIVQGSREKAQM 807

Query: 1014 MVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQ-VNGSLGHHNHF 1072
            MV+ A++ + S  +G+D  T I  AL   D +   S  +V    S  Q +   LG H   
Sbjct: 808  MVNVAIEVLLSKNDGDDPLTIIYGALHSSDNQN--SSFKVQKPSSMSQNMKDCLGAH--- 862

Query: 1073 VSGTCDPQPTNNASGTKLQDVS----DKNEAQIPSELITSCVATLLMIQTCTERHTPA-D 1127
                 +  P+ + S   L  +     +++   IPS LITSCVATLLMIQ C ER  PA D
Sbjct: 863  ---VKELFPSKHLSTADLSSLRSRHFNRDYRGIPSNLITSCVATLLMIQACIERPYPASD 919

Query: 1128 VAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            V+QI+  AV SLHP C QNL  Y+EIE C+ RI+TQ+L+++PT
Sbjct: 920  VSQILGLAVKSLHPRCSQNLHFYKEIETCVRRIQTQLLSIVPT 962


>gi|224107359|ref|XP_002314457.1| predicted protein [Populus trichocarpa]
 gi|222863497|gb|EEF00628.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 304/734 (41%), Positives = 407/734 (55%), Gaps = 132/734 (17%)

Query: 525  VAEEHNKFASKGKRTSQNSAQSKQWKPGRVLE-GSSVNDQNRASIDLVAPTGQAPVASPA 583
            + ++ + F SKGK  SQ++   K+ K  +  E  SS N+  R   D    T +   A+  
Sbjct: 14   ITKDDDNFVSKGK-CSQDAPCFKEGKLMKPAERTSSSNNHGRELNDFAPTTIRVLSANQF 72

Query: 584  SSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNM 643
            + PTK +S RK++  + L  K+ K SEN + +Q N    S +DR+ S+K KLS CLS  +
Sbjct: 73   NMPTKVRSSRKLNTPKLLVEKDSKSSENIVNSQSNTVIPSFQDRVPSLKGKLSNCLSRYL 132

Query: 644  VRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKR 703
            VRRWC FEWF SAIDYPWF+ REFVEYL HVGL HIPRLTRVEWGVIRSSLGKPRR S++
Sbjct: 133  VRRWCVFEWFNSAIDYPWFAKREFVEYLEHVGLAHIPRLTRVEWGVIRSSLGKPRRFSEQ 192

Query: 704  FLHDEREKLKQYRES----------------------------RVIAIHPKTRELHDGSV 735
            FL +E+EKL QYRES                            R++A+HP+T E+HDGS+
Sbjct: 193  FLKEEKEKLYQYRESVREHYAELRAGTMDGLPTDLARPLSVGQRILALHPRTSEIHDGSI 252

Query: 736  LTIDHDKCRVQFDRPELGVEFVM---------------------------DIDSMPSNPL 768
            LT+DH +C VQFDRPELGVEFVM                           D+  MP NPL
Sbjct: 253  LTVDHSRCCVQFDRPELGVEFVMKHHLHMSVTWIPEYQAGCVFWMLTIVPDVHCMPLNPL 312

Query: 769  DNMPEAL-RRQISADKFSAISKELQVNGHP-NFGSPMLFASDGHLEKAPILPNT------ 820
            +NMP ++    I+ +++     EL++N  P        F+   +LE A  LP+T      
Sbjct: 313  ENMPASMIGHNIALNRYIKNLNELKINVRPAEKMEEFKFSPCENLEGASALPHTSPLTYP 372

Query: 821  ---LQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSE----- 872
               L +Q KG +  +  Q  ++  + V AQ +     C   QIQA+EA + ALSE     
Sbjct: 373  SSDLLQQPKGGLLGSNTQV-NIGGETVGAQPS----FCA--QIQAKEADIHALSELTQAL 425

Query: 873  ---EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCF 929
               EA++ ELK+ N+++LESQ  G+ SLKDSE  KKH A VL+QL E N+          
Sbjct: 426  DKKEAVVSELKHMNDEVLESQKHGDYSLKDSEVFKKHYAAVLLQLNEVNE---------- 475

Query: 930  GISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSWPMHP-ANV---- 984
                                       SSAL  +R+ NT+ + + P   + P AN+    
Sbjct: 476  -------------------------LVSSALFCLRERNTY-QGNIPHVLLKPGANIDEPA 509

Query: 985  ----KMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALD 1040
                    ++  +QESGS V EIV  SR KA TMVDAA++AM S+K+   +   I +A+D
Sbjct: 510  CHSSSFDSSTDDTQESGSHVVEIVESSRTKAQTMVDAAMQAMLSLKKEGSSIDSIEDAID 569

Query: 1041 HIDKRQLTSDPRVSVIRS---PEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKN 1097
             ++ +    D  V  IRS        G+L   +H  S   +P+  N+A   K  ++S +N
Sbjct: 570  FVNNKLSADDLSVPAIRSSIPAISAQGTLASQDHLSSCAANPEAINDAPDAKFNNLSAQN 629

Query: 1098 EAQIPSELITSCVATLLMIQTCTERHT-PADVAQIIDSAVSSLHPCCPQNLPIYREIEMC 1156
            E QIP+ELI+ CVATLLMIQ CTER   P+DVA ++DSAV+SL PCC  NLPIY EI+ C
Sbjct: 630  EVQIPTELISHCVATLLMIQRCTERQFPPSDVAVVLDSAVTSLKPCCSTNLPIYAEIQKC 689

Query: 1157 MGRIKTQILALIPT 1170
            MG I+ QILALIPT
Sbjct: 690  MGIIRNQILALIPT 703


>gi|356504038|ref|XP_003520806.1| PREDICTED: protein ALWAYS EARLY 2-like [Glycine max]
          Length = 931

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 304/651 (46%), Positives = 373/651 (57%), Gaps = 114/651 (17%)

Query: 556  EGSSVNDQNRASIDLVAPTGQAPVASPA-SSPTKHQSRRKMDLKRKLSSKEMKFSENSLK 614
            EG S   QNR  I L     +   A P   S TKH+SRRK  L+R  + KE K SE  LK
Sbjct: 355  EGKSTR-QNRDKIKLQGLKQKVDHAVPGVGSSTKHRSRRKTILQRPFTPKE-KSSEKILK 412

Query: 615  TQPNKNSLSQEDRLLSM-----KEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVE 669
            ++ NKN        L++     +EKLSGCLSS MVRRWC FEWFYSAIDYPWFS REF+E
Sbjct: 413  SKQNKNLTPVHGGALNILVGTYQEKLSGCLSSYMVRRWCMFEWFYSAIDYPWFSKREFME 472

Query: 670  YLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES----------- 718
            YLNHV LG IPRLTRVEW VIRSSLGKPRR S+RFLH ER+KL+QYRES           
Sbjct: 473  YLNHVDLGRIPRLTRVEWSVIRSSLGKPRRFSERFLHGERQKLEQYRESVRKYYDELRTG 532

Query: 719  -----------------RVIAIHP-KTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDI 760
                             RVIA H  KTRE+HDGSVLT+DHD  RVQFDRPELGV+ VMDI
Sbjct: 533  IRDGLPTDLSKPLCVGQRVIAFHSKKTREIHDGSVLTVDHDNYRVQFDRPELGVDSVMDI 592

Query: 761  DSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNT 820
            D MP NPLD MPE LR+QISA     ISK+    G+  FG  M + S G +EKAP   +T
Sbjct: 593  DCMPLNPLDTMPETLRQQISASNVPRISKKPHKKGNSRFGGNMTYNSSGPVEKAPTSSST 652

Query: 821  LQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSEEALLMELK 880
            L          AL + K                              +ALS   LL+ELK
Sbjct: 653  L----------ALAKPK------------------------------KALSPGKLLLELK 672

Query: 881  NTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFH 940
            N N++I+ +QN  ++   +   L + I   ++QLKEA+ Q   F  LC+      S + +
Sbjct: 673  NANSEIVGNQN--DADCFNDRRLSRSITPHVIQLKEASGQV--FNALCY------SRKHN 722

Query: 941  TLTWRRSLIDCFDMQASSALLQVRQCNTHPESSRP--SWPMHPANVKMLDNSHVSQESGS 998
            T   R                     N+ P    P  S+  H +    +D S V QE GS
Sbjct: 723  TEHIR---------------------NSPPPQMNPKASFDNHDSLPNTMDGSLV-QELGS 760

Query: 999  AVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRS 1058
            AV EI+ GS+L+AH MVDAA +A+SS KEGEDA T+I +ALD  D +QL ++ R+ VIRS
Sbjct: 761  AV-EIIKGSKLRAHAMVDAAFQALSSTKEGEDALTRIEQALDCADNQQLATNSRLPVIRS 819

Query: 1059 PEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQT 1118
              Q++GS  +HN  +S    P   NNASG KL + SDK   QI  +LITSCVAT + IQT
Sbjct: 820  QGQISGSFDYHNRSISHPSKPL-LNNASGRKLHNDSDKVNTQILLDLITSCVATGITIQT 878

Query: 1119 CTERHT-PADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALI 1168
            C  +   PADV  I D+AV+ LHP   +N  +YR+I+M M RIK+QILA I
Sbjct: 879  CANQQCPPADVTPIFDTAVTILHPRSLRNFHVYRDIQMHMQRIKSQILAHI 929



 Score =  248 bits (633), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/248 (55%), Positives = 182/248 (73%), Gaps = 17/248 (6%)

Query: 1   MAPTRKSRSV-NKRYANEVSPAKDVISPSKSKQKKK-LSDKLGPQWSKGELQRFYEAYRN 58
           MAPT+K R++ NKR+++EVS  KD +  SK+KQ+KK +SD+LGP+W  GEL +FYEAYR 
Sbjct: 1   MAPTKKPRTMKNKRFSSEVSTKKDEVGSSKNKQRKKNMSDELGPKWKAGELNQFYEAYRK 60

Query: 59  YGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
           +GKDW KVA  V +RSA+MVEALYN+++AYLSLP+ +AS VGLIAM+TDHY+++E SDSE
Sbjct: 61  HGKDWTKVAEIVSSRSAKMVEALYNISKAYLSLPKESASAVGLIAMITDHYSMVEESDSE 120

Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPRAVK 178
           RE ND     R+  KRK  K+QLS S + + QS S+A+             DG  P  V 
Sbjct: 121 RERNDVPG-SRQPMKRKCGKIQLSISNDSV-QSQSIASK------------DGIPPWPVA 166

Query: 179 KRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVS 238
           KRTPRFPV+ S K DDR++Y+  NK++ +S  DANDDE AHV  +A TEA+QRG SP+ S
Sbjct: 167 KRTPRFPVNDS-KPDDRENYVLPNKRNPKSMFDANDDEAAHVVTMASTEAAQRGVSPRES 225

Query: 239 QSPHKKTE 246
           Q+P+KK++
Sbjct: 226 QNPYKKSK 233



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 39/111 (35%)

Query: 380 FFGDESTALNALQTLADLSLMLPDSTMES------------------------------- 408
           +  D+S++++AL TLAD+ L++  STMES                               
Sbjct: 265 YLKDKSSSMDALLTLADMCLLVSTSTMESGKKGVFGIGDIHPGGVYIFSSVQILLFHYCV 324

Query: 409 --------ESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKA 451
                   ESSVQLKEE+ A   D+KS  PE  ST   ++KIK  G K+K 
Sbjct: 325 LILFLSHLESSVQLKEEKMAHKKDEKSVLPEGKSTRQNRDKIKLQGLKQKV 375


>gi|326524113|dbj|BAJ97067.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 705

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 323/730 (44%), Positives = 433/730 (59%), Gaps = 50/730 (6%)

Query: 1   MAPTRKSRSVNKRYA--NEVSPAKDVISPSKSK-QKKKLSDKLGPQWSKGELQRFYEAYR 57
           M+ TRK R+VNKRYA  NE  P KD     K+K +KKKLSD LG QWSK EL+ FY AYR
Sbjct: 3   MSSTRKVRNVNKRYAKINEDWPEKDATVVHKNKVRKKKLSD-LGSQWSKDELEHFYGAYR 61

Query: 58  NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
            YGKDW+KVA  V +R+++MVEALYNMNRAYLSLPEGTA+  GLIAMMTDHYN+++GS+S
Sbjct: 62  KYGKDWRKVAGAVHDRTSDMVEALYNMNRAYLSLPEGTATAAGLIAMMTDHYNILDGSNS 121

Query: 118 ERESNDASEMPRKSQKRKRAKVQLSASKE------DISQSWSMAATGGCLSLLKRSRIDG 171
           + ESN + +  RK QKR RAK+Q S SK       D+ QS   +++ GCLSLLK+ R  G
Sbjct: 122 DHESNGSPKTSRKPQKRGRAKLQ-SVSKTSDTRYPDLLQSQPASSSYGCLSLLKKKRSGG 180

Query: 172 NQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDAND-DEVAHVAALALTEASQ 230
           N+PRAV KRTPR PV+    +DD+     +   +R++  DAN+ DE   +AALAL E  Q
Sbjct: 181 NKPRAVGKRTPRVPVASMYHRDDK-----IGPSNRQAKPDANNGDEEGALAALALAEVCQ 235

Query: 231 RGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPE 290
           RGGSPQVSQ+  + +     SP +  D+    +E           E   PE  + +R  E
Sbjct: 236 RGGSPQVSQASGRSSGQMFLSPGKSIDRKNADSEMGSSKMHGFQVEADYPEGSLGSREAE 295

Query: 291 NGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSS 350
            G Y +     ++ EG  + +   K K+  +++ K  +  +   +D+ EACSGTEEG SS
Sbjct: 296 TGDYRKDASYFLNNEGSASGKSKPKVKRMQKRRKKAAQKTDDQFEDDREACSGTEEGYSS 355

Query: 351 RKGK-------VGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLS--LML 401
           RK K        GS+IS       P     KRS++LFFGDE +AL+AL TLAD+S  ++ 
Sbjct: 356 RKAKDEADVDVFGSKIS------WPSNKSNKRSRQLFFGDELSALDALHTLADISVNILQ 409

Query: 402 PDSTMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDI 461
           P S  ESESS Q K+E    + DDK S P   S    K+       K K  + I   E +
Sbjct: 410 PSSIAESESSAQFKDESKDNESDDKPSVPAAVSL-FDKKDKPRKTKKIKRQSEIASNEMV 468

Query: 462 IPRKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLE 521
             +K+KL +   +D  T    ++  +    M K+KRK   + KIS  E  T   +  + +
Sbjct: 469 TRKKAKLSKDHHHDGSTSEVKQDDCKCGVKMEKKKRKPS-TVKISKDEKNT---LKDSEK 524

Query: 522 SEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVAS 581
           +E  AEE    +SKG R +  S  SKQ K        +  D  + ++D V  T +  +  
Sbjct: 525 TEVSAEEGKVSSSKG-RHAHASPVSKQNKSKAQESSPAHADFGKEAMDTV-DTAENAITQ 582

Query: 582 PASSPTKHQSRRKMDLKRKLS--SKEMKFSENSLK--TQPNKNSLSQEDRLLSMKEKLSG 637
            + S +K +SRRK+ + + L+  SK  + +++S    + P  N       ++ +K+KLS 
Sbjct: 583 QSDSASKSKSRRKLGILKALAPESKPAEGADDSCDNVSYPVNN-------VIELKDKLSH 635

Query: 638 CLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKP 697
           CLSS  +RRWC  EWFYSAIDYPWF+  EFVEYLNHV LGH+PRLTRVEWGVIRSSLGKP
Sbjct: 636 CLSSRFLRRWCMSEWFYSAIDYPWFAKSEFVEYLNHVKLGHVPRLTRVEWGVIRSSLGKP 695

Query: 698 RRLSKRFLHD 707
           RRL K+FL +
Sbjct: 696 RRLPKQFLQE 705


>gi|6729048|gb|AAF27044.1|AC009177_34 unknown protein, 3' partial [Arabidopsis thaliana]
          Length = 618

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 298/638 (46%), Positives = 399/638 (62%), Gaps = 30/638 (4%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDV-ISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNY 59
           MAP RKSRSVNKR+ NE SP KD   S     +KKKLSDKLGPQW++ EL+RFY+AYR +
Sbjct: 1   MAPVRKSRSVNKRFTNETSPRKDAGKSKKNKLRKKKLSDKLGPQWTRLELERFYDAYRKH 60

Query: 60  GKDWKKVAAQVRN-RSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSE 118
           G++W++VAA +RN RS +MVEAL+NMNRAYLSLPEGTASV GLIAMMTDHY+VMEGS SE
Sbjct: 61  GQEWRRVAAAIRNSRSVDMVEALFNMNRAYLSLPEGTASVAGLIAMMTDHYSVMEGSGSE 120

Query: 119 RESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRID---GNQPR 175
            E +DASE+PRK QKRKRAK Q S S E++    S+ +  GCL+ LK++R +   G Q  
Sbjct: 121 GEGHDASEVPRKQQKRKRAKPQRSDSPEEVDIQQSIGSPDGCLTFLKQARANVHVGTQRH 180

Query: 176 AVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSP 235
           A  KRTPR PV  S  +DDR+   P NK+ R+   DANDD VAH  ALALT+AS+RGGSP
Sbjct: 181 ATGKRTPRVPVQTSFMRDDREGSTPPNKRARKQ-FDANDD-VAHFLALALTDASRRGGSP 238

Query: 236 QVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENGAYT 295
           +VS+SP+++TE   SSP++ W KM    ++       ++ EE    +R   R+ ++   T
Sbjct: 239 KVSESPNRRTELSDSSPIKSWGKMSRTRKSQSKHCGSSIFEEWMESSR--ERKLDSDKDT 296

Query: 296 RARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKV 355
                LMDME  G +E  RKGK+ Y+K++KVEE   + SDD GEACS T +GL S+  + 
Sbjct: 297 TL---LMDMERAGEMEAPRKGKRVYKKRVKVEEAECNDSDDNGEACSAT-QGLRSKSQRR 352

Query: 356 GSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSL-MLPDSTMESESSVQL 414
            + I  ++  + P +  +KR  K   G    A +ALQ LA+LS  MLP + MESE S QL
Sbjct: 353 KAAIEASREKYSP-RSPKKRDDKHTSG----AFDALQALAELSASMLPANLMESELSAQL 407

Query: 415 KEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGN 474
           KEERT +D+D+KSS PE TSTS   EK  ++ P +  L+ I+  E+   RKSK  R    
Sbjct: 408 KEERTEYDMDEKSSTPEATSTSSHGEKA-NVEPDDSLLHAISSVENANKRKSKPSRLVST 466

Query: 475 DVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFAS 534
           D + V   K QP+   S+ KRK       K+   EA  +    +++  + + ++ N   S
Sbjct: 467 DCDDVPTGKLQPQTSGSLRKRK------PKVLGDEAPAEFSQNKSINKKELPQDENNMKS 520

Query: 535 --KGKRTSQNSAQSKQWKPGRVLEGSSV-NDQNRASIDLVAPTGQAPVASPASSPTKHQS 591
             K KR  Q  AQSKQ K  + LE S++ +D+ R  +D+VA   Q   + P S   K  +
Sbjct: 521 LVKTKRAGQVPAQSKQMKTVKALEESAITSDKKRPGMDIVASPKQVSDSGPTSLSQKPPN 580

Query: 592 RRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLL 629
           RRK  L++ L  K  K SE + K   +  SLS+++ LL
Sbjct: 581 RRKKSLQKSLQEK-AKSSETTHKAARSSRSLSEQELLL 617


>gi|168011027|ref|XP_001758205.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690661|gb|EDQ77027.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1323

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 436/1399 (31%), Positives = 624/1399 (44%), Gaps = 333/1399 (23%)

Query: 1    MAPTRKSRSVNK---RYANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYR 57
            MA  R+ R+ +K   R A  V   +D I  SK + K+KL+D LGP WS+ +L+ FY+A+R
Sbjct: 1    MASARRPRTTSKPTTRIAGGVDRDEDGIGKSKFR-KRKLTDILGPPWSEEDLELFYQAFR 59

Query: 58   NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVM----- 112
             YGKDWKKV+A +  R+ EMVEALY  N+AYLSLP+G AS  GL AMMTDHYN++     
Sbjct: 60   KYGKDWKKVSASLHKRTTEMVEALYTTNKAYLSLPDGAASATGLKAMMTDHYNLLVNKCL 119

Query: 113  ---------------------------------EGSDSERESNDASEMPRKSQKRKRAKV 139
                                              G++S  +   + E     Q  K+   
Sbjct: 120  IPGKYIYMLKHPSACINAENLYANWSLYVENPSAGAESSDDCVGSDERSNHVQLSKKKVT 179

Query: 140  QLSASKEDISQSWSMAATG-GCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQKKDDRDDY 198
             +      I     + A+G G  S  KR R   N+P  V KRTPRF  S + ++  R   
Sbjct: 180  NIGMESSSIRSDGIVGASGFGGSSPAKRPRTYRNRP--VGKRTPRFQTSNASERRIRIIK 237

Query: 199  IPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKSSPVQIWDK 258
              ++K   R   D++ D      A A T  S++  SP  S +P +++   ++S  Q  DK
Sbjct: 238  ASVSKLQNRVEEDSDSD-----VAAARTLVSKQSASPTASNTPSRRSLR-QTSFQQNGDK 291

Query: 259  -----------MFPPAETAHPDAREALNEEGCPEARILNRRPENGAYTRARKSLMDMEGV 307
                       + P A T+  D +     EG PE++ L       A +   +S  D +  
Sbjct: 292  ESLWRTESDASVKPTASTSQADNQL----EGSPESKDLQNEGATKASSSTLRSDADRKTP 347

Query: 308  GTVEVHRKGKKFYRKKMKVE---------EVRNSLSDDEGEACSGTEEGLSSRKGKVGSE 358
               +   K KK + KK K +         + R    +D  E    +E     R+G    E
Sbjct: 348  TVGDAKSKLKKPFSKKTKFQNSDSKHQTSKSREKRKEDVKELVEASE-----RQGSGADE 402

Query: 359  ISNAKNDHLPLQM----------QRKRSKKLFFGDESTALNALQTLADLSLMLPDS---- 404
             +   +     Q           Q+KRS++LF GD ++ L+AL TLA  SL L       
Sbjct: 403  PAEGSSQPSSAQRRRRPVSPPPKQKKRSRQLFSGDSNSGLDALATLAASSLELEGLELGE 462

Query: 405  ----TMESESSVQLKEERTAFDIDDKSSAPEETSTSHPKEKIK-------HLGPKEKA-- 451
                   + +S + K E+       K S+PE  ++ H  +  +       H G KE+   
Sbjct: 463  NLNVVANAAASFEDKTEKVEIK-GGKQSSPEVANSKHDLKSSQAEDMQDLHNGSKEEEGD 521

Query: 452  LNTITE---AEDIIP-------RKSKLGRYSGNDVETVAEVKEQPEPPNSMSKRKRKSVL 501
            LNT  E   +ED  P       RK K  ++SG+ +  V  V   PE   S S      + 
Sbjct: 522  LNTEEEGAASEDRQPSTSPADSRKRKR-KHSGDKISKV--VASVPEGEASASPNPWTKL- 577

Query: 502  SKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVN 561
             KK++ ++ ++     + L                KR S++        PG    G  ++
Sbjct: 578  -KKLAGTKLLSSKQGHKLL----------------KRWSESGVADGADSPG---HGKQIS 617

Query: 562  DQNRA--SIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMK--FSENSLKTQP 617
             + R   SID+            +S P K +S++K  +  KL +++       NS    P
Sbjct: 618  MEGREDLSIDI----------DESSLPLKLRSKKK-GVPEKLPTEKTSAPVKSNSGFNSP 666

Query: 618  NKNSLSQEDRLL----------SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREF 667
            ++ S+ +E              S K K+  CL    VRRWC  EWFYSAID PWF+  EF
Sbjct: 667  HQESVRKEQAFCPHTTPELGTDSAKAKIIHCLCPK-VRRWCMCEWFYSAIDLPWFARNEF 725

Query: 668  VEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES--------- 718
            VEYLNH GLGH+PRLTRVEWGVIR SLGKPRRLSKRFL +EREKL+ YRES         
Sbjct: 726  VEYLNHAGLGHVPRLTRVEWGVIRGSLGKPRRLSKRFLQEEREKLETYRESVRTHYHELR 785

Query: 719  -------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMD 759
                               +VIA HPKTRE+HDGS+LT+D  +CRVQFDRPELGVE VMD
Sbjct: 786  NGLREGLPADLARPLTVGQKVIARHPKTREIHDGSILTVDRSRCRVQFDRPELGVELVMD 845

Query: 760  IDSMPSNPLDNMPEALRRQISADKFSAI-------SKELQVNGHPNFGSPMLFASDGHLE 812
            ID+MP  PL+N+PE +RR  ++     I       SK    N     G     A +  LE
Sbjct: 846  IDAMPMYPLENVPEVMRRHFTS--VEGIERTPGDDSKPRAWNASGGVGGVARAALNERLE 903

Query: 813  KAPIL--------------PNTLQ--KQAKGDMNHALPQAKSLAT-DIVSAQQAAYGQLC 855
            +   +               +TL   ++AK   N A+ +AK + T   V++Q+    Q  
Sbjct: 904  RRVTMLSQRFLSDLSKRAQTDTLDAVREAKEVTNRAVREAKDVTTKSAVASQRVGSHQPL 963

Query: 856  TVPQIQAREATVRALS--------EEALLMELKNTNNDILESQNGGESSLKDSEPLKKHI 907
               Q QA EA  RAL+        +EAL+MEL+  N +   +  G     K ++  ++  
Sbjct: 964  GGFQAQAIEADARALAELARALDKKEALVMELRQMNGEASCNWEG----FKAADNFQRQY 1019

Query: 908  ATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCN 967
            ATV++QLKE N                                    Q ++ALL +RQ N
Sbjct: 1020 ATVVLQLKEVNK-----------------------------------QVTNALLLLRQRN 1044

Query: 968  THPESSRPSW----------PMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDA 1017
             + +++   W             P+   +LD +        A+AE+   +R +A  MV  
Sbjct: 1045 KYHDNAVLPWHRLSSQGISDVAEPSEPWVLDTT-------CALAEVTISARKQASLMVST 1097

Query: 1018 AVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDP-RVSVIRSPE-QVNGSLG-------- 1067
            AVKAM ++K GEDA+ K+G AL+ I      S P ++S   +P  +V GS G        
Sbjct: 1098 AVKAMDTLKAGEDAFQKLGCALEAISVPGCVSVPLQLSPYPAPTCEVGGSQGVSTPSAQP 1157

Query: 1068 -------------HHNHFVSGTCD----------------PQPTNNASGTKLQDV----- 1093
                          ++   +GT                  P     A+   +QD+     
Sbjct: 1158 GSRVQSSSSSITEDNSEVDTGTVASTSRLSPVDKNGSAQRPAALEAAAQDLMQDLNHAAT 1217

Query: 1094 --SDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIY 1150
              S   +   P ELI SC+ATL M+QT +E   + A+V Q +DSA+ +L P   +N  IY
Sbjct: 1218 QSSASRDCLFPMELIKSCIATLFMLQTLSETPFSSAEVQQTLDSALRTLRPKSAKNHAIY 1277

Query: 1151 REIEMCMGRIKTQILALIP 1169
            +EIE     +K QI   IP
Sbjct: 1278 KEIEQQFATVKAQITTQIP 1296


>gi|19347724|gb|AAL86288.1| unknown protein [Arabidopsis thaliana]
          Length = 820

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 291/684 (42%), Positives = 395/684 (57%), Gaps = 66/684 (9%)

Query: 233 GSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREALNEEGCPEARILNRRPENG 292
           GSP+VS+SP+++TE   SSP++ W KM    ++       ++ EE    +R   R+ ++ 
Sbjct: 1   GSPKVSESPNRRTELSDSSPIKSWGKMSRTRKSQSKHCGSSIFEEWMESSR--ERKLDSD 58

Query: 293 AYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEACSGTEEGLSSRK 352
             T     LMDME  G +E  RKGK+ Y+K++KVEE   + SDD GEACS T+ GL S+ 
Sbjct: 59  KDTTL---LMDMERAGEMEAPRKGKRVYKKRVKVEEAECNDSDDNGEACSATQ-GLRSKS 114

Query: 353 GKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNALQTLADLSL-MLPDSTMESESS 411
            +  + I  ++  + P +  +KR  K   G    A +ALQ LA+LS  MLP + MESE S
Sbjct: 115 QRRKAAIEASREKYSP-RSPKKRDDKHTSG----AFDALQALAELSASMLPANLMESELS 169

Query: 412 VQLKEERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRY 471
            QLKEERT +D+D+KSS PE TSTS   EK  ++ P +  L+ I+  E+   RKSK  R 
Sbjct: 170 AQLKEERTEYDMDEKSSTPEATSTSSHGEKA-NVEPDDSLLHAISSVENANKRKSKPSRL 228

Query: 472 SGNDVETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNK 531
              D + V   K QP+   S+ KRK       K+   EA  +    +++  + + ++ N 
Sbjct: 229 VSTDCDDVPTGKLQPQTSGSLRKRK------PKVLGDEAPAEFSQNKSINKKELPQDENN 282

Query: 532 FAS--KGKRTSQNSAQSKQWKPGRVLEGSSV-NDQNRASIDLVAPTGQAPVASPASSPTK 588
             S  K KR  Q  AQSKQ K  + LE S++ +D+ R  +D+VA   Q   + P S   K
Sbjct: 283 MKSLVKTKRAGQVPAQSKQMKTVKALEESAITSDKKRPGMDIVASPKQVSDSGPTSLSQK 342

Query: 589 HQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWC 648
             +RRK  L++ L  K  K SE + K   +  SLS+++ LL  K+KL+  LS    RR C
Sbjct: 343 PPNRRKKSLQKSLQEK-AKSSETTHKAARSSRSLSEQELLL--KDKLATSLSFPFARRRC 399

Query: 649 TFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDE 708
            FEWFYSAID+PWFS  EFV+YLNHVGLGHIPRLTR+EW VI+SSLG+PRR S+RFLH+E
Sbjct: 400 IFEWFYSAIDHPWFSKMEFVDYLNHVGLGHIPRLTRLEWSVIKSSLGRPRRFSERFLHEE 459

Query: 709 REKLKQYRES----------------------------RVIAIHPKTRELHDGSVLTIDH 740
           REKLKQYRES                            RVIAIHPKTRE+HDG +LT+DH
Sbjct: 460 REKLKQYRESVRKHYTELRTGAREGLPTDLARPLAVGNRVIAIHPKTREIHDGKILTVDH 519

Query: 741 DKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFG 800
           +KC V FD  +LGVE VMDID MP NPL+ MPE LRRQI  DK  ++ KE Q++G+ N G
Sbjct: 520 NKCNVLFD--DLGVELVMDIDCMPLNPLEYMPEGLRRQI--DKCLSMKKEAQLSGNTNLG 575

Query: 801 SPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKSLATDIVSAQQAAYGQLCTV--- 857
             +LF   G LE      N    Q  GDM   +   K ++++  S +Q  +  + T    
Sbjct: 576 VSVLFPPCG-LENVSFSMNPPLNQ--GDMIAPILHGK-VSSNTSSPRQTNHSYITTYNKA 631

Query: 858 --PQIQAREATVRALSEEALLMEL 879
              +IQ  +A   AL E+ +  E+
Sbjct: 632 KEAEIQRAQALQHALDEKEMEPEM 655



 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 126/171 (73%), Gaps = 9/171 (5%)

Query: 1002 EIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQ 1061
            EIV GS+ +A  MVDAA+KA SSVKEGED  T I EAL+ + K QL    R S+++  E 
Sbjct: 657  EIVKGSKTRAQAMVDAAIKAASSVKEGEDVNTMIQEALELVGKNQLL---RSSMVKHHEH 713

Query: 1062 VNGSL-GHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCT 1120
            VNGS+  HHN   S   +P   N+ +    QD S+KN AQ+PSELITSCVAT LMIQ CT
Sbjct: 714  VNGSIEHHHNPSPSNGSEPVANNDLNS---QDGSEKN-AQMPSELITSCVATWLMIQMCT 769

Query: 1121 ER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            ER + PADVAQ+ID+AV+SL P CPQNLPIYREI+ CMGRIKTQI++L+PT
Sbjct: 770  ERQYPPADVAQLIDAAVTSLQPRCPQNLPIYREIQTCMGRIKTQIMSLVPT 820


>gi|110739970|dbj|BAF01889.1| hypothetical protein [Arabidopsis thaliana]
          Length = 569

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 253/589 (42%), Positives = 342/589 (58%), Gaps = 95/589 (16%)

Query: 633  EKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRS 692
            EK S C+SS   RRWC FEWFYSAIDYPWF+ +EFVEYL+HVGLGH+PRLTRVEWGVIRS
Sbjct: 25   EKFSHCISSFRARRWCIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRS 84

Query: 693  SLGKPRRLSKRFLHDEREKLKQYRES----------------------------RVIAIH 724
            SLGKPRR S++FL +E+EKL  YR+S                            RVI +H
Sbjct: 85   SLGKPRRFSEQFLKEEKEKLYLYRDSVRKHYDELNTGMREGLPMDLARPLNVSQRVICLH 144

Query: 725  PKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKF 784
            PK+RE+HDG+VLT+DH + R+QFD PELGVEFV D + MP NPL+NMP +L R  +   +
Sbjct: 145  PKSREIHDGNVLTVDHCRYRIQFDNPELGVEFVKDTECMPLNPLENMPASLARHYAFSNY 204

Query: 785  ---SAISKELQVNGHPNF--GSPMLFASDGHLEKAPI--LPNTLQKQAKGDMNHALPQAK 837
               + I +++      +   G P L    GHL  +P   + N+L KQ K D++ + PQA+
Sbjct: 205  HIQNPIEEKMHERAKESMLEGYPKLSCETGHLLSSPNYNISNSL-KQEKVDISSSNPQAQ 263

Query: 838  SLATDIVSAQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILES 889
                D   A Q    Q  ++ QIQAREA V+ALSE        E +L ELK  N++++ES
Sbjct: 264  D-GVDEALALQLFNSQPSSIGQIQAREADVQALSELTRALDKKELVLRELKCMNDEVVES 322

Query: 890  Q-NGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSL 948
            Q +G  ++LKDSE  KK  A VL QL E N+Q                            
Sbjct: 323  QKDGHNNALKDSESFKKQYAAVLFQLSEINEQV--------------------------- 355

Query: 949  IDCFDMQASSALLQVRQCNTH----PESS--RPSWPMHPANVKMLDNSHVSQESGSAVAE 1002
                    S ALL +RQ NT+    P SS  R S    P      ++++ S  +G  V+E
Sbjct: 356  --------SLALLGLRQRNTYQENVPYSSIRRMSKSGEPDGQLTYEDNNASDTNGFHVSE 407

Query: 1003 IVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQV 1062
            IV  SR+KA  MV  AV+A+  +++ E+    + EA+D ++  QL+ D           V
Sbjct: 408  IVESSRIKARKMVYRAVQALELLRKDENNNVNMEEAIDFVNN-QLSIDQT-----EGSSV 461

Query: 1063 NGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER 1122
              + G  +  +  T +P  +  A+ + L    D+N+ Q+PS+L++ C+ATLLMIQ CTER
Sbjct: 462  QQTQGGQDQRLPSTPNPPSSTPANDSHLNQ-PDQNDLQVPSDLVSRCIATLLMIQKCTER 520

Query: 1123 HTP-ADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
              P ++VAQ++DSAV+SL PCC QNLPIY EI+ CMG I+ QILAL+P+
Sbjct: 521  QFPPSEVAQVLDSAVASLQPCCSQNLPIYTEIQKCMGIIRNQILALVPS 569


>gi|302798497|ref|XP_002981008.1| hypothetical protein SELMODRAFT_420594 [Selaginella moellendorffii]
 gi|300151062|gb|EFJ17709.1| hypothetical protein SELMODRAFT_420594 [Selaginella moellendorffii]
          Length = 899

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 211/585 (36%), Positives = 298/585 (50%), Gaps = 95/585 (16%)

Query: 630  SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGV 689
            S K +L  CLS   VR+WC +EWFYSAID PWF+  EFVEYLNH GLGH+ +LTR EW V
Sbjct: 349  SAKARLLHCLSIPRVRQWCVYEWFYSAIDLPWFARNEFVEYLNHAGLGHVSKLTRTEWTV 408

Query: 690  IRSSLGKPRRLSKRFLHDEREKLKQYRES-----------------------------RV 720
            IRSSLGKPRRLS++FL  EREKL+ YR++                             RV
Sbjct: 409  IRSSLGKPRRLSQKFLQVEREKLEAYRDTVRAHYHDIRNDKSGCCLPPDLARPLTVGQRV 468

Query: 721  IAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQIS 780
            IA HPK  E+HDG +LT+D ++CRVQF+R ELGVEFV+DI++MP NPL+NM + +R++  
Sbjct: 469  IARHPKNGEIHDGRILTVDRNRCRVQFERTELGVEFVLDINAMPVNPLENMSDIMRKRRI 528

Query: 781  ADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPN-----TLQKQAKGD-MNHALP 834
             D        L  +GH         A +  L++    P+     TL  +A+ D ++  L 
Sbjct: 529  ID--------LSSSGHRIGAGNTRNALNDRLDRPYATPSQYFLSTLSHRAQMDNVDSVLL 580

Query: 835  QAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDI 886
               +    + + QQ   GQ  +  Q QAREA + AL+E        EALL+EL+  N++ 
Sbjct: 581  AKAAANEAVAAVQQ---GQPSSSIQAQAREADICALAELSRQLDKKEALLVELRRMNDEA 637

Query: 887  LESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRR 946
              S    ES L++SE  K   ATV++QLK  N Q                          
Sbjct: 638  DRSAGEAES-LRNSEAFKIQYATVVLQLKNVNKQV------------------------- 671

Query: 947  SLIDCFDMQASSALLQVRQCNTHPESSRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNG 1006
                      S+A++Q+R+ N + E+    W  H       D +     +GS   EI   
Sbjct: 672  ----------SAAVVQLRERNRYQENLVAPW--HSPPCAAADGAVAGLGAGSPAEEISLT 719

Query: 1007 SRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSL 1066
            +R  A +MV A V+A+  +KEGEDA +++G+  +++D +        +        +   
Sbjct: 720  TRKDARSMVSAFVQAVCCLKEGEDALSRLGKQHNYVDGQPAKEGGTGTGTGLGFGSSPPA 779

Query: 1067 GHHNH--FVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT 1124
             HH    F      PQ T   S           +A IP+E I SC+ TLLMI+TCTER  
Sbjct: 780  NHHQSQGFDKSQTLPQDTQATSQVPTAPYPPDIDAYIPAEFIASCLTTLLMIKTCTERQL 839

Query: 1125 -PADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALI 1168
             P+DVA + ++ + +L P    N  IY+E+E C   +K Q+ A +
Sbjct: 840  PPSDVAVMFENVLENLRPHNATNHQIYKEVEQCFDVLKNQVTAQV 884


>gi|302801462|ref|XP_002982487.1| hypothetical protein SELMODRAFT_421903 [Selaginella moellendorffii]
 gi|300149586|gb|EFJ16240.1| hypothetical protein SELMODRAFT_421903 [Selaginella moellendorffii]
          Length = 899

 Score =  327 bits (837), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 211/585 (36%), Positives = 299/585 (51%), Gaps = 95/585 (16%)

Query: 630  SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGV 689
            S K +L  CLS   VR+WC +EWFYSAID PWF+  EFVEYLNH GLGH+ +LTR EW V
Sbjct: 349  SAKARLLHCLSIPRVRQWCVYEWFYSAIDLPWFARNEFVEYLNHAGLGHVSKLTRTEWTV 408

Query: 690  IRSSLGKPRRLSKRFLHDEREKLKQYRES-----------------------------RV 720
            IRSSLGKPRRLS++FL  EREKL+ YR++                             RV
Sbjct: 409  IRSSLGKPRRLSQKFLQVEREKLEAYRDTVRAHYHDIRNDKSGCCLPPDLARPLTVGQRV 468

Query: 721  IAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQIS 780
            IA HPK  E+HDG +LT+D ++CRVQF+R ELGVEFV+DI++MP NPL+NM + +R++  
Sbjct: 469  IARHPKNGEIHDGRILTVDRNRCRVQFERTELGVEFVLDINAMPVNPLENMSDIMRKRRI 528

Query: 781  ADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPN-----TLQKQAKGD-MNHALP 834
             D        L  +GH         A +  L++    P+     TL  +A+ D ++  L 
Sbjct: 529  ID--------LSSSGHRIGAGNTRNALNDRLDRPYATPSQYFLSTLSHRAQMDNVDSVLL 580

Query: 835  QAKSLATDIVSAQQAAYGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDI 886
               +    + + QQ   GQ  +  Q QAREA + AL+E        EALL+EL+  N++ 
Sbjct: 581  AKAAANEAVAAVQQ---GQPSSSIQAQAREADICALAELSRQLDKKEALLVELRRMNDEA 637

Query: 887  LESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRR 946
              S    ES L++SE  K   ATV++QLK  N Q                          
Sbjct: 638  DRSAGEAES-LRNSEAFKIQYATVVLQLKNVNKQV------------------------- 671

Query: 947  SLIDCFDMQASSALLQVRQCNTHPESSRPSWPMHPANVKMLDNSHVSQESGSAVAEIVNG 1006
                      S+A++Q+R+ N + E+    W  H      +D +     +GS   EI   
Sbjct: 672  ----------SAAVVQLRERNRYQENLVAPW--HSPPCAAVDGAVAGLGAGSPAEEISLT 719

Query: 1007 SRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSL 1066
            +R  A +MV A V+A+  +KEGEDA +++G+  +++D +        +        +   
Sbjct: 720  TRKDARSMVSAFVQAVCCLKEGEDALSRLGKQHNYVDGQPAKEGGAGTGTGLGFGSSPPA 779

Query: 1067 GHHNHFVSGTCD--PQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTERHT 1124
             HH    S      PQ T   S           +A IP+E I SC+ TLLMI+TCTER  
Sbjct: 780  NHHQSQGSDKSQTLPQDTQATSQVPTAPYPPDIDAYIPAEFIASCLTTLLMIKTCTERQL 839

Query: 1125 -PADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALI 1168
             P+DVA + ++ + +L P    N  IY+E+E C   +K Q+ A +
Sbjct: 840  PPSDVAVMFENVLENLRPHNATNHQIYKEVEQCFDVLKNQVTAQV 884


>gi|224107355|ref|XP_002314456.1| predicted protein [Populus trichocarpa]
 gi|222863496|gb|EEF00627.1| predicted protein [Populus trichocarpa]
          Length = 406

 Score =  305 bits (782), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 201/418 (48%), Positives = 267/418 (63%), Gaps = 30/418 (7%)

Query: 1   MAPTRKSRSVNKRYAN--EVSPAKDV--ISPSKSKQKKKLSDKLGPQWSKGELQRFYEAY 56
           MAP+RK RSVNKRY+N  EVSP K+   I+     +K+KLS  LGPQW K EL++FY+AY
Sbjct: 1   MAPSRK-RSVNKRYSNIDEVSPNKNAAEIANKSRPRKRKLSKMLGPQWGKEELEQFYKAY 59

Query: 57  RNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSD 116
           R +GKDW+KVAA VRNRS  MVEALY MN+AYLSLP+G AS  GLIAMMTDHY+ +  SD
Sbjct: 60  RKHGKDWEKVAAVVRNRSVGMVEALYTMNKAYLSLPKGFASGAGLIAMMTDHYSNLGESD 119

Query: 117 SERESNDASEMPRKSQKRKRA-KVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQPR 175
           SE ESN  +   +K QKR R  K   +    D+ QS   A+  GCLSLLK+ R  G++P 
Sbjct: 120 SELESNGGTGPSQKPQKRARVTKGSEAPPVLDLLQSQPAASNYGCLSLLKKRR-SGSKPW 178

Query: 176 AVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQRGGSP 235
           AV KRTPR PV+YS  KD+ + Y+    +  +   DA DD+VAH  ALALTEASQRGGSP
Sbjct: 179 AVGKRTPRVPVTYSHDKDN-EKYVSPIWQGMKVKADAVDDDVAHEIALALTEASQRGGSP 237

Query: 236 QVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDAREA-LNEEGCPEARILNRRPENGAY 294
           QVSQ+P +KT+    SP Q  + M P +E      R + ++E GC E  + +     G Y
Sbjct: 238 QVSQTPKRKTK--TPSPAQHDELMHPESEMMSAKLRGSEMDEVGC-ELSLGSTDAYGGDY 294

Query: 295 TRARKSLMDMEGVGTVEVHRKGKKFY-RKKMKVEEVRNSLSDDEGEACSGTEEG--LSSR 351
            R R             +  KG++++ R+ ++VEE  ++  DD  EACSGTEEG  L + 
Sbjct: 295 ARDR-------------IFWKGRRYHGRRSLEVEENLDNHLDDVREACSGTEEGQKLEAV 341

Query: 352 KGKVGSEISNAKNDHLPLQMQRKRSKKLFFGD-ESTALNALQTLADLSLMLPDSTMES 408
           + K   E++ +K      +  RKRSKK+ FG+ E T  +AL+ LADLSL LP++++++
Sbjct: 342 EEKFEMEVAYSKLVR-SSKGSRKRSKKVLFGEVEDTDFDALEALADLSLRLPETSVDT 398


>gi|168037652|ref|XP_001771317.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677406|gb|EDQ63877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 780

 Score =  279 bits (714), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 274/855 (32%), Positives = 392/855 (45%), Gaps = 161/855 (18%)

Query: 1   MAPTRKSRSVNK---RYANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYR 57
           MA  R+ R+ +K   + A  V   +D    SKS+ K+KL+D LG  WSK +L+ FY+A+R
Sbjct: 1   MASARRPRTSSKPVAKIAGGVDRNEDGTEKSKSR-KRKLTDMLGSPWSKEDLEMFYQAFR 59

Query: 58  NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
            YGKDWKKV+A +  R+AEMVEALY  N+AYLSLPEG  S  GL AMMTDHYN+++ S S
Sbjct: 60  KYGKDWKKVSASLHKRTAEMVEALYTTNKAYLSLPEGDVSAAGLKAMMTDHYNLLDVSQS 119

Query: 118 --ERESNDASEMPRKSQKRKRAKVQLSASKED---ISQSWSMAATG-GCLSLLKRSRIDG 171
                S+D      +S      K  ++++  D   I     + A+G G  S +KR R   
Sbjct: 120 AGAESSDDGVGSEERSNYIPLTKKPVTSTGMDSSSIRFDGLLGASGFGGPSPVKRPRTSS 179

Query: 172 NQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEVAHVAALALTEASQR 231
             P  V KRTPRF    + +K  +   +P +K       D++ D      A A T  S+ 
Sbjct: 180 IGP--VGKRTPRFQTGKASEKRIKIIKVPDSKPQNVVEEDSDSD-----VAAARTLVSKP 232

Query: 232 GGSPQVS-----QSPHKKTEHGKSSPVQIWDK-----MFPPAETAHPDAREALNEEGCPE 281
             SP  S     +S  + + H       +W +     + P A T+  D +     +G PE
Sbjct: 233 TTSPSASNNLSRRSFRQSSVHQNGDKESLWRREPDGSVKPTASTSQADNQ----LDGSPE 288

Query: 282 ARILNRRPENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVRNSLSDDEGEAC 341
           +++L       A +    S  D +     ++  K KK + KK++++ +     DD+ EA 
Sbjct: 289 SKVLQNEGATKASSSTHTSDADRKTPKVGDIKSKLKKPFFKKIQLQNL-----DDKHEAA 343

Query: 342 -------SGTEEGL-SSRKGKVGSEISNAKNDHLPL-----------QMQRKRSKKLFFG 382
                     +E L ++ + ++G++     +   P              Q+KRS++LF G
Sbjct: 344 QIREKRKENVKELLEAAERQRIGADEPGEGSSPPPFVQRRRRPGSPPPKQKKRSRQLFSG 403

Query: 383 DESTA--------LNALQTLADLSLMLPD-----------STMESESSVQLKEERTAFDI 423
              T+        L+AL TLA  SL L             +T E+ +     + R    +
Sbjct: 404 GTYTSPAVVSNSGLDALATLAASSLELEGLEFGENLNFVPTTFEAYTEYLKPKARKQSSL 463

Query: 424 DDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDVETVAEVK 483
           D   + P+  S S   E+++ LG      N   E E         G     + E  +E +
Sbjct: 464 D--GTEPKHVSKSLRAEEMRSLG------NDNFEGE---------GDLKTEEEEAASEDR 506

Query: 484 EQPEPPNSMSKRKRKSVLSKKISNSEA-VTDTHMTRTL--ESEAVAEEH----NKFASKG 536
                P    KRKRK    K +  SE    D     +L  ++   AE+H    ++ +   
Sbjct: 507 RPCTSPADSKKRKRKFSGDKVLKQSEIDAVDGAGASSLGKQTPKNAEDHSMDIDESSLSP 566

Query: 537 KRTSQNSAQSKQWKPGRVLEGS-SVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKM 595
           K  S+ +  S++  P R+   S SVN  N                    SP +   RR  
Sbjct: 567 KLGSKKNGVSEKLLPERIGTPSKSVNGVN--------------------SPRQESKRR-- 604

Query: 596 DLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYS 655
                    E  F  +S          + E  L S K K+  CL    VRRWC  EWFYS
Sbjct: 605 ---------EKNFCPHS----------TPELGLTSAKAKIIHCLCPK-VRRWCMCEWFYS 644

Query: 656 AIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQY 715
           AID PWF+            LGH+PRLTR+EWGVIR SLGKPRRLSKRFL +EREKL+ Y
Sbjct: 645 AIDLPWFAR-----------LGHVPRLTRIEWGVIRGSLGKPRRLSKRFLQEEREKLETY 693

Query: 716 RESRVIAIHPKTRELHDG------SVLTIDHDKCRVQFD---RPELGVEFVMDIDSMPSN 766
           RES     H     L +G        LT+      +  +    PELGVE VMDID+MP+N
Sbjct: 694 RESVRTHYHELRTGLREGLPTDLARPLTVGQKSIVLAVECSLIPELGVELVMDIDAMPAN 753

Query: 767 PLDNMPEALRRQISA 781
            L NMPE +RR+ ++
Sbjct: 754 VLGNMPEVMRRRFTS 768


>gi|449490958|ref|XP_004158759.1| PREDICTED: uncharacterized protein LOC101229900 [Cucumis sativus]
          Length = 1408

 Score =  254 bits (649), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/378 (44%), Positives = 216/378 (57%), Gaps = 66/378 (17%)

Query: 34  KKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPE 93
           KKLSDKLGPQWSK E++ FYEAYR YG+DWKKVA+ +  RS EMVE LYNMN+AYLSLPE
Sbjct: 71  KKLSDKLGPQWSKEEIESFYEAYRKYGQDWKKVASSMHQRSTEMVETLYNMNKAYLSLPE 130

Query: 94  GTASVVGLIAMMTDHYNVMEGSDSERESNDAS---EMPRKSQKRKRAKVQLSASKEDISQ 150
           GTASVVGLIA+MTD+YNVM G+DSERE+ DAS   E+P+ +Q     +VQLS S E    
Sbjct: 131 GTASVVGLIALMTDYYNVMGGNDSERENYDASGFQELPKTNQ----VQVQLSISNEGHFS 186

Query: 151 SWSMAATGGCLSLLKRSRIDGNQPRAVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAV 210
           + S+AA+GGCLS L+   + GN+ R V KRTPR  +SY +++D  +++   NK  ++S  
Sbjct: 187 TRSVAASGGCLSSLR--SLYGNRLRVVGKRTPRVAISYLEERDKGENHASGNKCSQKSEF 244

Query: 211 DANDDEVAHVAALALTEASQRGGSPQVSQSPHKKTEHGKSSPVQIWDKMFPPAETAHPDA 270
           D   DEVAH AA AL EASQR  S   +  P K  E+ K S                   
Sbjct: 245 DVISDEVAHGAASALAEASQRIDS-SATFIPSKIKENMKFS------------------Y 285

Query: 271 REALNEEGCPEARILNRRPENGAYTRARKSLMDMEGVGTVEVHRKGKKFYRKKMKVEEVR 330
             +   +G P          N  Y     S +  E VGT + H K KK            
Sbjct: 286 EVSGGHKGRP----------NETYDYDLSSPVATECVGTEKTHHKMKK------------ 323

Query: 331 NSLSDDEGEACSGTEEGLSSRKGKVGSEISNAKNDHLPLQMQRKRSKKLFFGDESTALNA 390
                            LS  +GKV S+ SNA        +QRK+ +KL  GDE+T L+A
Sbjct: 324 ----------------RLSVLEGKVDSKSSNAVCVLSSSLVQRKKRRKLPHGDENTTLDA 367

Query: 391 LQTLADLSLMLPDSTMES 408
           LQ LAD+S M+P +TM+S
Sbjct: 368 LQILADVSSMIPFTTMKS 385



 Score =  212 bits (540), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/379 (35%), Positives = 197/379 (51%), Gaps = 90/379 (23%)

Query: 417 ERTAFDIDDKSSAPEETSTSHPKEKIKHLGPKEKALNTITEAEDIIPRKSKLGRYSGNDV 476
           E  +F+++DKS  PE T +    +       K+  +N +   ED +  K K G  +G  +
Sbjct: 484 ETESFNLEDKSYIPEGTLSDRSDKG------KQVMVNAMPNIEDRVRGKLKPG--NGLSI 535

Query: 477 ETVAEVKEQPEPPNSMSKRKRKSVLSKKISNSEAVTDTHMTRTLESEAVAEEHNKFASKG 536
           +  ++ K++ E P +M K KR  V    I +++   D H+   L +  +           
Sbjct: 536 DVASKRKKRLEHPGTMRKGKRNFV----IPDTKVPVDVHLREDLTTITL----------- 580

Query: 537 KRTSQNSAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTK--HQSRRK 594
                          GR+     + ++N+A++                 P K   +SR K
Sbjct: 581 ---------------GRI---KPLKNENQATL-----------------PIKLGRRSRCK 605

Query: 595 MDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFY 654
           M+L + L+ ++ KF ++ L  +  K S S + +   +K+KLS C+SS MVRRWC FEWFY
Sbjct: 606 MELWKLLTRQKTKFCDDKLGKELMKYSSSVQAKAFFLKDKLSNCMSSTMVRRWCIFEWFY 665

Query: 655 SAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQ 714
           SAIDYPWF+  EFVEYL+HVGLG I +LTRVEWG+IRSSLG+PRR S  FLH+ER KL++
Sbjct: 666 SAIDYPWFARSEFVEYLHHVGLGSITKLTRVEWGIIRSSLGRPRRFSDNFLHEERMKLQR 725

Query: 715 YRES----------------------------RVIAIHPKTR--ELHDGSVLTIDHDKCR 744
           YRES                            R+IA+HP     E+H+GSVL + HD  R
Sbjct: 726 YRESVRQYYGKLRAGICKGLPTDLARPLSVGQRIIALHPYPYRLEVHNGSVLRLQHDNYR 785

Query: 745 VQFDRPELGVEFVMDIDSM 763
           +QFD  E+GV+ VM   +M
Sbjct: 786 IQFDNQEIGVKPVMVPSTM 804



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 44/195 (22%)

Query: 958  SALLQVRQCNTHPESSRPSWPMHPANVKMLDNS----HVSQESGSAVAEIVNGSRLKAHT 1013
            S +  ++Q NT   +S     + PAN + L +     +VSQ SG    +IV GSR KA  
Sbjct: 802  STMFNLKQHNTFSGNS-----LAPANARALGSIPCSLNVSQGSGRGAVDIVQGSREKAQM 856

Query: 1014 MVDAAV------------------------KAMSSVKEGEDAYTKIGEALDHIDKRQLTS 1049
            MV+ A+                        + + S  +G+D  T I  AL H    Q +S
Sbjct: 857  MVNVAIEWCSNRIASAQVVGKVRFHDTIYFQVLLSKNDGDDPLTIIYGAL-HSSDNQNSS 915

Query: 1050 DPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVS----DKNEAQIPSEL 1105
                  +   + +   LG H        +  P+ + S   L  +     +++   IPS L
Sbjct: 916  FKVQKPLSMSQNMKDCLGAH------VKELFPSKHLSTADLSSLRSRHFNRDYRGIPSNL 969

Query: 1106 ITSCVATLLMIQTCT 1120
            ITSCVATLLMIQ+ +
Sbjct: 970  ITSCVATLLMIQSLS 984


>gi|224113199|ref|XP_002332634.1| predicted protein [Populus trichocarpa]
 gi|222832861|gb|EEE71338.1| predicted protein [Populus trichocarpa]
          Length = 196

 Score =  234 bits (596), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/170 (72%), Positives = 137/170 (80%), Gaps = 5/170 (2%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQ----KKKLSDKLGPQWSKGELQRFYEAY 56
           MAP RK +SVNKR+ NEVSP K+V S  KSKQ    KKKLSDKLGPQW K EL+RFY+AY
Sbjct: 1   MAPARK-KSVNKRFLNEVSPEKEVKSSGKSKQQVNGKKKLSDKLGPQWKKAELERFYKAY 59

Query: 57  RNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSD 116
           R+ GK+WKKVAA+VRNRS EMVEALYNMNRAYLSLPEGTASVVGLIAMM DHY+V+E SD
Sbjct: 60  RDNGKNWKKVAAEVRNRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMIDHYSVLEASD 119

Query: 117 SERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKR 166
           SERESN+   + RK QK KR KV LSASKED      + +T GCLSLLKR
Sbjct: 120 SERESNEMPGVLRKLQKHKRPKVLLSASKEDPQHFRMVGSTDGCLSLLKR 169


>gi|413919614|gb|AFW59546.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 303

 Score =  216 bits (550), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 140/339 (41%), Positives = 195/339 (57%), Gaps = 59/339 (17%)

Query: 851  YGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEP 902
            Y Q CT+ QIQ REA +RAL E        EALL+EL++ N ++   Q  GE  +KD E 
Sbjct: 2    YNQPCTLSQIQEREADIRALGELSRALDKKEALLVELRHMNEEVSGKQKDGEI-IKDLEH 60

Query: 903  LKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQ 962
             +K  A VLVQL+++NDQ                + F ++              ++ALL 
Sbjct: 61   FRKQYAMVLVQLRDSNDQ----------------VTFPSV--------------AAALLS 90

Query: 963  VRQCNTHPESSRPSWPMH----------PANVKMLDNSHVSQESGSAVAEIVNGSRLKAH 1012
            +RQ NT+  +S  S  M           P N+     S+++ ESGS V E++  S+ +A 
Sbjct: 91   LRQRNTYHGNSGQSKSMENGIALAGAPDPYNLF----SYINPESGSQVIEVIETSKSRAK 146

Query: 1013 TMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHF 1072
             MVD A++AM  V EGE+A++KIGEALDH++ R   S   +  IR   ++    G  N  
Sbjct: 147  MMVDVAIQAMCKVSEGENAFSKIGEALDHLNSRGTGSGSSILGIR---RIPPDSGQSNAS 203

Query: 1073 VSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQI 1131
                C   P  N+S ++L +  D +EAQ P ELI+SCVA +LMI+ CTE+ + PA+VA I
Sbjct: 204  YHDDCTAAPAANSS-SRLPNGCD-SEAQFPKELISSCVAMMLMIKNCTEKQYHPAEVAHI 261

Query: 1132 IDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            +DSA+SS+ PC  QN+PI+REIEMCMG IK Q+LALIPT
Sbjct: 262  LDSALSSVQPCSSQNIPIFREIEMCMGIIKNQMLALIPT 300


>gi|413919615|gb|AFW59547.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 298

 Score =  215 bits (548), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 191/339 (56%), Gaps = 64/339 (18%)

Query: 851  YGQLCTVPQIQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEP 902
            Y Q CT+ QIQ REA +RAL E        EALL+EL++ N ++   Q  GE  +KD E 
Sbjct: 2    YNQPCTLSQIQEREADIRALGELSRALDKKEALLVELRHMNEEVSGKQKDGEI-IKDLEH 60

Query: 903  LKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQ 962
             +K  A VLVQL+++NDQ                                    ++ALL 
Sbjct: 61   FRKQYAMVLVQLRDSNDQV-----------------------------------AAALLS 85

Query: 963  VRQCNTHPESSRPSWPMH----------PANVKMLDNSHVSQESGSAVAEIVNGSRLKAH 1012
            +RQ NT+  +S  S  M           P N+     S+++ ESGS V E++  S+ +A 
Sbjct: 86   LRQRNTYHGNSGQSKSMENGIALAGAPDPYNLF----SYINPESGSQVIEVIETSKSRAK 141

Query: 1013 TMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIRSPEQVNGSLGHHNHF 1072
             MVD A++AM  V EGE+A++KIGEALDH++ R   S   +  IR   ++    G  N  
Sbjct: 142  MMVDVAIQAMCKVSEGENAFSKIGEALDHLNSRGTGSGSSILGIR---RIPPDSGQSNAS 198

Query: 1073 VSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQI 1131
                C   P  N+S ++L +  D +EAQ P ELI+SCVA +LMI+ CTE+ + PA+VA I
Sbjct: 199  YHDDCTAAPAANSS-SRLPNGCD-SEAQFPKELISSCVAMMLMIKNCTEKQYHPAEVAHI 256

Query: 1132 IDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            +DSA+SS+ PC  QN+PI+REIEMCMG IK Q+LALIPT
Sbjct: 257  LDSALSSVQPCSSQNIPIFREIEMCMGIIKNQMLALIPT 295


>gi|218193382|gb|EEC75809.1| hypothetical protein OsI_12755 [Oryza sativa Indica Group]
 gi|222625429|gb|EEE59561.1| hypothetical protein OsJ_11849 [Oryza sativa Japonica Group]
          Length = 295

 Score =  209 bits (532), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/309 (42%), Positives = 177/309 (57%), Gaps = 50/309 (16%)

Query: 873  EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGIS 932
            EALL+EL++ N ++   Q  GE+  +D E  +K  A VLVQL+++ND             
Sbjct: 23   EALLVELRHMNEEVYGRQKDGEA-FRDFEHFRKQYAMVLVQLRDSNDHV----------- 70

Query: 933  CYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNT---HPESSRPSWPMHPANVKMLDN 989
                                    +SALL +RQ NT   HP  S P  PM    +    +
Sbjct: 71   ------------------------ASALLSLRQRNTYHGHPAQSYPK-PMENGALTGTPD 105

Query: 990  -----SHVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDK 1044
                  +++QESGS V E++  SR +A  MVD A++AM SV EGEDAY K+GEALD+++ 
Sbjct: 106  LYNLFGYINQESGSQVMEVIETSRSRAKLMVDVAIQAMCSVSEGEDAYAKVGEALDNLNN 165

Query: 1045 RQLTSDPRVSVIR--SPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIP 1102
            R   S   +  IR   P+    +  H ++  SG  DP  TNN S  +L +  D +E Q P
Sbjct: 166  RSTGSGSSILGIRRIPPDSGQANSSHQDNTTSGHFDPA-TNNISSPRLPNGCD-SEPQFP 223

Query: 1103 SELITSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIK 1161
            SELI+SCVAT+LMIQ CTE+ + PA+VA I+DSA+S L PC  QN+ I+REIEMCMG IK
Sbjct: 224  SELISSCVATILMIQNCTEKQYHPAEVAHILDSALSRLQPCSSQNVTIFREIEMCMGIIK 283

Query: 1162 TQILALIPT 1170
             Q+LALIPT
Sbjct: 284  NQMLALIPT 292


>gi|326507588|dbj|BAK03187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 272

 Score =  192 bits (488), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 169/305 (55%), Gaps = 50/305 (16%)

Query: 879  LKNTNNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQ 938
            L++ N ++   Q  GE+ ++D E  +K  A VLVQL+++ND                   
Sbjct: 2    LRHMNEEVSGKQKDGET-IRDLEHFRKQYAMVLVQLRDSNDHV----------------- 43

Query: 939  FHTLTWRRSLIDCFDMQASSALLQVRQCNT---HPESSRPSWPMHPANV--KMLDNS--- 990
                              +SALL +RQ NT   HP    P+          +  D S   
Sbjct: 44   ------------------ASALLCLRQRNTFHGHPAQPYPTKSTENGGAFNRTPDPSSNL 85

Query: 991  --HVSQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLT 1048
              +++QESGS V EI++ SR KA TMVD A++AM  V EGE+A+ KIGEALD+++ R   
Sbjct: 86   FGYINQESGSQVMEIIDTSRSKAKTMVDVAIQAMCKVSEGENAFAKIGEALDNLNLRGTG 145

Query: 1049 SDPRVSVIRSPEQVNGSLGHHNHFVSGTCDPQP--TNNASGTKLQDVSDKNEAQIPSELI 1106
            S   +  IR     +G     N   SG  DP    TNN S  ++      +EAQ PSELI
Sbjct: 146  SGSSILGIRRIPPDSGQANSDNS-ASGRFDPAAAATNNISSPRVLPNGSDSEAQFPSELI 204

Query: 1107 TSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQIL 1165
            +SCVAT+LMIQ CTE+ + PA+VA I+DSA+S L PC  QN+PI+REIEMCMG IK Q+L
Sbjct: 205  SSCVATILMIQNCTEKQYHPAEVAHILDSALSRLQPCSSQNVPIFREIEMCMGIIKNQML 264

Query: 1166 ALIPT 1170
            ALIPT
Sbjct: 265  ALIPT 269


>gi|357126282|ref|XP_003564817.1| PREDICTED: protein ALWAYS EARLY 2-like isoform 1 [Brachypodium
           distachyon]
          Length = 888

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/179 (50%), Positives = 107/179 (59%), Gaps = 30/179 (16%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSS 693
           K+  CLSS  +RRWCT+EWFYSA+DYPWF N EFV YLN   L H+ RLTR EW  IRSS
Sbjct: 488 KMLHCLSSESLRRWCTYEWFYSAVDYPWFLNNEFVNYLNFANLSHLSRLTRSEWSTIRSS 547

Query: 694 LGKPRRLSKRFLHDEREKLKQYRES----------------------------RVIAIHP 725
           LGKPRR S  FL  E+EKL+ YRE+                             VI  HP
Sbjct: 548 LGKPRRFSGHFLAVEKEKLEDYRENVRKYYAELSDDLRDSLPADLARPFSVGQHVIVRHP 607

Query: 726 KTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL--RRQISAD 782
            +REL DG V+  + D  +VQFDRP+LGV  V D D MP N LDN+P+ L  RR ++ D
Sbjct: 608 NSRELCDGKVVRTERDYYKVQFDRPDLGVALVKDTDCMPVNWLDNLPDDLKKRRSLTND 666



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 14/212 (6%)

Query: 1   MAPTRKSRSVNK---RYANEVSPAKDVISPSKSK----QKKKLSDKLGPQWSKGELQRFY 53
           M P + SR++ K   +  ++    +D  S SK+K    QK+K+SD LGP+WSK EL RFY
Sbjct: 1   MGPAKGSRTIPKITIKGFDDRQHNEDPTSSSKAKLKISQKRKMSD-LGPEWSKDELLRFY 59

Query: 54  EAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVME 113
           EAYR +GK+WKKV+A V  +SA+MVEALY+++R +LSLPE   + +G I ++T ++NV+ 
Sbjct: 60  EAYRQHGKNWKKVSAAVGGKSADMVEALYSVHRTFLSLPERDGTAMGFITLVTGYHNVLN 119

Query: 114 GSDSERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGNQ 173
            S   +ES+   +   K+++R  A  Q   +       +      G  S   + R  G  
Sbjct: 120 ESPRHKESDQKVKASGKARRRGDAAEQKENAAPHPQHDYQDMRICG-FSFAFKKRYFGEL 178

Query: 174 PRAVK-----KRTPRFPVSYSQKKDDRDDYIP 200
            R +K     KRTPR PV      +  D+  P
Sbjct: 179 VRYIKRNPVAKRTPRVPVMVPSDINATDNCTP 210



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 1/90 (1%)

Query: 1082 TNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLH 1140
            +N A+   L+  +  ++AQ+PS+LI  CVAT+L I+  +E R+ PA++A ++D A S L 
Sbjct: 790  SNQATHCSLESEAFLHDAQLPSDLILKCVATVLAIKDLSESRYPPANIAGVLDHAFSMLR 849

Query: 1141 PCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            P C +NL IY EIE C+  IK QIL L+PT
Sbjct: 850  PSCSENLTIYNEIESCISVIKNQILGLVPT 879


>gi|357126284|ref|XP_003564818.1| PREDICTED: protein ALWAYS EARLY 2-like isoform 2 [Brachypodium
           distachyon]
          Length = 850

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/179 (50%), Positives = 107/179 (59%), Gaps = 30/179 (16%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSS 693
           K+  CLSS  +RRWCT+EWFYSA+DYPWF N EFV YLN   L H+ RLTR EW  IRSS
Sbjct: 444 KMLHCLSSESLRRWCTYEWFYSAVDYPWFLNNEFVNYLNFANLSHLSRLTRSEWSTIRSS 503

Query: 694 LGKPRRLSKRFLHDEREKLKQYRES----------------------------RVIAIHP 725
           LGKPRR S  FL  E+EKL+ YRE+                             VI  HP
Sbjct: 504 LGKPRRFSGHFLAVEKEKLEDYRENVRKYYAELSDDLRDSLPADLARPFSVGQHVIVRHP 563

Query: 726 KTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL--RRQISAD 782
            +REL DG V+  + D  +VQFDRP+LGV  V D D MP N LDN+P+ L  RR ++ D
Sbjct: 564 NSRELCDGKVVRTERDYYKVQFDRPDLGVALVKDTDCMPVNWLDNLPDDLKKRRSLTND 622



 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 6/166 (3%)

Query: 40  LGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVV 99
           LGP+WSK EL RFYEAYR +GK+WKKV+A V  +SA+MVEALY+++R +LSLPE   + +
Sbjct: 4   LGPEWSKDELLRFYEAYRQHGKNWKKVSAAVGGKSADMVEALYSVHRTFLSLPERDGTAM 63

Query: 100 GLIAMMTDHYNVMEGSDSERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGG 159
           G I ++T ++NV+  S   +ES+   +   K+++R  A  Q   +       +      G
Sbjct: 64  GFITLVTGYHNVLNESPRHKESDQKVKASGKARRRGDAAEQKENAAPHPQHDYQDMRICG 123

Query: 160 CLSLLKRSRIDGNQPRAVK-----KRTPRFPVSYSQKKDDRDDYIP 200
             S   + R  G   R +K     KRTPR PV      +  D+  P
Sbjct: 124 -FSFAFKKRYFGELVRYIKRNPVAKRTPRVPVMVPSDINATDNCTP 168



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 1/90 (1%)

Query: 1082 TNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLH 1140
            +N A+   L+  +  ++AQ+PS+LI  CVAT+L I+  +E R+ PA++A ++D A S L 
Sbjct: 752  SNQATHCSLESEAFLHDAQLPSDLILKCVATVLAIKDLSESRYPPANIAGVLDHAFSMLR 811

Query: 1141 PCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            P C +NL IY EIE C+  IK QIL L+PT
Sbjct: 812  PSCSENLTIYNEIESCISVIKNQILGLVPT 841


>gi|326502138|dbj|BAK06561.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 885

 Score =  182 bits (463), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 86/176 (48%), Positives = 107/176 (60%), Gaps = 28/176 (15%)

Query: 633 EKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRS 692
           +KL  CLSS  +RRWCT+EWFYSA+DYPWF + EFV YLN   L H+ RLTR EW  IRS
Sbjct: 488 KKLLHCLSSESLRRWCTYEWFYSAVDYPWFMDNEFVNYLNFAKLSHLSRLTRSEWSTIRS 547

Query: 693 SLGKPRRLSKRFLHDEREKLKQYRES----------------------------RVIAIH 724
           SLGKPRR S  FL  E+EKL+ YR++                             VI  H
Sbjct: 548 SLGKPRRFSNHFLEAEKEKLEDYRQNVRKYYAELSDGLRDSLPTDLAQPFSVGQHVIVRH 607

Query: 725 PKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQIS 780
           P TREL DG V+ ++ D  +VQFD P LGV+ + D D MP N LDN+P+ L+++ S
Sbjct: 608 PSTRELADGKVVIMERDCYKVQFDSPYLGVDIIKDTDCMPVNWLDNLPDDLKKRSS 663



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 26/235 (11%)

Query: 1   MAPTRKSRSVNK---RYANEVSPAKDVISPSKSK----QKKKLSDKLGPQWSKGELQRFY 53
           M P + SR+++K   +   +    +D  S S  K     K+K SD L P WSK EL  FY
Sbjct: 1   MGPAKGSRTIHKITIKRHEDQQHHEDPTSSSNVKLKISHKRKRSD-LDPVWSKDELMHFY 59

Query: 54  EAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVME 113
           EAYR +GK+WKK++A V ++SA+ VEALY ++R +LSLPE   +  G IA++  H N +E
Sbjct: 60  EAYRRHGKNWKKISAVVGSKSADTVEALYYVHRTFLSLPEREGTAGGFIALVAGHDNALE 119

Query: 114 GSDSERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAAT------GGCLSLLKRS 167
            S S RE++   +M R S K +R + + +  KE+ +     A T       G  S  K+ 
Sbjct: 120 -SPSHRETD---QMVRSSGKGRR-RGEAAWQKENAAPHPHNAFTNQEMRIAGFTSSFKK- 173

Query: 168 RIDGNQPR-----AVKKRTPRFPVSYSQKKDDRDDYIPLNKKDRRSAVDANDDEV 217
           R  G   R      V+KRTPR PV      +  D+  P   K+  SA +  ++E+
Sbjct: 174 RYHGELVRYIRRNPVRKRTPRVPVLLPLDINATDNSTP-QIKNTVSATNKANEEI 227



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 1/76 (1%)

Query: 1097 NEAQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLHPCCPQNLPIYREIEM 1155
            ++AQ+PS LI +CVAT++ I+  +E RH PA +A +++ A S L P CPQNL IY +IE 
Sbjct: 802  DDAQLPSTLIENCVATVIAIKDLSEYRHPPAKIAGVLERAFSMLRPSCPQNLSIYADIES 861

Query: 1156 CMGRIKTQILALIPTS 1171
            C+G IK+QILAL+PT+
Sbjct: 862  CIGMIKSQILALVPTT 877


>gi|226504876|ref|NP_001140475.1| uncharacterized protein LOC100272535 [Zea mays]
 gi|194699652|gb|ACF83910.1| unknown [Zea mays]
          Length = 258

 Score =  182 bits (463), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/299 (39%), Positives = 166/299 (55%), Gaps = 56/299 (18%)

Query: 883  NNDILESQNGGESSLKDSEPLKKHIATVLVQLKEANDQACGFRELCFGISCYLSLQFHTL 942
            N ++   Q  GE  +KD E  +K  A VLVQL+++NDQ                      
Sbjct: 2    NEEVSGKQKDGEI-IKDLEHFRKQYAMVLVQLRDSNDQV--------------------- 39

Query: 943  TWRRSLIDCFDMQASSALLQVRQCNTHPESSRPSWPMH----------PANVKMLDNSHV 992
                          ++ALL +RQ NT+  +S  S  M           P N+     S++
Sbjct: 40   --------------AAALLSLRQRNTYHGNSGQSKSMENGIALAGAPDPYNLF----SYI 81

Query: 993  SQESGSAVAEIVNGSRLKAHTMVDAAVKAMSSVKEGEDAYTKIGEALDHIDKRQLTSDPR 1052
            + ESGS V E++  S+ +A  MVD A++AM  V EGE+A++KIGEALDH++ R   S   
Sbjct: 82   NPESGSQVIEVIETSKSRAKMMVDVAIQAMCKVSEGENAFSKIGEALDHLNSRGTGSGSS 141

Query: 1053 VSVIRSPEQVNGSLGHHNHFVSGTCDPQPTNNASGTKLQDVSDKNEAQIPSELITSCVAT 1112
            +  IR   ++    G  N      C   P  N+S ++L +  D +EAQ P ELI+SCVA 
Sbjct: 142  ILGIR---RIPPDSGQSNASYHDDCTAAPAANSS-SRLPNGCD-SEAQFPKELISSCVAM 196

Query: 1113 LLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
            +LMI+ CTE+ + PA+VA I+DSA+SS+ PC  QN+PI+REIEMCMG IK Q+LALIPT
Sbjct: 197  MLMIKNCTEKQYHPAEVAHILDSALSSVQPCSSQNIPIFREIEMCMGIIKNQMLALIPT 255


>gi|297596266|ref|NP_001042283.2| Os01g0193900 [Oryza sativa Japonica Group]
 gi|55773657|dbj|BAD72196.1| always early 1 protein -like [Oryza sativa Japonica Group]
 gi|55773686|dbj|BAD72244.1| always early 1 protein -like [Oryza sativa Japonica Group]
 gi|255672963|dbj|BAF04197.2| Os01g0193900 [Oryza sativa Japonica Group]
          Length = 833

 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 85/173 (49%), Positives = 107/173 (61%), Gaps = 28/173 (16%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSS 693
           +L  CLSS  +RRWCT+EWFYSA+DYPWF + EFV YLN   L H+ RLTR EW  IRSS
Sbjct: 428 RLQHCLSSESLRRWCTYEWFYSAVDYPWFMDNEFVNYLNFANLSHLSRLTRSEWSTIRSS 487

Query: 694 LGKPRRLSKRFLHDEREKLKQYRE----------------------------SRVIAIHP 725
           LGKPRR S  FL  E++KL+ YR+                             +VI  HP
Sbjct: 488 LGKPRRFSDHFLAAEKDKLENYRKKVRQYYALLSEDSWDSLPPDLARPFSIGQQVIVRHP 547

Query: 726 KTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ 778
            TREL DG V+ ++ D+  VQFDRP+LGV+ V D D MP N LDN+P+ L+++
Sbjct: 548 STRELCDGKVVMMEQDRYNVQFDRPDLGVDEVKDTDCMPVNWLDNLPDDLKKR 600



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 40  LGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVV 99
           LGPQWSK EL RFYEAYR +GK+WKKV+A V  +SA+ VEALY+++R +LSLPE   + +
Sbjct: 4   LGPQWSKDELMRFYEAYRRHGKNWKKVSASVGGKSADTVEALYSVHRTFLSLPEREGTAM 63

Query: 100 GLIAMMTDHYNVMEGSDSERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGG 159
           G +A++T H+NV +      + +D +       +++ A  Q         +S+    T G
Sbjct: 64  GFVALVTGHHNVSQDESKSHKGSDQTVRASGKVRKREATGQKEKEAPHAHRSYHERRTSG 123

Query: 160 CLSLLKR--SRIDGNQPR-AVKKRTPRFPVSY 188
             S  KR    +  N PR    KRTPR PV +
Sbjct: 124 LSSFKKRYYGELVKNIPRHPSGKRTPRVPVIF 155



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 1099 AQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCM 1157
            +++P  LI +C+ATLL I+  +E RH P ++A +++ A   L P C +NLPIY EIE  +
Sbjct: 750  SELPRNLIFNCIATLLAIKHFSEGRHPPPNIAGVLERACLMLRPSCAENLPIYNEIENFI 809

Query: 1158 GRIKTQILALIPTS 1171
              IK QILAL+P++
Sbjct: 810  AVIKNQILALVPSA 823


>gi|414875870|tpg|DAA53001.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 861

 Score =  179 bits (455), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 89/184 (48%), Positives = 110/184 (59%), Gaps = 29/184 (15%)

Query: 633 EKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRS 692
           +KL  CLSS  +RRWCT+EWFYSA+DYPWFSN EFV YL+H  L H+ RLTR EW  IRS
Sbjct: 465 KKLLHCLSSEPLRRWCTYEWFYSAVDYPWFSNNEFVHYLDHAKLSHLSRLTRSEWSAIRS 524

Query: 693 SLGKPRRLSKRFLHDEREKLKQYRE----------------------------SRVIAIH 724
           SLGKPRR S  FL  E+EKL+ YRE                             +VI  H
Sbjct: 525 SLGKPRRFSNHFLAVEKEKLEDYREKVRKIYAQLNDGSRDSLPADLARPFSIGQQVIVRH 584

Query: 725 PKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ-ISADK 783
           P +REL DG V+ +  D  +V FD P+LGV+ V D D MP N L N P+ +RR  +S D 
Sbjct: 585 PSSRELCDGKVVMMGPDCYKVHFDDPDLGVDTVKDTDCMPVNWLHNRPDNMRRNYLSNDV 644

Query: 784 FSAI 787
           ++ +
Sbjct: 645 YNIL 648



 Score =  114 bits (284), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 12/194 (6%)

Query: 1   MAPTRKSRSVNKR----YANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAY 56
           M P + SR++NK     Y ++        S    ++K+K+SD L P+WSK EL RFYEAY
Sbjct: 1   MGPAKGSRTINKTIVKGYEDQQQHDDPSSSSKAKQKKRKISD-LDPKWSKDELTRFYEAY 59

Query: 57  RNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSD 116
           R +GKDWKK++  +  +S++MV +LY+ +R +LSLPE  A+ +G IA++T H+N  E + 
Sbjct: 60  RQHGKDWKKISIAIGGKSSDMVRSLYSAHRTFLSLPEHQATAMGFIALVTGHHNASEKTT 119

Query: 117 SERESNDASEMPRKSQK-RKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSR---IDGN 172
           S R  +    + R S K RK  + Q S    D+        TG   S  KR     +  +
Sbjct: 120 SHRGYD---HIARASGKARKHGEQQKSIDGPDLHNCHEGEITGFSASFKKRYYGELVRNS 176

Query: 173 QPRAVKKRTPRFPV 186
           +  AV++RTP  PV
Sbjct: 177 RNHAVQRRTPLIPV 190



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)

Query: 1094 SDKNEAQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLHPCCPQNLPIYRE 1152
            SD    Q+PS+LI++C+AT++ I+  ++ RH   +VA +++ A+S L P CPQNL +Y E
Sbjct: 772  SDSRGVQLPSDLISNCIATVISIKRLSDSRHPFGNVAGVLEHALSMLRPSCPQNLGVYTE 831

Query: 1153 IEMCMGRIKTQILALIPTS 1171
            I+  +  I  QI AL+PT+
Sbjct: 832  IKRDLCTIANQIFALVPTA 850


>gi|242056091|ref|XP_002457191.1| hypothetical protein SORBIDRAFT_03g003005 [Sorghum bicolor]
 gi|241929166|gb|EES02311.1| hypothetical protein SORBIDRAFT_03g003005 [Sorghum bicolor]
          Length = 878

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/184 (47%), Positives = 110/184 (59%), Gaps = 29/184 (15%)

Query: 633 EKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRS 692
           +KL  CLSS  +RRWCT+EWFYSA+DYPWFSN EFV YL+H  L H+ +LTR EW  IRS
Sbjct: 478 KKLLHCLSSEPLRRWCTYEWFYSAVDYPWFSNNEFVHYLDHAKLSHLSKLTRSEWSAIRS 537

Query: 693 SLGKPRRLSKRFLHDEREKLKQYRES----------------------------RVIAIH 724
           SLGKPRR S  FL  E+EKL+ YRE                             +VI  H
Sbjct: 538 SLGKPRRFSNNFLAVEKEKLEDYREQVRKIYAQLSDGSRDSLPADLARPFSIGQQVIVRH 597

Query: 725 PKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRR-QISADK 783
           P +REL DG V+ +  D  +V FD P+LGV+ V D D MP N L N P+ +RR  +S + 
Sbjct: 598 PNSRELCDGKVVKLGPDCYKVHFDDPDLGVDIVKDTDCMPVNWLYNRPDNMRRVYLSNNA 657

Query: 784 FSAI 787
           +S +
Sbjct: 658 YSIL 661



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 1   MAPTRKSRSVNKRYANEVSPAK---DVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYR 57
           M P + SR++NK         +   D  S SK+KQKKK    L P+WSK EL+ FYEAYR
Sbjct: 13  MGPAKGSRTINKTIVKGYEDQQHHDDPSSSSKAKQKKKKISDLDPKWSKDELKNFYEAYR 72

Query: 58  NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
            +GKDWKK++  V  +S++MV +LY  +R +LSLPE  A+ +G IA++T H+N  E + S
Sbjct: 73  QHGKDWKKISIAVGGKSSDMVRSLYTSHRTFLSLPEREATAMGFIALVTGHHNASEKTTS 132

Query: 118 ERESNDASEMPRKSQK-RKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSR---IDGNQ 173
            R  +    + R S K RK  + Q S    D         +G   S  KR     +  ++
Sbjct: 133 HRGYD---HIVRASGKARKHGEQQKSIDGPDPHNCHEGKISGFSASFKKRYYGELVRNSR 189

Query: 174 PRAVKKRTPRFPVSYSQKKDDRDDYIP 200
             AV +RTPR PV     +   DD  P
Sbjct: 190 NHAVWRRTPRIPVIAPADRSTIDDATP 216



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 1082 TNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQIIDSAVSSLH 1140
            +N A+G            Q+PS+LI++CVAT L I+  ++  H    +  ++D A+S L 
Sbjct: 770  SNQATGCVGPGSESARGTQLPSDLISNCVATALSIKRLSDSWHEFDSITGVLDHALSMLR 829

Query: 1141 PCCPQNLPIYREIEMCMGRIKTQILALIPTSI 1172
            P CP+NL +Y++IE  +G + +QI A +PT++
Sbjct: 830  PSCPENLALYKQIERDIGILMSQIFARVPTAL 861


>gi|44021950|gb|AAS46631.1| At3g21440 [Arabidopsis thaliana]
 gi|45773856|gb|AAS76732.1| At3g21440 [Arabidopsis thaliana]
          Length = 193

 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/158 (60%), Positives = 113/158 (71%), Gaps = 4/158 (2%)

Query: 15  ANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNR 73
           A  VSP KD  S SK+KQ+K KLSD LGPQWSK EL+RFYE YR +GK+WKKVA  V +R
Sbjct: 17  AKAVSPHKDEESMSKTKQRKRKLSDMLGPQWSKEELERFYEGYRKFGKEWKKVAGFVHSR 76

Query: 74  SAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVME-GSDSERESNDASEMPRKSQ 132
           SAEMVEALY MN+AYLSLPEGTASVVGL AMMTDHY+V+  GSDSE+E+N+  E PR + 
Sbjct: 77  SAEMVEALYTMNKAYLSLPEGTASVVGLTAMMTDHYSVLHGGSDSEQENNEGIETPRSAP 136

Query: 133 KRKRAKV--QLSASKEDISQSWSMAATGGCLSLLKRSR 168
           KR R K     S   E +S      ++ G +  LK+ R
Sbjct: 137 KRSRVKSSDHPSIGLEGLSDRLQFRSSSGFMPSLKKRR 174


>gi|413947593|gb|AFW80242.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 1143

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/183 (46%), Positives = 107/183 (58%), Gaps = 28/183 (15%)

Query: 633 EKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRS 692
           +KL  CLSS  +RRWCT+EWFYSA+DYPWFS+ EFV YL+H  L H+ RLT  EWG IRS
Sbjct: 746 KKLLHCLSSEPLRRWCTYEWFYSAVDYPWFSSNEFVHYLDHAKLSHLSRLTIPEWGTIRS 805

Query: 693 SLGKPRRLSKRFLHDEREKLKQYRE----------------------------SRVIAIH 724
           SLG PRR S  FL  E+E L+ YRE                             +VI  H
Sbjct: 806 SLGIPRRFSNYFLAVEKENLEDYREKVRKIYAQLSDGSRDFLPADLARPFSIGQQVIVRH 865

Query: 725 PKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKF 784
           P +REL DG V+ +  D  +V FD P++GV+ V D D MP N L N P+ +R  +S D +
Sbjct: 866 PNSRELCDGKVVMMGPDCYKVHFDDPDIGVDIVKDTDCMPVNWLYNRPDNMRSCLSNDAY 925

Query: 785 SAI 787
           S +
Sbjct: 926 SIL 928



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 17/212 (8%)

Query: 1   MAPTRKSRSVNK---RYANEVSPAKDVISPSKSKQKK-KLSDKLGPQWSKGELQRFYEAY 56
           M P++ SR++NK   + +       D  S SK+KQK+ KLSD   P+WSK EL  FYEAY
Sbjct: 261 MGPSKGSRTINKIIVKGSEYQQQHDDPSSSSKAKQKRRKLSD-FDPKWSKDELTNFYEAY 319

Query: 57  RNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSD 116
           R YG DW+K++  +  +S++MV++L+ ++R +LSLPE  A+ +G IA++T H+N  E + 
Sbjct: 320 RQYGMDWRKISIAIGTKSSDMVQSLFTLHRTFLSLPEHQATAMGFIALVTGHHNASEKTT 379

Query: 117 SERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKRSRIDGN---- 172
           + R  +       K+  RK  +   S    D+        +G   S L +SR  G     
Sbjct: 380 THRGYDHVVRASGKA--RKHGEKPKSIDGPDLPNCQEAKISG--FSDLFQSRYYGVSSEL 435

Query: 173 ----QPRAVKKRTPRFPVSYSQKKDDRDDYIP 200
               +  AV++RTPR P   S  +   D+  P
Sbjct: 436 VRYIRNHAVRRRTPRIPAIVSADRSTIDEATP 467



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 1/92 (1%)

Query: 1082 TNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLH 1140
            +N  +G           AQ+PS+LI++ +AT+L I++ ++ RH  A+VA ++D A S L 
Sbjct: 1042 SNQVAGCAGPGFEPARGAQLPSDLISNGIATVLSIKSLSDSRHPFANVAGVLDHACSMLR 1101

Query: 1141 PCCPQNLPIYREIEMCMGRIKTQILALIPTSI 1172
            P CPQNL +Y +I+  +G IKTQI AL+PT++
Sbjct: 1102 PSCPQNLALYDQIKRDIGIIKTQIFALMPTAL 1133


>gi|224123186|ref|XP_002330360.1| predicted protein [Populus trichocarpa]
 gi|222871564|gb|EEF08695.1| predicted protein [Populus trichocarpa]
          Length = 159

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 103/140 (73%), Gaps = 3/140 (2%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSL 91
           QK+KLS+ LGPQW K EL+RFY+AYR +GKDW+KVAA VRNRS EMVEALY MN+AYLSL
Sbjct: 1   QKRKLSEMLGPQWGKEELERFYKAYRKHGKDWEKVAAAVRNRSVEMVEALYTMNKAYLSL 60

Query: 92  PEGTASVVGLIAMMTDHYN--VMEGSDSERESNDASEMPRKSQKRKRA-KVQLSASKEDI 148
           P+G AS  GLIAMMTDHY+  V  G+DSE ESN  +   RKSQKR R  K   +    D+
Sbjct: 61  PKGFASAAGLIAMMTDHYSNLVRLGNDSEIESNGGTGTSRKSQKRARVTKGSDAPPVPDL 120

Query: 149 SQSWSMAATGGCLSLLKRSR 168
            QS   A+  GCLSLLK+ R
Sbjct: 121 LQSQPAASNYGCLSLLKKRR 140


>gi|218187674|gb|EEC70101.1| hypothetical protein OsI_00746 [Oryza sativa Indica Group]
          Length = 850

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 101/162 (62%), Gaps = 27/162 (16%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSS 693
           +L  CLSS  +RRWCT+EWFYSA+DYPWF + EFV YLN   L H+ RLTR EW  IRSS
Sbjct: 466 RLQHCLSSESLRRWCTYEWFYSAVDYPWFMDNEFVNYLNFANLSHLSRLTRSEWSTIRSS 525

Query: 694 LGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTID-------------- 739
           LGKPRR S  FL  E++KL+ YR+        K R+ +  ++L+ D              
Sbjct: 526 LGKPRRFSDHFLAAEKDKLENYRK--------KVRQYY--ALLSEDSWDSLPPDLARPFS 575

Query: 740 ---HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ 778
               D+  VQFDRP+LGV+ V D D MP N LDN+P+ L+++
Sbjct: 576 IGQQDRYNVQFDRPDLGVDEVKDTDCMPVNWLDNLPDDLKKR 617



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 110/194 (56%), Gaps = 7/194 (3%)

Query: 1   MAPTRKSRSVNK---RYANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYR 57
           M P + SR++ K   +  ++    +D  S SK K KK+    LGPQWSK EL RFYEAYR
Sbjct: 1   MGPAKGSRTITKITIKGYDDRQHDEDPNSSSKVKLKKRKMSDLGPQWSKDELMRFYEAYR 60

Query: 58  NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
            +GK+WKKV+A V  +SA+ VEALY+++R +LSLPE   + +G +A++T H+NV + S S
Sbjct: 61  RHGKNWKKVSASVGGKSADTVEALYSVHRTFLSLPEREGTAMGFVALVTGHHNVSDESKS 120

Query: 118 ERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKR--SRIDGNQPR 175
            + S+       K +KR+ A  Q         +S+    T G  S  KR    +  N  R
Sbjct: 121 HKGSDQTVRASGKVRKRE-ATGQKEKEAPHAHRSYHERRTSGLSSFKKRYYGELVKNITR 179

Query: 176 -AVKKRTPRFPVSY 188
               KRTPR PV +
Sbjct: 180 HPSGKRTPRVPVIF 193



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 1082 TNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLH 1140
            +N A+  K  +      +++P  LI +C+ATLL I+  +E RH P ++A +++ A   L 
Sbjct: 750  SNEATDCKGPEPESAANSELPRNLIFNCIATLLAIKHFSEGRHPPPNIAGVLERACLMLR 809

Query: 1141 PCCPQNLPIYREIEMCMGRIKTQILALIPTS 1171
            P C +NLPIY EIE  +  IK QILAL+P++
Sbjct: 810  PSCAENLPIYNEIENFIAVIKNQILALVPSA 840


>gi|222617910|gb|EEE54042.1| hypothetical protein OsJ_00722 [Oryza sativa Japonica Group]
          Length = 850

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 101/162 (62%), Gaps = 27/162 (16%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSS 693
           +L  CLSS  +RRWCT+EWFYSA+DYPWF + EFV YLN   L H+ RLTR EW  IRSS
Sbjct: 466 RLQHCLSSESLRRWCTYEWFYSAVDYPWFMDNEFVNYLNFANLSHLSRLTRSEWSTIRSS 525

Query: 694 LGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTID-------------- 739
           LGKPRR S  FL  E++KL+ YR+        K R+ +  ++L+ D              
Sbjct: 526 LGKPRRFSDHFLAAEKDKLENYRK--------KVRQYY--ALLSEDSWDSLPPDLARPFS 575

Query: 740 ---HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ 778
               D+  VQFDRP+LGV+ V D D MP N LDN+P+ L+++
Sbjct: 576 IGQQDRYNVQFDRPDLGVDEVKDTDCMPVNWLDNLPDDLKKR 617



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/194 (40%), Positives = 111/194 (57%), Gaps = 7/194 (3%)

Query: 1   MAPTRKSRSVNK---RYANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYR 57
           M P + SR++ K   +  ++    +D  S SK K KK+    LGPQWSK EL RFYEAYR
Sbjct: 1   MGPAKGSRTITKITIKGYDDRQHDEDPNSSSKVKLKKRKMSDLGPQWSKDELMRFYEAYR 60

Query: 58  NYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDS 117
            +GK+WKKV+A V  +SA+ VEALY+++R +LSLPE   + +G +A++T H+NV + S S
Sbjct: 61  RHGKNWKKVSASVGGKSADTVEALYSVHRTFLSLPEREGTAMGFVALVTGHHNVSDESKS 120

Query: 118 ERESNDASEMPRKSQKRKRAKVQLSASKEDISQSWSMAATGGCLSLLKR--SRIDGNQPR 175
            + S+       K +KR+ A  Q         +S+    T G  S  KR    +  N PR
Sbjct: 121 HKGSDQTVRASGKVRKRE-ATGQKEKEAPHAHRSYHERRTSGLSSFKKRYYGELVKNIPR 179

Query: 176 -AVKKRTPRFPVSY 188
               KRTPR PV +
Sbjct: 180 HPSGKRTPRVPVIF 193



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 1099 AQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLHPCCPQNLPIYREIEMCM 1157
            +++P  LI +C+ATLL I+  +E RH P ++A +++ A   L P C +NLPIY EIE  +
Sbjct: 767  SELPRNLIFNCIATLLAIKHFSEGRHPPPNIAGVLERACLMLRPSCAENLPIYNEIENFI 826

Query: 1158 GRIKTQILALIPTS 1171
              IK QILAL+P++
Sbjct: 827  AVIKNQILALVPSA 840


>gi|384246827|gb|EIE20316.1| hypothetical protein COCSUDRAFT_67577 [Coccomyxa subellipsoidea
           C-169]
          Length = 1024

 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 96/168 (57%), Gaps = 27/168 (16%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSS 693
           KL  CL +   RRW   E+FYS +D  WF   E  E+L HVG+ H  +LTR EW  +R+ 
Sbjct: 530 KLRRCLDAR-TRRWAAAEFFYSGLDRAWFMQTELPEFLRHVGIPHGTKLTRTEWAALRAG 588

Query: 694 LGKPRRLSKRFLHDEREKLKQYRES--------------------------RVIAIHPKT 727
           LG PRRLS  FL +ER +L+ +RES                          RV A HP T
Sbjct: 589 LGNPRRLSLNFLREERGRLEAFRESVRRKYQEVGYNTEVPAEFPRQLAVSQRVTARHPVT 648

Query: 728 RELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL 775
           R+LHDG +LTI  D  RVQFDR ELGVE V D+D MP +P +++P ++
Sbjct: 649 RQLHDGDILTIAPDCYRVQFDRRELGVELVKDVDVMPIDPHESLPSSI 696



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 44  WSKGELQRFYEAYRN----YGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVV 99
           WS+ E + F+ A+         +W+KVA  V ++ A   EALY+  + YLSLP    +  
Sbjct: 34  WSQEEGRSFFSAFGKCNGPSASNWQKVAKAVSSKDAAACEALYHRFQTYLSLPRDLQNQT 93

Query: 100 GLIAMMTDHYNVMEGSD 116
             +A++ D +N +   D
Sbjct: 94  VFLALIRDMHNQVTNGD 110



 Score = 44.7 bits (104), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 1094 SDKNEAQIPSELITSCVATLLMIQTCTERH-TPADVAQIIDSAVSSLHPCCPQNLPIYRE 1152
             D  EA   S+L+  CV+ L+ +  CTE   + A V + +DSA++SL P    N P   +
Sbjct: 951  GDPTEAAWLSDLVNGCVSMLITVHQCTESEASTAYVQKALDSALASLTPRAAANRPFLAD 1010

Query: 1153 IEMCMGRIKTQIL 1165
            I+  +  +K  ++
Sbjct: 1011 IQNSVDLLKQHLI 1023


>gi|297601373|ref|NP_001050734.2| Os03g0639200 [Oryza sativa Japonica Group]
 gi|255674734|dbj|BAF12648.2| Os03g0639200, partial [Oryza sativa Japonica Group]
          Length = 154

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/153 (54%), Positives = 104/153 (67%), Gaps = 5/153 (3%)

Query: 1021 AMSSVKEGEDAYTKIGEALDHIDKRQLTSDPRVSVIR--SPEQVNGSLGHHNHFVSGTCD 1078
            AM SV EGEDAY K+GEALD+++ R   S   +  IR   P+    +  H ++  SG  D
Sbjct: 1    AMCSVSEGEDAYAKVGEALDNLNNRSTGSGSSILGIRRIPPDSGQANSSHQDNTTSGHFD 60

Query: 1079 PQPTNNASGTKLQDVSDKNEAQIPSELITSCVATLLMIQTCTER-HTPADVAQIIDSAVS 1137
            P  TNN S  +L +  D  E Q PSELI+SCVAT+LMIQ CTE+ + PA+VA I+DSA+S
Sbjct: 61   PA-TNNISSPRLPNGCDS-EPQFPSELISSCVATILMIQNCTEKQYHPAEVAHILDSALS 118

Query: 1138 SLHPCCPQNLPIYREIEMCMGRIKTQILALIPT 1170
             L PC  QN+ I+REIEMCMG IK Q+LALIPT
Sbjct: 119  RLQPCSSQNVTIFREIEMCMGIIKNQMLALIPT 151


>gi|307110950|gb|EFN59185.1| hypothetical protein CHLNCDRAFT_138086 [Chlorella variabilis]
          Length = 801

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 32/193 (16%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSS 693
           +L  CL     +RW   E+ YSA+D P+F        L  +GLG   RLTR EW +IRSS
Sbjct: 237 RLRHCLQQPRTQRWAAAEFCYSALDRPFFMFNPLAGLLAQLGLGEGARLTRREWCLIRSS 296

Query: 694 LGKPRRLSKRFLHDEREKLKQYRES-----------------------------RVIAIH 724
           LGKPRRLS +FL +ER +L+++R+                              RV+A H
Sbjct: 297 LGKPRRLSLKFLKEERVRLERWRDGCRQQYQSGAAAVAHPKVADHLPLPLGVGQRVVARH 356

Query: 725 PKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQISADKF 784
           P TR+LHDGSVLT  H+  RVQFDR ELGVE V D D MP+ P +N+P AL   ++    
Sbjct: 357 PATRQLHDGSVLTAAHNCYRVQFDRQELGVELVRDTDVMPAEPSENLPPAL---LAGRPH 413

Query: 785 SAISKELQVNGHP 797
             ++    +NG P
Sbjct: 414 MVLNGRQIINGQP 426



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 44  WSKGELQRFYEAYRNYGKDWKKVAAQV-RNRSAEMVEALYNMNRAYLSLPEGTASVVGLI 102
           W+  E  RF+ A+  +G+DW +VA  V   R  E  EAL+   +AYLS+P+   S    +
Sbjct: 9   WAPDEAARFFAAFHEHGQDWAQVAQTVGGGRQGEACEALFRRQQAYLSIPQQLQSAQAFV 68

Query: 103 AMMTD 107
           AM+ +
Sbjct: 69  AMVEN 73


>gi|302835359|ref|XP_002949241.1| hypothetical protein VOLCADRAFT_89488 [Volvox carteri f.
           nagariensis]
 gi|300265543|gb|EFJ49734.1| hypothetical protein VOLCADRAFT_89488 [Volvox carteri f.
           nagariensis]
          Length = 1361

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 94/200 (47%), Gaps = 59/200 (29%)

Query: 618 NKNSLSQEDRLLSMKEK-LSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGL 676
           N  +  +  R +   E  L  CL    VRRWCT+E+ YSA+D PWF   E +   +    
Sbjct: 628 NSTASGETSRAMPAAEAALRHCLGPR-VRRWCTYEFLYSALDRPWFLRNELLLPTS---- 682

Query: 677 GHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES------------------ 718
               +LTR+EW V+R+SLG+PRRLS  FL +ER +L+ YR++                  
Sbjct: 683 ----KLTRLEWSVLRASLGRPRRLSLAFLREERLRLEGYRQAPRRPYCRPYFHTSTALHR 738

Query: 719 -------------------------------RVIAIHPKTRELHDGSVLTIDHDKCRVQF 747
                                           V A HP +R+L+DG +LT+  +K RVQF
Sbjct: 739 PPTEHARLKYEEVALGMEVPHELPRQLRVGQEVTARHPHSRQLYDGVILTVKGNKYRVQF 798

Query: 748 DRPELGVEFVMDIDSMPSNP 767
            R +L  E ++D D MP +P
Sbjct: 799 HRGDLMTEVILDTDVMPVDP 818


>gi|145353899|ref|XP_001421236.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145353971|ref|XP_001421270.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581473|gb|ABO99529.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581507|gb|ABO99563.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 794

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 84/187 (44%), Gaps = 43/187 (22%)

Query: 643 MVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSK 702
           + RRW    +F +  D  WF +  F  +L H+G G +   TR EW  +R  L K RRLS 
Sbjct: 321 LTRRWANANFFTAGTDKGWFEDSGFSRWLQHIGKGDMRVATREEWQKVRRKLPKTRRLSL 380

Query: 703 RFLHDEREKLKQYRES---------------------------------------RVIAI 723
           +FL DER  L+ +R +                                        V+A+
Sbjct: 381 KFLKDERVDLEYFRHAAREMTNLKLHGTVLTDELKALMLKWTGGVPVPSPLEVGQTVLAV 440

Query: 724 HPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNP----LDNMPEALRRQI 779
           HP+    + G++L ++   CRVQF RPELGVE V DID MP +     +D +      QI
Sbjct: 441 HPRFHSPYIGNILIVERATCRVQFARPELGVELVRDIDIMPVDANQEEMDLIAAGTAEQI 500

Query: 780 SADKFSA 786
             + F+A
Sbjct: 501 ENEAFNA 507


>gi|308811925|ref|XP_003083270.1| Retinoblastoma pathway protein LIN-9/chromatin-associated protein
           Aly (ISS) [Ostreococcus tauri]
 gi|116055149|emb|CAL57545.1| Retinoblastoma pathway protein LIN-9/chromatin-associated protein
           Aly (ISS) [Ostreococcus tauri]
          Length = 717

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 39/160 (24%)

Query: 643 MVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSK 702
           + RRW    +F +A D  W+ +  F  +L  +G G + + TR EW  IR  L K RRLS 
Sbjct: 328 LTRRWANANFFTAATDKSWYEDSGFARWLESIGKGDVRKATRQEWRNIRRKLPKTRRLSL 387

Query: 703 RFLHDEREKLKQYRES---------------------------------------RVIAI 723
           +FL DER  L+  R +                                        V A+
Sbjct: 388 KFLKDERVDLECCRRAAREMTELKLQGKTVTEDIKAKMLKWTGGLEVTAPLEVGQTVFAV 447

Query: 724 HPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSM 763
           HP+ R  + G++L ++H +CRVQF RPELGVE V D+D M
Sbjct: 448 HPRFRSPYIGNILIVEHAQCRVQFARPELGVELVRDVDIM 487


>gi|440804115|gb|ELR24993.1| Myblike DNA-binding domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 678

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 79/171 (46%), Gaps = 34/171 (19%)

Query: 631 MKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVI 690
           ++  L+  + S    +W  +EWF + +D P+F   +F   LN +GLGHI  LTRVEWG +
Sbjct: 325 IQTTLTNFMKSERTAKWSMYEWFCADMDRPFFEYNDFQHCLNEMGLGHITHLTRVEWGHV 384

Query: 691 RSSLGKPRRLSKRFLHDEREKLKQYRES------------------------------RV 720
           RS +GKPRR S+ FL  ER KL  YR +                                
Sbjct: 385 RSVMGKPRRFSQAFLQGERAKLHDYRANIRELRNGKSPISRSFYPPVSEIPLPMPIGVHA 444

Query: 721 IAIHPKTRELHDGSVLTIDHDKCRVQF-DR---PELGVEFVMDIDSMPSNP 767
           +A HP  R L  G V+ +   + +V F D+     LG  +V D D M   P
Sbjct: 445 LAFHPSQRRLSRGVVIAVGDGQYQVDFIDKQMNANLGGIWVADTDLMTHEP 495



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 43/67 (64%)

Query: 41  GPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVG 100
           G  W++ E+ +FY   R +G+ WKK+A++++NR+ EMV ALY  N  YLSLP    S + 
Sbjct: 76  GAPWTEAEVTQFYHGLRQHGRAWKKIASELKNRTPEMVAALYEQNGGYLSLPPEHTSALA 135

Query: 101 LIAMMTD 107
           L  ++ D
Sbjct: 136 LYKIIAD 142


>gi|224123526|ref|XP_002330143.1| predicted protein [Populus trichocarpa]
 gi|222871599|gb|EEF08730.1| predicted protein [Populus trichocarpa]
          Length = 61

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 50/55 (90%)

Query: 33 KKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRA 87
          KKKLSDKLGPQW K EL+RFY+AYR+ GK+WKKVAA+VRNRS EMVEALYNMNR 
Sbjct: 1  KKKLSDKLGPQWKKAELERFYKAYRDNGKNWKKVAAEVRNRSVEMVEALYNMNRV 55


>gi|146176546|ref|XP_001019965.2| DIRP family protein [Tetrahymena thermophila]
 gi|146144679|gb|EAR99720.2| DIRP family protein [Tetrahymena thermophila SB210]
          Length = 634

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 69/144 (47%), Gaps = 35/144 (24%)

Query: 646 RWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFL 705
           +W   E+FYS ID P+F   EF E L  VGL +I +LTR EW +IR ++GKPRR S  F+
Sbjct: 293 QWIEHEFFYSTIDKPFFQFNEFKEMLAKVGLENIGKLTRAEWNIIRKAMGKPRRFSNEFV 352

Query: 706 HDEREKLKQYRE-----------------------------------SRVIAIHPKTREL 730
             E +KL+ YR+                                     V+ IHP  +  
Sbjct: 353 RGELKKLEIYRKIVREYLQTQQAHVLRSKIRESLSEEIMRIQPFKVGQIVMGIHPNCKHF 412

Query: 731 HDGSVLTIDHDKCRVQFDRPELGV 754
           H GSVLT + D   ++F   +LGV
Sbjct: 413 HPGSVLTTNGDMVILKFLTNDLGV 436


>gi|168037654|ref|XP_001771318.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677407|gb|EDQ63878.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 405

 Score = 91.7 bits (226), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 158/375 (42%), Gaps = 111/375 (29%)

Query: 860  IQAREATVRALSE--------EALLMELKNTNNDILESQNGGESSLKDSEPLKKHIATVL 911
            +Q+REA V AL+E        EAL++E +  N+D   S+ G     K  E  ++  ATV+
Sbjct: 51   LQSREAEVWALAELSRALDKKEALVLEFRQMNDDASSSRGG----FKTPETFQRQYATVV 106

Query: 912  VQLKEANDQACGFRELCFGISCYLSLQFHTLTWRRSLIDCFDMQASSALLQVRQCNTHPE 971
            +QLKE N+Q                                    + ALLQ+RQ N + +
Sbjct: 107  LQLKEVNEQV-----------------------------------TYALLQLRQRNKYQD 131

Query: 972  SSRPSW----------PMHPANVKMLDNSHVSQESGSAVAEIVNGSRLKAHTMVDAAVKA 1021
            ++ P W             P+    LD + V       ++EI   +R +A  MV  AVKA
Sbjct: 132  NAAPPWYWLITQGSLDAAEPSEPWALDRTPV-------LSEIAVSARKQADLMVFTAVKA 184

Query: 1022 MSSVKEGEDAYTKIGEALDHIDKRQLTSDP-RVSVIRSPEQVN-------------GSLG 1067
            M ++K GEDA  K+G ALD I      S P ++S+  +P                 GSL 
Sbjct: 185  MDNLKTGEDALQKLGCALDAISVPGSVSAPLQLSLYPAPTSEGDVPQDACTPSAQPGSLV 244

Query: 1068 H---------HNHFVSGTCD----------PQPTNNASGTKL--QDVS-DKNEAQIPSEL 1105
                      ++   +GT             +P    +  K+  QD++ D N  +     
Sbjct: 245  QSSSSSITEDNSEVDTGTVAISSRLSQADISEPGQRPATLKVAAQDLTQDLNHTETQQSA 304

Query: 1106 ITSC----------VATLLMIQTCTER-HTPADVAQIIDSAVSSLHPCCPQNLPIYREIE 1154
            I  C          VATL M+QT ++R  + A++ Q +DSA+ +L P   +N  I+++IE
Sbjct: 305  IKDCTFPVELMTSCVATLFMLQTLSDRPSSAAEMQQTLDSALLTLRPKSSKNNAIFKDIE 364

Query: 1155 MCMGRIKTQILALIP 1169
                 +K QI   IP
Sbjct: 365  QQFASVKAQITTQIP 379


>gi|328870511|gb|EGG18885.1| RmlC-like cupin family protein [Dictyostelium fasciculatum]
          Length = 801

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 13/105 (12%)

Query: 646 RWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFL 705
           +W   EWFYS ID P+F   EF  +LN  G+G I +L+R+EW  +RS + KPRRLS+RF 
Sbjct: 382 KWALCEWFYSDIDAPFFFYNEFQMWLNQNGIGSIKKLSRMEWNQVRSRMKKPRRLSQRFF 441

Query: 706 HDEREKLKQYRES-----------RVIAIHPKTRELH--DGSVLT 737
            + REKL Q R+            + I I P ++ L+  D S+L+
Sbjct: 442 EEAREKLYQTRDKIRQSMLTNDLFKFIQIEPDSKVLYIKDNSLLS 486


>gi|412986784|emb|CCO15210.1| predicted protein [Bathycoccus prasinos]
          Length = 1010

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 75/177 (42%), Gaps = 46/177 (25%)

Query: 644 VRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIP--RLTRVEWGVIRSSLGKPRRLS 701
            R+W   EWF    D  WF+  +F  +  H  +      + +R +W  +R SLGK RRLS
Sbjct: 469 TRKWALAEWFMPGTDEDWFARNDFKRFAKHCDINETAWSKQSRKKWRDVRKSLGKVRRLS 528

Query: 702 KRFLHDEREKLKQYRES------------------------------------------R 719
             FL DER +L+ +R +                                          R
Sbjct: 529 IPFLRDERIRLEYHRNAARAKVEANLKGKMLSKEEIEKLAAPNDTAELIPIPEPFIVGQR 588

Query: 720 VIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALR 776
           V+A HP  +  + GSVLT+     RVQFD P+LG E + DID M   P     EALR
Sbjct: 589 VLAKHPLAKRAYVGSVLTVSKLNIRVQFDDPQLGSELIKDIDVMRLGP--EYEEALR 643



 Score = 48.5 bits (114), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 12/97 (12%)

Query: 40  LGPQWSKGELQRFYEA-----------YRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAY 88
           LGP+W++ E   F+             Y  +  ++  +AA+   RS +    +Y+ N+A+
Sbjct: 43  LGPRWNEEECVAFFNGLKEERDGFENTYSEHIPNFDSIAAKT-GRSVKECVNMYDKNQAF 101

Query: 89  LSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDAS 125
           LSLP+G AS   L A+  D+++ +E +  E+ + + S
Sbjct: 102 LSLPDGVASAAALHALTRDYFDNLEKAAKEKAARNKS 138


>gi|403365746|gb|EJY82664.1| hypothetical protein OXYTRI_19723 [Oxytricha trifallax]
          Length = 1094

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 81/184 (44%), Gaps = 61/184 (33%)

Query: 641 SNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSL----GK 696
           S  V RW   E+FYS ID P+F N +F + L    L ++ +L  +EW ++R ++    GK
Sbjct: 494 SKAVMRWMKCEYFYSWIDRPYFLNSDFKQLLAKADLENV-KLNSLEWSIVRIAIAGATGK 552

Query: 697 PRRLSKRFLHDE-----------REKLK------------------------QYRE---- 717
           PRR S +F+ DE           RE +K                        Q+ E    
Sbjct: 553 PRRFSDQFISDEKQKLNIYREIFREIIKAMQQKNFIPDQNGDLQMFHYDKKPQFEEEKVK 612

Query: 718 -----------------SRVIAIHPKTRELHDGSVLTIDHDKCRVQFDRPELGVEFVMDI 760
                             RV+A+HPKT+EL   S+LT D      QFDRPELGV  + D+
Sbjct: 613 EVVQLIRDYQIAPLVVSQRVLALHPKTKELRTASLLTTDVKSYHAQFDRPELGVIVINDL 672

Query: 761 DSMP 764
             +P
Sbjct: 673 QLIP 676



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 7/75 (9%)

Query: 40  LGPQWSKGELQRFYEAYRNYGKDWKKVAAQVR-----NRSAEMVEALYNMNRAYLSLPEG 94
           LGP+WS  E+Q F+E +R+ GKDW+ +  ++      +R+ + +++LY+ ++ YL L   
Sbjct: 41  LGPRWSSEEIQLFFETFRDCGKDWESILNELHTQGFTHRTKDHIKSLYSKHKTYLKL--A 98

Query: 95  TASVVGLIAMMTDHY 109
           TAS   L A+MTD+Y
Sbjct: 99  TASAQDLTAIMTDYY 113


>gi|348524879|ref|XP_003449950.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog [Oreochromis
           niloticus]
          Length = 587

 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 75/174 (43%), Gaps = 35/174 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + EF   L         R LTRVEWG IR
Sbjct: 148 RLRNLLKLPKAHKWCIYEWFYSNIDRPLFEGDNEFCLCLKETFPNLKTRKLTRVEWGTIR 207

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRES-RVI--------------------------AIH 724
             +GKPRR S  F  +ER  L+Q R+  R++                           + 
Sbjct: 208 RLMGKPRRCSSAFFAEERTALRQKRQKMRLLQQRKLTDLSNCKDLPDEIPLPLIIGTKVT 267

Query: 725 PKTRELHDG----SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
            + R LHDG     +  +D      RV FDR  LG   V D + + + P + MP
Sbjct: 268 ARLRGLHDGLFTGQIDAVDTSAATYRVTFDRTGLGTHTVPDYEVLSNEPNETMP 321


>gi|113676649|ref|NP_001038411.1| protein lin-9 homolog [Danio rerio]
 gi|82078241|sp|Q5RHQ8.1|LIN9_DANRE RecName: Full=Protein lin-9 homolog
          Length = 543

 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 42/229 (18%)

Query: 585 SPTKHQSRRKM---DLKRKLSSKEMKFSENSLKTQPNK-NSLSQEDRLLSMK--EKLSGC 638
           +PT+   R ++   D +R ++S+  + S+  + T P K  +++  D+ +S K   +L   
Sbjct: 52  TPTRSSKRSRLSCEDEERPIASRSPRRSQR-VTTMPQKLTNVATPDKRVSQKIGLRLRNL 110

Query: 639 LSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGK 696
           L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GK
Sbjct: 111 LKLPKAHKWCIYEWFYSNIDRPLFEGDNDFCLCLKESFPNLKTRKLTRVEWGTIRRLMGK 170

Query: 697 PRRLSKRFLHDEREKLKQYRESR-------------------------VIA--IHPKTRE 729
           PRR S  F  +ER  LKQ R+                           VI   +  + R 
Sbjct: 171 PRRCSSAFFAEERMALKQKRQKMRLLQQRKITDMSLCKDLPDEIPLPLVIGTKVTARLRG 230

Query: 730 LHDG----SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
           +HDG     +  +D      RV FDR  LG   V D + + + P + MP
Sbjct: 231 VHDGLFTGQIDAVDTSAATYRVTFDRNGLGTHTVPDYEVLSNEPHETMP 279


>gi|334322316|ref|XP_001376942.2| PREDICTED: protein lin-9 homolog [Monodelphis domestica]
          Length = 558

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 105/237 (44%), Gaps = 41/237 (17%)

Query: 579 VASPASSPTKHQSRRKM---DLKRKLSSKEMKFSEN-SLKTQPNKNSLSQEDRLLSMK-- 632
            AS    P ++  R ++   D  R+LS++  K ++  ++  Q    ++S  D+  S K  
Sbjct: 63  TASSVEMPFRNSKRSRLFCEDDDRQLSTRSPKRNQRVAMVPQKFTATMSTPDKKASQKIG 122

Query: 633 EKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVI 690
            +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG I
Sbjct: 123 FRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKI 182

Query: 691 RSSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------I 723
           R  +GKPRR S  F  +ER  LKQ R+       R +A                     +
Sbjct: 183 RRLMGKPRRCSSAFFEEERAALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKV 242

Query: 724 HPKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
             + R +HDG     +  +D  +   RV FDR  LG   V D + + + P + MP A
Sbjct: 243 TARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTVPDYEVLSNEPHETMPIA 299


>gi|189217540|ref|NP_001121233.1| lin-9 homolog [Xenopus laevis]
 gi|169642142|gb|AAI60738.1| LOC100158306 protein [Xenopus laevis]
          Length = 562

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 127 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 186

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE-------------------------SRVIA--IH 724
             +GKPRR S  F  +ER  L+Q R+                         S VI   + 
Sbjct: 187 RLMGKPRRCSAAFFEEERSALEQKRQKIRLLQQRKVADVSQFKDLPDEIPLSLVIGTKVT 246

Query: 725 PKTRELHDG------SVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R LHDG        +   +   RV FDR  LG   + D + + + P + MP A
Sbjct: 247 ARLRGLHDGLFTGQIDAVDTQNYTYRVTFDRNGLGTHTIPDYEVLSNEPHETMPMA 302


>gi|115528103|gb|AAI24704.1| Lin9 protein [Danio rerio]
 gi|197247116|gb|AAI65696.1| Lin9 protein [Danio rerio]
          Length = 494

 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 42/229 (18%)

Query: 585 SPTKHQSRRKM---DLKRKLSSKEMKFSENSLKTQPNK-NSLSQEDRLLSMK--EKLSGC 638
           +PT+   R ++   D +R ++S+  + S+  + T P K  +++  D+ +S K   +L   
Sbjct: 3   TPTRSSKRSRLSCEDEERPIASRSPRRSQR-VTTMPQKLTNVATPDKRVSQKIGLRLRNL 61

Query: 639 LSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGK 696
           L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GK
Sbjct: 62  LKLPKAHKWCIYEWFYSNIDRPLFEGDNDFCLCLKESFPNLKTRKLTRVEWGTIRRLMGK 121

Query: 697 PRRLSKRFLHDEREKLKQYRESR-------------------------VIA--IHPKTRE 729
           PRR S  F  +ER  LKQ R+                           VI   +  + R 
Sbjct: 122 PRRCSSAFFAEERMALKQKRQKMRLLQQRKITDMSLCKDLPDEIPLPLVIGTKVTARLRG 181

Query: 730 LHDG----SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
           +HDG     +  +D      RV FDR  LG   V D + + + P + MP
Sbjct: 182 VHDGLFTGQIDAVDTSAATYRVTFDRNGLGTHTVPDYEVLSNEPHETMP 230


>gi|326677271|ref|XP_002664674.2| PREDICTED: protein lin-9 homolog [Danio rerio]
          Length = 493

 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 42/229 (18%)

Query: 585 SPTKHQSRRKM---DLKRKLSSKEMKFSENSLKTQPNK-NSLSQEDRLLSMK--EKLSGC 638
           +PT+   R ++   D +R ++S+  + S+  + T P K  +++  D+ +S K   +L   
Sbjct: 2   APTRSSKRSRLSCEDEERPIASRSPRRSQR-VTTMPQKLTNVATPDKRVSQKIGLRLRNL 60

Query: 639 LSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGK 696
           L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GK
Sbjct: 61  LKLPKAHKWCIYEWFYSNIDRPLFEGDNDFCLCLKESFPNLKTRKLTRVEWGTIRRLMGK 120

Query: 697 PRRLSKRFLHDEREKLKQYRESR-------------------------VIA--IHPKTRE 729
           PRR S  F  +ER  LKQ R+                           VI   +  + R 
Sbjct: 121 PRRCSSAFFAEERMALKQKRQKMRLLQQRKITDMSLCKDLPDEIPLPLVIGTKVTARLRG 180

Query: 730 LHDG----SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
           +HDG     +  +D      RV FDR  LG   V D + + + P + MP
Sbjct: 181 VHDGLFTGQIDAVDTSAATYRVTFDRNGLGTHTVPDYEVLSNEPHETMP 229


>gi|432113948|gb|ELK36013.1| Protein lin-9 like protein [Myotis davidii]
          Length = 596

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 162 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 221

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 222 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADLSQFKDLPDEIPLPLVIGTKVT 281

Query: 725 PKTRELHDGSVL-TIDH-DKC----RVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     ID  D C    RV FDR  LG   + D + + + P + MP A
Sbjct: 282 ARLRGVHDGLFTGQIDAVDTCNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 337


>gi|344278587|ref|XP_003411075.1| PREDICTED: protein lin-9 homolog [Loxodonta africana]
          Length = 762

 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 45/169 (26%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEWGVIRSSLGKPRR 699
           +WC +EWFYS ID P F  + +F   L        P     +LTRVEWG IR  +GKPRR
Sbjct: 340 KWCIYEWFYSNIDKPLFEGDNDFCVCLKE----SFPNLKTRKLTRVEWGKIRRLMGKPRR 395

Query: 700 LSKRFLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHD 732
            S  F  +ER  LKQ R+       R +A                     +  + R +HD
Sbjct: 396 CSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPEEIPLPLVIGTKVTARLRGVHD 455

Query: 733 G-------SVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           G       +V T++    RV FDR  LG   + D + + + P + MP A
Sbjct: 456 GLFTGQIDAVDTLNATY-RVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 503


>gi|410985705|ref|XP_003999157.1| PREDICTED: protein lin-9 homolog [Felis catus]
          Length = 561

 Score = 80.1 bits (196), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 127 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 186

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 187 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 246

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   V D + + + P + MP A
Sbjct: 247 ARLRGVHDGLFTGQIDAVDTFNATYRVTFDRAGLGTHTVPDYEVLSNEPHETMPIA 302


>gi|71895601|ref|NP_001026213.1| protein lin-9 homolog [Gallus gallus]
 gi|326915050|ref|XP_003203834.1| PREDICTED: protein lin-9 homolog [Meleagris gallopavo]
 gi|53127404|emb|CAG31085.1| hypothetical protein RCJMB04_2c19 [Gallus gallus]
          Length = 450

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 75/164 (45%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 27  KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSA 86

Query: 704 FLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHDG--- 733
           F  +ER  LKQ R+       R +A                     +  + R +HDG   
Sbjct: 87  FFEEERSALKQKRQKIRLLQQRKVADISQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFT 146

Query: 734 -SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
             +  +D  +   RV FDR  LG + + D + + + P + MP A
Sbjct: 147 GQIEAVDTLNATYRVTFDRAGLGTQTIPDYEVLSNEPHETMPIA 190


>gi|426239551|ref|XP_004013684.1| PREDICTED: protein lin-9 homolog isoform 2 [Ovis aries]
          Length = 507

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 43/208 (20%)

Query: 602 SSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPW 661
           S+ EMKF+  +  + P+K + SQ+     +  +L   L      +WC +EWFYS ID P 
Sbjct: 49  SAVEMKFT--ATMSTPDKKA-SQK-----IGFRLRNLLKLPKAHKWCIYEWFYSNIDKPL 100

Query: 662 F-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE-- 717
           F  + +F   L         R LTRVEWG IR  +GKPRR S  F  +ER  LKQ R+  
Sbjct: 101 FEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKI 160

Query: 718 ----SRVIA---------------------IHPKTRELHDG----SVLTID--HDKCRVQ 746
                R +A                     +  + R +HDG     +  +D  +   RV 
Sbjct: 161 RLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYRVT 220

Query: 747 FDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           FDR  LG   + D + + + P + MP A
Sbjct: 221 FDRAGLGTHTIPDYEVLSNEPHETMPIA 248


>gi|394582065|ref|NP_001257338.1| protein lin-9 homolog isoform 2 [Homo sapiens]
 gi|397487816|ref|XP_003814975.1| PREDICTED: protein lin-9 homolog isoform 3 [Pan paniscus]
          Length = 523

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 43/208 (20%)

Query: 602 SSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPW 661
           S+ EMKF+  +  + P+K + SQ+     +  +L   L      +WC +EWFYS ID P 
Sbjct: 65  SAVEMKFT--ATMSTPDKKA-SQK-----IGFRLRNLLKLPKAHKWCIYEWFYSNIDKPL 116

Query: 662 F-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE-- 717
           F  + +F   L         R LTRVEWG IR  +GKPRR S  F  +ER  LKQ R+  
Sbjct: 117 FEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKI 176

Query: 718 ----SRVIA---------------------IHPKTRELHDG----SVLTID--HDKCRVQ 746
                R +A                     +  + R +HDG     +  +D  +   RV 
Sbjct: 177 RLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYRVT 236

Query: 747 FDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           FDR  LG   + D + + + P + MP A
Sbjct: 237 FDRTGLGTHTIPDYEVLSNEPHETMPIA 264


>gi|33338226|gb|AAQ13710.1|AF190323_1 type I interferon receptor beta chain-associated protein splice
           variant [Homo sapiens]
 gi|34532584|dbj|BAC86475.1| unnamed protein product [Homo sapiens]
 gi|119590186|gb|EAW69780.1| lin-9 homolog (C. elegans), isoform CRA_a [Homo sapiens]
          Length = 507

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 43/208 (20%)

Query: 602 SSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPW 661
           S+ EMKF+  +  + P+K + SQ+     +  +L   L      +WC +EWFYS ID P 
Sbjct: 49  SAVEMKFT--ATMSTPDKKA-SQK-----IGFRLRNLLKLPKAHKWCIYEWFYSNIDKPL 100

Query: 662 F-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE-- 717
           F  + +F   L         R LTRVEWG IR  +GKPRR S  F  +ER  LKQ R+  
Sbjct: 101 FEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKI 160

Query: 718 ----SRVIA---------------------IHPKTRELHDG----SVLTID--HDKCRVQ 746
                R +A                     +  + R +HDG     +  +D  +   RV 
Sbjct: 161 RLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYRVT 220

Query: 747 FDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           FDR  LG   + D + + + P + MP A
Sbjct: 221 FDRTGLGTHTIPDYEVLSNEPHETMPIA 248


>gi|345329503|ref|XP_001512935.2| PREDICTED: protein lin-9 homolog [Ornithorhynchus anatinus]
          Length = 558

 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 124 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 183

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 184 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 243

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   V D + + + P + MP A
Sbjct: 244 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTVPDYEVLSNEPHETMPIA 299


>gi|395531480|ref|XP_003767806.1| PREDICTED: protein lin-9 homolog [Sarcophilus harrisii]
          Length = 550

 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 41/236 (17%)

Query: 580 ASPASSPTKHQSRRKM---DLKRKLSSKEMKFSEN-SLKTQPNKNSLSQEDRLLSMK--E 633
           AS    P ++  R ++   D  R+L+++  K ++  ++  Q    ++S  D+  S K   
Sbjct: 56  ASSVEMPFRNSKRSRLFCEDDDRQLNTRSPKRNQRVAMVPQKFTATMSTPDKKASQKIGF 115

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 116 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 175

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 176 RLMGKPRRCSSAFFEEERAALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 235

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   V D + + + P + MP A
Sbjct: 236 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTVPDYEVLSNEPHETMPIA 291


>gi|392352894|ref|XP_001067807.2| PREDICTED: protein lin-9 homolog [Rattus norvegicus]
          Length = 542

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 108 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 167

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 168 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 227

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 228 ARLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 283


>gi|402857039|ref|XP_003893081.1| PREDICTED: protein lin-9 homolog isoform 2 [Papio anubis]
          Length = 628

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 181 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 240

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 241 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 300

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 301 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 356


>gi|301623751|ref|XP_002941177.1| PREDICTED: protein lin-9 homolog [Xenopus (Silurana) tropicalis]
          Length = 566

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 72/164 (43%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 144 KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSAA 203

Query: 704 FLHDEREKLKQYRE-------------------------SRVIA--IHPKTRELHDG--- 733
           F  +ER  L+Q R+                         S VI   +  + R +HDG   
Sbjct: 204 FFEEERSALEQKRQKIRLLQQRKVADVSQFKDLPDEIPLSLVIGTKVTARLRGVHDGLFT 263

Query: 734 ---SVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
                +   +   RV FDR  LG   + D + + + P + MP A
Sbjct: 264 GQIDAVDTQNSTYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 307


>gi|392332930|ref|XP_003752740.1| PREDICTED: protein lin-9 homolog [Rattus norvegicus]
          Length = 552

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 118 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 177

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 178 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 237

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 238 ARLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 293


>gi|402857037|ref|XP_003893080.1| PREDICTED: protein lin-9 homolog isoform 1 [Papio anubis]
          Length = 723

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 276 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 335

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 336 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 395

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 396 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 451


>gi|351703429|gb|EHB06348.1| Lin-9-like protein, partial [Heterocephalus glaber]
          Length = 531

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 97  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 156

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 157 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 216

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 217 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 272


>gi|109018058|ref|XP_001091104.1| PREDICTED: protein lin-9 homolog [Macaca mulatta]
          Length = 615

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 181 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 240

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 241 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 300

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 301 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 356


>gi|395862826|ref|XP_003803626.1| PREDICTED: protein lin-9 homolog [Otolemur garnettii]
          Length = 610

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS+ID P F  + +F   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 188 KWCLYEWFYSSIDKPLFEGDNDFCLCLKQSFPSLKTRMLTRVEWGKIRRLMGKPRRCSSA 247

Query: 704 FLHDEREKLKQYRE------------------------------SRVIA-IHPKTRELHD 732
           +  +ER  L+Q R+                              ++V A +H     L  
Sbjct: 248 YFEEERSALQQKRQQIRLLQQRKVADVSQFEDLPDEIPLPLAIGTKVTARLHHAYGGLFT 307

Query: 733 GSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           G ++ +D  +    V FDR ELG   + D + + + P + MP A
Sbjct: 308 GQIVAVDTLNATYTVTFDRTELGTHTIPDYEVLSNEPHETMPIA 351


>gi|397487814|ref|XP_003814974.1| PREDICTED: protein lin-9 homolog isoform 2 [Pan paniscus]
          Length = 615

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 181 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 240

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 241 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 300

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 301 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 356


>gi|119590188|gb|EAW69782.1| lin-9 homolog (C. elegans), isoform CRA_c [Homo sapiens]
          Length = 655

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 221 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 280

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 281 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 340

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 341 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 396


>gi|426333977|ref|XP_004028542.1| PREDICTED: protein lin-9 homolog [Gorilla gorilla gorilla]
          Length = 615

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 181 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 240

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 241 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 300

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 301 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 356


>gi|449495941|ref|XP_002194782.2| PREDICTED: protein lin-9 homolog isoform 1 [Taeniopygia guttata]
          Length = 491

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNH-VGLGHIPRLTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L          +LTRVEWG IR  +GKPRR S  
Sbjct: 68  KWCIYEWFYSNIDKPLFEGDNDFCICLKESFPTLKTRKLTRVEWGKIRRLMGKPRRCSSA 127

Query: 704 FLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHDG--- 733
           F  +ER  LKQ R+       R +A                     +  + R +HDG   
Sbjct: 128 FFEEERSALKQKRQKIRLLQQRKVADLSQFKDLPEEIPLPLVIGTKVTARLRGVHDGLFT 187

Query: 734 -SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
             +  +D  +   RV FDR  LG   V D + + + P + MP A
Sbjct: 188 GQIDAVDTLNATYRVTFDRAGLGTHTVPDYEVLSNEPHETMPIA 231


>gi|348553192|ref|XP_003462411.1| PREDICTED: protein lin-9 homolog [Cavia porcellus]
          Length = 557

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 124 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 183

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 184 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 243

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 244 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 299


>gi|149040871|gb|EDL94828.1| rCG20295 [Rattus norvegicus]
          Length = 490

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 176 ARLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 231


>gi|31873868|emb|CAD97871.1| hypothetical protein [Homo sapiens]
          Length = 550

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 116 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 175

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 176 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 235

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 236 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 291


>gi|426239549|ref|XP_004013683.1| PREDICTED: protein lin-9 homolog isoform 1 [Ovis aries]
          Length = 542

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 108 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 167

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 168 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 227

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 228 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 283


>gi|440896845|gb|ELR48663.1| Protein lin-9-like protein, partial [Bos grunniens mutus]
          Length = 551

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 117 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 176

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 177 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 236

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 237 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 292


>gi|301782651|ref|XP_002926748.1| PREDICTED: protein lin-9 homolog [Ailuropoda melanoleuca]
          Length = 547

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 113 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 172

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 173 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 232

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 233 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 288


>gi|449495945|ref|XP_004175153.1| PREDICTED: protein lin-9 homolog isoform 2 [Taeniopygia guttata]
          Length = 456

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNH-VGLGHIPRLTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L          +LTRVEWG IR  +GKPRR S  
Sbjct: 33  KWCIYEWFYSNIDKPLFEGDNDFCICLKESFPTLKTRKLTRVEWGKIRRLMGKPRRCSSA 92

Query: 704 FLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHDG--- 733
           F  +ER  LKQ R+       R +A                     +  + R +HDG   
Sbjct: 93  FFEEERSALKQKRQKIRLLQQRKVADLSQFKDLPEEIPLPLVIGTKVTARLRGVHDGLFT 152

Query: 734 -SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
             +  +D  +   RV FDR  LG   V D + + + P + MP A
Sbjct: 153 GQIDAVDTLNATYRVTFDRAGLGTHTVPDYEVLSNEPHETMPIA 196


>gi|194227292|ref|XP_001491375.2| PREDICTED: protein lin-9 homolog [Equus caballus]
          Length = 709

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 275 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 334

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 335 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 394

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 395 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 450


>gi|397487812|ref|XP_003814973.1| PREDICTED: protein lin-9 homolog isoform 1 [Pan paniscus]
 gi|74708186|sp|Q5TKA1.1|LIN9_HUMAN RecName: Full=Protein lin-9 homolog; Short=HuLin-9; Short=hLin-9;
           AltName: Full=Beta subunit-associated regulator of
           apoptosis; AltName: Full=TUDOR gene similar protein;
           AltName: Full=Type I interferon receptor beta
           chain-associated protein; AltName: Full=pRB-associated
           protein
 gi|33338228|gb|AAQ13711.1|AF190324_1 type I interferon receptor beta chain-associated protein [Homo
           sapiens]
          Length = 542

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 108 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 167

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 168 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 227

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 228 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 283


>gi|75077112|sp|Q4R8N2.1|LIN9_MACFA RecName: Full=Protein lin-9 homolog
 gi|67968119|dbj|BAE00540.1| unnamed protein product [Macaca fascicularis]
          Length = 542

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 108 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 167

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 168 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 227

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 228 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 283


>gi|359073889|ref|XP_003587106.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog [Bos taurus]
          Length = 559

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 124 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 183

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 184 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 243

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 244 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 299


>gi|32996737|ref|NP_775106.2| protein lin-9 homolog isoform 1 [Homo sapiens]
 gi|54673504|gb|AAH45625.1| Lin-9 homolog (C. elegans) [Homo sapiens]
 gi|410331717|gb|JAA34805.1| lin-9 homolog [Pan troglodytes]
          Length = 558

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 124 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 183

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 184 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 243

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 244 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 299


>gi|34783601|gb|AAH43444.1| LIN9 protein, partial [Homo sapiens]
          Length = 543

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 109 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 168

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 169 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 228

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 229 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 284


>gi|431906516|gb|ELK10639.1| Lin-9 like protein, partial [Pteropus alecto]
          Length = 531

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 97  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 156

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 157 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADLTQFKDLPDEIPLPLVIGTKVT 216

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 217 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 272


>gi|157057192|ref|NP_001096652.1| protein lin-9 homolog isoform 1 [Mus musculus]
 gi|115311780|sp|Q8C735.2|LIN9_MOUSE RecName: Full=Protein lin-9 homolog; Short=mLin-9; AltName:
           Full=TUDOR gene similar 1 protein; AltName: Full=Type I
           interferon receptor beta chain-associated protein
          Length = 542

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 35/174 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 108 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 167

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 168 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 227

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP
Sbjct: 228 ARLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMP 281


>gi|390477352|ref|XP_003735281.1| PREDICTED: protein lin-9 homolog isoform 2 [Callithrix jacchus]
          Length = 542

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 108 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 167

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 168 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 227

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 228 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 283


>gi|441612518|ref|XP_004088085.1| PREDICTED: protein lin-9 homolog [Nomascus leucogenys]
          Length = 523

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 92/205 (44%), Gaps = 43/205 (20%)

Query: 605 EMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-S 663
           EMKF+  +  + P+K + SQ+     +  +L   L      +WC +EWFYS ID P F  
Sbjct: 68  EMKFT--ATMSTPDKKA-SQK-----IGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEG 119

Query: 664 NREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE----- 717
           + +F   L         R LTRVEWG IR  +GKPRR S  F  +ER  LKQ R+     
Sbjct: 120 DNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLL 179

Query: 718 -SRVIA---------------------IHPKTRELHDG----SVLTID--HDKCRVQFDR 749
             R +A                     +  + R +HDG     +  +D  +   RV FDR
Sbjct: 180 QQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYRVTFDR 239

Query: 750 PELGVEFVMDIDSMPSNPLDNMPEA 774
             LG   + D + + + P + MP A
Sbjct: 240 TGLGTHTIPDYEVLSNEPHETMPIA 264


>gi|55140657|gb|AAV41873.1| Lin-9 [Homo sapiens]
          Length = 542

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 108 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 167

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 168 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 227

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 228 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 283


>gi|332252019|ref|XP_003275151.1| PREDICTED: protein lin-9 homolog isoform 1 [Nomascus leucogenys]
          Length = 558

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 124 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 183

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 184 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 243

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 244 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 299


>gi|395862942|ref|XP_003803675.1| PREDICTED: protein lin-9 homolog [Otolemur garnettii]
          Length = 508

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS+ID P F  + +F   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 86  KWCLYEWFYSSIDKPLFEGDNDFCLCLKQSFPSLKTRMLTRVEWGKIRRLMGKPRRCSSA 145

Query: 704 FLHDEREKLKQYRE------------------------------SRVIA-IHPKTRELHD 732
           +  +ER  L+Q R+                              ++V A +H     L  
Sbjct: 146 YFEEERSALQQKRQQIRLLQQRKVADVSQFEDLPDEIPLPLAIGTKVTARLHHAYGGLFT 205

Query: 733 GSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           G ++ +D  +    V FDR ELG   + D + + + P + MP A
Sbjct: 206 GQIVAVDTLNATYTVTFDRTELGTHTIPDYEVLSNEPHETMPIA 249


>gi|296230272|ref|XP_002760626.1| PREDICTED: protein lin-9 homolog isoform 1 [Callithrix jacchus]
          Length = 523

 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 92/205 (44%), Gaps = 43/205 (20%)

Query: 605 EMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-S 663
           EMKF+  +  + P+K + SQ+     +  +L   L      +WC +EWFYS ID P F  
Sbjct: 68  EMKFT--ATMSTPDKKA-SQK-----IGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEG 119

Query: 664 NREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE----- 717
           + +F   L         R LTRVEWG IR  +GKPRR S  F  +ER  LKQ R+     
Sbjct: 120 DNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLL 179

Query: 718 -SRVIA---------------------IHPKTRELHDG----SVLTID--HDKCRVQFDR 749
             R +A                     +  + R +HDG     +  +D  +   RV FDR
Sbjct: 180 QQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYRVTFDR 239

Query: 750 PELGVEFVMDIDSMPSNPLDNMPEA 774
             LG   + D + + + P + MP A
Sbjct: 240 TGLGTHTIPDYEVLSNEPHETMPIA 264


>gi|355699409|gb|AES01118.1| lin-9-like protein [Mustela putorius furo]
          Length = 530

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 97  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 156

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 157 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 216

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 217 ARLRGVHDGLFTGQIDAVDTFNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 272


>gi|355745872|gb|EHH50497.1| hypothetical protein EGM_01340, partial [Macaca fascicularis]
          Length = 555

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 121 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 180

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 181 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 240

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 241 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 296


>gi|73961471|ref|XP_854699.1| PREDICTED: protein lin-9 homolog [Canis lupus familiaris]
          Length = 569

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 147 KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSA 206

Query: 704 FLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHDG--- 733
           F  +ER  LKQ R+       R +A                     +  + R +HDG   
Sbjct: 207 FFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFT 266

Query: 734 -SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
             +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 267 GQIDAVDTFNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 310


>gi|354490247|ref|XP_003507270.1| PREDICTED: protein lin-9 homolog [Cricetulus griseus]
          Length = 558

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 124 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 183

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 184 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 243

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 244 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 299


>gi|355558713|gb|EHH15493.1| hypothetical protein EGK_01594, partial [Macaca mulatta]
          Length = 567

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 133 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 192

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 193 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 252

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 253 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 308


>gi|148681204|gb|EDL13151.1| lin-9 homolog (C. elegans) [Mus musculus]
          Length = 490

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 35/174 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP
Sbjct: 176 ARLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMP 229


>gi|344255076|gb|EGW11180.1| Lin-9-like [Cricetulus griseus]
          Length = 490

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 176 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 231


>gi|27369419|gb|AAN87841.1| TGS2 [Homo sapiens]
          Length = 546

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 46/211 (21%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEW 687
           +L   L      +WC +EWFYS ID P F  + +F   L        P     +LTRVEW
Sbjct: 258 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKE----SFPNLKTRKLTRVEW 313

Query: 688 GVIRSSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA------------------- 722
           G IR  +GKPRR S  F  +ER  LKQ R+       R +A                   
Sbjct: 314 GKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIG 373

Query: 723 --IHPKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP-E 773
             +  + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP  
Sbjct: 374 TKVTARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 433

Query: 774 ALRRQISADKFSAISKELQVNGHPNFGSPML 804
           AL ++    +F      L     P   SP++
Sbjct: 434 ALGQKQRPSRFFMTPPRLHYT--PPLQSPII 462


>gi|281354064|gb|EFB29648.1| hypothetical protein PANDA_016434 [Ailuropoda melanoleuca]
          Length = 523

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 89  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 148

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 149 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 208

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 209 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 264


>gi|403277378|ref|XP_003930340.1| PREDICTED: protein lin-9 homolog [Saimiri boliviensis boliviensis]
          Length = 490

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 176 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 231


>gi|40806970|gb|AAH65302.1| LIN9 protein, partial [Homo sapiens]
          Length = 568

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 134 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 193

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 194 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 253

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 254 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 309


>gi|33338230|gb|AAQ13712.1| type I interferon receptor beta chain-associated protein [Mus
           musculus]
          Length = 485

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 35/174 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP
Sbjct: 176 ARLRGIHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMP 229


>gi|449276746|gb|EMC85167.1| Lin-9 like protein [Columba livia]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNH-VGLGHIPRLTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L          +LTRVEWG IR  +GKPRR S  
Sbjct: 27  KWCIYEWFYSNIDKPLFEGDNDFCICLKESFPTLKTRKLTRVEWGKIRRLMGKPRRCSSA 86

Query: 704 FLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHDG--- 733
           F  +ER  LKQ R+       R +A                     +  + R +HDG   
Sbjct: 87  FFEEERSALKQKRQKIRLLQQRKVADISQFKDLPEEIPLPLVIGTKVTARLRGVHDGLFT 146

Query: 734 -SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
             +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 147 GQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 190


>gi|394582075|ref|NP_001257339.1| protein lin-9 homolog isoform 3 [Homo sapiens]
 gi|410034526|ref|XP_525073.3| PREDICTED: protein lin-9 homolog [Pan troglodytes]
 gi|441612515|ref|XP_004088084.1| PREDICTED: protein lin-9 homolog [Nomascus leucogenys]
          Length = 490

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 176 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 231


>gi|395836244|ref|XP_003791069.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog [Otolemur
           garnettii]
          Length = 696

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 240 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 299

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 300 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 359

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 360 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 415


>gi|320170890|gb|EFW47789.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1018

 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 43/172 (25%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF--SNREFVEYLNHVGLGHIPRLTRVEWGVIR 691
           ++   L    VR+   +EWFYS++D+     +  EF + L   GLGH+  +TR+EW   R
Sbjct: 536 RIRPALRQATVRQQAIYEWFYSSLDHVLLRPAKNEFEQSLERFGLGHVTHMTRIEWAAFR 595

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRESRVIAIH-------PKTRE--------------- 729
             +GKPRR S  F+  ER  L++ R +++ AI        P + E               
Sbjct: 596 RKIGKPRRFSAAFIEAERNMLERQR-TKIRAIQQIHVAETPVSSEPLPEVPIPVMIPELI 654

Query: 730 ----------------LHDGSVLTIDHDK-C-RVQFDRPELGVEFVMDIDSM 763
                           L +G+VL ++  K C +++FD P +   ++ D+D M
Sbjct: 655 RVNERVTVRIAEYPDRLFNGTVLAVNPAKFCYQIKFDNPGIEPRYIPDVDVM 706



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 37/54 (68%)

Query: 38 DKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSL 91
          ++LG +WS  EL+ F+E +R + ++++++A+Q+  R+   V ALY  N++ LS 
Sbjct: 2  NQLGSRWSNDELETFFEQFRKHHQNFERIASQLPGRTVAQVSALYRQNKSVLSF 55


>gi|47224334|emb|CAG09180.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 487

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 71/162 (43%), Gaps = 35/162 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + EF   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 122 KWCIYEWFYSNIDRPLFEGDNEFCLCLKESFPNLKTRKLTRVEWGTIRRLMGKPRRCSSA 181

Query: 704 FLHDEREKLKQYRES-RVIA--------------------------IHPKTRELHDG--- 733
           F  +ER  L+Q R+  R++                           +  + R  HDG   
Sbjct: 182 FFVEERTALRQKRQKMRLLQQGKISDVSNCKDLPDEIPLRLNIGTKVTARLRGAHDGLFT 241

Query: 734 -SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
             +  +D      RV FDR  LG   V D + + + P + MP
Sbjct: 242 GQIDAVDTTAATYRVTFDRNGLGTHTVPDYEVLSNEPNETMP 283


>gi|242000410|ref|XP_002434848.1| lin-9, putative [Ixodes scapularis]
 gi|215498178|gb|EEC07672.1| lin-9, putative [Ixodes scapularis]
          Length = 459

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 37/182 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNH-VGLGHIPRLTRVEWGVIR 691
           +L   L      RW  +EWFYS ID P F  + EF  YL     L    +LTRV+W  IR
Sbjct: 15  RLRNLLKLPKAHRWVCYEWFYSNIDQPLFQGDNEFCAYLKQSFPLLKTRKLTRVQWCKIR 74

Query: 692 SSLGKPRRLSKRF-------LHDEREKLKQYRESRVIA--------------------IH 724
             +GKPRR S  F       LH+ R  ++Q ++ +V+                     + 
Sbjct: 75  RIMGKPRRCSPSFFEEEIRSLHERRNNIRQVQQRKVLTTDNFSNLPADIPLPLVIGTKVT 134

Query: 725 PKTRE----LHDGSVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMPEA--LR 776
            + R+    L +GS+  +D      R +FDR  LG   V D + +  +P + MP+A  L+
Sbjct: 135 ARLRKPQDGLFEGSIDAVDTQTATYRTKFDRSGLGTHSVPDYEVLSIDPPETMPKASFLQ 194

Query: 777 RQ 778
           RQ
Sbjct: 195 RQ 196


>gi|348687289|gb|EGZ27103.1| hypothetical protein PHYSODRAFT_320947 [Phytophthora sojae]
          Length = 641

 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%)

Query: 40  LGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVV 99
           LGP+WS  EL+ FY   + +G+ W+K+  ++  RS  MV AL+ M+R YLSLPE  ASV 
Sbjct: 7   LGPRWSLKELRTFYILLKAHGRQWEKLEERLPLRSGAMVRALFEMHRGYLSLPE--ASVE 64

Query: 100 GLIAMMTDHYNVMEGSDSERES 121
           G  A+M DHY + +    +R+S
Sbjct: 65  GFCAIMMDHYEMQDELQQQRDS 86



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 44/65 (67%)

Query: 652 WFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREK 711
           WFYS +D  +F + EF+E L+ +GLG I    R  W  +R+S+G+PRRLS+ F   E+EK
Sbjct: 207 WFYSYVDVDFFRHNEFIECLSGMGLGKITTAARPIWSSVRASMGRPRRLSRLFFAQEKEK 266

Query: 712 LKQYR 716
           L+ YR
Sbjct: 267 LESYR 271


>gi|432945299|ref|XP_004083529.1| PREDICTED: protein lin-9 homolog [Oryzias latipes]
          Length = 547

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 69/162 (42%), Gaps = 35/162 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + EF   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 121 KWCIYEWFYSNIDRPLFEGDNEFCLCLKESFPNLKTRKLTRVEWGTIRRLMGKPRRCSSA 180

Query: 704 FLHDEREKLKQYRESRVIAIHPKTREL---------------------------HDG--- 733
           F  +ER  L+Q R+   +    K  +L                           HDG   
Sbjct: 181 FFAEERTALRQKRQKMRLLQQRKLSDLSNCKDLPEEIPLPLIIGTKVTARLRGNHDGLFT 240

Query: 734 -SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
             +  +D      RV FDR  LG   V D + + + P + MP
Sbjct: 241 GQIDAVDTSAATYRVTFDRTGLGTHTVPDYEVLSNEPNETMP 282


>gi|27369417|gb|AAN87840.1| TGS1 [Homo sapiens]
          Length = 344

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 176 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 231


>gi|410916607|ref|XP_003971778.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog [Takifugu
           rubripes]
          Length = 596

 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 71/162 (43%), Gaps = 35/162 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + EF   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 170 KWCIYEWFYSNIDRPLFEGDNEFCLCLKESFPNLKTRKLTRVEWGTIRRLMGKPRRCSSA 229

Query: 704 FLHDEREKLKQYRES-RVI--------------------------AIHPKTRELHDG--- 733
           F  +ER  L+Q R+  R++                           +  + R  HDG   
Sbjct: 230 FFVEERTALRQKRQKMRLLQQGKISDVSNCKDLPDEIPLRLNIGTKVTARLRGAHDGLFT 289

Query: 734 -SVLTIDHDKC--RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
             +  +D      RV FDR  LG   V D + + + P + MP
Sbjct: 290 GQIDAVDTTAATYRVTFDRNGLGTHTVPDYEVLSNEPNETMP 331


>gi|327262647|ref|XP_003216135.1| PREDICTED: protein lin-9 homolog [Anolis carolinensis]
          Length = 534

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 73/164 (44%), Gaps = 35/164 (21%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 111 KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSA 170

Query: 704 FLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHDG--- 733
           F  +ER  LKQ R+       R +A                     +  + R  HDG   
Sbjct: 171 FFEEERSALKQKRQKIRLLQQRKVADISQFKDLPEEIPLPLVIGTKVTARLRGAHDGLFT 230

Query: 734 -SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
             +  +D  +   RV F+R  LG   + D + + + P + MP A
Sbjct: 231 GQIDAVDTLNATYRVTFERTGLGTHTIPDYEVLSNEPNETMPIA 274


>gi|157057190|ref|NP_780395.2| protein lin-9 homolog isoform 2 [Mus musculus]
          Length = 502

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 74/163 (45%), Gaps = 37/163 (22%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR S  
Sbjct: 120 KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSA 179

Query: 704 FLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHDG--- 733
           F  +ER  LKQ R+       R +A                     +  + R +HDG   
Sbjct: 180 FFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGIHDGLFT 239

Query: 734 ----SVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
               +V T++    RV FDR  LG   + D + + + P + MP
Sbjct: 240 GQIDAVDTLNATY-RVTFDRTGLGTHTIPDYEVLSNEPHETMP 281


>gi|26342817|dbj|BAC35065.1| unnamed protein product [Mus musculus]
          Length = 502

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 75/167 (44%), Gaps = 45/167 (26%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPRL-----TRVEWGVIRSSLGKPRR 699
           +WC +EWFYS ID P F  + +F   L        P+L     TRVEWG IR  +GKPRR
Sbjct: 120 KWCIYEWFYSNIDKPLFEGDNDFCVCLKE----SFPKLKTRKLTRVEWGKIRRLMGKPRR 175

Query: 700 LSKRFLHDEREKLKQYRE------SRVIA---------------------IHPKTRELHD 732
            S  F  +ER  LKQ R+       R +A                     +  + R +HD
Sbjct: 176 CSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGIHD 235

Query: 733 G-------SVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
           G       +V T++    RV FDR  LG   + D + + + P + MP
Sbjct: 236 GLFTGQIDAVDTLNATY-RVTFDRTGLGTHTIPDYEVLSNEPHETMP 281


>gi|119590187|gb|EAW69781.1| lin-9 homolog (C. elegans), isoform CRA_b [Homo sapiens]
          Length = 294

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 56  RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 115

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S  F  +ER  LKQ R+       R +A                     + 
Sbjct: 116 RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 175

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 176 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIA 231


>gi|358416020|ref|XP_003583273.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog [Bos taurus]
          Length = 558

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 76/176 (43%), Gaps = 35/176 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 124 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 183

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------SRVIA---------------------IH 724
             +GKPRR S     +ER  LKQ R+       R +A                     + 
Sbjct: 184 RLMGKPRRCSSAXFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT 243

Query: 725 PKTRELHDG----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
            + R +HDG     +  +D  +   RV FDR  LG   + D + + + P + MP A
Sbjct: 244 ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIA 299


>gi|301123701|ref|XP_002909577.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100339|gb|EEY58391.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 600

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 43/67 (64%)

Query: 650 FEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDER 709
           F WFYS +D  +F + EF+E L  +GLG I    R  W  +R+S+G+PRRLS  F   E+
Sbjct: 195 FHWFYSYMDVDFFRHNEFIECLGGMGLGKITAAARPIWSSVRASMGRPRRLSPLFFSQEK 254

Query: 710 EKLKQYR 716
           EKL+ YR
Sbjct: 255 EKLESYR 261



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 3/88 (3%)

Query: 40  LGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVV 99
           LGP+WS  EL+ FY   + +G+ W K+   +  RS  MV AL+ M+R YLSLPE +A   
Sbjct: 8   LGPRWSPKELRTFYILLKAHGQQWDKLVECLPLRSEAMVRALFEMHRGYLSLPEASAE-- 65

Query: 100 GLIAMMTDHYNVMEGSDSERESNDASEM 127
           G  A+M D Y  M+    +R++N ++ +
Sbjct: 66  GFCAIMMDRYE-MQDEMEQRKTNASASL 92


>gi|443733682|gb|ELU17953.1| hypothetical protein CAPTEDRAFT_99454 [Capitella teleta]
          Length = 443

 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 112/268 (41%), Gaps = 60/268 (22%)

Query: 646 RWCTFEWFYSAIDYPWFSNR-EFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKR 703
           +W  +EWFYS ID   F    +F   L         R LTRV+W  IR  +GKPRR S  
Sbjct: 29  KWVCYEWFYSNIDRSLFEGENDFCICLKETFPQLKARKLTRVQWCKIRRLMGKPRRCSPA 88

Query: 704 F-------LHDEREKLKQY--RESRVIA-IHPKTRE---------------------LHD 732
           F       LH +R+K++Q   R++ VI+ IH    E                     L  
Sbjct: 89  FFNEERSALHRKRDKIRQLQQRKTNVISEIHALPDEIPMPLVIGTRVTARLRSPQDGLFT 148

Query: 733 GSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEAL---------RRQISA 781
           G V  +D  ++  R+ FDRP LG   V DI+ + + P + MP ++         R   + 
Sbjct: 149 GVVDAVDFFNNTYRINFDRPGLGSHSVPDIEVLSNEPQETMPLSVFQNQPRPPQRGMFTP 208

Query: 782 DKFSAISKELQVNGHPNFG-SPMLFASDGHLEKAPILPNTLQ--------------KQAK 826
            +F+  S  L  +  P  G SP+  + DG     P+    +               KQ K
Sbjct: 209 PRFNPSSPGLLWDHDPLLGSSPVKPSVDGTCGGFPVKLLAMMTRVSRILTVKKDKIKQLK 268

Query: 827 GDMNHALPQAKSLATDIVSAQQAAYGQL 854
            DMN A  + KS  TDI  A Q  Y  L
Sbjct: 269 -DMNTAAEKMKSHETDIDVAFQQRYASL 295


>gi|195170105|ref|XP_002025854.1| GL18218 [Drosophila persimilis]
 gi|194110707|gb|EDW32750.1| GL18218 [Drosophila persimilis]
          Length = 958

 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 75/180 (41%), Gaps = 44/180 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTRVEWG 688
           +L   L      +W   EWFYS ID P F +R+  E+LNHV      LG   +L R EW 
Sbjct: 310 RLRNLLKLPKAHKWAIAEWFYSYIDRPLFDSRD--EFLNHVNELDPRLG-TRQLNRHEWS 366

Query: 689 VIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTIDHDKC----- 743
            IR  +GKPRR S  F ++ER++L + R+        K  EL D  +L+   DK      
Sbjct: 367 TIRRQMGKPRRCSANFFNEERKELDRKRKLMRTLQSRKPGELKDSVLLSDMPDKIPMPLP 426

Query: 744 -------------------------------RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
                                          RV F+RP LG   + D + +  N  + +P
Sbjct: 427 LGTKVTARLRTPQDGIFSGTVAAYDSLNATYRVTFERPGLGTHAIPDFEIVSENFHEMLP 486


>gi|312075829|ref|XP_003140591.1| DIRP family protein [Loa loa]
          Length = 535

 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 36/211 (17%)

Query: 538 RTSQNSAQSKQWKP----GRVLEGSSVNDQNRASIDLVAPTGQAPVASPAS-SPTKHQSR 592
           R S + ++SK+  P    G+VL+  S  D N      V+     PV +  S SP K  S 
Sbjct: 34  RLSTSKSKSKRLSPLKRGGKVLKAESDTDSN------VSNGTNNPVLTKLSESPKKTISN 87

Query: 593 RKMDLKRKLSSKEMKFSENSLKT---QPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
                    + KE+     +L+T   QP++ S +  + L  +K      L     RRW  
Sbjct: 88  G--------AQKEIARENAALRTARPQPSEISPTMRENLRHLK----NVLKLPKARRWVY 135

Query: 650 FEWFYSAIDYPWFS-NREFVEYLNHVGLG-HIPRLTRVEWGVIRSSLGKPRRLSKRFLHD 707
            E+FYS +D   FS + EFV+ L+ +       +L R EW  IR  +GKPRR S+ FL++
Sbjct: 136 CEFFYSGVDQQLFSGDNEFVQLLHEMFPNLRTLKLCRPEWRAIRKMIGKPRRCSEAFLNE 195

Query: 708 EREKLKQYRESRVIAIHPKTRELHDGSVLTI 738
           ERE L+  R         + R+++DGS++ I
Sbjct: 196 ERESLETKRA--------RIRQIYDGSLMNI 218


>gi|393910555|gb|EFO23482.2| DIRP family protein [Loa loa]
          Length = 541

 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 36/211 (17%)

Query: 538 RTSQNSAQSKQWKP----GRVLEGSSVNDQNRASIDLVAPTGQAPVASPAS-SPTKHQSR 592
           R S + ++SK+  P    G+VL+  S  D N      V+     PV +  S SP K  S 
Sbjct: 34  RLSTSKSKSKRLSPLKRGGKVLKAESDTDSN------VSNGTNNPVLTKLSESPKKTISN 87

Query: 593 RKMDLKRKLSSKEMKFSENSLKT---QPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
                    + KE+     +L+T   QP++ S +  + L  +K      L     RRW  
Sbjct: 88  G--------AQKEIARENAALRTARPQPSEISPTMRENLRHLK----NVLKLPKARRWVY 135

Query: 650 FEWFYSAIDYPWFS-NREFVEYLNHVGLG-HIPRLTRVEWGVIRSSLGKPRRLSKRFLHD 707
            E+FYS +D   FS + EFV+ L+ +       +L R EW  IR  +GKPRR S+ FL++
Sbjct: 136 CEFFYSGVDQQLFSGDNEFVQLLHEMFPNLRTLKLCRPEWRAIRKMIGKPRRCSEAFLNE 195

Query: 708 EREKLKQYRESRVIAIHPKTRELHDGSVLTI 738
           ERE L+  R         + R+++DGS++ I
Sbjct: 196 ERESLETKRA--------RIRQIYDGSLMNI 218


>gi|198467824|ref|XP_002133863.1| GA27784 [Drosophila pseudoobscura pseudoobscura]
 gi|198146124|gb|EDY72490.1| GA27784 [Drosophila pseudoobscura pseudoobscura]
          Length = 958

 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 73/180 (40%), Gaps = 44/180 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTRVEWG 688
           +L   L      +W   EWFYS ID P F +R+  E+LNHV      LG   +L R EW 
Sbjct: 310 RLRNLLKLPKAHKWAIAEWFYSYIDRPLFDSRD--EFLNHVNELDPRLG-TRQLNRHEWS 366

Query: 689 VIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTIDHDKC----- 743
            IR  +GKPRR S  F ++ER++L   R+        K  EL D  +L    DK      
Sbjct: 367 TIRRQMGKPRRCSPNFFNEERKELDSKRKLMRTLQSRKPGELKDSVLLADMPDKIPMPLP 426

Query: 744 -------------------------------RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
                                          RV F+RP LG   + D + +  N  + +P
Sbjct: 427 LGTKVTARLRTPQDGIFSGTVAAYDSLNATYRVTFERPGLGTHAIPDFEIVSENFHEMLP 486


>gi|145484575|ref|XP_001428297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395382|emb|CAK60899.1| unnamed protein product [Paramecium tetraurelia]
          Length = 596

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 50/203 (24%)

Query: 604 KEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVR----------RWCTFEWF 653
           K++K ++N  K+ P K  ++   + ++     + C+ +  V           +W   E+F
Sbjct: 102 KKIKKNQNYRKSIPQKFDINDNTQDMTFYFSQTQCIDNQSVYDNKNISQNFCKWIQHEYF 161

Query: 654 YSAIDYPWFSNREFVEYLNHVGLGHIPRLTR--VEWGVIRSSLGKPRRLSKRFLHDEREK 711
           YS +DY +FS  EF + L       IP  ++   EW +I+ ++G+PRR S  FL  E  K
Sbjct: 162 YSHLDYTYFSLNEFQQMLTKAS---IPLGSKSIAEWRIIKMAVGQPRRFSFYFLQQEMSK 218

Query: 712 LKQYR-----------------------------------ESRVIAIHPKTRELHDGSVL 736
           L +YR                                   +  V A+HP  + +H G +L
Sbjct: 219 LTKYRSVIRNYLFDQNYPIHRDIRNLDLIHDIVRLAPFNVDQTVYAVHPICKHVHVGQIL 278

Query: 737 TIDHDKCRVQFDRPELGVEFVMD 759
           + +     ++F +PELGV  + D
Sbjct: 279 STNLPTITIKFSQPELGVHKISD 301


>gi|219362349|ref|NP_001136980.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
 gi|194697848|gb|ACF83008.1| unknown [Zea mays]
 gi|414875871|tpg|DAA53002.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 239

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)

Query: 1094 SDKNEAQIPSELITSCVATLLMIQTCTE-RHTPADVAQIIDSAVSSLHPCCPQNLPIYRE 1152
            SD    Q+PS+LI++C+AT++ I+  ++ RH   +VA +++ A+S L P CPQNL +Y E
Sbjct: 150  SDSRGVQLPSDLISNCIATVISIKRLSDSRHPFGNVAGVLEHALSMLRPSCPQNLGVYTE 209

Query: 1153 IEMCMGRIKTQILALIPTS 1171
            I+  +  I  QI AL+PT+
Sbjct: 210  IKRDLCTIANQIFALVPTA 228


>gi|195997847|ref|XP_002108792.1| hypothetical protein TRIADDRAFT_19868 [Trichoplax adhaerens]
 gi|190589568|gb|EDV29590.1| hypothetical protein TRIADDRAFT_19868, partial [Trichoplax
           adhaerens]
          Length = 214

 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 40/205 (19%)

Query: 635 LSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRS 692
           L   L  +   +WC  EWFYS ID   F  + EFV  L     G   R LTR +WG++R 
Sbjct: 4   LKNLLKLSKAHKWCYNEWFYSNIDKALFDGDSEFVLCLKESFPGLKTRKLTRFQWGLLRR 63

Query: 693 SLGKPRRLSKRFLHDEREKLKQYRE-------------------------------SRVI 721
            +G+PRR S  F  +ER  LK  R+                               S   
Sbjct: 64  LMGRPRRCSATFFEEERNVLKDKRQKIRSLQQKKTIDLELVKDLPEEIPPLLVVGTSVTA 123

Query: 722 AIHPKTRELHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA----- 774
            +    R L  G +  +D  + + R+ FDRP LG  ++ D + +   P++++ ++     
Sbjct: 124 FLRNPQRGLFTGRIEAVDTANKRYRITFDRPGLGTHYIDDTEVLSEEPVESIFKSSLVAK 183

Query: 775 LRRQISADKFSAISKELQVNGHPNF 799
            R + S+  FS ++    V   P+F
Sbjct: 184 QRPRSSSSLFSNVTPPRSVRQTPHF 208


>gi|66807769|ref|XP_637607.1| RmlC-like cupin family protein [Dictyostelium discoideum AX4]
 gi|60466021|gb|EAL64088.1| RmlC-like cupin family protein [Dictyostelium discoideum AX4]
          Length = 999

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 13/97 (13%)

Query: 646 RWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFL 705
           +W  +EWFYS +D P++   EF   ++   +    +LT+ EW  IRS + KPRRLSK+F 
Sbjct: 572 KWAYYEWFYSDLDTPFYFYNEFQLLIHQFPISK--KLTKTEWNSIRSKMRKPRRLSKQFY 629

Query: 706 HDEREKLKQYRES-----------RVIAIHPKTRELH 731
            + R KL   RE+           + + I P +R L+
Sbjct: 630 DEARSKLYHTRETVRYSMLNNDHLKFLQIEPDSRVLY 666


>gi|145478713|ref|XP_001425379.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392449|emb|CAK57981.1| unnamed protein product [Paramecium tetraurelia]
          Length = 552

 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 40/151 (26%)

Query: 646 RWCTFEWFYSAIDYPWFSNREFVEYLN--HVGLGHIPRLTRVEWGVIRSSLGKPRRLSKR 703
           +W   E+FYS +DY +FS  EF + LN  +V LG   + +  EW  I+ ++G+PRR S  
Sbjct: 144 KWIQHEYFYSHLDYTYFSLNEFQQMLNKANVQLG---KKSISEWRQIKMAIGQPRRFSFY 200

Query: 704 FLHDEREKLKQYRE-----------------------------------SRVIAIHPKTR 728
           FL  E  KL +YR                                      V AIHP+ +
Sbjct: 201 FLQQEMSKLAKYRSVIRNYLFDQNYPVHRDIKNLDLIRDIVRLAPFSNGQVVYAIHPECK 260

Query: 729 ELHDGSVLTIDHDKCRVQFDRPELGVEFVMD 759
            +H G +++ +     ++F + ELGV  + D
Sbjct: 261 HVHPGQIVSTNLPSITIKFMQSELGVHKIFD 291


>gi|330798967|ref|XP_003287520.1| hypothetical protein DICPUDRAFT_97729 [Dictyostelium purpureum]
 gi|325082466|gb|EGC35947.1| hypothetical protein DICPUDRAFT_97729 [Dictyostelium purpureum]
          Length = 845

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 646 RWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFL 705
           RW T+EWFYS +D P+F   EF  +++ + L    +LTR+EW  IRS + KPRRLS++F 
Sbjct: 409 RWATYEWFYSDLDTPFFFFNEFQLFIHQLQLPK--KLTRMEWNAIRSRMRKPRRLSQQFY 466

Query: 706 HDEREKLKQYRES 718
           +D R KL + RE+
Sbjct: 467 YDARNKLDRTREA 479


>gi|402592560|gb|EJW86488.1| DIRP family protein [Wuchereria bancrofti]
          Length = 555

 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 36/211 (17%)

Query: 538 RTSQNSAQSKQWKP----GRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRR 593
           R S +  +SK+  P    G+VL+  S  D N +S        +  V S  S      +  
Sbjct: 34  RMSVSKPKSKRLSPLKRGGKVLKAESDTDSNVSS----GTNNRLSVKSSESPKKAMNNGA 89

Query: 594 KMDLKRKLSSKEMKFSENSL----KTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCT 649
           + D+ R          EN++    + QP++ S +  + L  +K      L     RRW  
Sbjct: 90  QRDISR----------ENAIPRTARPQPSEISPTMRENLRHLK----NVLKLPKARRWVY 135

Query: 650 FEWFYSAIDYPWFS-NREFVEYLNHVGLG-HIPRLTRVEWGVIRSSLGKPRRLSKRFLHD 707
            E+FYS +D   FS + EFV+ L+ +       +L R EW  IR  +GKPRR S+ FL++
Sbjct: 136 CEFFYSGVDQQLFSGDNEFVQLLHEMFPNLRTLKLCRPEWRAIRRLIGKPRRCSEAFLNE 195

Query: 708 EREKLKQYRESRVIAIHPKTRELHDGSVLTI 738
           ER+ L+  R         + R+++DGS++ I
Sbjct: 196 ERDALETKRA--------RIRQIYDGSLMNI 218


>gi|170591955|ref|XP_001900735.1| DIRP family protein [Brugia malayi]
 gi|158591887|gb|EDP30490.1| DIRP family protein [Brugia malayi]
          Length = 555

 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 10/96 (10%)

Query: 645 RRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLG-HIPRLTRVEWGVIRSSLGKPRRLSK 702
           RRW   E+FYS +D   F  + EFV+ L+ +       +L R EW  IR  +GKPRR S+
Sbjct: 131 RRWVYCEFFYSGVDQQLFXGDNEFVQLLHEMFPNLRTLKLCRPEWRAIRRLIGKPRRCSE 190

Query: 703 RFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTI 738
            FL++ERE L+  R         + R+++DGS++ I
Sbjct: 191 AFLNEEREALETKRA--------RIRQIYDGSLMNI 218


>gi|193636407|ref|XP_001949408.1| PREDICTED: protein lin-9 homolog isoform 1 [Acyrthosiphon pisum]
 gi|328706351|ref|XP_003243065.1| PREDICTED: protein lin-9 homolog isoform 2 [Acyrthosiphon pisum]
          Length = 602

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 48/261 (18%)

Query: 555 LEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLK 614
           L+   V+ +   +I L  P  + P+ S +   T++   +   +K       ++  +N + 
Sbjct: 120 LQTPKVSVKTTPTIKLKTPNVKTPIKSASKKSTENGVAKPKTIK-------LETPKNIVS 172

Query: 615 T-QPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYL-N 672
           T +P  +SL ++ R  ++  +L         + W  +EWFYS ID P     +F+  + +
Sbjct: 173 TSKPKSDSLERK-RCQNVGLRLRKIFQLPKAKNWIYYEWFYSNIDKPLLYESDFMMCVQD 231

Query: 673 HVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDE-RE--------KLKQYRESR---- 719
                 I  +TR EW ++R  +GKPRR S+ F  +E RE        +L Q R++R    
Sbjct: 232 FFPSFKIKTMTRTEWCMLRRMMGKPRRCSQNFFDEEIRELDRRRRKIRLLQQRKARDELL 291

Query: 720 -----------------VIAIHPKTRE--LHDGSV--LTIDHDKCRVQFDRPELGVEFVM 758
                            V A+     E  L +G++  L + ++  R+ FD+P LG   V+
Sbjct: 292 FKDIPDEIPLQLTVGTKVTAMLRNNTEDGLFNGTIEALDVSNNTYRINFDKPGLGTHSVL 351

Query: 759 DIDSMPSNPLDNMPEALRRQI 779
           D +   + P    PE + + +
Sbjct: 352 DYEVCSNQP----PETISKNV 368


>gi|313219846|emb|CBY30762.1| unnamed protein product [Oikopleura dioica]
 gi|313232455|emb|CBY24123.1| unnamed protein product [Oikopleura dioica]
          Length = 393

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVG-LGHIPRLTRVEWGVIRSSLGKPRRLSKR 703
           RW   E+FYS ID+  F S  EF   L       H  RL RVEW +IR  LGKPRR S  
Sbjct: 22  RWAVHEFFYSDIDHAIFESESEFKLCLKETFPQLHGKRLRRVEWNMIRKLLGKPRRFSTS 81

Query: 704 FLHDEREKLKQYRESRVIAIHPKTRELHDGSVL 736
           FL +ER+ LK  R+        K R L  G  L
Sbjct: 82  FLEEERDSLKSKRD--------KIRVLQRGGTL 106


>gi|260827028|ref|XP_002608467.1| hypothetical protein BRAFLDRAFT_96604 [Branchiostoma floridae]
 gi|229293818|gb|EEN64477.1| hypothetical protein BRAFLDRAFT_96604 [Branchiostoma floridae]
          Length = 483

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 43/166 (25%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEWGVIRSSLGKPRR 699
           +WC +EWFYS +D   F  + +F   L        P     +L+RVEW  IR  +GKPRR
Sbjct: 60  KWCIYEWFYSNLDKALFEGDNDFCVCLRE----SFPQLKTRKLSRVEWSKIRRLMGKPRR 115

Query: 700 LSKRFLHDEREKLKQYRES-------------------------RVIA--IHPKTRELHD 732
            S  F  +ER  L+  R+                           VI   +  + R  HD
Sbjct: 116 CSSSFFAEERSALEAKRQKIRLLQQRKVTDISNFKDLPDEIPLPLVIGTKVTARLRGPHD 175

Query: 733 G----SVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
           G     +  +D  +   RV FDRP LG   + D + + +   + MP
Sbjct: 176 GLFTGQIEAVDTANTSYRVTFDRPGLGTHTIPDTEVLSNEQQETMP 221


>gi|391325281|ref|XP_003737167.1| PREDICTED: protein lin-9 homolog [Metaseiulus occidentalis]
          Length = 531

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 36/196 (18%)

Query: 613 LKTQPNKNSLSQEDR--LLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNR-EFVE 669
           +KT+   +SL   DR  L +   KL   L      +W  +E+FYS ID   F+   EF  
Sbjct: 89  VKTKQRISSLRGPDRSVLSAASSKLKNFLKLPKAHKWVMYEFFYSNIDDCLFNQENEFSS 148

Query: 670 YLNH-VGLGHIPRLTRVEWGVIRSSLGKPRRLSKRF-------LHDEREKLKQYRE---- 717
           YL           LTR EW  IR  +GKPRR S  F       LH++RE ++  ++    
Sbjct: 149 YLKQSFPFLKTRNLTRTEWSRIRRFMGKPRRCSAAFFDEEVRALHEKRELIRHLQQRLID 208

Query: 718 -------------------SRVIAIHPKTRELHDGSVLTIDHDKC--RVQFDRPELGVEF 756
                              ++V+A   +   L  G++  +D      R+ FDRPE+G+  
Sbjct: 209 KLEHVEHLPPEIPLSLVIGTKVMAYVHEKDGLFVGTIDAVDTQSATYRISFDRPEVGIVT 268

Query: 757 VMDIDSMPSNPLDNMP 772
             D + +    ++ MP
Sbjct: 269 CPDFEVLSLQRVERMP 284


>gi|324507776|gb|ADY43291.1| Protein lin-9 [Ascaris suum]
          Length = 609

 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 13/124 (10%)

Query: 623 SQEDRLLSMKE---KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLG- 677
           +Q D   S+KE   +L   L     RRW   E+FYS +D   F  + EF++ L       
Sbjct: 163 AQADLSDSLKENLRRLKNVLKLPKARRWVYCEFFYSGVDQQLFLGDNEFMQLLRESFPNL 222

Query: 678 HIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLT 737
               L R EW  IR  +GKPRR S+ FL++ER  L+  R         K R++++GSV+T
Sbjct: 223 RCTMLRRPEWRTIRRLIGKPRRCSQAFLNEERAALEIKRA--------KIRQIYEGSVVT 274

Query: 738 IDHD 741
           +  D
Sbjct: 275 LPPD 278


>gi|308471847|ref|XP_003098153.1| CRE-LIN-9 protein [Caenorhabditis remanei]
 gi|308269304|gb|EFP13257.1| CRE-LIN-9 protein [Caenorhabditis remanei]
          Length = 647

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 59/130 (45%), Gaps = 18/130 (13%)

Query: 613 LKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYL 671
            KT  N+ S      + S  +KL   L     R+W   E+FYSAID   F    EF   +
Sbjct: 186 FKTFKNQTSEDVSTFMRSNIKKLYNLLRYKKARQWVMCEFFYSAIDQQIFKEENEFASII 245

Query: 672 NHVGLGHIPRL-----TRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPK 726
                   P L     TRVEW  IR  LGKPRR SK F  +ER  L++ R         K
Sbjct: 246 KE----SFPNLKNWNLTRVEWRTIRKMLGKPRRCSKVFFEEERMYLEEKRM--------K 293

Query: 727 TRELHDGSVL 736
            R +++GS L
Sbjct: 294 IRSVYEGSYL 303


>gi|341900856|gb|EGT56791.1| CBN-LIN-9 protein [Caenorhabditis brenneri]
          Length = 645

 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 53/110 (48%), Gaps = 18/110 (16%)

Query: 633 EKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVE 686
           +KL   L     R+W   E+FYSAID   F    EF   L        P     +LTRVE
Sbjct: 204 KKLYNLLRYKKARQWVMCEFFYSAIDEQIFKEENEFATILKE----SFPNLKNWQLTRVE 259

Query: 687 WGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVL 736
           W  IR  LGKPRR SK F  +ER  L++ R         K R +++GS L
Sbjct: 260 WRTIRKLLGKPRRCSKVFFEEERMYLEEKRT--------KIRSVYEGSYL 301


>gi|357612330|gb|EHJ67923.1| aly protein [Danaus plexippus]
          Length = 571

 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 56/284 (19%)

Query: 571 VAPTGQAPVASP---ASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDR 627
            +P  Q+P  +P   A +P+K  S +K    +K   K  K +E S +   N++   +  +
Sbjct: 92  TSPPKQSPKRTPKILAKTPSKPSSAKK----QKSPMKTPKHNEKSEEKCGNQSPDRKSGQ 147

Query: 628 LLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNR-EFVEYLNHVGLGHIP-----R 681
            + M+  L   L      +W  FE+FYS ID   F    +F+  L        P     +
Sbjct: 148 RIGMR--LRNLLKLPKAHKWVCFEYFYSNIDKALFDGENDFMICLKE----SFPQLTNKK 201

Query: 682 LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE------------------------ 717
           LT+V+W  IR  +GKPRR S+ F  +ER++L++ R+                        
Sbjct: 202 LTQVQWAKIRRMMGKPRRCSQAFFAEERKELERKRKLIRYIQQRKNADICVKDLPSEIPM 261

Query: 718 -----SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNP-- 767
                ++V A   K ++ L  G +  +D  ++  R+ F+RP+LG   V D + + + P  
Sbjct: 262 QLVVGTKVTARLRKPQDGLFTGCIDAVDTSNNTYRITFERPKLGTHSVPDYEVLSNEPPD 321

Query: 768 ---LDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFASD 808
              L ++ +  R +    +  ++ +    N + + G PM+  +D
Sbjct: 322 TISLSSITQKFRPRYVMQEIFSLYQPTFPNKNTSQGDPMMGCTD 365


>gi|268574972|ref|XP_002642465.1| C. briggsae CBR-LIN-9 protein [Caenorhabditis briggsae]
          Length = 408

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 12/107 (11%)

Query: 633 EKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNR-EFVEYL--NHVGLGHIPRLTRVEWGV 689
           +KL   L     R+W   E+FYSA+D   F    EF   +  N   L +   LTRVEW  
Sbjct: 205 KKLYNLLRYKKARQWVMCEFFYSAMDEQIFKQENEFANIIKENFPNLKNW-NLTRVEWRA 263

Query: 690 IRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVL 736
           IR  LGKPRR SK F  +ER  L++ R         K R +++GS L
Sbjct: 264 IRKMLGKPRRCSKVFFEEERMYLEEKRM--------KIRSVYEGSYL 302


>gi|189236498|ref|XP_975203.2| PREDICTED: similar to Lin-9 homolog (mLin-9) (Type I interferon
           receptor beta chain-associated protein) (TUDOR gene
           similar 1 protein) [Tribolium castaneum]
          Length = 597

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 53/264 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIP--RLTRVEWGVIR 691
           +L   L      +W  +EWFYS ID   FS               +    LTRV+W  IR
Sbjct: 165 RLRNVLKLPKAHKWVCYEWFYSDIDRCLFSGENDFSICLKESFPELKTRELTRVQWTKIR 224

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------------------------------SRVI 721
             +GKPRR S+ F H+ER +L++ R+                              ++V 
Sbjct: 225 RMMGKPRRCSQAFFHEERLELEKKRKKIRALQQRKATELSSFKDLPPEIPMQLVIGTKVT 284

Query: 722 AIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ 778
           A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE L   
Sbjct: 285 ARLRKPQDGLFTGSIDAVDTSNNTYRITFERQGLGTHSVPDYEVLSNEP----PETLSLS 340

Query: 779 ISADKF----SAISKELQVNGHPNF---GSPMLFASDGHLEKAPILPNTLQKQAK-GDMN 830
              +KF       +   +++ + N      P+L    G +   PI P   Q++ + G   
Sbjct: 341 SFQNKFRPWNGITTYAAKISPYTNLKFKKDPLL---SGSMINKPIFP---QEEGRIGGYP 394

Query: 831 HALPQAKSLATDIVSAQQAAYGQL 854
             L +   L T I+S ++    +L
Sbjct: 395 TKLLEKMVLITKILSVKRTKISEL 418


>gi|71997724|ref|NP_001023015.1| Protein LIN-9, isoform a [Caenorhabditis elegans]
 gi|8515823|gb|AAF76193.1|AF269694_1 LIN-9S [Caenorhabditis elegans]
 gi|14530698|emb|CAA77454.2| Protein LIN-9, isoform a [Caenorhabditis elegans]
          Length = 642

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 21/147 (14%)

Query: 613 LKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYL 671
            KT  N+ S      + +  +KL   L     R+W   E+FYSAID   F    EF   +
Sbjct: 184 FKTYKNQTSEDVSTFMRANIKKLYNLLRYKKARQWVMCEFFYSAIDEQIFKEENEFATII 243

Query: 672 NHVGLGHIPRL-----TRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPK 726
                   P L     TR+EW  IR  LGKPRR SK F  +ER  L++ R         K
Sbjct: 244 RE----SFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYLEEKRM--------K 291

Query: 727 TRELHDGSVL---TIDHDKCRVQFDRP 750
            R +++GS L   +ID      +  RP
Sbjct: 292 IRSVYEGSYLNDPSIDLKDLPAKLPRP 318


>gi|270005986|gb|EFA02434.1| hypothetical protein TcasGA2_TC008121 [Tribolium castaneum]
          Length = 579

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 53/264 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIP--RLTRVEWGVIR 691
           +L   L      +W  +EWFYS ID   FS               +    LTRV+W  IR
Sbjct: 147 RLRNVLKLPKAHKWVCYEWFYSDIDRCLFSGENDFSICLKESFPELKTRELTRVQWTKIR 206

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE------------------------------SRVI 721
             +GKPRR S+ F H+ER +L++ R+                              ++V 
Sbjct: 207 RMMGKPRRCSQAFFHEERLELEKKRKKIRALQQRKATELSSFKDLPPEIPMQLVIGTKVT 266

Query: 722 AIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ 778
           A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE L   
Sbjct: 267 ARLRKPQDGLFTGSIDAVDTSNNTYRITFERQGLGTHSVPDYEVLSNEP----PETLSLS 322

Query: 779 ISADKF----SAISKELQVNGHPNF---GSPMLFASDGHLEKAPILPNTLQKQAK-GDMN 830
              +KF       +   +++ + N      P+L    G +   PI P   Q++ + G   
Sbjct: 323 SFQNKFRPWNGITTYAAKISPYTNLKFKKDPLL---SGSMINKPIFP---QEEGRIGGYP 376

Query: 831 HALPQAKSLATDIVSAQQAAYGQL 854
             L +   L T I+S ++    +L
Sbjct: 377 TKLLEKMVLITKILSVKRTKISEL 400


>gi|71997738|ref|NP_001023016.1| Protein LIN-9, isoform b [Caenorhabditis elegans]
 gi|29429174|sp|P30630.3|LIN9_CAEEL RecName: Full=Protein lin-9; AltName: Full=Abnormal cell lineage
           protein 9
 gi|8515821|gb|AAF76192.1|AF269693_1 LIN-9L [Caenorhabditis elegans]
 gi|14530697|emb|CAC42391.1| Protein LIN-9, isoform b [Caenorhabditis elegans]
          Length = 644

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 65/147 (44%), Gaps = 21/147 (14%)

Query: 613 LKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYL 671
            KT  N+ S      + +  +KL   L     R+W   E+FYSAID   F    EF   +
Sbjct: 186 FKTYKNQTSEDVSTFMRANIKKLYNLLRYKKARQWVMCEFFYSAIDEQIFKEENEFATII 245

Query: 672 NHVGLGHIPRL-----TRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPK 726
                   P L     TR+EW  IR  LGKPRR SK F  +ER  L++ R         K
Sbjct: 246 RE----SFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYLEEKRM--------K 293

Query: 727 TRELHDGSVL---TIDHDKCRVQFDRP 750
            R +++GS L   +ID      +  RP
Sbjct: 294 IRSVYEGSYLNDPSIDLKDLPAKLPRP 320


>gi|326432005|gb|EGD77575.1| hypothetical protein PTSG_08672 [Salpingoeca sp. ATCC 50818]
          Length = 654

 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 44/229 (19%)

Query: 580 ASPASSPTKHQS--------RRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSM 631
            +P   P + QS        R K+   R+     ++ S+ S   +   N    +  ++ M
Sbjct: 133 GTPGRRPKREQSADEGPPTKRGKVKTPRRQPRPSLRGSKTSSPARAADNDPELQPWMVDM 192

Query: 632 KEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSN-REFVEYLNHV--GLGHIPRLTRVEWG 688
             +L+  L + +   W  +E+FYS++D     + R F E+L      +  +    R EW 
Sbjct: 193 AHRLTKGLKTRLFLCWSMYEFFYSSLDKVILKDIRPFEEFLTRTFPNVATVREFRRPEWF 252

Query: 689 VIRSSLGK-PRRLSKRFLHDEREKLKQYRE-----------------------------S 718
            IR   G+ PRR S  F+  ER+ L  +R                               
Sbjct: 253 FIRKQFGRRPRRFSPAFVKQERQWLMTHRAVLRQLQYGEFASTKGLDLPPDVPLVLSVGD 312

Query: 719 RVIA-IHPKTRELHDGSVLTI--DHDKCRVQFDRPELGVEFVMDIDSMP 764
           RV+A + P    L  G +L +    D  R+ FDR ELG++ V   D  P
Sbjct: 313 RVLAKLLPYKGLLSTGMILAVLFREDSYRIAFDRKELGIQTVPAEDVAP 361


>gi|452822801|gb|EME29817.1| MYB domain transcription factor family [Galdieria sulphuraria]
          Length = 676

 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 45/197 (22%)

Query: 612 SLKTQPNKNSLSQE------DRLLSMKEKLSGCLSSNM-VRRWCTFEWFYSAIDYPWFSN 664
           +++T+PNK +L  +      D   + +  L   LS +  + RWC  E+F S +D  + + 
Sbjct: 299 TIETRPNKTALQCDTNYNTFDTGSTARNVLEQVLSMDTGIVRWCLMEFFDSYVDSTYLNF 358

Query: 665 REFVEYL-NHVGLGHIPRLTRVEWGVIR-------SSLGKPRRLSKRFLHDEREKLKQYR 716
            EF + L   +G+     L+  EW  +R       SS  KPRRLSK+FL +ER++L  YR
Sbjct: 359 SEFSDVLEKEMGIDTNILLSNREWHFLRKAMCDIFSSGTKPRRLSKKFLLEERQRLCSYR 418

Query: 717 E----------------------------SRVIAIHPKTRELHDGSVLTID--HDKCRVQ 746
                                        S+VIA +    E++   V+T++   ++  V+
Sbjct: 419 NLVRQYLINSQQVEFYPWAPCPSKSLTVGSKVIARNWMRGEVYSAYVVTLNPLKEQITVK 478

Query: 747 FDRPELGVEFVMDIDSM 763
           FD  +L    + D D M
Sbjct: 479 FDEAQLASSSIKDTDVM 495


>gi|145477645|ref|XP_001424845.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391912|emb|CAK57447.1| unnamed protein product [Paramecium tetraurelia]
          Length = 248

 Score = 60.8 bits (146), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 15/125 (12%)

Query: 604 KEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVR----------RWCTFEWF 653
           K++K ++N  K+ P K  + +    ++     + CL++  V           +W   E+F
Sbjct: 102 KKIKKNQNYRKSIPQKFDMDENANDMTYYFSQTQCLNNQCVYDNKNISQNFCKWIQHEYF 161

Query: 654 YSAIDYPWFSNREFVEYLNHVGLGHIPRLTR--VEWGVIRSSLGKPRRLSKRFLHDEREK 711
           YS +DY +FS  EF + L+      IP  ++   EW +I+ ++G+PRR S  FL  E  K
Sbjct: 162 YSHLDYTYFSLNEFQQMLSKAS---IPLGSKSIAEWRIIKMAVGQPRRFSFYFLQQEMSK 218

Query: 712 LKQYR 716
           L +YR
Sbjct: 219 LTKYR 223


>gi|405965323|gb|EKC30705.1| Lin-9-like protein [Crassostrea gigas]
          Length = 516

 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 125/323 (38%), Gaps = 64/323 (19%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF--SNREFVEYLNHVGLGHIPRLTRVEWGVIR 691
           +L   L      +W  +EWFYS +D P F   N   +          + +L RVEW  IR
Sbjct: 83  RLRNLLKLPKAHKWVCYEWFYSNLDIPLFLMENDFSICMKESFPQLKMKKLRRVEWCKIR 142

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELH-------------------- 731
             +GKPRR S  F  +ER  L+  R    +    K  EL                     
Sbjct: 143 RLMGKPRRCSPAFFEEERGALEARRTKIRLLQQRKMSELQTFKDLPEEIPMHLVIGTKVT 202

Query: 732 -----------DGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEALRRQ 778
                       G V  +D   +  R+ FDRP +G   + D + +   P + +P      
Sbjct: 203 ARLRKPQDGLFTGVVDALDTVTNSYRITFDRPGIGTHSIPDYEVLSVEPQETIP------ 256

Query: 779 ISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPNTLQKQAKGDMNHALPQAKS 838
           +SA +     ++  +   P F  P L + +  L+  P+L                    +
Sbjct: 257 LSAFQQKHRPRQPTLFSPPKF-VPSLGSPNPELDNDPLL-----------------SGST 298

Query: 839 LATDIVSAQQAAYGQLCTVPQIQA-REATVRALSEEALLMELKNTNNDILESQNGGESSL 897
               ++S +   YG       +Q  R + + +L ++  + +LKN N +  ++++  +   
Sbjct: 299 FTGKLLSLEGGTYGGFPIKFLVQVTRLSKILSLKKD-WINQLKNLNTEAEKAKSFQQPIS 357

Query: 898 KDSEPLKKHIATVLVQLKEANDQ 920
           +D    +K  AT +++L++ N Q
Sbjct: 358 RD---FQKKYATTVLELEQLNKQ 377


>gi|339241263|ref|XP_003376557.1| putative protein lin-9 [Trichinella spiralis]
 gi|316974720|gb|EFV58198.1| putative protein lin-9 [Trichinella spiralis]
          Length = 546

 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 33/158 (20%)

Query: 645 RRWCTFEWFYSAIDYPWFSN-REFVEYL-NHVGLGHIPRLTRVEWGVIRSSLGKPRRLSK 702
           RRW  +E+FYS ID   F    EF + L ++  +    R+  VE+  I+  +GKPRRLS 
Sbjct: 127 RRWVYYEFFYSDIDRELFLGPNEFQQCLQDYFPVVSTSRINDVEYRQIKRLIGKPRRLSP 186

Query: 703 RFLHDEREKLKQYRE------------------------------SRVIAIHPKTRE-LH 731
            FL +ERE L + R+                              ++V A     R+ + 
Sbjct: 187 AFLFEEREMLDKKRQRIRDIQKGGAYVVGTDVQLPSKIPQPLTVGAKVFAKLNGNRDGIF 246

Query: 732 DGSVLTIDHDKCRVQFDRPELGVEFVMDIDSMPSNPLD 769
            G+V  +     R+ F++P +    V D+D M   P D
Sbjct: 247 AGTVDALVESGYRIIFEKPTVPAAIVPDVDVMADQPED 284


>gi|347972303|ref|XP_001237635.3| AGAP004624-PA [Anopheles gambiae str. PEST]
 gi|333469314|gb|EAU76662.3| AGAP004624-PA [Anopheles gambiae str. PEST]
          Length = 578

 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 598 KRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAI 657
           KRK+  +E   + NS+K   N + L        +  +    L      R+C FE+FYS I
Sbjct: 121 KRKIDPEEK--AHNSMKLM-NTSGLENPSWFQKLGNQFRNFLLLPKAHRFCYFEFFYSDI 177

Query: 658 DYPWFSNREFVEYLNHVGLGHIPRL-----TRVEWGVIRSSLGKPRRLSKRFLHDEREKL 712
           D   FS     E L      H P+L     TR EW  IR S GKPR  S  F+ +ER +L
Sbjct: 178 DRNLFSAPSDFEQLVRT---HYPQLKTNNLTRAEWRKIRGSFGKPRLFSPAFIMEERLEL 234

Query: 713 KQYRE 717
            + RE
Sbjct: 235 ARKRE 239


>gi|325189643|emb|CCA24128.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 930

 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 19/100 (19%)

Query: 638 CLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYL-----NHVGLGH------------IP 680
           C+++     W  F WFY  +D  +F+  EF+E L      +V   H            I 
Sbjct: 553 CINAKSGLPW--FHWFYPFLDASFFAQNEFMECLRKLQCQNVCAFHSYCIDTPMDQQQIE 610

Query: 681 RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRV 720
           + TR +W  IR+++G PRRLS  FL  E+EKL+ +R+S++
Sbjct: 611 KATRHKWSSIRAAMGHPRRLSNLFLRQEKEKLEVFRKSQL 650


>gi|267844865|ref|NP_001161185.1| aly protein [Bombyx mori]
 gi|262089804|gb|ACY24884.1| Aly [Bombyx mori]
          Length = 570

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 44/215 (20%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNR-EFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +W  FE+FYS ID   F    +F+  L         R LTR +W  IR
Sbjct: 155 RLRNLLKLPKAHKWVCFEYFYSNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIR 214

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE-----------------------------SRVIA 722
             +GKPRR S+ F  +ER++L++ R                              ++V A
Sbjct: 215 RMMGKPRRCSQAFFDEERKELERKRRLIRYVQQQKSADVCVKDLPTEIPMQLVVGTKVTA 274

Query: 723 IHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNP-----LDNMPEA 774
              + ++ L  G +  +D  ++  R+ F+RP+LG   V D + + + P     L ++ + 
Sbjct: 275 RLRRPQDGLFTGCIDAVDTSNNTYRITFERPKLGTHSVPDYEVLSNEPPDTICLTSITQR 334

Query: 775 LR-RQISADKFSAISKELQVNGHPNFGSPMLFASD 808
            R R++  D  S  S  +Q N     G P++  SD
Sbjct: 335 FRPRKVIQDLLSLYS-PIQKNSQ---GDPLIGCSD 365


>gi|256081087|ref|XP_002576805.1| lin-9 [Schistosoma mansoni]
 gi|353230453|emb|CCD76624.1| putative lin-9 [Schistosoma mansoni]
          Length = 621

 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 37/176 (21%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIP--RLTRVEWGVIR 691
           +L   L      +W  +EWFYS +D P                 ++   RL+R  W ++R
Sbjct: 100 RLRNVLKLPKAHKWVFYEWFYSNLDRPLLLGENDFRICLRESFPNVKTRRLSRAHWSLLR 159

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE--------------------------------SR 719
             +GKPRR S  F  +ER  L + RE                                ++
Sbjct: 160 RLMGKPRRCSTAFFDEERRSLNEKREKIRTLQATRSVQLEFLRDLPDDMHVPMPLIIGTK 219

Query: 720 VIA-IHPKTRELHDGSVLTIDHDK-C-RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
           + A +   T  L+ G V  ID  + C RV FD+P LG   + D + +   P + +P
Sbjct: 220 ITARVRYPTDGLYTGKVDAIDALRHCYRVTFDKPALGTRSIPDYEVLSILPQETIP 275


>gi|390354599|ref|XP_001194638.2| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog
           [Strongylocentrotus purpuratus]
          Length = 751

 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 39/171 (22%)

Query: 631 MKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIP--RLTRVEWG 688
           + ++L   L      +WC +EWFYS ID   F      +         +   +LT+VEW 
Sbjct: 342 LGQRLKNLLKLPKAYKWCIYEWFYSNIDKSLFEGENDFKICLRESFPQLKQRKLTKVEWC 401

Query: 689 VIRSSLGKPRRLSKRFL---------HDEREKLKQYRESRVI------------------ 721
           ++R  +GKPRR S  F            ++ ++ Q+R+ + +                  
Sbjct: 402 IVRRLMGKPRRCSPAFFEEERAALEERRQKLRMLQHRKGQELDLAEVKDLPEEIPIPLCI 461

Query: 722 --AIHPKTRELHDGSVLTIDHDKC-------RVQFDRPELGVEFVMDIDSM 763
              +  + R  HDG + T   D         RV FDRP  G   V D + +
Sbjct: 462 GTKVTARLRAPHDG-LFTGQIDALDPVDATYRVTFDRPNFGTHSVPDTEVL 511


>gi|156380687|ref|XP_001631899.1| predicted protein [Nematostella vectensis]
 gi|156218947|gb|EDO39836.1| predicted protein [Nematostella vectensis]
          Length = 488

 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 2/99 (2%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLG-HIPRLTRVEWGVIR 691
           KL   L      +WC +EWFYS++D   F  + +F   L        + ++ R EW  +R
Sbjct: 59  KLQNLLKLPKAAKWCYYEWFYSSVDRALFEGDNDFCICLRESFPNLKVKKMRRAEWREVR 118

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTREL 730
             +GKPRR S  F  +ER+ L++ R+   +    K  EL
Sbjct: 119 RLMGKPRRCSPSFFLEERQALQEKRKKIRLLQQKKVTEL 157


>gi|226467686|emb|CAX69719.1| Lin-9 homolog [Schistosoma japonicum]
          Length = 622

 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 37/176 (21%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIP--RLTRVEWGVIR 691
           +L   L      +W  +EWFYS +D P                 ++   RL+R  W ++R
Sbjct: 100 RLRNVLKLPKAHKWVFYEWFYSNLDRPLLLGENDFRICLRESFPNVKTRRLSRAHWSLLR 159

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE--------------------------------SR 719
             +GKPRR S  F  +ER  L + RE                                ++
Sbjct: 160 RLMGKPRRCSTAFFDEERRSLNEKREKIRTLQATRSVQLEFLRDLPDDMHVPMPLIIGTK 219

Query: 720 VIA-IHPKTRELHDGSVLTIDHDK-C-RVQFDRPELGVEFVMDIDSMPSNPLDNMP 772
           + A +   T  L+ G V  ID  + C RV FD+P LG   + D + +   P + +P
Sbjct: 220 ITARVRYPTDGLYTGKVDAIDALRHCYRVTFDKPALGTRSIPDYEVLSILPQETIP 275


>gi|242025434|ref|XP_002433129.1| lin-9, putative [Pediculus humanus corporis]
 gi|212518670|gb|EEB20391.1| lin-9, putative [Pediculus humanus corporis]
          Length = 644

 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 43/169 (25%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNR-EFVEYLNHVGLGHIPRL-----TRVEW 687
           +L   L      +W  +EWFYS ID   F  + +F+  L        P+L     TR EW
Sbjct: 226 RLRNLLKLPKAHKWVCYEWFYSNIDKVLFQGKNDFMICLQE----SFPQLKTTSLTRTEW 281

Query: 688 GVIRSSLGKPRRLSKRFLHDEREKLKQYR------ESRVIAIHPKTRELHD--------- 732
             IR  +GKPRR S+ F  +ER++L++ R      + R ++     ++L D         
Sbjct: 282 CQIRRLMGKPRRCSQAFFDEERQELERKRTKIRQLQQRKLSDLSSCKDLPDRVPLQLTVG 341

Query: 733 ----------------GSVLTID--HDKCRVQFDRPELGVEFVMDIDSM 763
                           G+V  +D  ++  R+ F+RP LG   V D + +
Sbjct: 342 RKVTARLRKPQDGLFTGTVDAVDTSNNTYRITFERPGLGTYSVPDYEVL 390


>gi|198422999|ref|XP_002120485.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 766

 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 37/157 (23%)

Query: 648 CTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRRLSKRF- 704
           C FEWFYS +D      + +F   L     G   R LTR  W  IR  +GKPRR S  F 
Sbjct: 38  CIFEWFYSHLDTALLKGDNDFCMCLKESFPGLKTRNLTRAHWCKIRRLMGKPRRCSAAFF 97

Query: 705 ------LHDEREKLKQYRESRV--------------------------IAIHPKTRELHD 732
                 L+++R++++Q ++S++                            +H     L  
Sbjct: 98  EEERAALNNKRDRIRQLQQSKIGRENTDAWCDLPREVPMPLVVGTNVTGHLHGSHDGLFT 157

Query: 733 GSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNP 767
           G +  +D  +   RV FDR  +G+  V DID   S P
Sbjct: 158 GQIDAVDILNSSYRVIFDRQNIGIRTVRDIDVSSSEP 194


>gi|290995751|ref|XP_002680446.1| DIRP domain-containing protein [Naegleria gruberi]
 gi|284094067|gb|EFC47702.1| DIRP domain-containing protein [Naegleria gruberi]
          Length = 1574

 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPR--LTRVEWGVIR 691
           K+   LS    R +C+ EWFY  ID+ +F   EF+E L+ +   +  R    + E   +R
Sbjct: 408 KIVKILSRKKTRTFCSSEWFYPTIDFGFFEKNEFLECLSCLDEPYRNRKSFKKSELKGLR 467

Query: 692 SSL----GKPRRLSKRFLHDEREKLKQYR 716
           + +    GKPRR S+ +L  ER KL+  R
Sbjct: 468 AEMCKKFGKPRRFSQAYLKQERAKLEMNR 496



 Score = 43.9 bits (102), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 1   MAPTRKSRSVNKRYANEVSPAKDVISPSKSKQKKKLSDK-LGPQWSKGELQRFYEAYRNY 59
            +PT K +S  K      +P+K  I PS  + +    D   G  W++ EL  F E +  Y
Sbjct: 100 FSPTHKEQSDKK-----TTPSKIQIPPSPIQSQVIQHDYPFGEPWTQEELSTFLEGFNKY 154

Query: 60  GKDWKKVAAQVRNRSAEMVEALYNMNRAYL 89
             DW  +   + +RS  M+ +LY  ++ ++
Sbjct: 155 KTDWGMIKPLLPSRSVSMINSLYETHKRFI 184


>gi|26335069|dbj|BAC31235.1| unnamed protein product [Mus musculus]
          Length = 153

 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRR 699
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR
Sbjct: 68  KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRR 123


>gi|321459181|gb|EFX70237.1| hypothetical protein DAPPUDRAFT_300555 [Daphnia pulex]
          Length = 726

 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 36/160 (22%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLG-HIPRLTRVEWGVIRSSLGKPRRLSKR 703
           +W  +EWFYS +D   F  + +F+  L        + +LTR +W  IR  +G+PRR S+ 
Sbjct: 240 KWVCYEWFYSNLDQALFEGDNDFMLCLRESFPSLKLRQLTRSQWCTIRRLMGRPRRCSQA 299

Query: 704 FLHDE-------REKLKQYRESRVIAIHPKTRELHD------------------------ 732
           F ++E       R+K++  ++ +V  +    R+L D                        
Sbjct: 300 FFNEERGELAKKRQKIRLVQQRKVSDMASLCRDLPDLIPMPLVIGTKVTARLRQPQDGLF 359

Query: 733 -GSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLD 769
            G +  +D  ++  R+ FDR  LG   V D + + +  +D
Sbjct: 360 VGQIDAVDTSNNTYRITFDRQGLGTHSVPDYEVLSNETVD 399


>gi|156549690|ref|XP_001605183.1| PREDICTED: protein lin-9 homolog [Nasonia vitripennis]
          Length = 631

 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 122/310 (39%), Gaps = 67/310 (21%)

Query: 573 PTGQAPVASPASSPTK-------HQSRRKMDLKRKLSSKEMKFSE-NSLKTQPNKNSLSQ 624
           P   +P   P  SP K       H+ +R +       SK +K  +  + + QP   + S 
Sbjct: 136 PVKPSPKKIPRPSPAKKQAKVVHHEPKRSVSTPSTPVSKPIKIEKPQTAEKQPQ--APSS 193

Query: 625 EDRLLSMK--EKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP- 680
            DR +  K   +L   L      +W  +EWFYS ID   F  + +F+  L        P 
Sbjct: 194 PDRKIGQKIGMRLRNLLKLPKAHKWVCYEWFYSNIDKTLFDGDNDFMICLKE----SFPQ 249

Query: 681 ----RLTRVEWGVIRSSLGKPRRLSKRFL---------HDEREKLKQYRESR-------- 719
               +LTRVEW  IR  +GKPRR S+ F            ++ ++ Q R++         
Sbjct: 250 LKSRKLTRVEWCKIRRMMGKPRRCSQAFFEEERRELERKRQKIRMLQQRKAADAQVFKDL 309

Query: 720 --------VIAIHPKTR------ELHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSM 763
                   VI      R       L  GS+  +D  ++  R+ F+R  LG   V D + +
Sbjct: 310 PPEIPLQLVIGTKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTHSVPDYEVL 369

Query: 764 PSNPLDNMPEALRRQISADKFSAISKELQVNGHPNFGSPMLFASDGHLEKAPILPN-TLQ 822
            + P    PE     IS   F+   +   V   P+    M  AS   L   P++ N T+ 
Sbjct: 370 SNEP----PET----ISVASFTHKFRPRHVQYVPSPAYAMKLASP-RLNNDPLISNATIA 420

Query: 823 KQAK--GDMN 830
           K+    G MN
Sbjct: 421 KKTHVGGTMN 430


>gi|297661830|ref|XP_002809424.1| PREDICTED: protein lin-9 homolog [Pongo abelii]
          Length = 325

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR
Sbjct: 258 RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR 317

Query: 692 SSLGKPRR 699
             +GKPRR
Sbjct: 318 RLMGKPRR 325


>gi|350589302|ref|XP_003482829.1| PREDICTED: protein lin-9 homolog [Sus scrofa]
          Length = 172

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRR 699
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR
Sbjct: 117 KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRR 172


>gi|149035401|gb|EDL90105.1| rCG64244 [Rattus norvegicus]
          Length = 121

 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 646 RWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIPR-LTRVEWGVIRSSLGKPRR 699
           +WC +EWFYS ID P F  + +F   L         R LTRVEWG IR  +GKPRR
Sbjct: 36  KWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRR 91


>gi|332016241|gb|EGI57154.1| Lin-9-like protein [Acromyrmex echinatior]
          Length = 703

 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 50/211 (23%)

Query: 616 QPNKNS-LSQEDRLLSMK--EKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYL 671
           +P+K S L+  DR +  K   +L   L      +W  +EWFYS ID   F  + +F+  L
Sbjct: 257 EPDKLSQLTSPDRKIGQKIGMRLRNLLKLPKAHKWVCYEWFYSNIDKVLFEGDNDFMICL 316

Query: 672 NHVGLGHIP-----RLTRVEWGVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE 717
                   P     +LTRVEW  IR  +GKPRR S+ F            ++ ++ Q R+
Sbjct: 317 KE----SFPQLKSRKLTRVEWCKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRK 372

Query: 718 SRVIA------------------IHPKTRELHD----GSVLTID--HDKCRVQFDRPELG 753
           +  I+                  +  + R+  D    GS+  +D  ++  R+ F+R  LG
Sbjct: 373 TTDISSFKDLPPEIPLQLVIGTKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLG 432

Query: 754 VEFVMDIDSMPSNPLDNMPEALRRQISADKF 784
              V D + + + P    PE +     + KF
Sbjct: 433 THSVPDYEVLSNEP----PETISLTSFSQKF 459


>gi|307181805|gb|EFN69248.1| Lin-9-like protein [Camponotus floridanus]
          Length = 588

 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 49/209 (23%)

Query: 617 PNKNSLSQEDRLLSMK--EKLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNH 673
           P+K   +  DR +  K   +L   L      +W  +EWFYS ID   F  + +F+  L  
Sbjct: 144 PDKLQPTSPDRKIGQKIGMRLRNLLKLPKAHKWVCYEWFYSNIDKILFEGDNDFMICLKE 203

Query: 674 VGLGHIP-----RLTRVEWGVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE-- 717
                 P     +LTRVEW  IR  +GKPRR S+ F            ++ ++ Q R+  
Sbjct: 204 ----SFPQLKTRKLTRVEWCKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRKTA 259

Query: 718 -------------------SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVE 755
                              ++V A   K ++ L  GS+  +D  ++  R+ F+R  LG  
Sbjct: 260 DINSFKDLPPEIPLQLVIGTKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTH 319

Query: 756 FVMDIDSMPSNPLDNMPEALRRQISADKF 784
            V D + + + P    PE +     A KF
Sbjct: 320 SVPDYEVLSNEP----PETISVASFAQKF 344


>gi|383853646|ref|XP_003702333.1| PREDICTED: protein lin-9 homolog [Megachile rotundata]
          Length = 623

 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 47/190 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEW 687
           +L   L      +W  +EWFYS ID   F  + +F+  L        P     +LTRVEW
Sbjct: 197 RLRNLLKLPKAHKWVCYEWFYSNIDKTLFEGDNDFMICLKE----SFPQLKTRKLTRVEW 252

Query: 688 GVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE--------------------- 717
             IR  +GKPRR S+ F            ++ ++ Q R+                     
Sbjct: 253 CKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRKAADINSFKDLPPEIPLQLVIG 312

Query: 718 SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           ++V A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE 
Sbjct: 313 TKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTHSVPDYEVLSNEP----PET 368

Query: 775 LRRQISADKF 784
           +     A KF
Sbjct: 369 ISVASFAQKF 378


>gi|350427413|ref|XP_003494750.1| PREDICTED: protein lin-9 homolog [Bombus impatiens]
          Length = 623

 Score = 53.5 bits (127), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 47/190 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEW 687
           +L   L      +W  +EWFYS ID   F  + +F+  L        P     +LTRVEW
Sbjct: 197 RLRNLLKLPKAHKWVCYEWFYSNIDKTLFEGDNDFMICLKE----SFPQLKTRKLTRVEW 252

Query: 688 GVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE--------------------- 717
             IR  +GKPRR S+ F            ++ ++ Q R+                     
Sbjct: 253 CKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRKAADINSFKDLPPEIPLQLVIG 312

Query: 718 SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           ++V A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE 
Sbjct: 313 TKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTHSVPDYEVLSNEP----PET 368

Query: 775 LRRQISADKF 784
           +     A KF
Sbjct: 369 ISVASFAQKF 378


>gi|380026339|ref|XP_003696909.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog [Apis florea]
          Length = 623

 Score = 53.5 bits (127), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 47/190 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEW 687
           +L   L      +W  +EWFYS ID   F  + +F+  L        P     +LTRVEW
Sbjct: 197 RLRNLLKLPKAHKWVCYEWFYSNIDKTLFEGDNDFMICLKE----SFPQLKTRKLTRVEW 252

Query: 688 GVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE--------------------- 717
             IR  +GKPRR S+ F            ++ ++ Q R+                     
Sbjct: 253 CKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRKAADINSFKDLPPEIPLQLVIG 312

Query: 718 SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           ++V A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE 
Sbjct: 313 TKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTHSVPDYEVLSNEP----PET 368

Query: 775 LRRQISADKF 784
           +     A KF
Sbjct: 369 ISVASFAQKF 378


>gi|66504577|ref|XP_394339.2| PREDICTED: protein lin-9 homolog [Apis mellifera]
          Length = 623

 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 47/190 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEW 687
           +L   L      +W  +EWFYS ID   F  + +F+  L        P     +LTRVEW
Sbjct: 197 RLRNLLKLPKAHKWVCYEWFYSNIDKTLFEGDNDFMICLKE----SFPQLKTRKLTRVEW 252

Query: 688 GVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE--------------------- 717
             IR  +GKPRR S+ F            ++ ++ Q R+                     
Sbjct: 253 CKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRKAADINSFKDLPPEIPLQLVIG 312

Query: 718 SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           ++V A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE 
Sbjct: 313 TKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTHSVPDYEVLSNEP----PET 368

Query: 775 LRRQISADKF 784
           +     A KF
Sbjct: 369 ISVASFAQKF 378


>gi|340710503|ref|XP_003393827.1| PREDICTED: LOW QUALITY PROTEIN: protein lin-9 homolog [Bombus
           terrestris]
          Length = 622

 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 47/190 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEW 687
           +L   L      +W  +EWFYS ID   F  + +F+  L        P     +LTRVEW
Sbjct: 196 RLRNLLKLPKAHKWVCYEWFYSNIDKTLFEGDNDFMICLKE----SFPQLKTRKLTRVEW 251

Query: 688 GVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE--------------------- 717
             IR  +GKPRR S+ F            ++ ++ Q R+                     
Sbjct: 252 CKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRKAADINSFKDLPPEIPLQLVIG 311

Query: 718 SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           ++V A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE 
Sbjct: 312 TKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTHSVPDYEVLSNEP----PET 367

Query: 775 LRRQISADKF 784
           +     A KF
Sbjct: 368 ISVASFAQKF 377


>gi|307206493|gb|EFN84519.1| Lin-9-like protein [Harpegnathos saltator]
          Length = 623

 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 47/190 (24%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWF-SNREFVEYLNHVGLGHIP-----RLTRVEW 687
           +L   L      +W  +EWFYS ID   F  + +F+  L        P     +LTRVEW
Sbjct: 198 RLRNLLKLPKAHKWVCYEWFYSNIDKILFDGDNDFMICLKE----SFPQLKTRKLTRVEW 253

Query: 688 GVIRSSLGKPRRLSKRFL---------HDEREKLKQYRE--------------------- 717
             IR  +GKPRR S+ F            ++ ++ Q R+                     
Sbjct: 254 CKIRRMMGKPRRCSQSFFEEERRELERKRQKIRMLQQRKAADINSYKDLPPEIPLQLVIG 313

Query: 718 SRVIAIHPKTRE-LHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNMPEA 774
           ++V A   K ++ L  GS+  +D  ++  R+ F+R  LG   V D + + + P    PE 
Sbjct: 314 TKVTARLRKPQDGLFTGSIDAVDTSNNTYRITFERAGLGTHSVPDYEVLSNEP----PET 369

Query: 775 LRRQISADKF 784
           +     A KF
Sbjct: 370 ISVASFAQKF 379


>gi|167523459|ref|XP_001746066.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775337|gb|EDQ88961.1| predicted protein [Monosiga brevicollis MX1]
          Length = 810

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 31/150 (20%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLG-HIPRLTR---- 684
           ++   L   L +    RW  +E+FY  +D          E +    LG H P L +    
Sbjct: 319 ALGRSLETALRNRPFLRWALYEFFYPPLDASLLKKEHSFEDV----LGQHFPNLLKQMRH 374

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRES-------------------RVIAIHP 725
            EW  ++  LG+PRR S  F+  +R+ + Q + +                   +VIA HP
Sbjct: 375 FEWFAVKRQLGRPRRFSAHFVQQQRQDMSQSKSTLLESMHDNPQMPSLFCVGDQVIARHP 434

Query: 726 KTRELHDGSV---LTIDHDKCRVQFDRPEL 752
            ++ +    V   +T   +  RV F RP+L
Sbjct: 435 LSKGILSPGVVVAVTAAQNLYRVSFTRPQL 464


>gi|322783263|gb|EFZ10847.1| hypothetical protein SINV_03220 [Solenopsis invicta]
          Length = 663

 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)

Query: 543 SAQSKQWKPGRVLEGSSVNDQNRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLS 602
           +A++KQ  P +++  S V  Q + S    + +  +  A+P ++P K +  ++ D   +L+
Sbjct: 169 AAEAKQ-SPKKMMRPSPVKRQAKISSTPKSTSSSSQPATPVTTPVKQE--KEPDKIAQLA 225

Query: 603 SKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWF 662
           S + K  +                    +  +L   L      +W  +EWFYS ID   F
Sbjct: 226 SPDRKIGQK-------------------IGMRLRNLLKLPKAHKWVCYEWFYSNIDKILF 266

Query: 663 -SNREFVEYLNHVGLGHIP-----RLTRVEWGVIRSSLGKPRRLSKRFL 705
             + +F+  L        P     +LTRVEW  IR  +GKPRR S+ F 
Sbjct: 267 EGDNDFMICLKE----SFPQLKTRKLTRVEWCKIRRMMGKPRRCSQSFF 311


>gi|76156572|gb|AAX27757.2| SJCHGC04161 protein [Schistosoma japonicum]
          Length = 241

 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIP--RLTRVEWGVIR 691
           +L   L      +W  +EWFYS +D P                 ++   RL+R  W ++R
Sbjct: 100 RLRNVLKLPKAHKWVFYEWFYSNLDRPLLLGENDFRICLRESFPNVKTRRLSRAHWSLLR 159

Query: 692 SSLGKPRRLSKRFLHDEREKLKQYRE 717
             +GKPRR S  F  +ER  L + RE
Sbjct: 160 RLMGKPRRCSTAFFDEERRSLNEKRE 185


>gi|170054222|ref|XP_001863027.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167874547|gb|EDS37930.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 631

 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 41/176 (23%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNRE-----FVEYLNHVGLGHIPRLTRVEWG 688
           +L   L      ++ ++EWFYS ID   F           E    +   H   LTR EW 
Sbjct: 188 RLRNLLKLPKAHKFVSYEWFYSNIDRALFEGENDFQLCMREMYPDLKTRH---LTRAEWN 244

Query: 689 VIRSSLGKPRRLSKRFL---------HDEREKLKQYRES--------------------- 718
            IR ++GKPRR S  F            ++ +L Q + S                     
Sbjct: 245 HIRKTMGKPRRCSVAFFAEERRELERKRQKIRLLQTKRSGDVSFVRDLPKEIPQPLSVGT 304

Query: 719 RVIA-IHPKTRELHDGSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPLDNM 771
           +V A +      L  G+V  ID      RV FDRP LG   + D + + ++ LD +
Sbjct: 305 KVTARLRAPQDGLFTGTVEAIDVIASSYRVSFDRPGLGSHTIPDFEVVANDTLDKI 360


>gi|312385740|gb|EFR30165.1| hypothetical protein AND_00395 [Anopheles darlingi]
          Length = 560

 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 52/232 (22%)

Query: 624 QEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHI--PR 681
           ++ +  ++  +L   L      R+  FEW Y+ ID   +++ +  + L       +    
Sbjct: 147 EKKKYYALGWQLKNFLRLPKANRFVFFEWLYADIDRHLYTSPKSYQQLVRERFPKLKTTN 206

Query: 682 LTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE------------------------ 717
           LTRVEW  +RSS GKPR  S  F+  ER  L   RE                        
Sbjct: 207 LTRVEWTHVRSSFGKPRLFSAAFIAQERADLFSKREKIRVVQGNNLCDQSFSEGLPKSIP 266

Query: 718 ------SRVIA-IHPKTRE-LHDGSVLTIDHDK-C-RVQFDRPELGVEFVMDID----SM 763
                 +RV+A ++  T +   DG+V   D +K C R+ FD+P +    V D +    ++
Sbjct: 267 RRIPEGARVVARLYGGTNDGAFDGTVDEYDEEKRCYRIIFDKPTIKPCLVPDYEVSSATV 326

Query: 764 PSN-PLDNMPEALRRQISADKFSAI----------SKELQVN-GHPNFGSPM 803
           PS   L+++ +  R  +    F             S +++ N   P FG PM
Sbjct: 327 PSTIKLNSITKDYREALRDASFHVTERPKRKPRKESHKMKPNIDEPTFGGPM 378


>gi|380806661|gb|AFE75206.1| protein lin-9 homolog, partial [Macaca mulatta]
          Length = 124

 Score = 49.7 bits (117), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 681 RLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
           +LTRVEWG IR  +GKPRR S  F  +ER  LKQ R+
Sbjct: 18  KLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQ 54


>gi|45549300|ref|NP_569958.2| Myb-interacting protein 130 [Drosophila melanogaster]
 gi|45446779|gb|AAF45694.3| Myb-interacting protein 130 [Drosophila melanogaster]
 gi|55926022|gb|AAV68084.1| Myb-interacting protein 130 [Drosophila melanogaster]
 gi|60678099|gb|AAX33556.1| LD07342p [Drosophila melanogaster]
 gi|220950388|gb|ACL87737.1| CG3480-PA [synthetic construct]
          Length = 986

 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTR 684
           S+  +L   L      +W   EWFYS +D P F  R+  E++NHV      LG    L R
Sbjct: 288 SIGLRLRNLLKLPKAHKWAIAEWFYSYVDKPLFECRD--EFMNHVNELAPRLG-TRSLIR 344

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
            EW  IR  +G+PRR S +F  +ER++L + R+
Sbjct: 345 HEWVNIRRRMGRPRRCSAKFFSEERKELDRKRQ 377


>gi|194912771|ref|XP_001982570.1| GG12891 [Drosophila erecta]
 gi|190648246|gb|EDV45539.1| GG12891 [Drosophila erecta]
          Length = 930

 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 44/184 (23%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTR 684
           S+  +L   L      +W   EWFYS ID P F  R+  E++NHV      LG    L R
Sbjct: 277 SIGLRLRNLLKLPKAHKWAIAEWFYSYIDKPLFECRD--EFINHVNELAPRLG-TRSLNR 333

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLK---------------QYRESRVIAIHP---- 725
            EW  IR  +G+PRR S  F  +ER++L                ++++S +++  P    
Sbjct: 334 HEWVNIRRRMGRPRRCSANFFSEERKELDRKRQLMRTLQSRKPGEFKDSMLLSGMPEKIP 393

Query: 726 -----------KTRELHD----GSVLTID--HDKCRVQFDRPELGVEFVMDIDSMPSNPL 768
                      + R   D    G+V   D  +   RV F+RP LG   + D + +  N  
Sbjct: 394 MPLPLGTKVTARLRTPQDGIFAGTVAAYDSLNAMYRVTFERPGLGTHAIPDYEIVSENFH 453

Query: 769 DNMP 772
           + +P
Sbjct: 454 EMLP 457


>gi|195438697|ref|XP_002067269.1| GK16330 [Drosophila willistoni]
 gi|194163354|gb|EDW78255.1| GK16330 [Drosophila willistoni]
          Length = 965

 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTR 684
           S+  +L   L      +W   EWFYS ID P F  ++  E++NHV      LG   +L R
Sbjct: 324 SIGLRLRNLLKLPKAHKWAIAEWFYSYIDKPLFDCKD--EFMNHVSELAPRLG-TRKLNR 380

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
            EW  IR  +G+PRR S  F  +ER++L + R+
Sbjct: 381 HEWVNIRRRMGRPRRCSANFFSEERKELDRKRQ 413


>gi|195554054|ref|XP_002076825.1| GD24729 [Drosophila simulans]
 gi|194202843|gb|EDX16419.1| GD24729 [Drosophila simulans]
          Length = 894

 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTR 684
           S+  +L   L      +W   EWFYS +D P F  R+  E++NHV      LG    L R
Sbjct: 207 SIGLRLRNLLKLPKAHKWAIAEWFYSYVDKPLFECRD--EFMNHVNELAPRLG-TRSLIR 263

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
            EW  IR  +G+PRR S +F  +ER++L + R+
Sbjct: 264 HEWMNIRRRMGRPRRCSAKFFSEERKELDRKRQ 296


>gi|2749752|emb|CAA15930.1| EG:86E4.4 [Drosophila melanogaster]
          Length = 851

 Score = 48.5 bits (114), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTR 684
           S+  +L   L      +W   EWFYS +D P F  R+  E++NHV      LG    L R
Sbjct: 153 SIGLRLRNLLKLPKAHKWAIAEWFYSYVDKPLFECRD--EFMNHVNELAPRLG-TRSLIR 209

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
            EW  IR  +G+PRR S +F  +ER++L + R+
Sbjct: 210 HEWVNIRRRMGRPRRCSAKFFSEERKELDRKRQ 242


>gi|195477894|ref|XP_002100336.1| GE16223 [Drosophila yakuba]
 gi|194187860|gb|EDX01444.1| GE16223 [Drosophila yakuba]
          Length = 942

 Score = 48.5 bits (114), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTR 684
           S+  +L   L      +W   EWFYS ID P F  R+  E++NHV      LG    L R
Sbjct: 281 SIGLRLRNLLKLPKAHKWAIAEWFYSYIDKPLFECRD--EFMNHVNELAPRLG-TRSLNR 337

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRE 717
            EW  IR  +G+PRR S  F  +ER++L + R+
Sbjct: 338 HEWVNIRRRMGRPRRCSANFFSEERKELDRKRQ 370


>gi|194767842|ref|XP_001966023.1| GF19452 [Drosophila ananassae]
 gi|190622908|gb|EDV38432.1| GF19452 [Drosophila ananassae]
          Length = 992

 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 73/184 (39%), Gaps = 44/184 (23%)

Query: 630 SMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNREFVEYLNHVG-----LGHIPRLTR 684
           S+  +L   L      +W   EWFYS ID P F   +  E++NHV      LG   +L R
Sbjct: 297 SIGLRLRNLLKLPKAHKWAIAEWFYSYIDKPLFDCGD--EFMNHVNELAPRLG-TRKLNR 353

Query: 685 VEWGVIRSSLGKPRRLSKRFLHDEREKLKQYRESRVIAIHPKTRELHDGSVLTIDHDKC- 743
            EW  IR  +G+PRR S  F ++ER +L + R+        K  E  D  +L+   DK  
Sbjct: 354 HEWVSIRRRMGRPRRCSANFFNEERRELDRKRQLIRTLQSRKPGEFKDSVLLSDMPDKIP 413

Query: 744 -----------------------------------RVQFDRPELGVEFVMDIDSMPSNPL 768
                                              RV F+RP LG   + D + +  N  
Sbjct: 414 MPLPLGTKVTARLRTPQDGIFAGTVAAYDSLNAMYRVTFERPGLGTHAIPDYEIVSENFH 473

Query: 769 DNMP 772
           + +P
Sbjct: 474 EMLP 477


>gi|157110621|ref|XP_001651178.1| hypothetical protein AaeL_AAEL005631 [Aedes aegypti]
 gi|108878648|gb|EAT42873.1| AAEL005631-PA [Aedes aegypti]
          Length = 656

 Score = 47.4 bits (111), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 634 KLSGCLSSNMVRRWCTFEWFYSAIDYPWFSNR-EFVEYLNHVGLGHIPR-LTRVEWGVIR 691
           +L   L      ++ ++EWFYS ID   F    +F   L  +      R LTR EW  IR
Sbjct: 199 RLRNLLKLPKAHKFVSYEWFYSNIDRALFEGENDFQMCLREMYPDLKTRHLTRAEWNRIR 258

Query: 692 SSLGKPRRLSKRF 704
            ++GKPRR S  F
Sbjct: 259 RTMGKPRRCSAAF 271


>gi|219110987|ref|XP_002177245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411780|gb|EEC51708.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 837

 Score = 46.6 bits (109), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 31/147 (21%)

Query: 644 VRRWCTFEWFYSAIDYPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSL----GKPRR 699
            R W + E+FYS +D  W+++    +     G+     L   EW  +R +L     KPRR
Sbjct: 511 ARTWVSHEFFYSDLDKAWYNSSALSKMARRFGVDPTISLDSAEWKCVRRALHGIKAKPRR 570

Query: 700 LSKRFLHDEREKLKQYRE-------------------------SRVIAIHPKTRELHDGS 734
            S+ F+ ++  +  ++R                          S V A       L  G+
Sbjct: 571 FSRCFISEQLHERDEFRSGVRLLQQNLGASHAAYDLKSCIPVGSVVTAYSQTFGMLQRGT 630

Query: 735 VLTIDHDKCR--VQFDRPELGVEFVMD 759
           VLT +       V+F+  + G E+  D
Sbjct: 631 VLTFEARNAHYLVRFENMDFGYEYCPD 657


>gi|308801118|ref|XP_003075340.1| unnamed protein product [Ostreococcus tauri]
 gi|116061894|emb|CAL52612.1| unnamed protein product, partial [Ostreococcus tauri]
          Length = 675

 Score = 43.9 bits (102), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 41  GPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSL 91
           GP+W+  E  +F      YGKD+  +++ +R RS + V+  Y  NR  + L
Sbjct: 618 GPEWTDMEKTKFVSGLLQYGKDFVAISSTIRTRSLDAVQQFYEDNRELMDL 668


>gi|307197024|gb|EFN78396.1| Nuclear receptor corepressor 2 [Harpegnathos saltator]
          Length = 1436

 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 36  LSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSL 91
           ++D +  QW++ EL+   +A R +G +W KVA Q+  ++    +  Y  NR  LSL
Sbjct: 165 VADLMSRQWTEEELELLRKALREHGTNWLKVAEQIPGKTNHQCKNYYFANRKKLSL 220


>gi|219117587|ref|XP_002179586.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408639|gb|EEC48572.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1158

 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 24/32 (75%)

Query: 43  QWSKGELQRFYEAYRNYGKDWKKVAAQVRNRS 74
           +W+K E + F  A + YGK+WKKVAA+V+ R+
Sbjct: 113 RWTKAEHEAFLSALQTYGKEWKKVAAKVKTRT 144


>gi|195337000|ref|XP_002035121.1| GM14091 [Drosophila sechellia]
 gi|194128214|gb|EDW50257.1| GM14091 [Drosophila sechellia]
          Length = 561

 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 17/203 (8%)

Query: 519 TLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQ---NRASIDLVAPTG 575
           T++SE    E N+F +     S  +    Q K  R +  +  ND+    R   D  +   
Sbjct: 7   TIQSEIC--EENEFLANIGLLSTTTMSRHQLKKPRKMVAAWQNDELFIQRPDFDNRSRIS 64

Query: 576 QAPVASPASSPTKHQSRRKMDLKRKLSSKEMKFSENSLKTQPNKNSLSQEDRLLSMKEKL 635
           + P     + P +  S+R  +  +K S   +  SE+  + +  ++  S +     + ++L
Sbjct: 65  EKPAMQVRTKP-EGSSKRTANFTKKPSKISVAVSEDEKEMEKEQDHYSND---FILGKRL 120

Query: 636 SGCLSSNMVRRWCTFEWFYSAIDYPWFS-----NREFVEYLNHVGLGHIPRLTRVEWGVI 690
              L      RW   E+  S +D P  +      R   EY     L H   + R  W ++
Sbjct: 121 YNFLKYLSSHRWIWCEFVDSFLDKPTLTMGYDMKRFIAEY---CPLLHSCFMPRRGWQLV 177

Query: 691 RSSLGKPRRLSKRFLHDEREKLK 713
           R ++GK RR S  F+  ERE+L+
Sbjct: 178 RRNMGKARRFSPAFIELEREELE 200


>gi|367016563|ref|XP_003682780.1| hypothetical protein TDEL_0G02020 [Torulaspora delbrueckii]
 gi|359750443|emb|CCE93569.1| hypothetical protein TDEL_0G02020 [Torulaspora delbrueckii]
          Length = 588

 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 26  SPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           SP+  K+ K L D    QW++ ELQ+  +  + YG DW KVA ++ N++ E
Sbjct: 292 SPNPVKRAKVLED-TSVQWTREELQKLLKGLQEYGSDWYKVAKEIDNKTPE 341


>gi|403358096|gb|EJY78684.1| Myb-like DNA-binding domain, SHAQKYF class family protein
           [Oxytricha trifallax]
          Length = 659

 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 22  KDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEA 80
           +D  S  K   + ++  K   +W+K E ++F +A R YGKDW+KV   V+ RS   + +
Sbjct: 112 EDFSSKKKKVTQAQMLGKTAGRWTKEEHKKFVQAIRLYGKDWRKVEDFVKTRSGAQIRS 170


>gi|345490536|ref|XP_001606072.2| PREDICTED: hypothetical protein LOC100122466 [Nasonia vitripennis]
          Length = 2618

 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%)

Query: 37   SDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSL 91
            +D +G QWS  EL++  +A R +G +W KV+ Q+  +S    +  Y   R  L L
Sbjct: 1282 ADAIGRQWSDEELEQLRKALREHGTNWPKVSEQIAGKSNHQCKNYYLTYRKKLGL 1336


>gi|299471100|emb|CBN78959.1| histone deactylase of possible bacterial origin with ankyrin
           repeats at the N-terminus [Ectocarpus siliculosus]
          Length = 2197

 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 21/130 (16%)

Query: 43  QWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLI 102
           +W+K E + F  A + YGK+WK+VA  VR R+  +V+   +  + +  L +  A   G I
Sbjct: 750 RWTKAEHELFLRALKKYGKEWKRVACMVRTRT--VVQTRTHAQKYFQKLTKAAAG--GGI 805

Query: 103 AM----------MTDHYNVMEGSDSERESNDASEMPRKSQKRKRAKVQLSASKEDISQSW 152
           ++          +  H N ++ S    ++ +A   PR     KR++   S S    SQ  
Sbjct: 806 SLEDGEGPDLMDIEVHMNTIDPS----QATNAGSAPRTRGGAKRSRAGTSTSP---SQHP 858

Query: 153 SMAATGGCLS 162
             A TG   S
Sbjct: 859 PAAGTGSATS 868


>gi|145343942|ref|XP_001416502.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576727|gb|ABO94795.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1189

 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 41  GPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVG 100
           GP+W+  E  +F      YGKD+  +++ +R RS + V+  Y  NR  +       S+VG
Sbjct: 722 GPEWTDMEKTKFVSGLLQYGKDFVAISSTIRTRSLDAVKQFYEDNRELMDFD----SLVG 777

Query: 101 LIAMMT 106
             ++ T
Sbjct: 778 ETSVAT 783


>gi|66359998|ref|XP_627177.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain
            [Cryptosporidium parvum Iowa II]
 gi|46228591|gb|EAK89461.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain
            [Cryptosporidium parvum Iowa II]
          Length = 1308

 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 44   WSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMN-RAYLSLPEGTASVVGLI 102
            W+KG+ QRF  A   YG D   +   + N+S E V   YN+  + Y  LP G   ++G I
Sbjct: 996  WTKGDFQRFCRAAELYGSDLHSITDSMENKSFEEVSRYYNVFLKRYKELP-GGERIMGRI 1054

Query: 103  AM 104
             M
Sbjct: 1055 KM 1056


>gi|67606806|ref|XP_666775.1| chromatin remodelling complex protein SNF2L [Cryptosporidium hominis
            TU502]
 gi|54657830|gb|EAL36543.1| chromatin remodelling complex protein SNF2L [Cryptosporidium hominis]
          Length = 1292

 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 44   WSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMN-RAYLSLPEGTASVVGLI 102
            W+KG+ QRF  A   YG D   +   + N+S E V   YN+  + Y  LP G   ++G I
Sbjct: 996  WTKGDFQRFCRAAELYGSDLHSITDSMENKSFEEVSRYYNVFLKRYKELP-GGERIMGRI 1054

Query: 103  AM 104
             M
Sbjct: 1055 KM 1056


>gi|401625188|gb|EJS43209.1| swi3p [Saccharomyces arboricola H-6]
          Length = 817

 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 15  ANEVSPAKDVISPSKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRS 74
           A+E    KD  SP    +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S
Sbjct: 492 ADESLLEKDETSPPL--KKIKILEQIDKNWSKEDLQKLLKGIQEFGADWYKVAKHVGNKS 549

Query: 75  AE 76
            E
Sbjct: 550 PE 551


>gi|349579029|dbj|GAA24192.1| K7_Swi3p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query: 28  SKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           S+  +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 511 SRPLKKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|6322286|ref|NP_012359.1| Swi3p [Saccharomyces cerevisiae S288c]
 gi|417834|sp|P32591.1|SWI3_YEAST RecName: Full=SWI/SNF complex subunit SWI3; AltName:
           Full=Transcription factor TYE2; AltName:
           Full=Transcription regulatory protein SWI3
 gi|4635|emb|CAA40112.1| transcription factor for TY and TY mediated gene expression
           [Saccharomyces cerevisiae]
 gi|172800|gb|AAA35136.1| nuclear protein [Saccharomyces cerevisiae]
 gi|1008373|emb|CAA89470.1| SWI3 [Saccharomyces cerevisiae]
 gi|285812731|tpg|DAA08629.1| TPA: Swi3p [Saccharomyces cerevisiae S288c]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query: 28  SKSKQKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           S+  +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 511 SRPLKKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|190409337|gb|EDV12602.1| transcription regulatory protein SWI3 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 515 KKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|403341762|gb|EJY70197.1| hypothetical protein OXYTRI_09058 [Oxytricha trifallax]
          Length = 816

 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 44  WSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIA 103
           W+K E  RF EA + +G++W+KV   V+ RS+   +A  +  + ++ +      V   I 
Sbjct: 294 WTKQEHCRFLEALKKHGRNWRKVQQHVQTRSS--TQARSHAQKFFVKIERKGQKVEEFIK 351

Query: 104 MMTDHYNV------MEGSDSERESNDAS 125
            + D  N+      M G D E E+ND++
Sbjct: 352 QL-DVTNIEDMPDEMIGFDGEDEANDST 378


>gi|151944955|gb|EDN63210.1| transcription factor [Saccharomyces cerevisiae YJM789]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 515 KKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|365764890|gb|EHN06408.1| Swi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 515 KKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|290771060|emb|CAY80609.2| Swi3p [Saccharomyces cerevisiae EC1118]
 gi|323332949|gb|EGA74351.1| Swi3p [Saccharomyces cerevisiae AWRI796]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 515 KKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|256271339|gb|EEU06404.1| Swi3p [Saccharomyces cerevisiae JAY291]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 515 KKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|207344145|gb|EDZ71379.1| YJL176Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|392298592|gb|EIW09689.1| Swi3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 825

 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 32  QKKKLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAE 76
           +K K+ +++   WSK +LQ+  +  + +G DW KVA  V N+S E
Sbjct: 515 KKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPE 559


>gi|83940037|gb|ABC48778.1| always early [Drosophila simulans]
          Length = 534

 Score = 41.2 bits (95), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 15/174 (8%)

Query: 548 QWKPGRVLEGSSVNDQ---NRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSK 604
           Q K  R +  +  ND+   NR   D  +   + P     + P +  S+R  +  +KLS  
Sbjct: 5   QLKKPRKMVAAWQNDELFINRPDFDNRSRISEKPAIQVRTKP-EGSSKRTANFTKKLSKI 63

Query: 605 EMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFS- 663
            +   E+  + +  ++  S +     + ++L   L      RW   E+  S +D P  + 
Sbjct: 64  SVAVLEDEKEMEKEQDPYSND---FILGKRLYNFLKYLSSHRWIWCEFVDSFLDKPTLTM 120

Query: 664 ----NREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLK 713
                R   EY     L H   + R  W ++R ++GK RR S  F+  ERE+L+
Sbjct: 121 GYDMKRFIAEY---CPLLHSCFMPRRGWQLVRRNMGKARRFSPAFIELEREELE 171


>gi|83940041|gb|ABC48780.1| always early [Drosophila simulans]
          Length = 534

 Score = 41.2 bits (95), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 15/174 (8%)

Query: 548 QWKPGRVLEGSSVNDQ---NRASIDLVAPTGQAPVASPASSPTKHQSRRKMDLKRKLSSK 604
           Q K  R +  +  ND+   NR   D  +   + P     + P +  S+R  +  +KLS  
Sbjct: 5   QLKKPRKMVAAWQNDELFINRPDFDNRSRISEKPAIQVRTKP-EGSSKRTANFTKKLSKI 63

Query: 605 EMKFSENSLKTQPNKNSLSQEDRLLSMKEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFS- 663
            +   E+  + +  ++  S +     + ++L   L      RW   E+  S +D P  + 
Sbjct: 64  SVAVLEDEKEMEKEQDPYSND---FILGKRLYNFLKYLSSHRWIWCEFVDSFLDKPTLTM 120

Query: 664 ----NREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSKRFLHDEREKLK 713
                R   EY     L H   + R  W ++R ++GK RR S  F+  ERE+L+
Sbjct: 121 GYDMKRFIAEY---CPLLHSCFMPRRGWQLVRRNMGKARRFSPAFIELEREELE 171


>gi|195018147|ref|XP_001984731.1| GH16628 [Drosophila grimshawi]
 gi|193898213|gb|EDV97079.1| GH16628 [Drosophila grimshawi]
          Length = 501

 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 12/77 (15%)

Query: 647 WCTFEWFYSAID-------YPWFSNREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRR 699
           W  +E+  S ID       + W  N   V YL  +      +++R  W VIR SLGK RR
Sbjct: 98  WIWYEFNESTIDKAILASTFDW--NDYLVNYLQEL---ETRQMSRHCWQVIRRSLGKARR 152

Query: 700 LSKRFLHDEREKLKQYR 716
            S  F+  ER  L++ R
Sbjct: 153 FSPAFIELERNMLEENR 169


>gi|118371692|ref|XP_001019044.1| myb-like DNA-binding domain, SHAQKYF class family protein
           [Tetrahymena thermophila]
 gi|89300811|gb|EAR98799.1| myb-like DNA-binding domain, SHAQKYF class family protein
           [Tetrahymena thermophila SB210]
          Length = 682

 Score = 40.8 bits (94), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 28/46 (60%)

Query: 35  KLSDKLGPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEA 80
           K+S+K   +W+K E ++F E  + YG++WKKV   +  R+   + +
Sbjct: 132 KVSNKTSGRWTKDEHKKFIEGIQKYGRNWKKVEEHIGTRTGAQIRS 177


>gi|383771026|ref|YP_005450089.1| hypothetical protein S23_27650 [Bradyrhizobium sp. S23321]
 gi|381359147|dbj|BAL75977.1| hypothetical protein S23_27650 [Bradyrhizobium sp. S23321]
          Length = 147

 Score = 40.8 bits (94), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 41 GPQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYN 83
          G +WS  E+++   A  +YG DWK VAAQ+  R+ E  +  YN
Sbjct: 7  GDKWSVEEIEKLCAAVEHYGADWKNVAAQMPGRTVEACKQAYN 49


>gi|357117580|ref|XP_003560543.1| PREDICTED: uncharacterized protein LOC100834369 [Brachypodium
           distachyon]
          Length = 481

 Score = 40.4 bits (93), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 9/103 (8%)

Query: 11  NKRYANEVSPAKDVISPSKSKQKKKLSDKLGPQ--WSKGELQRFYEAYRNYGKDWKKVAA 68
           N+++ NE     +   P   K+ +K      P+  WS  E +RF +A   +G+DWKK+  
Sbjct: 189 NEQFINEQHKNMEQTPPGAGKKARKPYTITRPRERWSPDEHERFLDAMLRFGRDWKKIEE 248

Query: 69  QVRNRSAEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNV 111
            VR ++   + +  +  + +L + +     +GL A +  H+ +
Sbjct: 249 HVRTKTTVQIRS--HAQKYFLKVQK-----LGLAAGLPPHHPI 284


>gi|363893020|ref|ZP_09320161.1| hypothetical protein HMPREF9630_00772 [Eubacteriaceae bacterium
           CM2]
 gi|361961823|gb|EHL14994.1| hypothetical protein HMPREF9630_00772 [Eubacteriaceae bacterium
           CM2]
          Length = 376

 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 266 AHPDAREALNEEG-CPEARILNRRPENGAY----TRARKSLMDMEGVGTVEVHRKGKKFY 320
           +H      LN  G C +A  L  R  N  Y    +R RK++   +GV T ++H + KK  
Sbjct: 133 SHNKKSRILNLTGSCQDADYLEDRVVNDVYNYMNSRIRKAIDTWDGVLTEKLHIENKKLL 192

Query: 321 RKKMKVEEVRNSLSDDEGEACSGTEEGLSSRKGKVGSEISNAKNDHLPLQMQ---RKRSK 377
             +  +EE  N+L D  GE     EE       K+ +E+     +   L+M+   + +S 
Sbjct: 193 SNQSAIEEENNNLYDIFGEQLEKMEES----NVKLSNEVQRLNAELQGLRMRYSDKDKSP 248

Query: 378 KLFFGDE 384
            L+ GDE
Sbjct: 249 VLYLGDE 255


>gi|145478477|ref|XP_001425261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392330|emb|CAK57863.1| unnamed protein product [Paramecium tetraurelia]
          Length = 339

 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 28 SKSKQKKKLSDKLGP----QWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMV 78
          +K KQ K L D  G     +W K E QRF EA   +GK+WKKV   V  RS   +
Sbjct: 5  NKRKQSKSLDDSEGEAVQGRWIKEEHQRFVEALSLHGKNWKKVEEYVGTRSGAQI 59


>gi|145496250|ref|XP_001434116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401239|emb|CAK66719.1| unnamed protein product [Paramecium tetraurelia]
          Length = 344

 Score = 40.0 bits (92), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 28 SKSKQKKKLSDKLGP----QWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMV 78
          +K KQ K L D  G     +W K E QRF EA   +GK+WKKV   V  RS   +
Sbjct: 5  NKRKQSKSLDDSEGEVVQGRWVKEEHQRFVEALSLHGKNWKKVEEYVGTRSGAQI 59


>gi|195587330|ref|XP_002083418.1| aly [Drosophila simulans]
 gi|194195427|gb|EDX09003.1| aly [Drosophila simulans]
          Length = 568

 Score = 39.7 bits (91), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 25/207 (12%)

Query: 519 TLESEAVAEEHNKFASKGKRTSQNSAQSKQWKPGRVLEGSSVNDQ---NRASIDLVAPTG 575
           T++SE    E N+F +     S  +    Q K  R +  +  ND+   NR   D  +   
Sbjct: 12  TIQSEIC--EENEFLANIGLLSTTTMSRHQLKKPRKMVAAWQNDELFINRPDFDNRSRIS 69

Query: 576 QAPVASPASSPTKHQSRRKMDLKRK---LSSKEMKFSENSLKTQ-PNKNSLSQEDRLLSM 631
           + P     + P +  S+R  +  +K   +S   ++  +   K Q P  N      RL + 
Sbjct: 70  EKPAMQVRTKP-EGSSKRTANFTKKPSKISVAVLEEEKEMEKEQDPYSNDFILGKRLYNF 128

Query: 632 KEKLSGCLSSNMVRRWCTFEWFYSAIDYPWFS-----NREFVEYLNHVGLGHIPRLTRVE 686
            + LS         RW   E+  S +D P  +      R   EY     L H   + R  
Sbjct: 129 LKYLSS-------HRWIWCEFVDSFLDKPTLTMGYDMKRFIAEY---CPLLHSCFMPRRG 178

Query: 687 WGVIRSSLGKPRRLSKRFLHDEREKLK 713
           W ++R ++GK RR S  F+  ERE+L+
Sbjct: 179 WQLVRRNMGKARRFSPAFIELEREELE 205


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.312    0.126    0.358 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,454,924,238
Number of Sequences: 23463169
Number of extensions: 716782360
Number of successful extensions: 1874386
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 2663
Number of HSP's that attempted gapping in prelim test: 1863508
Number of HSP's gapped (non-prelim): 11247
length of query: 1172
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 1018
effective length of database: 8,745,867,341
effective search space: 8903292953138
effective search space used: 8903292953138
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 83 (36.6 bits)